Citrus Sinensis ID: 017457

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-
Protein Sequence
MQRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWMDKLI
Secondary Structure (PSIPRED)
cccccccccEEEEEEEccccccEEEEEEEEEccccccHHHHccccccccccccEEccccccEEEEEEcccccccccccEEEEEcccccccccccccccccccccccccccccccccccccccccccEEEEEEEcccccccEEEEEccEEEEEccccccccEEEEccccccccccEEEEcccccccEEEEEcccHHHHHHHHHHHHccccEEEEEEcccccHHHHHHccccEEEcccccccccHHHHHHHHHcccccEEEEccccHHHHHHHHHHccccccEEEEEEEccccccEEEcccccccccEEEEEEcccccccccHHHHHHHHHcccccccccEEccccHHHHHHHHHHHHccccEEEEEEccccc
Secondary Structure Prediction (SSPRO)
cccccccccEEEEEEEccccccEEEEEEEEEEccHHHHHHHccccccccccccEccccEEEEEEEEEcccccccccccEEEEcccccccccHHHHccccccccccHHHHHccccccccccEEEcccEEEEccccccccEcEEEEEHHHEEEccccccHHHHHHHHcHHHHHHHHHHcccccccccEEEEEcccHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHccccEEEcHcccccccHHHHHHHHccccEcEEEEccccHHHHHHHHHcEcccccEEEEcccccccccEEEEHHHHHcccEEEEccHHHccHHHHHHHHHHHHHcccccHHHHccEEEEHHHHHHHHHHHHccccccEEEEEHHcc
Coil and Loop (DISEMBL)
mqripgkplvieeieveppkAWEIRIKILCTSlchsdvtfwksstdlpklplpvifgheAVGVVESVGEYVEEVKerdlvlpifhrdcgecrdckssksntcskfgrgyrpnmprdgtsRFRELKGDvihhflnissfteysvVDIThvvkitphipLGIACLLscgvstgvGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRaskiigvdinpekfeigkkfgitdfinpatcgdkTVSQVIKEMTDGGADYCFECIGLTSVMndafnssregwgKTVILGVEmhgspislnsIEILKgrsvcgtyfgglkprsdIATLAQKYLDKElnlgefithevsfHDINKAFDLLLEGKSLRCIIWMDKLI
Flexible Loop (DISEMBL)
mqripgkplvieeieveppKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIfhrdcgecrdckssksntcskfgrgyrpnmprdgTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNraskiigvdinpeKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWMDKLI
Low Complexity Region (SEG)
MQRIPGKPLvieeieveppKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFgheavgvvesvgeyveevkeRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFglgavglavaegaRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWMDKLI
Disordered region (IsUnstruct)
********LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDC**************************FRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWMD***
Disordered Region (DISOPRED)
MQRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWMDKLI
Disordered Region (DISEMBL)
MQRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWMDKLI
Disordered Region (DISPRO)
**R*PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWMDKL*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWMDKLI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	371	2.2.26 [Sep-21-2011]
Q9SK87	386	Alcohol dehydrogenase-lik	yes	no	0.986	0.948	0.657	1e-140
Q9SK86	388	Alcohol dehydrogenase-lik	no	no	0.986	0.943	0.644	1e-137
Q0V7W6	389	Alcohol dehydrogenase-lik	no	no	0.991	0.946	0.632	1e-136
Q9FH04	390	Alcohol dehydrogenase-lik	no	no	0.983	0.935	0.596	1e-126
P25141	382	Alcohol dehydrogenase 1 O	N/A	no	0.970	0.942	0.521	1e-101
Q8LEB2	381	Alcohol dehydrogenase-lik	no	no	0.962	0.937	0.513	1e-100
A2XAZ3	381	Alcohol dehydrogenase cla	N/A	no	0.967	0.942	0.505	4e-98
P14674	380	Alcohol dehydrogenase 2 O	N/A	no	0.967	0.944	0.513	6e-98
P14675	380	Alcohol dehydrogenase 3 O	N/A	no	0.967	0.944	0.513	7e-98
P14673	380	Alcohol dehydrogenase 1 O	N/A	no	0.967	0.944	0.513	7e-98

>sp|Q9SK87|ADHL2_ARATH Alcohol dehydrogenase-like 2 OS=Arabidopsis thaliana GN=At1g22440 PE=2 SV=1

 Score =  497 bits (1280), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 242/368 (65%), Positives = 295/368 (80%), Gaps = 2/368 (0%)

Query: 3   RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVG 62
           R  G+PLVIEEI+V+PP+A+E+RIKILCTSLCH+DVTFWK  +  P    P I GHEAVG
Sbjct: 20  RKAGEPLVIEEIQVDPPQAYEVRIKILCTSLCHTDVTFWKLDSG-PLARFPRILGHEAVG 78

Query: 63  VVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDG-TSRF 121
           VVES+GE V+  K+ D+VLP+FH  C EC++C S KSN C+K+   Y  N  R G TSRF
Sbjct: 79  VVESIGEKVDGFKQGDVVLPVFHPQCEECKECISPKSNWCTKYTNDYLSNTRRYGMTSRF 138

Query: 122 RELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGV 181
           ++ +G+ IHHF+ +SSFTEY+VVDI H+VKI+P IP+ IA LLSC V+TG+GAAWKVA V
Sbjct: 139 KDSRGEDIHHFIFVSSFTEYTVVDIAHLVKISPEIPVDIAALLSCSVATGLGAAWKVADV 198

Query: 182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 241
           E GSTV IFGLGAVGLAVAEG RL  A+KIIGVD+NP KFEIGK+FGITDF+NPA CG+K
Sbjct: 199 EEGSTVVIFGLGAVGLAVAEGVRLRGAAKIIGVDLNPAKFEIGKRFGITDFVNPALCGEK 258

Query: 242 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI 301
           T+S+VI+EMTD GADY FECIGL S+M +AF S+R G GKT++LG+E    PISL S ++
Sbjct: 259 TISEVIREMTDVGADYSFECIGLASLMEEAFKSTRPGSGKTIVLGMEQKALPISLGSYDL 318

Query: 302 LKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL 361
           L+GR+VCGT FGGLKP+ DI  L  +YL KELNL + ITHE+SF +INKAF LL EG S+
Sbjct: 319 LRGRTVCGTLFGGLKPKLDIPILVDRYLKKELNLEDLITHELSFEEINKAFHLLAEGNSI 378

Query: 362 RCIIWMDK 369
           RCIIWMDK
Sbjct: 379 RCIIWMDK 386

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 1

>sp|Q9SK86|ADHL1_ARATH Alcohol dehydrogenase-like 1 OS=Arabidopsis thaliana GN=At1g22430 PE=2 SV=1

 Score =  487 bits (1254), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 237/368 (64%), Positives = 292/368 (79%), Gaps = 2/368 (0%)

Query: 3   RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVG 62
           R  G+ LVIE+I V+PP+A+E+RIKILCTSLCH+D+TFWK S   P    P I GHEAVG
Sbjct: 22  RKAGEALVIEDIHVDPPQAYEVRIKILCTSLCHTDLTFWKLSFG-PISRFPRILGHEAVG 80

Query: 63  VVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDG-TSRF 121
           VVES+GE V+  K+ D+VLP+FH  C EC+DCKSSK+N C ++   +  N  R G  SRF
Sbjct: 81  VVESIGENVDGFKQGDVVLPVFHPYCEECKDCKSSKTNWCDRYAEDFISNTRRYGMASRF 140

Query: 122 RELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGV 181
           ++  G+VIHHFL +SSF+EY+VVDI H+VKI+P IP+  A LLSCGVSTG+GAAWKVA V
Sbjct: 141 KDSSGEVIHHFLFVSSFSEYTVVDIAHLVKISPEIPVDKAALLSCGVSTGIGAAWKVANV 200

Query: 182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 241
           E GST+AIFGLGAVGLAVAEGARL  A+KIIG+D N +KFE+GKKFG TDFINP  CG+K
Sbjct: 201 EEGSTIAIFGLGAVGLAVAEGARLRGAAKIIGIDTNSDKFELGKKFGFTDFINPTLCGEK 260

Query: 242 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI 301
            +S+VIKEMT+GG DY FEC+GL S++N+AF S+R G GKTV+LG+E H +PISL S ++
Sbjct: 261 KISEVIKEMTEGGVDYSFECVGLASLLNEAFISTRTGTGKTVMLGMEKHAAPISLGSFDL 320

Query: 302 LKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL 361
           L+GR +CG+ FGGLK + DI  L   YL KELNL  FITHE++F +INKAF LL EGKSL
Sbjct: 321 LRGRVICGSLFGGLKSKLDIPILVDHYLKKELNLDSFITHELNFKEINKAFALLEEGKSL 380

Query: 362 RCIIWMDK 369
           RCI+WMDK
Sbjct: 381 RCILWMDK 388

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|Q0V7W6|ADHL5_ARATH Alcohol dehydrogenase-like 5 OS=Arabidopsis thaliana GN=At4g22110 PE=2 SV=1

 Score =  483 bits (1244), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 234/370 (63%), Positives = 293/370 (79%), Gaps = 2/370 (0%)

Query: 1   MQRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEA 60
           + R PG+ LVIEEI V+PP+A+E+RIKI+CTSLCH+DV+F K  +  P    P I GHEA
Sbjct: 21  VSRKPGEALVIEEIHVDPPQAYEVRIKIICTSLCHTDVSFSKIDSG-PLARFPRILGHEA 79

Query: 61  VGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDG-TS 119
           VGV+ES+GE+V   ++ D+VLP+FH  C ECRDCKSSKSN C++F   +  N  R G TS
Sbjct: 80  VGVIESIGEHVNGFQQGDVVLPVFHPHCEECRDCKSSKSNWCARFADDFLSNTRRYGMTS 139

Query: 120 RFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVA 179
           RF++  G+ I+HFL +SSF+EY+VVDI H+VKI+P IP+  A LLSCGVSTG+GAAWKVA
Sbjct: 140 RFKDSFGEDIYHFLFVSSFSEYTVVDIAHLVKISPDIPVDKAALLSCGVSTGIGAAWKVA 199

Query: 180 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG 239
            VE GSTVA+FGLGAVGLAV EGARL  A KIIGVD+NPEKFE+GKKFG TDFIN   CG
Sbjct: 200 NVEKGSTVAVFGLGAVGLAVGEGARLRGAGKIIGVDLNPEKFELGKKFGFTDFINSTLCG 259

Query: 240 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI 299
           +  +S+VIKEMT GG DY FEC+GL S++ +AF+S+R G GKTV+LG++ H +P+SL S 
Sbjct: 260 ENKISEVIKEMTGGGVDYSFECVGLPSLLTEAFSSTRTGSGKTVVLGIDKHLTPVSLGSF 319

Query: 300 EILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGK 359
           ++L+GR VCG+ FGGLKP+ DI  L   YL KELNL  FITHE+ F +INKAFDLL++GK
Sbjct: 320 DLLRGRHVCGSLFGGLKPKLDIPILVDHYLKKELNLDSFITHELKFEEINKAFDLLVQGK 379

Query: 360 SLRCIIWMDK 369
           SLRCI+WM+K
Sbjct: 380 SLRCILWMNK 389

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|Q9FH04|ADHL7_ARATH Alcohol dehydrogenase-like 7 OS=Arabidopsis thaliana GN=At5g42250 PE=2 SV=1

 Score =  450 bits (1157), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 220/369 (59%), Positives = 280/369 (75%), Gaps = 4/369 (1%)

Query: 1   MQRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEA 60
           + R  G+PLV+EEI V PP+ +E+RI+I+CT+LCHSDVTFWK    +P    P I GHEA
Sbjct: 23  VSRKAGEPLVMEEIMVAPPQPFEVRIRIICTALCHSDVTFWK--LQVPPACFPRILGHEA 80

Query: 61  VGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR-DGTS 119
           +GVVESVGE V+EV E D VLP F  DCG+C DCKS KSN CSKF     P MPR D +S
Sbjct: 81  IGVVESVGENVKEVVEGDTVLPTFMPDCGDCVDCKSHKSNLCSKFPFKVSPWMPRYDNSS 140

Query: 120 RFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVA 179
           RF +L G+ + HFLN+SSF+EY+V+D+ +VVKI   IP   ACLLSCGVSTGVGAAW+ A
Sbjct: 141 RFTDLNGETLFHFLNVSSFSEYTVLDVANVVKIDSSIPPSRACLLSCGVSTGVGAAWETA 200

Query: 180 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG 239
            VE GSTV IFGLG++GLAVAEGARL  AS+IIGVDINP KF++G+KFG+T+F+N  TC 
Sbjct: 201 KVEKGSTVVIFGLGSIGLAVAEGARLCGASRIIGVDINPTKFQVGQKFGVTEFVNSMTCE 260

Query: 240 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI 299
              VS+VI EMTDGGADYCFEC+G +S++ +A+   R+GWGKT+ LGV+  GS I L+S 
Sbjct: 261 KNRVSEVINEMTDGGADYCFECVGSSSLVQEAYACCRQGWGKTITLGVDKPGSQICLDSF 320

Query: 300 EIL-KGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEG 358
           ++L  G+ + G+ FGGLK ++ I  L ++YL  EL L +F+THE+ F +IN AF LLLEG
Sbjct: 321 DVLHHGKILMGSLFGGLKAKTHIPILLKRYLSNELELDKFVTHEMKFEEINDAFQLLLEG 380

Query: 359 KSLRCIIWM 367
           K +RC++WM
Sbjct: 381 KCIRCVLWM 389

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P25141|ADH1_PETHY Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1 PE=3 SV=1

 Score =  370 bits (950), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 190/364 (52%), Positives = 244/364 (67%), Gaps = 4/364 (1%)

Query: 6   GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVE 65
           GKPLVIEE+EV PP+  E+R+KIL TSLCH+DV FW++    P  P   IFGHEA G+VE
Sbjct: 21  GKPLVIEEVEVAPPQKMEVRLKILFTSLCHTDVYFWEAKGQTPLFPR--IFGHEAGGIVE 78

Query: 66  SVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFG-RGYRPNMPRDGTSRFREL 124
           SVGE V ++K  D VLP+F  +C +CR CKS +SN C        R  M  DG +RF + 
Sbjct: 79  SVGEGVTDLKPGDHVLPVFTGECQQCRHCKSEESNMCDLLRINTDRGVMIHDGQTRFSK- 137

Query: 125 KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVG 184
            G  I+HF+  S+F+EY+V     V KI P  PL   C+LSCG+STG+GA   VA    G
Sbjct: 138 DGKPIYHFVGTSTFSEYTVCHSGCVTKIDPQAPLDKVCVLSCGISTGLGATLNVAKPTKG 197

Query: 185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVS 244
           STVAIFGLGAVGLA AEGAR+  AS+IIGVD+NP +F   KKFG+T+F+NP   GDK V 
Sbjct: 198 STVAIFGLGAVGLAAAEGARIAGASRIIGVDLNPSRFNDAKKFGVTEFVNPKDHGDKPVQ 257

Query: 245 QVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKG 304
           QVI EMTDGG D   EC G  + M  AF    +GWG  V++GV         + + +L  
Sbjct: 258 QVIAEMTDGGVDRSVECTGNVNAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNE 317

Query: 305 RSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCI 364
           R++ GT+FG  KP+SDI ++  KY+ KEL L +FITH+V F +INKAFD +L+G+S+RC+
Sbjct: 318 RTLKGTFFGNYKPKSDIPSVVDKYMKKELELEKFITHQVPFSEINKAFDYMLKGESIRCM 377

Query: 365 IWMD 368
           I M+
Sbjct: 378 ITME 381

This protein is responsible for the conversion of alcohols to aldehydes in plants and is important for NAD metabolism during anaerobic respiration.

Petunia hybrida (taxid: 4102)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|Q8LEB2|ADHL6_ARATH Alcohol dehydrogenase-like 6 OS=Arabidopsis thaliana GN=At5g24760 PE=2 SV=2

 Score =  365 bits (937), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 187/364 (51%), Positives = 247/364 (67%), Gaps = 7/364 (1%)

Query: 6   GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVE 65
           G+PLV+EE+EV PP+  EIRIK++CTSLC SD++ W+S + LP+     IFGHEA G+VE
Sbjct: 25  GEPLVMEEVEVSPPQPLEIRIKVVCTSLCRSDLSAWESQSLLPR-----IFGHEAAGIVE 79

Query: 66  SVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELK 125
           S+GE V E ++ D VL +F  +CG CR C S KSN C   G   +  M  D  +RF  +K
Sbjct: 80  SIGEGVTEFEKGDHVLAVFTGECGSCRHCISGKSNMCQVLGMERKGLMHSDQKTRF-SIK 138

Query: 126 GDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGS 185
           G  ++H+  +SSF+EY+VV     VK+ P  PL   CLLSCGV+ G+GAAW VA V+ GS
Sbjct: 139 GKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVQKGS 198

Query: 186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQ 245
           +V IFGLG VGL+VA+GA+L  A++I+GVDINP K E  K FG+TDFIN     +  + Q
Sbjct: 199 SVVIFGLGTVGLSVAQGAKLRGAAQILGVDINPAKAEQAKTFGVTDFINSNDLSEP-IPQ 257

Query: 246 VIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGR 305
           VIK MT GGAD+ FEC+G T +   A  S  +GWG TV LGV      +S +    L G+
Sbjct: 258 VIKRMTGGGADFSFECVGDTGIATTALQSCSDGWGMTVTLGVPKAKPEVSAHYGLFLSGK 317

Query: 306 SVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
           S+ GT FGG KP+SD+ +L  KY++KE+ + EFITH +SF +INKAF L+ EGK LRC++
Sbjct: 318 SLKGTLFGGWKPKSDLPSLIDKYMNKEIMIDEFITHNLSFDEINKAFVLMREGKCLRCVL 377

Query: 366 WMDK 369
            M K
Sbjct: 378 HMPK 381

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|A2XAZ3|ADHX_ORYSI Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. indica GN=ADHIII PE=3 SV=1

 Score =  358 bits (919), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 184/364 (50%), Positives = 239/364 (65%), Gaps = 5/364 (1%)

Query: 7   KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVES 66
           KP+ IE+++V PP+A E+R+KIL T+LCH+D   W  S   P+   P I GHEA G+VES
Sbjct: 22  KPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTW--SGKDPEGLFPCILGHEAAGIVES 79

Query: 67  VGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPN-MPRDGTSRFRELK 125
           VGE V EV+  D V+P +  +C EC+ CKS K+N C K         M  D  SRF  + 
Sbjct: 80  VGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRF-SIN 138

Query: 126 GDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGS 185
           G  I+HF+  S+F++Y+VV    V KI P  PL   CLL CGVSTG+GA W  A VE GS
Sbjct: 139 GKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVSTGLGAVWNTAKVEAGS 198

Query: 186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQ 245
            VAIFGLG VGLAVAEGA+   AS+IIG+DI+ +KF++ K FG+T+F+NP    DK + Q
Sbjct: 199 IVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNFGVTEFVNPKD-HDKPIQQ 257

Query: 246 VIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGR 305
           VI ++TDGG DY FECIG  SVM  A     +GWG +VI+GV   G  IS    +++ GR
Sbjct: 258 VIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGR 317

Query: 306 SVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
              GT FGG K RS +  L +KYL+KE+ + E++TH ++  DINKAFDLL EG  LRC++
Sbjct: 318 VWKGTAFGGFKSRSQVPWLVEKYLNKEIKVDEYVTHSMNLTDINKAFDLLHEGGCLRCVL 377

Query: 366 WMDK 369
             DK
Sbjct: 378 ATDK 381

Oryza sativa subsp. indica (taxid: 39946)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 4

>sp|P14674|ADH2_SOLTU Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=ADH2 PE=2 SV=1

 Score =  357 bits (917), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 187/364 (51%), Positives = 242/364 (66%), Gaps = 5/364 (1%)

Query: 6   GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVE 65
           GKPLV+EE++V PP+  E+R+KIL TSLCH+DV FW++    P  P   I GHEA G+VE
Sbjct: 20  GKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQNPVFPR--ILGHEAAGIVE 77

Query: 66  SVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFG-RGYRPNMPRDGTSRFREL 124
           SVGE V E+   D VLP+F  +C +C  CKS +SN CS       R  M  DG SRF  +
Sbjct: 78  SVGEGVTELAPGDHVLPVFTGECKDCAHCKSEESNMCSLLRINTDRGVMINDGQSRF-SI 136

Query: 125 KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVG 184
            G  I+HF+  S+F+EY+VV +  V KI P  PL   C+LSCG+STG+GA   VA    G
Sbjct: 137 NGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGISTGLGATLNVAKPTKG 196

Query: 185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVS 244
           S+VAIFGLGAVGLA AEGAR+  AS+IIGVD+N  +FE  KKFG+T+F+NP     K V 
Sbjct: 197 SSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFGVTEFVNPKDY-SKPVQ 255

Query: 245 QVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKG 304
           +VI EMTDGG D   EC G    M  AF    +GWG  V++GV    +    + +  L  
Sbjct: 256 EVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKEAVFKTHPMNFLNE 315

Query: 305 RSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCI 364
           R++ GT+FG  KPRSDI ++ +KY++KEL L +FITH + F +INKAFDL+L+G+ LRCI
Sbjct: 316 RTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGLRCI 375

Query: 365 IWMD 368
           I M+
Sbjct: 376 ITME 379

Solanum tuberosum (taxid: 4113)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P14675|ADH3_SOLTU Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=ADH3 PE=2 SV=1

 Score =  357 bits (917), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 187/364 (51%), Positives = 242/364 (66%), Gaps = 5/364 (1%)

Query: 6   GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVE 65
           GKPLV+EE++V PP+  E+R+KIL TSLCH+DV FW++    P  P   I GHEA G+VE
Sbjct: 20  GKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQNPVFPR--ILGHEAAGIVE 77

Query: 66  SVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFG-RGYRPNMPRDGTSRFREL 124
           SVGE V E+   D VLP+F  +C +C  CKS +SN CS       R  M  DG SRF  +
Sbjct: 78  SVGEGVTELAPGDHVLPVFTGECKDCAHCKSEESNMCSLLRINTDRGVMINDGQSRF-SI 136

Query: 125 KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVG 184
            G  I+HF+  S+F+EY+VV +  V KI P  PL   C+LSCG+STG+GA   VA    G
Sbjct: 137 NGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGISTGLGATLNVAKPTKG 196

Query: 185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVS 244
           S+VAIFGLGAVGLA AEGAR+  AS+IIGVD+N  +FE  KKFG+T+F+NP     K V 
Sbjct: 197 SSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFGVTEFVNPKDY-SKPVQ 255

Query: 245 QVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKG 304
           +VI EMTDGG D   EC G    M  AF    +GWG  V++GV    +    + +  L  
Sbjct: 256 EVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKEAVFKTHPMNFLNE 315

Query: 305 RSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCI 364
           R++ GT+FG  KPRSDI ++ +KY++KEL L +FITH + F +INKAFDL+L+G+ LRCI
Sbjct: 316 RTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGLRCI 375

Query: 365 IWMD 368
           I M+
Sbjct: 376 ITME 379

Solanum tuberosum (taxid: 4113)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P14673|ADH1_SOLTU Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=ADH1 PE=2 SV=1

 Score =  357 bits (917), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 187/364 (51%), Positives = 243/364 (66%), Gaps = 5/364 (1%)

Query: 6   GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVE 65
           GKPLV+EE++V PP+  E+R+KIL TSLCH+DV FW++    P  P   I GHEA G+VE
Sbjct: 20  GKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQNPVFPR--ILGHEAAGIVE 77

Query: 66  SVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFG-RGYRPNMPRDGTSRFREL 124
           SVGE V E+   D VLP+F  +C +C  CKS +SN CS       R  M  DG SRF  +
Sbjct: 78  SVGEGVTELGPGDHVLPVFTGECKDCAHCKSEESNMCSLLRINTDRGVMINDGQSRF-SI 136

Query: 125 KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVG 184
            G  I+HF+  S+F+EY+VV +  V KI P  PL   C+LSCG+STG+GA   VA    G
Sbjct: 137 NGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGISTGLGATLNVAKPTKG 196

Query: 185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVS 244
           S+VAIFGLGAVGLA AEGAR+  AS+IIGVD+N  +FE  KKFG+T+F+NP     K V 
Sbjct: 197 SSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFGVTEFVNPKDY-SKPVQ 255

Query: 245 QVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKG 304
           +VI EMTDGG D   EC G    M  AF    +GWG  V++GV    +    + + +L  
Sbjct: 256 EVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKEAVFKTHPMNLLNE 315

Query: 305 RSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCI 364
           R++ GT+FG  KPRSDI ++ +KY++KEL L +FITH + F +INKAFDL+L+G+ LRCI
Sbjct: 316 RTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGLRCI 375

Query: 365 IWMD 368
           I M+
Sbjct: 376 ITME 379

Solanum tuberosum (taxid: 4113)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	371
359492460	408	PREDICTED: alcohol dehydrogenase-like 1	0.981	0.892	0.742	1e-158
302141994	387	unnamed protein product [Vitis vinifera]	0.981	0.940	0.742	1e-157
357465103	391	Alcohol dehydrogenase-like protein [Medi	0.978	0.928	0.714	1e-144
115451243	381	Os03g0189400 [Oryza sativa Japonica Grou	0.983	0.958	0.673	1e-140
15219884	386	alcohol dehydrogenase-like 2 [Arabidopsi	0.986	0.948	0.657	1e-138
212720660	382	putative alcohol dehydrogenase superfami	0.983	0.955	0.660	1e-138
195626420	382	alcohol dehydrogenase 1 [Zea mays]	0.983	0.955	0.657	1e-137
297845266	388	hypothetical protein ARALYDRAFT_472484 [	0.986	0.943	0.646	1e-137
357113666	382	PREDICTED: alcohol dehydrogenase-like 7-	0.983	0.955	0.681	1e-135
15219882	388	alcohol dehydrogenase-like 1 [Arabidopsi	0.986	0.943	0.644	1e-135

>gi|359492460|ref|XP_002285748.2| PREDICTED: alcohol dehydrogenase-like 1 [Vitis vinifera]

 Score =  562 bits (1449), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 271/365 (74%), Positives = 310/365 (84%), Gaps = 1/365 (0%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
           PG+ LVIEEIEV PP+AWEIRIKILCTSLCH+DVTFWK + D P+   P I GHEAVGVV
Sbjct: 45  PGEALVIEEIEVAPPEAWEIRIKILCTSLCHTDVTFWKMN-DGPERSFPKILGHEAVGVV 103

Query: 65  ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFREL 124
           ESVGE+VEEVKE DLV+P+F   C ECRDC S+KSN C+KFG  +   MPRDG+SRFR +
Sbjct: 104 ESVGEHVEEVKEGDLVVPVFLPSCKECRDCTSTKSNLCTKFGSKFYQGMPRDGSSRFRNM 163

Query: 125 KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVG 184
           KG+V+HHFL +SSF EY+VVDI HVV++   IP   ACLLSCGVSTG+GAAWKVA VE G
Sbjct: 164 KGEVVHHFLFVSSFVEYTVVDIAHVVRLNHEIPADKACLLSCGVSTGIGAAWKVAEVEEG 223

Query: 185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVS 244
           STVAIFGLGAVGLAVAEGARL  ASKIIGVD+NPEKFEIGKKFG+T FINP  CG+K VS
Sbjct: 224 STVAIFGLGAVGLAVAEGARLRGASKIIGVDLNPEKFEIGKKFGVTHFINPTACGEKAVS 283

Query: 245 QVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKG 304
           QV+KEMTDGGADYCFECIGL S+M DAF+ SREGWGKTVILGVEMHGS +++NS +IL+G
Sbjct: 284 QVVKEMTDGGADYCFECIGLASLMKDAFDCSREGWGKTVILGVEMHGSDLNVNSSQILRG 343

Query: 305 RSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCI 364
           RSV G+ FGGLKP+SDI  LA+KY+DKEL L EFITHEV+F DINKAF+   +GKS+RCI
Sbjct: 344 RSVMGSLFGGLKPKSDIPILAKKYIDKELRLDEFITHEVNFQDINKAFEFQSQGKSIRCI 403

Query: 365 IWMDK 369
           IWMDK
Sbjct: 404 IWMDK 408

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302141994|emb|CBI19197.3| unnamed protein product [Vitis vinifera]

 Score =  561 bits (1447), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 271/365 (74%), Positives = 310/365 (84%), Gaps = 1/365 (0%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
           PG+ LVIEEIEV PP+AWEIRIKILCTSLCH+DVTFWK + D P+   P I GHEAVGVV
Sbjct: 24  PGEALVIEEIEVAPPEAWEIRIKILCTSLCHTDVTFWKMN-DGPERSFPKILGHEAVGVV 82

Query: 65  ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFREL 124
           ESVGE+VEEVKE DLV+P+F   C ECRDC S+KSN C+KFG  +   MPRDG+SRFR +
Sbjct: 83  ESVGEHVEEVKEGDLVVPVFLPSCKECRDCTSTKSNLCTKFGSKFYQGMPRDGSSRFRNM 142

Query: 125 KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVG 184
           KG+V+HHFL +SSF EY+VVDI HVV++   IP   ACLLSCGVSTG+GAAWKVA VE G
Sbjct: 143 KGEVVHHFLFVSSFVEYTVVDIAHVVRLNHEIPADKACLLSCGVSTGIGAAWKVAEVEEG 202

Query: 185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVS 244
           STVAIFGLGAVGLAVAEGARL  ASKIIGVD+NPEKFEIGKKFG+T FINP  CG+K VS
Sbjct: 203 STVAIFGLGAVGLAVAEGARLRGASKIIGVDLNPEKFEIGKKFGVTHFINPTACGEKAVS 262

Query: 245 QVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKG 304
           QV+KEMTDGGADYCFECIGL S+M DAF+ SREGWGKTVILGVEMHGS +++NS +IL+G
Sbjct: 263 QVVKEMTDGGADYCFECIGLASLMKDAFDCSREGWGKTVILGVEMHGSDLNVNSSQILRG 322

Query: 305 RSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCI 364
           RSV G+ FGGLKP+SDI  LA+KY+DKEL L EFITHEV+F DINKAF+   +GKS+RCI
Sbjct: 323 RSVMGSLFGGLKPKSDIPILAKKYIDKELRLDEFITHEVNFQDINKAFEFQSQGKSIRCI 382

Query: 365 IWMDK 369
           IWMDK
Sbjct: 383 IWMDK 387

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357465103|ref|XP_003602833.1| Alcohol dehydrogenase-like protein [Medicago truncatula] gi|355491881|gb|AES73084.1| Alcohol dehydrogenase-like protein [Medicago truncatula]

 Score =  517 bits (1332), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 260/364 (71%), Positives = 311/364 (85%), Gaps = 1/364 (0%)

Query: 6   GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVE 65
           G+PLVIEE+E++PPK+WE+RIKILCTSLCHSDVTFWK ++  P    P I GHEAVG+VE
Sbjct: 27  GEPLVIEEVELDPPKSWEVRIKILCTSLCHSDVTFWKMNSSAPTARFPRILGHEAVGLVE 86

Query: 66  SVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELK 125
           SVGE VEEVKE DLV+P+F  +CGEC DC S+KSN C+KFG     +MPRDGTSRFR++K
Sbjct: 87  SVGENVEEVKEGDLVVPVFLPNCGECIDCGSTKSNNCTKFGNKPIRDMPRDGTSRFRDMK 146

Query: 126 GDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGS 185
           G+V+HH L +SSF+EY+VVD+THVVKIT  IPL  ACLLSCGVSTG+GAAWKVA VE G+
Sbjct: 147 GEVVHHLLGVSSFSEYTVVDVTHVVKITHDIPLDKACLLSCGVSTGIGAAWKVADVEKGT 206

Query: 186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP-ATCGDKTVS 244
           TVAIFGLGAVGLAVA  A+   ASKIIGVD+N +KFEIGK+FGITDF+NP +T  +K+VS
Sbjct: 207 TVAIFGLGAVGLAVAVAAKQRGASKIIGVDLNHDKFEIGKQFGITDFVNPSSTSNEKSVS 266

Query: 245 QVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKG 304
           +VIK+MT+GGADYCFECIGL S+M +AFNSSREGWGKTVI+GVEMHGSP++LN  +ILKG
Sbjct: 267 EVIKDMTNGGADYCFECIGLASLMTEAFNSSREGWGKTVIIGVEMHGSPLTLNPYDILKG 326

Query: 305 RSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCI 364
           +++ G+ FGGLKP+SD+  LAQKYLDKELNL  FI+ EV F DINKAFD LL+GKS+RCI
Sbjct: 327 KTITGSLFGGLKPKSDLPLLAQKYLDKELNLDGFISQEVDFKDINKAFDYLLQGKSIRCI 386

Query: 365 IWMD 368
           I MD
Sbjct: 387 IRMD 390

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115451243|ref|NP_001049222.1| Os03g0189400 [Oryza sativa Japonica Group] gi|108706592|gb|ABF94387.1| oxidoreductase, zinc-binding dehydrogenase family protein, expressed [Oryza sativa Japonica Group] gi|113547693|dbj|BAF11136.1| Os03g0189400 [Oryza sativa Japonica Group] gi|215695369|dbj|BAG90560.1| unnamed protein product [Oryza sativa Japonica Group]

 Score =  503 bits (1294), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 247/367 (67%), Positives = 286/367 (77%), Gaps = 2/367 (0%)

Query: 3   RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVG 62
           R  G+PL +EEI V+PPKA E+RIKI+CTSLCHSDVTFW+   D P +  P IFGHEA G
Sbjct: 17  RAAGEPLAVEEIVVDPPKAHEVRIKIVCTSLCHSDVTFWRMQ-DFPGV-FPRIFGHEAFG 74

Query: 63  VVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFR 122
           VVESVGE+VE     D V+P F   C EC DC S +SN CS +    RP MPRDGT+RFR
Sbjct: 75  VVESVGEHVEGFAAGDPVVPTFLGQCTECVDCASERSNVCSTYRFAVRPGMPRDGTARFR 134

Query: 123 ELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVE 182
           +  G  IHHFL +SSF+EY+VVD   VV++ P +P   A LLSCG +TGVGAAWK+A VE
Sbjct: 135 DRHGAPIHHFLGVSSFSEYTVVDANQVVRVDPAVPPATASLLSCGATTGVGAAWKLAKVE 194

Query: 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT 242
            GS+VAIFGLGAVGLAVAEGAR+  AS IIGVD+NPEK E+GKKFG+T FINP   GDK 
Sbjct: 195 PGSSVAIFGLGAVGLAVAEGARICGASTIIGVDLNPEKHELGKKFGVTHFINPQELGDKP 254

Query: 243 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL 302
           VSQ I EMTDGGADYCFECIGL SVM+DAF SSREGWGKT+ILGVEMHG+P+S+ S+EIL
Sbjct: 255 VSQAIIEMTDGGADYCFECIGLASVMSDAFRSSREGWGKTIILGVEMHGAPLSIPSLEIL 314

Query: 303 KGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLR 362
            G+ V G+ FGG+KP+ DI  LA KYL+KEL L +FITHEV   DIN AFDLLL+GKSLR
Sbjct: 315 NGKCVMGSLFGGVKPKQDIPILADKYLNKELELDKFITHEVPLKDINTAFDLLLQGKSLR 374

Query: 363 CIIWMDK 369
           C IWMDK
Sbjct: 375 CTIWMDK 381

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15219884|ref|NP_173660.1| alcohol dehydrogenase-like 2 [Arabidopsis thaliana] gi|75337342|sp|Q9SK87.1|ADHL2_ARATH RecName: Full=Alcohol dehydrogenase-like 2 gi|6587844|gb|AAF18533.1|AC006551_19 Very similar to alcohol dehydrogenase [Arabidopsis thaliana] gi|50253432|gb|AAT71918.1| At1g22440 [Arabidopsis thaliana] gi|51972064|gb|AAU15136.1| At1g22440 [Arabidopsis thaliana] gi|332192121|gb|AEE30242.1| alcohol dehydrogenase-like 2 [Arabidopsis thaliana]

 Score =  497 bits (1280), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 242/368 (65%), Positives = 295/368 (80%), Gaps = 2/368 (0%)

Query: 3   RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVG 62
           R  G+PLVIEEI+V+PP+A+E+RIKILCTSLCH+DVTFWK  +  P    P I GHEAVG
Sbjct: 20  RKAGEPLVIEEIQVDPPQAYEVRIKILCTSLCHTDVTFWKLDSG-PLARFPRILGHEAVG 78

Query: 63  VVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDG-TSRF 121
           VVES+GE V+  K+ D+VLP+FH  C EC++C S KSN C+K+   Y  N  R G TSRF
Sbjct: 79  VVESIGEKVDGFKQGDVVLPVFHPQCEECKECISPKSNWCTKYTNDYLSNTRRYGMTSRF 138

Query: 122 RELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGV 181
           ++ +G+ IHHF+ +SSFTEY+VVDI H+VKI+P IP+ IA LLSC V+TG+GAAWKVA V
Sbjct: 139 KDSRGEDIHHFIFVSSFTEYTVVDIAHLVKISPEIPVDIAALLSCSVATGLGAAWKVADV 198

Query: 182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 241
           E GSTV IFGLGAVGLAVAEG RL  A+KIIGVD+NP KFEIGK+FGITDF+NPA CG+K
Sbjct: 199 EEGSTVVIFGLGAVGLAVAEGVRLRGAAKIIGVDLNPAKFEIGKRFGITDFVNPALCGEK 258

Query: 242 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI 301
           T+S+VI+EMTD GADY FECIGL S+M +AF S+R G GKT++LG+E    PISL S ++
Sbjct: 259 TISEVIREMTDVGADYSFECIGLASLMEEAFKSTRPGSGKTIVLGMEQKALPISLGSYDL 318

Query: 302 LKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL 361
           L+GR+VCGT FGGLKP+ DI  L  +YL KELNL + ITHE+SF +INKAF LL EG S+
Sbjct: 319 LRGRTVCGTLFGGLKPKLDIPILVDRYLKKELNLEDLITHELSFEEINKAFHLLAEGNSI 378

Query: 362 RCIIWMDK 369
           RCIIWMDK
Sbjct: 379 RCIIWMDK 386

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|212720660|ref|NP_001132441.1| putative alcohol dehydrogenase superfamily protein [Zea mays] gi|194694392|gb|ACF81280.1| unknown [Zea mays] gi|414865247|tpg|DAA43804.1| TPA: putative alcohol dehydrogenase superfamily protein [Zea mays]

 Score =  496 bits (1278), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 243/368 (66%), Positives = 289/368 (78%), Gaps = 3/368 (0%)

Query: 3   RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVG 62
           R  G+PL IEE+ V+ PKA E+RI+I+CTSLCHSDVTFW+   DLP   +P IFGHEA G
Sbjct: 17  RAAGEPLAIEEVVVDTPKAHEVRIRIICTSLCHSDVTFWRMK-DLPD-NIPRIFGHEAFG 74

Query: 63  VVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFR 122
           VVESVGE V+E    D V+P F   C EC DC+S++SN CSK+    RP MPRDGT+RF 
Sbjct: 75  VVESVGEQVDEFAAGDAVVPTFLGQCSECVDCRSARSNMCSKYRFAVRPGMPRDGTTRFT 134

Query: 123 ELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVE 182
           + +G  +HHF  +SSF EY+VVD+  VVK+ P +P  +ACLLSCG STGVGAAWK A VE
Sbjct: 135 DGQGRPLHHFFGVSSFAEYTVVDVNQVVKLNPAVPPALACLLSCGASTGVGAAWKQAKVE 194

Query: 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG-DK 241
            GS+VAIFGLGAVGLAVAEGAR+  ASKIIGVDINPEK E+GKKFG+T FINP   G +K
Sbjct: 195 PGSSVAIFGLGAVGLAVAEGARICGASKIIGVDINPEKCELGKKFGVTHFINPKELGEEK 254

Query: 242 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI 301
            V Q I EMTDGGADYCFECIGL ++MNDAF SSR+GWGKT+ILGVEMHG+P+ ++  EI
Sbjct: 255 PVHQAIAEMTDGGADYCFECIGLAALMNDAFRSSRDGWGKTIILGVEMHGAPLCISPHEI 314

Query: 302 LKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL 361
           L G+SV G+ FGG+KP+ DI  LA KY++KEL L +FITHEV   DIN+AFDLLL+GKSL
Sbjct: 315 LHGKSVIGSMFGGVKPKQDIPILADKYMNKELELDKFITHEVGLKDINQAFDLLLQGKSL 374

Query: 362 RCIIWMDK 369
           RC IWMDK
Sbjct: 375 RCTIWMDK 382

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|195626420|gb|ACG35040.1| alcohol dehydrogenase 1 [Zea mays]

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 242/368 (65%), Positives = 289/368 (78%), Gaps = 3/368 (0%)

Query: 3   RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVG 62
           R  G+PL IEE+ V+ PKA E+RI+I+CTSLCHSDVTFW+   DLP   +P IFGHEA G
Sbjct: 17  RAAGEPLAIEEVVVDTPKAHEVRIRIICTSLCHSDVTFWRMK-DLPD-NIPRIFGHEAFG 74

Query: 63  VVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFR 122
           VVESVGE V+E    D V+P F   C EC DC+S++SN CSK+    RP MPRDGT+RF 
Sbjct: 75  VVESVGEQVDEFAAGDAVVPTFLGQCSECVDCRSARSNMCSKYRFAVRPGMPRDGTTRFT 134

Query: 123 ELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVE 182
           + +G  +HHF  +SSF EY+VVD+  VVK+ P +P  +ACLLSCG STGVGAAWK A VE
Sbjct: 135 DGQGRPLHHFFGVSSFAEYTVVDVNQVVKLNPAVPPALACLLSCGASTGVGAAWKQAKVE 194

Query: 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG-DK 241
            GS+VAIFGLGAVGLAVAEGAR+  ASKIIGVDINP+K E+GKKFG+T FINP   G +K
Sbjct: 195 PGSSVAIFGLGAVGLAVAEGARICGASKIIGVDINPDKCELGKKFGVTHFINPKELGEEK 254

Query: 242 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI 301
            V Q I EMTDGGADYCFECIGL ++MNDAF SSR+GWGKT+ILGVEMHG+P+ ++  EI
Sbjct: 255 PVHQAIAEMTDGGADYCFECIGLAALMNDAFRSSRDGWGKTIILGVEMHGAPLCISPHEI 314

Query: 302 LKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL 361
           L G+SV G+ FGG+KP+ DI  LA KY++KEL L +FITHEV   DIN+AFDLLL+GKSL
Sbjct: 315 LHGKSVIGSMFGGVKPKQDIPILADKYMNKELELDKFITHEVGLKDINQAFDLLLQGKSL 374

Query: 362 RCIIWMDK 369
           RC IWMDK
Sbjct: 375 RCTIWMDK 382

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297845266|ref|XP_002890514.1| hypothetical protein ARALYDRAFT_472484 [Arabidopsis lyrata subsp. lyrata] gi|297336356|gb|EFH66773.1| hypothetical protein ARALYDRAFT_472484 [Arabidopsis lyrata subsp. lyrata]

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 238/368 (64%), Positives = 296/368 (80%), Gaps = 2/368 (0%)

Query: 3   RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVG 62
           R  G+ LVIEEI+V+PP+A+E+RIKILCTSLCH+DVTFWK  +  P    P I GHEAVG
Sbjct: 22  RKAGEALVIEEIQVDPPQAYEVRIKILCTSLCHTDVTFWKLESG-PLARFPRILGHEAVG 80

Query: 63  VVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDG-TSRF 121
           VVES+G  V+  K+ D+VLP+F   C EC++CKS KSN C+++   +  N  R G TSRF
Sbjct: 81  VVESIGANVDGFKQGDVVLPVFQPQCEECKECKSPKSNWCTRYTNDFLSNTRRYGMTSRF 140

Query: 122 RELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGV 181
           ++  G+VIHHF+ +SSFTEY+VVDI H+VKI+P IP+ IA LLSCGV+TG+GAAWKVA V
Sbjct: 141 KDSFGEVIHHFIFVSSFTEYTVVDIAHLVKISPEIPVDIAALLSCGVATGIGAAWKVADV 200

Query: 182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 241
           E GSTVAIFGLGAVGLAVAEG RL  A+KIIGVD+NP KFEIGK++G+TDF+NPA CG+K
Sbjct: 201 EEGSTVAIFGLGAVGLAVAEGVRLRGATKIIGVDLNPAKFEIGKRYGMTDFVNPALCGEK 260

Query: 242 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI 301
           T+S+VI+EMT+ GADY FECIGL S+M +AFNS+R G GKTVILG+E    P+SL S ++
Sbjct: 261 TISEVIREMTEVGADYSFECIGLASLMEEAFNSTRPGSGKTVILGMEQKALPVSLGSYDL 320

Query: 302 LKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL 361
           L+GR++CGT FGGLKP+ DI  L  +YL KELNL   ITHE+SF +INKAFDLL EG S+
Sbjct: 321 LRGRTICGTLFGGLKPKLDIPILVDRYLKKELNLDGLITHELSFEEINKAFDLLAEGNSI 380

Query: 362 RCIIWMDK 369
           RC++WMDK
Sbjct: 381 RCVVWMDK 388

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357113666|ref|XP_003558622.1| PREDICTED: alcohol dehydrogenase-like 7-like [Brachypodium distachyon]

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 250/367 (68%), Positives = 291/367 (79%), Gaps = 2/367 (0%)

Query: 3   RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVG 62
           R  G+PLV+EEI VEPPKA E+RIKI+CTSLCHSDVTFW+   D P +  P IFGHEA G
Sbjct: 18  RAAGEPLVVEEIVVEPPKAHEVRIKIVCTSLCHSDVTFWRMK-DFPGV-FPRIFGHEAFG 75

Query: 63  VVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFR 122
           VVESVGE+VE     D V+P F   CGEC DCKSS+SN CSK+    RP MPRD T+RF 
Sbjct: 76  VVESVGEHVEGFAAGDAVVPTFLAQCGECPDCKSSRSNVCSKYRFMVRPGMPRDETTRFV 135

Query: 123 ELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVE 182
           +  G  ++HFL +SSF+EY+VVD+T VVK+ P +P   ACLLSCG +TGVGAAWK+A VE
Sbjct: 136 DANGSPVYHFLGVSSFSEYTVVDVTQVVKVDPSLPPPTACLLSCGATTGVGAAWKLAKVE 195

Query: 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT 242
            GS+VAIFGLGAVGLAVAEGAR+  ASKIIGVD+NPEK E+GKKFG+T FINP   G+KT
Sbjct: 196 PGSSVAIFGLGAVGLAVAEGARICGASKIIGVDLNPEKQELGKKFGVTHFINPKELGEKT 255

Query: 243 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL 302
           VSQ I EMTDGGADYCFECIGL ++M+DAF SSR GWGKT+ILGVEMHGSP+S+ S EIL
Sbjct: 256 VSQAIIEMTDGGADYCFECIGLAALMSDAFQSSRAGWGKTIILGVEMHGSPLSIPSHEIL 315

Query: 303 KGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLR 362
            G+ V G+ FGG+KP+ DI  LA KYL+KEL L +FITHEV   DIN AFDLL +GKSLR
Sbjct: 316 HGKCVMGSLFGGVKPKDDIPILADKYLNKELELDKFITHEVPLKDINTAFDLLQQGKSLR 375

Query: 363 CIIWMDK 369
           C IWMDK
Sbjct: 376 CTIWMDK 382

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15219882|ref|NP_173659.1| alcohol dehydrogenase-like 1 [Arabidopsis thaliana] gi|79318344|ref|NP_001031079.1| alcohol dehydrogenase-like 1 [Arabidopsis thaliana] gi|75337341|sp|Q9SK86.1|ADHL1_ARATH RecName: Full=Alcohol dehydrogenase-like 1 gi|6587845|gb|AAF18534.1|AC006551_20 Very similar to alcohol dehydrogenase [Arabidopsis thaliana] gi|20260430|gb|AAM13113.1| putative alcohol dehydrogenase [Arabidopsis thaliana] gi|22136286|gb|AAM91221.1| putative alcohol dehydrogenase [Arabidopsis thaliana] gi|332192119|gb|AEE30240.1| alcohol dehydrogenase-like 1 [Arabidopsis thaliana] gi|332192120|gb|AEE30241.1| alcohol dehydrogenase-like 1 [Arabidopsis thaliana]

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 237/368 (64%), Positives = 292/368 (79%), Gaps = 2/368 (0%)

Query: 3   RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVG 62
           R  G+ LVIE+I V+PP+A+E+RIKILCTSLCH+D+TFWK S   P    P I GHEAVG
Sbjct: 22  RKAGEALVIEDIHVDPPQAYEVRIKILCTSLCHTDLTFWKLSFG-PISRFPRILGHEAVG 80

Query: 63  VVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDG-TSRF 121
           VVES+GE V+  K+ D+VLP+FH  C EC+DCKSSK+N C ++   +  N  R G  SRF
Sbjct: 81  VVESIGENVDGFKQGDVVLPVFHPYCEECKDCKSSKTNWCDRYAEDFISNTRRYGMASRF 140

Query: 122 RELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGV 181
           ++  G+VIHHFL +SSF+EY+VVDI H+VKI+P IP+  A LLSCGVSTG+GAAWKVA V
Sbjct: 141 KDSSGEVIHHFLFVSSFSEYTVVDIAHLVKISPEIPVDKAALLSCGVSTGIGAAWKVANV 200

Query: 182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 241
           E GST+AIFGLGAVGLAVAEGARL  A+KIIG+D N +KFE+GKKFG TDFINP  CG+K
Sbjct: 201 EEGSTIAIFGLGAVGLAVAEGARLRGAAKIIGIDTNSDKFELGKKFGFTDFINPTLCGEK 260

Query: 242 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI 301
            +S+VIKEMT+GG DY FEC+GL S++N+AF S+R G GKTV+LG+E H +PISL S ++
Sbjct: 261 KISEVIKEMTEGGVDYSFECVGLASLLNEAFISTRTGTGKTVMLGMEKHAAPISLGSFDL 320

Query: 302 LKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL 361
           L+GR +CG+ FGGLK + DI  L   YL KELNL  FITHE++F +INKAF LL EGKSL
Sbjct: 321 LRGRVICGSLFGGLKSKLDIPILVDHYLKKELNLDSFITHELNFKEINKAFALLEEGKSL 380

Query: 362 RCIIWMDK 369
           RCI+WMDK
Sbjct: 381 RCILWMDK 388

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	371
TAIR|locus:2009512	386	AT1G22440 [Arabidopsis thalian	0.986	0.948	0.565	1.9e-108
TAIR|locus:2009522	388	AT1G22430 [Arabidopsis thalian	0.940	0.899	0.569	4e-106
TAIR|locus:2120663	389	AT4G22110 [Arabidopsis thalian	0.991	0.946	0.545	1.7e-105
TAIR|locus:2157627	390	AT5G42250 [Arabidopsis thalian	0.983	0.935	0.504	3.7e-96
TAIR|locus:2184575	381	AT5G24760 [Arabidopsis thalian	0.962	0.937	0.434	5.1e-74
TAIR|locus:2025237	379	ADH1 "alcohol dehydrogenase 1"	0.964	0.944	0.426	6.7e-72
TAIR|locus:2035619	394	AT1G32780 [Arabidopsis thalian	0.935	0.880	0.410	1.3e-68
TIGR_CMR|SO_A0161	376	SO_A0161 "zinc-containing alco	0.970	0.957	0.392	2.1e-68
ZFIN|ZDB-GENE-011003-1	376	adh5 "alcohol dehydrogenase 5"	0.948	0.936	0.401	4.4e-68
UNIPROTKB|F1PLM5	376	F1PLM5 "Uncharacterized protei	0.948	0.936	0.406	1.3e-66

TAIR|locus:2009512 AT1G22440 [Arabidopsis thaliana (taxid:3702)]

 Score = 1072 (382.4 bits), Expect = 1.9e-108, P = 1.9e-108
 Identities = 208/368 (56%), Positives = 256/368 (69%)

Query:     3 RIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXX 62
             R  G+PL          +A+E+RIKILCTSLCH+DVTFWK  +  P    P I       
Sbjct:    20 RKAGEPLVIEEIQVDPPQAYEVRIKILCTSLCHTDVTFWKLDSG-PLARFPRILGHEAVG 78

Query:    63 XXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDG-TSRF 121
                            D+VLP+FH  C EC++C S KSN C+K+   Y  N  R G TSRF
Sbjct:    79 VVESIGEKVDGFKQGDVVLPVFHPQCEECKECISPKSNWCTKYTNDYLSNTRRYGMTSRF 138

Query:   122 RELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGV 181
             ++ +G+ IHHF+ +SSFTEY+VVDI H+VKI+P IP+ IA LLSC V+TG+GAAWKVA V
Sbjct:   139 KDSRGEDIHHFIFVSSFTEYTVVDIAHLVKISPEIPVDIAALLSCSVATGLGAAWKVADV 198

Query:   182 EVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 241
             E GSTV IF             RL  A+KIIGVD+NP KFEIGK+FGITDF+NPA CG+K
Sbjct:   199 EEGSTVVIFGLGAVGLAVAEGVRLRGAAKIIGVDLNPAKFEIGKRFGITDFVNPALCGEK 258

Query:   242 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI 301
             T+S+VI+EMTD GADY FECIGL S+M +AF S+R G GKT++LG+E    PISL S ++
Sbjct:   259 TISEVIREMTDVGADYSFECIGLASLMEEAFKSTRPGSGKTIVLGMEQKALPISLGSYDL 318

Query:   302 LKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL 361
             L+GR+VCGT FGGLKP+ DI  L  +YL KELNL + ITHE+SF +INKAF LL EG S+
Sbjct:   319 LRGRTVCGTLFGGLKPKLDIPILVDRYLKKELNLEDLITHELSFEEINKAFHLLAEGNSI 378

Query:   362 RCIIWMDK 369
             RCIIWMDK
Sbjct:   379 RCIIWMDK 386

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0010359 "regulation of anion channel activity" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2009522 AT1G22430 [Arabidopsis thaliana (taxid:3702)]

 Score = 1050 (374.7 bits), Expect = 4.0e-106, P = 4.0e-106
 Identities = 200/351 (56%), Positives = 249/351 (70%)

Query:    20 KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXXXXXXXXXXXXRDL 79
             +A+E+RIKILCTSLCH+D+TFWK S   P    P I                      D+
Sbjct:    39 QAYEVRIKILCTSLCHTDLTFWKLSFG-PISRFPRILGHEAVGVVESIGENVDGFKQGDV 97

Query:    80 VLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDG-TSRFRELKGDVIHHFLNISSF 138
             VLP+FH  C EC+DCKSSK+N C ++   +  N  R G  SRF++  G+VIHHFL +SSF
Sbjct:    98 VLPVFHPYCEECKDCKSSKTNWCDRYAEDFISNTRRYGMASRFKDSSGEVIHHFLFVSSF 157

Query:   139 TEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXX 198
             +EY+VVDI H+VKI+P IP+  A LLSCGVSTG+GAAWKVA VE GST+AIF        
Sbjct:   158 SEYTVVDIAHLVKISPEIPVDKAALLSCGVSTGIGAAWKVANVEEGSTIAIFGLGAVGLA 217

Query:   199 XXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYC 258
                  RL  A+KIIG+D N +KFE+GKKFG TDFINP  CG+K +S+VIKEMT+GG DY 
Sbjct:   218 VAEGARLRGAAKIIGIDTNSDKFELGKKFGFTDFINPTLCGEKKISEVIKEMTEGGVDYS 277

Query:   259 FECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPR 318
             FEC+GL S++N+AF S+R G GKTV+LG+E H +PISL S ++L+GR +CG+ FGGLK +
Sbjct:   278 FECVGLASLLNEAFISTRTGTGKTVMLGMEKHAAPISLGSFDLLRGRVICGSLFGGLKSK 337

Query:   319 SDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWMDK 369
              DI  L   YL KELNL  FITHE++F +INKAF LL EGKSLRCI+WMDK
Sbjct:   338 LDIPILVDHYLKKELNLDSFITHELNFKEINKAFALLEEGKSLRCILWMDK 388

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2120663 AT4G22110 [Arabidopsis thaliana (taxid:3702)]

 Score = 1044 (372.6 bits), Expect = 1.7e-105, P = 1.7e-105
 Identities = 202/370 (54%), Positives = 255/370 (68%)

Query:     1 MQRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXX 60
             + R PG+ L          +A+E+RIKI+CTSLCH+DV+F K  +  P    P I     
Sbjct:    21 VSRKPGEALVIEEIHVDPPQAYEVRIKIICTSLCHTDVSFSKIDSG-PLARFPRILGHEA 79

Query:    61 XXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDG-TS 119
                              D+VLP+FH  C ECRDCKSSKSN C++F   +  N  R G TS
Sbjct:    80 VGVIESIGEHVNGFQQGDVVLPVFHPHCEECRDCKSSKSNWCARFADDFLSNTRRYGMTS 139

Query:   120 RFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVA 179
             RF++  G+ I+HFL +SSF+EY+VVDI H+VKI+P IP+  A LLSCGVSTG+GAAWKVA
Sbjct:   140 RFKDSFGEDIYHFLFVSSFSEYTVVDIAHLVKISPDIPVDKAALLSCGVSTGIGAAWKVA 199

Query:   180 GVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG 239
              VE GSTVA+F             RL  A KIIGVD+NPEKFE+GKKFG TDFIN   CG
Sbjct:   200 NVEKGSTVAVFGLGAVGLAVGEGARLRGAGKIIGVDLNPEKFELGKKFGFTDFINSTLCG 259

Query:   240 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI 299
             +  +S+VIKEMT GG DY FEC+GL S++ +AF+S+R G GKTV+LG++ H +P+SL S 
Sbjct:   260 ENKISEVIKEMTGGGVDYSFECVGLPSLLTEAFSSTRTGSGKTVVLGIDKHLTPVSLGSF 319

Query:   300 EILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGK 359
             ++L+GR VCG+ FGGLKP+ DI  L   YL KELNL  FITHE+ F +INKAFDLL++GK
Sbjct:   320 DLLRGRHVCGSLFGGLKPKLDIPILVDHYLKKELNLDSFITHELKFEEINKAFDLLVQGK 379

Query:   360 SLRCIIWMDK 369
             SLRCI+WM+K
Sbjct:   380 SLRCILWMNK 389

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2157627 AT5G42250 [Arabidopsis thaliana (taxid:3702)]

 Score = 956 (341.6 bits), Expect = 3.7e-96, P = 3.7e-96
 Identities = 186/369 (50%), Positives = 241/369 (65%)

Query:     1 MQRIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXX 60
             + R  G+PL          + +E+RI+I+CT+LCHSDVTFWK    +P    P I     
Sbjct:    23 VSRKAGEPLVMEEIMVAPPQPFEVRIRIICTALCHSDVTFWK--LQVPPACFPRILGHEA 80

Query:    61 XXXXXXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR-DGTS 119
                              D VLP F  DCG+C DCKS KSN CSKF     P MPR D +S
Sbjct:    81 IGVVESVGENVKEVVEGDTVLPTFMPDCGDCVDCKSHKSNLCSKFPFKVSPWMPRYDNSS 140

Query:   120 RFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVA 179
             RF +L G+ + HFLN+SSF+EY+V+D+ +VVKI   IP   ACLLSCGVSTGVGAAW+ A
Sbjct:   141 RFTDLNGETLFHFLNVSSFSEYTVLDVANVVKIDSSIPPSRACLLSCGVSTGVGAAWETA 200

Query:   180 GVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG 239
              VE GSTV IF             RL  AS+IIGVDINP KF++G+KFG+T+F+N  TC 
Sbjct:   201 KVEKGSTVVIFGLGSIGLAVAEGARLCGASRIIGVDINPTKFQVGQKFGVTEFVNSMTCE 260

Query:   240 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI 299
                VS+VI EMTDGGADYCFEC+G +S++ +A+   R+GWGKT+ LGV+  GS I L+S 
Sbjct:   261 KNRVSEVINEMTDGGADYCFECVGSSSLVQEAYACCRQGWGKTITLGVDKPGSQICLDSF 320

Query:   300 EILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEG 358
             ++L  G+ + G+ FGGLK ++ I  L ++YL  EL L +F+THE+ F +IN AF LLLEG
Sbjct:   321 DVLHHGKILMGSLFGGLKAKTHIPILLKRYLSNELELDKFVTHEMKFEEINDAFQLLLEG 380

Query:   359 KSLRCIIWM 367
             K +RC++WM
Sbjct:   381 KCIRCVLWM 389

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2184575 AT5G24760 [Arabidopsis thaliana (taxid:3702)]

 Score = 747 (268.0 bits), Expect = 5.1e-74, P = 5.1e-74
 Identities = 158/364 (43%), Positives = 210/364 (57%)

Query:     6 GKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXX 65
             G+PL          +  EIRIK++CTSLC SD++ W+S + LP+     IF         
Sbjct:    25 GEPLVMEEVEVSPPQPLEIRIKVVCTSLCRSDLSAWESQSLLPR-----IFGHEAAGIVE 79

Query:    66 XXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELK 125
                         D VL +F  +CG CR C S KSN C   G   +  M  D  +RF  +K
Sbjct:    80 SIGEGVTEFEKGDHVLAVFTGECGSCRHCISGKSNMCQVLGMERKGLMHSDQKTRF-SIK 138

Query:   126 GDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGS 185
             G  ++H+  +SSF+EY+VV     VK+ P  PL   CLLSCGV+ G+GAAW VA V+ GS
Sbjct:   139 GKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVQKGS 198

Query:   186 TVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQ 245
             +V IF             +L  A++I+GVDINP K E  K FG+TDFIN     +  + Q
Sbjct:   199 SVVIFGLGTVGLSVAQGAKLRGAAQILGVDINPAKAEQAKTFGVTDFINSNDLSEP-IPQ 257

Query:   246 VIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGR 305
             VIK MT GGAD+ FEC+G T +   A  S  +GWG TV LGV      +S +    L G+
Sbjct:   258 VIKRMTGGGADFSFECVGDTGIATTALQSCSDGWGMTVTLGVPKAKPEVSAHYGLFLSGK 317

Query:   306 SVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
             S+ GT FGG KP+SD+ +L  KY++KE+ + EFITH +SF +INKAF L+ EGK LRC++
Sbjct:   318 SLKGTLFGGWKPKSDLPSLIDKYMNKEIMIDEFITHNLSFDEINKAFVLMREGKCLRCVL 377

Query:   366 WMDK 369
              M K
Sbjct:   378 HMPK 381

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009611 "response to wounding" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

TAIR|locus:2025237 ADH1 "alcohol dehydrogenase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
 Identities = 155/363 (42%), Positives = 203/363 (55%)

Query:     6 GKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXX 65
             GKPL          +  E+RIKIL TSLCH+DV FW++    P  P   IF         
Sbjct:    19 GKPLVIEEVEVAPPQKHEVRIKILFTSLCHTDVYFWEAKGQTPLFPR--IFGHEAGGIVE 76

Query:    66 XXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFG-RGYRPNMPRDGTSRFREL 124
                         D VLPIF  +CGECR C S +SN C        R  M  DG SRF  +
Sbjct:    77 SVGEGVTDLQPGDHVLPIFTGECGECRHCHSEESNMCDLLRINTERGGMIHDGESRF-SI 135

Query:   125 KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVG 184
              G  I+HFL  S+F+EY+VV    V KI P  PL   C++SCG+STG+GA   VA  + G
Sbjct:   136 NGKPIYHFLGTSTFSEYTVVHSGQVAKINPDAPLDKVCIVSCGLSTGLGATLNVAKPKKG 195

Query:   185 STVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVS 244
              +VAIF             R+  AS+IIGVD N ++F+  K+FG+T+ +NP    DK + 
Sbjct:   196 QSVAIFGLGAVGLGAAEGARIAGASRIIGVDFNSKRFDQAKEFGVTECVNPKD-HDKPIQ 254

Query:   245 QVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKG 304
             QVI EMTDGG D   EC G    M  AF    +GWG  V++GV         + +  L  
Sbjct:   255 QVIAEMTDGGVDRSVECTGSVQAMIQAFECVHDGWGVAVLVGVPSKDDAFKTHPMNFLNE 314

Query:   305 RSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCI 364
             R++ GT+FG  KP++DI  + +KY++KEL L +FITH V F +INKAFD +L+G+S+RCI
Sbjct:   315 RTLKGTFFGNYKPKTDIPGVVEKYMNKELELEKFITHTVPFSEINKAFDYMLKGESIRCI 374

Query:   365 IWM 367
             I M
Sbjct:   375 ITM 377

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0045333 "cellular respiration" evidence=TAS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006970 "response to osmotic stress" evidence=IGI

GO:0001666 "response to hypoxia" evidence=IEP;RCA

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0009651 "response to salt stress" evidence=IEP

GO:0005829 "cytosol" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS;IMP

TAIR|locus:2035619 AT1G32780 [Arabidopsis thaliana (taxid:3702)]

 Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
 Identities = 147/358 (41%), Positives = 203/358 (56%)

Query:    23 EIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLP 82
             E+R+KIL +S+CH+D+  W  + +  +   P I                      D V+P
Sbjct:    37 EVRVKILYSSICHTDLGCWNGTNEAERA-FPRILGHEAVGIVESVGEGVKDVKEGDYVIP 95

Query:    83 IFHRDCGECRDCKSSKSNTCSKFGRG-YRPNMPRDGTSRFREL--------KGDVIHHFL 133
              F+ +CGEC+ CK  +SN C ++     +  M  DG +RF           +   I+HFL
Sbjct:    96 TFNGECGECKVCKREESNLCERYHVDPMKRVMVNDGGTRFSTTINKDGGSSQSQPIYHFL 155

Query:   134 NISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXX 193
             N S+FTEY+V+D   VVKI P+ PL    LLSCGVSTGVGAAW +A V+ G + A+F   
Sbjct:   156 NTSTFTEYTVLDSACVVKIDPNSPLKQMSLLSCGVSTGVGAAWNIANVKEGKSTAVFGLG 215

Query:   194 XXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG 253
                       R   AS+IIGVD N  KFE GK  G+TDFINP     K V Q+I+E+T G
Sbjct:   216 SVGLAVAEGARARGASRIIGVDANASKFEKGKLMGVTDFINPKDL-TKPVHQMIREITGG 274

Query:   254 GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFG 313
             G DY FEC G   V+ +AF S+  GWG TV++G+      + L+ +E+  GR + G+ FG
Sbjct:   275 GVDYSFECTGNVDVLREAFLSTHVGWGSTVLVGIYPTPRTLPLHPMELFDGRRITGSVFG 334

Query:   314 GLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWMDKLI 371
             G KP+S +   AQ+ +   + L  FIT+E+ F  IN AF LL +GKSLRCI+ + KL+
Sbjct:   335 GFKPKSQLPNFAQQCMKGVVKLEPFITNELPFEKINDAFQLLRDGKSLRCILQISKLL 392

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TIGR_CMR|SO_A0161 SO_A0161 "zinc-containing alcohol dehydrogenase" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 694 (249.4 bits), Expect = 2.1e-68, P = 2.1e-68
 Identities = 143/364 (39%), Positives = 202/364 (55%)

Query:     6 GKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXX 65
             G+PL          +  E+R+K++ T +CH+D  F  S  D P+   P I          
Sbjct:    17 GEPLSIEIVDVMPPQKGEVRVKMIATGVCHTDA-FTLSGDD-PEGIFPCILGHEGGGIVE 74

Query:    66 XXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELK 125
                         D V+P++  +CGEC+ CKS K+N C K        +  DGTSRF +  
Sbjct:    75 SIGEGVTSVQVGDHVIPLYTPECGECKFCKSGKTNLCQKIRETQGKGLMPDGTSRFSK-D 133

Query:   126 GDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGS 185
             G +I+H++  S+F+EY+V+    + K+ P  PL   CLL CGV+TG+GA    A VE G+
Sbjct:   134 GQIIYHYMGTSTFSEYTVLPEISLAKVNPDAPLEEVCLLGCGVTTGMGAVMNTAKVEEGA 193

Query:   186 TVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQ 245
             TVAIF              + +AS+II +DIN  KFE+  K G TDFINP    DK +  
Sbjct:   194 TVAIFGMGGIGLSAVIGATMAKASRIIVIDINESKFELAGKLGATDFINPKDY-DKPIQD 252

Query:   246 VIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGR 305
             VI E+TDGG DY FECIG  +VM  A     +GWG++V++GV   G  IS    +++ GR
Sbjct:   253 VIVELTDGGVDYSFECIGNVNVMRSALECCHKGWGESVVIGVAGAGQEISTRPFQLVTGR 312

Query:   306 SVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
                G+ FGG+K RS++    ++YL  E  L +FITH +S   +N AFDL+ +GKS+R +I
Sbjct:   313 VWKGSAFGGVKGRSELPEYVERYLAGEFKLSDFITHTMSLEQVNDAFDLMHQGKSIRTVI 372

Query:   366 WMDK 369
               DK
Sbjct:   373 HFDK 376

GO:0004024 "alcohol dehydrogenase activity, zinc-dependent" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

GO:0008270 "zinc ion binding" evidence=ISS

ZFIN|ZDB-GENE-011003-1 adh5 "alcohol dehydrogenase 5" [Danio rerio (taxid:7955)]

 Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
 Identities = 146/364 (40%), Positives = 202/364 (55%)

Query:     6 GKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXX 65
             GKPL          KA E+R+KI  T +CH+D  +  S +D P+   PVI          
Sbjct:    19 GKPLTIEEVEVAPPKAHEVRVKIHATGVCHTDA-YTLSGSD-PEGLFPVILGHEGAGTVE 76

Query:    66 XXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKF----GRGYRPNMPRDGTSRF 121
                         D V+P++   CGEC+ CK+ K+N C K     G+G  P    D TSRF
Sbjct:    77 SVGEGVTKFKPGDTVIPLYVPQCGECKFCKNPKTNLCQKIRVTQGQGLMP----DNTSRF 132

Query:   122 RELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGV 181
                KG  + HF+  S+F+EY+VV    + K+  H PL   CLL CG+STG GAA   A V
Sbjct:   133 T-CKGKQLFHFMGTSTFSEYTVVAEISLAKVDEHAPLDKVCLLGCGISTGYGAAINTAKV 191

Query:   182 EVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 241
             E GST A+F             +   A++IIG+D+NP+KFEI KKFG T+F+NP     K
Sbjct:   192 EAGSTCAVFGLGAVGLAVVMGCKSAGATRIIGIDVNPDKFEIAKKFGATEFVNPKD-HSK 250

Query:   242 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI 301
              + +V+ E+TDGG DY FECIG   +M  A  +  +GWG +VI+GV   G  IS    ++
Sbjct:   251 PIQEVLVELTDGGVDYSFECIGNVGIMRAALEACHKGWGTSVIIGVAGAGQEISTRPFQL 310

Query:   302 LKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL 361
             + GR+  GT FGG K    +  L   Y++K+L + EF+TH + F  IN+AFDL+  GKS+
Sbjct:   311 VTGRTWKGTAFGGWKSVESVPKLVNDYMNKKLMVDEFVTHTLPFAQINEAFDLMHAGKSI 370

Query:   362 RCII 365
             R ++
Sbjct:   371 RAVL 374

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1PLM5 F1PLM5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
 Identities = 148/364 (40%), Positives = 200/364 (54%)

Query:     6 GKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXX 65
             GKPL          KA E+RIKI+ T++CH+D  +  S  D P+   PVI          
Sbjct:    19 GKPLSIEEVEVAPPKAHEVRIKIIATAVCHTDA-YTLSGAD-PEGSFPVILGHEGAGIVE 76

Query:    66 XXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKF----GRGYRPNMPRDGTSRF 121
                         D V+P++   CGEC+ C + K+N C K     G+G  P    DGTSRF
Sbjct:    77 SVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMP----DGTSRF 132

Query:   122 RELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGV 181
                KG  I H++  S+F+EY+VV    V KI P  PL   CLL CG+STG GAA   A V
Sbjct:   133 T-CKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAALNTAKV 191

Query:   182 EVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 241
             E GST A+F             ++  AS+IIGVDIN +KF   K+FG ++ INP     K
Sbjct:   192 EPGSTCAVFGLGGVGLATIMGCKVAGASRIIGVDINKDKFSRAKEFGASECINPQDFS-K 250

Query:   242 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI 301
              + +V+ EMTDGG DY FECIG   VM  A  +  +GWG +VI+GV   G  I+    ++
Sbjct:   251 PIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVIVGVAASGEEIATRPFQL 310

Query:   302 LKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL 361
             + GR   GT FGG K    +  L  +Y+ +++ + EF+TH +SF  IN+AFDLL  GKS+
Sbjct:   311 VTGRVWKGTAFGGWKSVESVPKLVSEYMSRKIKVDEFVTHSLSFDQINEAFDLLHAGKSI 370

Query:   362 RCII 365
             R ++
Sbjct:   371 RTVV 374

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P19854	ADHX_HORSE	1, ., 1, ., 1, ., 2, 8, 4	0.4807	0.9487	0.9411	yes	no
P14674	ADH2_SOLTU	1, ., 1, ., 1, ., 1	0.5137	0.9676	0.9447	N/A	no
P14675	ADH3_SOLTU	1, ., 1, ., 1, ., 1	0.5137	0.9676	0.9447	N/A	no
A2XAZ3	ADHX_ORYSI	1, ., 1, ., 1, ., 2, 8, 4	0.5054	0.9676	0.9422	N/A	no
P14673	ADH1_SOLTU	1, ., 1, ., 1, ., 1	0.5137	0.9676	0.9447	N/A	no
P12711	ADHX_RAT	1, ., 1, ., 1, ., 2, 8, 4	0.4808	0.9541	0.9465	yes	no
P11766	ADHX_HUMAN	1, ., 1, ., 1, ., 2, 8, 4	0.4807	0.9487	0.9411	yes	no
P28032	ADH2_SOLLC	1, ., 1, ., 1, ., 1	0.5123	0.9649	0.9421	N/A	no
P80572	ADHX_PEA	1, ., 1, ., 1, ., 2, 8, 4	0.5041	0.9541	0.9365	N/A	no
P48977	ADH_MALDO	1, ., 1, ., 1, ., 1	0.5095	0.9703	0.9473	N/A	no
Q9SK87	ADHL2_ARATH	1, ., 1, ., 1, ., 1	0.6576	0.9865	0.9481	yes	no
P04707	ADH2_MAIZE	1, ., 1, ., 1, ., 1	0.5027	0.9568	0.9366	N/A	no
P46415	ADHX_DROME	1, ., 1, ., 1, ., 2, 8, 4	0.4777	0.9595	0.9393	yes	no
Q3ZC42	ADHX_BOVIN	1, ., 1, ., 1, ., 2, 8, 4	0.4752	0.9487	0.9411	yes	no
P25141	ADH1_PETHY	1, ., 1, ., 1, ., 1	0.5219	0.9703	0.9424	N/A	no
P32771	FADH_YEAST	1, ., 1, ., 1, ., -	0.4513	0.9649	0.9274	yes	no
P12886	ADH1_PEA	1, ., 1, ., 1, ., 1	0.5068	0.9703	0.9473	N/A	no
P28474	ADHX_MOUSE	1, ., 1, ., 1, ., 2, 8, 4	0.4781	0.9541	0.9465	yes	no
Q54TC2	ADHX_DICDI	1, ., 1, ., 1, ., 2, 8, 4	0.4684	0.9487	0.9287	yes	no
P13603	ADH1_TRIRP	1, ., 1, ., 1, ., 1	0.5041	0.9703	0.9473	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.976
4th Layer	1.1.1.1	0.991

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00015186001	SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (387 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00036847001	SubName- Full=Chromosome chr4 scaffold_83, whole genome shotgun sequence; (485 aa)						•			0.899
	GSVIVG00035907001	SubName- Full=Chromosome chr10 scaffold_81, whole genome shotgun sequence; (215 aa)						•			0.899
	GSVIVG00034061001	SubName- Full=Chromosome chr9 scaffold_7, whole genome shotgun sequence; (450 aa)						•			0.899
	GSVIVG00028844001	SubName- Full=Chromosome chr1 scaffold_46, whole genome shotgun sequence; (538 aa)						•			0.899
	GSVIVG00024617001	SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (485 aa)						•			0.899
	GSVIVG00024065001	SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (607 aa)						•			0.899
	GSVIVG00020768001	SubName- Full=Chromosome chr14 scaffold_21, whole genome shotgun sequence; (531 aa)						•			0.899
	GSVIVG00019283001	SubName- Full=Chromosome chr7 scaffold_20, whole genome shotgun sequence; (549 aa)						•			0.899
	GSVIVG00016425001	SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (362 aa)						•			0.899
	GSVIVG00016121001	SubName- Full=Chromosome chr17 scaffold_12, whole genome shotgun sequence; (511 aa)						•			0.899

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	371
cd08301	369	cd08301, alcohol_DH_plants, Plant alcohol dehydrog	0.0
PLN02740	381	PLN02740, PLN02740, Alcohol dehydrogenase-like	1e-159
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	1e-159
cd08300	368	cd08300, alcohol_DH_class_III, class III alcohol d	1e-153
PLN02827	378	PLN02827, PLN02827, Alcohol dehydrogenase-like	1e-142
cd08299	373	cd08299, alcohol_DH_class_I_II_IV, class I, II, IV	1e-135
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	1e-130
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	1e-127
TIGR02818	368	TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat	1e-121
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	1e-116
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	2e-85
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	1e-81
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	2e-77
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	1e-61
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	3e-57
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	1e-51
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	5e-51
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	5e-49
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	7e-49
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	3e-48
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	3e-46
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	2e-45
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	3e-45
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	9e-44
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	7e-43
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	2e-42
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	2e-41
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	6e-40
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	2e-39
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	2e-39
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	1e-37
cd05281	341	cd05281, TDH, Threonine dehydrogenase	2e-37
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	1e-36
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	1e-35
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	1e-34
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	2e-32
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	4e-32
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	1e-31
cd08286	345	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase	5e-31
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	4e-30
cd08283	386	cd08283, FDH_like_1, Glutathione-dependent formald	4e-29
cd08287	345	cd08287, FDH_like_ADH3, formaldehyde dehydrogenase	2e-26
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	3e-26
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	1e-25
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	2e-24
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	3e-23
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	3e-23
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	1e-22
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	2e-22
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	4e-22
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	4e-22
cd08296	333	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases	1e-21
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	4e-21
PRK09422	338	PRK09422, PRK09422, ethanol-active dehydrogenase/a	1e-19
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	2e-19
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	3e-19
cd08256	350	cd08256, Zn_ADH2, Alcohol dehydrogenases of the MD	4e-19
TIGR03201	349	TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1	2e-18
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	8e-18
cd08262	341	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD	1e-17
PRK10083	339	PRK10083, PRK10083, putative oxidoreductase; Provi	2e-14
TIGR03366	280	TIGR03366, HpnZ_proposed, putative phosphonate cat	2e-14
TIGR02819	393	TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenas	4e-14
PLN02702	364	PLN02702, PLN02702, L-idonate 5-dehydrogenase	7e-14
cd08230	355	cd08230, glucose_DH, Glucose dehydrogenase	1e-13
PRK10309	347	PRK10309, PRK10309, galactitol-1-phosphate dehydro	1e-13
cd08282	375	cd08282, PFDH_like, Pseudomonas putida aldehyde-di	5e-13
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	2e-12
PLN02178	375	PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase	1e-11
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	1e-11
cd08282	375	cd08282, PFDH_like, Pseudomonas putida aldehyde-di	5e-11
PRK09880	343	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro	1e-10
PLN02586	360	PLN02586, PLN02586, probable cinnamyl alcohol dehy	3e-10
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	2e-09
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	2e-09
cd08242	319	cd08242, MDR_like, Medium chain dehydrogenases/red	1e-08
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	2e-08
PLN02514	357	PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase	6e-08
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	8e-08
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	3e-07
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	8e-07
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	1e-06
cd08292	324	cd08292, ETR_like_2, 2-enoyl thioester reductase (	1e-06
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	2e-06
cd08247	352	cd08247, AST1_like, AST1 is a cytoplasmic protein	2e-06
cd08238	410	cd08238, sorbose_phosphate_red, L-sorbose-1-phosph	7e-06
TIGR02822	329	TIGR02822, adh_fam_2, zinc-binding alcohol dehydro	2e-05
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	2e-05
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	4e-05
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	4e-05
cd01075	200	cd01075, NAD_bind_Leu_Phe_Val_DH, NAD(P) binding d	5e-04
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	7e-04
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	0.002
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	0.003

>gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase

 Score =  568 bits (1466), Expect = 0.0
 Identities = 206/363 (56%), Positives = 252/363 (69%), Gaps = 5/363 (1%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
            GKPLVIEE+EV PP+A E+RIKIL TSLCH+DV FW++    P  P   I GHEA G+V
Sbjct: 11  AGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPR--ILGHEAAGIV 68

Query: 65  ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPN-MPRDGTSRFRE 123
           ESVGE V ++K  D VLP+F  +C ECR CKS KSN C           M  DG SRF  
Sbjct: 69  ESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFS- 127

Query: 124 LKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEV 183
           + G  I+HF+  S+F+EY+VV +  V KI P  PL   CLLSCGVSTG+GAAW VA V+ 
Sbjct: 128 INGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAAWNVAKVKK 187

Query: 184 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTV 243
           GSTVAIFGLGAVGLAVAEGAR+  AS+IIGVD+NP KFE  KKFG+T+F+NP    DK V
Sbjct: 188 GSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPKDH-DKPV 246

Query: 244 SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK 303
            +VI EMT GG DY FEC G    M  AF    +GWG TV+LGV    +  S + + +L 
Sbjct: 247 QEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLN 306

Query: 304 GRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRC 363
           GR++ GT FGG KP++D+  L +KY+ KEL L +FITHE+ F +INKAFDLLL+G+ LRC
Sbjct: 307 GRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECLRC 366

Query: 364 IIW 366
           I+ 
Sbjct: 367 ILH 369

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369

>gnl|CDD|178341 PLN02740, PLN02740, Alcohol dehydrogenase-like

 Score =  451 bits (1162), Expect = e-159
 Identities = 199/365 (54%), Positives = 257/365 (70%), Gaps = 8/365 (2%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
           PG+PLV+EEI V+PP+  E+RIKIL TS+CH+D++ WK   +  +   P I GHEA G+V
Sbjct: 19  PGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQR-AYPRILGHEAAGIV 77

Query: 65  ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFG-RGYRPNMPRDGTSRFRE 123
           ESVGE VE++K  D V+PIF+ +CG+CR CK  K+N C  +    ++  M  DG +RF  
Sbjct: 78  ESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFST 137

Query: 124 LK-GDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVE 182
              G  I+HFLN S+FTEY+V+D   VVKI P+ PL    LLSCGVSTGVGAAW  A V+
Sbjct: 138 KGDGQPIYHFLNTSTFTEYTVLDSACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQ 197

Query: 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT 242
            GS+VAIFGLGAVGLAVAEGAR   ASKIIGVDINPEKFE GK+ GITDFINP    DK 
Sbjct: 198 AGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDFINPKDS-DKP 256

Query: 243 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP--ISLNSIE 300
           V + I+EMT GG DY FEC G   V+ +AF S+ +GWG TV+LG+  H +P  + L+ +E
Sbjct: 257 VHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGI--HPTPKMLPLHPME 314

Query: 301 ILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS 360
           +  GRS+ G+ FG  K +S +  LA++ +   +NL  FITHE+ F  IN+AF LL +GK+
Sbjct: 315 LFDGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA 374

Query: 361 LRCII 365
           LRC++
Sbjct: 375 LRCLL 379

Length = 381

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score =  449 bits (1158), Expect = e-159
 Identities = 189/361 (52%), Positives = 245/361 (67%), Gaps = 7/361 (1%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
            GKPLVIEEIEV PPKA E+RIK+L TS+CH+D+   +          PVI GHE  G+V
Sbjct: 11  AGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGF---KATLFPVILGHEGAGIV 67

Query: 65  ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFREL 124
           ESVGE V  +K  D V+P+F   CGEC +C+S K+N C K+       MP DGTSRF   
Sbjct: 68  ESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMP-DGTSRF-TC 125

Query: 125 KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVG 184
           KG  I+HFL  S+F++Y+VVD  +V KI P  PL   CLL CG STG GAAW  A VE G
Sbjct: 126 KGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNTAKVEPG 185

Query: 185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVS 244
           STVA+FGLGAVGL+   GA++  AS+IIGVDIN +KFE  K+FG TDFINP    DK VS
Sbjct: 186 STVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKDS-DKPVS 244

Query: 245 QVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKG 304
           +VI+EMT GG DY FEC G   +MN+A  S++ GWG +V++GV   G+ +S+   +++ G
Sbjct: 245 EVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVP-PGAELSIRPFQLILG 303

Query: 305 RSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCI 364
           R+  G++FGG K RSD+  L  KY++K+ +L E ITH + F +INK FDL+  G+ +R +
Sbjct: 304 RTWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGECIRTV 363

Query: 365 I 365
           I
Sbjct: 364 I 364

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases

 Score =  435 bits (1122), Expect = e-153
 Identities = 190/365 (52%), Positives = 239/365 (65%), Gaps = 12/365 (3%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
            GKPL IEE+EV PPKA E+RIKIL T +CH+D     S  D P+   PVI GHE  G+V
Sbjct: 11  AGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTL-SGAD-PEGLFPVILGHEGAGIV 68

Query: 65  ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKF----GRGYRPNMPRDGTSR 120
           ESVGE V  VK  D V+P++  +CGEC+ CKS K+N C K     G+G    MP DGTSR
Sbjct: 69  ESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGL---MP-DGTSR 124

Query: 121 FRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAG 180
           F   KG  I+HF+  S+F+EY+VV    V KI P  PL   CLL CGV+TG GA    A 
Sbjct: 125 FS-CKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAPLDKVCLLGCGVTTGYGAVLNTAK 183

Query: 181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 240
           VE GSTVA+FGLGAVGLAV +GA+   AS+IIG+DINP+KFE+ KKFG TD +NP    D
Sbjct: 184 VEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKDH-D 242

Query: 241 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE 300
           K + QV+ EMTDGG DY FECIG   VM  A  +  +GWG +VI+GV   G  IS    +
Sbjct: 243 KPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQ 302

Query: 301 ILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS 360
           ++ GR   GT FGG K RS +  L + Y+  ++ + EFITH +   +IN+AFDL+  GKS
Sbjct: 303 LVTGRVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS 362

Query: 361 LRCII 365
           +R ++
Sbjct: 363 IRTVV 367

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368

>gnl|CDD|215442 PLN02827, PLN02827, Alcohol dehydrogenase-like

 Score =  409 bits (1052), Expect = e-142
 Identities = 189/365 (51%), Positives = 245/365 (67%), Gaps = 7/365 (1%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
            G+ LV+EE+EV PP+  EIRIK++ TSLC SD++ W+S    P+     IFGHEA G+V
Sbjct: 21  AGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQALFPR-----IFGHEASGIV 75

Query: 65  ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFREL 124
           ES+GE V E ++ D VL +F  +CG CR C S KSN C   G   +  M  D  +RF  +
Sbjct: 76  ESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRF-SI 134

Query: 125 KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVG 184
           KG  ++H+  +SSF+EY+VV     VK+ P  PL   CLLSCGV+ G+GAAW VA V  G
Sbjct: 135 KGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKG 194

Query: 185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVS 244
           S+V IFGLG VGL+VA+GA+L  AS+IIGVDINPEK E  K FG+TDFINP     + + 
Sbjct: 195 SSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINPNDL-SEPIQ 253

Query: 245 QVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKG 304
           QVIK MT GGADY FEC+G T +   A  S  +GWG TV LGV      +S +    L G
Sbjct: 254 QVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSG 313

Query: 305 RSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCI 364
           R++ G+ FGG KP+SD+ +L  KY++KE+ + EFITH +SF +INKAF+L+ EGK LRC+
Sbjct: 314 RTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKCLRCV 373

Query: 365 IWMDK 369
           I M K
Sbjct: 374 IHMPK 378

Length = 378

>gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases

 Score =  390 bits (1005), Expect = e-135
 Identities = 171/361 (47%), Positives = 214/361 (59%), Gaps = 5/361 (1%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
           P KP  IEEIEV PPKA E+RIKI+ T +C SD             P PVI GHEA G+V
Sbjct: 16  PKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKL---VTPFPVILGHEAAGIV 72

Query: 65  ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFREL 124
           ESVGE V  VK  D V+P+F   CG+CR C + +SN C K   G    + +DGTSRF   
Sbjct: 73  ESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRF-TC 131

Query: 125 KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVG 184
           KG  IHHFL  S+F+EY+VVD   V KI    PL   CL+ CG STG GAA   A V  G
Sbjct: 132 KGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPG 191

Query: 185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVS 244
           ST A+FGLG VGL+   G +   AS+II VDIN +KF   K+ G T+ INP     K + 
Sbjct: 192 STCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQDY-KKPIQ 250

Query: 245 QVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKG 304
           +V+ EMTDGG D+ FE IG    M  A  S  EG+G +VI+GV      +S+N + +L G
Sbjct: 251 EVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPMLLLTG 310

Query: 305 RSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCI 364
           R+  G  FGG K +  +  L   Y+ K+ NL   ITH + F  IN+ FDLL  GKS+R +
Sbjct: 311 RTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKSIRTV 370

Query: 365 I 365
           +
Sbjct: 371 L 371

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score =  376 bits (969), Expect = e-130
 Identities = 168/365 (46%), Positives = 223/365 (61%), Gaps = 15/365 (4%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
            GKPL IEE++++PP+A E+ ++I  T +CH+D      S D P+   P + GHE  G+V
Sbjct: 11  AGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHT--LSGDDPE-GFPAVLGHEGAGIV 67

Query: 65  ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKF----GRGYRPNMPRDGTSR 120
           E+VGE V  VK  D V+ +F  +CG+C+ C S K N C       G+G  P    DGT+R
Sbjct: 68  EAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMP----DGTTR 123

Query: 121 FRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAG 180
                G  ++H+L  S+F EY+VV    +VKI P  PL  ACLL CGV+TG+GA    A 
Sbjct: 124 L-SGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAK 182

Query: 181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 240
           VE G TVA+FGLG VGLA  +GA+   A +II VDINPEK E+ KKFG T F+NP    D
Sbjct: 183 VEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPKEVDD 242

Query: 241 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE 300
             V + I E+TDGGADY FEC+G   VM  A  ++    G +VI+GV   G  IS    +
Sbjct: 243 --VVEAIVELTDGGADYAFECVGNVEVMRQALEATHR-GGTSVIIGVAGAGQEISTRPFQ 299

Query: 301 ILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS 360
           ++ GR   G+ FGG +PRSDI  L   Y+  +L L   +TH +   DIN+AFDL+ EGKS
Sbjct: 300 LVTGRVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKS 359

Query: 361 LRCII 365
           +R +I
Sbjct: 360 IRSVI 364

Length = 366

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score =  370 bits (951), Expect = e-127
 Identities = 171/361 (47%), Positives = 223/361 (61%), Gaps = 7/361 (1%)

Query: 6   GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVE 65
           GKPL IEEIEV PPKA E+RIK++ T +CH+D+        LP  PLPVI GHE  G+VE
Sbjct: 10  GKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHV--IDGKLPT-PLPVILGHEGAGIVE 66

Query: 66  SVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKF-GRGYRPNMPRDGTSRFREL 124
           S+G  V  +K  D V+P+F   CG+C+ C + + N CSK  G   R  M  DGTSRF   
Sbjct: 67  SIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMS-DGTSRF-TC 124

Query: 125 KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVG 184
           KG  IHHFL  S+F EY+VV    + KI P  PL   CL+ CG STG GAA   A V  G
Sbjct: 125 KGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKVTPG 184

Query: 185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVS 244
           ST A+FGLG VGL+V  G +   AS+II VDIN +KFE  K+ G T+ INP    DK + 
Sbjct: 185 STCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRD-QDKPIV 243

Query: 245 QVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKG 304
           +V+ EMTDGG DY FE IG    +  A +++R G G +V++GV   G+  +L+  ++L G
Sbjct: 244 EVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDLLTG 303

Query: 305 RSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCI 364
           R++ GT FGG K +  +  L   Y  K+  L E ITH + F +IN  FDL+  G+S+R I
Sbjct: 304 RTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESIRTI 363

Query: 365 I 365
           +
Sbjct: 364 L 364

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

 Score =  355 bits (912), Expect = e-121
 Identities = 169/367 (46%), Positives = 237/367 (64%), Gaps = 12/367 (3%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
            G+PL IEE++VE P+  E+ ++I+ T +CH+D  F  S  D P+   PVI GHE  G+V
Sbjct: 10  AGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDA-FTLSGAD-PEGVFPVILGHEGAGIV 67

Query: 65  ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKF----GRGYRPNMPRDGTSR 120
           E+VGE V  VK  D V+P++  +CGEC+ C S K+N C       G+G  P    DGTSR
Sbjct: 68  EAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMP----DGTSR 123

Query: 121 FRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAG 180
           F    G  I+H++  S+F+EY+VV    + KI P  PL   CLL CGV+TG+GA    A 
Sbjct: 124 F-SKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAK 182

Query: 181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 240
           VE G TVA+FGLG +GL+V +GAR+ +AS+II +DINP KFE+ KK G TD +NP    D
Sbjct: 183 VEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPND-YD 241

Query: 241 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE 300
           K + +VI E+TDGG DY FECIG  +VM  A     +GWG+++I+GV   G  IS    +
Sbjct: 242 KPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQ 301

Query: 301 ILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS 360
           ++ GR   G+ FGG+K R+++  + ++Y+  E+ L +F+TH +   DIN+AFDL+ EGKS
Sbjct: 302 LVTGRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS 361

Query: 361 LRCIIWM 367
           +R +I  
Sbjct: 362 IRTVIHY 368

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score =  341 bits (876), Expect = e-116
 Identities = 144/363 (39%), Positives = 198/363 (54%), Gaps = 11/363 (3%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
            GKPL IEE+E++ P   E+ ++I    LCHSD+       DLP  PLP + GHE  GVV
Sbjct: 9   VGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTG--DLP-APLPAVLGHEGAGVV 65

Query: 65  ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFREL 124
           E VG  V  VK  D V+  +   CG CR C   + N C   G G       DGT RF   
Sbjct: 66  EEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDL-GAGILGGQLPDGTRRFT-A 123

Query: 125 KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVG 184
            G+ +     + +F EY+VV    VVKI   IPL  A LL CGV+TGVGA    A V  G
Sbjct: 124 DGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNTARVRPG 183

Query: 185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVS 244
            TVA+ G G VGL   +GAR+  AS+II VD  PEK E+ ++FG T  +N     +    
Sbjct: 184 DTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNA---SEDDAV 240

Query: 245 QVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-L 302
           + ++++TDG GADY FE +G  + +  A   +R+G G  V++G+   G  +SL ++E+ L
Sbjct: 241 EAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGETVSLPALELFL 299

Query: 303 KGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLR 362
             + + G+ +G   PR DI  L   Y    L L E +T   S  +IN+AF  +L G++ R
Sbjct: 300 SEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENAR 359

Query: 363 CII 365
            +I
Sbjct: 360 GVI 362

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score =  263 bits (674), Expect = 2e-85
 Identities = 136/363 (37%), Positives = 199/363 (54%), Gaps = 15/363 (4%)

Query: 7   KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVES 66
           +PLVIEE+E++PP   E+ +KI    LCHSD++      D P+ PLP+  GHEA GVV  
Sbjct: 19  RPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVING--DRPR-PLPMALGHEAAGVVVE 75

Query: 67  VGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRD---GTSRFRE 123
           VGE V +++  D V+ +F   CG CR C   +   C     G   N       G  R R 
Sbjct: 76  VGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALC---EPGAAANGAGTLLSGGRRLRL 132

Query: 124 LKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEV 183
             G++ HH L +S+F EY+VV    VVKI   +PL IA L  C V TGVGA    AGV  
Sbjct: 133 RGGEINHH-LGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRP 191

Query: 184 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTV 243
           G +VA+ GLG VGL+   GA    AS+++ VD+N +K  + ++ G T  +N    GD   
Sbjct: 192 GQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNA---GDPNA 248

Query: 244 SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL- 302
            + ++E+T GG DY FE  G    +  A+  +R G G TV  G+    + +S+ ++ ++ 
Sbjct: 249 VEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSVPALSLVA 307

Query: 303 KGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLR 362
           + R++ G+Y G   PR DI      YL   L + + +TH +   +IN+ FD L  G+++R
Sbjct: 308 EERTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVR 367

Query: 363 CII 365
            +I
Sbjct: 368 QVI 370

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score =  253 bits (648), Expect = 1e-81
 Identities = 122/361 (33%), Positives = 184/361 (50%), Gaps = 19/361 (5%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
           PG P V+E++E++ P+  E+ ++I+ T +CH+D+        LP  PLP + GHE  GVV
Sbjct: 11  PGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVV--RDGGLP-TPLPAVLGHEGAGVV 67

Query: 65  ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKF----GRGYRPNMPRDGTSR 120
           E+VG  V  +K  D V+  F   CGEC +C S     C  F      G RP    DG++ 
Sbjct: 68  EAVGSAVTGLKPGDHVVLSF-ASCGECANCLSGHPAYCENFFPLNFSGRRP----DGSTP 122

Query: 121 FRELKGDVIH-HFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVA 179
                G  +H HF   SSF  Y+VV   +VVK+   +PL +   L CG+ TG GA   V 
Sbjct: 123 LSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQTGAGAVLNVL 182

Query: 180 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG 239
               GS++A+FG GAVGLA    A++   + II VDI   + E+ K+ G T  INP    
Sbjct: 183 KPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINPKEED 242

Query: 240 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI 299
              +   I+E+T GG DY  +  G+ +V+  A ++     G   ++G    G+ ++L+  
Sbjct: 243 ---LVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEVTLDVN 298

Query: 300 EIL-KGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEG 358
           ++L  G+++ G   G   P+  I  L + Y   +    + +T    F DIN+A      G
Sbjct: 299 DLLVSGKTIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLVTF-YPFEDINQAIADSESG 357

Query: 359 K 359
           K
Sbjct: 358 K 358

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score =  242 bits (620), Expect = 2e-77
 Identities = 137/367 (37%), Positives = 197/367 (53%), Gaps = 15/367 (4%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSST-DLPKLPLPVIFGHEAVGV 63
           PG+P  +EEIE++ PKA E+ +K++ + LCHSD       T DLP    P++ GHE  GV
Sbjct: 10  PGQPWEVEEIELDDPKAGEVLVKLVASGLCHSD---EHLVTGDLPMPRYPILGGHEGAGV 66

Query: 64  VESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRE 123
           V  VG  V  VK  D V+  F   CG CR C +   N C         +   DGT RF  
Sbjct: 67  VTKVGPGVTGVKPGDHVVLSFIPACGRCRWCSTGLQNLCDLGAALLTGSQISDGTYRFHA 126

Query: 124 LKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEV 183
              DV    L + +F+EY+VV    VVKI   IPL  ACL+ CGV TG G+A  +A V  
Sbjct: 127 DGQDVGQMCL-LGTFSEYTVVPEASVVKIDDDIPLDKACLVGCGVPTGWGSAVNIADVRP 185

Query: 184 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTV 243
           G TV + G+G VG+   +GA +  A K+I VD    K E   KFG T     A+  +   
Sbjct: 186 GDTVVVMGIGGVGINAVQGAAVAGARKVIAVDPVEFKREQALKFGATHAF--ASMEEAV- 242

Query: 244 SQVIKEMTDG-GADYCFECIGLT--SVMNDAFNSSREGWGKTVILGV-EMHGSPISLNSI 299
            Q+++E+T+G GAD     +G      + +A +++R+G G+ V+ G+  M    + +N  
Sbjct: 243 -QLVRELTNGQGADKTIITVGEVDGEHIAEALSATRKG-GRVVVTGLGPMADVDVKVNLF 300

Query: 300 EI-LKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEG 358
           E+ L  + + GT FGG  PR+DI  L + Y   +L L E IT   +   IN+ +  +L+G
Sbjct: 301 ELTLLQKELQGTLFGGANPRADIPRLLELYRAGKLKLDELITRTYTLDQINEGYQDMLDG 360

Query: 359 KSLRCII 365
           K++R +I
Sbjct: 361 KNIRGVI 367

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score =  201 bits (514), Expect = 1e-61
 Identities = 118/369 (31%), Positives = 174/369 (47%), Gaps = 19/369 (5%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
           P  PL IEEI V  PK  EI I++    +CHSD+   K   +LP  P P + GHE  G V
Sbjct: 9   PNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKG--ELP-FPPPFVLGHEISGEV 65

Query: 65  ESVGEYVE---EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR-PNMPRDGTSR 120
             VG  VE    +   D V+  F   CG+CR C   K N C  F    R      DGT+R
Sbjct: 66  VEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTR 125

Query: 121 FRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAG 180
              L G  ++ +       EY+VV  T +  +   +    + +L C   T  GA    A 
Sbjct: 126 LFRLDGGPVYMYSM-GGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYGALKHAAD 184

Query: 181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 240
           V  G TVA+ G+G VG +  + A+   AS II VD+  EK    K+ G T  +N A    
Sbjct: 185 VRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVNAA---K 241

Query: 241 KTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGS--PISLN 297
           +     I+E+T G G D   E +G       A +  R+G G+ V++G+   G+   I + 
Sbjct: 242 EDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGATAEIPIT 300

Query: 298 SIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLE 357
            + + +G  + G+Y  G +PR D+  L       +L+    +TH+    +IN+A++ L +
Sbjct: 301 RL-VRRGIKIIGSY--GARPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRK 357

Query: 358 GK-SLRCII 365
           G    R I+
Sbjct: 358 GLIHGRAIV 366

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score =  190 bits (483), Expect = 3e-57
 Identities = 119/366 (32%), Positives = 176/366 (48%), Gaps = 20/366 (5%)

Query: 3   RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSS-TDLPKLPLPVIFGHEAV 61
           R  G P+ +E I V  P   E+ + I    +CH+D+ + +    D      P + GHEA 
Sbjct: 8   RSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIND----EFPFLLGHEAA 63

Query: 62  GVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRF 121
           GVVE+VGE V +V   D V+  +   CG+CR CK  +   C       +     DGT   
Sbjct: 64  GVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGT--- 120

Query: 122 RELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGV 181
            EL        L I +F E ++V      K+ P      A LL CGV  G+GAA    GV
Sbjct: 121 -ELSPA-----LGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNTGGV 174

Query: 182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 241
           + G +VA+ G G VG A   GA L  ASKII VDI+  K E  ++FG T  +N ++  D 
Sbjct: 175 KRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVN-SSGTD- 232

Query: 242 TVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE 300
              + I+ +T G GAD   + +G       AF  +R+  G  V++GV      + L  ++
Sbjct: 233 -PVEAIRALTGGFGADVVIDAVGRPETYKQAFY-ARDLAGTVVLVGVPTPDMTLELPLLD 290

Query: 301 IL-KGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGK 359
           +  +G ++  +++G   P  D   L   YL   L L  F+T  +   D+ +AFD +  G 
Sbjct: 291 VFGRGGALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGD 350

Query: 360 SLRCII 365
            LR ++
Sbjct: 351 VLRSVV 356

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score =  175 bits (445), Expect = 1e-51
 Identities = 114/376 (30%), Positives = 166/376 (44%), Gaps = 59/376 (15%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
            G+PL IEE+ V  P   E+ IK+    +CH+D+   K   D P   LP+I GHE VG V
Sbjct: 12  FGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKG--DWPVPKLPLIPGHEIVGTV 69

Query: 65  ESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTC-SKFGRGYRPNMPRDGTSRFR 122
             VGE V  +K  D V +      CGEC  C+S   N C ++   GY      DG     
Sbjct: 70  VEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYT----TDG----- 120

Query: 123 ELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVE 182
                          + EY VV   +VVKI   + L  A  L C   T   A  K A V+
Sbjct: 121 --------------GYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRAL-KKANVK 165

Query: 183 VGSTVAIFGLGAVG-----LAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPAT 237
            G  VA+ G G +G      A A GA       +I +  + EK E+ KK G    IN + 
Sbjct: 166 PGKWVAVVGAGGLGHMAVQYAKAMGAE------VIAITRSEEKLELAKKLGADHVINSS- 218

Query: 238 CGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLN 297
             D    + +KE+    AD   + +G  + +  +  + R G G  V++G+   G    L 
Sbjct: 219 --DSDALEAVKEI----ADAIIDTVG-PATLEPSLKALRRG-GTLVLVGLPGGGPIPLLP 270

Query: 298 -SIEILKGRSVCGTYFGGLKPRSDIATLAQKYLD--KELNLGEFITHEVSFHDINKAFDL 354
             + ILK  S+ G+  G    R+D+    ++ LD   E  +   I   +   +IN+A++ 
Sbjct: 271 AFLLILKEISIVGSLVGT---RADL----EEALDFAAEGKIKPEILETIPLDEINEAYER 323

Query: 355 LLEGKSL-RCIIWMDK 369
           + +GK   R +I M  
Sbjct: 324 MEKGKVRGRAVIDMSS 339

Length = 339

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  170 bits (434), Expect = 5e-51
 Identities = 74/294 (25%), Positives = 121/294 (41%), Gaps = 32/294 (10%)

Query: 23  EIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP 82
           E+ +++    LC +D+   +     P   LP+I GHE  GVV  VG  V  VK  D V+ 
Sbjct: 1   EVLVRVEAAGLCGTDLHIRRG-GYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVV 59

Query: 83  IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYS 142
           + +  CG C  C+          G         DG                    F EY 
Sbjct: 60  LPNLGCGTCELCR-----ELCPGGGILGEG--LDGG-------------------FAEYV 93

Query: 143 VVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEG 202
           VV   ++V +   + L  A LL   ++T   A  +   ++ G TV + G G VGL  A+ 
Sbjct: 94  VVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQL 153

Query: 203 ARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 262
           A+    +++I  D + EK E+ K+ G    I+      +   + ++    GGAD   + +
Sbjct: 154 AKA-AGARVIVTDRSDEKLELAKELGADHVIDYKEEDLE---EELRLTGGGGADVVIDAV 209

Query: 263 GLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLK 316
           G    +  A    R G G+ V++G    G P+      + K  ++ G+  G  +
Sbjct: 210 GGPETLAQALRLLRPG-GRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTRE 262

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score =  168 bits (427), Expect = 5e-49
 Identities = 93/360 (25%), Positives = 149/360 (41%), Gaps = 31/360 (8%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
            G  + +EE     P   ++ I++  T +C SD+  ++           +I GHE VG V
Sbjct: 9   GGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPG-DIILGHEFVGEV 67

Query: 65  ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTS-RFRE 123
             VG  V   K  D V+   +  CG CR C++ + N C         N    G +     
Sbjct: 68  VEVGV-VRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLC--------ENPGFYGYAGLGGG 118

Query: 124 LKGDVIHHFLNISSFTEYSVVDITHVVKITP-HIPLGIACLLSCGVSTGVGAAWKVAGVE 182
           + G           F EY  V     +   P  I    A  L+  ++T      + A V 
Sbjct: 119 IDG----------GFAEYVRVPADFNLAKLPDGIDEEAA-ALTEPLATAYHGHAERAAVR 167

Query: 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT 242
            G TV + G G +GL     A+L  AS +I VD +PE+ E+ K+ G  D +   +  D  
Sbjct: 168 PGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDD-- 225

Query: 243 VSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI 301
               I E+T G GAD   E +G    ++ A  + R G G  V++GV   G  I L +  +
Sbjct: 226 AGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGV-YGGEDIPLPAGLV 283

Query: 302 L-KGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS 360
           + K  ++ G+     +   D           +++  + ITH +   D  +A++L  + K 
Sbjct: 284 VSKELTLRGSLRPSGRE--DFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKE 341

Length = 350

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score =  168 bits (427), Expect = 7e-49
 Identities = 95/372 (25%), Positives = 161/372 (43%), Gaps = 32/372 (8%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
           PGKPL I E+ +   +   + +++    +C SDV         P++PLP+I GHE VG V
Sbjct: 9   PGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAG--RRPRVPLPIILGHEGVGRV 66

Query: 65  ESVGEYV------EEVKERDLVLPIFHRDCGECRDCKSSKSNTC-SKFGRGYRPNMPRDG 117
            ++G  V      E +K  D V       CG C  C       C ++   G+  +     
Sbjct: 67  VALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPH 126

Query: 118 TSRFRELKGDVIHHFLNISSFTEYSVVDI-THVVKITPHIPLGIACLLSCGVSTGVGAAW 176
            S                  + E+  +   T +V++  ++P  +A   +C ++T V AA 
Sbjct: 127 LS----------------GGYAEHIYLPPGTAIVRVPDNVPDEVAAPANCALAT-VLAAL 169

Query: 177 KVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 235
             AG V  G TV + G G +GL     A+L  A ++I +D +PE+ E+ ++FG    I+ 
Sbjct: 170 DRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDI 229

Query: 236 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPI 294
               D     +++++T G GAD   E  G  + + +     R G G  V++G       +
Sbjct: 230 DELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVAPAGTV 288

Query: 295 SLNSIEI-LKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFD 353
            L+   I  K  ++ G +              ++  D+     E +TH     DIN+A +
Sbjct: 289 PLDPERIVRKNLTIIGVHNYDPSHLYRAVRFLERTQDRFP-FAELVTHRYPLEDINEALE 347

Query: 354 LLLEGKSLRCII 365
           L   G +L+ +I
Sbjct: 348 LAESGTALKVVI 359

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score =  165 bits (421), Expect = 3e-48
 Identities = 101/370 (27%), Positives = 157/370 (42%), Gaps = 52/370 (14%)

Query: 9   LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG 68
           + +EE+ V  P   E+ +K+    +C +DV   +      K P   I GHE  G +  VG
Sbjct: 12  VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPR--ILGHEIAGEIVEVG 69

Query: 69  EYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTC---SKFGRGYRPNMPRDGTSRFRELK 125
           + V   K  D V    H  CGEC  C     N C    KFG  Y      DG        
Sbjct: 70  DGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLY------DG-------- 115

Query: 126 GDVIHHFLNISSFTEYSVVDITHVVK-ITPHIPLGI----ACL---LSCGVSTGVGAAWK 177
                       F EY  V    V +     +P  +    A L   L+C +      A +
Sbjct: 116 -----------GFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALVEPLACCI-----NAQR 159

Query: 178 VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPAT 237
            AG++ G TV + G G +GL  A  A+ + A K+I  D+N  + E  KK G    I+ A 
Sbjct: 160 KAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAA- 218

Query: 238 CGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISL 296
             ++ + + ++E+TDG GAD      G       A    R+G G+ +  G    GS +++
Sbjct: 219 --EEDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFFGGLPKGSTVNI 275

Query: 297 NSIEIL-KGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLL 355
           +   I  +  ++ G+Y        D     +     ++++ + ITH     DI +AF+L 
Sbjct: 276 DPNLIHYREITITGSYAAS---PEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELA 332

Query: 356 LEGKSLRCII 365
            +GKSL+ +I
Sbjct: 333 ADGKSLKIVI 342

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score =  160 bits (407), Expect = 3e-46
 Identities = 91/366 (24%), Positives = 157/366 (42%), Gaps = 49/366 (13%)

Query: 9   LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG 68
           L  E+I    P   E+ +K+    +C SD+  +  +        P++ GHE  G VE VG
Sbjct: 12  LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTG---AYHPPLVLGHEFSGTVEEVG 68

Query: 69  EYVEEVKERDLV--LPIFHRDCGECRDCKSSKSNTCSK---FGRGYRPNMPRDGTSRFRE 123
             V+++   D V   P+    CG+C  CK  + + CS     G        RDG      
Sbjct: 69  SGVDDLAVGDRVAVNPLLP--CGKCEYCKKGEYSLCSNYDYIG------SRRDG------ 114

Query: 124 LKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEV 183
                        +F EY  V   +++KI  H+    A ++    +  + A    AG+ +
Sbjct: 115 -------------AFAEYVSVPARNLIKIPDHVDYEEAAMIE-PAAVALHAVRL-AGITL 159

Query: 184 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTV 243
           G TV + G G +GL   +  ++  A ++I VDI+ EK  + ++ G  D INP     +  
Sbjct: 160 GDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKEEDVEK- 218

Query: 244 SQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGV---EMHGSPISLNSI 299
              ++E+T+G GAD   E  G  + +  A   +R G GK V++G+   ++  S  +   I
Sbjct: 219 ---VRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYGDVTLSEEAFEKI 274

Query: 300 EILKGRSVCGT--YFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLE 357
            + K  ++ G+   +    P  +  T        ++ +   ITH +   D   AF+ L +
Sbjct: 275 -LRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLAD 333

Query: 358 GKSLRC 363
            +    
Sbjct: 334 REEFSG 339

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score =  158 bits (402), Expect = 2e-45
 Identities = 117/370 (31%), Positives = 164/370 (44%), Gaps = 43/370 (11%)

Query: 5   PGKPLVIEEIEVEPPKAWEIR---IKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAV 61
           PGK   I   EV  PK        +++  TS+C SD+  ++     P     +I GHE V
Sbjct: 9   PGK---IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGV--PGAKHGMILGHEFV 63

Query: 62  GVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRF 121
           G V  VG  V+ +K  D V       CG CR C+      C     G++     DG    
Sbjct: 64  GEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGG--- 120

Query: 122 RELKGDVIHHFLNISSFTEYSVV---DITHVVKITPHIPLGIACLLSCGVSTGVGAAWKV 178
                             EY  V   D  ++ KI   +P   A +LS  + TG   A ++
Sbjct: 121 ----------------QAEYVRVPYAD-MNLAKIPDGLPDEDALMLSDILPTGFHGA-EL 162

Query: 179 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATC 238
           AG++ GSTVA+ G G VGL    GARL  A++II VD NPE+ ++ K+ G TD INP   
Sbjct: 163 AGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPK-- 220

Query: 239 GDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLN 297
               V Q I E+T G G D   E +G       A    R G G    +GV  +G P  L 
Sbjct: 221 NGDIVEQ-ILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGV--YGKPDPLP 276

Query: 298 SIEILKGRSVCGTYFGGLKP-RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLL 356
            +    G+++  T+  GL P R+ +  L     + +++  + ITH     DI KA+  L 
Sbjct: 277 LLGEWFGKNL--TFKTGLVPVRARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYR-LF 333

Query: 357 EGKSLRCIIW 366
           + K   CI  
Sbjct: 334 DNKPDGCIKV 343

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score =  158 bits (401), Expect = 3e-45
 Identities = 91/359 (25%), Positives = 140/359 (38%), Gaps = 45/359 (12%)

Query: 6   GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVE 65
              LV+EE+ V  P   E+ +K+    +CHSD+             LP+  GHE  G V 
Sbjct: 11  KGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHIL-DGGVPTLTKLPLTLGHEIAGTVV 69

Query: 66  SVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELK 125
            VG  V   K  D V       CG C  C+  + N C        P +  DG        
Sbjct: 70  EVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCL---NQGMPGLGIDGG------- 119

Query: 126 GDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGS 185
                       F EY VV    +V +   +P   A + +  V T   A  +   V+ G 
Sbjct: 120 ------------FAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGE 167

Query: 186 TVAIFGLGAVGL-----AVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 240
           TV + GLG +GL     A A GA       +I VDI  EK E+ K+ G  + +N     D
Sbjct: 168 TVLVIGLGGLGLNAVQIAKAMGA------AVIAVDIKEEKLELAKELGADEVLNSL---D 218

Query: 241 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE 300
            +          GG D  F+ +G      DA  + + G G+ V++G+      + L+ + 
Sbjct: 219 DSPKDKKAAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRDKLTVDLSDL- 276

Query: 301 ILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGK 359
           I +   + G++ GG     D+  +       +L+            +I +  + L +GK
Sbjct: 277 IARELRIIGSF-GGT--PEDLPEVLDLIAKGKLDP---QVETRPLDEIPEVLERLHKGK 329

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score =  154 bits (391), Expect = 9e-44
 Identities = 94/365 (25%), Positives = 163/365 (44%), Gaps = 51/365 (13%)

Query: 9   LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG 68
           L +EE+ V  P   E+ IK+    +C +D+  ++          P++ GHE  GVV +VG
Sbjct: 12  LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEG---EFGAAPPLVPGHEFAGVVVAVG 68

Query: 69  EYVEEVKERDLVL--P-IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELK 125
             V   K  D V   P I+   CGEC  C+  + N C            R+G        
Sbjct: 69  SKVTGFKVGDRVAVDPNIY---CGECFYCRRGRPNLCENLT-AVGVT--RNG-------- 114

Query: 126 GDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LSCGVSTGVGAAWKVAGVE 182
                       F EY VV    V KI  ++    A L   LSC V         + G++
Sbjct: 115 -----------GFAEYVVVPAKQVYKIPDNLSFEEAALAEPLSCAVH-----GLDLLGIK 158

Query: 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT 242
            G +V +FG G +GL +A+  +LN AS++   + N EK E+ KK G T+ ++P     + 
Sbjct: 159 PGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDP----SRE 214

Query: 243 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL 302
             +  KE    G D   E  G+   +  A   +R G G  ++ GV    + +S++  EI 
Sbjct: 215 DPEAQKEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPDARVSISPFEIF 273

Query: 303 -KGRSVCGTYFGGLKPRSDIATLAQKYLD-KELNLGEFITHEVSFHDINKAFDLLLEGKS 360
            K  ++ G++   + P +    +A   L+  ++++   ++H +   ++ +A + +  G +
Sbjct: 274 QKELTIIGSF---INPYTFPRAIA--LLESGKIDVKGLVSHRLPLEEVPEALEGMRSGGA 328

Query: 361 LRCII 365
           L+ ++
Sbjct: 329 LKVVV 333

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score =  151 bits (385), Expect = 7e-43
 Identities = 99/373 (26%), Positives = 151/373 (40%), Gaps = 66/373 (17%)

Query: 11  IEEIEVEPPKAWEIRIKILCTSLCHSDV-------TFW--KSSTDLPKLPLPVIFGHEAV 61
           +EE+   P K  E++IK+    +C SD+        F   +    L     PV  GHE  
Sbjct: 14  VEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFS 73

Query: 62  GVVESVGEYVEEVKERDLVL--PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTS 119
           GVV  VG  V   K  D V+  P     CG C  CK    N C   G             
Sbjct: 74  GVVVEVGSGVTGFKVGDRVVVEPTIK--CGTCGACKRGLYNLCDSLG------------- 118

Query: 120 RFRELKGDVIHHFLNISS----FTEYSVVDITHVVKITPHIPLGIACL---LSCGVSTGV 172
                       F+ +      F EY VV   HV K+  ++PL  A L   L+       
Sbjct: 119 ------------FIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALVEPLAVAWH--- 163

Query: 173 GAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 232
             A + +G + G T  + G G +GL      +   ASKII  + +  + E+ ++ G T  
Sbjct: 164 --AVRRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIV 221

Query: 233 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG 291
           ++P       V   ++++T G G D  F+C G+ + ++ A ++ R   G  V + +    
Sbjct: 222 LDPTEVD---VVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAI--WE 275

Query: 292 SPISLNSIEI-LKGRSVCGT--YFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDI 348
            PIS N  ++ LK +++ G+  Y         I  LA   +D E      IT  +   DI
Sbjct: 276 KPISFNPNDLVLKEKTLTGSICYTREDFEEV-IDLLASGKIDAE----PLITSRIPLEDI 330

Query: 349 -NKAFDLLLEGKS 360
             K F+ L+  K 
Sbjct: 331 VEKGFEELINDKE 343

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score =  150 bits (381), Expect = 2e-42
 Identities = 112/359 (31%), Positives = 160/359 (44%), Gaps = 43/359 (11%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
           P KPL IEE+    P   E+ IK+    +C+ D+ FWK     P+   P+I GHE VG V
Sbjct: 9   PNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGF--FPRGKYPLILGHEIVGTV 66

Query: 65  ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFREL 124
           E VGE VE  K  D V+  ++  CG+C  C S + N C                 R R  
Sbjct: 67  EEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLC-----------------RNRAE 109

Query: 125 KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVG 184
            G+ +        F EY  V    +VK+  ++    A L +C V T V A  K AGV+ G
Sbjct: 110 YGEEVDGG-----FAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHAL-KRAGVKKG 163

Query: 185 STVAI-FGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTV 243
            TV +    G VG+   + A+    +++I V  +PEK +I K+ G    I+    G K  
Sbjct: 164 DTVLVTGAGGGVGIHAIQLAKA-LGARVIAVTRSPEKLKILKELGADYVID----GSKFS 218

Query: 244 SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-IL 302
             V K    GGAD   E +G +  + ++  S  +G G+ V++G  +   P  L     IL
Sbjct: 219 EDVKKL---GGADVVIELVG-SPTIEESLRSLNKG-GRLVLIG-NVTPDPAPLRPGLLIL 272

Query: 303 KGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL 361
           K   + G+             L    L KE  +   I   VS  DIN+A + L  GK +
Sbjct: 273 KEIRIIGS--ISATKADVEEALK---LVKEGKIKPVIDRVVSLEDINEALEDLKSGKVV 326

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score =  148 bits (375), Expect = 2e-41
 Identities = 102/364 (28%), Positives = 156/364 (42%), Gaps = 51/364 (14%)

Query: 6   GKPLVIEEIEVEPP--KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGV 63
            KP  +E +++  P   A E+ +++    +C SD+  +      P    P I GHE  G 
Sbjct: 7   EKPGRLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRN--PFASYPRILGHELSGE 64

Query: 64  VESVGEYVEEVKERDLV--LPIFHRDCGECRDCKSSKSNTCSK---FGRGYRPNMPRDGT 118
           V  VGE V  +K  D V   P     CGEC  C+  + N C      G      + RDG 
Sbjct: 65  VVEVGEGVAGLKVGDRVVVDPYIS--CGECYACRKGRPNCCENLQVLG------VHRDGG 116

Query: 119 SRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKV 178
                              F EY VV    ++ +   + L  A L+   ++ G  A  + 
Sbjct: 117 -------------------FAEYIVVPADALL-VPEGLSLDQAALVEP-LAIGAHAVRR- 154

Query: 179 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATC 238
           AGV  G TV + G G +GL V + A+  R +++I VDI+ E+ E  ++ G  D IN    
Sbjct: 155 AGVTAGDTVLVVGAGPIGLGVIQVAKA-RGARVIVVDIDDERLEFARELGADDTINV--- 210

Query: 239 GDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLN 297
           GD+ V+  ++E+TDG GAD   +  G  + M +A      G G+ V++G+     P++  
Sbjct: 211 GDEDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGL--SKGPVTFP 267

Query: 298 SIEILKGRSVCGTYFGG-LKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLL 356
             E  K      T  G     R D   +       +++    ITH   F D+ +AFDL  
Sbjct: 268 DPEFHKKEL---TILGSRNATREDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWE 324

Query: 357 EGKS 360
               
Sbjct: 325 APPG 328

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score =  144 bits (365), Expect = 6e-40
 Identities = 108/392 (27%), Positives = 160/392 (40%), Gaps = 91/392 (23%)

Query: 7   KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKS-STDLPKLPLPVIFGHEAVGVVE 65
             L +EE  +  P   E+ +++    +C SDV ++K        +  P++ GHE+ G V 
Sbjct: 8   GDLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVV 67

Query: 66  SVGEYVEEVKERDLV-----LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNM------P 114
           +VG  V  +K  D V     +P     C  C  CKS + N C        P+M      P
Sbjct: 68  AVGSGVTHLKVGDRVAIEPGVP-----CRTCEFCKSGRYNLC--------PDMRFAATPP 114

Query: 115 RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI-----ACL--LSCG 167
            DGT                      Y    + H       +P  +     A +  LS G
Sbjct: 115 VDGT-------------------LCRY----VNHPADFCHKLPDNVSLEEGALVEPLSVG 151

Query: 168 VSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF 227
           V      A + AGV  G TV +FG G +GL  A  A+   A+K++  DI+P + E  K+ 
Sbjct: 152 V-----HACRRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKEL 206

Query: 228 GITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILG 286
           G T  +N  T      ++ I E+  G G D   EC G  S +  A  ++R G G  V++G
Sbjct: 207 GATHTVNVRTEDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVG 265

Query: 287 VEMHGSP--------ISLNSIEILKGRSV---CGTYFGGLKPRSDIATLAQKYLDKELNL 335
           +   G P         SL  I+I   R V     TY     P + I  LA   +D    +
Sbjct: 266 M---GKPEVTLPLSAASLREIDI---RGVFRYANTY-----PTA-IELLASGKVD----V 309

Query: 336 GEFITHEVSFHDINKAFDLLLEGK--SLRCII 365
              ITH     D  +AF+   +GK   ++ +I
Sbjct: 310 KPLITHRFPLEDAVEAFETAAKGKKGVIKVVI 341

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score =  142 bits (361), Expect = 2e-39
 Identities = 90/357 (25%), Positives = 148/357 (41%), Gaps = 47/357 (13%)

Query: 6   GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVE 65
           G+PL I E+    P    + +++    +C SD   W+       LP   + GHE  GVV 
Sbjct: 10  GEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPH--VPGHEFAGVVV 67

Query: 66  SVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELK 125
            VGE V   +  D V   F   CG C  C++  SN C       +P     G        
Sbjct: 68  EVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCE---HQVQPGFTHPG-------- 116

Query: 126 GDVIHHFLNISSFTEYSVVD--ITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEV 183
                      SF EY  V     ++V++   +    A  L C  +T   A    A V+ 
Sbjct: 117 -----------SFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRALVHQARVKP 165

Query: 184 GSTVAIFGLGAVGL-----AVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATC 238
           G  VA+ G G VGL     A A GAR      +I VDI+ +K E+ ++ G    +N +  
Sbjct: 166 GEWVAVHGCGGVGLSAVMIASALGAR------VIAVDIDDDKLELARELGAVATVNAS-- 217

Query: 239 GDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGV---EMHGSPIS 295
             + V+  ++++T GGA    + +G+     ++  S R+  G+ V +G+   E  G  + 
Sbjct: 218 EVEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLGEEAGVALP 276

Query: 296 LNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAF 352
           ++ + + +   + G++  G+      A LA     K L+    +   +S  +   A 
Sbjct: 277 MDRV-VARELEIVGSH--GMPAHRYDAMLALIASGK-LDPEPLVGRTISLDEAPDAL 329

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score =  142 bits (360), Expect = 2e-39
 Identities = 92/360 (25%), Positives = 149/360 (41%), Gaps = 37/360 (10%)

Query: 9   LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG 68
           + + E  V  P   E+ +++  + LC SD+ ++      P     VI GHE  GVV +VG
Sbjct: 12  VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQ-GVIPGHEPAGVVVAVG 70

Query: 69  EYVEEVKERDLVLPIFHRD-CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGD 127
             V   +  D V+  +H   CG CR+C+      C+     Y  N  RDG          
Sbjct: 71  PGVTHFRVGDRVMV-YHYVGCGACRNCRRGWMQLCTSKRAAYGWN--RDG---------- 117

Query: 128 VIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTV 187
                       EY +V    ++ +   +      LL CG+ T    A +  GV    TV
Sbjct: 118 ---------GHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTA-YHALRRVGVSGRDTV 167

Query: 188 AIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVI 247
            + G G VGL     AR   A  +IGVD +PE+ E+ K  G    IN      + + ++ 
Sbjct: 168 LVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDDVQEIRELT 227

Query: 248 KEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE--ILKGR 305
                 GAD   EC G T+    A  + R  WG+ V++G    G  +++      I K R
Sbjct: 228 S---GAGADVAIECSGNTAARRLALEAVRP-WGRLVLVG---EGGELTIEVSNDLIRKQR 280

Query: 306 SVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
           ++ G+++  +    + A         +L +   +TH        +A+ L  +G+S + + 
Sbjct: 281 TLIGSWYFSVPDMEECAEFL---ARHKLEVDRLVTHRFGLDQAPEAYALFAQGESGKVVF 337

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  138 bits (349), Expect = 1e-37
 Identities = 87/323 (26%), Positives = 133/323 (41%), Gaps = 56/323 (17%)

Query: 6   GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLP-KLPLPVIFGHEAVGVV 64
            KP  ++++ V  P   E+ +K+  + +CH+D+       D P K  LP+I GHE  GVV
Sbjct: 11  EKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALG--DWPVKPKLPLIGGHEGAGVV 68

Query: 65  ESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR--DGTSRF 121
            +VG  V  +K  D V +   +  CG+C  C++     C       + N     DGT   
Sbjct: 69  VAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPN-----QKNSGYTVDGT--- 120

Query: 122 RELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGV 181
                           F EY++ D  +V  I   +    A  L C   T V  A K AG+
Sbjct: 121 ----------------FAEYAIADARYVTPIPDGLSFEQAAPLLCAGVT-VYKALKKAGL 163

Query: 182 EVGSTVAIFGLG------AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 235
           + G  V I G G       V  A A G R      +I +D+  EK E+ K+ G   F++ 
Sbjct: 164 KPGDWVVISGAGGGLGHLGVQYAKAMGLR------VIAIDVGDEKLELAKELGADAFVDF 217

Query: 236 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGV----EMH 290
                    + +KE+T G GA          +    A +  R G G  V +G+     + 
Sbjct: 218 KK---SDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLPPGGFIP 273

Query: 291 GSPISLNSIEILKGRSVCGTYFG 313
             P  L    +L+G ++ G+  G
Sbjct: 274 LDPFDL----VLRGITIVGSLVG 292

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score =  137 bits (347), Expect = 2e-37
 Identities = 107/367 (29%), Positives = 149/367 (40%), Gaps = 52/367 (14%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDV-----TFWKSSTDLPKLPLPVIFGHE 59
            G    + E+ V  P   E+ IK+L  S+C +DV       W  S   P    P+IFGHE
Sbjct: 9   AGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKP----PLIFGHE 64

Query: 60  AVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSK---FGRGYRPNMPRD 116
             G V  VGE V  VK  D V    H  CG+C  C++   + C      G      +  D
Sbjct: 65  FAGEVVEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILG------VDTD 118

Query: 117 GTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LSCGVSTGVG 173
           G                    F EY VV   ++ K    IP  IA +   L   V T + 
Sbjct: 119 GC-------------------FAEYVVVPEENLWKNDKDIPPEIASIQEPLGNAVHTVL- 158

Query: 174 AAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 233
                AG   G +V I G G +GL     A+   AS +I  D NP + E+ KK G    I
Sbjct: 159 -----AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVI 213

Query: 234 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP 293
           NP    ++ V +V       G D   E  G    +     +   G G+  ILG+      
Sbjct: 214 NP---REEDVVEVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPPGPVD 269

Query: 294 ISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFD 353
           I LN++ I KG +V G    G K       ++      +++L   ITH++   D  +AF+
Sbjct: 270 IDLNNLVIFKGLTVQGIT--GRKMFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFE 327

Query: 354 LLLEGKS 360
           L+  GK 
Sbjct: 328 LMRSGKC 334

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score =  135 bits (343), Expect = 1e-36
 Identities = 97/368 (26%), Positives = 149/368 (40%), Gaps = 48/368 (13%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL----------PKLPLPV 54
           PGKPL   EI+   P   E+ +K+    +CHSD+  W    DL            + LP+
Sbjct: 9   PGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPL 68

Query: 55  IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP 114
           + GHE VG V +VG    +VK  D VL      CGEC  C +   N C+K          
Sbjct: 69  VLGHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAK---------- 118

Query: 115 RDGTSRFRELKGDVIHHFLNISS---FTEYSVVDITHVVKITPHIPLGIACLLSCGVSTG 171
                             L I     + EY +V  +  +     +   +A  L+C   T 
Sbjct: 119 ---------------GRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLACSGLTA 163

Query: 172 VGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD 231
             A  K+  +     V I G G +GL      +    + II VDI+  K E  K  G   
Sbjct: 164 YSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADV 223

Query: 232 FINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG 291
            +N +   D   ++ I +   GG D   + +  ++  + AF+   +G GK V++G+    
Sbjct: 224 VVNGS---DPDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGGE 279

Query: 292 SPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKA 351
           + + L  +  L+  ++ G+Y G L+   ++  LA     K   L      E    D+N A
Sbjct: 280 ATLPLPLL-PLRALTIQGSYVGSLEELRELVALA-----KAGKLKPIPLTERPLSDVNDA 333

Query: 352 FDLLLEGK 359
            D L  GK
Sbjct: 334 LDDLKAGK 341

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score =  132 bits (333), Expect = 1e-35
 Identities = 101/377 (26%), Positives = 156/377 (41%), Gaps = 53/377 (14%)

Query: 1   MQRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTF-----WKSSTDLPKLPLPVI 55
           M+  PG    + E+ V  P   E+ IK+L TS+C +DV       W  S     +  P +
Sbjct: 3   MKTKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSR----IKPPQV 58

Query: 56  FGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSK---FGRGYRPN 112
            GHE  G V  +G  VE +K  D V    H  CG+C  C+  + + C     FG      
Sbjct: 59  VGHEVAGEVVGIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFG------ 112

Query: 113 MPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LSCGVS 169
           +  DG                    F EY+VV   ++ K    IP   A +   L   V 
Sbjct: 113 VDTDGC-------------------FAEYAVVPAQNIWKNPKSIPPEYATIQEPLGNAVH 153

Query: 170 TGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI 229
           T +      AG   G +V + G G +GL     A+ + A  +I  D N  + E+ KK G 
Sbjct: 154 TVL------AGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGA 207

Query: 230 TDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 288
           T  +NP     + V + + ++TDG G D   E  G    +     +   G G+  +LG+ 
Sbjct: 208 TYVVNPF---KEDVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLP 263

Query: 289 MHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDI 348
                I   +  I KG ++ G    G        T+++     +L+L   ITH+  F   
Sbjct: 264 PGKVTIDFTNKVIFKGLTIYGIT--GRHMFETWYTVSRLIQSGKLDLDPIITHKFKFDKF 321

Query: 349 NKAFDLLLEGKSLRCII 365
            K F+L+  G++ + I+
Sbjct: 322 EKGFELMRSGQTGKVIL 338

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score =  130 bits (328), Expect = 1e-34
 Identities = 92/353 (26%), Positives = 140/353 (39%), Gaps = 41/353 (11%)

Query: 14  IEVEPPKA--WEIRIKILCTSLCHSDV-TFWKSSTDLPKLPLPVIFGHEAVGVVESVGEY 70
           IE   P     +  ++    + C SDV T W      P     +I GHEAVGVVE VG  
Sbjct: 15  IEKPIPVCGPNDAIVRPTAVAPCTSDVHTVW---GGAPGERHGMILGHEAVGVVEEVGSE 71

Query: 71  VEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIH 130
           V++ K  D V+             +    +       G++ +  +DG             
Sbjct: 72  VKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGV------------ 119

Query: 131 HFLNISSFTEYSVVD--ITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVA 188
                  F EY  V+    ++  +   +    A +L   +STG   A ++A +++G TVA
Sbjct: 120 -------FAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFHGA-ELANIKLGDTVA 171

Query: 189 IFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIK 248
           +FG+G VGL    GARL  A +II V   P + E+ K++G TD ++        V Q I 
Sbjct: 172 VFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKNGD--VVEQ-IL 228

Query: 249 EMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSV 307
           ++T G G D      G       A    + G G    +        + +   E   G   
Sbjct: 229 KLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGEDDYLPIPREEWGVG--- 284

Query: 308 CGTYF--GGLKP--RSDIATLAQKYLDKELNLGEFITH-EVSFHDINKAFDLL 355
            G     GGL P  R  +  LA       ++  + +TH    F DI +A  L+
Sbjct: 285 MGHKTINGGLCPGGRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLM 337

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score =  123 bits (312), Expect = 2e-32
 Identities = 92/361 (25%), Positives = 144/361 (39%), Gaps = 51/361 (14%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
            G PL  EE+ V  P   E+ IKI    +CH+D+   +   D      P++ GHE VG V
Sbjct: 8   AGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEG--DWGGSKYPLVPGHEIVGEV 65

Query: 65  ESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSKF-GRGYRPNMPRDGTSRFR 122
             VG  VE  K  D V +      CG C  C+    N C K    GY       G     
Sbjct: 66  VEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYT----TQG----- 116

Query: 123 ELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPL-GIACLLSCGVSTGVGAAWKVAGV 181
                          + EY V D  + V +   +PL   A LL  G++  V +A + AG 
Sbjct: 117 --------------GYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGIT--VYSALRDAGP 160

Query: 182 EVGSTVAIFGLGAVG-LAVAEGARLNRA--SKIIGVDINPEKFEIGKKFGITDFINPATC 238
             G  VA+ G+G +G LAV    +  RA   + + +  +P+K E+ +K G  + ++    
Sbjct: 161 RPGERVAVLGIGGLGHLAV----QYARAMGFETVAITRSPDKRELARKLGADEVVDSGAE 216

Query: 239 GDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNS 298
            D       ++   GGAD     +   +    A    R G G+ V++G+           
Sbjct: 217 LD-------EQAAAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPESPPFSPDIF 268

Query: 299 IEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEG 358
             I+K +S+ G+  GG     +    A +   K       +         N+A++ + +G
Sbjct: 269 PLIMKRQSIAGSTHGGRADLQEALDFAAEGKVKP------MIETFPLDQANEAYERMEKG 322

Query: 359 K 359
            
Sbjct: 323 D 323

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score =  123 bits (310), Expect = 4e-32
 Identities = 98/368 (26%), Positives = 152/368 (41%), Gaps = 55/368 (14%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTF-----WKSSTDLPKLPLPVIFGHE 59
               L + ++ V  P   ++ IK+  T++C +DV       W   T    +P+P++ GHE
Sbjct: 9   AEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKT----IPVPMVVGHE 64

Query: 60  AVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSK-FGRGYRPNMPRDGT 118
            VG V  VG  V   K  D V    H  CG CR+C++ + + C    G G      R G 
Sbjct: 65  FVGEVVEVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVN----RPG- 119

Query: 119 SRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LSCGVSTGVGAA 175
                             +F EY V+   +V KI   IP  +A +       V T +  +
Sbjct: 120 ------------------AFAEYLVIPAFNVWKIPDDIPDDLAAIFDPFGNAVHTAL--S 159

Query: 176 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 235
           + +    VG  V I G G +G+  A  A+   A  ++  D+N  + E+ +K G T  +N 
Sbjct: 160 FDL----VGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNV 215

Query: 236 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPI 294
           A    + +  V+ E+    G D   E  G  S      ++   G G+  +LG+      I
Sbjct: 216 A---KEDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPPGDMAI 271

Query: 295 SLNSIEILKGRSVCGTYFGGLKPRSDIATLAQ--KYLDKELNLGEFITHEVSFHDINKAF 352
             N + I KG ++ G Y G    R    T  +    L   L+L   ITH     D  K F
Sbjct: 272 DWNKV-IFKGLTIKGIY-G----REMFETWYKMSALLQSGLDLSPIITHRFPIDDFQKGF 325

Query: 353 DLLLEGKS 360
           + +  G+S
Sbjct: 326 EAMRSGQS 333

Length = 341

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score =  121 bits (306), Expect = 1e-31
 Identities = 98/367 (26%), Positives = 154/367 (41%), Gaps = 56/367 (15%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKS--STDLPKLPLPVIFGHEAVG 62
            GKPL +E++ V  P   ++ +++    +CHSD+          LP   LP   GHE  G
Sbjct: 9   YGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPY-KLPFTLGHENAG 67

Query: 63  VVESVGEYVEEVKERDLVL---PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTS 119
            VE VG  V+ +KE D V+   P     CG CR C+  + N C        P +  DG  
Sbjct: 68  WVEEVGSGVDGLKEGDPVVVHPPWG---CGTCRYCRRGEENYCE---NARFPGIGTDG-- 119

Query: 120 RFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVA 179
                             F EY +V    +VK+   +    A  L+    T   A  K  
Sbjct: 120 -----------------GFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKKAL 162

Query: 180 GV-EVGSTVAIFGLGAVG-LAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPAT 237
              + GSTV + G+G +G +AV +  R    + +I VD + E  ++ ++ G    +N   
Sbjct: 163 PYLDPGSTVVVIGVGGLGHIAV-QILRALTPATVIAVDRSEEALKLAERLGADHVLN--- 218

Query: 238 CGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGS-PIS 295
                V + ++E+T G GAD   + +G    +  A     +G G+ VI+G   HG  P S
Sbjct: 219 -ASDDVVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGGHGRLPTS 276

Query: 296 LNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFH---DINKAF 352
                +    SV G+ +G      ++  LA+            +  E++     D N+A 
Sbjct: 277 DL---VPTEISVIGSLWGTRAELVEVVALAESGK---------VKVEITKFPLEDANEAL 324

Query: 353 DLLLEGK 359
           D L EG+
Sbjct: 325 DRLREGR 331

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like

 Score =  120 bits (302), Expect = 5e-31
 Identities = 101/335 (30%), Positives = 144/335 (42%), Gaps = 43/335 (12%)

Query: 26  IKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH 85
           +K+L T++C +D+   K   D+P +    I GHE VGVVE VG  V   K  D VL    
Sbjct: 30  VKMLKTTICGTDLHILKG--DVPTVTPGRILGHEGVGVVEEVGSAVTNFKVGDRVLISCI 87

Query: 86  RDCGECRDCKSSKSNTCSKFG--RGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSV 143
             CG C  C+    + C   G   G       DGT                     EY  
Sbjct: 88  SSCGTCGYCRKGLYSHCESGGWILGNLI----DGTQ-------------------AEY-- 122

Query: 144 VDITH----VVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAV 199
           V I H    + K+   +    A +LS  + TG         V+ G TVAI G G VGLA 
Sbjct: 123 VRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAA 182

Query: 200 AEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYC 258
              A+L   SKII VD++  + E+ KK G T  +N A        + + E+TDG G D  
Sbjct: 183 LLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSA---KGDAIEQVLELTDGRGVDVV 239

Query: 259 FECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPR 318
            E +G+ +           G G    +GV  HG P+ L+ +E L  +++  T   GL   
Sbjct: 240 IEAVGIPATFELCQELVAPG-GHIANVGV--HGKPVDLH-LEKLWIKNITITT--GLVDT 293

Query: 319 SDIATLAQKYLDKELNLGEFITHEVSFHDINKAFD 353
           +    L +     +L+  + +TH     +I KA+D
Sbjct: 294 NTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYD 328

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score =  117 bits (295), Expect = 4e-30
 Identities = 98/359 (27%), Positives = 155/359 (43%), Gaps = 55/359 (15%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
             +   IEE+    P   E+ IK+    LC+ D+   +     P++  PVI GHE VG V
Sbjct: 9   FKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGF--YPRMKYPVILGHEVVGTV 66

Query: 65  ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFREL 124
           E VGE V+  K  D V  + +   G C  C+S +   C                 + R  
Sbjct: 67  EEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYC-----------------KNRLG 109

Query: 125 KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVG 184
            G+ +  F     F EY+ V +T +VK+ P++    A ++ C          + AGV+ G
Sbjct: 110 YGEELDGF-----FAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGL-RRAGVKKG 163

Query: 185 STVAIFGLG------AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATC 238
            TV + G G      A+ +A A GA      K+I V  +  K +I  K+   D++     
Sbjct: 164 ETVLVTGAGGGVGIHAIQVAKALGA------KVIAVTSSESKAKIVSKYA--DYV----I 211

Query: 239 GDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG-VEMHGS-PISL 296
                S+ +K++  GGAD   E +G T  + ++  S   G GK + +G V+   +  + L
Sbjct: 212 VGSKFSEEVKKI--GGADIVIETVG-TPTLEESLRSLNMG-GKIIQIGNVDPSPTYSLRL 267

Query: 297 NSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLL 355
             I ILK   + G        + D+    +  L  E  +   I  EVS  +I+KA + L
Sbjct: 268 GYI-ILKDIEIIGHISAT---KRDVEEALK--LVAEGKIKPVIGAEVSLSEIDKALEEL 320

Length = 334

>gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

 Score =  115 bits (291), Expect = 4e-29
 Identities = 101/369 (27%), Positives = 156/369 (42%), Gaps = 67/369 (18%)

Query: 26  IKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH 85
           +++  T++C SD+  +     +P +    I GHE +GVVE VG  V  +K  D V+  F 
Sbjct: 30  VRVTATAICGSDLHLY--HGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVGDRVVVPFT 87

Query: 86  RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHH---FLNISSFT--- 139
             CGEC  CK    + C             D T+   E+     H        S  T   
Sbjct: 88  IACGECFYCKRGLYSQC-------------DNTNPSAEMAKLYGHAGAGIFGYSHLTGGY 134

Query: 140 -----EYSVV---DITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFG 191
                EY  V   D+    KI   +    A  LS  + TG  AA ++A V+ G TVA++G
Sbjct: 135 AGGQAEYVRVPFADVGPF-KIPDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWG 192

Query: 192 LGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMT 251
            G VGL  A  A+L  A ++I +D  PE+ E+ +     + IN        V + ++E+T
Sbjct: 193 CGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETINFEEV--DDVVEALRELT 250

Query: 252 DG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLN-SIEILK--GR-S 306
            G G D C + +G+ +  +    + +        L  +    P +L  +I+ ++  G  S
Sbjct: 251 GGRGPDVCIDAVGMEAHGSPLHKAEQALLK----LETD---RPDALREAIQAVRKGGTVS 303

Query: 307 VCGTYFG-------------GLKPRSDIATLAQKYLDKELNL---GEF-----ITHEVSF 345
           + G Y G             GL  R    T  Q+YL + L L   GE      ITH +  
Sbjct: 304 IIGVYGGTVNKFPIGAAMNKGLTLRMG-QTHVQRYLPRLLELIESGELDPSFIITHRLPL 362

Query: 346 HDINKAFDL 354
            D  +A+ +
Sbjct: 363 EDAPEAYKI 371

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386

>gnl|CDD|176247 cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like

 Score =  107 bits (270), Expect = 2e-26
 Identities = 96/335 (28%), Positives = 146/335 (43%), Gaps = 42/335 (12%)

Query: 26  IKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH 85
           I+++ T +C SD+  ++  +   + P P+  GHE VGVVE VG  V  VK  D V+  F 
Sbjct: 30  IRVVATCVCGSDLWPYRGVSP-TRAPAPI--GHEFVGVVEEVGSEVTSVKPGDFVIAPFA 86

Query: 86  RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVD 145
              G C  C++  + +C   G         DG                    +    + D
Sbjct: 87  ISDGTCPFCRAGFTTSCVHGGFWGAFV---DGGQ----------------GEYVRVPLAD 127

Query: 146 ITHVVKITPHIPLGIACL------LSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAV 199
            T +VK  P  P     L      LS  + TG  AA   AGV  GSTV + G GAVGL  
Sbjct: 128 GT-LVK-VPGSPSDDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCA 184

Query: 200 AEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYC 258
              A+   A +II +  + ++  + ++FG TD +  A  G++ V++V +E+T G GAD  
Sbjct: 185 VLAAKRLGAERIIAMSRHEDRQALAREFGATDIV--AERGEEAVARV-RELTGGVGADAV 241

Query: 259 FECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKP- 317
            EC+G    M  A   +R G G+   +GV   G  + +     L  R+V     GG  P 
Sbjct: 242 LECVGTQESMEQAIAIARPG-GRVGYVGVPHGGVELDVRE---LFFRNV--GLAGGPAPV 295

Query: 318 RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAF 352
           R  +  L    L   +N G      +   ++ + +
Sbjct: 296 RRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGY 330

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score =  106 bits (266), Expect = 3e-26
 Identities = 78/285 (27%), Positives = 127/285 (44%), Gaps = 43/285 (15%)

Query: 11  IEEIEVEPPKAW--EIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG 68
           +E  EV  P+    E+ IK+    +C SD+  +K   D  + P  V+ GHE  G +  VG
Sbjct: 14  VELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETP--VVLGHEFSGTIVEVG 71

Query: 69  EYVEEVKERDLVLPI-FHRDCGECRDCKSSKSNTC-SKFGRGYRPNMPRDGTSRFRELKG 126
             VE  K  D V+       CG C  C+    N C  + G G +     DG         
Sbjct: 72  PDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQ----ADG--------- 118

Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LSCGVSTGVGAAWKVAGVEV 183
                      F EY +V    + ++  ++ L  A L   L+  V     A  + +G+  
Sbjct: 119 ----------GFAEYVLVPEESLHELPENLSLEAAALTEPLAVAVH----AVAERSGIRP 164

Query: 184 GSTVAIFGLGAVGLAVAEGARLNRASKII-GVDINPEKFEIGKKFGITDFINPATCGDKT 242
           G TV +FG G +GL  A+ A+L  A+ ++ G + +  + ++ K+ G          G++ 
Sbjct: 165 GDTVVVFGPGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGADA----VNGGEED 220

Query: 243 VSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILG 286
           +++++ E+TDG GAD   EC G    +  A    R+G G+ V +G
Sbjct: 221 LAELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVG 264

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score =  105 bits (264), Expect = 1e-25
 Identities = 87/352 (24%), Positives = 139/352 (39%), Gaps = 41/352 (11%)

Query: 9   LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFW-KSSTDLPKLPLPVIFGHEAVGVVESV 67
           L +EE     P   E+R+++    +C SD+ ++        +L  P++ GHE  GVVE+V
Sbjct: 9   LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAV 68

Query: 68  GEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGT-SRFRELKG 126
           G  V  +     V     R CG C  C++ + N C         NM   G+  RF  ++G
Sbjct: 69  GPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLC--------LNMRFLGSAMRFPHVQG 120

Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LSCGVSTGVGAAWKVAGVEV 183
                      F EY VVD +  V +   + L  A L   L+  +      A   AG   
Sbjct: 121 ----------GFREYLVVDASQCVPLPDGLSLRRAALAEPLAVALH-----AVNRAGDLA 165

Query: 184 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTV 243
           G  V + G G +G  V   AR   A++I+  D+      + +  G  + +N A       
Sbjct: 166 GKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDPLAAY 225

Query: 244 SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK 303
           +        G  D  FE  G  + +  A    R G G  V +G  M G P+ L    ++ 
Sbjct: 226 AADK-----GDFDVVFEASGAPAALASALRVVRPG-GTVVQVG--MLGGPVPLPLNALV- 276

Query: 304 GRSVCGTYFGGLKPRSDIATLAQKYL-DKELNLGEFITHEVSFHDINKAFDL 354
            + +     G  +   + A  A + L    +++   IT      +  +AF L
Sbjct: 277 AKELD--LRGSFRFDDEFAE-AVRLLAAGRIDVRPLITAVFPLEEAAEAFAL 325

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score =  101 bits (255), Expect = 2e-24
 Identities = 94/348 (27%), Positives = 146/348 (41%), Gaps = 43/348 (12%)

Query: 26  IKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH 85
           +K+   ++C SD+  ++            + GHE VG V  VG  V  +K  D V+  F 
Sbjct: 30  VKVTAAAICGSDLHIYRGH---IPSTPGFVLGHEFVGEVVEVGPEVRTLKVGDRVVSPFT 86

Query: 86  RDCGECRDCKSSKSNTCSK---FGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYS 142
             CGEC  C+  +S  C+K   FG    PN+  DG                   +  EY 
Sbjct: 87  IACGECFYCRRGQSGRCAKGGLFGYAGSPNL--DG-------------------AQAEYV 125

Query: 143 VV---DITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAV 199
            V   D T ++K+   +    A LL   + TG   A K A V  G TVA+ G G VGL  
Sbjct: 126 RVPFADGT-LLKLPDGLSDEAALLLGDILPTGYFGA-KRAQVRPGDTVAVIGCGPVGLCA 183

Query: 200 AEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYC 258
              A++  A+++  VD  PE+ E     G  + IN     D    + ++E T+G GAD  
Sbjct: 184 VLSAQVLGAARVFAVDPVPERLERAAALG-AEPINFE---DAEPVERVREATEGRGADVV 239

Query: 259 FECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTY-FGGLKP 317
            E +G  + ++ AF+  R   G    +GV           ++    +++  T  FG    
Sbjct: 240 LEAVGGAAALDLAFDLVRP-GGVISSVGVH-TAEEFPFPGLDAY-NKNL--TLRFGRCPV 294

Query: 318 RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
           RS    L        L+L   I H +   +  +A+ L  + K L+ ++
Sbjct: 295 RSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKVLKVVL 342

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 98.4 bits (246), Expect = 3e-23
 Identities = 63/207 (30%), Positives = 86/207 (41%), Gaps = 39/207 (18%)

Query: 8   PLVIEEIEVEPPKAWEIRIKILCTSLCHSD--VTFWKSSTDLPKLPLPVIFGHEAVGVVE 65
           PL + E+ V  P   E+ IK+    +C +D  +       DLP   LP+I GHE VG VE
Sbjct: 16  PLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIV----EGDLPPPKLPLIPGHEIVGRVE 71

Query: 66  SVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSKFG-RGYRPNMPRDGTSRFRE 123
           +VG  V      D V +P     CGECR C+S + N C      GY      DG      
Sbjct: 72  AVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYT----VDG------ 121

Query: 124 LKGDVIHHFLNISSFTEYSVVDITHVVKITP-HIPLGIACLLSCGVSTGVGAAWKVAGVE 182
                         + EY V D      I   +     A LL  G+  G   A K+AG++
Sbjct: 122 -------------GYAEYMVADERFAYPIPEDYDDEEAAPLLCAGI-IGYR-ALKLAGLK 166

Query: 183 VGSTVAIFGLGAVG-----LAVAEGAR 204
            G  + ++G GA       +A  +GA 
Sbjct: 167 PGQRLGLYGFGASAHLALQIARYQGAE 193

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score = 99.5 bits (248), Expect = 3e-23
 Identities = 91/362 (25%), Positives = 141/362 (38%), Gaps = 44/362 (12%)

Query: 9   LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTD----LPKLP-LPVIFGHEAVGV 63
           L +E++ V   K  EI I++    +C SD+  +++  D     P L   PV+ GHE  GV
Sbjct: 39  LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGV 98

Query: 64  VESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGR-GYRPNMPRDGTSRFR 122
           VE  G+ V+  ++ D V       CG CR C+S   N C      G+      DG     
Sbjct: 99  VEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGFS----ADG----- 149

Query: 123 ELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLG------IACLLSCGVSTGVGAAW 176
                         +F EY  V+  +  +I     +        A  L    S      +
Sbjct: 150 --------------AFAEYIAVNARYAWEINELREIYSEDKAFEAGALVEPTSVAYNGLF 195

Query: 177 KVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 235
              G    G+ V ++G G +GLA    A+   ASK+I  +I+ E+  + K+ G     NP
Sbjct: 196 IRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNP 255

Query: 236 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPI 294
               D    + + E+T G GAD   E  G           S    GK V +G      P+
Sbjct: 256 TKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPL 315

Query: 295 SLNSIEILKGRSVC--GTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAF 352
            L  +++ + + V   G    G+ P   I  +A   +D    + + IT       I +A 
Sbjct: 316 HLEVLQVRRAQIVGAQGHSGHGIFPSV-IKLMASGKID----MTKIITARFPLEGIMEAI 370

Query: 353 DL 354
             
Sbjct: 371 KA 372

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score = 95.8 bits (239), Expect = 1e-22
 Identities = 58/229 (25%), Positives = 90/229 (39%), Gaps = 22/229 (9%)

Query: 140 EYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAV 199
           E  VV    +V +   +P   A L +   +T +      A   +G  VA+ GLG VGL  
Sbjct: 56  ERVVVPANLLVPLPDGLPPERAALTALA-ATALNGVRD-AEPRLGERVAVVGLGLVGLLA 113

Query: 200 AEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCF 259
           A+ A+   A +++GVD +  + E+ +  G  D +   T           E+   GAD   
Sbjct: 114 AQLAKAAGAREVVGVDPDAARRELAEALGPADPVAADT---------ADEIGGRGADVVI 164

Query: 260 ECIGLTSVMNDAFNSSREGWGKTVILG-----VEMHGSPISLNSIEILKGRSVCGTYFGG 314
           E  G  S +  A    R+  G+ V++G       + G       + I   +         
Sbjct: 165 EASGSPSALETALRLLRDR-GRVVLVGWYGLKPLLLGEEFHFKRLPIRSSQV--YGIGRY 221

Query: 315 LKPRSDIAT-LAQKYLD--KELNLGEFITHEVSFHDINKAFDLLLEGKS 360
            +PR        ++ LD   E  L   ITH V F D  +A+ LL E   
Sbjct: 222 DRPRRWTEARNLEEALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDPP 270

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score = 96.3 bits (240), Expect = 2e-22
 Identities = 71/361 (19%), Positives = 128/361 (35%), Gaps = 67/361 (18%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTD-LPKLPLPVIFGHEAVGV 63
           PG+   +EE     P   ++ +++    +C SD+  +            P   GHE  G 
Sbjct: 4   PGR-FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGR 62

Query: 64  VESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRE 123
           V ++G  V  +   D V                                           
Sbjct: 63  VVALGPGVRGLAVGDRVA------------------------------------------ 80

Query: 124 LKGDVIHHFLNISSFTEYSVVDITHVVKITPHIP--LGIACLLSCGVSTGVGAAWKVAGV 181
                    L+  +F EY + D  H V +   +         L C ++      ++   +
Sbjct: 81  --------GLSGGAFAEYDLADADHAVPLPSLLDGQAFPGEPLGCALN-----VFRRGWI 127

Query: 182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 241
             G TVA+ G G +GL   + A    A ++I +D  P +  + ++ G T+ +   +   +
Sbjct: 128 RAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDS---E 184

Query: 242 TVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG-SPISLNSI 299
            + + ++E+T G GAD   E +G    ++ A     E  G+ VI G    G  P+   + 
Sbjct: 185 AIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQDGPRPVPFQTW 243

Query: 300 EILKGRSVCGTYFGGLKPRSDIATLAQKYL-DKELNLGEFITHEVSFHDINKAFDLLLEG 358
              KG  +        +   +    A K + D  L+LG  +THE    ++  AF+     
Sbjct: 244 N-WKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRR 302

Query: 359 K 359
            
Sbjct: 303 P 303

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 95.3 bits (238), Expect = 4e-22
 Identities = 90/364 (24%), Positives = 140/364 (38%), Gaps = 51/364 (14%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
               L     E  P    ++ IKI    +CHSD+   ++  +      P++ GHE VG+V
Sbjct: 8   ASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRN--EWGPTKYPLVPGHEIVGIV 65

Query: 65  ESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRE 123
            +VG  V + K  D V +      CG C  CKS +   C K    Y      DGT     
Sbjct: 66  VAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYN-GKYPDGT----- 119

Query: 124 LKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEV 183
                    +    + ++ VVD   V KI   +    A  L C   T V +  K  GV  
Sbjct: 120 ---------ITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGIT-VYSPLKRNGVGP 169

Query: 184 GSTVAIFGLG-----AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATC 238
           G  V + G+G     AV  A A GA       +     +P K E   K G  +FI  AT 
Sbjct: 170 GKRVGVVGIGGLGHLAVKFAKALGAE------VTAFSRSPSKKEDALKLGADEFI--ATK 221

Query: 239 GDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNS 298
             + + +    +     D   + +  +  ++   +  + G G  V++G      P+ +  
Sbjct: 222 DPEAMKKAAGSL-----DLIIDTVSASHDLDPYLSLLKPG-GTLVLVGA--PEEPLPVPP 273

Query: 299 IE-ILKGRSVCGTYFGGLKPRSDIATLAQKYLD--KELNLGEFITHEVSFHDINKAFDLL 355
              I   +SV G+  GG   R +     Q+ LD   E  + +     +    IN+A + L
Sbjct: 274 FPLIFGRKSVAGSLIGG---RKET----QEMLDFAAEHGI-KPWVEVIPMDGINEALERL 325

Query: 356 LEGK 359
            +G 
Sbjct: 326 EKGD 329

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score = 90.1 bits (224), Expect = 4e-22
 Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 6/135 (4%)

Query: 194 AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG 253
            VGLA  + A+   A+++I VD + EK E+ K+ G    IN          + ++E+T G
Sbjct: 1   GVGLAAVQLAKALGAARVIAVDRSEEKLELAKELGADHVINYRDED---FVERVRELTGG 57

Query: 254 -GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYF 312
            G D   +C+G  + +  A    R G    V+        P  L  + +LK  ++ G+  
Sbjct: 58  RGVDVVIDCVGAPATLEQALELLRPGGRVVVVGLPGGAPVPFPLRDL-LLKELTILGSLG 116

Query: 313 GGLK-PRSDIATLAQ 326
           GG +     +  LA 
Sbjct: 117 GGREEFEEALELLAS 131

Length = 131

>gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 94.2 bits (235), Expect = 1e-21
 Identities = 83/316 (26%), Positives = 141/316 (44%), Gaps = 46/316 (14%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
           PG PL + E +V  P   E+ IK+    +CHSD    + +  +P L  P + GHE VG +
Sbjct: 9   PGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGA--MPGLSYPRVPGHEVVGRI 66

Query: 65  ESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRE 123
           ++VGE V   K  D V +      CG C  C+      C     G    + RDG      
Sbjct: 67  DAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCE---NGKVTGVTRDG------ 117

Query: 124 LKGDVIHHFLNISSFTEYSVVDITHVVKITPHI-PLGIACLLSCGVSTGVGAAWKVAGVE 182
                         + EY +     + +I   +     A LL  GV+T    A + +G +
Sbjct: 118 -------------GYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTT--FNALRNSGAK 162

Query: 183 VGSTVAIFGLGAVG-LAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 241
            G  VA+ G+G +G LAV   A++    + + +    +K ++ +K G   +I+ +    +
Sbjct: 163 PGDLVAVQGIGGLGHLAVQYAAKM--GFRTVAISRGSDKADLARKLGAHHYIDTSK---E 217

Query: 242 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGW---GKTVILGVEMHGSPISLNS 298
            V++ ++E+  GGA      I  T+    A ++   G    GK +ILG    G P++++ 
Sbjct: 218 DVAEALQEL--GGAK----LILATAPNAKAISALVGGLAPRGKLLILGAA--GEPVAVSP 269

Query: 299 IE-ILKGRSVCGTYFG 313
           ++ I+  +S+ G   G
Sbjct: 270 LQLIMGRKSIHGWPSG 285

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score = 86.9 bits (216), Expect = 4e-21
 Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 24/130 (18%)

Query: 23  EIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP 82
           E+ +++    +C SD+  ++   + P + LP+I GHE  G+VE VG  V  +K  D V+ 
Sbjct: 3   EVLVRVKAAGICGSDLHIYRG--EPPPVKLPLILGHEGAGIVEEVGPGVTGLKVGDRVVV 60

Query: 83  IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYS 142
                CG+C  C+  + N C     G    +  DG                    F EY 
Sbjct: 61  YPLIPCGKCAACREGRENLC---PNGKFLGVHLDGG-------------------FAEYV 98

Query: 143 VVDITHVVKI 152
           VV   ++V +
Sbjct: 99  VVPARNLVPL 108

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

 Score = 88.2 bits (219), Expect = 1e-19
 Identities = 100/361 (27%), Positives = 152/361 (42%), Gaps = 58/361 (16%)

Query: 10  VIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGE 69
           V+ E  + P K  E  +K+    +CH+D+    ++ D        I GHE +G+V+ VG 
Sbjct: 14  VVVEKTLRPLKHGEALVKMEYCGVCHTDLHV--ANGDFGDKT-GRILGHEGIGIVKEVGP 70

Query: 70  YVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSKF-GRGYRPNMPRDGTSRFRELKGD 127
            V  +K  D V +  F   CG C  C + +   C      GY      DG          
Sbjct: 71  GVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTV----DG---------- 116

Query: 128 VIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC-GVSTGVGAAWKVAGVEVGST 186
                       E  +V   + VK+   +    A  ++C GV+T    A KV+G++ G  
Sbjct: 117 ---------GMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTY--KAIKVSGIKPGQW 165

Query: 187 VAIFGLGAVG-LAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQ 245
           +AI+G G +G LA+     +  A K+I VDIN +K  + K+ G    IN     D  V++
Sbjct: 166 IAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSKRVED--VAK 222

Query: 246 VIKEMTDGGADYCFECIGLTSVMNDAFNSS----REGWGKTVILG--VEMHGSPISLNSI 299
           +I+E T GGA        +T+V   AFN +    R G G+ V +G   E     + L+  
Sbjct: 223 IIQEKT-GGAHAAV----VTAVAKAAFNQAVDAVRAG-GRVVAVGLPPES----MDLSIP 272

Query: 300 E-ILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEG 358
             +L G  V G+  G    R D   L + +                  DIN  FD + +G
Sbjct: 273 RLVLDGIEVVGSLVG---TRQD---LEEAFQFGAEGKVVPKVQLRPLEDINDIFDEMEQG 326

Query: 359 K 359
           K
Sbjct: 327 K 327

Length = 338

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score = 88.1 bits (219), Expect = 2e-19
 Identities = 70/285 (24%), Positives = 113/285 (39%), Gaps = 41/285 (14%)

Query: 9   LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG 68
           L   ++    P   E+ +++   +L H D+ + +      KLPLP I G +  GVVE+VG
Sbjct: 15  LEYGDLPEPEPGPDEVLVRVKAAALNHLDL-WVRRGMPGIKLPLPHILGSDGAGVVEAVG 73

Query: 69  EYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFG-RGYRPNMPRDGTSRFRELKGD 127
             V  VK    V+      CG C  C + + N C+++G  G       DG          
Sbjct: 74  PGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEH----VDGG--------- 120

Query: 128 VIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKV----AGVEV 183
                     + EY  V   +++ I  ++    A        T    AW +    A +  
Sbjct: 121 ----------YAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLT----AWHMLVTRARLRP 166

Query: 184 GSTVAIFGLGA-VGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT 242
           G TV + G G+ VG A  + A+L  A  +I    + +K E  K+ G    I+      + 
Sbjct: 167 GETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVIDYRK---ED 222

Query: 243 VSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILG 286
             + ++E+T   G D   E +G       +  S   G G+ V  G
Sbjct: 223 FVREVRELTGKRGVDVVVEHVGAA-TWEKSLKSLARG-GRLVTCG 265

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score = 87.0 bits (216), Expect = 3e-19
 Identities = 84/363 (23%), Positives = 131/363 (36%), Gaps = 63/363 (17%)

Query: 5   PGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVG 62
            G P  L + E+    P   E+ +++    +   DV   +     P  PLP I G EA G
Sbjct: 9   FGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLA-PPVRPLPFIPGSEAAG 67

Query: 63  VVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFR 122
           VV +VG  V   K  D V                                + RDG     
Sbjct: 68  VVVAVGSGVTGFKVGDRVA---------------------------ALGGVGRDG----- 95

Query: 123 ELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVE 182
                          + EY VV    +V +   +    A  L     T   A +  AG++
Sbjct: 96  --------------GYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLK 141

Query: 183 VGSTVAIFG-LGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 241
            G TV + G  G VG A  + A+   A+ +  V  + EK E+ K+ G    IN     ++
Sbjct: 142 PGETVLVHGAAGGVGSAAIQLAKALGATVVAVVS-SSEKLELLKELGADHVINYR---EE 197

Query: 242 TVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE 300
              + ++E+T G G D   + +G       +  +   G G+ V +G    G P+ LN + 
Sbjct: 198 DFVEQVRELTGGKGVDVVLDTVG-GDTFAASLAALAPG-GRLVSIGALSGGPPVPLNLLP 255

Query: 301 -ILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEF---ITHEVSFHDINKAFDLLL 356
            + K  ++ G   G   P +    LA+  L   L  G+    I       +   A   LL
Sbjct: 256 LLGKRLTLRGVTLGSRDPEALAEALAE--LFDLLASGKLKPVIDRVYPLAEAPAAAAHLL 313

Query: 357 EGK 359
             +
Sbjct: 314 LER 316

Length = 326

>gnl|CDD|176218 cd08256, Zn_ADH2, Alcohol dehydrogenases of the MDR family

 Score = 87.1 bits (216), Expect = 4e-19
 Identities = 78/280 (27%), Positives = 115/280 (41%), Gaps = 42/280 (15%)

Query: 11  IEEIEVEPPKAWEIRIKILCTSLCHSDV-------TFWKSSTDLPKLPLPVIFGHEAVGV 63
           +EE+ V  P   EI +K+    +C  D+       +FW      P +  P+I GHE VG 
Sbjct: 14  LEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGR 73

Query: 64  VESVGEYVEE--VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFG-RGYRPNMPRDGTSR 120
           V  +GE  EE  VK  D V+      C  CR C   +   C K    G++ N+   G + 
Sbjct: 74  VVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVN-GGMAE 132

Query: 121 FRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LSCGVSTGVGAAWK 177
           +     + I H                   K+   IP   A L   L+C +      A  
Sbjct: 133 YMRFPKEAIVH-------------------KVPDDIPPEDAILIEPLACALH-----AVD 168

Query: 178 VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPAT 237
            A ++    V + G G +GL +   ARL    K+I +D+  E+  + +KFG    +NP  
Sbjct: 169 RANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPP- 227

Query: 238 CGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSR 276
             +  V + IKE+T G G D   E  G  S +    N  R
Sbjct: 228 --EVDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIR 265

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 350

>gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

 Score = 85.0 bits (210), Expect = 2e-18
 Identities = 91/371 (24%), Positives = 154/371 (41%), Gaps = 33/371 (8%)

Query: 1   MQRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEA 60
           M   PGKP+V   +E+    A ++ +K+    +CH+D++++           P+  GHE 
Sbjct: 3   MMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHAL-PLALGHEI 61

Query: 61  VGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSR 120
            G V   G        + +++P     CGEC  CK+ +   C          MP +    
Sbjct: 62  SGRVIQAGAGAASWIGKAVIVPAV-IPCGECELCKTGRGTICRA------QKMPGN---- 110

Query: 121 FRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAG 180
             +++G    H +  +      VVD   +      +PL    +++  V+T   AA + AG
Sbjct: 111 --DMQGGFASHIVVPAKG--LCVVDEARLAA--AGLPLEHVSVVADAVTTPYQAAVQ-AG 163

Query: 181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 240
           ++ G  V + G G VG  + + A+   A+ ++ +DI+PEK E+ K FG    +NP     
Sbjct: 164 LKKGDLVIVIGAGGVGGYMVQTAKAMGAA-VVAIDIDPEKLEMMKGFGADLTLNPKDKSA 222

Query: 241 KTVSQVIKEMTDGGAD-----YCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS 295
           + V ++IK               FEC G       A +    G G  V++G  M  +   
Sbjct: 223 REVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG-GTLVVVGYTMAKTEYR 281

Query: 296 LNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFI-THEVSFHDINKAFDL 354
           L+++     R++ G +  G  P    A L    LD ++ LG F+    +    I   F  
Sbjct: 282 LSNLMAFHARAL-GNW--GCPPDRYPAAL-DLVLDGKIQLGPFVERRPLD--QIEHVFAA 335

Query: 355 LLEGKSLRCII 365
               K  R  I
Sbjct: 336 AHHHKLKRRAI 346

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score = 83.0 bits (206), Expect = 8e-18
 Identities = 87/377 (23%), Positives = 127/377 (33%), Gaps = 81/377 (21%)

Query: 6   GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVE 65
           G  LV+ ++ V  P   E+ +K+   +L   D   WK          P I G +  G V 
Sbjct: 11  GGLLVVVDVPVPKPGPDEVLVKVKAVALNPVD---WKHQDYGFIPSYPAILGCDFAGTVV 67

Query: 66  SVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELK 125
            VG  V   K  D V        G               F  G  PN PR+G        
Sbjct: 68  EVGSGVTRFKVGDRV-------AG---------------FVHGGNPNDPRNG-------- 97

Query: 126 GDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVST---------GVGAAW 176
                      +F EY V D     KI  +I    A  L  G+ T         G+    
Sbjct: 98  -----------AFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPP 146

Query: 177 -KVAGVEVGSTVAIFGLG--AVG-----LAVAEGARLNRASKIIGVDINPEKFEIGKKFG 228
            K +    G  V I+G G  +VG     LA   G +      +I    +P+ F++ K  G
Sbjct: 147 PKPSPASKGKPVLIWG-GSSSVGTLAIQLAKLAGYK------VITT-ASPKNFDLVKSLG 198

Query: 229 ITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 288
                +     D  V + I+  T G   Y  +CI           +     G  +   V 
Sbjct: 199 ADAVFDYH---DPDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKL---VS 252

Query: 289 MHGSPISLNSIEILKGRSV-CGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEV---- 343
           +   P      + +K + V   T FG +    +   +  KYL + L  G+   H V    
Sbjct: 253 LLPVPEETEPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHPVRVVE 312

Query: 344 -SFHDINKAFDLLLEGK 359
                + +  DLL +GK
Sbjct: 313 GGLEGVQEGLDLLRKGK 329

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family

 Score = 82.7 bits (205), Expect = 1e-17
 Identities = 72/366 (19%), Positives = 127/366 (34%), Gaps = 60/366 (16%)

Query: 6   GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWK---------SSTDLPKLPLPVIF 56
             PLV+ ++    P   ++ +K+L   +C SD+                 L  L   ++ 
Sbjct: 8   DGPLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVL 67

Query: 57  GHEAVGVVESVGEYVEE---VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNM 113
           GHE  G V   G   E    V  R   LP+    CG+   C           G G  P  
Sbjct: 68  GHEFCGEVVDYGPGTERKLKVGTRVTSLPLLL--CGQGASC-----------GIGLSPEA 114

Query: 114 PRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LSCGVST 170
           P                       + EY ++    ++++   + +  A L   L+ G+  
Sbjct: 115 P---------------------GGYAEYMLLSEALLLRVPDGLSMEDAALTEPLAVGLH- 152

Query: 171 GVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 230
               A + A +  G    + G G +GLAV    +      I+  D +PE+  +    G  
Sbjct: 153 ----AVRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGAD 208

Query: 231 DFINPATCGDKTVSQVIKEMTDGGA-DYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM 289
             ++PA                G      FEC+G   ++      +  G G+ V++GV M
Sbjct: 209 IVVDPAADSPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGVCM 267

Query: 290 HGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDIN 349
               I   ++ I K  ++    F       + A       + ++++   +T  V    + 
Sbjct: 268 ESDNI-EPALAIRKELTL---QFSLGYTPEEFADALDALAEGKVDVAPMVTGTVGLDGVP 323

Query: 350 KAFDLL 355
            AF+ L
Sbjct: 324 DAFEAL 329

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional

 Score = 73.6 bits (181), Expect = 2e-14
 Identities = 83/355 (23%), Positives = 135/355 (38%), Gaps = 53/355 (14%)

Query: 9   LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG 68
           L IEE  +  P A E+R+K+    +C SD   ++     P    P + GHE  GV+++VG
Sbjct: 12  LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHN--PFAKYPRVIGHEFFGVIDAVG 69

Query: 69  EYVEE--VKERDLVLPIFHRDCGECRDCKSSKSNTCSKF---GRGYRPNMPRDGTSRFRE 123
           E V+   + ER  V P+    CG C  C   K N C+     G      + RDG      
Sbjct: 70  EGVDAARIGERVAVDPVI--SCGHCYPCSIGKPNVCTSLVVLG------VHRDG------ 115

Query: 124 LKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLS-CGVSTGVGAAWKVAGVE 182
                         F+EY+VV   +  +I   I    A ++    ++  V       G  
Sbjct: 116 -------------GFSEYAVVPAKNAHRIPDAIADQYAVMVEPFTIAANVTGR---TGPT 159

Query: 183 VGSTVAIFGLGAVGLAVAEG-ARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 241
                 I+G G VGL + +    +     +I  D   E+  + K+ G    IN A     
Sbjct: 160 EQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ---- 215

Query: 242 TVSQVIKEMTDGGAD--YCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI 299
               + + + + G       +     S++ +A   +     + V++G     S I    I
Sbjct: 216 --EPLGEALEEKGIKPTLIIDAACHPSILEEAVTLASPA-ARIVLMGFSSEPSEIVQQGI 272

Query: 300 EILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDL 354
              K  S+  +     K    I  L++  +D E    + ITH   F  +  A +L
Sbjct: 273 -TGKELSIFSSRLNANKFPVVIDWLSKGLIDPE----KLITHTFDFQHVADAIEL 322

Length = 339

>gnl|CDD|132409 TIGR03366, HpnZ_proposed, putative phosphonate catabolism associated alcohol dehydrogenase

 Score = 72.5 bits (178), Expect = 2e-14
 Identities = 61/253 (24%), Positives = 96/253 (37%), Gaps = 34/253 (13%)

Query: 55  IFGHEAVGVVESVGEYVEEVKERDLV-LPIFHR-------DCGECRDCKSSKSNTC-SKF 105
           + GHE VG V ++          D V L +  R        CG C  C+      C S  
Sbjct: 1   VLGHEIVGEVVALRG--GFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLR 58

Query: 106 GRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLS 165
             G+   +          L G    H    +          T +V +   +P  +A    
Sbjct: 59  KYGHEA-LDSGW-----PLSGGYAEHCHLPAG---------TAIVPVPDDLPDAVAAPAG 103

Query: 166 CGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK 225
           C  +T V AA + AG   G  V + G G +GL  A  A    A++++  D +P++ E+  
Sbjct: 104 CATAT-VMAALEAAGDLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRRELAL 162

Query: 226 KFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVI 284
            FG T    P       +++    + +G G D   E  G T+ +     S   G G  V+
Sbjct: 163 SFGATALAEPE-----VLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVL 216

Query: 285 LGVEMHGSPISLN 297
            G    G P++L+
Sbjct: 217 AGSVFPGGPVALD 229

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. Length = 280

>gnl|CDD|234025 TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenase, glutathione-independent

 Score = 72.6 bits (178), Expect = 4e-14
 Identities = 72/255 (28%), Positives = 105/255 (41%), Gaps = 46/255 (18%)

Query: 26  IKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH 85
           +K++ T++C SD    +  T  P     ++ GHE  G V   G  VE +K  D+V   F+
Sbjct: 38  LKVVTTNICGSDQHMVRGRTTAPT---GLVLGHEITGEVIEKGRDVEFIKIGDIVSVPFN 94

Query: 86  RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGD----------VIHHFLNI 135
             CG CR+CK   +  C         N  R G +      G           V +   N+
Sbjct: 95  IACGRCRNCKEGHTGVCLNV------NPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNL 148

Query: 136 SSFTEY-----SVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIF 190
             F +       + D+T +  I P               TG   A   AGV  GSTV I 
Sbjct: 149 LKFPDRDQALEKIRDLTMLSDIFP---------------TGYHGAV-TAGVGPGSTVYIA 192

Query: 191 GLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG--ITDFINPATCGDKTVSQVIK 248
           G G VGLA A  A+L  A+ +I  D+NP +    + FG    D    AT  ++ + Q++ 
Sbjct: 193 GAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCETVDLSKDATLPEQ-IEQILG 251

Query: 249 EMTDGGADYCFECIG 263
           E      D   +C+G
Sbjct: 252 EPE---VDCAVDCVG 263

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent [Central intermediary metabolism, One-carbon metabolism]. Length = 393

>gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase

 Score = 71.7 bits (176), Expect = 7e-14
 Identities = 74/291 (25%), Positives = 126/291 (43%), Gaps = 41/291 (14%)

Query: 7   KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWK----SSTDLPKLPLPVIFGHEAVG 62
             L I+  ++ P    ++R+++    +C SDV + K    +   + +   P++ GHE  G
Sbjct: 27  NTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKE---PMVIGHECAG 83

Query: 63  VVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFR 122
           ++E VG  V+ +   D V       C  C  CK  + N C        P M    T    
Sbjct: 84  IIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLC--------PEMKFFATPPVH 135

Query: 123 -ELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPL--GIACL-LSCGVSTGVGAAWKV 178
             L   V+H              D+    K+  ++ L  G  C  LS GV      A + 
Sbjct: 136 GSLANQVVHP------------ADL--CFKLPENVSLEEGAMCEPLSVGVH-----ACRR 176

Query: 179 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATC 238
           A +   + V + G G +GL     AR   A +I+ VD++ E+  + K+ G  + +  +T 
Sbjct: 177 ANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTN 236

Query: 239 GDKTVSQV--IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGV 287
            +   S+V  I++   GG D  F+C+G    M+ A  ++R G GK  ++G+
Sbjct: 237 IEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGM 286

Length = 364

>gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase

 Score = 71.1 bits (175), Expect = 1e-13
 Identities = 78/328 (23%), Positives = 121/328 (36%), Gaps = 76/328 (23%)

Query: 5   PGKP-LVIEEIEVEPPKAWEIRIKILCTSLCHSDV--------TFWKSSTDLPKLPLPVI 55
           PGKP + + +I    P   E+ ++ L   +C +D         T       L       +
Sbjct: 8   PGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFL-------V 60

Query: 56  FGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR 115
            GHEA+GVVE VG+    +   DLV+P   R  G+C +C            R  RP+   
Sbjct: 61  LGHEALGVVEEVGD-GSGLSPGDLVVPTVRRPPGKCLNC------------RIGRPDFCE 107

Query: 116 DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LSCGVSTGV 172
            G    R +KG  +H F+      EY V D  ++VK+ P +   +  L   LS      V
Sbjct: 108 TGEYTERGIKG--LHGFM-----REYFVDDPEYLVKVPPSL-ADVGVLLEPLSV-----V 154

Query: 173 GAAWKVAGVEVGS--------TVAIFGLGAVGL-----AVAEGAR---LNRASKIIGVDI 216
             A + A   V             + G G +GL         G     LNR       D 
Sbjct: 155 EKAIEQA-EAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGFEVYVLNR------RDP 207

Query: 217 NPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSR 276
              K +I ++ G T ++N +      V         G  D   E  G+  +  +A  +  
Sbjct: 208 PDPKADIVEELGAT-YVNSSKTPVAEVK------LVGEFDLIIEATGVPPLAFEALPALA 260

Query: 277 EGWGKTVILGVEMHGSPISLNSIEILKG 304
              G  ++ GV   G    ++  E+ + 
Sbjct: 261 PN-GVVILFGVPGGGREFEVDGGELNRD 287

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355

>gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional

 Score = 71.0 bits (174), Expect = 1e-13
 Identities = 56/230 (24%), Positives = 92/230 (40%), Gaps = 31/230 (13%)

Query: 23  EIRIKILCTSLCHSDVT-FWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVL 81
           ++ +K+  + LC SD+   +K+         P+  GHE  G VE+VG  V+++   D V 
Sbjct: 27  DVLVKVASSGLCGSDIPRIFKNGAHY----YPITLGHEFSGYVEAVGSGVDDLHPGDAVA 82

Query: 82  PIFHRDCGECRDCKSSKSNTCSKFG-RGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTE 140
            +    C  C +C     + C+K+   G R    RDG                      E
Sbjct: 83  CVPLLPCFTCPECLRGFYSLCAKYDFIGSR----RDG-------------------GNAE 119

Query: 141 YSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVA 200
           Y VV   ++  +   +P+     +   ++ G+ A     G E G  V I G G +GL   
Sbjct: 120 YIVVKRKNLFALPTDMPIEDGAFIE-PITVGLHAFHLAQGCE-GKNVIIIGAGTIGLLAI 177

Query: 201 EGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEM 250
           + A    A  +  +DIN EK  + K  G     N        +  V++E+
Sbjct: 178 QCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSREMSAPQIQSVLREL 227

Length = 347

>gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

 Score = 69.2 bits (170), Expect = 5e-13
 Identities = 42/128 (32%), Positives = 60/128 (46%), Gaps = 20/128 (15%)

Query: 179 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT--DFINPA 236
           AGV+ G TVA+FG G VGL  A  A L  AS++  VD  PE+ ++ +  G    DF +  
Sbjct: 172 AGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAIPIDFSD-- 229

Query: 237 TCGDKTVSQVIKEMTDGGADYCFECIGLTS-----------VMNDAFNSSREGWGKTVIL 285
             GD    + I  +  GG D   +C+G  +           V+N     +R G G   I+
Sbjct: 230 --GDP--VEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG-GGIGIV 284

Query: 286 GVEMHGSP 293
           GV +   P
Sbjct: 285 GVYVAEDP 292

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score = 67.2 bits (165), Expect = 2e-12
 Identities = 55/266 (20%), Positives = 88/266 (33%), Gaps = 66/266 (24%)

Query: 6   GKPLVIEEIEVEPPKAW--EIRIKILCTSLCHSDVTFWKSST-DLPKLPLPVIFGHEAVG 62
           G P V+E  +V  P+    E+ +K+    +   D+   +        L LP+I GH+  G
Sbjct: 10  GGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAG 69

Query: 63  VVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFR 122
           VV +VG  V   K  D V                        FG        R G     
Sbjct: 70  VVVAVGPGVTGFKVGDEV------------------------FG---MTPFTRGGA---- 98

Query: 123 ELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAW----KV 178
                          + EY VV    +     ++    A      +      AW    ++
Sbjct: 99  ---------------YAEYVVVPADELALKPANLSFEEA----AALPLAGLTAWQALFEL 139

Query: 179 AGVEVGSTVAIFG-LGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPAT 237
            G++ G TV I G  G VG    + A+  R +++I    +    +  +  G  + I    
Sbjct: 140 GGLKAGQTVLIHGAAGGVGSFAVQLAK-ARGARVIAT-ASAANADFLRSLGADEVI---- 193

Query: 238 CGDKTVSQVIKEMTDGGADYCFECIG 263
             D T     +    GG D   + +G
Sbjct: 194 --DYTKGDFERAAAPGGVDAVLDTVG 217

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase

 Score = 65.0 bits (158), Expect = 1e-11
 Identities = 89/340 (26%), Positives = 136/340 (40%), Gaps = 44/340 (12%)

Query: 23  EIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLV-L 81
           ++ +KIL   +CHSD+   K+     + P  +I GHE VG+   VG+ V + KE D V +
Sbjct: 33  DVTVKILFCGVCHSDLHTIKNHWGFSRYP--IIPGHEIVGIATKVGKNVTKFKEGDRVGV 90

Query: 82  PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEY 141
            +    C  C  C     N C K    Y  +   DGT               N   +++ 
Sbjct: 91  GVIIGSCQSCESCNQDLENYCPKVVFTYN-SRSSDGTR--------------NQGGYSDV 135

Query: 142 SVVDITHVVKITPHIPLGI-ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVG-LAV 199
            VVD   V+ I   +P    A LL  G++      +     E G  + + GLG +G +AV
Sbjct: 136 IVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAV 195

Query: 200 AEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCF 259
             G        +I      E+  I  + G   F+        T SQ +KE   G  D+  
Sbjct: 196 KIGKAFGLRVTVISRSSEKEREAI-DRLGADSFLV------TTDSQKMKEAV-GTMDFII 247

Query: 260 ECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS-VCGTYFGGLKPR 318
           + +     +   F+  +   GK V LG  +   P+ L    ++ GR  V G+  GG+K  
Sbjct: 248 DTVSAEHALLPLFSLLKVS-GKLVALG--LPEKPLDLPIFPLVLGRKMVGGSQIGGMKET 304

Query: 319 SDIATLAQKY---LDKELNLGEFITHEVSFHDINKAFDLL 355
            ++     K+    D EL         +   DIN A D L
Sbjct: 305 QEMLEFCAKHKIVSDIEL---------IKMSDINSAMDRL 335

Length = 375

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score = 64.4 bits (158), Expect = 1e-11
 Identities = 83/367 (22%), Positives = 135/367 (36%), Gaps = 70/367 (19%)

Query: 6   GKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGV 63
           G P  LV+EE+  EP    E+RI++    +   D+   +    + K PLP + G E  GV
Sbjct: 10  GGPEDLVLEEVPPEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQV-KPPLPFVPGSEVAGV 68

Query: 64  VESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRE 123
           VE+VGE V   K                                                
Sbjct: 69  VEAVGEGVTGFKV----------------------------------------------- 81

Query: 124 LKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEV 183
             GD +        F E  VV    V  +   +    A  L     T   A  + A ++ 
Sbjct: 82  --GDRVVALTGQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQP 139

Query: 184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT 242
           G TV + G  G VGLA  + A+   A ++I    + EK  + +  G    I+     D  
Sbjct: 140 GETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVID---YRDPD 195

Query: 243 VSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP-ISLNSIE 300
           + + +K +T G G D  ++ +G   V   +  S   G G+ +++G      P I  N + 
Sbjct: 196 LRERVKALTGGRGVDVVYDPVGG-DVFEASLRSLAWG-GRLLVIGFASGEIPQIPANLL- 252

Query: 301 ILKGRSVCGTYFGGL------KPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDL 354
           +LK  SV G Y+G          R+++A L     + ++     ++         +A   
Sbjct: 253 LLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIR--PHVSAVFPLEQAAEALRA 310

Query: 355 LLEGKSL 361
           L + K+ 
Sbjct: 311 LADRKAT 317

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

 Score = 63.0 bits (154), Expect = 5e-11
 Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 18/118 (15%)

Query: 6   GKPLVIEEIEVEPPKAWEIR------IKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHE 59
           G P  +   +V  PK   I       ++I  T++C SD+  ++  T        ++ GHE
Sbjct: 7   GGPGNVAVEDVPDPK---IEHPTDAIVRITTTAICGSDLHMYRGRTGAEP---GLVLGHE 60

Query: 60  AVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDG 117
           A+G VE VG  VE +K  D V+  F+  CG CR+CK   +  C         N  R G
Sbjct: 61  AMGEVEEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCL------TVNPGRAG 112

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375

>gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional

 Score = 61.6 bits (150), Expect = 1e-10
 Identities = 63/286 (22%), Positives = 107/286 (37%), Gaps = 56/286 (19%)

Query: 26  IKILCTSLCHSDVTFWK-SSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIF 84
           ++I    +C SD+ +++        +  P++ GHE +G +        +  +   + P  
Sbjct: 32  VQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHSDSSGLKEGQTVAINP-- 89

Query: 85  HRDCGECRDCKSSKSNTCSK---FGRG-YRPNMPRDGTSRFRELKGDVIHHFLNISSFTE 140
            + CG C+ C S   N C+    FG   Y P++  DG                    FT 
Sbjct: 90  SKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHV--DG-------------------GFTR 128

Query: 141 YSVVDITHVVKITPHI---------PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFG 191
           Y VVD    +               PL +A          + AA   AG   G  V + G
Sbjct: 129 YKVVDTAQCIPYPEKADEKVMAFAEPLAVA----------IHAA-HQAGDLQGKRVFVSG 177

Query: 192 LGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMT 251
           +G +G  +    +   A++I+  D++P    + ++ G    +NP    +  +     E  
Sbjct: 178 VGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNP---QNDDLDHYKAE-- 232

Query: 252 DGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLN 297
            G  D  FE  G  S +N     +R    K V++ V M G+P    
Sbjct: 233 KGYFDVSFEVSGHPSSINTCLEVTR---AKGVMVQVGMGGAPPEFP 275

Length = 343

>gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase

 Score = 61.0 bits (148), Expect = 3e-10
 Identities = 59/214 (27%), Positives = 93/214 (43%), Gaps = 22/214 (10%)

Query: 23  EIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLV-L 81
           ++ +KIL   +CHSD+   K+     + P+  + GHE VG+V  +G+ V++ KE D V +
Sbjct: 39  DVTVKILYCGVCHSDLHTIKNEWGFTRYPI--VPGHEIVGIVTKLGKNVKKFKEGDRVGV 96

Query: 82  PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEY 141
            +    C  C  C     N C K    Y  ++  DGT               N   +++ 
Sbjct: 97  GVIVGSCKSCESCDQDLENYCPKMIFTYN-SIGHDGTK--------------NYGGYSDM 141

Query: 142 SVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGV-EVGSTVAIFGLGAVG-LAV 199
            VVD   V++   ++PL     L C   T V +  K  G+ E G  + + GLG +G +AV
Sbjct: 142 IVVDQHFVLRFPDNLPLDAGAPLLCAGIT-VYSPMKYYGMTEPGKHLGVAGLGGLGHVAV 200

Query: 200 AEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 233
             G        +I    N E   I  + G   F+
Sbjct: 201 KIGKAFGLKVTVISSSSNKEDEAI-NRLGADSFL 233

Length = 360

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score = 58.1 bits (141), Expect = 2e-09
 Identities = 56/206 (27%), Positives = 83/206 (40%), Gaps = 40/206 (19%)

Query: 9   LVIEEIEVEPPKAWEIRIKILCTSLCHSD---VTFWKSSTDLPKLPLPVIFGHEAVGVVE 65
           L +E+++   P   E+ I++    +   D   +   K        P+P I G E  GVVE
Sbjct: 14  LKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVKVK------PMPHIPGAEFAGVVE 67

Query: 66  SVGEYVEEVKERDLVLPIFHRD-CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFREL 124
            VG++V+ VK+ D V+ +++R   G C  C S     C     G    +  +G       
Sbjct: 68  EVGDHVKGVKKGDRVV-VYNRVFDGTCDMCLSGNEMLCRN---GGIIGVVSNG------- 116

Query: 125 KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVG 184
                        + EY VV   ++ KI   I   +A  L     T   A  K AG+  G
Sbjct: 117 ------------GYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHAL-KTAGLGPG 163

Query: 185 STVAIF------GLGAVGLAVAEGAR 204
            TV +F      G+ AV LA   GA 
Sbjct: 164 ETVVVFGASGNTGIFAVQLAKMMGAE 189

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score = 57.8 bits (141), Expect = 2e-09
 Identities = 66/269 (24%), Positives = 93/269 (34%), Gaps = 82/269 (30%)

Query: 9   LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG 68
           L  E++ V  P   E+ ++     +   D  F    + L  LPLP + G E  GVVE+VG
Sbjct: 14  LEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYF---RSGLYPLPLPFVLGVEGAGVVEAVG 70

Query: 69  EYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDV 128
             V   K  D V                         G                      
Sbjct: 71  PGVTGFKVGDRVA-------------------YAGPPG---------------------- 89

Query: 129 IHHFLNISSFTEYSVVDITHVVKITPHIPLGIA--CLLSCGVSTGVG-AAW----KVAGV 181
                   ++ EY VV  + +VK+   I    A   LL        G  A     +   V
Sbjct: 90  --------AYAEYRVVPASRLVKLPDGISDETAAALLLQ-------GLTAHYLLRETYPV 134

Query: 182 EVGSTVAIFGL-GAVGL-----AVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 235
           + G TV +    G VGL     A A GA       +IG   + EK E+ +  G    IN 
Sbjct: 135 KPGDTVLVHAAAGGVGLLLTQWAKALGAT------VIGTVSSEEKAELARAAGADHVIN- 187

Query: 236 ATCGDKTVSQVIKEMTDG-GADYCFECIG 263
               D  V +V +E+T G G D  ++ +G
Sbjct: 188 YRDED-FVERV-REITGGRGVDVVYDGVG 214

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 55.3 bits (134), Expect = 1e-08
 Identities = 82/369 (22%), Positives = 131/369 (35%), Gaps = 93/369 (25%)

Query: 6   GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVE 65
           G  L +E++    P   E  +++L   +C++D+  +K        P P + GHE VG+VE
Sbjct: 9   GLDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYY-----PFPGVPGHEFVGIVE 63

Query: 66  SVGEYVEEVKERDLVLPI-FHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFREL 124
              E   E+  + +V  I     CG C  C+      C        PN         R +
Sbjct: 64  EGPE--AELVGKRVVGEINIA--CGRCEYCRRGLYTHC--------PN---------RTV 102

Query: 125 KGDVIHHFLNISSFTEYSV--VDITHVVKITPHI----------PLGIACLLSCGVSTGV 172
            G V        +F EY    ++  HVV   P +          PL  A           
Sbjct: 103 LGIVDRD----GAFAEYLTLPLENLHVV---PDLVPDEQAVFAEPLAAAL---------- 145

Query: 173 GAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 232
               +   +  G  VA+ G G +GL +A+   L     ++ V  + EK  + ++ G+   
Sbjct: 146 -EILEQVPITPGDKVAVLGDGKLGLLIAQVLALT-GPDVVLVGRHSEKLALARRLGVE-- 201

Query: 233 INPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSR-EGWGKTVILGVEMHG 291
                    TV     E   GG D   E  G  S +  A    R  G   TV+L    + 
Sbjct: 202 ---------TVLPDEAESEGGGFDVVVEATGSPSGLELALRLVRPRG---TVVLK-STYA 248

Query: 292 SPISLN-------SIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVS 344
            P S +        I ++  R  CG +         +  L +  +D +      IT    
Sbjct: 249 GPASFDLTKAVVNEITLVGSR--CGPF------APALRLLRKGLVDVD----PLITAVYP 296

Query: 345 FHDINKAFD 353
             +  +AF+
Sbjct: 297 LEEALEAFE 305

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 55.2 bits (134), Expect = 2e-08
 Identities = 64/261 (24%), Positives = 93/261 (35%), Gaps = 43/261 (16%)

Query: 9   LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG 68
           L + E  V  P   E+ +++   SL + D+         P +  P+I   +  G V +VG
Sbjct: 15  LKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNG-RYPPPVKDPLIPLSDGAGEVVAVG 73

Query: 69  EYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDV 128
           E V   K  D V+P F  +             T            P DG           
Sbjct: 74  EGVTRFKVGDRVVPTFFPNWL-------DGPPTAEDEASALGG--PIDGVLA-------- 116

Query: 129 IHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVA 188
                      EY V+    +V+   H+    A  L C   T   A + +  ++ G TV 
Sbjct: 117 -----------EYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKPGDTVL 165

Query: 189 IFGLGAVGL-----AVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTV 243
           + G G V L     A A GAR      +I    + EK E  K  G    IN  T  D   
Sbjct: 166 VQGTGGVSLFALQFAKAAGAR------VIATSSSDEKLERAKALGADHVINYRTTPD--W 217

Query: 244 SQVIKEMTDG-GADYCFECIG 263
            + + ++T G G D+  E  G
Sbjct: 218 GEEVLKLTGGRGVDHVVEVGG 238

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase

 Score = 53.6 bits (129), Expect = 6e-08
 Identities = 53/180 (29%), Positives = 72/180 (40%), Gaps = 38/180 (21%)

Query: 23  EIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLV-L 81
           ++ IK++   +CH+D+   K+  DL     P++ GHE VG V  VG  V +    D+V +
Sbjct: 36  DVVIKVIYCGICHTDLHQIKN--DLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGV 93

Query: 82  PIFHRDCGECRDCKSSKSNTCSK----FGRGYRPNMPRDGTSRFRELKGDVIHHFLNISS 137
            +    CGEC  CKS     C+K    +   Y    P  G                    
Sbjct: 94  GVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQG-------------------G 134

Query: 138 FTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGL 197
           F    VVD   VVKI   +    A  L C            AGV V S ++ FGL   GL
Sbjct: 135 FASAMVVDQKFVVKIPEGMAPEQAAPLLC------------AGVTVYSPLSHFGLKQSGL 182

Length = 357

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score = 53.1 bits (128), Expect = 8e-08
 Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 17/89 (19%)

Query: 5  PGKPLVIEEIEVEPPKAW--EIRIKILCTSLCHSDVTFWKSSTDLP-------KLPLPVI 55
             PLV+E + +  P     E+ +++L   +  SD+        +        + PLP +
Sbjct: 8  EPLPLVLELVSLPIPPPGPGEVLVRMLAAPINPSDL--------ITISGAYGSRPPLPAV 59

Query: 56 FGHEAVGVVESVGEYVEEVKERDLVLPIF 84
           G+E VGVV  VG  V  +     VLP+ 
Sbjct: 60 PGNEGVGVVVEVGSGVSGLLVGQRVLPLG 88

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score = 51.6 bits (124), Expect = 3e-07
 Identities = 70/315 (22%), Positives = 109/315 (34%), Gaps = 61/315 (19%)

Query: 9   LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG 68
           L I E     PK  ++ IK+    +  +D    +     P     ++ G E  G VE VG
Sbjct: 16  LKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEIL-GLEVAGYVEDVG 74

Query: 69  EYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDV 128
             V+  KE D V+ +                      G GY                   
Sbjct: 75  SDVKRFKEGDRVMALLP--------------------GGGY------------------- 95

Query: 129 IHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVA 188
                      EY+V    HV+ I        A  +     T      K   V+ G +V 
Sbjct: 96  ----------AEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVL 145

Query: 189 IF-GLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVI 247
           I  G   VG A A+ A    A+ II    + EK +  KK      I           +V 
Sbjct: 146 IHAGASGVGTAAAQLAEKYGAATIITTS-SEEKVDFCKKLAAIILIRYPDEEGFA-PKVK 203

Query: 248 KEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS-LNSIEILKGR- 305
           K   + G +   +C+G + +   A   + +  GK ++ G  M G+ +   N + +L+ R 
Sbjct: 204 KLTGEKGVNLVLDCVGGSYLSETAEVLAVD--GKWIVYGF-MGGAKVEKFNLLPLLRKRA 260

Query: 306 SVCGTYFGGLKPRSD 320
           S+  +    L+ RSD
Sbjct: 261 SIIFST---LRSRSD 272

Length = 334

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 50.0 bits (120), Expect = 8e-07
 Identities = 68/264 (25%), Positives = 93/264 (35%), Gaps = 69/264 (26%)

Query: 9   LVIEEIEVEPPKAWEIRIKILCTSLCHSD--VTFWKSSTDLPKLPLPVIFGHEAVGVVES 66
           L +EEIE+  P A E+ +K+    L   D  V  W           P + G +  GVV +
Sbjct: 15  LTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAW----SYPHVPGVDGAGVVVA 70

Query: 67  VGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 126
           VG  V   K  D V                            Y  ++ R G         
Sbjct: 71  VGAKVTGWKVGDRVA---------------------------YHASLARGG--------- 94

Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGST 186
                     SF EY+VVD   V+ +   +    A  L C   T   A +K   +E G T
Sbjct: 95  ----------SFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRT 144

Query: 187 VAIFGL-GAVG-----LAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 240
           + I G  G VG     LA   G R       +    +   FE  K  G    I+     D
Sbjct: 145 ILITGGAGGVGSFAVQLAKRAGLR-------VITTCSKRNFEYVKSLGADHVID---YND 194

Query: 241 KTVSQVIKEMTDG-GADYCFECIG 263
           + V + IKE+T G G D   + +G
Sbjct: 195 EDVCERIKEITGGRGVDAVLDTVG 218

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score = 49.5 bits (119), Expect = 1e-06
 Identities = 60/260 (23%), Positives = 97/260 (37%), Gaps = 63/260 (24%)

Query: 9   LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG 68
           L + ++ V  P   E+ +++  + +   D T+ ++       PLP + G +  GVVE+VG
Sbjct: 15  LRLGDLPVPTPGPGEVLVRVHASGVNPVD-TYIRAGAYPGLPPLPYVPGSDGAGVVEAVG 73

Query: 69  EYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDV 128
           E V+ +K  D V                      +  G G R      GT          
Sbjct: 74  EGVDGLKVGDRVW--------------------LTNLGWGRRQ-----GT---------- 98

Query: 129 IHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGA--AWKV----AGVE 182
                      EY VV    +V +   +          G + G+ A  A++     AG +
Sbjct: 99  ---------AAEYVVVPADQLVPLPDGVS------FEQGAALGIPALTAYRALFHRAGAK 143

Query: 183 VGSTVAIFG-LGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 241
            G TV + G  GAVG A  + AR   A ++I    + E  E+ ++ G     N      +
Sbjct: 144 AGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFNYR---AE 199

Query: 242 TVSQVIKEMTDG-GADYCFE 260
            ++  I   T G G D   E
Sbjct: 200 DLADRILAATAGQGVDVIIE 219

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2

 Score = 49.3 bits (118), Expect = 1e-06
 Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 6/74 (8%)

Query: 6  GKPL-VIEEIEVEP--PKAWEIRIKILCTSLCHSDVTFWK-SSTDLPKLPLPVIFGHEAV 61
          G P  V+E  EV    P A E+ ++   + + + D+  W    T   K  LP I G EAV
Sbjct: 10 GDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDL--WTIRGTYGYKPELPAIGGSEAV 67

Query: 62 GVVESVGEYVEEVK 75
          GVV++VGE V+ ++
Sbjct: 68 GVVDAVGEGVKGLQ 81

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 48.7 bits (117), Expect = 2e-06
 Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 3/79 (3%)

Query: 5  PGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVG 62
           G P  L IEE+ V  P A E+ I++    L  +D   ++    +   PLP   G+EA G
Sbjct: 9  FGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADA-MFRRGAYIEPPPLPARLGYEAAG 67

Query: 63 VVESVGEYVEEVKERDLVL 81
          VVE+VG  V      D V 
Sbjct: 68 VVEAVGAGVTGFAVGDRVS 86

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|176209 cd08247, AST1_like, AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

 Score = 48.4 bits (116), Expect = 2e-06
 Identities = 74/382 (19%), Positives = 129/382 (33%), Gaps = 74/382 (19%)

Query: 5   PGKPLVIEEIEVEPPKAW---EIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAV 61
              PL I  I++  P  +   EI +K+   +L   D+  + S T   K+      G +  
Sbjct: 9   NTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVK-EKGLGRDYS 67

Query: 62  GVVESVGEYVE-EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSR 120
           GV+  VG  V  E K  D V  I+                                    
Sbjct: 68  GVIVKVGSNVASEWKVGDEVCGIYP----------------------------------- 92

Query: 121 FRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKV-- 178
                    H +    + ++Y +VD     K     P  I+   +      +G A+++  
Sbjct: 93  ---------HPYGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILE 143

Query: 179 -AGVEVG--STVAIFGLG-AVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKFGITDFI 233
             G ++G  S V + G   +VG    + A+ +     ++G   +    E+ KK G   FI
Sbjct: 144 DLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGT-CSSRSAELNKKLGADHFI 202

Query: 234 NPATC-GDKTVSQVIKEMTDGGA-DYCFECIG---LTSVMNDAFNSSREGWGKTVILGVE 288
           +     G K +  V++ +   G  D   +C+G   L   +N       +      I+G  
Sbjct: 203 DYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDY 262

Query: 289 MHG-SPISLNSIEILKG--RSVCGT-------Y-FGGLKPRSDIATLAQKYLDKELNLGE 337
                  + NS +      R + G+       Y F  L P +D      + +     +  
Sbjct: 263 KANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFLLDPNADWIEKCAELIADG-KVKP 321

Query: 338 FITHEVSFHDINKAFDLLLEGK 359
            I     F D  +AF+ L   +
Sbjct: 322 PIDSVYPFEDYKEAFERLKSNR 343

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 352

>gnl|CDD|176200 cd08238, sorbose_phosphate_red, L-sorbose-1-phosphate reductase

 Score = 47.0 bits (112), Expect = 7e-06
 Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 6/73 (8%)

Query: 3  RIPGK-PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLP-----LPVIF 56
          R+ GK  L +E+ E+      EI ++++  SLC S        +D  K+P      PVI 
Sbjct: 7  RMYGKGDLRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVIL 66

Query: 57 GHEAVGVVESVGE 69
          GHE  G +  VG+
Sbjct: 67 GHEFAGTILKVGK 79

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 410

>gnl|CDD|131869 TIGR02822, adh_fam_2, zinc-binding alcohol dehydrogenase family protein

 Score = 46.1 bits (109), Expect = 2e-05
 Identities = 30/96 (31%), Positives = 39/96 (40%), Gaps = 3/96 (3%)

Query: 8   PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESV 67
           PL   E  V  P   E+ +++    +C +D+    S  DLP     V  GHE VG V   
Sbjct: 14  PLRFVERPVPRPGPGELLVRVRACGVCRTDLHV--SEGDLPVHRPRVTPGHEVVGEVAGR 71

Query: 68  GEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTC 102
           G         D V +    R CG CR C+    N C
Sbjct: 72  GADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLC 107

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized [Energy metabolism, Fermentation]. Length = 329

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 45.7 bits (109), Expect = 2e-05
 Identities = 73/386 (18%), Positives = 121/386 (31%), Gaps = 112/386 (29%)

Query: 9   LVIEEIEVEPPKAWEIRIKILCTSLCHSDVT----FWKSSTDLPKLPLPVIFGHEAVGVV 64
           L + E ++  P A E+ +K+  + +  +DV      +    D P  PLP   G++ VG V
Sbjct: 15  LKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLY---PDQP--PLPFTPGYDLVGRV 69

Query: 65  ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFREL 124
           +++G  V   +  D V  +                                 G + +   
Sbjct: 70  DALGSGVTGFEVGDRVAAL-----------------------------TRVGGNAEYI-- 98

Query: 125 KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAW----KVAG 180
                              +D  ++V +   +    A    C V   V  A+    + A 
Sbjct: 99  ------------------NLDAKYLVPVPEGVDAAEA---VCLVLNYV-TAYQMLHRAAK 136

Query: 181 VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKF-----EIGKKFGITDFIN 234
           V  G  V I G  G VG A+ E A L  A ++ G     E+      E+G          
Sbjct: 137 VLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTA--SERNHAALRELG---------- 183

Query: 235 PATCGDKTVSQVIKEM-TDGGADYCFECIGLTSVMNDAFNSSRE---------GWGKTVI 284
            AT  D      +  M T GG D  F+ +G      +++  S            +G    
Sbjct: 184 -ATPIDYRTKDWLPAMLTPGGVDVVFDGVGG-----ESYEESYAALAPGGTLVCYGGNSS 237

Query: 285 LGVEMHGSPISLN-SIEILKGRSVCG---TYFGGLKP--RSDIATLAQ--KYLDKELNLG 336
           L           +    + K + +       F  +      D     Q    L   L  G
Sbjct: 238 LLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKG 297

Query: 337 EF---ITHEVSFHDINKAFDLLLEGK 359
           +    I   +   ++ +A  LL  GK
Sbjct: 298 KIRPKIAKRLPLSEVAEAHRLLESGK 323

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 44.9 bits (107), Expect = 4e-05
 Identities = 76/375 (20%), Positives = 118/375 (31%), Gaps = 88/375 (23%)

Query: 5   PGKPLVIEEIEVEPPKAW--EIRIKILCTSLCHSDVTFWKSSTDLP-KLPLPVIFGHEAV 61
             + L++ E+EV  P     E+ +K+   S+   D    +    L    P P I G +  
Sbjct: 8   SPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFA 67

Query: 62  GVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRF 121
           G V +VG  V   K  D V                        FGR         G    
Sbjct: 68  GEVVAVGSGVTRFKVGDEV------------------------FGRL---PPKGGGA--- 97

Query: 122 RELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI-----ACLLSCGVSTGVGAAW 176
                             EY V   + + K     P G+     A L   G+ T + A  
Sbjct: 98  ----------------LAEYVVAPESGLAK----KPEGVSFEEAAALPVAGL-TALQALR 136

Query: 177 KVAGVEVGSTVAIFGL-GAVG-----LAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 230
               V+ G  V I G  G VG     +A A GA       + GV  +    E+ +  G  
Sbjct: 137 DAGKVKPGQRVLINGASGGVGTFAVQIAKALGAH------VTGVC-STRNAELVRSLGAD 189

Query: 231 DFINPATCGDKTVSQVIKEMTDGGA-DYCFECIGLTSVMNDAFNSSRE-GWGKTVILGVE 288
           + I      D T    +     G   D  F+ +G +      + +S     G   +  V 
Sbjct: 190 EVI------DYTTEDFVALTAGGEKYDVIFDAVGNSPF--SLYRASLALKPGGRYVS-VG 240

Query: 289 MHGSPISLNSIEILKGRSVCG---TYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSF 345
              S + L  + +       G    +F       D+  LA+   + +L     I      
Sbjct: 241 GGPSGLLLVLLLLPLTLGGGGRRLKFFLAKPNAEDLEQLAELVEEGKLKP--VIDSVYPL 298

Query: 346 HDINKAFDLLLEGKS 360
            D  +A+  L  G++
Sbjct: 299 EDAPEAYRRLKSGRA 313

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score = 44.9 bits (107), Expect = 4e-05
 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)

Query: 2  QRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAV 61
          + +  K L + E EV  P   E+ IK+    +  SD+ F K      K  LPV  G E  
Sbjct: 11 KPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTK-ALPVPPGFEGS 69

Query: 62 GVVESVGE 69
          G V + G 
Sbjct: 70 GTVVAAGG 77

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|133444 cd01075, NAD_bind_Leu_Phe_Val_DH, NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

 Score = 40.3 bits (95), Expect = 5e-04
 Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 7/70 (10%)

Query: 166 CGVSTGVGAAWKVA----GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK- 220
            GV  G+ AA +       +E G TVA+ GLG VG  +AE   L   +K+I  DIN E  
Sbjct: 7   YGVFLGMKAAAEHLLGTDSLE-GKTVAVQGLGKVGYKLAEHL-LEEGAKLIVADINEEAV 64

Query: 221 FEIGKKFGIT 230
               + FG T
Sbjct: 65  ARAAELFGAT 74

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an alpha-beta-alpha configuration. NAD binding involves numerous hydrogen and van der Waals contacts. Length = 200

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score = 40.3 bits (95), Expect = 7e-04
 Identities = 15/32 (46%), Positives = 18/32 (56%)

Query: 49 KLPLPVIFGHEAVGVVESVGEYVEEVKERDLV 80
          KLPLP+  G+ +VG V  VG  V   K  D V
Sbjct: 17 KLPLPLPPGYSSVGRVVEVGSGVTGFKPGDRV 48

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 39.5 bits (93), Expect = 0.002
 Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 3/78 (3%)

Query: 5  PGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVG 62
           G P    + E+    P   ++ +++  + +   D    +        PLP I G +  G
Sbjct: 9  FGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAAR-PPLPAILGCDVAG 67

Query: 63 VVESVGEYVEEVKERDLV 80
          VVE+VGE V   +  D V
Sbjct: 68 VVEAVGEGVTRFRVGDEV 85

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 38.7 bits (91), Expect = 0.003
 Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 7/85 (8%)

Query: 5  PGKP---LVIEEIEVEPPKAW-EIRIKILCTSLCHSDV-TFWKSSTDLPKL--PLPVIFG 57
           G+P   L +E  E+ PP    E+ +K+L   +  +D+          P      P + G
Sbjct: 9  HGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGG 68

Query: 58 HEAVGVVESVGEYVEEVKERDLVLP 82
          +E VG V  VG  V+ +K  D V+P
Sbjct: 69 NEGVGEVVKVGSGVKSLKPGDWVIP 93

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	371
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
PRK10083	339	putative oxidoreductase; Provisional	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	100.0
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	100.0
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	100.0
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	100.0
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	100.0
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	100.0
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	100.0
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	100.0
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	100.0
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	100.0
PRK13771	334	putative alcohol dehydrogenase; Provisional	100.0
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	100.0
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	100.0
PLN02702	364	L-idonate 5-dehydrogenase	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	100.0
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	100.0
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	100.0
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	100.0
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	100.0
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	100.0
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	100.0
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	100.0
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	100.0
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	100.0
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	100.0
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	100.0
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	100.0
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	100.0
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	100.0
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	100.0
PTZ00354	334	alcohol dehydrogenase; Provisional	100.0
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	100.0
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	100.0
COG2130	340	Putative NADP-dependent oxidoreductases [General f	100.0
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	100.0
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	100.0
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	100.0
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	100.0
cd08252	336	AL_MDR Arginate lyase and other MDR family members	100.0
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	100.0
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	100.0
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	100.0
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	100.0
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	100.0
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	100.0
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	100.0
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	100.0
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	100.0
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	100.0
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	99.98
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.98
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	99.98
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	99.98
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.97
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.96
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.96
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	99.94
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.89
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.75
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	99.46
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.28
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	99.21
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.56
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	98.55
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	98.48
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.28
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.22
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	98.14
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	98.05
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	98.03
PLN02494	477	adenosylhomocysteinase	97.98
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	97.98
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.83
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.82
PTZ00075	476	Adenosylhomocysteinase; Provisional	97.75
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.69
PRK08324	681	short chain dehydrogenase; Validated	97.66
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	97.47
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	97.46
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	97.43
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.41
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	97.34
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	97.34
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	97.28
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	97.22
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	97.21
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	97.15
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	97.12
COG0300	265	DltE Short-chain dehydrogenases of various substra	97.09
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.04
PRK05993	277	short chain dehydrogenase; Provisional	96.98
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	96.95
PRK07326	237	short chain dehydrogenase; Provisional	96.95
PRK12742	237	oxidoreductase; Provisional	96.94
PRK05693	274	short chain dehydrogenase; Provisional	96.93
PRK08177	225	short chain dehydrogenase; Provisional	96.9
PLN03209	576	translocon at the inner envelope of chloroplast su	96.9
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	96.87
PRK06182	273	short chain dehydrogenase; Validated	96.87
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	96.87
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	96.85
PRK08265	261	short chain dehydrogenase; Provisional	96.85
TIGR00438	188	rrmJ cell division protein FtsJ.	96.84
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.81
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.79
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	96.77
PRK06949	258	short chain dehydrogenase; Provisional	96.77
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.76
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	96.74
PRK04148	134	hypothetical protein; Provisional	96.74
PRK06057	255	short chain dehydrogenase; Provisional	96.72
PRK07109	334	short chain dehydrogenase; Provisional	96.72
PRK07806	248	short chain dehydrogenase; Provisional	96.7
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	96.7
PRK12828	239	short chain dehydrogenase; Provisional	96.7
PRK08017	256	oxidoreductase; Provisional	96.69
PRK12939	250	short chain dehydrogenase; Provisional	96.69
PRK07060	245	short chain dehydrogenase; Provisional	96.68
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	96.68
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.67
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.67
PRK12829	264	short chain dehydrogenase; Provisional	96.64
PRK06139	330	short chain dehydrogenase; Provisional	96.64
PRK14967	223	putative methyltransferase; Provisional	96.58
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.57
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	96.57
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	96.55
PRK07825	273	short chain dehydrogenase; Provisional	96.54
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.54
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.5
PRK05867	253	short chain dehydrogenase; Provisional	96.49
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	96.49
PRK08628	258	short chain dehydrogenase; Provisional	96.48
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	96.48
PRK05866	293	short chain dehydrogenase; Provisional	96.47
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.47
PRK07814	263	short chain dehydrogenase; Provisional	96.46
PRK07677	252	short chain dehydrogenase; Provisional	96.45
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.44
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.42
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.42
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	96.42
PRK05872	296	short chain dehydrogenase; Provisional	96.41
PRK09186	256	flagellin modification protein A; Provisional	96.4
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.38
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	96.37
PRK06841	255	short chain dehydrogenase; Provisional	96.36
PRK06180	277	short chain dehydrogenase; Provisional	96.36
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	96.35
PRK07831	262	short chain dehydrogenase; Provisional	96.35
PRK06196	315	oxidoreductase; Provisional	96.34
PRK06500	249	short chain dehydrogenase; Provisional	96.33
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.32
PRK08339	263	short chain dehydrogenase; Provisional	96.32
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	96.32
PRK07062	265	short chain dehydrogenase; Provisional	96.32
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	96.31
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.29
PF06325	295	PrmA: Ribosomal protein L11 methyltransferase (Prm	96.28
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.28
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	96.28
PRK08263	275	short chain dehydrogenase; Provisional	96.27
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.27
PRK07478	254	short chain dehydrogenase; Provisional	96.26
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	96.23
PRK06484	520	short chain dehydrogenase; Validated	96.22
PRK07904	253	short chain dehydrogenase; Provisional	96.22
PRK07576	264	short chain dehydrogenase; Provisional	96.21
COG3288	356	PntA NAD/NADP transhydrogenase alpha subunit [Ener	96.2
PLN02366	308	spermidine synthase	96.2
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.19
PRK07454	241	short chain dehydrogenase; Provisional	96.18
PLN02780	320	ketoreductase/ oxidoreductase	96.18
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	96.17
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.17
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	96.16
PRK07523	255	gluconate 5-dehydrogenase; Provisional	96.16
PRK08618	325	ornithine cyclodeaminase; Validated	96.16
PRK06128	300	oxidoreductase; Provisional	96.15
PRK07832	272	short chain dehydrogenase; Provisional	96.15
PRK05875	276	short chain dehydrogenase; Provisional	96.14
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.14
PRK06953	222	short chain dehydrogenase; Provisional	96.14
PRK09291	257	short chain dehydrogenase; Provisional	96.14
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	96.14
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	96.13
PRK07063	260	short chain dehydrogenase; Provisional	96.13
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	96.11
PRK05717	255	oxidoreductase; Validated	96.11
PRK06138	252	short chain dehydrogenase; Provisional	96.09
CHL00194	317	ycf39 Ycf39; Provisional	96.09
PRK00811	283	spermidine synthase; Provisional	96.08
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.07
COG4122	219	Predicted O-methyltransferase [General function pr	96.07
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	96.05
PRK07890	258	short chain dehydrogenase; Provisional	96.04
PRK08213	259	gluconate 5-dehydrogenase; Provisional	96.04
PRK07035	252	short chain dehydrogenase; Provisional	96.03
PRK09072	263	short chain dehydrogenase; Provisional	96.01
PRK00536	262	speE spermidine synthase; Provisional	96.01
PRK07774	250	short chain dehydrogenase; Provisional	96.0
PRK07402	196	precorrin-6B methylase; Provisional	96.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	96.0
PRK12548	289	shikimate 5-dehydrogenase; Provisional	95.99
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	95.97
PRK05854	313	short chain dehydrogenase; Provisional	95.97
PRK06194	287	hypothetical protein; Provisional	95.97
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	95.96
PRK11207	197	tellurite resistance protein TehB; Provisional	95.96
PRK08340	259	glucose-1-dehydrogenase; Provisional	95.93
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	95.93
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	95.92
PRK06197	306	short chain dehydrogenase; Provisional	95.91
PRK08267	260	short chain dehydrogenase; Provisional	95.91
PRK09242	257	tropinone reductase; Provisional	95.91
PRK08703	239	short chain dehydrogenase; Provisional	95.9
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.9
PRK08643	256	acetoin reductase; Validated	95.89
PRK06172	253	short chain dehydrogenase; Provisional	95.89
PRK06181	263	short chain dehydrogenase; Provisional	95.89
PRK07985	294	oxidoreductase; Provisional	95.89
PRK08085	254	gluconate 5-dehydrogenase; Provisional	95.87
PLN02781	234	Probable caffeoyl-CoA O-methyltransferase	95.86
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	95.84
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	95.83
TIGR01318	467	gltD_gamma_fam glutamate synthase small subunit fa	95.83
PLN02253	280	xanthoxin dehydrogenase	95.83
PLN02476	278	O-methyltransferase	95.82
PRK08862	227	short chain dehydrogenase; Provisional	95.82
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.81
PRK08589	272	short chain dehydrogenase; Validated	95.81
PRK06198	260	short chain dehydrogenase; Provisional	95.81
PRK07024	257	short chain dehydrogenase; Provisional	95.81
PRK06125	259	short chain dehydrogenase; Provisional	95.79
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	95.79
PRK07453	322	protochlorophyllide oxidoreductase; Validated	95.79
PF01596	205	Methyltransf_3: O-methyltransferase; InterPro: IPR	95.78
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	95.77
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	95.77
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	95.76
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	95.76
PRK12367	245	short chain dehydrogenase; Provisional	95.74
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	95.74
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	95.74
PRK06482	276	short chain dehydrogenase; Provisional	95.74
PRK06483	236	dihydromonapterin reductase; Provisional	95.74
PRK05876	275	short chain dehydrogenase; Provisional	95.73
PRK15116	268	sulfur acceptor protein CsdL; Provisional	95.72
PRK08251	248	short chain dehydrogenase; Provisional	95.71
PRK06914	280	short chain dehydrogenase; Provisional	95.71
PRK12809	639	putative oxidoreductase Fe-S binding subunit; Revi	95.69
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	95.68
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.68
PRK06101	240	short chain dehydrogenase; Provisional	95.68
PRK06114	254	short chain dehydrogenase; Provisional	95.67
PRK07067	257	sorbitol dehydrogenase; Provisional	95.65
COG2519	256	GCD14 tRNA(1-methyladenosine) methyltransferase an	95.64
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	95.63
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	95.63
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.6
PRK12937	245	short chain dehydrogenase; Provisional	95.58
PRK06701	290	short chain dehydrogenase; Provisional	95.58
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	95.58
PRK06179	270	short chain dehydrogenase; Provisional	95.57
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	95.57
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	95.56
PRK08264	238	short chain dehydrogenase; Validated	95.56
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	95.55
PRK06720	169	hypothetical protein; Provisional	95.54
KOG0725	270	consensus Reductases with broad range of substrate	95.54
PRK07856	252	short chain dehydrogenase; Provisional	95.53
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	95.51
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	95.5
PRK05562	223	precorrin-2 dehydrogenase; Provisional	95.5
PRK04457	262	spermidine synthase; Provisional	95.49
PRK07574	385	formate dehydrogenase; Provisional	95.48
PRK08226	263	short chain dehydrogenase; Provisional	95.48
PRK12747	252	short chain dehydrogenase; Provisional	95.46
COG2910	211	Putative NADH-flavin reductase [General function p	95.45
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	95.44
PRK06124	256	gluconate 5-dehydrogenase; Provisional	95.44
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	95.41
PRK07074	257	short chain dehydrogenase; Provisional	95.41
PRK08219	227	short chain dehydrogenase; Provisional	95.41
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	95.41
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	95.38
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.37
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	95.37
PLN03139	386	formate dehydrogenase; Provisional	95.36
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	95.35
PRK06398	258	aldose dehydrogenase; Validated	95.35
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.34
PRK06484	520	short chain dehydrogenase; Validated	95.33
PRK05884	223	short chain dehydrogenase; Provisional	95.32
TIGR00477	195	tehB tellurite resistance protein TehB. Part of a	95.28
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	95.28
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.27
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	95.27
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	95.26
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	95.25
PRK07340	304	ornithine cyclodeaminase; Validated	95.24
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	95.23
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	95.23
PRK10538	248	malonic semialdehyde reductase; Provisional	95.22
PRK08317	241	hypothetical protein; Provisional	95.21
PRK12769	654	putative oxidoreductase Fe-S binding subunit; Revi	95.21
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	95.2
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	95.2
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	95.2
PRK08328	231	hypothetical protein; Provisional	95.19
PLN00203	519	glutamyl-tRNA reductase	95.18
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	95.17
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.14
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.13
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	95.13
PRK07097	265	gluconate 5-dehydrogenase; Provisional	95.13
PRK07102	243	short chain dehydrogenase; Provisional	95.13
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	95.13
PRK06849	389	hypothetical protein; Provisional	95.12
COG0569	225	TrkA K+ transport systems, NAD-binding component [	95.12
PF08704	247	GCD14: tRNA methyltransferase complex GCD14 subuni	95.11
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	95.11
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	95.11
PRK07791	286	short chain dehydrogenase; Provisional	95.1
PRK08303	305	short chain dehydrogenase; Provisional	95.09
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	95.08
PRK07775	274	short chain dehydrogenase; Provisional	95.06
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	95.06
PRK06940	275	short chain dehydrogenase; Provisional	95.05
PRK07577	234	short chain dehydrogenase; Provisional	95.01
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.98
COG1648	210	CysG Siroheme synthase (precorrin-2 oxidase/ferroc	94.94
COG0334	411	GdhA Glutamate dehydrogenase/leucine dehydrogenase	94.93
COG0421	282	SpeE Spermidine synthase [Amino acid transport and	94.91
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	94.89
COG0031	300	CysK Cysteine synthase [Amino acid transport and m	94.88
PRK06523	260	short chain dehydrogenase; Provisional	94.83
PRK01683	258	trans-aconitate 2-methyltransferase; Provisional	94.82
PRK08278	273	short chain dehydrogenase; Provisional	94.81
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	94.8
PRK12743	256	oxidoreductase; Provisional	94.79
PLN02589	247	caffeoyl-CoA O-methyltransferase	94.79
PLN02823	336	spermine synthase	94.77
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	94.76
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.72
PRK05650	270	short chain dehydrogenase; Provisional	94.71
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	94.7
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	94.69
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.69
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	94.66
PRK13243	333	glyoxylate reductase; Reviewed	94.64
PRK14103	255	trans-aconitate 2-methyltransferase; Provisional	94.63
PF01408	120	GFO_IDH_MocA: Oxidoreductase family, NAD-binding R	94.62
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.6
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.59
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	94.58
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	94.58
KOG1252	362	consensus Cystathionine beta-synthase and related	94.56
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	94.55
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	94.53
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	94.49
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	94.48
PLN03075	296	nicotianamine synthase; Provisional	94.47
PRK01581	374	speE spermidine synthase; Validated	94.45
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	94.45
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	94.45
PLN02244	340	tocopherol O-methyltransferase	94.45
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	94.44
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	94.42
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	94.41
PLN02928	347	oxidoreductase family protein	94.37
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.35
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.34
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	94.33
PRK05855	582	short chain dehydrogenase; Validated	94.32
PRK06141	314	ornithine cyclodeaminase; Validated	94.32
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.3
PF07991	165	IlvN: Acetohydroxy acid isomeroreductase, catalyti	94.3
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	94.28
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	94.26
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	94.24
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	94.24
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.23
PLN00016	378	RNA-binding protein; Provisional	94.22
PRK07417	279	arogenate dehydrogenase; Reviewed	94.2
PRK10258	251	biotin biosynthesis protein BioC; Provisional	94.19
PRK09135	249	pteridine reductase; Provisional	94.18
TIGR02415	254	23BDH acetoin reductases. One member of this famil	94.18
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	94.17
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	94.15
TIGR00138	181	gidB 16S rRNA methyltransferase GidB. GidB (glucos	94.15
PLN02256	304	arogenate dehydrogenase	94.14
PRK13255	218	thiopurine S-methyltransferase; Reviewed	94.12
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	94.09
TIGR00563	426	rsmB ribosomal RNA small subunit methyltransferase	94.07
PRK08936	261	glucose-1-dehydrogenase; Provisional	94.07
PRK12746	254	short chain dehydrogenase; Provisional	94.05
PRK07201	657	short chain dehydrogenase; Provisional	94.05
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	94.03
PRK10669	558	putative cation:proton antiport protein; Provision	94.0
PTZ00079	454	NADP-specific glutamate dehydrogenase; Provisional	93.99
PRK12938	246	acetyacetyl-CoA reductase; Provisional	93.99
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	93.95
PRK08287	187	cobalt-precorrin-6Y C(15)-methyltransferase; Valid	93.91
PF07021	193	MetW: Methionine biosynthesis protein MetW; InterP	93.9
TIGR02992	326	ectoine_eutC ectoine utilization protein EutC. Mem	93.9
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	93.89
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	93.87
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	93.85
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	93.85
PTZ00098	263	phosphoethanolamine N-methyltransferase; Provision	93.84
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	93.84
TIGR03215	285	ac_ald_DH_ac acetaldehyde dehydrogenase (acetylati	93.83
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.82
TIGR00446	264	nop2p NOL1/NOP2/sun family putative RNA methylase.	93.78
PRK08300	302	acetaldehyde dehydrogenase; Validated	93.76
PRK00121	202	trmB tRNA (guanine-N(7)-)-methyltransferase; Revie	93.75
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	93.74
PRK12480	330	D-lactate dehydrogenase; Provisional	93.74
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.74
PRK13403	335	ketol-acid reductoisomerase; Provisional	93.73
PRK03562	621	glutathione-regulated potassium-efflux system prot	93.69
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	93.67
TIGR00417	270	speE spermidine synthase. the SpeE subunit of sper	93.66
PRK07069	251	short chain dehydrogenase; Validated	93.59
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	93.57
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	93.57
PF01564	246	Spermine_synth: Spermine/spermidine synthase; Inte	93.57
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	93.55
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.55
TIGR00452	314	methyltransferase, putative. Known examples to dat	93.54

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=3.1e-64  Score=444.53  Aligned_cols=359  Identities=45%  Similarity=0.802  Sum_probs=340.8

Q ss_pred             CCccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEE
Q 017457            1 MQRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLV   80 (371)
Q Consensus         1 ~~~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V   80 (371)
                      |.++.+++|+++++++++|++|||+||+.|+++|++|.+.++|..+.+   +|.++|||.+|+|++||+.|+.+++||+|
T Consensus         7 V~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~---~P~vLGHEgAGiVe~VG~gVt~vkpGDhV   83 (366)
T COG1062           7 VAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG---FPAVLGHEGAGIVEAVGEGVTSVKPGDHV   83 (366)
T ss_pred             eeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC---CceecccccccEEEEecCCccccCCCCEE
Confidence            467889999999999999999999999999999999999999987764   99999999999999999999999999999


Q ss_pred             eeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcch
Q 017457           81 LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI  160 (371)
Q Consensus        81 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~  160 (371)
                      +..+.-.||+|++|.++.+|+|......-..|...+|+.+|- .++..++|+.+.++|++|.++++..++|++++.+++.
T Consensus        84 I~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls-~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~p~~~  162 (366)
T COG1062          84 ILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLS-GNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEK  162 (366)
T ss_pred             EEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeee-cCCcceeeeeccccchhheeecccceEECCCCCCccc
Confidence            999999999999999999999998887767888899988886 7788899999999999999999999999999999999


Q ss_pred             hhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCC
Q 017457          161 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD  240 (371)
Q Consensus       161 aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~  240 (371)
                      ++.+.|...|.+.++.+.+++++|++|.|+|.|++|++++|-|+..|+.+||+++.+++|+++++++|+++++|..+   
T Consensus       163 a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~~---  239 (366)
T COG1062         163 ACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPKE---  239 (366)
T ss_pred             eEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecchh---
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999987   


Q ss_pred             c-cHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCchh
Q 017457          241 K-TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRS  319 (371)
Q Consensus       241 ~-~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  319 (371)
                      . +.++.+.++|++|+|++|||+|+...+++++.+..++ |+.+..|........+++...+..+.++.|+.++..+.+.
T Consensus       240 ~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~-G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G~~~p~~  318 (366)
T COG1062         240 VDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRG-GTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGARPRS  318 (366)
T ss_pred             hhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcC-CeEEEEecCCCCceeecChHHeeccceEEEEeecCCcccc
Confidence            4 6999999999999999999999999999999999995 9999999877777888999998889999999999998889


Q ss_pred             hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEEe
Q 017457          320 DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM  367 (371)
Q Consensus       320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~~  367 (371)
                      ++.++++++.+|++.+.+++++.++|+|++|||+.+.+++..|-|+.|
T Consensus       319 diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~IR~Vi~~  366 (366)
T COG1062         319 DIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSIRSVIRF  366 (366)
T ss_pred             chhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCceeeEEecC
Confidence            999999999999999999999999999999999999999999877754

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.6e-63  Score=430.57  Aligned_cols=363  Identities=57%  Similarity=0.976  Sum_probs=344.2

Q ss_pred             CCccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEE
Q 017457            1 MQRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLV   80 (371)
Q Consensus         1 ~~~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V   80 (371)
                      |.++++++|.++|++.+||+.+||+||+.++++|++|.+.++|..+..  .||.++|||.+|+|+.+|+.|+++++||+|
T Consensus        12 V~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~--~fP~IlGHEaaGIVESvGegV~~vk~GD~V   89 (375)
T KOG0022|consen   12 VAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEG--LFPVILGHEAAGIVESVGEGVTTVKPGDHV   89 (375)
T ss_pred             eeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccc--cCceEecccceeEEEEecCCccccCCCCEE
Confidence            568999999999999999999999999999999999999999987665  899999999999999999999999999999


Q ss_pred             eeccCCCCCCCccccCCCCCCCCCCCCCCC-CCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcc
Q 017457           81 LPIFHRDCGECRDCKSSKSNTCSKFGRGYR-PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLG  159 (371)
Q Consensus        81 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~-~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~  159 (371)
                      +....-.|++|++|+++..|+|.+.+.... .++.++|+.+|- .+|..++||.+..+|+||.+++...++++++..+++
T Consensus        90 iplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~-~~gk~iyHfmg~StFsEYTVv~~~~v~kId~~aPl~  168 (375)
T KOG0022|consen   90 IPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFT-CKGKPIYHFMGTSTFSEYTVVDDISVAKIDPSAPLE  168 (375)
T ss_pred             eeccccCCCCcccccCCCCChhhhhcccccccccccCCceeee-eCCCceEEecccccceeEEEeecceeEecCCCCChh
Confidence            999999999999999999999999887643 556679999998 778889999999999999999999999999999999


Q ss_pred             hhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCC
Q 017457          160 IACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG  239 (371)
Q Consensus       160 ~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~  239 (371)
                      .++.+.|...|+|.++++.+.+++|+++.|+|.|++|+++++-||+.|++++|+++.+++|.+.++++|+++++|+.+ .
T Consensus       169 kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~iNp~d-~  247 (375)
T KOG0022|consen  169 KVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFINPKD-L  247 (375)
T ss_pred             heeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceecChhh-c
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999884 2


Q ss_pred             CccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCchh
Q 017457          240 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRS  319 (371)
Q Consensus       240 ~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  319 (371)
                      .....+.+++.|++|+|+.|+|+|....+.+++.+...+||.-+.+|....++..++.++.++.+.++.|+.++.++++.
T Consensus       248 ~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~Gs~FGG~K~~~  327 (375)
T KOG0022|consen  248 KKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKGSAFGGFKSKS  327 (375)
T ss_pred             cccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEEEecccccchh
Confidence            23688899999999999999999999999999999999999999999988888899999999999999999999999999


Q ss_pred             hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEEe
Q 017457          320 DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM  367 (371)
Q Consensus       320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~~  367 (371)
                      ++..+++.+.++++.+..+++|++||+++++||+.+.++++.|.|+.+
T Consensus       328 ~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~GksiR~vl~~  375 (375)
T KOG0022|consen  328 DIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSIRCVLWM  375 (375)
T ss_pred             hhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceEEEEEeC
Confidence            999999999999999999999999999999999999999999988864

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=3.1e-63  Score=448.12  Aligned_cols=327  Identities=31%  Similarity=0.483  Sum_probs=295.9

Q ss_pred             CccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEe
Q 017457            2 QRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVL   81 (371)
Q Consensus         2 ~~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~   81 (371)
                      +.+.+.++++++++.|+|+++||+|+|+|+|+|++|++.++|.++..  .+|.+||||.+|+|+++|++|+.||+||+|.
T Consensus         9 ~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~--~~P~ipGHEivG~V~~vG~~V~~~k~GDrVg   86 (339)
T COG1064           9 LKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVP--KLPLIPGHEIVGTVVEVGEGVTGLKVGDRVG   86 (339)
T ss_pred             EccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCC--CCCccCCcceEEEEEEecCCCccCCCCCEEE
Confidence            34566679999999999999999999999999999999999999888  7999999999999999999999999999998


Q ss_pred             e-ccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcch
Q 017457           82 P-IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI  160 (371)
Q Consensus        82 ~-~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~  160 (371)
                      + +...+|+.|+||++|++++|+....   .|++.+|                   +|+||+++++.+++++|+++++++
T Consensus        87 V~~~~~~Cg~C~~C~~G~E~~C~~~~~---~gy~~~G-------------------Gyaeyv~v~~~~~~~iP~~~d~~~  144 (339)
T COG1064          87 VGWLVISCGECEYCRSGNENLCPNQKI---TGYTTDG-------------------GYAEYVVVPARYVVKIPEGLDLAE  144 (339)
T ss_pred             ecCccCCCCCCccccCcccccCCCccc---cceeecC-------------------cceeEEEEchHHeEECCCCCChhh
Confidence            8 9999999999999999999999776   8888887                   999999999999999999999999


Q ss_pred             hhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCC
Q 017457          161 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD  240 (371)
Q Consensus       161 aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~  240 (371)
                      ||.+.|++.|.|++| +.++++||++|+|+|+|++|++|+|+|+++|+ +|++++++++|++.++++|++++++..+   
T Consensus       145 aApllCaGiT~y~al-k~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~~~~---  219 (339)
T COG1064         145 AAPLLCAGITTYRAL-KKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVINSSD---  219 (339)
T ss_pred             hhhhhcCeeeEeeeh-hhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEEcCC---
Confidence            999999999999976 55999999999999999999999999999998 9999999999999999999999999765   


Q ss_pred             ccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchh
Q 017457          241 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRS  319 (371)
Q Consensus       241 ~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~  319 (371)
                      ++..+.+++.    +|+++|+++ +..++.+++.|+++ |+++..|.........++.+.++. ++++.|+..++   +.
T Consensus       220 ~~~~~~~~~~----~d~ii~tv~-~~~~~~~l~~l~~~-G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~---~~  290 (339)
T COG1064         220 SDALEAVKEI----ADAIIDTVG-PATLEPSLKALRRG-GTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGT---RA  290 (339)
T ss_pred             chhhHHhHhh----CcEEEECCC-hhhHHHHHHHHhcC-CEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCC---HH
Confidence            6676666653    999999999 77799999999998 999999985323345566666555 89999998776   57


Q ss_pred             hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEeC
Q 017457          320 DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMD  368 (371)
Q Consensus       320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~~  368 (371)
                      +++++++|..+|++.+.  +.+.++++++++|++.+.+++.. |+|+++.
T Consensus       291 d~~e~l~f~~~g~Ikp~--i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~  338 (339)
T COG1064         291 DLEEALDFAAEGKIKPE--ILETIPLDEINEAYERMEKGKVRGRAVIDMS  338 (339)
T ss_pred             HHHHHHHHHHhCCceee--EEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence            89999999999977655  53699999999999999998876 9998875

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=4.2e-57  Score=395.75  Aligned_cols=338  Identities=25%  Similarity=0.414  Sum_probs=292.0

Q ss_pred             CccCCCCcEEEEEecCCC-CCCeEEEEEeEeecccccccccccCC-CCCCCCCCccccccccEEEEEeCCCCCCcCCCCE
Q 017457            2 QRIPGKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSST-DLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDL   79 (371)
Q Consensus         2 ~~~~~~~l~~~~~~~~~~-~~~eVlVkv~~~~i~~~D~~~~~g~~-~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~   79 (371)
                      ++.+..++++++.|.|++ .|+||+|++.+++||++|+|.++... ..+..+.|+++|||.+|+|.++|+.|+++|+|||
T Consensus         9 vl~g~~di~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk~LkVGDr   88 (354)
T KOG0024|consen    9 VLRGKGDIRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVKHLKVGDR   88 (354)
T ss_pred             EEEccCceeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhcccccccccCCe
Confidence            345556689999999987 99999999999999999999997544 3333368999999999999999999999999999


Q ss_pred             EeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCc
Q 017457           80 VLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP-RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPL  158 (371)
Q Consensus        80 V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~  158 (371)
                      |++-+..+|+.|++|+.|++|+|+.+.+   .+.. .+|                   ++++|+++++++++|+|+++|+
T Consensus        89 VaiEpg~~c~~cd~CK~GrYNlCp~m~f---~atpp~~G-------------------~la~y~~~~~dfc~KLPd~vs~  146 (354)
T KOG0024|consen   89 VAIEPGLPCRDCDFCKEGRYNLCPHMVF---CATPPVDG-------------------TLAEYYVHPADFCYKLPDNVSF  146 (354)
T ss_pred             EEecCCCccccchhhhCcccccCCcccc---ccCCCcCC-------------------ceEEEEEechHheeeCCCCCch
Confidence            9999999999999999999999999997   3333 444                   9999999999999999999999


Q ss_pred             chhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCC
Q 017457          159 GIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATC  238 (371)
Q Consensus       159 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~  238 (371)
                      +++|.+. ++++++|+ .+++++++|.+|||+|+|++|+++...||++|+.+|++++..++|++.++++|++.+.+....
T Consensus       147 eeGAl~e-PLsV~~HA-cr~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~  224 (354)
T KOG0024|consen  147 EEGALIE-PLSVGVHA-CRRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHK  224 (354)
T ss_pred             hhccccc-chhhhhhh-hhhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeecccc
Confidence            9999998 89999996 588999999999999999999999999999999999999999999999999999988776552


Q ss_pred             C-CccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCC
Q 017457          239 G-DKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGL  315 (371)
Q Consensus       239 ~-~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~  315 (371)
                      . .+++.+.+....+. .+|++|||+|....++.++..++.+ |++++.|.  +....+|+...... ++.+.|++-+. 
T Consensus       225 ~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~g-Gt~vlvg~--g~~~~~fpi~~v~~kE~~~~g~fry~-  300 (354)
T KOG0024|consen  225 SSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSG-GTVVLVGM--GAEEIQFPIIDVALKEVDLRGSFRYC-  300 (354)
T ss_pred             ccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccC-CEEEEecc--CCCccccChhhhhhheeeeeeeeeec-
Confidence            1 23344444444443 5999999999999899999999997 99999986  34566777776555 89999985222 


Q ss_pred             CchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCce--eeEEEEeCc
Q 017457          316 KPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS--LRCIIWMDK  369 (371)
Q Consensus       316 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~--~kvvv~~~~  369 (371)
                        +.++..+++++++|++++++++++.|+++++.+||+.+.++..  .|+++...+
T Consensus       301 --~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~~  354 (354)
T KOG0024|consen  301 --NGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGPE  354 (354)
T ss_pred             --cccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCCC
Confidence              4589999999999999999999999999999999999988764  499987653

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=9.8e-56  Score=386.12  Aligned_cols=330  Identities=26%  Similarity=0.425  Sum_probs=287.6

Q ss_pred             CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEE-eeccCC
Q 017457            8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLV-LPIFHR   86 (371)
Q Consensus         8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V-~~~~~~   86 (371)
                      ++++.+++.|+|.++||+|+|+|||||++|++.+.|.+...  .+|.++|||.+|+|+++|++|+.|++|||| +.+..-
T Consensus        23 ~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s--~~PlV~GHEiaG~VvkvGs~V~~~kiGD~vGVg~~~~  100 (360)
T KOG0023|consen   23 SPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLS--KYPLVPGHEIAGVVVKVGSNVTGFKIGDRVGVGWLNG  100 (360)
T ss_pred             CcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcc--cCCccCCceeeEEEEEECCCcccccccCeeeeeEEec
Confidence            45668999999999999999999999999999999999886  899999999999999999999999999999 667778


Q ss_pred             CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcccc
Q 017457           87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC  166 (371)
Q Consensus        87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~  166 (371)
                      +|+.|+||+.+.+++|++.-.. ..|+..+|              +-.+|+||+|+++++.+++++|+++++++||.+.|
T Consensus       101 sC~~CE~C~~~~E~yCpk~~~t-~~g~~~DG--------------t~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAPlLC  165 (360)
T KOG0023|consen  101 SCLSCEYCKSGNENYCPKMHFT-YNGVYHDG--------------TITQGGFQEYAVVDEVFAIKIPENLPLASAAPLLC  165 (360)
T ss_pred             cccCccccccCCcccCCceeEe-ccccccCC--------------CCccCccceeEEEeeeeEEECCCCCChhhccchhh
Confidence            8999999999999999953321 26677777              33347899999999999999999999999999999


Q ss_pred             chhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh-hHHHHHHHhCcceEEcCCCCCCccHHH
Q 017457          167 GVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP-EKFEIGKKFGITDFINPATCGDKTVSQ  245 (371)
Q Consensus       167 ~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~-~~~~~~~~lga~~v~~~~~~~~~~~~~  245 (371)
                      ++.|.|..| ...++.||+++-|.|+|++|++++|+||++|+ +|++++++. .|.+.++.||++.+++..+  ++++.+
T Consensus       166 aGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~LGAd~fv~~~~--d~d~~~  241 (360)
T KOG0023|consen  166 AGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSLGADVFVDSTE--DPDIMK  241 (360)
T ss_pred             cceEEeehh-HHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhcCcceeEEecC--CHHHHH
Confidence            999999965 56788899999999997799999999999999 999999988 4555567799999888763  388999


Q ss_pred             HHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhhHHHH
Q 017457          246 VIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATL  324 (371)
Q Consensus       246 ~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~  324 (371)
                      .+.+.+++++|-|.+.  ....++.++..++.+ |++|++|....  ...++.+++.- .+++.|+..+.   +.+.+++
T Consensus       242 ~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~-Gt~V~vg~p~~--~~~~~~~~lil~~~~I~GS~vG~---~ket~E~  313 (360)
T KOG0023|consen  242 AIMKTTDGGIDTVSNL--AEHALEPLLGLLKVN-GTLVLVGLPEK--PLKLDTFPLILGRKSIKGSIVGS---RKETQEA  313 (360)
T ss_pred             HHHHhhcCcceeeeec--cccchHHHHHHhhcC-CEEEEEeCcCC--cccccchhhhcccEEEEeecccc---HHHHHHH
Confidence            9999988888888876  344489999999998 99999998543  56666666655 78999998777   5689999


Q ss_pred             HHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEeCc
Q 017457          325 AQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDK  369 (371)
Q Consensus       325 ~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~~~  369 (371)
                      +++..++.+...  + +..+++++++||+.+.++... |.++++..
T Consensus       314 Ldf~a~~~ik~~--I-E~v~~~~v~~a~erm~kgdV~yRfVvD~s~  356 (360)
T KOG0023|consen  314 LDFVARGLIKSP--I-ELVKLSEVNEAYERMEKGDVRYRFVVDVSK  356 (360)
T ss_pred             HHHHHcCCCcCc--e-EEEehhHHHHHHHHHHhcCeeEEEEEEccc
Confidence            999999977655  6 999999999999999998876 99998864

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=2.4e-52  Score=396.07  Aligned_cols=361  Identities=45%  Similarity=0.828  Sum_probs=293.8

Q ss_pred             ccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEee
Q 017457            3 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP   82 (371)
Q Consensus         3 ~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~   82 (371)
                      ..+++.++++++|.|+|.++||+|||.++++|++|++.+.|.++..  .+|.++|||++|+|+++|+.+++|++||+|++
T Consensus         8 ~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~--~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~   85 (368)
T TIGR02818         8 WAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEG--VFPVILGHEGAGIVEAVGEGVTSVKVGDHVIP   85 (368)
T ss_pred             ecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCC--CCCeeeccccEEEEEEECCCCccCCCCCEEEE
Confidence            3456679999999999999999999999999999999998876544  67899999999999999999999999999999


Q ss_pred             ccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhh
Q 017457           83 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC  162 (371)
Q Consensus        83 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa  162 (371)
                      .+...||.|.+|..+.+++|.........|+..+|..++.. .|....++.+.|+|+||+.++++.++++|+++++++++
T Consensus        86 ~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~-~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~~~aa  164 (368)
T TIGR02818        86 LYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSK-DGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVC  164 (368)
T ss_pred             cCCCCCCCChhhhCCCcccccCcccccccccccCCcccccc-CCCcccccccCccceeeEEechhheEECCCCCCHHHhh
Confidence            98899999999999999999864421112333332111110 01111122234699999999999999999999999999


Q ss_pred             ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457          163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT  242 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~  242 (371)
                      .+++++.|||+++....++++|++|||+|+|++|++++|+||++|+++|+++++++++++.++++|+++++++.+ .+.+
T Consensus       165 ~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~-~~~~  243 (368)
T TIGR02818       165 LLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPND-YDKP  243 (368)
T ss_pred             hhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEcccc-cchh
Confidence            999999999998777889999999999999999999999999999967999999999999999999999998653 1135


Q ss_pred             HHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCchhhHH
Q 017457          243 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIA  322 (371)
Q Consensus       243 ~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  322 (371)
                      +.+.+++++++++|++||++|++..+..+++++++++|+++.+|.........+....++.+..+.|+.........++.
T Consensus       244 ~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  323 (368)
T TIGR02818       244 IQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVTGRVWRGSAFGGVKGRTELP  323 (368)
T ss_pred             HHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhccceEEEeeccCCCcHHHHH
Confidence            66778888877899999999987778999999977339999999743223344444444445567776544433356789


Q ss_pred             HHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEEe
Q 017457          323 TLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM  367 (371)
Q Consensus       323 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~~  367 (371)
                      +++++++++++++.++++++|+|+++++|++.+.+++..|+++.+
T Consensus       324 ~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~k~~v~~  368 (368)
T TIGR02818       324 GIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKSIRTVIHY  368 (368)
T ss_pred             HHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCceeEEeeC
Confidence            999999999998888899999999999999999887767999875

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=7.1e-52  Score=393.48  Aligned_cols=351  Identities=36%  Similarity=0.669  Sum_probs=292.5

Q ss_pred             CCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccC
Q 017457            6 GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH   85 (371)
Q Consensus         6 ~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~   85 (371)
                      .+.++++++|.|+|+++||+|||.+++||++|++.+.|.++.   .+|.++|||++|+|+++|++++++++||+|++.+.
T Consensus        18 ~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~~---~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~   94 (371)
T cd08281          18 SRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPR---PLPMALGHEAAGVVVEVGEGVTDLEVGDHVVLVFV   94 (371)
T ss_pred             CCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCCC---CCCccCCccceeEEEEeCCCCCcCCCCCEEEEccC
Confidence            356999999999999999999999999999999999887532   57889999999999999999999999999998888


Q ss_pred             CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccc
Q 017457           86 RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLS  165 (371)
Q Consensus        86 ~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~  165 (371)
                      ..|+.|++|+.+.++.|.....-...|...+|..++...++... +..+.|+|+||+.+++++++++|+++++++++.++
T Consensus        95 ~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~-~~~g~G~~aey~~v~~~~~~~lP~~l~~~~aa~~~  173 (371)
T cd08281          95 PSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEIN-HHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFG  173 (371)
T ss_pred             CCCCCCccccCCCcccccCccccccccccccCcccccccCcccc-cccCcccceeeEEecccceEECCCCCChHHhhhhc
Confidence            89999999999999999765321111221221111111111110 11223699999999999999999999999999999


Q ss_pred             cchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHH
Q 017457          166 CGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQ  245 (371)
Q Consensus       166 ~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~  245 (371)
                      +++.|||+++....++++|++|||.|+|++|++++|+|+++|+++|++++++++|++.++++|+++++++.+   +++.+
T Consensus       174 ~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~---~~~~~  250 (371)
T cd08281         174 CAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNAGD---PNAVE  250 (371)
T ss_pred             chHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCceEeCCCc---hhHHH
Confidence            999999998777888999999999999999999999999999966999999999999999999999999877   77888


Q ss_pred             HHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhhHHHH
Q 017457          246 VIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATL  324 (371)
Q Consensus       246 ~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~  324 (371)
                      .+++++++++|++|||+|....+..++++++++ |+++.+|.........++...++. ++++.|+....+...+++.++
T Consensus       251 ~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~  329 (371)
T cd08281         251 QVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSVPALSLVAEERTLKGSYMGSCVPRRDIPRY  329 (371)
T ss_pred             HHHHHhCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEccCCCCceeeecHHHHhhcCCEEEEEecCCCChHHHHHHH
Confidence            888888778999999999877789999999998 999999974332345666666655 899999876655445678999


Q ss_pred             HHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEE
Q 017457          325 AQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCI  364 (371)
Q Consensus       325 ~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvv  364 (371)
                      ++++++|++.+.++++++|+|+|+++||+.+.+++..|.+
T Consensus       330 ~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~v  369 (371)
T cd08281         330 LALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQV  369 (371)
T ss_pred             HHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeee
Confidence            9999999998888899999999999999999988777443

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=1.2e-51  Score=391.58  Aligned_cols=360  Identities=51%  Similarity=0.863  Sum_probs=294.9

Q ss_pred             ccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEee
Q 017457            3 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP   82 (371)
Q Consensus         3 ~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~   82 (371)
                      ..+++++++++.|.|+|.++||+|||+++++|++|++.+.|.++..  .+|.++|||++|+|+++|+++++|++||+|++
T Consensus         9 ~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~--~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~   86 (368)
T cd08300           9 WEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEG--LFPVILGHEGAGIVESVGEGVTSVKPGDHVIP   86 (368)
T ss_pred             ecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccC--CCCceeccceeEEEEEeCCCCccCCCCCEEEE
Confidence            4456679999999999999999999999999999999998876544  68899999999999999999999999999999


Q ss_pred             ccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhh
Q 017457           83 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC  162 (371)
Q Consensus        83 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa  162 (371)
                      .+..+|++|++|..+.++.|.........|...+|..+++.. |....++.+.|+|+||+.++++.++++|+++++.+++
T Consensus        87 ~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~-g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa  165 (368)
T cd08300          87 LYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCK-GKPIYHFMGTSTFSEYTVVAEISVAKINPEAPLDKVC  165 (368)
T ss_pred             cCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccC-CcccccccccccceeEEEEchhceEeCCCCCChhhhh
Confidence            989999999999999999998654211123333331111111 1111122234699999999999999999999999999


Q ss_pred             ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457          163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT  242 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~  242 (371)
                      .+++++.|||+++....++++|++|||+|+|++|++++|+|+++|+++|+++++++++++.++++|+++++++++ .+++
T Consensus       166 ~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~-~~~~  244 (368)
T cd08300         166 LLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKD-HDKP  244 (368)
T ss_pred             hhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccc-cchH
Confidence            999999999998777788999999999999999999999999999967999999999999999999999998765 1125


Q ss_pred             HHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCchhhHH
Q 017457          243 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIA  322 (371)
Q Consensus       243 ~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  322 (371)
                      +.+.+.+++++++|+|||++|+...+..+++++++++|+++.+|.........++...+..+.++.++....+...+++.
T Consensus       245 ~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  324 (368)
T cd08300         245 IQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRVWKGTAFGGWKSRSQVP  324 (368)
T ss_pred             HHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhhcCeEEEEEecccCcHHHHH
Confidence            77888888877999999999987668999999977339999999743222334444444445677777666555567889


Q ss_pred             HHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEE
Q 017457          323 TLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIW  366 (371)
Q Consensus       323 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~  366 (371)
                      +++++++++++.+.++++++|+|+++++||+.+.+++..|++++
T Consensus       325 ~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~~k~~~~  368 (368)
T cd08300         325 KLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKSIRTVVK  368 (368)
T ss_pred             HHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCCceeeeC
Confidence            99999999999888888999999999999999988877798874

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=1.6e-51  Score=392.15  Aligned_cols=359  Identities=55%  Similarity=0.963  Sum_probs=293.1

Q ss_pred             cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457            4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI   83 (371)
Q Consensus         4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~   83 (371)
                      .+++++.++++|.|+|.++||+|||++++||++|++.+.|.+.... .+|.++|||++|+|+++|++++.|++||+|++.
T Consensus        18 ~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~-~~p~i~GhE~~G~V~~vG~~v~~~~vGdrV~~~   96 (381)
T PLN02740         18 GPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQR-AYPRILGHEAAGIVESVGEGVEDLKAGDHVIPI   96 (381)
T ss_pred             cCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccC-CCCccccccceEEEEEeCCCCCcCCCCCEEEec
Confidence            3455688899999999999999999999999999999988754222 578999999999999999999999999999999


Q ss_pred             cCCCCCCCccccCCCCCCCCCCCCCCCCCCC----CCCCccccccC-CceeecccCcccccceeeeecceeEECCCCCCc
Q 017457           84 FHRDCGECRDCKSSKSNTCSKFGRGYRPNMP----RDGTSRFRELK-GDVIHHFLNISSFTEYSVVDITHVVKITPHIPL  158 (371)
Q Consensus        84 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~----~~g~~~~~~~~-~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~  158 (371)
                      +...|+.|++|..+.+++|.....   .++.    ..|...+...+ +....++...|+|+||+.++.+.++++|+++++
T Consensus        97 ~~~~cg~C~~c~~g~~~~C~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~  173 (381)
T PLN02740         97 FNGECGDCRYCKRDKTNLCETYRV---DPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKIDPNAPL  173 (381)
T ss_pred             CCCCCCCChhhcCCCcccccCccc---cccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeEECCCCCCH
Confidence            999999999999999999987542   1110    00000000000 000011222469999999999999999999999


Q ss_pred             chhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCC
Q 017457          159 GIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATC  238 (371)
Q Consensus       159 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~  238 (371)
                      ++++.+++++.|||+++.+..++++|++|||+|+|++|++++|+|+++|+++|+++++++++++.++++|+++++++++ 
T Consensus       174 ~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~-  252 (381)
T PLN02740        174 KKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDFINPKD-  252 (381)
T ss_pred             HHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCcEEEeccc-
Confidence            9999999999999998777889999999999999999999999999999966999999999999999999999998765 


Q ss_pred             CCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCch
Q 017457          239 GDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPR  318 (371)
Q Consensus       239 ~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  318 (371)
                      .+.++.+.+++++++++|++||++|+...+..+++++++++|+++.+|.........++...+++++++.|+....+...
T Consensus       253 ~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~  332 (381)
T PLN02740        253 SDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSITGSVFGDFKGK  332 (381)
T ss_pred             ccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCeEEEEecCCCCcH
Confidence            11247778888887689999999998777899999998833999999975433234455444556889999877665545


Q ss_pred             hhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEEe
Q 017457          319 SDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM  367 (371)
Q Consensus       319 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~~  367 (371)
                      .++.++++++.++++++.++++++|+|+|+++|++.+.+++..|++|+.
T Consensus       333 ~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~~k~~~~~  381 (381)
T PLN02740        333 SQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKALRCLLHL  381 (381)
T ss_pred             HHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCceeEEEeC
Confidence            6789999999999998888889999999999999999988777999863

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=7.6e-51  Score=384.70  Aligned_cols=346  Identities=33%  Similarity=0.590  Sum_probs=290.7

Q ss_pred             cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457            4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI   83 (371)
Q Consensus         4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~   83 (371)
                      +++.+++++++|.|+|+++||+|||.++++|++|++.+.|..+.   .+|.++|||++|+|+++|+++++|++||+|++.
T Consensus         9 ~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~~---~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~   85 (358)
T TIGR03451         9 SKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIND---EFPFLLGHEAAGVVEAVGEGVTDVAPGDYVVLN   85 (358)
T ss_pred             cCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCccc---cCCcccccceEEEEEEeCCCCcccCCCCEEEEc
Confidence            45556899999999999999999999999999999999886532   578899999999999999999999999999999


Q ss_pred             cCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhh
Q 017457           84 FHRDCGECRDCKSSKSNTCSKFGRGYRPNMP-RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC  162 (371)
Q Consensus        84 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa  162 (371)
                      +...|+.|++|..+++++|...... ...+. .+|.         ..+.....|+|+||+.++++.++++|+++++++++
T Consensus        86 ~~~~cg~c~~c~~g~~~~c~~~~~~-~~~~~~~~g~---------~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa  155 (358)
T TIGR03451        86 WRAVCGQCRACKRGRPWYCFDTHNA-TQKMTLTDGT---------ELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAG  155 (358)
T ss_pred             cCCCCCCChHHhCcCcccCcCcccc-ccccccccCc---------ccccccccccccceEEEehhheEECCCCCChhHhh
Confidence            9999999999999999999753210 00000 0010         00000123699999999999999999999999999


Q ss_pred             ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457          163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT  242 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~  242 (371)
                      .+++.+.+||+++....++++|++|||+|+|++|++++|+|+++|+++|+++++++++++.++++|+++++++.+   ++
T Consensus       156 ~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~---~~  232 (358)
T TIGR03451       156 LLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSG---TD  232 (358)
T ss_pred             hhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCC---cC
Confidence            999999999988777788999999999999999999999999999966999999999999999999999999877   67


Q ss_pred             HHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhh
Q 017457          243 VSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSD  320 (371)
Q Consensus       243 ~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~  320 (371)
                      +.+.+.+++++ ++|++||++|++..+..++++++++ |+++.+|........+++...++. +.++.++........++
T Consensus       233 ~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  311 (358)
T TIGR03451       233 PVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLPERD  311 (358)
T ss_pred             HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCcHHH
Confidence            88889888887 8999999999876689999999998 999999975333335566655555 78888886543334567


Q ss_pred             HHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEE
Q 017457          321 IATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIW  366 (371)
Q Consensus       321 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~  366 (371)
                      ++++++++++|++.+.++++++|+|+++++|++.+.+++..|+++.
T Consensus       312 ~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~~  357 (358)
T TIGR03451       312 FPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVLRSVVE  357 (358)
T ss_pred             HHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcceeEEe
Confidence            8999999999999888888999999999999999988877788765

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=1.5e-50  Score=380.14  Aligned_cols=333  Identities=28%  Similarity=0.459  Sum_probs=284.2

Q ss_pred             ccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEee
Q 017457            3 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP   82 (371)
Q Consensus         3 ~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~   82 (371)
                      +.+.+.++++++|.|+|+++||+||+.++++|++|++.+.+.+... ..+|.++|||++|+|+++|++++++++||+|++
T Consensus         6 ~~~~~~l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~   84 (339)
T cd08239           6 FPGDRTVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAP-AYQGVIPGHEPAGVVVAVGPGVTHFRVGDRVMV   84 (339)
T ss_pred             EecCCceEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCcc-CCCCceeccCceEEEEEECCCCccCCCCCEEEE
Confidence            4455679999999999999999999999999999999887764322 146789999999999999999999999999999


Q ss_pred             ccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhh
Q 017457           83 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC  162 (371)
Q Consensus        83 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa  162 (371)
                      .+...|++|++|..+++++|.....  ..|...+|                   +|++|+.+++++++++|+++++++++
T Consensus        85 ~~~~~c~~c~~c~~g~~~~c~~~~~--~~g~~~~G-------------------~~ae~~~v~~~~~~~~P~~~~~~~aa  143 (339)
T cd08239          85 YHYVGCGACRNCRRGWMQLCTSKRA--AYGWNRDG-------------------GHAEYMLVPEKTLIPLPDDLSFADGA  143 (339)
T ss_pred             CCCCCCCCChhhhCcCcccCcCccc--ccccCCCC-------------------cceeEEEechHHeEECCCCCCHHHhh
Confidence            9999999999999999999976542  13333344                   99999999999999999999999999


Q ss_pred             ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457          163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT  242 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~  242 (371)
                      .+++++.|||+++ ...++++|++|||+|+|++|++++|+|+++|+++|+++++++++++.++++|+++++++++   .+
T Consensus       144 ~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~---~~  219 (339)
T cd08239         144 LLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQ---DD  219 (339)
T ss_pred             hhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCc---ch
Confidence            9999999999976 5678899999999999999999999999999944999999999999999999999999876   45


Q ss_pred             HHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCchhhH
Q 017457          243 VSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDI  321 (371)
Q Consensus       243 ~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  321 (371)
                       .+.+.+++++ ++|++||++|+...+..++++++++ |+++.+|.... .........+.+++++.|+....   .+++
T Consensus       220 -~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~---~~~~  293 (339)
T cd08239         220 -VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPW-GRLVLVGEGGE-LTIEVSNDLIRKQRTLIGSWYFS---VPDM  293 (339)
T ss_pred             -HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcCCCC-cccCcHHHHHhCCCEEEEEecCC---HHHH
Confidence             6677788877 8999999999988678899999998 99999997432 22222122233488999986543   4678


Q ss_pred             HHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEEe
Q 017457          322 ATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM  367 (371)
Q Consensus       322 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~~  367 (371)
                      +++++++.+|++.+.++++++|+++++++||+.+.++..+|+++.+
T Consensus       294 ~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~gKvvi~~  339 (339)
T cd08239         294 EECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGESGKVVFVF  339 (339)
T ss_pred             HHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCCceEEEEeC
Confidence            9999999999998888899999999999999999887766998864

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=2.2e-50  Score=383.13  Aligned_cols=358  Identities=56%  Similarity=0.962  Sum_probs=295.4

Q ss_pred             ccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEee
Q 017457            3 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP   82 (371)
Q Consensus         3 ~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~   82 (371)
                      .+++.+++++++|.|+|+++||+|||.+++||++|++.+.|..+..  .+|.++|||++|+|+++|+++++|++||+|++
T Consensus         9 ~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~--~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~   86 (369)
T cd08301           9 WEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTP--LFPRILGHEAAGIVESVGEGVTDLKPGDHVLP   86 (369)
T ss_pred             ecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCC--CCCcccccccceEEEEeCCCCCccccCCEEEE
Confidence            4456679999999999999999999999999999999998876543  67899999999999999999999999999999


Q ss_pred             ccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCC-CccccccCCceeecccCcccccceeeeecceeEECCCCCCcchh
Q 017457           83 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDG-TSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA  161 (371)
Q Consensus        83 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g-~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~a  161 (371)
                      .+...|++|++|..+.++.|.........|....+ -.++. ..|....++...|+|+||+.++++.++++|++++++++
T Consensus        87 ~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~-~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~a  165 (369)
T cd08301          87 VFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFS-INGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAPLDKV  165 (369)
T ss_pred             ccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccc-cCCcceeeeeccccceeEEEEecccEEECCCCCCHHHh
Confidence            99999999999999999999875421111211100 00000 00111122223468999999999999999999999999


Q ss_pred             hccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCc
Q 017457          162 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK  241 (371)
Q Consensus       162 a~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~  241 (371)
                      +.+++++.|||+++....++++|++|||+|+|++|++++|+|+++|+.+|+++++++++++.++++|++.++++.+. +.
T Consensus       166 a~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~-~~  244 (369)
T cd08301         166 CLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPKDH-DK  244 (369)
T ss_pred             hhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEccccc-ch
Confidence            99999999999988888899999999999999999999999999998679999999999999999999999886541 12


Q ss_pred             cHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhc-CCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCchhh
Q 017457          242 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSRE-GWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSD  320 (371)
Q Consensus       242 ~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~-~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  320 (371)
                      .+.+.+++++++++|++||++|+...+..+++++++ + |+++.+|........+++...+++++++.|+....+..+.+
T Consensus       245 ~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~  323 (369)
T cd08301         245 PVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGW-GVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTLFGGYKPKTD  323 (369)
T ss_pred             hHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCC-CEEEEECcCCCCcccccCHHHHhcCCeEEEEecCCCChHHH
Confidence            466777777777899999999987768899999999 5 89999997543334555555556689999987766655567


Q ss_pred             HHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEE
Q 017457          321 IATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII  365 (371)
Q Consensus       321 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv  365 (371)
                      ++++++++.++++++.++++++|+|+++++||+.+.+++..|+++
T Consensus       324 ~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~  368 (369)
T cd08301         324 LPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECLRCIL  368 (369)
T ss_pred             HHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCceeEEe
Confidence            899999999999888888889999999999999999988778886

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=8.8e-50  Score=379.33  Aligned_cols=357  Identities=52%  Similarity=0.915  Sum_probs=286.7

Q ss_pred             cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457            4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI   83 (371)
Q Consensus         4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~   83 (371)
                      .+++.++++++|.|+|+++||+|||.++++|++|++.+.+..     .+|.++|||++|+|+++|+++++|++||+|++.
T Consensus        20 ~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~-----~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~   94 (378)
T PLN02827         20 GAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA-----LFPRIFGHEASGIVESIGEGVTEFEKGDHVLTV   94 (378)
T ss_pred             cCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC-----CCCeeecccceEEEEEcCCCCcccCCCCEEEEe
Confidence            445568999999999999999999999999999999887642     467899999999999999999999999999999


Q ss_pred             cCCCCCCCccccCCCCCCCCCCCCCCCCCCCC-CCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhh
Q 017457           84 FHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR-DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC  162 (371)
Q Consensus        84 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~-~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa  162 (371)
                      +...|+.|++|..+.++.|....... .|... ++...+. ..|....++...|+|+||+.++++.++++|+++++++++
T Consensus        95 ~~~~cg~C~~C~~g~~~~C~~~~~~~-~~~~~~~~~~~~~-~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l~~~~aa  172 (378)
T PLN02827         95 FTGECGSCRHCISGKSNMCQVLGLER-KGVMHSDQKTRFS-IKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKIC  172 (378)
T ss_pred             cCCCCCCChhhhCcCcccccCccccc-cccccCCCccccc-ccCcccccccccccceeeEEechhheEECCCCCCHHHhh
Confidence            99999999999999999997643210 01000 0000000 000000001123699999999999999999999999999


Q ss_pred             ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457          163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT  242 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~  242 (371)
                      .+++++.++|++++...++++|++|||+|+|++|++++|+|+++|+.+|+++++++++++.++++|+++++++++ .+++
T Consensus       173 ~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~~~-~~~~  251 (378)
T PLN02827        173 LLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINPND-LSEP  251 (378)
T ss_pred             hhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEcccc-cchH
Confidence            999899999987777788999999999999999999999999999966888888999999999999999998764 1135


Q ss_pred             HHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCchhhHH
Q 017457          243 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIA  322 (371)
Q Consensus       243 ~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  322 (371)
                      +.+.+++++++++|++||++|....+..+++.++++.|+++.+|..............+++++++.|+....+....++.
T Consensus       252 ~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~  331 (378)
T PLN02827        252 IQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLFGGWKPKSDLP  331 (378)
T ss_pred             HHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeeecCCCchhhhHH
Confidence            77778888877899999999987668999999988339999999753322222212234458999998766554456788


Q ss_pred             HHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEEeC
Q 017457          323 TLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWMD  368 (371)
Q Consensus       323 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~~~  368 (371)
                      ++++++++|++.+.++++++|+|+++++|++.+.+++..|+||.+.
T Consensus       332 ~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~~k~vi~~~  377 (378)
T PLN02827        332 SLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKCLRCVIHMP  377 (378)
T ss_pred             HHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCceEEEEEec
Confidence            9999999999988778999999999999999999887779998874

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=1.8e-49  Score=376.16  Aligned_cols=356  Identities=53%  Similarity=0.928  Sum_probs=293.2

Q ss_pred             ccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEee
Q 017457            3 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP   82 (371)
Q Consensus         3 ~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~   82 (371)
                      ...++.++++++|.|+|.++||+|||.++++|++|++.+.|..+ .  .+|.++|||++|+|+++|++++++++||+|++
T Consensus         9 ~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~--~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~   85 (365)
T cd08277           9 WEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-T--LFPVILGHEGAGIVESVGEGVTNLKPGDKVIP   85 (365)
T ss_pred             ccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-C--CCCeecccceeEEEEeeCCCCccCCCCCEEEE
Confidence            34556689999999999999999999999999999999988654 2  67899999999999999999999999999999


Q ss_pred             ccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhh
Q 017457           83 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC  162 (371)
Q Consensus        83 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa  162 (371)
                      .+...|++|.+|..+.++.|...... ..|+..++..++.. .|....++...|+|+||+.++.++++++|+++++++++
T Consensus        86 ~~~~~c~~c~~c~~g~~~~c~~~~~~-~~g~~~~~~~~~~~-~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~~~~aa  163 (365)
T cd08277          86 LFIGQCGECSNCRSGKTNLCQKYRAN-ESGLMPDGTSRFTC-KGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVC  163 (365)
T ss_pred             CCCCCCCCCchhcCcCcccCcCcccc-ccccccCCcccccc-CCcccccccccccceeeEEEchhheEECCCCCCHHHhh
Confidence            98999999999999999999875431 12332322111110 01111122234699999999999999999999999999


Q ss_pred             ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457          163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT  242 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~  242 (371)
                      .+++++.|||+++....++++|++|||+|+|++|++++|+|+++|+.+|+++++++++++.++++|++++++..+ .+.+
T Consensus       164 ~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~~-~~~~  242 (365)
T cd08277         164 LLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKD-SDKP  242 (365)
T ss_pred             HhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEecccc-ccch
Confidence            999999999998777888999999999999999999999999999967999999999999999999999998765 1123


Q ss_pred             HHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCchhhHH
Q 017457          243 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIA  322 (371)
Q Consensus       243 ~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  322 (371)
                      +.+.+++++++++|++||++|+...+..++++++++.|+++.+|... +...+++...++.++++.|+..+.+....+++
T Consensus       243 ~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~  321 (365)
T cd08277         243 VSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPP-GAELSIRPFQLILGRTWKGSFFGGFKSRSDVP  321 (365)
T ss_pred             HHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCC-ccccccCHhHHhhCCEEEeeecCCCChHHHHH
Confidence            56777777777899999999987768999999977229999999743 22334555555558899998777665456789


Q ss_pred             HHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEE
Q 017457          323 TLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII  365 (371)
Q Consensus       323 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv  365 (371)
                      +++++++++.+.+.++++++|+|+|+++|++.+.+++..|+++
T Consensus       322 ~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~i  364 (365)
T cd08277         322 KLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGECIRTVI  364 (365)
T ss_pred             HHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCCceEee
Confidence            9999999999888888999999999999999998887668876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-49  Score=373.63  Aligned_cols=332  Identities=20%  Similarity=0.316  Sum_probs=270.3

Q ss_pred             CccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccc-cCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEE
Q 017457            2 QRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWK-SSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLV   80 (371)
Q Consensus         2 ~~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~-g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V   80 (371)
                      ++.+.+.++++++|.| +.++||||||.+++||++|+++++ |........+|.++|||++|+|+++  ++++|++||+|
T Consensus         9 ~~~~~~~~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~~~vGdrV   85 (343)
T PRK09880          9 VVAGKKDVAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSGLKEGQTV   85 (343)
T ss_pred             EEecCCceEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCccCCCCCEE
Confidence            3456667999999986 689999999999999999999875 4432221267899999999999999  68899999999


Q ss_pred             eeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcch
Q 017457           81 LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI  160 (371)
Q Consensus        81 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~  160 (371)
                      ++.+...|++|++|..+.++.|.....   +|.....              ....|+|+||++++++.++++|+++++++
T Consensus        86 ~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~~~~--------------~~~~G~~aey~~v~~~~~~~~P~~l~~~~  148 (343)
T PRK09880         86 AINPSKPCGHCKYCLSHNENQCTTMRF---FGSAMYF--------------PHVDGGFTRYKVVDTAQCIPYPEKADEKV  148 (343)
T ss_pred             EECCCCCCcCChhhcCCChhhCCCcce---eeccccc--------------CCCCCceeeeEEechHHeEECCCCCCHHH
Confidence            999999999999999999999987553   2321000              00125999999999999999999999977


Q ss_pred             hhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCC
Q 017457          161 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD  240 (371)
Q Consensus       161 aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~  240 (371)
                      ++.. .++++||+++ ......+|++|||+|+|++|++++|+|+++|+++|+++++++++++.++++|+++++++++   
T Consensus       149 aa~~-~~~~~a~~al-~~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~---  223 (343)
T PRK09880        149 MAFA-EPLAVAIHAA-HQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQN---  223 (343)
T ss_pred             HHhh-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCc---
Confidence            6644 4788999976 4456678999999999999999999999999977999999999999999999999998876   


Q ss_pred             ccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchh
Q 017457          241 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRS  319 (371)
Q Consensus       241 ~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~  319 (371)
                      .++.+ +.+. .+++|++||++|++..+..++++++++ |+++.+|....  ..+++...++. ++++.|+...    .+
T Consensus       224 ~~~~~-~~~~-~g~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~k~~~i~g~~~~----~~  294 (343)
T PRK09880        224 DDLDH-YKAE-KGYFDVSFEVSGHPSSINTCLEVTRAK-GVMVQVGMGGA--PPEFPMMTLIVKEISLKGSFRF----TE  294 (343)
T ss_pred             ccHHH-Hhcc-CCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC--CCccCHHHHHhCCcEEEEEeec----cc
Confidence            44433 2222 236999999999876689999999998 99999996432  24555555554 8899987532    35


Q ss_pred             hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCce-eeEEEEe
Q 017457          320 DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS-LRCIIWM  367 (371)
Q Consensus       320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvv~~  367 (371)
                      +++++++++++|++.+.++++++|+|+++++|++.+.++.. +|+++.+
T Consensus       295 ~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  343 (343)
T PRK09880        295 EFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF  343 (343)
T ss_pred             cHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence            78999999999999888888999999999999999988765 4998864

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=1.6e-48  Score=360.76  Aligned_cols=305  Identities=25%  Similarity=0.348  Sum_probs=257.4

Q ss_pred             CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457            8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD   87 (371)
Q Consensus         8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~   87 (371)
                      .++++|+|.|.|.++||||||+|+++|+.|.+.++|...... .+|+++|.|++|+|+++|++|+.|++||+|+....  
T Consensus        14 ~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~-~~P~i~G~d~aG~V~avG~~V~~~~~GdrV~~~~~--   90 (326)
T COG0604          14 VLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVR-PLPFIPGSEAAGVVVAVGSGVTGFKVGDRVAALGG--   90 (326)
T ss_pred             eeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCC-CCCCcccceeEEEEEEeCCCCCCcCCCCEEEEccC--
Confidence            488999999999999999999999999999999999732221 69999999999999999999999999999977530  


Q ss_pred             CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccc
Q 017457           88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG  167 (371)
Q Consensus        88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~  167 (371)
                                             .+  .+                   |+|+||+.+|++.++++|+++|+++||+++++
T Consensus        91 -----------------------~~--~~-------------------G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~  126 (326)
T COG0604          91 -----------------------VG--RD-------------------GGYAEYVVVPADWLVPLPDGLSFEEAAALPLA  126 (326)
T ss_pred             -----------------------CC--CC-------------------CcceeEEEecHHHceeCCCCCCHHHHHHHHHH
Confidence                                   00  22                   49999999999999999999999999999999


Q ss_pred             hhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHH
Q 017457          168 VSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV  246 (371)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~  246 (371)
                      ++|||+++....++++|++|||+|+ |++|++++||||++|+ +++++.+++++.++++++|+++++++++   .++.+.
T Consensus       127 ~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~y~~---~~~~~~  202 (326)
T COG0604         127 GLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVINYRE---EDFVEQ  202 (326)
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEcCCc---ccHHHH
Confidence            9999999988899999999999986 9999999999999998 7777777888888999999999999988   789999


Q ss_pred             HHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCC--C-chhhH
Q 017457          247 IKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGL--K-PRSDI  321 (371)
Q Consensus       247 i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~--~-~~~~~  321 (371)
                      +++++++ ++|+|+|++|+.. +..++++++++ |+++.+|...+.....++...++. .++..|......  . ..+.+
T Consensus       203 v~~~t~g~gvDvv~D~vG~~~-~~~~l~~l~~~-G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  280 (326)
T COG0604         203 VRELTGGKGVDVVLDTVGGDT-FAASLAALAPG-GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEAL  280 (326)
T ss_pred             HHHHcCCCCceEEEECCCHHH-HHHHHHHhccC-CEEEEEecCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHH
Confidence            9999999 9999999999988 88899999998 999999985433445556555554 677777754433  1 23567


Q ss_pred             HHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcC-c-eeeEEEEe
Q 017457          322 ATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEG-K-SLRCIIWM  367 (371)
Q Consensus       322 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~-~-~~kvvv~~  367 (371)
                      +++++++++|++.+  .++.+||+++..++....... + .+|+++.+
T Consensus       281 ~~l~~~~~~g~l~~--~i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~  326 (326)
T COG0604         281 AELFDLLASGKLKP--VIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV  326 (326)
T ss_pred             HHHHHHHHcCCCcc--eeccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence            78999999996654  477899999965555544443 3 45999864

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=6e-48  Score=361.53  Aligned_cols=335  Identities=27%  Similarity=0.397  Sum_probs=269.6

Q ss_pred             CCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCc-cccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457            5 PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPV-IFGHEAVGVVESVGEYVEEVKERDLVLPI   83 (371)
Q Consensus         5 ~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~-~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~   83 (371)
                      ++....+++.+.|.+.+++|+|||.+++||++|++.+++..+..  ..|. ++|||++|+|+++| .++.+++||||++.
T Consensus         9 ~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~--~~~~~i~GHE~~G~V~evG-~~~~~~~GdrVvv~   85 (350)
T COG1063           9 GGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFV--PPGDIILGHEFVGEVVEVG-VVRGFKVGDRVVVE   85 (350)
T ss_pred             cCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCC--CCCCcccCccceEEEEEec-cccCCCCCCEEEEC
Confidence            33333466666667899999999999999999999999986655  4444 89999999999999 77889999999999


Q ss_pred             cCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEEC-CCCCCcchhh
Q 017457           84 FHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI-TPHIPLGIAC  162 (371)
Q Consensus        84 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~-P~~l~~~~aa  162 (371)
                      +...|++|.+|+.+.++.|....+   +|....+.            +  -.|+|+||+.+|.++.+++ |++++ .+++
T Consensus        86 ~~~~Cg~C~~C~~G~~~~C~~~~~---~g~~~~~~------------~--~~G~~aEyv~vp~~~~~~~~pd~~~-~~~a  147 (350)
T COG1063          86 PNIPCGHCRYCRAGEYNLCENPGF---YGYAGLGG------------G--IDGGFAEYVRVPADFNLAKLPDGID-EEAA  147 (350)
T ss_pred             CCcCCCCChhHhCcCcccCCCccc---cccccccC------------C--CCCceEEEEEeccccCeecCCCCCC-hhhh
Confidence            999999999999999999994432   33222110            0  1149999999997665555 78885 4445


Q ss_pred             ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcceEEcCCCCCCc
Q 017457          163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDK  241 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~~~~  241 (371)
                      ++.-++.++|++........++.+|+|+|+|++|++++++|+.+|+.+|++++.+++|++.+++ .|++.+++..+   +
T Consensus       148 al~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~---~  224 (350)
T COG1063         148 ALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSE---D  224 (350)
T ss_pred             hhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCcc---c
Confidence            5555999998863344455666699999999999999999999999999999999999999999 66776776655   3


Q ss_pred             cHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchh
Q 017457          242 TVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRS  319 (371)
Q Consensus       242 ~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~  319 (371)
                      +....+.+++++ ++|++|+|+|...++..+++.++++ |+++.+|....... .++...+.. ++++.|+...  ....
T Consensus       225 ~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~g-G~v~~vGv~~~~~~-~~~~~~~~~kel~l~gs~~~--~~~~  300 (350)
T COG1063         225 DAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGVYGGEDI-PLPAGLVVSKELTLRGSLRP--SGRE  300 (350)
T ss_pred             cHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCC-CEEEEEeccCCccC-ccCHHHHHhcccEEEeccCC--CCcc
Confidence            677788889988 9999999999888899999999998 99999998543322 455555555 8999998321  1235


Q ss_pred             hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCce--eeEEEEe
Q 017457          320 DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS--LRCIIWM  367 (371)
Q Consensus       320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~--~kvvv~~  367 (371)
                      +++.+++++++|++++.+++++.++++++++|++.+.+...  .|+++.+
T Consensus       301 ~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~  350 (350)
T COG1063         301 DFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP  350 (350)
T ss_pred             cHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence            79999999999999999999999999999999999988553  4888763

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=1.8e-47  Score=360.41  Aligned_cols=330  Identities=25%  Similarity=0.417  Sum_probs=278.6

Q ss_pred             ccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCC-CCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEe
Q 017457            3 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSST-DLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVL   81 (371)
Q Consensus         3 ~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~-~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~   81 (371)
                      .++++.++++++|.|+|.++||+|||.++++|++|++.+.+.. +..  .+|.++|||++|+|+++|++++.+ +||+|+
T Consensus         5 ~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~--~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV~   81 (349)
T TIGR03201         5 TEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNH--ALPLALGHEISGRVIQAGAGAASW-IGKAVI   81 (349)
T ss_pred             ecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccC--CCCeeccccceEEEEEeCCCcCCC-CCCEEE
Confidence            3455568999999999999999999999999999998874433 222  578899999999999999999887 999999


Q ss_pred             eccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCC------C
Q 017457           82 PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP------H  155 (371)
Q Consensus        82 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~------~  155 (371)
                      +.+...|++|++|+.+.+++|.....   .|...+|                   +|+||+.++++.++++|+      +
T Consensus        82 ~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~ae~~~v~~~~~~~ip~~~~~~~~  139 (349)
T TIGR03201        82 VPAVIPCGECELCKTGRGTICRAQKM---PGNDMQG-------------------GFASHIVVPAKGLCVVDEARLAAAG  139 (349)
T ss_pred             ECCCCCCCCChhhhCcCcccCCCCCc---cCcCCCC-------------------cccceEEechHHeEECCcccccccC
Confidence            99999999999999999999976543   3333334                   999999999999999999      8


Q ss_pred             CCcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcC
Q 017457          156 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP  235 (371)
Q Consensus       156 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~  235 (371)
                      +++++++.+++++.|||+++. ...+++|++|+|+|+|++|++++|+|+++|+ +|+++++++++++.++++|+++++++
T Consensus       140 ~~~~~~a~~~~~~~ta~~a~~-~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~~  217 (349)
T TIGR03201       140 LPLEHVSVVADAVTTPYQAAV-QAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLNP  217 (349)
T ss_pred             CCHHHhhhhcchHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEecC
Confidence            999999999999999999764 5789999999999999999999999999999 89999999999999999999999987


Q ss_pred             CCCCCccHHHHHHHhhCC-CcC----EEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEE
Q 017457          236 ATCGDKTVSQVIKEMTDG-GAD----YCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCG  309 (371)
Q Consensus       236 ~~~~~~~~~~~i~~~~~g-g~d----~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g  309 (371)
                      .+.+.+++.+.+++++++ ++|    ++|||+|+...++.++++++++ |+++.+|....  ...++...++. +.++.|
T Consensus       218 ~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~~~~~~~g  294 (349)
T TIGR03201       218 KDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG-GTLVVVGYTMA--KTEYRLSNLMAFHARALG  294 (349)
T ss_pred             ccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcC-CeEEEECcCCC--CcccCHHHHhhcccEEEE
Confidence            652223567778888877 886    8999999988788899999998 99999997532  23455555554 678888


Q ss_pred             eeccCCCchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEE
Q 017457          310 TYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW  366 (371)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~  366 (371)
                      ++...   ..+++++++++.+|++++.+++ +.|+|+++++||+.+.+++.. |++++
T Consensus       295 ~~~~~---~~~~~~~~~~i~~g~i~~~~~i-~~~~l~~~~~A~~~~~~~~~~~k~~~~  348 (349)
T TIGR03201       295 NWGCP---PDRYPAALDLVLDGKIQLGPFV-ERRPLDQIEHVFAAAHHHKLKRRAILT  348 (349)
T ss_pred             EecCC---HHHHHHHHHHHHcCCCCcccce-EEecHHHHHHHHHHHHcCCccceEEec
Confidence            75322   4578999999999999877777 579999999999999988765 88775

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=1.9e-47  Score=361.16  Aligned_cols=329  Identities=21%  Similarity=0.340  Sum_probs=268.8

Q ss_pred             cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457            4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI   83 (371)
Q Consensus         4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~   83 (371)
                      +.+..+++.+++.|+|+++||+|||.+++||++|++.+.|.++..  .+|.++|||++|+|+++|+++++|++||+|++.
T Consensus        20 ~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~--~~p~i~GhE~~G~V~~vG~~v~~~~vGdrV~~~   97 (360)
T PLN02586         20 DPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFT--RYPIVPGHEIVGIVTKLGKNVKKFKEGDRVGVG   97 (360)
T ss_pred             CCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCC--CCCccCCcceeEEEEEECCCCCccCCCCEEEEc
Confidence            334568888899999999999999999999999999998876433  578999999999999999999999999999865


Q ss_pred             cC-CCCCCCccccCCCCCCCCCCCCCCC----CCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCc
Q 017457           84 FH-RDCGECRDCKSSKSNTCSKFGRGYR----PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPL  158 (371)
Q Consensus        84 ~~-~~~~~c~~~~~~~~~~~~~~~~~~~----~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~  158 (371)
                      +. ..|+.|++|+.+.+++|+.......    .|...+                   |+|+||++++++.++++|+++++
T Consensus        98 ~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~-------------------G~~aey~~v~~~~~~~lP~~ls~  158 (360)
T PLN02586         98 VIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNY-------------------GGYSDMIVVDQHFVLRFPDNLPL  158 (360)
T ss_pred             cccCcCCCCccccCCCcccCCCccccccccccCCCcCC-------------------CccceEEEEchHHeeeCCCCCCH
Confidence            54 5799999999999999986542100    012222                   49999999999999999999999


Q ss_pred             chhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHH-HHHHHhCcceEEcCCC
Q 017457          159 GIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKF-EIGKKFGITDFINPAT  237 (371)
Q Consensus       159 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~-~~~~~lga~~v~~~~~  237 (371)
                      ++++.+++.+.|||+++.....+++|++|||.|+|++|++++|+||++|+ +|++++.+++++ +.++++|+++++++.+
T Consensus       159 ~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~  237 (360)
T PLN02586        159 DAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKEDEAINRLGADSFLVSTD  237 (360)
T ss_pred             HHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcchhhhHHHhCCCcEEEcCCC
Confidence            99999999999999977655667899999999999999999999999999 788877666654 4567899999998654


Q ss_pred             CCCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCC
Q 017457          238 CGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLK  316 (371)
Q Consensus       238 ~~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~  316 (371)
                         .   +.+++.++ ++|++||++|....++.++++++++ |+++.+|...  ....++...++. +..+.|+....  
T Consensus       238 ---~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~vG~~~--~~~~~~~~~~~~~~~~i~g~~~~~--  305 (360)
T PLN02586        238 ---P---EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVN-GKLITLGLPE--KPLELPIFPLVLGRKLVGGSDIGG--  305 (360)
T ss_pred             ---H---HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCC-cEEEEeCCCC--CCCccCHHHHHhCCeEEEEcCcCC--
Confidence               2   24555554 7999999999876689999999998 9999999643  234555555554 66777765432  


Q ss_pred             chhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEeCcC
Q 017457          317 PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDKL  370 (371)
Q Consensus       317 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~~~~  370 (371)
                       ..+++++++++++|++++.  + ++|+|+|+++||+.+.+++.. |+++.+..+
T Consensus       306 -~~~~~~~~~li~~g~i~~~--~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~~~~  356 (360)
T PLN02586        306 -IKETQEMLDFCAKHNITAD--I-ELIRMDEINTAMERLAKSDVRYRFVIDVANS  356 (360)
T ss_pred             -HHHHHHHHHHHHhCCCCCc--E-EEEeHHHHHHHHHHHHcCCCcEEEEEEcccc
Confidence             4578999999999988753  4 689999999999999988764 999987543

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=9.7e-48  Score=366.09  Aligned_cols=339  Identities=24%  Similarity=0.362  Sum_probs=266.3

Q ss_pred             cCCCCcEEEEEecCCCC-------CCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCC
Q 017457            4 IPGKPLVIEEIEVEPPK-------AWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE   76 (371)
Q Consensus         4 ~~~~~l~~~~~~~~~~~-------~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~   76 (371)
                      ...++++++++|.|+|+       +|||||||++++||++|++.+.|.++ .  .+|.++|||++|+|+++|++|++|++
T Consensus         9 ~~~~~~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~-~--~~p~i~GhE~~G~V~~vG~~V~~~~v   85 (393)
T TIGR02819         9 LGPGKVEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT-A--PTGLVLGHEITGEVIEKGRDVEFIKI   85 (393)
T ss_pred             ecCCceeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC-C--CCCccccceeEEEEEEEcCccccccC
Confidence            34446899999999874       68999999999999999999988653 2  57899999999999999999999999


Q ss_pred             CCEEeeccCCCCCCCccccCCCCCCCCCCCCC---CCCCCCCCCCccccccCCceeecccCcccccceeeeecc--eeEE
Q 017457           77 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRG---YRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVK  151 (371)
Q Consensus        77 Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~---~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~  151 (371)
                      ||||++.+...|+.|++|++++++.|......   ..+|+...|     .          -.|+|+||+.+++.  .+++
T Consensus        86 GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~-----~----------~~G~~aey~~v~~~~~~l~~  150 (393)
T TIGR02819        86 GDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMG-----G----------WVGGQSEYVMVPYADFNLLK  150 (393)
T ss_pred             CCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccC-----C----------CCCceEEEEEechhhCceEE
Confidence            99999999999999999999999999864310   001211000     0          02599999999964  7999


Q ss_pred             CCCCCCc----chhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh
Q 017457          152 ITPHIPL----GIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF  227 (371)
Q Consensus       152 ~P~~l~~----~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l  227 (371)
                      +|++++.    .+++.+.+++.+||+++ ...++++|++|||.|+|++|++++|+|+++|++.|++++++++|++.++++
T Consensus       151 vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~  229 (393)
T TIGR02819       151 FPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSF  229 (393)
T ss_pred             CCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHc
Confidence            9998754    34667777899999975 457899999999988899999999999999995566677888999999999


Q ss_pred             CcceEEcCCCCCCccHHHHHHHhhCC-CcCEEEECCCCh--------------HHHHHHHHHhhcCCceEEEECccCCCC
Q 017457          228 GITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLT--------------SVMNDAFNSSREGWGKTVILGVEMHGS  292 (371)
Q Consensus       228 ga~~v~~~~~~~~~~~~~~i~~~~~g-g~d~vid~~g~~--------------~~~~~~~~~l~~~~G~~v~~g~~~~~~  292 (371)
                      |++.+...++   .++.+.+.+++++ ++|++||++|.+              .+++.+++.++++ |+++.+|......
T Consensus       230 Ga~~v~~~~~---~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~i~~~G~~~~~~  305 (393)
T TIGR02819       230 GCETVDLSKD---ATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVG-GAIGIPGLYVTED  305 (393)
T ss_pred             CCeEEecCCc---ccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCC-CEEEEeeecCCcc
Confidence            9975443333   4677778888877 899999999985              3599999999998 9999999752211


Q ss_pred             c-----------eecCHHHHhc-CceEEEeeccCCCchhhHHHHHHHHHcCCCCCCCcee-EEEecccHHHHHHHHhcCc
Q 017457          293 P-----------ISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFIT-HEVSFHDINKAFDLLLEGK  359 (371)
Q Consensus       293 ~-----------~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~a~~~~~~~~  359 (371)
                      .           .++....+.. ++++.+..   ....+.+.++++++++|++++.++++ ++|+|+++++||+.+.++.
T Consensus       306 ~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~---~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~~~~  382 (393)
T TIGR02819       306 PGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQ---TPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFDAGA  382 (393)
T ss_pred             cccccccccccccccchHHhhccCceEEecc---CChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHhhCC
Confidence            1           1222233323 45666532   11122346899999999999887776 7899999999999998887


Q ss_pred             eeeEEEEeC
Q 017457          360 SLRCIIWMD  368 (371)
Q Consensus       360 ~~kvvv~~~  368 (371)
                      ..|+++.+.
T Consensus       383 ~~Kvvi~~~  391 (393)
T TIGR02819       383 AKKFVIDPH  391 (393)
T ss_pred             ceEEEEeCC
Confidence            779999874

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=3.3e-47  Score=360.70  Aligned_cols=329  Identities=23%  Similarity=0.331  Sum_probs=270.1

Q ss_pred             cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457            4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI   83 (371)
Q Consensus         4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~   83 (371)
                      .++..++..+++.|+|+++||+|||.+++||++|++.+.|.+...  .+|.++|||++|+|+++|+++++|++||+|++.
T Consensus        14 ~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~--~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV~~~   91 (375)
T PLN02178         14 DESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFS--RYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVG   91 (375)
T ss_pred             cCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCC--CCCcccCceeeEEEEEECCCCCccCCCCEEEEc
Confidence            344568888899999999999999999999999999998876433  568899999999999999999999999999876


Q ss_pred             cCC-CCCCCccccCCCCCCCCCCCCCCC----CCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCc
Q 017457           84 FHR-DCGECRDCKSSKSNTCSKFGRGYR----PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPL  158 (371)
Q Consensus        84 ~~~-~~~~c~~~~~~~~~~~~~~~~~~~----~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~  158 (371)
                      +.. .|++|.+|+.+.+++|........    .|...+                   |+|+||+.++++.++++|+++++
T Consensus        92 ~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~-------------------G~~aey~~v~~~~~~~lP~~ls~  152 (375)
T PLN02178         92 VIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQ-------------------GGYSDVIVVDHRFVLSIPDGLPS  152 (375)
T ss_pred             CccCCCCCChhHhCcchhcCCCccccccccccCCCcCC-------------------CccccEEEEchHHeEECCCCCCH
Confidence            655 699999999999999987542100    011112                   49999999999999999999999


Q ss_pred             chhhccccchhhhHHHHHHHcC-CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhH-HHHHHHhCcceEEcCC
Q 017457          159 GIACLLSCGVSTGVGAAWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK-FEIGKKFGITDFINPA  236 (371)
Q Consensus       159 ~~aa~~~~~~~ta~~~l~~~~~-~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~-~~~~~~lga~~v~~~~  236 (371)
                      ++++.+++.+.|||+++..... .++|++|+|.|+|++|++++|+|+++|+ +|+++++++++ .+.++++|+++++++.
T Consensus       153 ~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i~~~  231 (375)
T PLN02178        153 DSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSFLVTT  231 (375)
T ss_pred             HHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEEEcCc
Confidence            9999999999999987644332 3689999999999999999999999999 78888876554 6778899999999865


Q ss_pred             CCCCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCC
Q 017457          237 TCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGL  315 (371)
Q Consensus       237 ~~~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~  315 (371)
                      +   .   +.+.+.++ ++|++||++|....+..++++++++ |+++.+|...  ....++...++. ++++.|+.... 
T Consensus       232 ~---~---~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~vG~~~--~~~~~~~~~~~~~~~~i~g~~~~~-  300 (375)
T PLN02178        232 D---S---QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVS-GKLVALGLPE--KPLDLPIFPLVLGRKMVGGSQIGG-  300 (375)
T ss_pred             C---H---HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCC-CEEEEEccCC--CCCccCHHHHHhCCeEEEEeCccC-
Confidence            4   2   34555554 7999999999886689999999998 9999999743  234555555544 88899886443 


Q ss_pred             CchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEeCcC
Q 017457          316 KPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDKL  370 (371)
Q Consensus       316 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~~~~  370 (371)
                        .+++.++++++++|++++.  + ++|||+++++|++.+.+++.. |+++.+.++
T Consensus       301 --~~~~~~~~~l~~~g~i~~~--i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~~~~  351 (375)
T PLN02178        301 --MKETQEMLEFCAKHKIVSD--I-ELIKMSDINSAMDRLAKSDVRYRFVIDVANS  351 (375)
T ss_pred             --HHHHHHHHHHHHhCCCccc--E-EEEeHHHHHHHHHHHHcCCCceEEEEEeccc
Confidence              4678999999999988754  4 679999999999999988764 999988653

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=2e-46  Score=353.19  Aligned_cols=332  Identities=22%  Similarity=0.337  Sum_probs=272.2

Q ss_pred             cCCCCcEEEEEecCCC-CCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEee
Q 017457            4 IPGKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP   82 (371)
Q Consensus         4 ~~~~~l~~~~~~~~~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~   82 (371)
                      .+...+++++.|.|+| .++||+|||.++++|++|++.+..... .  .+|.++|||++|+|+++|+++++|++||+|++
T Consensus         7 ~~~~~~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~-~--~~p~i~G~e~~G~V~~vG~~v~~~~vGd~V~~   83 (347)
T PRK10309          7 DTDGIVRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGA-H--YYPITLGHEFSGYVEAVGSGVDDLHPGDAVAC   83 (347)
T ss_pred             eCCCceEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCC-C--CCCcccccceEEEEEEeCCCCCCCCCCCEEEE
Confidence            3344589999999987 599999999999999999875322111 1  46789999999999999999999999999999


Q ss_pred             ccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhh
Q 017457           83 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC  162 (371)
Q Consensus        83 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa  162 (371)
                      .+...|+.|++|..+.++.|.....   .|...+                   |+|++|+.++++.++++|+++++++++
T Consensus        84 ~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~~~-------------------G~~aey~~v~~~~~~~lP~~~s~~~aa  141 (347)
T PRK10309         84 VPLLPCFTCPECLRGFYSLCAKYDF---IGSRRD-------------------GGNAEYIVVKRKNLFALPTDMPIEDGA  141 (347)
T ss_pred             CCCcCCCCCcchhCcCcccCCCcce---eccCCC-------------------CccceeEEeehHHeEECcCCCCHHHhh
Confidence            9999999999999999999976432   333333                   499999999999999999999999998


Q ss_pred             ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457          163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT  242 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~  242 (371)
                      .+. .+.+++++ .....+++|++|||+|+|++|++++|+|+++|++.|+++++++++++.++++|+++++++++   .+
T Consensus       142 ~~~-~~~~~~~~-~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~---~~  216 (347)
T PRK10309        142 FIE-PITVGLHA-FHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSRE---MS  216 (347)
T ss_pred             hhh-HHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcc---cC
Confidence            875 45667775 46678899999999999999999999999999955889999999999999999999998776   44


Q ss_pred             HHHHHHHhhCC-CcC-EEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceec-CHHHHh-cCceEEEeeccCCC--
Q 017457          243 VSQVIKEMTDG-GAD-YCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISL-NSIEIL-KGRSVCGTYFGGLK--  316 (371)
Q Consensus       243 ~~~~i~~~~~g-g~d-~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~-~~~~~~-~~~~~~g~~~~~~~--  316 (371)
                       .+.+.+++.+ ++| ++|||+|+...+..++++++++ |+++.+|.......... +...++ +++++.|+......  
T Consensus       217 -~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~  294 (347)
T PRK10309        217 -APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPR-AQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPW  294 (347)
T ss_pred             -HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccCCc
Confidence             4567777766 888 9999999887689999999998 99999997543211111 122344 47899998654221  


Q ss_pred             chhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEe
Q 017457          317 PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM  367 (371)
Q Consensus       317 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~  367 (371)
                      ..++++++++++++|++.+.++++++|+|+++++|++.+.+++.. |+++.+
T Consensus       295 ~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  346 (347)
T PRK10309        295 PGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI  346 (347)
T ss_pred             chhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence            246788999999999998888899999999999999999887754 999875

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=7.5e-46  Score=352.05  Aligned_cols=359  Identities=47%  Similarity=0.771  Sum_probs=289.8

Q ss_pred             ccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEee
Q 017457            3 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP   82 (371)
Q Consensus         3 ~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~   82 (371)
                      .++++.+++++.|.|+|.++||+|||.++++|++|++.+.|.+. .  .+|.++|||++|+|+++|++++.+++||+|++
T Consensus        14 ~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~--~~p~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~   90 (373)
T cd08299          14 WEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-T--PFPVILGHEAAGIVESVGEGVTTVKPGDKVIP   90 (373)
T ss_pred             ecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-C--CCCccccccceEEEEEeCCCCccCCCCCEEEE
Confidence            45566789999999999999999999999999999999988762 2  57889999999999999999999999999999


Q ss_pred             ccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhh
Q 017457           83 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC  162 (371)
Q Consensus        83 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa  162 (371)
                      .+..+|++|.+|..+.++.|.......-.|...+++.++..+ |...+++...|+|++|+++++++++++|+++++++++
T Consensus        91 ~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l~~~~aa  169 (373)
T cd08299          91 LFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCK-GKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAPLEKVC  169 (373)
T ss_pred             CCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccC-CcccccccCCCcccceEEecccceeeCCCCCChHHhh
Confidence            988999999999999999998754311012222221111111 1222334345799999999999999999999999999


Q ss_pred             ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457          163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT  242 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~  242 (371)
                      .+++++.+||+++....++++|++|||+|+|++|++++++|+++|+++|+++++++++++.++++|++++++..+ ...+
T Consensus       170 ~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~~~-~~~~  248 (373)
T cd08299         170 LIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQD-YKKP  248 (373)
T ss_pred             eeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecccc-cchh
Confidence            999999999998778889999999999988999999999999999867999999999999999999999998764 1123


Q ss_pred             HHHHHHHhhCCCcCEEEECCCChHHHHHHHHHh-hcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCchhhH
Q 017457          243 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSS-REGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDI  321 (371)
Q Consensus       243 ~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l-~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  321 (371)
                      +.+.+.+++++++|+++|++|++..+..++..+ +++ |+++.+|........+++...+..+.++.++....+....++
T Consensus       249 ~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  327 (373)
T cd08299         249 IQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGY-GVSVIVGVPPSSQNLSINPMLLLTGRTWKGAVFGGWKSKDSV  327 (373)
T ss_pred             HHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCC-CEEEEEccCCCCceeecCHHHHhcCCeEEEEEecCCccHHHH
Confidence            667777777778999999999866577766655 566 999999974332345555544455788998877766555667


Q ss_pred             HHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEEe
Q 017457          322 ATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM  367 (371)
Q Consensus       322 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~~  367 (371)
                      .++++.+.++.+.+.+++++.|+++++++|++.+.+++..|+++.+
T Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~~k~~~~~  373 (373)
T cd08299         328 PKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKSIRTVLTF  373 (373)
T ss_pred             HHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCcceEEEeC
Confidence            7888888888777776788999999999999999887767888764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=1.8e-46  Score=350.42  Aligned_cols=313  Identities=19%  Similarity=0.257  Sum_probs=265.5

Q ss_pred             CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccC-
Q 017457            7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH-   85 (371)
Q Consensus         7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~-   85 (371)
                      ..++++++|.|+|+++||+|||.++++|++|.+.+.|.++..  .+|.++|||++|+|+++|+.+++|++||+|++.+. 
T Consensus        13 ~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~--~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~   90 (329)
T TIGR02822        13 GPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVH--RPRVTPGHEVVGEVAGRGADAGGFAVGDRVGIAWLR   90 (329)
T ss_pred             CCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCC--CCCccCCcceEEEEEEECCCCcccCCCCEEEEcCcc
Confidence            358999999999999999999999999999999998876533  45789999999999999999999999999987654 


Q ss_pred             CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccc
Q 017457           86 RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLS  165 (371)
Q Consensus        86 ~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~  165 (371)
                      ..|+.|++|..+.+++|.....   .|+..+|                   +|+||+.++++.++++|+++++++++.++
T Consensus        91 ~~c~~c~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~lP~~~~~~~aa~l~  148 (329)
T TIGR02822        91 RTCGVCRYCRRGAENLCPASRY---TGWDTDG-------------------GYAEYTTVPAAFAYRLPTGYDDVELAPLL  148 (329)
T ss_pred             CcCCCChHHhCcCcccCCCccc---CCcccCC-------------------cceeEEEeccccEEECCCCCCHHHhHHHh
Confidence            4699999999999999987653   4443344                   99999999999999999999999999999


Q ss_pred             cchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHH
Q 017457          166 CGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQ  245 (371)
Q Consensus       166 ~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~  245 (371)
                      +.+.|||+++ ...++++|++|||+|+|++|++++|+|+++|+ +|++++++++|++.++++|+++++++.+   ..   
T Consensus       149 ~~~~ta~~~~-~~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~~---~~---  220 (329)
T TIGR02822       149 CAGIIGYRAL-LRASLPPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGAYD---TP---  220 (329)
T ss_pred             ccchHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceeccccc---cC---
Confidence            9999999976 46889999999999999999999999999999 8999999999999999999999987543   11   


Q ss_pred             HHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhhHHHH
Q 017457          246 VIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATL  324 (371)
Q Consensus       246 ~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~  324 (371)
                            .+++|+++++.+....+..++++++++ |+++.+|..... ...++...++. ++++.++...   .++++.++
T Consensus       221 ------~~~~d~~i~~~~~~~~~~~~~~~l~~~-G~~v~~G~~~~~-~~~~~~~~~~~~~~~i~g~~~~---~~~~~~~~  289 (329)
T TIGR02822       221 ------PEPLDAAILFAPAGGLVPPALEALDRG-GVLAVAGIHLTD-TPPLNYQRHLFYERQIRSVTSN---TRADAREF  289 (329)
T ss_pred             ------cccceEEEECCCcHHHHHHHHHhhCCC-cEEEEEeccCcc-CCCCCHHHHhhCCcEEEEeecC---CHHHHHHH
Confidence                  126899998888777799999999998 999999974222 22345444444 7888887533   24678889


Q ss_pred             HHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEE
Q 017457          325 AQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII  365 (371)
Q Consensus       325 ~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv  365 (371)
                      +++++++++.   +++++|+|+|+++|++.+.+++.. |+++
T Consensus       290 ~~l~~~g~i~---~i~~~~~l~~~~~A~~~~~~~~~~Gkvvl  328 (329)
T TIGR02822       290 LELAAQHGVR---VTTHTYPLSEADRALRDLKAGRFDGAAVL  328 (329)
T ss_pred             HHHHHhCCCe---eEEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence            9999999875   357999999999999999988765 8876

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=6.1e-46  Score=351.81  Aligned_cols=342  Identities=25%  Similarity=0.414  Sum_probs=282.9

Q ss_pred             cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCC------cCCC
Q 017457            4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE------VKER   77 (371)
Q Consensus         4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~------~~~G   77 (371)
                      ++++.+++++.+.|+|+++||+|||.++++|++|++...|.++..  .+|.++|||++|+|+++|++++.      |++|
T Consensus         8 ~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~--~~p~~~G~e~~G~V~~vG~~v~~~~~~~~~~~G   85 (361)
T cd08231           8 GPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRV--PLPIILGHEGVGRVVALGGGVTTDVAGEPLKVG   85 (361)
T ss_pred             CCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCC--CCCcccccCCceEEEEeCCCccccccCCccCCC
Confidence            445579999999999999999999999999999999998876533  67889999999999999999986      9999


Q ss_pred             CEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCC-CCccccccCCceeecccCcccccceeeeecc-eeEECCCC
Q 017457           78 DLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRD-GTSRFRELKGDVIHHFLNISSFTEYSVVDIT-HVVKITPH  155 (371)
Q Consensus        78 d~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~-g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~-~~~~~P~~  155 (371)
                      |+|++.+...|++|.+|+.+++++|.....   .|...+ +.             ....|+|++|+.++++ .++++|++
T Consensus        86 d~V~~~~~~~~~~c~~~~~~~~~~c~~~~~---~~~~~~~~~-------------~~~~g~~a~~~~v~~~~~~~~lP~~  149 (361)
T cd08231          86 DRVTWSVGAPCGRCYRCLVGDPTKCENRKK---YGHEASCDD-------------PHLSGGYAEHIYLPPGTAIVRVPDN  149 (361)
T ss_pred             CEEEEcccCCCCCChhHhCcCccccccchh---ccccccccC-------------CCCCcccceEEEecCCCceEECCCC
Confidence            999999999999999999999999987653   332211 00             0012599999999986 79999999


Q ss_pred             CCcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcC
Q 017457          156 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP  235 (371)
Q Consensus       156 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~  235 (371)
                      ++..+++.++++++|||+++......++|++|||+|+|++|++++++|+++|+++|+++++++++.++++++|++.++++
T Consensus       150 ~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~  229 (361)
T cd08231         150 VPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDI  229 (361)
T ss_pred             CCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcC
Confidence            99999999989999999987666666799999999989999999999999999789999999999999999999999887


Q ss_pred             CCCCCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeecc
Q 017457          236 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFG  313 (371)
Q Consensus       236 ~~~~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~  313 (371)
                      +.....++...+.+++++ ++|++||++|+...+..++++++++ |+++.+|.........++...++. +.++.++...
T Consensus       230 ~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (361)
T cd08231         230 DELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNY  308 (361)
T ss_pred             cccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccC-CEEEEEcCCCCCCccccCHHHHhhcccEEEEcccC
Confidence            651112233567888877 9999999999866689999999998 999999975433334455444444 8888887643


Q ss_pred             CCCchhhHHHHHHHHHcC--CCCCCCceeEEEecccHHHHHHHHhcCceeeEEEEe
Q 017457          314 GLKPRSDIATLAQKYLDK--ELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM  367 (371)
Q Consensus       314 ~~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~~  367 (371)
                      +   .++++++++++.++  .+.+.++++++|+++++++||+.+.++...|++|.+
T Consensus       309 ~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~k~vi~~  361 (361)
T cd08231         309 D---PSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTALKVVIDP  361 (361)
T ss_pred             C---chhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCceEEEeCC
Confidence            3   45788899999988  566777788999999999999999887767998853

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=7.7e-46  Score=350.21  Aligned_cols=326  Identities=20%  Similarity=0.307  Sum_probs=255.5

Q ss_pred             CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCC-CCCCccccccccEEEEEeCCCCCCcCCCCEEeeccC
Q 017457            7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPK-LPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH   85 (371)
Q Consensus         7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~   85 (371)
                      .+++++++|.|+|+++||||||+|++||++|++.++|.++..+ ..+|.++|||++|+|+++|++ ++|++||+|++.+.
T Consensus        11 ~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~vGdrV~~~~~   89 (355)
T cd08230          11 PGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLSPGDLVVPTVR   89 (355)
T ss_pred             CCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCCCCCEEEeccc
Confidence            3489999999999999999999999999999999998754321 146889999999999999999 99999999999988


Q ss_pred             CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccc
Q 017457           86 RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLS  165 (371)
Q Consensus        86 ~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~  165 (371)
                      ..|+.|.+|+.+.+++|...... ..|...                  ..|+|+||+.++++.++++|++++ + ++.+.
T Consensus        90 ~~cg~C~~c~~g~~~~c~~~~~~-~~g~~~------------------~~G~~aey~~~~~~~~~~~P~~~~-~-~a~~~  148 (355)
T cd08230          90 RPPGKCLNCRIGRPDFCETGEYT-ERGIKG------------------LHGFMREYFVDDPEYLVKVPPSLA-D-VGVLL  148 (355)
T ss_pred             cCCCcChhhhCcCcccCCCccee-ccCcCC------------------CCccceeEEEeccccEEECCCCCC-c-ceeec
Confidence            89999999999999999754320 012110                  125999999999999999999999 3 34444


Q ss_pred             cchhhhHHHHHH------HcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcC---ChhHHHHHHHhCcceEEcCC
Q 017457          166 CGVSTGVGAAWK------VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI---NPEKFEIGKKFGITDFINPA  236 (371)
Q Consensus       166 ~~~~ta~~~l~~------~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~---~~~~~~~~~~lga~~v~~~~  236 (371)
                      .++.++++++..      ....++|++|||+|+|++|++++|+||++|+ +|+++++   +++|++.++++|++. +++.
T Consensus       149 ~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~  226 (355)
T cd08230         149 EPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEELGATY-VNSS  226 (355)
T ss_pred             chHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEE-ecCC
Confidence            465555543221      2236789999999999999999999999999 8999987   688999999999987 4555


Q ss_pred             CCCCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecC----HHHHh-cCceEEEee
Q 017457          237 TCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLN----SIEIL-KGRSVCGTY  311 (371)
Q Consensus       237 ~~~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~----~~~~~-~~~~~~g~~  311 (371)
                      +   +++.+ . . ..+++|+|||++|++..+..+++.++++ |+++.+|........+++    ...++ +++++.|+.
T Consensus       227 ~---~~~~~-~-~-~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~  299 (355)
T cd08230         227 K---TPVAE-V-K-LVGEFDLIIEATGVPPLAFEALPALAPN-GVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSV  299 (355)
T ss_pred             c---cchhh-h-h-hcCCCCEEEECcCCHHHHHHHHHHccCC-cEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEec
Confidence            4   34433 1 1 2238999999999876689999999998 999999975432333444    22333 488999975


Q ss_pred             ccCCCchhhHHHHHHHHHcCCC----CCCCceeEEEecccHHHHHHHHhcCceeeEEEEe
Q 017457          312 FGGLKPRSDIATLAQKYLDKEL----NLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM  367 (371)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~g~~----~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~~  367 (371)
                      ...   .++++++++++.++.+    .+.++++++|+++++++||+.+.++. .|+++.+
T Consensus       300 ~~~---~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~-~K~v~~~  355 (355)
T cd08230         300 NAN---KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE-IKVVIEW  355 (355)
T ss_pred             CCc---hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC-eEEEeeC
Confidence            333   4578899999998862    25567889999999999999886543 5998864

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=100.00  E-value=4.3e-45  Score=346.20  Aligned_cols=355  Identities=46%  Similarity=0.815  Sum_probs=295.0

Q ss_pred             ccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEee
Q 017457            3 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP   82 (371)
Q Consensus         3 ~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~   82 (371)
                      .++++++++++.+.|++.+++|+||+.++++|++|++...+.+..   .+|.++|||++|+|+++|++++++++||+|++
T Consensus         7 ~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~~---~~~~i~g~e~~G~V~~vG~~v~~~~~Gd~Vv~   83 (365)
T cd05279           7 WEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLPT---PLPVILGHEGAGIVESIGPGVTTLKPGDKVIP   83 (365)
T ss_pred             ecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCCC---CCCcccccceeEEEEEeCCCcccCCCCCEEEE
Confidence            345657999999999999999999999999999999998887542   46789999999999999999999999999999


Q ss_pred             ccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhh
Q 017457           83 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC  162 (371)
Q Consensus        83 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa  162 (371)
                      .+...|++|.+|..+.+++|.........|...+|..++.. +|.-.+|+.+.|+|++|+.++++.++++|+++++++++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~~~a~  162 (365)
T cd05279          84 LFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTC-KGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVC  162 (365)
T ss_pred             cCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeec-cCCccccccccccccceEEecCCceEECCCCCCHHHhh
Confidence            98899999999999999999876532222322223222111 22223344455799999999999999999999999999


Q ss_pred             ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCc-
Q 017457          163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK-  241 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~-  241 (371)
                      .+++++.+||+++....++++|++|||+|+|++|++++++|+++|+..|+++++++++.+.++++|++++++.++   . 
T Consensus       163 ~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~---~~  239 (365)
T cd05279         163 LIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRD---QD  239 (365)
T ss_pred             HhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeeccccc---cc
Confidence            999999999998878889999999999988999999999999999966888888999999999999999998766   4 


Q ss_pred             -cHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhh-cCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCchh
Q 017457          242 -TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSR-EGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRS  319 (371)
Q Consensus       242 -~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~-~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  319 (371)
                       ++.+.+.+++++++|++||++|....+..++++++ ++ |+++.+|.........++...+.++.++.|+....+...+
T Consensus       240 ~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~  318 (365)
T cd05279         240 KPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGG-GTSVVVGVPPSGTEATLDPNDLLTGRTIKGTVFGGWKSKD  318 (365)
T ss_pred             chHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCC-CEEEEEecCCCCCceeeCHHHHhcCCeEEEEeccCCchHh
Confidence             67777888876699999999987666899999999 97 9999998643234566776666457788888766665567


Q ss_pred             hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEE
Q 017457          320 DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII  365 (371)
Q Consensus       320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv  365 (371)
                      .+.+++++++++.+.+.++.+++|+++++++|++.+.+++..|++|
T Consensus       319 ~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~~  364 (365)
T cd05279         319 SVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESIRTIL  364 (365)
T ss_pred             HHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCceeeee
Confidence            8899999999998877666779999999999999998877667776

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=2.7e-46  Score=315.82  Aligned_cols=306  Identities=25%  Similarity=0.275  Sum_probs=261.5

Q ss_pred             cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457            4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI   83 (371)
Q Consensus         4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~   83 (371)
                      .+...+++++.|.|+|+++|++||-.|+|+|..|..+++|.+...  +.|++||-|.+|+|+++|++|+++++||+|...
T Consensus        18 Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~--plPytpGmEaaGvVvAvG~gvtdrkvGDrVayl   95 (336)
T KOG1197|consen   18 GGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPA--PLPYTPGMEAAGVVVAVGEGVTDRKVGDRVAYL   95 (336)
T ss_pred             CCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCC--CCCcCCCcccceEEEEecCCccccccccEEEEe
Confidence            345568999999999999999999999999999999999999755  799999999999999999999999999999653


Q ss_pred             cCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhc
Q 017457           84 FHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL  163 (371)
Q Consensus        84 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~  163 (371)
                      ..                                                 .|.|+|++.+|...++++|+.+++.+||+
T Consensus        96 ~~-------------------------------------------------~g~yaee~~vP~~kv~~vpe~i~~k~aaa  126 (336)
T KOG1197|consen   96 NP-------------------------------------------------FGAYAEEVTVPSVKVFKVPEAITLKEAAA  126 (336)
T ss_pred             cc-------------------------------------------------chhhheeccccceeeccCCcccCHHHHHH
Confidence            21                                                 25999999999999999999999999999


Q ss_pred             cccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457          164 LSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT  242 (371)
Q Consensus       164 ~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~  242 (371)
                      +.+.++|||..+.+...+++|++||++.+ |++|+++.|++++.|+ ++|++.++++|.+.+++.|+.|.++++.   ++
T Consensus       127 ~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~h~I~y~~---eD  202 (336)
T KOG1197|consen  127 LLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAEHPIDYST---ED  202 (336)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCcceeeccc---hh
Confidence            99999999998888889999999999976 9999999999999999 9999999999999999999999999999   99


Q ss_pred             HHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCC-chh
Q 017457          243 VSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLK-PRS  319 (371)
Q Consensus       243 ~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~-~~~  319 (371)
                      +.+++.+.|+| |+|+++|++|... +...+.+|++. |.++.||..+ +..-+++...+.- .+++..-.+..+- ...
T Consensus       203 ~v~~V~kiTngKGVd~vyDsvG~dt-~~~sl~~Lk~~-G~mVSfG~as-gl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~  279 (336)
T KOG1197|consen  203 YVDEVKKITNGKGVDAVYDSVGKDT-FAKSLAALKPM-GKMVSFGNAS-GLIDPIPLNQLSPKALQLVRPSLLGYIDGEV  279 (336)
T ss_pred             HHHHHHhccCCCCceeeeccccchh-hHHHHHHhccC-ceEEEecccc-CCCCCeehhhcChhhhhhccHhhhcccCCHH
Confidence            99999999988 9999999999988 99999999998 9999999743 3333333333222 3333332222222 122


Q ss_pred             ----hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEeCc
Q 017457          320 ----DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDK  369 (371)
Q Consensus       320 ----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~~~  369 (371)
                          ...+++.++.+|.+.+.  |++.|||+++.+|+.++++.... |+++...+
T Consensus       280 el~~~v~rl~alvnsg~lk~~--I~~~ypls~vadA~~diesrktvGkvlLlp~~  332 (336)
T KOG1197|consen  280 ELVSYVARLFALVNSGHLKIH--IDHVYPLSKVADAHADIESRKTVGKVLLLPGP  332 (336)
T ss_pred             HHHHHHHHHHHHhhcCcccee--eeeecchHHHHHHHHHHHhhhccceEEEeCCc
Confidence                23578888889976655  89999999999999999997665 98887643

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=6e-45  Score=344.01  Aligned_cols=333  Identities=23%  Similarity=0.340  Sum_probs=270.3

Q ss_pred             ccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEee
Q 017457            3 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP   82 (371)
Q Consensus         3 ~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~   82 (371)
                      ..++..+++++++.|+|+++||+|||.++++|++|++.+.|.+...  .+|.++|||++|+|+++|+.+++|++||+|++
T Consensus        16 ~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~--~~p~i~G~E~~G~Vv~vG~~v~~~~~Gd~V~~   93 (357)
T PLN02514         16 RDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMS--NYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGV   93 (357)
T ss_pred             ecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcC--CCCccCCceeeEEEEEECCCcccccCCCEEEE
Confidence            4567779999999999999999999999999999999998876443  57889999999999999999999999999986


Q ss_pred             ccCC-CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchh
Q 017457           83 IFHR-DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA  161 (371)
Q Consensus        83 ~~~~-~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~a  161 (371)
                      .+.. .|++|.+|..+.++.|.........++ ..|              ....|+|+||+.++.+.++++|++++++++
T Consensus        94 ~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~-~~g--------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~a  158 (357)
T PLN02514         94 GVIVGCCGECSPCKSDLEQYCNKRIWSYNDVY-TDG--------------KPTQGGFASAMVVDQKFVVKIPEGMAPEQA  158 (357)
T ss_pred             cCccccCCCChhHhCCCcccCCCccccccccc-cCC--------------ccCCCccccEEEEchHHeEECCCCCCHHHh
Confidence            6544 699999999999999976532100000 001              011259999999999999999999999999


Q ss_pred             hccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCcceEEcCCCCCC
Q 017457          162 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDFINPATCGD  240 (371)
Q Consensus       162 a~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~~v~~~~~~~~  240 (371)
                      +.+++++.|||+++......++|++|+|+|+|++|++++|+||++|+ +|+++++++++++.+ +++|+++++++.+   
T Consensus       159 a~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~---  234 (357)
T PLN02514        159 APLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSDKKREEALEHLGADDYLVSSD---  234 (357)
T ss_pred             hhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhcCCcEEecCCC---
Confidence            99999999999987655556899999999889999999999999999 788888787776654 5699988876544   


Q ss_pred             ccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchh
Q 017457          241 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRS  319 (371)
Q Consensus       241 ~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~  319 (371)
                      .   ..+.+.+. ++|++||++|....++.++++++++ |+++.+|....  ..+++...++. ++++.|+....   ..
T Consensus       235 ~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~~~~~i~g~~~~~---~~  304 (357)
T PLN02514        235 A---AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLD-GKLILMGVINT--PLQFVTPMLMLGRKVITGSFIGS---MK  304 (357)
T ss_pred             h---HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccC-CEEEEECCCCC--CCcccHHHHhhCCcEEEEEecCC---HH
Confidence            2   23444443 7999999999776689999999998 99999997532  23455555544 88999986543   45


Q ss_pred             hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEeCc
Q 017457          320 DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDK  369 (371)
Q Consensus       320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~~~  369 (371)
                      +++++++++++|++.  +++ ++|+|+++++||+.+.+++.. |+++.++.
T Consensus       305 ~~~~~~~~~~~g~l~--~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~~~  352 (357)
T PLN02514        305 ETEEMLEFCKEKGLT--SMI-EVVKMDYVNTAFERLEKNDVRYRFVVDVAG  352 (357)
T ss_pred             HHHHHHHHHHhCCCc--CcE-EEEcHHHHHHHHHHHHcCCCceeEEEEccc
Confidence            789999999999754  445 689999999999999988775 99998754

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=1.1e-44  Score=341.92  Aligned_cols=329  Identities=27%  Similarity=0.471  Sum_probs=279.0

Q ss_pred             cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCC-CC--------CCCCCccccccccEEEEEeCCCCCCc
Q 017457            4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTD-LP--------KLPLPVIFGHEAVGVVESVGEYVEEV   74 (371)
Q Consensus         4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~-~~--------~~~~p~~~G~e~~G~Vv~vG~~v~~~   74 (371)
                      ...++++++++|.|+|.++||+||+.++++|++|++.+.+... ..        ...+|.++|||++|+|+++|+++++|
T Consensus         7 ~~~~~l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~   86 (351)
T cd08233           7 HGRKDIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEVGSGVTGF   86 (351)
T ss_pred             ecCCceEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEeCCCCCCC
Confidence            3345699999999999999999999999999999887654211 00        01368899999999999999999999


Q ss_pred             CCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCC-CCCccccccCCceeecccCcccccceeeeecceeEECC
Q 017457           75 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR-DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT  153 (371)
Q Consensus        75 ~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~-~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P  153 (371)
                      ++||+|++.+...|++|.+|..+.+++|.....   .|+.. .                   |+|++|+.++.+.++++|
T Consensus        87 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-------------------g~~a~~~~~~~~~~~~lP  144 (351)
T cd08233          87 KVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGF---IGLGGGG-------------------GGFAEYVVVPAYHVHKLP  144 (351)
T ss_pred             CCCCEEEECCCCCCCCChHHhCcCcccCCCCce---eccCCCC-------------------CceeeEEEechHHeEECc
Confidence            999999999989999999999999999976542   22221 2                   499999999999999999


Q ss_pred             CCCCcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEE
Q 017457          154 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI  233 (371)
Q Consensus       154 ~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~  233 (371)
                      +++++++++.+ .++.|||+++ ...++++|++|||+|+|++|++++|+|+.+|+++|+++++++++.+.++++|++.++
T Consensus       145 ~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i  222 (351)
T cd08233         145 DNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVL  222 (351)
T ss_pred             CCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEE
Confidence            99999998876 5788999976 778899999999999999999999999999997799999999999999999999999


Q ss_pred             cCCCCCCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEee
Q 017457          234 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTY  311 (371)
Q Consensus       234 ~~~~~~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~  311 (371)
                      ++++   .++.+.+++++++ ++|++||++|....+..++++++++ |+++.+|...  ....++...++. ++++.|..
T Consensus       223 ~~~~---~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~i~g~~  296 (351)
T cd08233         223 DPTE---VDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWE--KPISFNPNDLVLKEKTLTGSI  296 (351)
T ss_pred             CCCc---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-CEEEEEccCC--CCCccCHHHHHhhCcEEEEEe
Confidence            9887   7888889888887 7999999999766689999999998 9999999754  234556555554 78999875


Q ss_pred             ccCCCchhhHHHHHHHHHcCCCCCCCceeEEEecccH-HHHHHHHhcCce--eeEEE
Q 017457          312 FGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDI-NKAFDLLLEGKS--LRCII  365 (371)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~a~~~~~~~~~--~kvvv  365 (371)
                      ...   .+++++++++++++++.+.++++++|+++|+ ++|++.+.+++.  +|++|
T Consensus       297 ~~~---~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~  350 (351)
T cd08233         297 CYT---REDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV  350 (351)
T ss_pred             ccC---cchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence            432   3679999999999998877778899999996 799999988774  58886

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=6.1e-43  Score=331.48  Aligned_cols=352  Identities=32%  Similarity=0.613  Sum_probs=283.4

Q ss_pred             CCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccC
Q 017457            6 GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH   85 (371)
Q Consensus         6 ~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~   85 (371)
                      +..+++++.+.|++.++||+|||.++++|++|++...|.++ .  .+|.++|||++|+|+++|++++++++||+|++.+.
T Consensus        12 ~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~--~~p~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~   88 (365)
T cd08278          12 GGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-T--PLPAVLGHEGAGVVEAVGSAVTGLKPGDHVVLSFA   88 (365)
T ss_pred             CCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-C--CCCcccccceeEEEEEeCCCcccCCCCCEEEEccc
Confidence            45688999999999999999999999999999999988764 2  46789999999999999999999999999998764


Q ss_pred             CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceee-cccCcccccceeeeecceeEECCCCCCcchhhcc
Q 017457           86 RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIH-HFLNISSFTEYSVVDITHVVKITPHIPLGIACLL  164 (371)
Q Consensus        86 ~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~-~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~  164 (371)
                       .|+.|.+|..+.+++|.........|...+|-..+.+++|...+ ++...|+|++|+.+++++++++|+++++++++.+
T Consensus        89 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~~s~~~a~~l  167 (365)
T cd08278          89 -SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKDVPLELLAPL  167 (365)
T ss_pred             -CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECCCCCCHHHhhhh
Confidence             89999999999999997543210012111110000000000000 1223469999999999999999999999999999


Q ss_pred             ccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHH
Q 017457          165 SCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVS  244 (371)
Q Consensus       165 ~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~  244 (371)
                      ++++.||++++.....++++++|||+|+|++|++++|+|+++|+.+|+++++++++.+.++++|++.++++++   .++.
T Consensus       168 ~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~~~~---~~~~  244 (365)
T cd08278         168 GCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINPKE---EDLV  244 (365)
T ss_pred             cchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEecCCC---cCHH
Confidence            9999999998877888999999999988999999999999999977999999999999999999999998876   6788


Q ss_pred             HHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHH-hcCceEEEeeccCCCchhhHHH
Q 017457          245 QVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFGGLKPRSDIAT  323 (371)
Q Consensus       245 ~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~  323 (371)
                      +.+.+++++++|+++||+|+...+..++++++++ |+++.+|.........++...+ ..+.++.++........+.+++
T Consensus       245 ~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (365)
T cd08278         245 AAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGDSVPQEFIPR  323 (365)
T ss_pred             HHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccC-CEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCCcChHHHHHH
Confidence            8888888449999999999766689999999998 9999999643233445666665 4488888876544333456788


Q ss_pred             HHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEE
Q 017457          324 LAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIW  366 (371)
Q Consensus       324 ~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~  366 (371)
                      +++++.++++.+..++ ..|+++++++|++.+.+++..|++++
T Consensus       324 ~~~~l~~g~l~~~~~~-~~~~l~~~~~a~~~~~~~~~~k~~~~  365 (365)
T cd08278         324 LIELYRQGKFPFDKLV-TFYPFEDINQAIADSESGKVIKPVLR  365 (365)
T ss_pred             HHHHHHcCCCChHHhe-EEecHHHHHHHHHHHHCCCceEEEEC
Confidence            9999999987543445 68999999999999988877788863

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=4e-44  Score=336.33  Aligned_cols=317  Identities=20%  Similarity=0.249  Sum_probs=246.2

Q ss_pred             ccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCC--CCCCCccccccccEEEEEeCCCCCCcCCCCEE
Q 017457            3 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLP--KLPLPVIFGHEAVGVVESVGEYVEEVKERDLV   80 (371)
Q Consensus         3 ~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~--~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V   80 (371)
                      +.+.++++++++|.|+ +++||||||++++||++|+++++|.+...  ...+|.++|||++|+|+++|..  .|++||+|
T Consensus         8 ~~~~~~~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~~~vGdrV   84 (341)
T cd08237           8 LVRPKFFEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--TYKVGTKV   84 (341)
T ss_pred             EeccceEEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--ccCCCCEE
Confidence            3445569999999985 99999999999999999999999875321  1257999999999999998875  69999999


Q ss_pred             eeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcch
Q 017457           81 LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI  160 (371)
Q Consensus        81 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~  160 (371)
                      ++.+...|+ |..|  +..++|.....   .|...+                   |+|+||+++++++++++|+++++++
T Consensus        85 ~~~~~~~~~-~~~~--~~~~~c~~~~~---~g~~~~-------------------G~~aey~~v~~~~~~~vP~~l~~~~  139 (341)
T cd08237          85 VMVPNTPVE-KDEI--IPENYLPSSRF---RSSGYD-------------------GFMQDYVFLPPDRLVKLPDNVDPEV  139 (341)
T ss_pred             EECCCCCch-hccc--chhccCCCcce---eEecCC-------------------CceEEEEEEchHHeEECCCCCChHH
Confidence            998887787 4455  45678865442   233333                   3999999999999999999999998


Q ss_pred             hhccccchhhhHHHHHH--HcCCCCCCeEEEEcCChHHHHHHHHHHH-cCCCeEEEEcCChhHHHHHHHhCcceEEcCCC
Q 017457          161 ACLLSCGVSTGVGAAWK--VAGVEVGSTVAIFGLGAVGLAVAEGARL-NRASKIIGVDINPEKFEIGKKFGITDFINPAT  237 (371)
Q Consensus       161 aa~~~~~~~ta~~~l~~--~~~~~~g~~VLI~G~g~~G~~ai~la~~-~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~  237 (371)
                      |+.+. +++++++++..  ...+++|++|||+|+|++|++++|+|+. +|..+|++++++++|++.++++++++.++   
T Consensus       140 aa~~~-~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~---  215 (341)
T cd08237         140 AAFTE-LVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLID---  215 (341)
T ss_pred             hhhhc-hHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehh---
Confidence            87655 88889987643  2456889999999999999999999986 66558999999999999998766653321   


Q ss_pred             CCCccHHHHHHHhhCC-CcCEEEECCCC---hHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeec
Q 017457          238 CGDKTVSQVIKEMTDG-GADYCFECIGL---TSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYF  312 (371)
Q Consensus       238 ~~~~~~~~~i~~~~~g-g~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~  312 (371)
                          +       +... ++|+|||++|+   +..++.+++.++++ |+++.+|...  ...+++...++. ++++.|+..
T Consensus       216 ----~-------~~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~k~~~i~g~~~  281 (341)
T cd08237         216 ----D-------IPEDLAVDHAFECVGGRGSQSAINQIIDYIRPQ-GTIGLMGVSE--YPVPINTRMVLEKGLTLVGSSR  281 (341)
T ss_pred             ----h-------hhhccCCcEEEECCCCCccHHHHHHHHHhCcCC-cEEEEEeecC--CCcccCHHHHhhCceEEEEecc
Confidence                1       1122 79999999994   45689999999998 9999999642  234555555544 889998853


Q ss_pred             cCCCchhhHHHHHHHHHcC---CCCCCCceeEEEecc---cHHHHHHHHhcCceeeEEEEeC
Q 017457          313 GGLKPRSDIATLAQKYLDK---ELNLGEFITHEVSFH---DINKAFDLLLEGKSLRCIIWMD  368 (371)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~g---~~~~~~~~~~~~~~~---~~~~a~~~~~~~~~~kvvv~~~  368 (371)
                      ..   .++++++++++.++   +..+.++++++|+++   ++.++++...++..+|+++.++
T Consensus       282 ~~---~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~~~gKvvi~~~  340 (341)
T cd08237         282 ST---REDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTNSWGKTVMEWE  340 (341)
T ss_pred             cC---HHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhcCcceEEEEee
Confidence            32   46789999999998   335777889999985   5566665555544559999874

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=6.9e-43  Score=329.67  Aligned_cols=335  Identities=24%  Similarity=0.313  Sum_probs=274.7

Q ss_pred             CCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeecc
Q 017457            5 PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIF   84 (371)
Q Consensus         5 ~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~   84 (371)
                      +...+++++.+.|.+.++||+|||.++++|++|++...+.+...  .+|.++|||++|+|+++|+.++++++||+|++.+
T Consensus         8 ~~~~~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~--~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~   85 (351)
T cd08285           8 GIGKVGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGE--RHGMILGHEAVGVVEEVGSEVKDFKPGDRVIVPA   85 (351)
T ss_pred             cCCccEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCC--CCCcccCcceEEEEEEecCCcCccCCCCEEEEcC
Confidence            34458888999999999999999999999999999888775443  5688999999999999999999999999999988


Q ss_pred             CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecc--eeEECCCCCCcchhh
Q 017457           85 HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKITPHIPLGIAC  162 (371)
Q Consensus        85 ~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~~P~~l~~~~aa  162 (371)
                      ...|++|..|..+.++.|.....+...+...+                   |+|++|+.++.+  .++++|+++++++++
T Consensus        86 ~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~-------------------g~~~~y~~v~~~~~~~~~lP~~~~~~~aa  146 (351)
T cd08285          86 ITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKD-------------------GVFAEYFHVNDADANLAPLPDGLTDEQAV  146 (351)
T ss_pred             cCCCCCCHHHHCcCcccCcCCCCCccccCCCC-------------------cceeEEEEcchhhCceEECCCCCCHHHhh
Confidence            78999999999999999975421100111122                   499999999974  899999999999999


Q ss_pred             ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457          163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT  242 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~  242 (371)
                      .++..+.||+++ .....+++|++|||+|+|++|++++|+|+++|+.+|+++++++++.+.++++|+++++++++   .+
T Consensus       147 ~~~~~~~ta~~~-~~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~---~~  222 (351)
T cd08285         147 MLPDMMSTGFHG-AELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKN---GD  222 (351)
T ss_pred             hhccchhhHHHH-HHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCC---CC
Confidence            998899999997 46788999999999988999999999999999966999999999999999999999999877   67


Q ss_pred             HHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHH---hcCceEEEeeccCCCch
Q 017457          243 VSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI---LKGRSVCGTYFGGLKPR  318 (371)
Q Consensus       243 ~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~---~~~~~~~g~~~~~~~~~  318 (371)
                      +.+.+.+++.+ ++|++||++|+...+..++++++++ |+++.+|.........++...+   ....++.+.....  ..
T Consensus       223 ~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~  299 (351)
T cd08285         223 VVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPG--GR  299 (351)
T ss_pred             HHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCCCceeecChhhhhhhccccEEEEeecCC--cc
Confidence            88888888776 8999999999876689999999998 9999998754322334432222   2245565543211  23


Q ss_pred             hhHHHHHHHHHcCCCCCCCc-eeEEEecccHHHHHHHHhcCce--eeEEEEe
Q 017457          319 SDIATLAQKYLDKELNLGEF-ITHEVSFHDINKAFDLLLEGKS--LRCIIWM  367 (371)
Q Consensus       319 ~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~a~~~~~~~~~--~kvvv~~  367 (371)
                      ++++++++++.+|++.+..+ .++.++++++++||+.+.+++.  .|+++.+
T Consensus       300 ~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~  351 (351)
T cd08285         300 LRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF  351 (351)
T ss_pred             ccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence            57889999999999887443 4456999999999999988763  4999864

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK10083 putative oxidoreductase; Provisional

Probab=100.00  E-value=3.1e-42  Score=323.69  Aligned_cols=328  Identities=21%  Similarity=0.364  Sum_probs=270.1

Q ss_pred             cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457            4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI   83 (371)
Q Consensus         4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~   83 (371)
                      .+.+.+++++++.|+|.++||+||+.++++|++|++.+.|.++..  .+|.++|||++|+|+++|+.++.+++||+|++.
T Consensus         7 ~~~~~~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~--~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~   84 (339)
T PRK10083          7 EKPNSLAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFA--KYPRVIGHEFFGVIDAVGEGVDAARIGERVAVD   84 (339)
T ss_pred             ecCCeeEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcC--CCCcccccceEEEEEEECCCCccCCCCCEEEEc
Confidence            344568999999999999999999999999999999988876543  578899999999999999999999999999999


Q ss_pred             cCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhc
Q 017457           84 FHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL  163 (371)
Q Consensus        84 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~  163 (371)
                      +...|+.|.+|..+.+++|.....   .++..+                   |+|++|+.++.++++++|+++++++++ 
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~~~~~~~~~ip~~~~~~~a~-  141 (339)
T PRK10083         85 PVISCGHCYPCSIGKPNVCTSLVV---LGVHRD-------------------GGFSEYAVVPAKNAHRIPDAIADQYAV-  141 (339)
T ss_pred             cccCCCCCccccCcCcccCCCCce---EEEccC-------------------CcceeeEEechHHeEECcCCCCHHHHh-
Confidence            999999999999999999975542   222223                   489999999999999999999998876 


Q ss_pred             cccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHH-cCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457          164 LSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARL-NRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT  242 (371)
Q Consensus       164 ~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~-~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~  242 (371)
                      +...+.++++ +....++++|++|+|+|+|++|++++|+|++ +|++.|+++++++++.+.++++|+++++++++   .+
T Consensus       142 ~~~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~---~~  217 (339)
T PRK10083        142 MVEPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ---EP  217 (339)
T ss_pred             hhchHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc---cc
Confidence            4457788885 5677889999999999999999999999996 69966888999999999999999999998776   56


Q ss_pred             HHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhh
Q 017457          243 VSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSD  320 (371)
Q Consensus       243 ~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~  320 (371)
                      +.+.+..  .+ ++|++||++|+...+..++++++++ |+++.+|....  ...++...+.. ++++.+...    ..+.
T Consensus       218 ~~~~~~~--~g~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~----~~~~  288 (339)
T PRK10083        218 LGEALEE--KGIKPTLIIDAACHPSILEEAVTLASPA-ARIVLMGFSSE--PSEIVQQGITGKELSIFSSRL----NANK  288 (339)
T ss_pred             HHHHHhc--CCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC--CceecHHHHhhcceEEEEEec----Chhh
Confidence            6665533  23 5689999999776689999999998 99999996432  22333333333 666666542    2457


Q ss_pred             HHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCc-e-eeEEEEeCc
Q 017457          321 IATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGK-S-LRCIIWMDK  369 (371)
Q Consensus       321 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~-~kvvv~~~~  369 (371)
                      +++++++++++++.+..++++.|+++++++|++.+.++. . .|+++.+.+
T Consensus       289 ~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~  339 (339)
T PRK10083        289 FPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE  339 (339)
T ss_pred             HHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence            899999999998876555779999999999999987643 3 599998764

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=3.4e-42  Score=322.59  Aligned_cols=323  Identities=24%  Similarity=0.399  Sum_probs=273.4

Q ss_pred             cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457            4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI   83 (371)
Q Consensus         4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~   83 (371)
                      .++++++++++|.|++.++||+||+.++++|++|+..+.|..+..  .+|.++|||++|+|+++|+.++++++||+|++.
T Consensus         8 ~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~--~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~   85 (333)
T cd08296           8 EPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGL--SYPRVPGHEVVGRIDAVGEGVSRWKVGDRVGVG   85 (333)
T ss_pred             cCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCC--CCCcccCcceeEEEEEECCCCccCCCCCEEEec
Confidence            344679999999999999999999999999999999988865433  568899999999999999999999999999875


Q ss_pred             c-CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhh
Q 017457           84 F-HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC  162 (371)
Q Consensus        84 ~-~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa  162 (371)
                      + ...|+.|.+|..++++.|.....   .|+...|                   +|++|+.++.+.++++|+++++.+++
T Consensus        86 ~~~~~~~~~~~~~~g~~~~c~~~~~---~~~~~~g-------------------~~a~~~~v~~~~~~~lp~~~~~~~aa  143 (333)
T cd08296          86 WHGGHCGTCDACRRGDFVHCENGKV---TGVTRDG-------------------GYAEYMLAPAEALARIPDDLDAAEAA  143 (333)
T ss_pred             cccCCCCCChhhhCcCcccCCCCCc---cCcccCC-------------------cceeEEEEchhheEeCCCCCCHHHhh
Confidence            5 46799999999999999987653   3443333                   89999999999999999999999999


Q ss_pred             ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457          163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT  242 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~  242 (371)
                      .+++++.+||+++. ..+++++++|||+|+|++|++++++|+++|+ +|+++++++++++.++++|+++++++.+   .+
T Consensus       144 ~l~~~~~ta~~~~~-~~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~---~~  218 (333)
T cd08296         144 PLLCAGVTTFNALR-NSGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSK---ED  218 (333)
T ss_pred             hhhhhhHHHHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCCC---cc
Confidence            99999999999764 4589999999999999999999999999999 8999999999999999999999998877   56


Q ss_pred             HHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhhH
Q 017457          243 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDI  321 (371)
Q Consensus       243 ~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~  321 (371)
                      +.+.+.++  +++|+++|++|....+..++++++++ |+++.+|...  ...+++...++. ++++.++....   ..++
T Consensus       219 ~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~i~~~~~~~---~~~~  290 (333)
T cd08296         219 VAEALQEL--GGAKLILATAPNAKAISALVGGLAPR-GKLLILGAAG--EPVAVSPLQLIMGRKSIHGWPSGT---ALDS  290 (333)
T ss_pred             HHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccC-CEEEEEecCC--CCCCcCHHHHhhcccEEEEeCcCC---HHHH
Confidence            77777665  37999999987666689999999998 9999999743  234555554444 89999875332   4578


Q ss_pred             HHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEE
Q 017457          322 ATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW  366 (371)
Q Consensus       322 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~  366 (371)
                      +.++++++++++..  .+ +.|+++++++||+.+.+++.. |+|++
T Consensus       291 ~~~~~~~~~~~l~~--~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~  333 (333)
T cd08296         291 EDTLKFSALHGVRP--MV-ETFPLEKANEAYDRMMSGKARFRVVLT  333 (333)
T ss_pred             HHHHHHHHhCCCCc--eE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence            88999998886653  35 689999999999999988765 88763

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=2.4e-42  Score=331.96  Aligned_cols=326  Identities=21%  Similarity=0.254  Sum_probs=257.4

Q ss_pred             CCCCcEEEEEecCCCCCCeEEEEEeEeeccccccccc-ccCCC-C-C--CCCCCccccccccEEEEEeCCCCC-CcCCCC
Q 017457            5 PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFW-KSSTD-L-P--KLPLPVIFGHEAVGVVESVGEYVE-EVKERD   78 (371)
Q Consensus         5 ~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~-~g~~~-~-~--~~~~p~~~G~e~~G~Vv~vG~~v~-~~~~Gd   78 (371)
                      +...++++++|.|+|.++||+|||.+++||++|++.+ .|... . +  ...+|.++|||++|+|+++|++++ +|++||
T Consensus        10 ~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~vGd   89 (410)
T cd08238          10 GKGDLRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGKKWQGKYKPGQ   89 (410)
T ss_pred             cCCceEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCCCccCCCCCCC
Confidence            3446999999999999999999999999999999976 45421 1 0  014788999999999999999998 699999


Q ss_pred             EEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecc----eeEECCC
Q 017457           79 LVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT----HVVKITP  154 (371)
Q Consensus        79 ~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~----~~~~~P~  154 (371)
                      +|++.+...|+.|.+|..              .|+..+|                   +|+||+.++++    .++++|+
T Consensus        90 rV~~~~~~~c~~~~~c~~--------------~g~~~~G-------------------~~aey~~v~~~~~~~~~~~lP~  136 (410)
T cd08238          90 RFVIQPALILPDGPSCPG--------------YSYTYPG-------------------GLATYHIIPNEVMEQDCLLIYE  136 (410)
T ss_pred             EEEEcCCcCCCCCCCCCC--------------ccccCCC-------------------cceEEEEecHHhccCCeEECCC
Confidence            999999888999887721              2333334                   99999999987    6899999


Q ss_pred             CCCcchhhccc-c-chhhhHHHH--------HHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcC--CCeEEEEcCChhHH
Q 017457          155 HIPLGIACLLS-C-GVSTGVGAA--------WKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNR--ASKIIGVDINPEKF  221 (371)
Q Consensus       155 ~l~~~~aa~~~-~-~~~ta~~~l--------~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g--~~~Vi~~~~~~~~~  221 (371)
                      ++++++++.+. . ...+++.++        ....++++|++|+|+|+ |++|++++|+|+++|  +.+|++++++++|+
T Consensus       137 ~l~~~~aal~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~  216 (410)
T cd08238         137 GDGYAEASLVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERL  216 (410)
T ss_pred             CCCHHHHhhcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHH
Confidence            99999988652 1 112233322        24567899999999985 999999999999975  45799999999999


Q ss_pred             HHHHHh--------Ccc-eEEcCCCCCCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCC-
Q 017457          222 EIGKKF--------GIT-DFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH-  290 (371)
Q Consensus       222 ~~~~~l--------ga~-~v~~~~~~~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-  290 (371)
                      +.++++        |++ .++++.+  ..++.+.+++++++ ++|++||++|.+..++.++++++++ |+++.++.... 
T Consensus       217 ~~a~~~~~~~~~~~Ga~~~~i~~~~--~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~-G~~v~~~g~~~~  293 (410)
T cd08238         217 ARAQRLFPPEAASRGIELLYVNPAT--IDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPD-GCLNFFAGPVDK  293 (410)
T ss_pred             HHHHHhccccccccCceEEEECCCc--cccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccC-CeEEEEEccCCC
Confidence            999997        766 5677543  14677888888887 9999999999877799999999997 88777643221 


Q ss_pred             CCceecCHHHHhc-CceEEEeeccCCCchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEEeCc
Q 017457          291 GSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWMDK  369 (371)
Q Consensus       291 ~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~~~~  369 (371)
                      ....+++...++. ++++.|+....   ..+++++++++++|++.+.++++++|+|+++++|++.+..+..+|+++.++.
T Consensus       294 ~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~gKvvl~~~~  370 (410)
T cd08238         294 NFSAPLNFYNVHYNNTHYVGTSGGN---TDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLPGIPGGKKLIYTQK  370 (410)
T ss_pred             CccccccHHHhhhcCcEEEEeCCCC---HHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhhccCCceEEEECCC
Confidence            1224555555555 88999975332   4679999999999999988889999999999999999984444599998754

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=100.00  E-value=2e-41  Score=321.07  Aligned_cols=353  Identities=39%  Similarity=0.681  Sum_probs=285.1

Q ss_pred             cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457            4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI   83 (371)
Q Consensus         4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~   83 (371)
                      .++..++++++|.|++.++||+||+.++++|+.|.....|.++.   .+|.++|+|++|+|+++|++++.+++||+|++.
T Consensus         8 ~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~---~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~   84 (363)
T cd08279           8 EVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLPA---PLPAVLGHEGAGVVEEVGPGVTGVKPGDHVVLS   84 (363)
T ss_pred             cCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCCC---CCCccccccceEEEEEeCCCccccCCCCEEEEC
Confidence            34466899999999999999999999999999999988886652   467789999999999999999999999999999


Q ss_pred             cCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhc
Q 017457           84 FHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL  163 (371)
Q Consensus        84 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~  163 (371)
                      +...|++|.+|..+.++.|...... .+|...++..++.. -|.....+...|+|++|+.++++.++++|+++++++++.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~  162 (363)
T cd08279          85 WIPACGTCRYCSRGQPNLCDLGAGI-LGGQLPDGTRRFTA-DGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAAL  162 (363)
T ss_pred             CCCCCCCChhhcCCCcccCcccccc-cccccCCCcccccc-cCccccccccCccceeeEEeccccEEECCCCCChHHeeh
Confidence            9999999999999999999753210 01111111000000 000011112236999999999999999999999999999


Q ss_pred             cccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccH
Q 017457          164 LSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTV  243 (371)
Q Consensus       164 ~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~  243 (371)
                      +++++.+||+++....++.++++|||+|+|++|++++++|+++|+++|+++++++++.+.++++|++++++.+.   .++
T Consensus       163 ~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~---~~~  239 (363)
T cd08279         163 LGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASE---DDA  239 (363)
T ss_pred             hcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCC---ccH
Confidence            99999999998888888999999999988999999999999999955999999999999999999999998877   678


Q ss_pred             HHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhhH
Q 017457          244 SQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDI  321 (371)
Q Consensus       244 ~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~  321 (371)
                      ...+.+++.+ ++|++||++++......++++++++ |+++.+|.........++...+.. +..+.++.+......+.+
T Consensus       240 ~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (363)
T cd08279         240 VEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANPRRDI  318 (363)
T ss_pred             HHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcC-CeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcCcHHHH
Confidence            8888888765 8999999999766689999999998 999999864333345566666554 677787765444445778


Q ss_pred             HHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEE
Q 017457          322 ATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII  365 (371)
Q Consensus       322 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv  365 (371)
                      ++++++++++.+.+..++.++|+++++++|++.+.+++..|.|+
T Consensus       319 ~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~  362 (363)
T cd08279         319 PRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI  362 (363)
T ss_pred             HHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence            99999999998876655678999999999999998877665554

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.7e-41  Score=320.07  Aligned_cols=327  Identities=27%  Similarity=0.413  Sum_probs=270.6

Q ss_pred             CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCC-------CCCCCCccccccccEEEEEeCCCCC--CcCCC
Q 017457            7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-------PKLPLPVIFGHEAVGVVESVGEYVE--EVKER   77 (371)
Q Consensus         7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-------~~~~~p~~~G~e~~G~Vv~vG~~v~--~~~~G   77 (371)
                      .++++++.+.|+|.+++|+||+.++++|++|++...|....       ....+|.++|||++|+|+++|+.++  +|++|
T Consensus        10 ~~~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~~~G   89 (350)
T cd08256          10 QDYRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGEGAEERGVKVG   89 (350)
T ss_pred             CceEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCCCcccCCCCCC
Confidence            45999999999999999999999999999999988876311       0014677899999999999999999  89999


Q ss_pred             CEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecc-eeEECCCCC
Q 017457           78 DLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT-HVVKITPHI  156 (371)
Q Consensus        78 d~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~-~~~~~P~~l  156 (371)
                      |+|+..+...|++|++|..+.++.|.+...   +|+...                 ..|+|++|+.++++ .++++|+++
T Consensus        90 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~-----------------~~g~~~~~~~~~~~~~~~~lP~~~  149 (350)
T cd08256          90 DRVISEQIVPCWNCRFCNRGQYWMCQKHDL---YGFQNN-----------------VNGGMAEYMRFPKEAIVHKVPDDI  149 (350)
T ss_pred             CEEEECCcCCCCCChHHhCcCcccCcCccc---eeeccC-----------------CCCcceeeEEcccccceEECCCCC
Confidence            999999999999999999999999975431   333110                 12489999999988 678999999


Q ss_pred             CcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCC
Q 017457          157 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA  236 (371)
Q Consensus       157 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~  236 (371)
                      ++++++.+ .+++|+|+++ ...+++++++|||.|+|++|++++++|+++|+..++++++++++.+.++++|++++++++
T Consensus       150 ~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~  227 (350)
T cd08256         150 PPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPP  227 (350)
T ss_pred             CHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCC
Confidence            99999988 7999999976 778899999999977799999999999999986788899999999999999999999887


Q ss_pred             CCCCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHH--hcCceEEEeecc
Q 017457          237 TCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI--LKGRSVCGTYFG  313 (371)
Q Consensus       237 ~~~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~--~~~~~~~g~~~~  313 (371)
                      +   .++.+.+.+++++ ++|++||++|+...+..++++++++ |+++.+|.....  ..++...+  .+++++.++...
T Consensus       228 ~---~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~~i~~~~~~  301 (350)
T cd08256         228 E---VDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-GRFVEFSVFGDP--VTVDWSIIGDRKELDVLGSHLG  301 (350)
T ss_pred             C---cCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEccCCCC--CccChhHhhcccccEEEEeccC
Confidence            6   6788888888887 8999999999765588999999998 999999864322  23333333  236677776533


Q ss_pred             CCCchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEE
Q 017457          314 GLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII  365 (371)
Q Consensus       314 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv  365 (371)
                      .    ..+.+++++++++.+.+..++++.|+++++++|++.+.+++.. |+++
T Consensus       302 ~----~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~  350 (350)
T cd08256         302 P----YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL  350 (350)
T ss_pred             c----hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence            2    3588899999999887655467999999999999999887655 7763

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=100.00  E-value=1.7e-41  Score=319.70  Aligned_cols=333  Identities=29%  Similarity=0.429  Sum_probs=274.7

Q ss_pred             CCCCcEEEEEecCCC-CCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457            5 PGKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI   83 (371)
Q Consensus         5 ~~~~l~~~~~~~~~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~   83 (371)
                      ....+.+.+.|.|+| .++||+||+.++++|++|++.+.|.++..  .+|.++|+|++|+|+++|++++++++||+|++.
T Consensus         8 ~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~   85 (347)
T cd05278           8 GPGKIGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGA--KHGMILGHEFVGEVVEVGSDVKRLKPGDRVSVP   85 (347)
T ss_pred             cCCceEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCC--CCCceeccceEEEEEEECCCccccCCCCEEEec
Confidence            334588889999999 99999999999999999999988877654  678899999999999999999999999999999


Q ss_pred             cCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecc--eeEECCCCCCcchh
Q 017457           84 FHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKITPHIPLGIA  161 (371)
Q Consensus        84 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~~P~~l~~~~a  161 (371)
                      +...||.|.+|..+.+..|.........+...                   .|+|++|++++++  +++++|++++++++
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~g~~~~~~~v~~~~~~~~~lP~~~~~~~a  146 (347)
T cd05278          86 CITFCGRCRFCRRGYHAHCENGLWGWKLGNRI-------------------DGGQAEYVRVPYADMNLAKIPDGLPDEDA  146 (347)
T ss_pred             CCCCCCCChhHhCcCcccCcCCCcccccccCC-------------------CCeeeEEEEecchhCeEEECCCCCCHHHH
Confidence            99999999999999999997543210011111                   2499999999987  99999999999999


Q ss_pred             hccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCc
Q 017457          162 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK  241 (371)
Q Consensus       162 a~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~  241 (371)
                      +.+++++.|||+++ ...+++++++|||.|+|++|++++|+|+++|+.+|+++++++++.+.++++|+++++++++   .
T Consensus       147 a~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~---~  222 (347)
T cd05278         147 LMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKN---G  222 (347)
T ss_pred             hhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCc---c
Confidence            99999999999986 6788999999999888999999999999999657888888888999999999999998877   6


Q ss_pred             cHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCchhh
Q 017457          242 TVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSD  320 (371)
Q Consensus       242 ~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  320 (371)
                      ++.+.+++++++ ++|++||++++...+..++++++++ |+++.+|..............+..+.++.+.....   .+.
T Consensus       223 ~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  298 (347)
T cd05278         223 DIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPV---RAR  298 (347)
T ss_pred             hHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcC-CEEEEEcCCCCCcccCccchhhhceeEEEeeccCc---hhH
Confidence            788888888776 8999999999855589999999998 99999986432211112222233467777654322   457


Q ss_pred             HHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCce-e-eEEEE
Q 017457          321 IATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS-L-RCIIW  366 (371)
Q Consensus       321 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~-kvvv~  366 (371)
                      +++++++++++.+.+...+...++++++++|++.+.+++. . |++++
T Consensus       299 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~  346 (347)
T cd05278         299 MPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIR  346 (347)
T ss_pred             HHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEec
Confidence            8899999999988765545688999999999999887765 3 88765

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=4.4e-41  Score=315.98  Aligned_cols=325  Identities=28%  Similarity=0.449  Sum_probs=277.0

Q ss_pred             CCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCC-CCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457            5 PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-PKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI   83 (371)
Q Consensus         5 ~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~   83 (371)
                      ++..+++.+.+.|++++++|+||+.++++|++|+....|.++. ....+|.++|+|++|+|+++|+++++|++||+|++.
T Consensus         9 ~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~   88 (340)
T cd05284           9 YGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLKEGDPVVVH   88 (340)
T ss_pred             CCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCcCCCEEEEc
Confidence            4467888899999999999999999999999999998887653 222678899999999999999999999999999999


Q ss_pred             cCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhc
Q 017457           84 FHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL  163 (371)
Q Consensus        84 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~  163 (371)
                      +...|+.|..|..+.+++|.....   .|+...|                   +|++|+.+++++++++|+++++++++.
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~P~~ls~~~aa~  146 (340)
T cd05284          89 PPWGCGTCRYCRRGEENYCENARF---PGIGTDG-------------------GFAEYLLVPSRRLVKLPRGLDPVEAAP  146 (340)
T ss_pred             CCCCCCCChHHhCcCcccCCCCcc---cCccCCC-------------------cceeeEEecHHHeEECCCCCCHHHhhh
Confidence            999999999999999999987765   4544444                   999999999999999999999999999


Q ss_pred             cccchhhhHHHHHHH-cCCCCCCeEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCc
Q 017457          164 LSCGVSTGVGAAWKV-AGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKKFGITDFINPATCGDK  241 (371)
Q Consensus       164 ~~~~~~ta~~~l~~~-~~~~~g~~VLI~G~g~~G~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~  241 (371)
                      +++.+.|||+++... ..+.++++|||+|+|++|++++++|+.+| . +|+++.+++++.+.++++|++++++++.   .
T Consensus       147 l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~  222 (340)
T cd05284         147 LADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVLNASD---D  222 (340)
T ss_pred             hcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEEcCCc---c
Confidence            999999999987665 46889999999999889999999999999 6 8999998999999999999999999877   4


Q ss_pred             cHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHH-HhcCceEEEeeccCCCchh
Q 017457          242 TVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGTYFGGLKPRS  319 (371)
Q Consensus       242 ~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~  319 (371)
                       +.+.+.+++++ ++|+++|++|+......++++++++ |+++.+|....   ..++... +.+++++.++...   ...
T Consensus       223 -~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~---~~~~~~~~~~~~~~~~~~~~~---~~~  294 (340)
T cd05284         223 -VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGGH---GRLPTSDLVPTEISVIGSLWG---TRA  294 (340)
T ss_pred             -HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEEcCCCC---CccCHHHhhhcceEEEEEecc---cHH
Confidence             78888888877 8999999999866689999999998 99999986432   2333333 3347888877533   246


Q ss_pred             hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEE
Q 017457          320 DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW  366 (371)
Q Consensus       320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~  366 (371)
                      .+++++++++++.+.+  .+ +.|+++++++|++.+.+++.. |+++.
T Consensus       295 ~~~~~~~~l~~g~l~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvv~~  339 (340)
T cd05284         295 ELVEVVALAESGKVKV--EI-TKFPLEDANEALDRLREGRVTGRAVLV  339 (340)
T ss_pred             HHHHHHHHHHhCCCCc--ce-EEEeHHHHHHHHHHHHcCCccceEEec
Confidence            7889999999997764  34 689999999999999887665 88765

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=100.00  E-value=4.9e-41  Score=320.65  Aligned_cols=345  Identities=26%  Similarity=0.371  Sum_probs=277.0

Q ss_pred             cCCCCcEEEEEecCCC-CCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEee
Q 017457            4 IPGKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP   82 (371)
Q Consensus         4 ~~~~~l~~~~~~~~~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~   82 (371)
                      .+...++++++|.|.| ++++|+||+.++++|++|+..+.|.++..  .+|.++|||++|+|+++|+.++++++||+|++
T Consensus         7 ~~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~--~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~   84 (386)
T cd08283           7 HGKGDVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGM--KKGDILGHEFMGVVEEVGPEVRNLKVGDRVVV   84 (386)
T ss_pred             ecCCCceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCC--CCCccccccceEEEEEeCCCCCCCCCCCEEEE
Confidence            3445689999999988 49999999999999999999999987654  57889999999999999999999999999999


Q ss_pred             ccCCCCCCCccccCCCCCCCCCCCCCC----CCCCCCCCCccccccCCceeecc-cCcccccceeeeecc--eeEECCCC
Q 017457           83 IFHRDCGECRDCKSSKSNTCSKFGRGY----RPNMPRDGTSRFRELKGDVIHHF-LNISSFTEYSVVDIT--HVVKITPH  155 (371)
Q Consensus        83 ~~~~~~~~c~~~~~~~~~~~~~~~~~~----~~g~~~~g~~~~~~~~~~~~~~~-~~~g~~a~~~~v~~~--~~~~~P~~  155 (371)
                      .+...||+|.+|..+.++.|+......    .+|....|      ..| ..+-+ ...|+|++|+.++++  .++++|++
T Consensus        85 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~-~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~  157 (386)
T cd08283          85 PFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAG------IFG-YSHLTGGYAGGQAEYVRVPFADVGPFKIPDD  157 (386)
T ss_pred             cCcCCCCCChhhcCCCcccCCCccccccccccccccccc------ccc-cccccCCCCCeeEEEEEcccccCeEEECCCC
Confidence            998899999999999999998643210    00110000      000 00000 013599999999988  89999999


Q ss_pred             CCcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcC
Q 017457          156 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP  235 (371)
Q Consensus       156 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~  235 (371)
                      +++.+++.+++.++|||+++ ...++++|++|||+|+|++|++++++|+++|+.+|+++++++++.+.+++++...++++
T Consensus       158 ~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi~~  236 (386)
T cd08283         158 LSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETINF  236 (386)
T ss_pred             CCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEEcC
Confidence            99999999999999999987 77889999999999889999999999999998569999999999999999844467776


Q ss_pred             CCCCCc-cHHHHHHHhhCC-CcCEEEECCCCh---------------------HHHHHHHHHhhcCCceEEEECccCCCC
Q 017457          236 ATCGDK-TVSQVIKEMTDG-GADYCFECIGLT---------------------SVMNDAFNSSREGWGKTVILGVEMHGS  292 (371)
Q Consensus       236 ~~~~~~-~~~~~i~~~~~g-g~d~vid~~g~~---------------------~~~~~~~~~l~~~~G~~v~~g~~~~~~  292 (371)
                      ..   . ++.+.+.+++++ ++|++||++|+.                     ..+..++++++++ |+++.+|..... 
T Consensus       237 ~~---~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~g~~~~~-  311 (386)
T cd08283         237 EE---VDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKG-GTVSIIGVYGGT-  311 (386)
T ss_pred             Cc---chHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccC-CEEEEEcCCCCC-
Confidence            65   4 478888888877 899999999753                     3478899999998 999999874332 


Q ss_pred             ceecCHHHHh-cCceEEEeeccCCCchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCc-e-eeEEEE
Q 017457          293 PISLNSIEIL-KGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGK-S-LRCIIW  366 (371)
Q Consensus       293 ~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~-~kvvv~  366 (371)
                      ...++...++ ++.++.+....   ..+.++++++++.++++....++++.|+++++++|++.+.+++ . +|++++
T Consensus       312 ~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~  385 (386)
T cd08283         312 VNKFPIGAAMNKGLTLRMGQTH---VQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLK  385 (386)
T ss_pred             cCccCHHHHHhCCcEEEeccCC---chHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEec
Confidence            2334443333 47888876422   2457889999999998876666778999999999999988876 3 499885

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=1.5e-41  Score=314.48  Aligned_cols=298  Identities=17%  Similarity=0.217  Sum_probs=232.3

Q ss_pred             ccCCCCcEEEEEecCCCCCCeEEEEEeEeecc-cccccccccCCCCCC-CCCCccccccccEEEEEeCCCCCCcCCCCEE
Q 017457            3 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLC-HSDVTFWKSSTDLPK-LPLPVIFGHEAVGVVESVGEYVEEVKERDLV   80 (371)
Q Consensus         3 ~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~-~~D~~~~~g~~~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V   80 (371)
                      +.+.+.+++++.|.|+|+++||+|||++++|| ++|++.+.|.++... ..+|.++|||++|+|+++|+++ +|++||+|
T Consensus         7 ~~~~~~l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~~~vGdrV   85 (308)
T TIGR01202         7 LSGPNQIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-GFRPGDRV   85 (308)
T ss_pred             EeCCCeEEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-CCCCCCEE
Confidence            34455699999999999999999999999996 699998888764321 2579999999999999999998 69999999


Q ss_pred             eeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcch
Q 017457           81 LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI  160 (371)
Q Consensus        81 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~  160 (371)
                      ++.    |..|.+|..               |  ..                   |+|+||+.++++.++++|++++++.
T Consensus        86 ~~~----~~~c~~~~~---------------~--~~-------------------G~~aey~~v~~~~~~~ip~~~~~~~  125 (308)
T TIGR01202        86 FVP----GSNCYEDVR---------------G--LF-------------------GGASKRLVTPASRVCRLDPALGPQG  125 (308)
T ss_pred             EEe----Ccccccccc---------------c--cC-------------------CcccceEEcCHHHceeCCCCCCHHH
Confidence            873    223433211               0  11                   4999999999999999999999864


Q ss_pred             hhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCC
Q 017457          161 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD  240 (371)
Q Consensus       161 aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~  240 (371)
                       +.++ .+.|||+++.. . ..++++|||+|+|++|++++|+||++|++.|++++.++++++.+..   ..++|+.+   
T Consensus       126 -a~~~-~~~~a~~~~~~-~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~---~~~i~~~~---  195 (308)
T TIGR01202       126 -ALLA-LAATARHAVAG-A-EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATG---YEVLDPEK---  195 (308)
T ss_pred             -Hhhh-HHHHHHHHHHh-c-ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhh---ccccChhh---
Confidence             4454 57899997643 3 3468899999999999999999999999667777877777766544   34555432   


Q ss_pred             ccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchh
Q 017457          241 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRS  319 (371)
Q Consensus       241 ~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~  319 (371)
                      .         .+.++|++|||+|+...++.++++++++ |+++.+|....  ...++...++. ++++.++....   .+
T Consensus       196 ~---------~~~g~Dvvid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~~~~~i~~~~~~~---~~  260 (308)
T TIGR01202       196 D---------PRRDYRAIYDASGDPSLIDTLVRRLAKG-GEIVLAGFYTE--PVNFDFVPAFMKEARLRIAAEWQ---PG  260 (308)
T ss_pred             c---------cCCCCCEEEECCCCHHHHHHHHHhhhcC-cEEEEEeecCC--CcccccchhhhcceEEEEecccc---hh
Confidence            1         1238999999999987689999999998 99999997432  23444444443 77888764322   46


Q ss_pred             hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCce-eeEEEE
Q 017457          320 DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS-LRCIIW  366 (371)
Q Consensus       320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvv~  366 (371)
                      +++++++++++|++.+.++++++|+|+|+++|++.+.++.. +|+++.
T Consensus       261 ~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~  308 (308)
T TIGR01202       261 DLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD  308 (308)
T ss_pred             HHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence            79999999999999988889999999999999998876544 588873

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=1.1e-40  Score=313.81  Aligned_cols=329  Identities=28%  Similarity=0.395  Sum_probs=276.9

Q ss_pred             CCCcEEEEEecCCC-CCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeecc
Q 017457            6 GKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIF   84 (371)
Q Consensus         6 ~~~l~~~~~~~~~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~   84 (371)
                      ...+++++.|.|+| .++||+||++++++|+.|+..+.|.++..  .+|.++|||++|+|+++|++++++++||+|++.+
T Consensus         9 ~~~~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~   86 (345)
T cd08286           9 PGKISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTV--TPGRILGHEGVGVVEEVGSAVTNFKVGDRVLISC   86 (345)
T ss_pred             CCceeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCC--CCCceecccceEEEEEeccCccccCCCCEEEECC
Confidence            34588999999886 89999999999999999999998876544  4578999999999999999999999999999999


Q ss_pred             CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecc--eeEECCCCCCcchhh
Q 017457           85 HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKITPHIPLGIAC  162 (371)
Q Consensus        85 ~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~~P~~l~~~~aa  162 (371)
                      ...|++|.+|..+..+.|......  .|...+                   |+|++|+.++.+  .++++|+++++.+++
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-------------------g~~~~~~~v~~~~~~~~~lp~~~~~~~aa  145 (345)
T cd08286          87 ISSCGTCGYCRKGLYSHCESGGWI--LGNLID-------------------GTQAEYVRIPHADNSLYKLPEGVDEEAAV  145 (345)
T ss_pred             cCCCCCChHHHCcCcccCCCcccc--cccccC-------------------CeeeeEEEcccccCceEECCCCCCHHHhh
Confidence            999999999999988888765421  122222                   499999999987  899999999999999


Q ss_pred             ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457          163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT  242 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~  242 (371)
                      .+++.+++||+++....+++++++|||.|+|++|++++|+|+++|..+|+++++++++.+.++++|++.++++++   .+
T Consensus       146 ~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~---~~  222 (345)
T cd08286         146 MLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAK---GD  222 (345)
T ss_pred             hccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecccc---cc
Confidence            999999999987777788999999999988999999999999999438999998999999999999999999876   67


Q ss_pred             HHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHh-cCceEEEeeccCCCchhh
Q 017457          243 VSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGGLKPRSD  320 (371)
Q Consensus       243 ~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~  320 (371)
                      +.+.+.+++++ ++|++||++++...+..++++++++ |+++.+|....  ...++...++ ++.++.+....    ...
T Consensus       223 ~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~----~~~  295 (345)
T cd08286         223 AIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPG-GHIANVGVHGK--PVDLHLEKLWIKNITITTGLVD----TNT  295 (345)
T ss_pred             HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-cEEEEecccCC--CCCcCHHHHhhcCcEEEeecCc----hhh
Confidence            88888888877 8999999999877689999999998 99999986322  2445555544 47888775322    245


Q ss_pred             HHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcC---ceeeEEEEe
Q 017457          321 IATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEG---KSLRCIIWM  367 (371)
Q Consensus       321 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~---~~~kvvv~~  367 (371)
                      +++++++++++.+.+.++++++|++++++++++.+.+.   ...|+++++
T Consensus       296 ~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~  345 (345)
T cd08286         296 TPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF  345 (345)
T ss_pred             HHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence            78899999999887666667999999999999998875   345999864

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=1.7e-40  Score=313.27  Aligned_cols=331  Identities=28%  Similarity=0.435  Sum_probs=274.2

Q ss_pred             cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCC----------CCCCCCccccccccEEEEEeCCCCCC
Q 017457            4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL----------PKLPLPVIFGHEAVGVVESVGEYVEE   73 (371)
Q Consensus         4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~----------~~~~~p~~~G~e~~G~Vv~vG~~v~~   73 (371)
                      .++.+++++++|.|++.++||+||+.++++|++|++...|.++.          ....+|.++|+|++|+|+++|+++++
T Consensus         8 ~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~   87 (350)
T cd08240           8 EPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVAVGPDAAD   87 (350)
T ss_pred             cCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEeeCCCCCC
Confidence            44556899999999999999999999999999999998876532          01145678999999999999999999


Q ss_pred             cCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECC
Q 017457           74 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT  153 (371)
Q Consensus        74 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P  153 (371)
                      +++||+|++.+...|+.|.+|..+.++.|.....   .|....                   |+|++|+.++.+.++++|
T Consensus        88 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~~~~~~~~~~p  145 (350)
T cd08240          88 VKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRA---LGIFQD-------------------GGYAEYVIVPHSRYLVDP  145 (350)
T ss_pred             CCCCCEEEECCcCCCCCChHHHCcCcccCCCCCc---eeeecc-------------------CcceeeEEecHHHeeeCC
Confidence            9999999999999999999999999999976542   222222                   489999999999999999


Q ss_pred             CCCCcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEE
Q 017457          154 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI  233 (371)
Q Consensus       154 ~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~  233 (371)
                      +++++.+++.+.+.+.|||+++.....++++++|||+|+|++|++++|+|+++|+++|+++++++++.+.++++|++.++
T Consensus       146 ~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~  225 (350)
T cd08240         146 GGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVV  225 (350)
T ss_pred             CCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEe
Confidence            99999999999999999999876666667899999998899999999999999997789999999999999999999888


Q ss_pred             cCCCCCCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeecc
Q 017457          234 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFG  313 (371)
Q Consensus       234 ~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~  313 (371)
                      +.++   .++.+.+.+..++++|++||++|....+..++++|+++ |+++.+|............. .+.+.++.+....
T Consensus       226 ~~~~---~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~~~  300 (350)
T cd08240         226 NGSD---PDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGGEATLPLPLL-PLRALTIQGSYVG  300 (350)
T ss_pred             cCCC---ccHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCCCCCcccHHHH-hhcCcEEEEcccC
Confidence            8766   56777777776668999999999766689999999998 99999987443222222222 2347788876543


Q ss_pred             CCCchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEE
Q 017457          314 GLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW  366 (371)
Q Consensus       314 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~  366 (371)
                      .   .+++.+++++++++.+...  ....|+++++++|++.+.+++.. |+++.
T Consensus       301 ~---~~~~~~~~~ll~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  349 (350)
T cd08240         301 S---LEELRELVALAKAGKLKPI--PLTERPLSDVNDALDDLKAGKVVGRAVLK  349 (350)
T ss_pred             C---HHHHHHHHHHHHcCCCccc--eeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence            3   3678889999999977643  45789999999999999887654 88764

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=2.5e-40  Score=316.84  Aligned_cols=328  Identities=17%  Similarity=0.187  Sum_probs=267.3

Q ss_pred             CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCC--------CCCCCCccccccccEEEEEeCCCCCCcCCCCE
Q 017457            8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL--------PKLPLPVIFGHEAVGVVESVGEYVEEVKERDL   79 (371)
Q Consensus         8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~--------~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~   79 (371)
                      .+++++.|.|+++++||+||+.++++|++|++...|....        .....+.++|||++|+|+++|++++.+++||+
T Consensus        29 ~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~  108 (393)
T cd08246          29 AIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSDASGIVWAVGEGVKNWKVGDE  108 (393)
T ss_pred             ceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccceEEEEEEeCCCCCcCCCCCE
Confidence            4788899999999999999999999999999887765210        00012358899999999999999999999999


Q ss_pred             EeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcc
Q 017457           80 VLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLG  159 (371)
Q Consensus        80 V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~  159 (371)
                      |++.+...|+.|..|..+.+++|.....   +|+...                  .|+|++|+.++..+++++|++++++
T Consensus       109 V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~~~------------------~g~~a~y~~v~~~~l~~iP~~l~~~  167 (393)
T cd08246         109 VVVHCSVWDGNDPERAGGDPMFDPSQRI---WGYETN------------------YGSFAQFALVQATQLMPKPKHLSWE  167 (393)
T ss_pred             EEEeccccccCccccccccccccccccc---ccccCC------------------CCcceeEEEechHHeEECCCCCCHH
Confidence            9999999999999999999999975432   343211                  2499999999999999999999999


Q ss_pred             hhhccccchhhhHHHHHHH--cCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCC
Q 017457          160 IACLLSCGVSTGVGAAWKV--AGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA  236 (371)
Q Consensus       160 ~aa~~~~~~~ta~~~l~~~--~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~  236 (371)
                      +++.+++.+.|||+++...  ++++++++|||+|+ |++|++++++|+++|+ +++++++++++++.++++|++++++++
T Consensus       168 ~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~vv~~~~s~~~~~~~~~~G~~~~i~~~  246 (393)
T cd08246         168 EAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NPVAVVSSEEKAEYCRALGAEGVINRR  246 (393)
T ss_pred             HHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCCEEEccc
Confidence            9999999999999987654  67899999999997 9999999999999999 788888899999999999999999864


Q ss_pred             CCC-------------------CccHHHHHHHhhCC--CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCcee
Q 017457          237 TCG-------------------DKTVSQVIKEMTDG--GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS  295 (371)
Q Consensus       237 ~~~-------------------~~~~~~~i~~~~~g--g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~  295 (371)
                      +.+                   ...+.+.+.+++++  ++|++||++|+.. +..++++++++ |+++.+|.... ....
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~-~~~~  323 (393)
T cd08246         247 DFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRAT-FPTSVFVCDRG-GMVVICAGTTG-YNHT  323 (393)
T ss_pred             ccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHh-HHHHHHHhccC-CEEEEEcccCC-CCCC
Confidence            410                   01356778888876  7999999999855 89999999998 99999986432 2233


Q ss_pred             cCHHHHhc-CceEEEeeccCCCchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcC-cee-eEEE
Q 017457          296 LNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEG-KSL-RCII  365 (371)
Q Consensus       296 ~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~-kvvv  365 (371)
                      ++...+.. +.++.++....   .+++.+++++++++.+..  .+++.|+++++++|++.+.++ +.. |+++
T Consensus       324 ~~~~~l~~~~~~i~g~~~~~---~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~a~~~~~~~~~~~gkvvv  391 (393)
T cd08246         324 YDNRYLWMRQKRIQGSHFAN---DREAAEANRLVMKGRIDP--CLSKVFSLDETPDAHQLMHRNQHHVGNMAV  391 (393)
T ss_pred             CcHHHHhhheeEEEecccCc---HHHHHHHHHHHHcCCcee--eeeEEEeHHHHHHHHHHHHhCccccceEEE
Confidence            44444444 77788775433   357888999999997653  367899999999999999887 554 7765

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=4.3e-40  Score=309.88  Aligned_cols=331  Identities=25%  Similarity=0.414  Sum_probs=278.1

Q ss_pred             cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457            4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI   83 (371)
Q Consensus         4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~   83 (371)
                      +.+.++++++.|.|.+.+++|+||+.++++|++|+....|..+..  .+|.++|+|++|+|+++|++++.+++||+|++.
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~V~~~G~~~~~~~~Gd~V~~~   85 (345)
T cd08260           8 EFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDV--TLPHVPGHEFAGVVVEVGEDVSRWRVGDRVTVP   85 (345)
T ss_pred             cCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCC--CCCeeeccceeEEEEEECCCCccCCCCCEEEEC
Confidence            344568899999999999999999999999999999988876544  668899999999999999999999999999886


Q ss_pred             cCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecc--eeEECCCCCCcchh
Q 017457           84 FHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKITPHIPLGIA  161 (371)
Q Consensus        84 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~~P~~l~~~~a  161 (371)
                      +...|++|.+|..+..++|.....   .++...                   |+|++|+.+++.  +++++|++++++++
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~v~~~~~~~~~iP~~~~~~~a  143 (345)
T cd08260          86 FVLGCGTCPYCRAGDSNVCEHQVQ---PGFTHP-------------------GSFAEYVAVPRADVNLVRLPDDVDFVTA  143 (345)
T ss_pred             CCCCCCCCccccCcCcccCCCCcc---cccCCC-------------------CcceeEEEcccccCceEECCCCCCHHHh
Confidence            667899999999999999997542   333333                   389999999975  89999999999999


Q ss_pred             hccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCc
Q 017457          162 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK  241 (371)
Q Consensus       162 a~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~  241 (371)
                      +.+++.+.|||+++....++.++++|||+|+|++|++++++|+++|+ +|+++.+++++.+.++++|+++++++++  ..
T Consensus       144 a~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~--~~  220 (345)
T cd08260         144 AGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNASE--VE  220 (345)
T ss_pred             hhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEcccc--ch
Confidence            99999999999987777889999999999999999999999999999 8999999999999999999999988653  13


Q ss_pred             cHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCc-eecCHHHH-hcCceEEEeeccCCCchh
Q 017457          242 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP-ISLNSIEI-LKGRSVCGTYFGGLKPRS  319 (371)
Q Consensus       242 ~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~-~~~~~~~~-~~~~~~~g~~~~~~~~~~  319 (371)
                      ++.+.+.++..+++|++||++|+...+...+++++++ |+++.+|....... ..++...+ .++.++.+....   ..+
T Consensus       221 ~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  296 (345)
T cd08260         221 DVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGM---PAH  296 (345)
T ss_pred             hHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcC---CHH
Confidence            6777777777668999999999755588999999998 99999986433221 34455545 337788876532   246


Q ss_pred             hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEE
Q 017457          320 DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII  365 (371)
Q Consensus       320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv  365 (371)
                      .+++++++++++++.+...+++.++++++++|++.+.+++.. |+++
T Consensus       297 ~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~  343 (345)
T cd08260         297 RYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVI  343 (345)
T ss_pred             HHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEe
Confidence            788999999999887655567999999999999999887665 7765

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.2e-40  Score=314.91  Aligned_cols=330  Identities=25%  Similarity=0.375  Sum_probs=267.8

Q ss_pred             CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCC------CCCCCCCCccccccccEEEEEeCCCCCCcCCCCEE
Q 017457            7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSST------DLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLV   80 (371)
Q Consensus         7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~------~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V   80 (371)
                      ..+++++.|.|+++++||+||+.++++|++|++.+.+..      +.. ..+|.++|||++|+|+++|+++++|++||+|
T Consensus        37 ~~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V  115 (384)
T cd08265          37 PELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGL-TEFPVVIGHEFSGVVEKTGKNVKNFEKGDPV  115 (384)
T ss_pred             CCEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcc-cCCCcccccceEEEEEEECCCCCCCCCCCEE
Confidence            468999999999999999999999999999998876321      111 1567899999999999999999999999999


Q ss_pred             eeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCC----
Q 017457           81 LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI----  156 (371)
Q Consensus        81 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l----  156 (371)
                      ++.+..+|+.|+.|..+.+++|.....   .|+..+|                   +|++|+.++++.++++|+++    
T Consensus       116 ~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~~~g-------------------~~~~~v~v~~~~~~~lP~~~~~~~  173 (384)
T cd08265         116 TAEEMMWCGMCRACRSGSPNHCKNLKE---LGFSADG-------------------AFAEYIAVNARYAWEINELREIYS  173 (384)
T ss_pred             EECCCCCCCCChhhhCcCcccCCCcce---eeecCCC-------------------cceeeEEechHHeEECCccccccc
Confidence            999999999999999999999986553   4443344                   89999999999999999864    


Q ss_pred             ---CcchhhccccchhhhHHHHHHH-cCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceE
Q 017457          157 ---PLGIACLLSCGVSTGVGAAWKV-AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF  232 (371)
Q Consensus       157 ---~~~~aa~~~~~~~ta~~~l~~~-~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v  232 (371)
                         ++. ++++..++++||+++... .++++|++|||+|+|++|++++++|+++|+++|+++++++++.+.++++|++++
T Consensus       174 ~~~~~~-~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~  252 (384)
T cd08265         174 EDKAFE-AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYV  252 (384)
T ss_pred             cCCCHH-HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEE
Confidence               444 555666889999987666 689999999999889999999999999999779999989999999999999999


Q ss_pred             EcCCCCCCccHHHHHHHhhCC-CcCEEEECCCCh-HHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEE
Q 017457          233 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLT-SVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCG  309 (371)
Q Consensus       233 ~~~~~~~~~~~~~~i~~~~~g-g~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g  309 (371)
                      +++++....++.+.+.+++++ ++|+++|++|+. ..+..++++++++ |+++.+|....  ...++...+.. +.++.+
T Consensus       253 v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~l~~  329 (384)
T cd08265         253 FNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN-GKIVYIGRAAT--TVPLHLEVLQVRRAQIVG  329 (384)
T ss_pred             EcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC-CEEEEECCCCC--CCcccHHHHhhCceEEEE
Confidence            987751123788888888887 999999999973 3478999999998 99999986432  23333333333 567776


Q ss_pred             eeccCCCchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEE
Q 017457          310 TYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII  365 (371)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv  365 (371)
                      .....  ....+++++++++++.+.+..++++.|+++++++|++...++...|+++
T Consensus       330 ~~~~~--~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv  383 (384)
T cd08265         330 AQGHS--GHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASERTDGKITI  383 (384)
T ss_pred             eeccC--CcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEe
Confidence            64221  1346889999999998876555678999999999999976665457764

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=100.00  E-value=5.5e-40  Score=308.70  Aligned_cols=331  Identities=26%  Similarity=0.426  Sum_probs=267.6

Q ss_pred             cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCC-CCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEee
Q 017457            4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSST-DLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP   82 (371)
Q Consensus         4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~-~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~   82 (371)
                      +++.++++.+.|.|+|+++||+||++++++|++|+.++.+.. ......+|.++|||++|+|+++|++++.+++||+|++
T Consensus         8 ~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~   87 (341)
T PRK05396          8 KAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFKVGDRVSG   87 (341)
T ss_pred             cCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCCCCCEEEE
Confidence            455679999999999999999999999999999998776532 1111246778999999999999999999999999999


Q ss_pred             ccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhh
Q 017457           83 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC  162 (371)
Q Consensus        83 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa  162 (371)
                      .+.+.|+.|.+|..+.+++|...+.   .+...+                   |+|++|+.++.+.++++|+++++.+++
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~v~~~~~~~iP~~l~~~~~~  145 (341)
T PRK05396         88 EGHIVCGHCRNCRAGRRHLCRNTKG---VGVNRP-------------------GAFAEYLVIPAFNVWKIPDDIPDDLAA  145 (341)
T ss_pred             CCCCCCCCChhhhCcChhhCCCcce---eeecCC-------------------CcceeeEEechHHeEECcCCCCHHHhH
Confidence            9999999999999999999976432   333333                   499999999999999999999998887


Q ss_pred             ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457          163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT  242 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~  242 (371)
                      .+ ..+.++++++..  ...+|++|+|.|+|++|++++|+|+++|+++|+++++++++.+.++++|+++++++++   .+
T Consensus       146 ~~-~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~---~~  219 (341)
T PRK05396        146 IF-DPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAK---ED  219 (341)
T ss_pred             hh-hHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc---cc
Confidence            55 466666665432  3468999999888999999999999999966888888999999999999999998877   67


Q ss_pred             HHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhh
Q 017457          243 VSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSD  320 (371)
Q Consensus       243 ~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~  320 (371)
                      +.+.+.+++.+ ++|++|||.|+...+..++++++++ |+++.+|.....  ..++...+.. ++++.++.....  .+.
T Consensus       220 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~l~~~~~~~~--~~~  294 (341)
T PRK05396        220 LRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPPGD--MAIDWNKVIFKGLTIKGIYGREM--FET  294 (341)
T ss_pred             HHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCC--CcccHHHHhhcceEEEEEEccCc--cch
Confidence            88888888876 9999999999877789999999998 999999864322  2233333333 677777642211  234


Q ss_pred             HHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEEeC
Q 017457          321 IATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWMD  368 (371)
Q Consensus       321 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~~~  368 (371)
                      +..+++++.++ +.+.+++.+.++++++++|++.+.++..+|++++++
T Consensus       295 ~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~a~~~~~~~~~gk~vv~~~  341 (341)
T PRK05396        295 WYKMSALLQSG-LDLSPIITHRFPIDDFQKGFEAMRSGQSGKVILDWD  341 (341)
T ss_pred             HHHHHHHHHcC-CChhHheEEEEeHHHHHHHHHHHhcCCCceEEEecC
Confidence            66788888888 444445679999999999999988876459998764

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.2e-39  Score=309.28  Aligned_cols=351  Identities=32%  Similarity=0.526  Sum_probs=281.0

Q ss_pred             CCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCC---cCCCCEEe
Q 017457            5 PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE---VKERDLVL   81 (371)
Q Consensus         5 ~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~---~~~Gd~V~   81 (371)
                      ++.++++++.|.|.+.++||+||+.++++|++|+....+.++.   .+|.++|||++|+|+.+|+++++   |++||+|+
T Consensus         9 ~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~---~~p~~~g~e~~G~v~~vG~~~~~~~~~~~Gd~V~   85 (367)
T cd08263           9 PNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF---PPPFVLGHEISGEVVEVGPNVENPYGLSVGDRVV   85 (367)
T ss_pred             CCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC---CCCcccccccceEEEEeCCCCCCCCcCCCCCEEE
Confidence            3456889999999999999999999999999999988886643   46789999999999999999988   99999999


Q ss_pred             eccCCCCCCCccccCCCCCCCCCCCC-CCCCCCCCCC-CccccccCCceeecccCcccccceeeeecceeEECCCCCCcc
Q 017457           82 PIFHRDCGECRDCKSSKSNTCSKFGR-GYRPNMPRDG-TSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLG  159 (371)
Q Consensus        82 ~~~~~~~~~c~~~~~~~~~~~~~~~~-~~~~g~~~~g-~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~  159 (371)
                      +.+...||.|.+|..+.+++|..... +...|..++| +..++...+.+. . ...|+|++|+.++.+.++++|+++++.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~g~~~~~~~~~~~~~~~~P~~is~~  163 (367)
T cd08263          86 GSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVY-M-YSMGGLAEYAVVPATALAPLPESLDYT  163 (367)
T ss_pred             EcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccc-c-ccCCcceeEEEechhhEEECCCCCCHH
Confidence            98889999999999999999986431 0000001111 000000000000 0 112589999999999999999999999


Q ss_pred             hhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCC
Q 017457          160 IACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG  239 (371)
Q Consensus       160 ~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~  239 (371)
                      +++.++++++|||+++.....+.++++|||+|+|++|++++++|+++|+.+|+++++++++.+.++++|++++++++.  
T Consensus       164 ~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~~~~--  241 (367)
T cd08263         164 ESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVNAAK--  241 (367)
T ss_pred             HHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEecCCc--
Confidence            999999999999998877778899999999988999999999999999944999988999999999999999999877  


Q ss_pred             CccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHH-hcCceEEEeeccCCCc
Q 017457          240 DKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFGGLKP  317 (371)
Q Consensus       240 ~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~  317 (371)
                       .++.+.+.+++++ ++|++||++++......++++++++ |+++.++.........++...+ ..+.++.++..  ...
T Consensus       242 -~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  317 (367)
T cd08263         242 -EDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYG--ARP  317 (367)
T ss_pred             -ccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcC-CEEEEEccCCCCCccccCHHHHhhCCeEEEecCC--CCc
Confidence             6788888888766 8999999999873489999999998 9999998643322344555555 34778777532  222


Q ss_pred             hhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEE
Q 017457          318 RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW  366 (371)
Q Consensus       318 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~  366 (371)
                      .+.+++++++++++.+.+..++++.+++++++++++.+.+++.. |+||+
T Consensus       318 ~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~  367 (367)
T cd08263         318 RQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE  367 (367)
T ss_pred             HHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence            46788999999999887665567899999999999999887754 88763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=100.00  E-value=8.4e-40  Score=307.77  Aligned_cols=333  Identities=26%  Similarity=0.352  Sum_probs=271.6

Q ss_pred             ccCCCCcEEEEEecCCCC-CCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEe
Q 017457            3 RIPGKPLVIEEIEVEPPK-AWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVL   81 (371)
Q Consensus         3 ~~~~~~l~~~~~~~~~~~-~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~   81 (371)
                      +.+...+++++.+.|+|. ++||+||+.++++|+.|+....|.++.   .+|.++|+|++|+|+++|++++.+++||+|+
T Consensus         6 ~~~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~---~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~   82 (344)
T cd08284           6 FKGPGDVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIPS---TPGFVLGHEFVGEVVEVGPEVRTLKVGDRVV   82 (344)
T ss_pred             EecCCCceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCCC---CCCcccccceEEEEEeeCCCccccCCCCEEE
Confidence            344567999999999985 999999999999999999988886652   4577899999999999999999999999999


Q ss_pred             eccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecc--eeEECCCCCCcc
Q 017457           82 PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKITPHIPLG  159 (371)
Q Consensus        82 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~~P~~l~~~  159 (371)
                      +.+...|++|.+|..+.++.|.....   .|...-               ....|+|++|+.++++  .++++|+++++.
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~---------------~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~  144 (344)
T cd08284          83 SPFTIACGECFYCRRGQSGRCAKGGL---FGYAGS---------------PNLDGAQAEYVRVPFADGTLLKLPDGLSDE  144 (344)
T ss_pred             EcccCCCCCChHHhCcCcccCCCCcc---cccccc---------------CCCCCceeEEEEcccccCceEECCCCCCHH
Confidence            99989999999999999999976432   211000               0112589999999965  999999999999


Q ss_pred             hhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCC
Q 017457          160 IACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG  239 (371)
Q Consensus       160 ~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~  239 (371)
                      +++.++++++|||+++. ...++++++|||+|+|++|++++++|+.+|+.+|+++++++++.+.++++|+. .++.+.  
T Consensus       145 ~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~--  220 (344)
T cd08284         145 AALLLGDILPTGYFGAK-RAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINFED--  220 (344)
T ss_pred             HhhhhcCchHHHHhhhH-hcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEecCC--
Confidence            99999999999999874 47889999999998899999999999999975799998888999999999975 456555  


Q ss_pred             CccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHH-hcCceEEEeeccCCCc
Q 017457          240 DKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFGGLKP  317 (371)
Q Consensus       240 ~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~  317 (371)
                       .++...+.+++++ ++|++||++++.......+++++++ |+++.+|.... .......... ..++++.+..   ...
T Consensus       221 -~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~  294 (344)
T cd08284         221 -AEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPG-GVISSVGVHTA-EEFPFPGLDAYNKNLTLRFGR---CPV  294 (344)
T ss_pred             -cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEECcCCC-CCccccHHHHhhcCcEEEEec---CCc
Confidence             5788888888876 9999999999876689999999998 99999997432 2223333333 3477776542   112


Q ss_pred             hhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEE
Q 017457          318 RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIW  366 (371)
Q Consensus       318 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~  366 (371)
                      .+.+++++++++++++.+..++++.+++++++++++.+.+++..|+++.
T Consensus       295 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~Vi~  343 (344)
T cd08284         295 RSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKVLKVVLD  343 (344)
T ss_pred             chhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCceEEEec
Confidence            4678999999999988765556789999999999998887655787764

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=5.9e-40  Score=307.96  Aligned_cols=330  Identities=24%  Similarity=0.378  Sum_probs=270.8

Q ss_pred             CccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEe
Q 017457            2 QRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVL   81 (371)
Q Consensus         2 ~~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~   81 (371)
                      .+.++..+++++.+.|+|.++||+||+.++++|++|++...|.+...  .+|.++|||++|+|+++|+.+++|++||+|+
T Consensus         5 ~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~--~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~   82 (337)
T cd05283           5 ARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPT--KYPLVPGHEIVGIVVAVGSKVTKFKVGDRVG   82 (337)
T ss_pred             EecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCC--CCCcccCcceeeEEEEECCCCcccCCCCEEE
Confidence            34566789999999999999999999999999999999998876444  6788999999999999999999999999997


Q ss_pred             -eccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcch
Q 017457           82 -PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI  160 (371)
Q Consensus        82 -~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~  160 (371)
                       ......|++|.+|..+.+++|......+ .|+...+              ....|+|++|+.++.+.++++|+++++++
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--------------~~~~g~~~~~~~v~~~~~~~lp~~~~~~~  147 (337)
T cd05283          83 VGCQVDSCGTCEQCKSGEEQYCPKGVVTY-NGKYPDG--------------TITQGGYADHIVVDERFVFKIPEGLDSAA  147 (337)
T ss_pred             EecCCCCCCCCccccCCchhcCcchhhcc-cccccCC--------------CcCCCcceeEEEechhheEECCCCCCHHH
Confidence             4445679999999999999998765311 1111101              11125899999999999999999999999


Q ss_pred             hhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCC
Q 017457          161 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD  240 (371)
Q Consensus       161 aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~  240 (371)
                      ++.+.+.+.+||+++ ...++++|++++|.|+|++|++++++|+.+|+ +|+++++++++.+.++++|++++++.+.   
T Consensus       148 aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~---  222 (337)
T cd05283         148 AAPLLCAGITVYSPL-KRNGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKD---  222 (337)
T ss_pred             hhhhhhHHHHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcc---
Confidence            999999999999976 44568999999998889999999999999999 8999999999999999999999987665   


Q ss_pred             ccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHh-cCceEEEeeccCCCchh
Q 017457          241 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGGLKPRS  319 (371)
Q Consensus       241 ~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~  319 (371)
                      .++..   . ..+++|++|||++.......++++++++ |+++.+|.....  ..++...++ ++.++.++....   .+
T Consensus       223 ~~~~~---~-~~~~~d~v~~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~~---~~  292 (337)
T cd05283         223 PEAMK---K-AAGSLDLIIDTVSASHDLDPYLSLLKPG-GTLVLVGAPEEP--LPVPPFPLIFGRKSVAGSLIGG---RK  292 (337)
T ss_pred             hhhhh---h-ccCCceEEEECCCCcchHHHHHHHhcCC-CEEEEEeccCCC--CccCHHHHhcCceEEEEecccC---HH
Confidence            33322   1 2348999999999875588999999998 999999874322  245555544 488999876543   46


Q ss_pred             hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEE
Q 017457          320 DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW  366 (371)
Q Consensus       320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~  366 (371)
                      ++++++++++++++++  .+ +.|+++++++||+.+.+++.. |+|++
T Consensus       293 ~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~  337 (337)
T cd05283         293 ETQEMLDFAAEHGIKP--WV-EVIPMDGINEALERLEKGDVRYRFVLD  337 (337)
T ss_pred             HHHHHHHHHHhCCCcc--ce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence            8899999999997754  34 789999999999999988765 88763

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=1.4e-39  Score=306.50  Aligned_cols=329  Identities=26%  Similarity=0.400  Sum_probs=271.6

Q ss_pred             ccCCCCcEEEEEecCCC-CCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEe
Q 017457            3 RIPGKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVL   81 (371)
Q Consensus         3 ~~~~~~l~~~~~~~~~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~   81 (371)
                      +.+.+++++++.|.|+| +++||+||+.++++|++|++...|.++.   ..|.++|||++|+|+++|++++.+++||+|+
T Consensus         6 ~~~~~~~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~---~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~   82 (345)
T cd08287           6 IHGPGDIRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT---RAPAPIGHEFVGVVEEVGSEVTSVKPGDFVI   82 (345)
T ss_pred             EecCCceeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC---CCCcccccceEEEEEEeCCCCCccCCCCEEE
Confidence            44555799999999986 8999999999999999999988887542   4578999999999999999999999999998


Q ss_pred             eccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecc--eeEECCCCCCcc
Q 017457           82 PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKITPHIPLG  159 (371)
Q Consensus        82 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~~P~~l~~~  159 (371)
                      +.....|+.|.+|..+..+.|.....   .+...+|                   +|++|+.++.+  .++++|+++++.
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~~lP~~l~~~  140 (345)
T cd08287          83 APFAISDGTCPFCRAGFTTSCVHGGF---WGAFVDG-------------------GQGEYVRVPLADGTLVKVPGSPSDD  140 (345)
T ss_pred             eccccCCCCChhhhCcCcccCCCCCc---ccCCCCC-------------------ceEEEEEcchhhCceEECCCCCChh
Confidence            86677899999999999999875432   3333333                   99999999975  999999999882


Q ss_pred             hhh-----ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEc
Q 017457          160 IAC-----LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN  234 (371)
Q Consensus       160 ~aa-----~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~  234 (371)
                      .+.     ++...+.+|++++ ....+++|++|+|.|+|++|++++|+|+++|+++++++++++++.+.++++|++++++
T Consensus       141 ~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~  219 (345)
T cd08287         141 EDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVA  219 (345)
T ss_pred             hhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEec
Confidence            221     2235788899876 4678999999999888999999999999999966899998888999999999999999


Q ss_pred             CCCCCCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCH-HHHhcCceEEEeec
Q 017457          235 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNS-IEILKGRSVCGTYF  312 (371)
Q Consensus       235 ~~~~~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~~~g~~~  312 (371)
                      +..   .++.+.+.+++++ ++|+++|++|+...+..++++++++ |+++.+|....  ...++. ..+.++.++.+...
T Consensus       220 ~~~---~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~  293 (345)
T cd08287         220 ERG---EEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPHG--GVELDVRELFFRNVGLAGGPA  293 (345)
T ss_pred             CCc---ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccC-CEEEEecccCC--CCccCHHHHHhcceEEEEecC
Confidence            877   6788888888877 8999999999877789999999998 99999986432  234444 33455888887532


Q ss_pred             cCCCchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEE
Q 017457          313 GGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIW  366 (371)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~  366 (371)
                      .   ..+.+++++++++++.+.+...+++.++++++++|++.+.+.+..|++++
T Consensus       294 ~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~~~~  344 (345)
T cd08287         294 P---VRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAIKVLLR  344 (345)
T ss_pred             C---cHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCceEEEeC
Confidence            2   13578899999999988765556799999999999999888776799885

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=100.00  E-value=1.3e-40  Score=304.15  Aligned_cols=269  Identities=20%  Similarity=0.374  Sum_probs=222.4

Q ss_pred             cccccccEEEEEeCCCCC------CcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCce
Q 017457           55 IFGHEAVGVVESVGEYVE------EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDV  128 (371)
Q Consensus        55 ~~G~e~~G~Vv~vG~~v~------~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~  128 (371)
                      ++|||++|+|+++|++|+      ++++||||++.+...|+.|++|+.++++.|.....   .|+...+           
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~~-----------   66 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRK---YGHEALD-----------   66 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhh---cCccccc-----------
Confidence            589999999999999999      89999999999999999999999999999987543   3322110           


Q ss_pred             eecccCcccccceeeeecc-eeEECCCCCCcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcC
Q 017457          129 IHHFLNISSFTEYSVVDIT-HVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR  207 (371)
Q Consensus       129 ~~~~~~~g~~a~~~~v~~~-~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g  207 (371)
                       ......|+|+||+.++++ .++++|+++++++++.+++.+.|||+++ +.....+|++|||+|+|++|++++|+||++|
T Consensus        67 -~~~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G  144 (280)
T TIGR03366        67 -SGWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAAL-EAAGDLKGRRVLVVGAGMLGLTAAAAAAAAG  144 (280)
T ss_pred             -CCccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHH-HhccCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence             000012599999999997 7999999999999999999999999975 4456679999999999999999999999999


Q ss_pred             CCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEEC
Q 017457          208 ASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       208 ~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      +++|++++++++|++.++++|++++++.++     ..+.+.+++.+ ++|++||++|.+..++.++++++++ |+++.+|
T Consensus       145 ~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~-----~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G  218 (280)
T TIGR03366       145 AARVVAADPSPDRRELALSFGATALAEPEV-----LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAG  218 (280)
T ss_pred             CCEEEEECCCHHHHHHHHHcCCcEecCchh-----hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEec
Confidence            955999999999999999999999887644     24566677776 8999999999887789999999998 9999999


Q ss_pred             ccCCCCceecCHHHHhc-CceEEEeeccCCCchhhHHHHHHHHHcC--CCCCCCceeEEEecccH
Q 017457          287 VEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDK--ELNLGEFITHEVSFHDI  348 (371)
Q Consensus       287 ~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~  348 (371)
                      ........+++...++. ++++.|+....   .++++++++++.++  ++++.++++++||++++
T Consensus       219 ~~~~~~~~~i~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~  280 (280)
T TIGR03366       219 SVFPGGPVALDPEQVVRRWLTIRGVHNYE---PRHLDQAVRFLAANGQRFPFEELVGKPFPLADV  280 (280)
T ss_pred             cCCCCCceeeCHHHHHhCCcEEEecCCCC---HHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence            74333345666666655 89999975332   46799999999984  66777889999999874

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=100.00  E-value=2.5e-39  Score=304.48  Aligned_cols=329  Identities=27%  Similarity=0.448  Sum_probs=267.7

Q ss_pred             cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccC-CCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEee
Q 017457            4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSS-TDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP   82 (371)
Q Consensus         4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~-~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~   82 (371)
                      .....+++++.|.|.|.++||+|||.++++|+.|++.+.+. .......+|.++|+|++|+|+++|+++++|++||+|++
T Consensus         5 ~~~~~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~   84 (343)
T cd05285           5 HGPGDLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVGDRVAI   84 (343)
T ss_pred             ecCCceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCCCEEEE
Confidence            34456899999999999999999999999999998876432 11111135678999999999999999999999999999


Q ss_pred             ccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhh
Q 017457           83 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC  162 (371)
Q Consensus        83 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa  162 (371)
                      .+...|++|++|..+.+++|.+....  ......                   |+|++|++++++.++++|+++++.+++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-------------------g~~~~~~~v~~~~~~~lP~~~~~~~aa  143 (343)
T cd05285          85 EPGVPCRTCEFCKSGRYNLCPDMRFA--ATPPVD-------------------GTLCRYVNHPADFCHKLPDNVSLEEGA  143 (343)
T ss_pred             ccccCCCCChhHhCcCcccCcCcccc--ccccCC-------------------CceeeeEEecHHHcEECcCCCCHHHhh
Confidence            99999999999999999999865420  000112                   489999999999999999999999998


Q ss_pred             ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457          163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT  242 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~  242 (371)
                      .+ .++.+|++++ ....+++|++|||.|+|++|++++|+|+++|+++|+++.+++++.+.++++|+++++++++   .+
T Consensus       144 ~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~---~~  218 (343)
T cd05285         144 LV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT---ED  218 (343)
T ss_pred             hh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEecccc---cc
Confidence            77 4788999875 7889999999999988999999999999999944999998999999999999999998776   45


Q ss_pred             H---HHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHh-cCceEEEeeccCCCc
Q 017457          243 V---SQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGGLKP  317 (371)
Q Consensus       243 ~---~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~  317 (371)
                      +   .+.+.+++++ ++|++|||+|+...++..+++++++ |+++.+|.....  ..++...+. .++++.+....    
T Consensus       219 ~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~----  291 (343)
T cd05285         219 TPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVGMGKPE--VTLPLSAASLREIDIRGVFRY----  291 (343)
T ss_pred             chhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCC--CccCHHHHhhCCcEEEEeccC----
Confidence            3   7778888877 8999999999875589999999998 999999864322  233333333 36777765322    


Q ss_pred             hhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCc--eeeEEE
Q 017457          318 RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGK--SLRCII  365 (371)
Q Consensus       318 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~--~~kvvv  365 (371)
                      .+.+++++++++++.+.+.+++.+.|+++++++|++.+.+++  .+|+++
T Consensus       292 ~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~  341 (343)
T cd05285         292 ANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI  341 (343)
T ss_pred             hHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence            256888999999998765555678999999999999998875  369887

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=4.4e-40  Score=307.16  Aligned_cols=298  Identities=18%  Similarity=0.221  Sum_probs=246.0

Q ss_pred             CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCC-cCCCCEEeeccCC
Q 017457            8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE-VKERDLVLPIFHR   86 (371)
Q Consensus         8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~-~~~Gd~V~~~~~~   86 (371)
                      .+++.+.|.|+|+++||+||+.++++|++|++...|.++... .+|.++|||++|+|+++|+++++ |++||+|++... 
T Consensus        17 ~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~-~~p~v~G~e~~G~V~~vG~~v~~~~~vGd~V~~~~~-   94 (324)
T cd08291          17 ELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTK-ALPVPPGFEGSGTVVAAGGGPLAQSLIGKRVAFLAG-   94 (324)
T ss_pred             EEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCC-CCCcCCCcceEEEEEEECCCccccCCCCCEEEecCC-
Confidence            478888999999999999999999999999999988765322 57889999999999999999996 999999965321 


Q ss_pred             CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcccc
Q 017457           87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC  166 (371)
Q Consensus        87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~  166 (371)
                                                  .+                   |+|++|+.++++.++++|+++++++++.+++
T Consensus        95 ----------------------------~~-------------------g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~  127 (324)
T cd08291          95 ----------------------------SY-------------------GTYAEYAVADAQQCLPLPDGVSFEQGASSFV  127 (324)
T ss_pred             ----------------------------CC-------------------CcchheeeecHHHeEECCCCCCHHHHhhhcc
Confidence                                        01                   3899999999999999999999999998888


Q ss_pred             chhhhHHHHHHHcCCCCCCeEEEE-cC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHH
Q 017457          167 GVSTGVGAAWKVAGVEVGSTVAIF-GL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVS  244 (371)
Q Consensus       167 ~~~ta~~~l~~~~~~~~g~~VLI~-G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~  244 (371)
                      .++|||. +...... ++++++|+ |+ |++|++++|+|+++|+ +|+++++++++++.++++|+++++++++   .++.
T Consensus       128 ~~~ta~~-~~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~---~~~~  201 (324)
T cd08291         128 NPLTALG-MLETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGAEYVLNSSD---PDFL  201 (324)
T ss_pred             cHHHHHH-HHHhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEECCC---ccHH
Confidence            9999975 4455555 56667665 54 9999999999999999 8999999999999999999999999877   7888


Q ss_pred             HHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHh-cCceEEEeeccCCC---chh
Q 017457          245 QVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGGLK---PRS  319 (371)
Q Consensus       245 ~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~---~~~  319 (371)
                      +.+++++++ ++|++||++|+.. ....+++++++ |+++.+|.........++...++ ++.++.++....+.   ..+
T Consensus       202 ~~v~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (324)
T cd08291         202 EDLKELIAKLNATIFFDAVGGGL-TGQILLAMPYG-STLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPE  279 (324)
T ss_pred             HHHHHHhCCCCCcEEEECCCcHH-HHHHHHhhCCC-CEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHH
Confidence            899998887 9999999999877 77889999998 99999986432222124344444 48899988765542   235


Q ss_pred             hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEE
Q 017457          320 DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII  365 (371)
Q Consensus       320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv  365 (371)
                      ++++++++++ ++  +.+.++++|+|+++++|++.+.+++.. |+++
T Consensus       280 ~~~~~~~~~~-~~--~~~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~  323 (324)
T cd08291         280 VVKKLKKLVK-TE--LKTTFASRYPLALTLEAIAFYSKNMSTGKKLL  323 (324)
T ss_pred             HHHHHHHHHh-Cc--cccceeeEEcHHHHHHHHHHHHhCCCCCeEEe
Confidence            6788888887 64  445688999999999999999886654 8886

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=100.00  E-value=2.9e-39  Score=303.58  Aligned_cols=332  Identities=23%  Similarity=0.375  Sum_probs=264.9

Q ss_pred             CccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccc-cCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEE
Q 017457            2 QRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWK-SSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLV   80 (371)
Q Consensus         2 ~~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~-g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V   80 (371)
                      ++++..++++++.+.|+++++||+||+.++++|++|..... +........+|.++|+|++|+|+++|+++++|++||+|
T Consensus         2 ~~~~~~~~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V   81 (339)
T cd08232           2 VIHAAGDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRV   81 (339)
T ss_pred             eeccCCceEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEE
Confidence            45667789999999999999999999999999999987763 33221111457789999999999999999999999999


Q ss_pred             eeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCC-CCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcc
Q 017457           81 LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR-DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLG  159 (371)
Q Consensus        81 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~-~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~  159 (371)
                      ++.+...|++|.+|..+..+.|..+..   .+... +               ....|+|++|+.++++.++++|+++++.
T Consensus        82 ~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~---------------~~~~g~~~~~v~v~~~~~~~iP~~~~~~  143 (339)
T cd08232          82 AVNPSRPCGTCDYCRAGRPNLCLNMRF---LGSAMRF---------------PHVQGGFREYLVVDASQCVPLPDGLSLR  143 (339)
T ss_pred             EEccCCcCCCChHHhCcCcccCccccc---eeecccc---------------CCCCCceeeEEEechHHeEECcCCCCHH
Confidence            999999999999999999999987643   22100 0               0012499999999999999999999999


Q ss_pred             hhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCC
Q 017457          160 IACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG  239 (371)
Q Consensus       160 ~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~  239 (371)
                      +++. ..++++||+++...... ++++|||.|+|.+|++++|+|+++|+++|+++++++++.+.++++|+++++++++  
T Consensus       144 ~aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~--  219 (339)
T cd08232         144 RAAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLAR--  219 (339)
T ss_pred             Hhhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCc--
Confidence            9876 46888999876555555 8999999888999999999999999867999998899989889999999998765  


Q ss_pred             CccHHHHHHHhh-CC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHh-cCceEEEeeccCCC
Q 017457          240 DKTVSQVIKEMT-DG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGGLK  316 (371)
Q Consensus       240 ~~~~~~~i~~~~-~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~  316 (371)
                       .++    .++. .+ ++|+++|+.++...+..++++|+++ |+++.+|...  .....+...++ +++++.+...    
T Consensus       220 -~~~----~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~----  287 (339)
T cd08232         220 -DPL----AAYAADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGMLG--GPVPLPLNALVAKELDLRGSFR----  287 (339)
T ss_pred             -hhh----hhhhccCCCccEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCC--CCccCcHHHHhhcceEEEEEec----
Confidence             332    2222 22 6999999999766589999999998 9999998533  22333333333 3677777642    


Q ss_pred             chhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEe
Q 017457          317 PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM  367 (371)
Q Consensus       317 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~  367 (371)
                      ..+.+++++++++++.+.+..++.+.|+++++++|++.+.+++.. |+++++
T Consensus       288 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  339 (339)
T cd08232         288 FDDEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF  339 (339)
T ss_pred             CHHHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence            135688899999999887666677999999999999999876654 988764

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=4.2e-39  Score=302.21  Aligned_cols=324  Identities=29%  Similarity=0.505  Sum_probs=271.1

Q ss_pred             CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCC
Q 017457            7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHR   86 (371)
Q Consensus         7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~   86 (371)
                      ..+++.+.|.|++.++||+|+|.++++|+.|+....+.++..  .+|.++|+|++|+|+++|++++.|++||+|+..+..
T Consensus        10 ~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~--~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~   87 (337)
T cd08261          10 GRLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFA--SYPRILGHELSGEVVEVGEGVAGLKVGDRVVVDPYI   87 (337)
T ss_pred             CceEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcC--CCCcccccccEEEEEEeCCCCCCCCCCCEEEECCCC
Confidence            358888999999999999999999999999999988876554  567889999999999999999999999999998888


Q ss_pred             CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcccc
Q 017457           87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC  166 (371)
Q Consensus        87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~  166 (371)
                      .|+.|..|+.+.++.|..-..   .++...                   |+|++|+.++++ ++++|+++++++++.+ .
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~  143 (337)
T cd08261          88 SCGECYACRKGRPNCCENLQV---LGVHRD-------------------GGFAEYIVVPAD-ALLVPEGLSLDQAALV-E  143 (337)
T ss_pred             CCCCChhhhCcCcccCCCCCe---eeecCC-------------------CcceeEEEechh-eEECCCCCCHHHhhhh-c
Confidence            999999999999999953221   222222                   489999999999 9999999999999877 4


Q ss_pred             chhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHH
Q 017457          167 GVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV  246 (371)
Q Consensus       167 ~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~  246 (371)
                      .+.++++++ ...++++|++|||+|+|.+|++++|+|+.+|+ +|+++.+++++.+.++++|+++++++++   .++.+.
T Consensus       144 ~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~~---~~~~~~  218 (337)
T cd08261         144 PLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGD---EDVAAR  218 (337)
T ss_pred             hHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCcc---cCHHHH
Confidence            778888865 77889999999999889999999999999999 8999988999999999999999999887   678888


Q ss_pred             HHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhhHHHH
Q 017457          247 IKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATL  324 (371)
Q Consensus       247 i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~  324 (371)
                      +.+++++ ++|++||++++...+..++++++++ |+++.+|...  ....++...+.. ++++.+..   ....+.++++
T Consensus       219 l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~i~~g~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~  292 (337)
T cd08261         219 LRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGLSK--GPVTFPDPEFHKKELTILGSR---NATREDFPDV  292 (337)
T ss_pred             HHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEcCCC--CCCccCHHHHHhCCCEEEEec---cCChhhHHHH
Confidence            8888877 8999999998866689999999998 9999998643  223344444443 67777653   2234578889


Q ss_pred             HHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCc-ee-eEEEEe
Q 017457          325 AQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGK-SL-RCIIWM  367 (371)
Q Consensus       325 ~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~-kvvv~~  367 (371)
                      +++++++.+.+.+.+...+++++++++++.+.+++ .. |+++++
T Consensus       293 ~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~  337 (337)
T cd08261         293 IDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF  337 (337)
T ss_pred             HHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence            99999998876334668999999999999998873 54 888864

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=100.00  E-value=4.2e-39  Score=302.88  Aligned_cols=326  Identities=29%  Similarity=0.470  Sum_probs=271.4

Q ss_pred             CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCC
Q 017457            7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHR   86 (371)
Q Consensus         7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~   86 (371)
                      +.+.+++.+.|++.+++|+||+.++++|+.|+.+..|.+...  ..|.++|+|++|+|+++|++++.+++||+|++.+..
T Consensus        10 ~~~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~--~~~~~~g~~~~G~V~~~G~~v~~~~~Gd~V~~~~~~   87 (343)
T cd08235          10 NDVRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDL--KPPRILGHEIAGEIVEVGDGVTGFKVGDRVFVAPHV   87 (343)
T ss_pred             CceEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccC--CCCcccccceEEEEEeeCCCCCCCCCCCEEEEccCC
Confidence            358888999999999999999999999999999988876422  457789999999999999999999999999999999


Q ss_pred             CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecce-----eEECCCCCCcchh
Q 017457           87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITH-----VVKITPHIPLGIA  161 (371)
Q Consensus        87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~-----~~~~P~~l~~~~a  161 (371)
                      .|++|++|..+++++|.....   .|....                   |+|++|+.+++++     ++++|+++++.++
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~a  145 (343)
T cd08235          88 PCGECHYCLRGNENMCPNYKK---FGNLYD-------------------GGFAEYVRVPAWAVKRGGVLKLPDNVSFEEA  145 (343)
T ss_pred             CCCCChHHHCcCcccCCCcce---eccCCC-------------------CcceeeEEecccccccccEEECCCCCCHHHH
Confidence            999999999999999976543   333333                   4999999999998     9999999999999


Q ss_pred             hccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCc
Q 017457          162 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK  241 (371)
Q Consensus       162 a~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~  241 (371)
                      +.+ +.+.+||+++. ...+++|++|||+|+|.+|++++++|+++|++.|+++.+++++.+.++++|+++++++++   .
T Consensus       146 a~~-~~~~~a~~~l~-~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~---~  220 (343)
T cd08235         146 ALV-EPLACCINAQR-KAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAE---E  220 (343)
T ss_pred             Hhh-hHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCCc---c
Confidence            876 68899999764 458999999999988999999999999999933999999999999998999999998887   7


Q ss_pred             cHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHh-cCceEEEeeccCCCchh
Q 017457          242 TVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGGLKPRS  319 (371)
Q Consensus       242 ~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~  319 (371)
                      ++.+.+.+++++ ++|++||++++...+..++++++++ |+++.++.........++...+. .+.++.++....   .+
T Consensus       221 ~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~  296 (343)
T cd08235         221 DLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFFGGLPKGSTVNIDPNLIHYREITITGSYAAS---PE  296 (343)
T ss_pred             CHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEeccCCCCCcccCHHHHhhCceEEEEEecCC---hh
Confidence            888888888877 8999999999775589999999998 99999986433222334433333 366776654222   35


Q ss_pred             hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEE
Q 017457          320 DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII  365 (371)
Q Consensus       320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv  365 (371)
                      .+++++++++++.+.+..++...|++++++++++.+.+++..|+++
T Consensus       297 ~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi  342 (343)
T cd08235         297 DYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGKSLKIVI  342 (343)
T ss_pred             hHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCCcEEEEe
Confidence            6888999999998765444668999999999999998877338775

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-39  Score=303.30  Aligned_cols=323  Identities=28%  Similarity=0.392  Sum_probs=267.7

Q ss_pred             cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457            4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI   83 (371)
Q Consensus         4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~   83 (371)
                      .++.++++++.|.|++.++||+||+.++++|++|++...|.++..  .+|.++|||++|+|+++|+.++.+++||+|++.
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~   85 (334)
T PRK13771          8 GFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRM--KYPVILGHEVVGTVEEVGENVKGFKPGDRVASL   85 (334)
T ss_pred             CCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCC--CCCeeccccceEEEEEeCCCCccCCCCCEEEEC
Confidence            344459999999999999999999999999999999888876543  567899999999999999999889999999998


Q ss_pred             cCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhc
Q 017457           84 FHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL  163 (371)
Q Consensus        84 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~  163 (371)
                      ....|++|++|..+.++.|.....   .|....|                   +|++|+.++.+.++++|+++++.+++.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~lp~~~~~~~~a~  143 (334)
T PRK13771         86 LYAPDGTCEYCRSGEEAYCKNRLG---YGEELDG-------------------FFAEYAKVKVTSLVKVPPNVSDEGAVI  143 (334)
T ss_pred             CCCCCcCChhhcCCCcccCccccc---cccccCc-------------------eeeeeeecchhceEECCCCCCHHHhhc
Confidence            888999999999999999987543   3433333                   899999999999999999999999999


Q ss_pred             cccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457          164 LSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT  242 (371)
Q Consensus       164 ~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~  242 (371)
                      +++.+.+||+++... .++++++|||+|+ |.+|++++++|+++|+ +|+++++++++++.++++ ++++++.+     +
T Consensus       144 l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~-----~  215 (334)
T PRK13771        144 VPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS-----K  215 (334)
T ss_pred             ccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch-----h
Confidence            999999999987555 8999999999998 9999999999999999 899999999999999888 77776543     3


Q ss_pred             HHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHH-HhcCceEEEeeccCCCchhhH
Q 017457          243 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGTYFGGLKPRSDI  321 (371)
Q Consensus       243 ~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~  321 (371)
                      +.+.++++  +++|+++|++|+.. ...++++++++ |+++.+|.............. +.++.++.+...   ..++++
T Consensus       216 ~~~~v~~~--~~~d~~ld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~  288 (334)
T PRK13771        216 FSEEVKKI--GGADIVIETVGTPT-LEESLRSLNMG-GKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHIS---ATKRDV  288 (334)
T ss_pred             HHHHHHhc--CCCcEEEEcCChHH-HHHHHHHHhcC-CEEEEEeccCCCCCcccCHHHHHhcccEEEEecC---CCHHHH
Confidence            45555554  37999999999876 88999999998 999999974332221233322 334788887632   235679


Q ss_pred             HHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEe
Q 017457          322 ATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM  367 (371)
Q Consensus       322 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~  367 (371)
                      ++++++++++.+.  ..+++.|+++++++|++.+.+++.. |+++..
T Consensus       289 ~~~~~~~~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  333 (334)
T PRK13771        289 EEALKLVAEGKIK--PVIGAEVSLSEIDKALEELKDKSRIGKILVKP  333 (334)
T ss_pred             HHHHHHHHcCCCc--ceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence            9999999999765  3366899999999999999886654 888754

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=100.00  E-value=7e-39  Score=301.08  Aligned_cols=335  Identities=27%  Similarity=0.450  Sum_probs=271.0

Q ss_pred             CccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCC-CCCCCCCCccccccccEEEEEeCCCCCCcCCCCEE
Q 017457            2 QRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSST-DLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLV   80 (371)
Q Consensus         2 ~~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~-~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V   80 (371)
                      ...|+..+++++.|.|+|.++||+||+.++++|+.|..++.+.. ......+|.++|+|++|+|+++|+++++|++||+|
T Consensus         4 ~~~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V   83 (340)
T TIGR00692         4 KTKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYV   83 (340)
T ss_pred             cccCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEE
Confidence            46788889999999999999999999999999999998765532 11111456789999999999999999999999999


Q ss_pred             eeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcch
Q 017457           81 LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI  160 (371)
Q Consensus        81 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~  160 (371)
                      +..+...|+.|..|..+..+.|...+.   .|+...                   |+|++|+.++++.++++|+++++.+
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~~~~~~~~~lp~~~~~~~  141 (340)
T TIGR00692        84 SVETHIVCGKCYACRRGQYHVCQNTKI---FGVDTD-------------------GCFAEYAVVPAQNIWKNPKSIPPEY  141 (340)
T ss_pred             EECCcCCCCCChhhhCcChhhCcCcce---EeecCC-------------------CcceeEEEeehHHcEECcCCCChHh
Confidence            999999999999999999999988653   333333                   3899999999999999999999865


Q ss_pred             hhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCC
Q 017457          161 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD  240 (371)
Q Consensus       161 aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~  240 (371)
                      + +++..+.+|++++  ....++|++|+|.|+|++|++++|+|+++|+++|+++++++++.+.++++|++++++++.   
T Consensus       142 a-~~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~---  215 (340)
T TIGR00692       142 A-TIQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK---  215 (340)
T ss_pred             h-hhcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccc---
Confidence            5 4666888888865  345789999999888999999999999999944888888888999999999998998876   


Q ss_pred             ccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCchh
Q 017457          241 KTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRS  319 (371)
Q Consensus       241 ~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  319 (371)
                      .++.+.+.+++++ ++|++||++++...+...+++++++ |+++.+|.........+....++.+.++.+....  ...+
T Consensus       216 ~~~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  292 (340)
T TIGR00692       216 EDVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITGR--HMFE  292 (340)
T ss_pred             cCHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCC-CEEEEEccCCCCcccchhhhhhhcceEEEEEecC--Cchh
Confidence            6788888888776 8999999988766689999999998 9999998642222222221223336667665411  1234


Q ss_pred             hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEEe
Q 017457          320 DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM  367 (371)
Q Consensus       320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~~  367 (371)
                      .+.+++++++++++.+.+++.+.+++++++++++.+.+++.+|+++.+
T Consensus       293 ~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~gkvvv~~  340 (340)
T TIGR00692       293 TWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQTGKVILSL  340 (340)
T ss_pred             hHHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCCceEEEeC
Confidence            578899999999887555567999999999999998877656888764

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=100.00  E-value=4.8e-39  Score=305.90  Aligned_cols=339  Identities=26%  Similarity=0.358  Sum_probs=268.8

Q ss_pred             cCCCCcEEEEEecCCC-CCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEee
Q 017457            4 IPGKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP   82 (371)
Q Consensus         4 ~~~~~l~~~~~~~~~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~   82 (371)
                      .+..+++++++|+|+| +++||+|||+++++|++|++...|.++ .  .+|.++|||++|+|+++|+.++.+++||+|++
T Consensus         7 ~~~~~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~--~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~   83 (375)
T cd08282           7 GGPGNVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-A--EPGLVLGHEAMGEVEEVGSAVESLKVGDRVVV   83 (375)
T ss_pred             ecCCceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-C--CCCceeccccEEEEEEeCCCCCcCCCCCEEEE
Confidence            3445688999999986 799999999999999999999988765 2  56889999999999999999999999999999


Q ss_pred             ccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecc--eeEECCCCCCcc-
Q 017457           83 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKITPHIPLG-  159 (371)
Q Consensus        83 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~~P~~l~~~-  159 (371)
                      .+...|+.|..|+.+..++|......  .+....|  .++.        ....|+|++|+.++.+  .++++|+++++. 
T Consensus        84 ~~~~~~g~~~~c~~~~~~~~~~~~~~--~~~~~~~--~~~~--------~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~  151 (375)
T cd08282          84 PFNVACGRCRNCKRGLTGVCLTVNPG--RAGGAYG--YVDM--------GPYGGGQAEYLRVPYADFNLLKLPDRDGAKE  151 (375)
T ss_pred             eCCCCCCCCHHHHCcCcccCCCCCcc--ccccccc--cccc--------CCCCCeeeeEEEeecccCcEEECCCCCChhh
Confidence            99999999999999999999753211  0000000  0000        0012589999999976  899999999998 


Q ss_pred             --hhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCC
Q 017457          160 --IACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPAT  237 (371)
Q Consensus       160 --~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~  237 (371)
                        +++.+.+.+.|||+++ ...++++|++|||.|+|++|++++|+|+++|+.+|+++++++++.+.++++|+. .+++++
T Consensus       152 ~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~v~~~~  229 (375)
T cd08282         152 KDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI-PIDFSD  229 (375)
T ss_pred             hhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCe-EeccCc
Confidence              5677888999999987 778899999999988899999999999999986788999999999999999984 566665


Q ss_pred             CCCccHHHHHHHhhCCCcCEEEECCCChH-----------HHHHHHHHhhcCCceEEEECccCCCC-----------cee
Q 017457          238 CGDKTVSQVIKEMTDGGADYCFECIGLTS-----------VMNDAFNSSREGWGKTVILGVEMHGS-----------PIS  295 (371)
Q Consensus       238 ~~~~~~~~~i~~~~~gg~d~vid~~g~~~-----------~~~~~~~~l~~~~G~~v~~g~~~~~~-----------~~~  295 (371)
                         +++.+.+.+++++++|+++||+|+..           .+..++++++++ |+++.+|......           ...
T Consensus       230 ---~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~~~~~~~~~~~~~~~~~  305 (375)
T cd08282         230 ---GDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG-GGIGIVGVYVAEDPGAGDAAAKQGELS  305 (375)
T ss_pred             ---ccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcC-cEEEEEeccCCcccccccccccCcccc
Confidence               67888888877668999999998762           478999999998 9998887632211           123


Q ss_pred             cCHHHHhc-CceEEEeeccCCCchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEE
Q 017457          296 LNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIW  366 (371)
Q Consensus       296 ~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~  366 (371)
                      ++...+.. +.++.+....   ..+.+..++++++++++.+..++++.|+++++++|++.+.+++..|+++.
T Consensus       306 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~kvvv~  374 (375)
T cd08282         306 FDFGLLWAKGLSFGTGQAP---VKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRLETKVVIK  374 (375)
T ss_pred             ccHHHHHhcCcEEEEecCC---chhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCCceEEEeC
Confidence            34444443 5555554321   24567889999999988765557799999999999999988874488875

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>PLN02702 L-idonate 5-dehydrogenase

Probab=100.00  E-value=9.8e-39  Score=302.78  Aligned_cols=330  Identities=23%  Similarity=0.424  Sum_probs=261.5

Q ss_pred             CCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCC-CCCCCCccccccccEEEEEeCCCCCCcCCCCEEeecc
Q 017457            6 GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-PKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIF   84 (371)
Q Consensus         6 ~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~   84 (371)
                      .+.+++++.+.|+|.++||+||+.++++|++|++...+.... ....+|.++|||++|+|+++|+++++|++||+|++.+
T Consensus        26 ~~~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~  105 (364)
T PLN02702         26 VNTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLVVGDRVALEP  105 (364)
T ss_pred             CCceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEcC
Confidence            345888888888899999999999999999999988763211 1113577899999999999999999999999999999


Q ss_pred             CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcc
Q 017457           85 HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLL  164 (371)
Q Consensus        85 ~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~  164 (371)
                      ...|++|..|..+..+.|.....   ++...                  ..|+|++|+.++.+.++++|+++++.+++..
T Consensus       106 ~~~~~~c~~c~~g~~~~c~~~~~---~~~~~------------------~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~  164 (364)
T PLN02702        106 GISCWRCNLCKEGRYNLCPEMKF---FATPP------------------VHGSLANQVVHPADLCFKLPENVSLEEGAMC  164 (364)
T ss_pred             CCCCCCCcchhCcCcccCCCccc---cCCCC------------------CCCcccceEEcchHHeEECCCCCCHHHHhhh
Confidence            99999999999999999975331   11110                  1249999999999999999999999988753


Q ss_pred             ccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHH
Q 017457          165 SCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVS  244 (371)
Q Consensus       165 ~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~  244 (371)
                      . .+.++++++ ...++.++++|||+|+|++|++++++|+++|+..|+++++++++.+.++++|++.++++.. ...++.
T Consensus       165 ~-~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~  241 (364)
T PLN02702        165 E-PLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVST-NIEDVE  241 (364)
T ss_pred             h-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCc-ccccHH
Confidence            2 445577765 6788999999999988999999999999999966888888999999999999988776432 014566


Q ss_pred             HHHHHh---hCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHh-cCceEEEeeccCCCchhh
Q 017457          245 QVIKEM---TDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGGLKPRSD  320 (371)
Q Consensus       245 ~~i~~~---~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~  320 (371)
                      +.+.++   +++++|++||++|+...+..++++++++ |+++.+|....  ...+....+. .++++.++...    ...
T Consensus       242 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~----~~~  314 (364)
T PLN02702        242 SEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGMGHN--EMTVPLTPAAAREVDVVGVFRY----RNT  314 (364)
T ss_pred             HHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCC--CCcccHHHHHhCccEEEEeccC----hHH
Confidence            666554   2348999999999766689999999998 99999986422  2233333333 37888886432    246


Q ss_pred             HHHHHHHHHcCCCCCCCceeEEEec--ccHHHHHHHHhcCcee-eEEEE
Q 017457          321 IATLAQKYLDKELNLGEFITHEVSF--HDINKAFDLLLEGKSL-RCIIW  366 (371)
Q Consensus       321 ~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~a~~~~~~~~~~-kvvv~  366 (371)
                      ++.++++++++++.+.+++++.|++  +++++|++.+.+++.. |+++.
T Consensus       315 ~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~  363 (364)
T PLN02702        315 WPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN  363 (364)
T ss_pred             HHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence            7889999999988765566788666  7999999998887655 88874

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=6.6e-39  Score=307.29  Aligned_cols=332  Identities=20%  Similarity=0.208  Sum_probs=268.4

Q ss_pred             CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCC--------CCCCCC-ccccccccEEEEEeCCCCCCcCCC
Q 017457            7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL--------PKLPLP-VIFGHEAVGVVESVGEYVEEVKER   77 (371)
Q Consensus         7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~--------~~~~~p-~~~G~e~~G~Vv~vG~~v~~~~~G   77 (371)
                      ..+++.+.|.|+|+++||+||+.++++|++|.+...+....        .....| .++|||++|+|+++|+.++.+++|
T Consensus        23 ~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~e~~G~V~~vG~~v~~~~~G  102 (398)
T TIGR01751        23 QAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGSDASGVVWRVGPGVTRWKVG  102 (398)
T ss_pred             cceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecccceEEEEEEeCCCCCCCCCC
Confidence            45899999999999999999999999999998776554210        000123 379999999999999999999999


Q ss_pred             CEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCC
Q 017457           78 DLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIP  157 (371)
Q Consensus        78 d~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~  157 (371)
                      |+|++.+...|++|++|..+.+++|.....   .|+..                  ..|+|++|+.+++++++++|++++
T Consensus       103 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~------------------~~g~~ae~~~v~~~~~~~vP~~l~  161 (398)
T TIGR01751       103 DEVVASCLQVDLTAPDGRVGDPMLSSEQRI---WGYET------------------NFGSFAEFALVKDYQLMPKPKHLT  161 (398)
T ss_pred             CEEEEccccccCCchhhccCcccccccccc---ccccC------------------CCccceEEEEechHHeEECCCCCC
Confidence            999999999999999999999999965431   22211                  124999999999999999999999


Q ss_pred             cchhhccccchhhhHHHHHH--HcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEc
Q 017457          158 LGIACLLSCGVSTGVGAAWK--VAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN  234 (371)
Q Consensus       158 ~~~aa~~~~~~~ta~~~l~~--~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~  234 (371)
                      +++++.+.+++.|||+++..  ..++.+|++|||+|+ |++|++++++|+++|+ +++++++++++.+.++++|++.++|
T Consensus       162 ~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~~~~~~~~~~~~~~~g~~~~v~  240 (398)
T TIGR01751       162 WEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVAVVSSPEKAEYCRELGAEAVID  240 (398)
T ss_pred             HHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCCEEec
Confidence            99999999999999998654  467899999999998 9999999999999999 7888888999999999999999998


Q ss_pred             CCCCC-------------------CccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCce
Q 017457          235 PATCG-------------------DKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPI  294 (371)
Q Consensus       235 ~~~~~-------------------~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~  294 (371)
                      +++.+                   ...+.+.+.+++++ ++|++|||+|... +..++++++++ |+++.+|.... ...
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~-~~~  317 (398)
T TIGR01751       241 RNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRAT-FPTSVFVCRRG-GMVVICGGTTG-YNH  317 (398)
T ss_pred             CCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHH-HHHHHHhhccC-CEEEEEccccC-CCC
Confidence            75421                   01355667778876 8999999999755 88999999998 99999987432 223


Q ss_pred             ecCHHHHhc-CceEEEeeccCCCchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEeC
Q 017457          295 SLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMD  368 (371)
Q Consensus       295 ~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~~  368 (371)
                      .++...+.. +.++.++.+..   ..++++++++++++++..  .+++++++++++++++.+.+++.. |+++.+.
T Consensus       318 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~  388 (398)
T TIGR01751       318 DYDNRYLWMRQKRIQGSHFAN---LREAWEANRLVAKGRIDP--TLSKVYPLEEIGQAHQDVHRNHHQGNVAVLVL  388 (398)
T ss_pred             CcCHHHHhhcccEEEccccCc---HHHHHHHHHHHHCCCccc--ceeeEEcHHHHHHHHHHHHcCCCCceEEEEeC
Confidence            344444433 66777765433   345788999999997763  367999999999999999887765 8888764

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-39  Score=302.58  Aligned_cols=301  Identities=20%  Similarity=0.239  Sum_probs=241.2

Q ss_pred             CcEEEEE---ecC-CCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccc--cccEEEEEeCCCCCCcCCCCEEe
Q 017457            8 PLVIEEI---EVE-PPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGH--EAVGVVESVGEYVEEVKERDLVL   81 (371)
Q Consensus         8 ~l~~~~~---~~~-~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~--e~~G~Vv~vG~~v~~~~~Gd~V~   81 (371)
                      .|++++.   +.| ++++||||||+.|+++|+.|...+.+.....  ..|.++|+  |++|+|..+|+++++|++||+|.
T Consensus        26 ~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~--~~p~~~G~~~~~~G~v~~vg~~v~~~~~Gd~V~  103 (348)
T PLN03154         26 DMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSY--LPPFVPGQRIEGFGVSKVVDSDDPNFKPGDLIS  103 (348)
T ss_pred             cEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCC--CCCcCCCCeeEeeEEEEEEecCCCCCCCCCEEE
Confidence            3777774   555 4589999999999999998875443322222  35788998  88999999999999999999994


Q ss_pred             eccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecce--eEE--CCCCCC
Q 017457           82 PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITH--VVK--ITPHIP  157 (371)
Q Consensus        82 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~--~~~--~P~~l~  157 (371)
                      ..                                                    |+|+||+.++.+.  +++  +|++++
T Consensus       104 ~~----------------------------------------------------~~~aey~~v~~~~~~~~~~~~P~~~~  131 (348)
T PLN03154        104 GI----------------------------------------------------TGWEEYSLIRSSDNQLRKIQLQDDIP  131 (348)
T ss_pred             ec----------------------------------------------------CCcEEEEEEeccccceEEccCcCCCC
Confidence            31                                                    3799999998753  544  589999


Q ss_pred             cc-hhhccccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhCcceEEc
Q 017457          158 LG-IACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFIN  234 (371)
Q Consensus       158 ~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga~~v~~  234 (371)
                      +. +++.++++++|||+++....++++|++|||+|+ |++|++++|+||++|+ +|+++++++++.+.++ ++|++++++
T Consensus       132 ~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~~~~~k~~~~~~~lGa~~vi~  210 (348)
T PLN03154        132 LSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFN  210 (348)
T ss_pred             HHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhcCCCEEEE
Confidence            86 688899999999998877888999999999998 9999999999999999 8999999999999987 799999999


Q ss_pred             CCCCCCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCc----eecCHHHHhc-CceEEE
Q 017457          235 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP----ISLNSIEILK-GRSVCG  309 (371)
Q Consensus       235 ~~~~~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~----~~~~~~~~~~-~~~~~g  309 (371)
                      +++  ..++.+.+++++++++|++||++|+.. +..++++++++ |+++.+|.......    ..++...++. ++++.|
T Consensus       211 ~~~--~~~~~~~i~~~~~~gvD~v~d~vG~~~-~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g  286 (348)
T PLN03154        211 YKE--EPDLDAALKRYFPEGIDIYFDNVGGDM-LDAALLNMKIH-GRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQG  286 (348)
T ss_pred             CCC--cccHHHHHHHHCCCCcEEEEECCCHHH-HHHHHHHhccC-CEEEEECccccCCCCCCCCcccHHHHhhccceEEE
Confidence            864  136777788877668999999999865 89999999998 99999996432210    0123334443 788998


Q ss_pred             eeccCCC--chhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEeCc
Q 017457          310 TYFGGLK--PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDK  369 (371)
Q Consensus       310 ~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~~~  369 (371)
                      +....+.  ..+.++++++++++|++.+  .++.+|+|+++++|++.+.+++.. |+++.+.+
T Consensus       287 ~~~~~~~~~~~~~~~~~~~l~~~G~l~~--~~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~~  347 (348)
T PLN03154        287 FLQSDYLHLFPQFLENVSRYYKQGKIVY--IEDMSEGLESAPAALVGLFSGKNVGKQVIRVAK  347 (348)
T ss_pred             EEHHHHHHHHHHHHHHHHHHHHCCCccC--ceecccCHHHHHHHHHHHHcCCCCceEEEEecC
Confidence            8654332  1345788999999998764  366789999999999999998765 99998754

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=2.7e-38  Score=297.14  Aligned_cols=325  Identities=27%  Similarity=0.454  Sum_probs=275.0

Q ss_pred             CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeecc-C
Q 017457            7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIF-H   85 (371)
Q Consensus         7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~-~   85 (371)
                      ..+++++.+.|.|.++||+||+.++++|++|..+..|.++... ..|.++|+|++|+|+++|++++.+++||+|+..+ .
T Consensus        12 ~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~-~~~~~~g~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~   90 (341)
T cd08297          12 KPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKP-KLPLIGGHEGAGVVVAVGPGVSGLKVGDRVGVKWLY   90 (341)
T ss_pred             CCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCC-CCCccCCcccceEEEEeCCCCCCCCCCCEEEEecCC
Confidence            3689999999999999999999999999999998888764321 4566899999999999999999999999999876 4


Q ss_pred             CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccc
Q 017457           86 RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLS  165 (371)
Q Consensus        86 ~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~  165 (371)
                      ..|+.|.+|..++.++|.....   .|+...|                   +|++|+.++++.++++|+++++.+++.++
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~s~~~~~~~~~~~lp~~~~~~~~a~l~  148 (341)
T cd08297          91 DACGKCEYCRTGDETLCPNQKN---SGYTVDG-------------------TFAEYAIADARYVTPIPDGLSFEQAAPLL  148 (341)
T ss_pred             CCCCCCccccCCCcccCCCccc---cccccCC-------------------cceeEEEeccccEEECCCCCCHHHHHHHH
Confidence            6799999999999999987654   4554444                   89999999999999999999999999999


Q ss_pred             cchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHH
Q 017457          166 CGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVS  244 (371)
Q Consensus       166 ~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~  244 (371)
                      ..+.|||+++.. .+++++++|||+|+ +.+|++++++|+++|+ +|+++.+++++.+.++++|++++++++.   .++.
T Consensus       149 ~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~---~~~~  223 (341)
T cd08297         149 CAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVDFKK---SDDV  223 (341)
T ss_pred             cchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEcCCC---ccHH
Confidence            999999997654 58999999999998 7799999999999999 8999999999999999999999998877   6788


Q ss_pred             HHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhhHH
Q 017457          245 QVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIA  322 (371)
Q Consensus       245 ~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~  322 (371)
                      +.+.+++++ ++|+++|+.++......++++++++ |+++.+|... ....+++...+.. +.++.+....   ..++++
T Consensus       224 ~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~  298 (341)
T cd08297         224 EAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLPP-GGFIPLDPFDLVLRGITIVGSLVG---TRQDLQ  298 (341)
T ss_pred             HHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcC-CEEEEecCCC-CCCCCCCHHHHHhcccEEEEeccC---CHHHHH
Confidence            888888876 8999999777666689999999998 9999998643 2233455444434 7788875332   246789


Q ss_pred             HHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEe
Q 017457          323 TLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM  367 (371)
Q Consensus       323 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~  367 (371)
                      +++++++++++.+  .+ ..|++++++++++.+.++... |++++|
T Consensus       299 ~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  341 (341)
T cd08297         299 EALEFAARGKVKP--HI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF  341 (341)
T ss_pred             HHHHHHHcCCCcc--ee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            9999999997754  34 679999999999999887665 888865

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.1e-38  Score=299.73  Aligned_cols=316  Identities=20%  Similarity=0.351  Sum_probs=253.6

Q ss_pred             CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCC---------CCCCCCCccccccccEEEEEeCCCCCC-cCCC
Q 017457            8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTD---------LPKLPLPVIFGHEAVGVVESVGEYVEE-VKER   77 (371)
Q Consensus         8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~---------~~~~~~p~~~G~e~~G~Vv~vG~~v~~-~~~G   77 (371)
                      .+++++.+.|+|.++||+|++.++++|+.|++...|...         .....+|.++|+|++|+|+++|+++++ |++|
T Consensus        10 ~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~~G   89 (341)
T cd08262          10 PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDYGPGTERKLKVG   89 (341)
T ss_pred             ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEeCCCCcCCCCCC
Confidence            688899999999999999999999999999998887321         001145788999999999999999987 9999


Q ss_pred             CEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCC
Q 017457           78 DLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIP  157 (371)
Q Consensus        78 d~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~  157 (371)
                      |+|++.+...|++|..|..+..             -...                   |+|++|+.++.++++++|++++
T Consensus        90 d~V~~~~~~~~~~~~~~~~~~~-------------~~~~-------------------g~~~~~~~v~~~~~~~lP~~~s  137 (341)
T cd08262          90 TRVTSLPLLLCGQGASCGIGLS-------------PEAP-------------------GGYAEYMLLSEALLLRVPDGLS  137 (341)
T ss_pred             CEEEecCCcCCCCChhhhCCCC-------------cCCC-------------------CceeeeEEechHHeEECCCCCC
Confidence            9999999999999999932110             0112                   4899999999999999999999


Q ss_pred             cchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCC
Q 017457          158 LGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPAT  237 (371)
Q Consensus       158 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~  237 (371)
                      +++++ ++.++++||++ ....++++|++|||+|+|++|++++|+|+++|++.++++++++++.+.++++|+++++++++
T Consensus       138 ~~~a~-~~~~~~~a~~~-~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~  215 (341)
T cd08262         138 MEDAA-LTEPLAVGLHA-VRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAA  215 (341)
T ss_pred             HHHhh-hhhhHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCC
Confidence            99887 55688999997 57788999999999988999999999999999966888888899999999999999998765


Q ss_pred             CCCccHHH---HHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHH-HhcCceEEEeec
Q 017457          238 CGDKTVSQ---VIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGTYF  312 (371)
Q Consensus       238 ~~~~~~~~---~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~  312 (371)
                         .+..+   .+.+.+.+ ++|++||++++...+..++++++++ |+++.+|.......  +.... +.++.++.++..
T Consensus       216 ---~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~--~~~~~~~~~~~~~~~~~~  289 (341)
T cd08262         216 ---DSPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGVCMESDN--IEPALAIRKELTLQFSLG  289 (341)
T ss_pred             ---cCHHHHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCCc--cCHHHHhhcceEEEEEec
Confidence               32211   34445555 8999999999854588899999998 99999986432221  22222 334667765432


Q ss_pred             cCCCchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEE
Q 017457          313 GGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW  366 (371)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~  366 (371)
                      .   ..+++.+++++++++.+.+.+++++.+++++++++++.+.+++.. |++++
T Consensus       290 ~---~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~  341 (341)
T cd08262         290 Y---TPEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD  341 (341)
T ss_pred             c---cHHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence            2   235788999999999888666667999999999999999887765 88763

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=100.00  E-value=2.4e-38  Score=296.90  Aligned_cols=322  Identities=27%  Similarity=0.461  Sum_probs=271.4

Q ss_pred             cEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCCC
Q 017457            9 LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDC   88 (371)
Q Consensus         9 l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~   88 (371)
                      +.+.+.|.|.+.+++|+|++.++++|+.|.....|.++... .+|.++|+|++|+|+++|++++++++||+|++.+..+|
T Consensus        14 ~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~-~~~~~~g~~~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~   92 (338)
T cd08254          14 LVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLT-KLPLTLGHEIAGTVVEVGAGVTNFKVGDRVAVPAVIPC   92 (338)
T ss_pred             eEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccC-CCCEeccccccEEEEEECCCCccCCCCCEEEECCCCCC
Confidence            57778888999999999999999999999999888775322 56789999999999999999999999999999999999


Q ss_pred             CCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccch
Q 017457           89 GECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGV  168 (371)
Q Consensus        89 ~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~~  168 (371)
                      +.|++|..+..++|.....   .|....                   |+|++|+.++.+.++++|+++++.+++.++.++
T Consensus        93 ~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~  150 (338)
T cd08254          93 GACALCRRGRGNLCLNQGM---PGLGID-------------------GGFAEYIVVPARALVPVPDGVPFAQAAVATDAV  150 (338)
T ss_pred             CCChhhhCcCcccCCCCCc---cccccC-------------------CcceeeEEechHHeEECCCCCCHHHhhhhcchH
Confidence            9999999999999965442   344333                   389999999999999999999999999999999


Q ss_pred             hhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHH
Q 017457          169 STGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIK  248 (371)
Q Consensus       169 ~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~  248 (371)
                      .|||+++.....++++++|||.|+|.+|++++++|+.+|+ +|+++++++++.+.++++|++++++..+   ..+.+.+ 
T Consensus       151 ~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~~---~~~~~~~-  225 (338)
T cd08254         151 LTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSLD---DSPKDKK-  225 (338)
T ss_pred             HHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCCC---cCHHHHH-
Confidence            9999988777789999999998889999999999999999 8999999999999999999999888766   5566666 


Q ss_pred             HhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhhHHHHHH
Q 017457          249 EMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQ  326 (371)
Q Consensus       249 ~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~  326 (371)
                      +.+.+ ++|+++|+++....+..++++++++ |+++.+|....  ...++...+.. +.++.++...   ..+.+..+++
T Consensus       226 ~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~  299 (338)
T cd08254         226 AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRD--KLTVDLSDLIARELRIIGSFGG---TPEDLPEVLD  299 (338)
T ss_pred             HHhcCCCceEEEECCCCHHHHHHHHHHhhcC-CEEEEECCCCC--CCccCHHHHhhCccEEEEeccC---CHHHHHHHHH
Confidence            55555 8999999998776689999999998 99999986432  23344444444 6777776432   2467888999


Q ss_pred             HHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEe
Q 017457          327 KYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM  367 (371)
Q Consensus       327 ~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~  367 (371)
                      +++++.+.+.   .+.+++++++++++.+.+++.. |+++.+
T Consensus       300 ll~~~~l~~~---~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  338 (338)
T cd08254         300 LIAKGKLDPQ---VETRPLDEIPEVLERLHKGKVKGRVVLVP  338 (338)
T ss_pred             HHHcCCCccc---ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            9999987654   4789999999999999887765 888763

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd05281 TDH Threonine dehydrogenase

Probab=100.00  E-value=1.9e-38  Score=298.28  Aligned_cols=330  Identities=31%  Similarity=0.476  Sum_probs=264.2

Q ss_pred             CCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCC-CCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457            5 PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSST-DLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI   83 (371)
Q Consensus         5 ~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~-~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~   83 (371)
                      ++..+++.+.+.|+|.++||+||+.++++|+.|..++.+.. ......+|.++|+|++|+|+.+|++++.+++||+|+..
T Consensus         9 ~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~   88 (341)
T cd05281           9 AGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVKVGDYVSAE   88 (341)
T ss_pred             CCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCCCCCEEEEC
Confidence            44468999999999999999999999999999988755431 11111456789999999999999999999999999999


Q ss_pred             cCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhc
Q 017457           84 FHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL  163 (371)
Q Consensus        84 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~  163 (371)
                      +.++||+|.+|..+.+++|...+.   .|....                   |+|++|++++.+.++++|++++++.+ +
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~v~v~~~~~~~lP~~~~~~~a-~  145 (341)
T cd05281          89 THIVCGKCYQCRTGNYHVCQNTKI---LGVDTD-------------------GCFAEYVVVPEENLWKNDKDIPPEIA-S  145 (341)
T ss_pred             CccCCCCChHHHCcCcccCcccce---EeccCC-------------------CcceEEEEechHHcEECcCCCCHHHh-h
Confidence            999999999999999999975432   232222                   48999999999999999999998554 5


Q ss_pred             cccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccH
Q 017457          164 LSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTV  243 (371)
Q Consensus       164 ~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~  243 (371)
                      +..++.++++++.  ...++|++|||.|+|.+|++++++|+++|+++|+++++++++.+.++++|++++++.+.   .++
T Consensus       146 ~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~  220 (341)
T cd05281         146 IQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPRE---EDV  220 (341)
T ss_pred             hhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCccc---ccH
Confidence            5557888888654  45678999999888999999999999999866888888889999999999999988766   677


Q ss_pred             HHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCchhhHH
Q 017457          244 SQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIA  322 (371)
Q Consensus       244 ~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  322 (371)
                      . .+.+++++ ++|++||++|+......++++++++ |+++.+|.........+....++.+..+.+.....  ..+.++
T Consensus       221 ~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  296 (341)
T cd05281         221 V-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRK--MFETWY  296 (341)
T ss_pred             H-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCCCcccccchhhhccceEEEEEecCC--cchhHH
Confidence            7 78888876 9999999999877689999999998 99999986432211222222233467777664221  134678


Q ss_pred             HHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEE
Q 017457          323 TLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIW  366 (371)
Q Consensus       323 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~  366 (371)
                      +++++++++.+.+.+++.+.++++++++||+.+.+++.+|++++
T Consensus       297 ~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~gk~vv~  340 (341)
T cd05281         297 QVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGKCGKVVLY  340 (341)
T ss_pred             HHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCCCceEEec
Confidence            89999999988766667788999999999999988773488875

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=100.00  E-value=3.4e-38  Score=296.14  Aligned_cols=324  Identities=27%  Similarity=0.411  Sum_probs=264.5

Q ss_pred             CCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeecc-
Q 017457            6 GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIF-   84 (371)
Q Consensus         6 ~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~-   84 (371)
                      +....+++.|.|+|.++||+|||.++++|++|++...|..+.   ..|.++|||++|+|+++|++++.|++||+|++.+ 
T Consensus        10 ~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~---~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~   86 (338)
T PRK09422         10 HTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD---KTGRILGHEGIGIVKEVGPGVTSLKVGDRVSIAWF   86 (338)
T ss_pred             CCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC---CCCccCCcccceEEEEECCCCccCCCCCEEEEccC
Confidence            333338899999999999999999999999999988886532   2467899999999999999999999999998654 


Q ss_pred             CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcc
Q 017457           85 HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLL  164 (371)
Q Consensus        85 ~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~  164 (371)
                      ...|+.|.+|..+.++.|.....   .|+..+|                   +|++|+.++.++++++|+++++.+++.+
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~p~~~~~~~aa~l  144 (338)
T PRK09422         87 FEGCGHCEYCTTGRETLCRSVKN---AGYTVDG-------------------GMAEQCIVTADYAVKVPEGLDPAQASSI  144 (338)
T ss_pred             CCCCCCChhhcCCCcccCCCccc---cCccccC-------------------cceeEEEEchHHeEeCCCCCCHHHeehh
Confidence            46799999999999999976552   4444444                   9999999999999999999999999999


Q ss_pred             ccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHH-cCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccH
Q 017457          165 SCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARL-NRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTV  243 (371)
Q Consensus       165 ~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~-~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~  243 (371)
                      ++.+.|||+++ ....+++|++|||+|+|++|++++++|+. +|+ +|+++++++++++.++++|++.+++++.  ..++
T Consensus       145 ~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~  220 (338)
T PRK09422        145 TCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSKR--VEDV  220 (338)
T ss_pred             hcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEecccc--cccH
Confidence            99999999976 77889999999999999999999999998 599 8999999999999999999999988743  1356


Q ss_pred             HHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhhHH
Q 017457          244 SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIA  322 (371)
Q Consensus       244 ~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~  322 (371)
                      .+.+++.++ ++|.++.+.++...+..++++++++ |+++.+|....  ...++...+.. +.++.++....   .++++
T Consensus       221 ~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~~  293 (338)
T PRK09422        221 AKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLPPE--SMDLSIPRLVLDGIEVVGSLVGT---RQDLE  293 (338)
T ss_pred             HHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCC-CEEEEEeeCCC--CceecHHHHhhcCcEEEEecCCC---HHHHH
Confidence            677777766 6885554445555599999999998 99999986422  23444444333 67777654322   46788


Q ss_pred             HHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEeC
Q 017457          323 TLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMD  368 (371)
Q Consensus       323 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~~  368 (371)
                      ++++++.++.+..  .+ ..++++++++|++.+.++... |+++.+.
T Consensus       294 ~~~~l~~~g~l~~--~v-~~~~~~~~~~a~~~~~~~~~~gkvvv~~~  337 (338)
T PRK09422        294 EAFQFGAEGKVVP--KV-QLRPLEDINDIFDEMEQGKIQGRMVIDFT  337 (338)
T ss_pred             HHHHHHHhCCCCc--cE-EEEcHHHHHHHHHHHHcCCccceEEEecC
Confidence            9999999997653  35 568999999999999887765 8888653

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=4.5e-39  Score=276.84  Aligned_cols=306  Identities=24%  Similarity=0.314  Sum_probs=249.5

Q ss_pred             cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457            4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI   83 (371)
Q Consensus         4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~   83 (371)
                      +|.+.+++++.++|....++|+||.+|++||++|+-.++|.|+..+ ++|.+-|+|++|+|+.+|++++.|++||+|+..
T Consensus        30 dP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP-~~PAVgGnEGv~eVv~vGs~vkgfk~Gd~VIp~  108 (354)
T KOG0025|consen   30 DPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRP-ELPAVGGNEGVGEVVAVGSNVKGFKPGDWVIPL  108 (354)
T ss_pred             CchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCC-CCCcccCCcceEEEEEecCCcCccCCCCeEeec
Confidence            4667789999999988888899999999999999999999998775 899999999999999999999999999999775


Q ss_pred             cCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhc
Q 017457           84 FHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL  163 (371)
Q Consensus        84 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~  163 (371)
                      ..                                                +.|+|++|.+.+++.++++++.++++.||+
T Consensus       109 ~a------------------------------------------------~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT  140 (354)
T KOG0025|consen  109 SA------------------------------------------------NLGTWRTEAVFSESDLIKVDKDIPLASAAT  140 (354)
T ss_pred             CC------------------------------------------------CCccceeeEeecccceEEcCCcCChhhhhe
Confidence            43                                                236999999999999999999999999999


Q ss_pred             cccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHH----HHHHhCcceEEcCCCC
Q 017457          164 LSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFE----IGKKFGITDFINPATC  238 (371)
Q Consensus       164 ~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~----~~~~lga~~v~~~~~~  238 (371)
                      +.++.+|||++|....++.+|++|+-.|+ +++|++.+|+||++|+ +.|-+.++....+    .++.+||++|+..++.
T Consensus       141 ~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~Gi-ktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel  219 (354)
T KOG0025|consen  141 LSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGI-KTINVVRDRPNIEELKKQLKSLGATEVITEEEL  219 (354)
T ss_pred             eccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCc-ceEEEeecCccHHHHHHHHHHcCCceEecHHHh
Confidence            99999999999999999999999999998 9999999999999999 5666655554444    3566999999965542


Q ss_pred             CCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHh-cCceEEEeeccCCC
Q 017457          239 GDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGGLK  316 (371)
Q Consensus       239 ~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~  316 (371)
                      .+.+...   ..... .+.+.|||+|+.. ...+.+.|.++ |+++.+|.. +.++..++...++ +++.+.|+++..|.
T Consensus       220 ~~~~~~k---~~~~~~~prLalNcVGGks-a~~iar~L~~G-gtmvTYGGM-SkqPv~~~ts~lIFKdl~~rGfWvt~W~  293 (354)
T KOG0025|consen  220 RDRKMKK---FKGDNPRPRLALNCVGGKS-ATEIARYLERG-GTMVTYGGM-SKQPVTVPTSLLIFKDLKLRGFWVTRWK  293 (354)
T ss_pred             cchhhhh---hhccCCCceEEEeccCchh-HHHHHHHHhcC-ceEEEecCc-cCCCcccccchheeccceeeeeeeeehh
Confidence            2222211   11122 7899999999988 77899999998 999999984 4456666665554 49999999988876


Q ss_pred             ch--------hhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCc--eeeEEEEe
Q 017457          317 PR--------SDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGK--SLRCIIWM  367 (371)
Q Consensus       317 ~~--------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~--~~kvvv~~  367 (371)
                      ..        +.+.++.++++.|++..+  -....+|++...|++...+.-  ..|-++.+
T Consensus       294 ~~~~~pe~~~~~i~~~~~l~~~G~i~~~--~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~  352 (354)
T KOG0025|consen  294 KEHKSPEERKEMIDELCDLYRRGKLKAP--NCEKVPLADHKTALDAALSKFGKSGKQIIVL  352 (354)
T ss_pred             hccCCcHHHHHHHHHHHHHHHcCeeccc--cceeeechhhhHHHHHHHHHhccCCceEEEe
Confidence            31        345778899999987655  336789999999988776533  23555544

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=1.4e-38  Score=298.71  Aligned_cols=303  Identities=20%  Similarity=0.229  Sum_probs=242.7

Q ss_pred             CCCCcEEEEEec----CCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccc--cEEEEEeCCCCCCcCCCC
Q 017457            5 PGKPLVIEEIEV----EPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEA--VGVVESVGEYVEEVKERD   78 (371)
Q Consensus         5 ~~~~l~~~~~~~----~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~--~G~Vv~vG~~v~~~~~Gd   78 (371)
                      +.+.|++++.++    |+|+++||||||+|++||+.|++...|..... ...|+++|++.  .|++..+|+.++.|++||
T Consensus        17 ~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~-~~~p~~~g~~~~g~~~~~~v~~~v~~~~vGd   95 (338)
T cd08295          17 KESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSL-YLPPFKPGEVITGYGVAKVVDSGNPDFKVGD   95 (338)
T ss_pred             CccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccc-cCCCcCCCCeEeccEEEEEEecCCCCCCCCC
Confidence            334688998887    88999999999999999999999888854321 14577888754  456666888888999999


Q ss_pred             EEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeec-ceeEECC-CCC
Q 017457           79 LVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI-THVVKIT-PHI  156 (371)
Q Consensus        79 ~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~-~~~~~~P-~~l  156 (371)
                      +|...                                                    |+|+||+++++ ..++++| +++
T Consensus        96 ~V~~~----------------------------------------------------g~~aey~~v~~~~~~~~lp~~~~  123 (338)
T cd08295          96 LVWGF----------------------------------------------------TGWEEYSLIPRGQDLRKIDHTDV  123 (338)
T ss_pred             EEEec----------------------------------------------------CCceeEEEecchhceeecCCCCC
Confidence            99431                                                    38999999999 7999995 678


Q ss_pred             Ccc-hhhccccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcceEE
Q 017457          157 PLG-IACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFI  233 (371)
Q Consensus       157 ~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~  233 (371)
                      ++. +++.+++++.|||+++.+..++++|++|||+|+ |++|++++|+|+++|+ +|+++++++++.+.+++ +|+++++
T Consensus       124 ~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~~~lGa~~vi  202 (338)
T cd08295         124 PLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLKNKLGFDDAF  202 (338)
T ss_pred             CHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCceeE
Confidence            887 788899999999998877889999999999998 9999999999999999 89999999999999998 9999999


Q ss_pred             cCCCCCCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCc----eecCHHHHh-cCceEE
Q 017457          234 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP----ISLNSIEIL-KGRSVC  308 (371)
Q Consensus       234 ~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~----~~~~~~~~~-~~~~~~  308 (371)
                      ++.+  ..++.+.+++.+++++|++||++|+.. +..++++++++ |+++.+|.......    ...+...++ +++++.
T Consensus       203 ~~~~--~~~~~~~i~~~~~~gvd~v~d~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~  278 (338)
T cd08295         203 NYKE--EPDLDAALKRYFPNGIDIYFDNVGGKM-LDAVLLNMNLH-GRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQ  278 (338)
T ss_pred             EcCC--cccHHHHHHHhCCCCcEEEEECCCHHH-HHHHHHHhccC-cEEEEecccccCCCCCCCCccCHHHHhhccceee
Confidence            8654  136777787777669999999999855 89999999998 99999986332111    112233333 367888


Q ss_pred             EeeccCCCc--hhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEe
Q 017457          309 GTYFGGLKP--RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM  367 (371)
Q Consensus       309 g~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~  367 (371)
                      ++....+..  .+.++++++++.+|++.+.  +...|+++++++|++.+.+++.. |+++++
T Consensus       279 g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~  338 (338)
T cd08295         279 GFLVGDYLHRYPEFLEEMSGYIKEGKLKYV--EDIADGLESAPEAFVGLFTGSNIGKQVVKV  338 (338)
T ss_pred             EEEehhhHHHHHHHHHHHHHHHHCCCeEce--eecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence            765443321  2347788999999987754  34669999999999999887765 988864

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.4e-38  Score=294.78  Aligned_cols=307  Identities=21%  Similarity=0.367  Sum_probs=254.6

Q ss_pred             CCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccC
Q 017457            6 GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH   85 (371)
Q Consensus         6 ~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~   85 (371)
                      ..+++++++|.|+|.++||+||+.++++|++|.....|.++     +|.++|||++|+|+++|++   +++||+|...+.
T Consensus         9 ~~~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~-----~~~~~G~e~~G~Vv~~G~~---~~~G~~V~~~~~   80 (319)
T cd08242           9 GLDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP-----FPGVPGHEFVGIVEEGPEA---ELVGKRVVGEIN   80 (319)
T ss_pred             CCcEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC-----CCCccCceEEEEEEEeCCC---CCCCCeEEECCC
Confidence            44689999999999999999999999999999998888653     5678999999999999998   689999999999


Q ss_pred             CCCCCCccccCCCCCCCCCCCCCCCCCC-CCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcc
Q 017457           86 RDCGECRDCKSSKSNTCSKFGRGYRPNM-PRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLL  164 (371)
Q Consensus        86 ~~~~~c~~~~~~~~~~~~~~~~~~~~g~-~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~  164 (371)
                      ..|++|.+|..+..+.|...+.   .++ ..+                   |+|++|+.++.++++++|++++.++++.+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-------------------g~~~~~~~v~~~~~~~lP~~~~~~~aa~~  138 (319)
T cd08242          81 IACGRCEYCRRGLYTHCPNRTV---LGIVDRD-------------------GAFAEYLTLPLENLHVVPDLVPDEQAVFA  138 (319)
T ss_pred             cCCCCChhhhCcCcccCCCCcc---cCccCCC-------------------CceEEEEEechHHeEECcCCCCHHHhhhh
Confidence            9999999999999988886553   333 123                   38999999999999999999999888764


Q ss_pred             ccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHH
Q 017457          165 SCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVS  244 (371)
Q Consensus       165 ~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~  244 (371)
                       ....+++. +.+..+++++++|||+|+|.+|++++|+|+.+|+ +|+++++++++.+.++++|++.+++++.   .   
T Consensus       139 -~~~~~~~~-~~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~---~---  209 (319)
T cd08242         139 -EPLAAALE-ILEQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLGVETVLPDEA---E---  209 (319)
T ss_pred             -hHHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEeCccc---c---
Confidence             34556665 5577889999999999889999999999999999 7999999999999999999988877644   1   


Q ss_pred             HHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhhHH
Q 017457          245 QVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIA  322 (371)
Q Consensus       245 ~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~  322 (371)
                            +.+ ++|+++|++|+...+..++++++++ |+++..+....  ...++...+.. +.++.+....      .++
T Consensus       210 ------~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~------~~~  274 (319)
T cd08242         210 ------SEGGGFDVVVEATGSPSGLELALRLVRPR-GTVVLKSTYAG--PASFDLTKAVVNEITLVGSRCG------PFA  274 (319)
T ss_pred             ------ccCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccCC--CCccCHHHheecceEEEEEecc------cHH
Confidence                  233 8999999999866689999999998 99998765322  23444444443 6777776432      378


Q ss_pred             HHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEE
Q 017457          323 TLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIW  366 (371)
Q Consensus       323 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~  366 (371)
                      +++++++++++++.+++++.|+++++++||+.+.++...|++++
T Consensus       275 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~vi~  318 (319)
T cd08242         275 PALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPGALKVLLR  318 (319)
T ss_pred             HHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCCceEEEeC
Confidence            89999999988666667899999999999999987765698875

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=100.00  E-value=4.3e-38  Score=296.06  Aligned_cols=327  Identities=27%  Similarity=0.467  Sum_probs=268.5

Q ss_pred             CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCC
Q 017457            7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHR   86 (371)
Q Consensus         7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~   86 (371)
                      ..+.+++.+.|+++++||+||+.++++|+.|+....+.+. .  ..|.++|+|++|+|+++|++++.|++||+|+..+..
T Consensus        10 ~~l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~-~--~~~~~~g~~~~G~V~~~g~~v~~~~~Gd~V~~~~~~   86 (343)
T cd08236          10 GDLRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGA-Y--HPPLVLGHEFSGTVEEVGSGVDDLAVGDRVAVNPLL   86 (343)
T ss_pred             CceeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCC-C--CCCcccCcceEEEEEEECCCCCcCCCCCEEEEcCCC
Confidence            4588889999999999999999999999999998877652 2  457789999999999999999999999999999888


Q ss_pred             CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcccc
Q 017457           87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC  166 (371)
Q Consensus        87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~  166 (371)
                      .|+.|++|..+.++.|+....   .|....                   |+|++|+.+++++++++|+++++++++.+ .
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~  143 (343)
T cd08236          87 PCGKCEYCKKGEYSLCSNYDY---IGSRRD-------------------GAFAEYVSVPARNLIKIPDHVDYEEAAMI-E  143 (343)
T ss_pred             CCCCChhHHCcChhhCCCcce---EecccC-------------------CcccceEEechHHeEECcCCCCHHHHHhc-c
Confidence            999999999999999976432   332233                   49999999999999999999999999887 4


Q ss_pred             chhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHH
Q 017457          167 GVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV  246 (371)
Q Consensus       167 ~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~  246 (371)
                      .+++||+++. ...++++++|||+|+|.+|++++|+|+++|+++|+++++++++.+.++++|++.+++++.   .. .++
T Consensus       144 ~~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~---~~-~~~  218 (343)
T cd08236         144 PAAVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE---ED-VEK  218 (343)
T ss_pred             hHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcc---cc-HHH
Confidence            7889999874 778999999999988999999999999999944999999999999999999999998876   55 677


Q ss_pred             HHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCce-ecCHHHH-hcCceEEEeeccCCC--chhhH
Q 017457          247 IKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPI-SLNSIEI-LKGRSVCGTYFGGLK--PRSDI  321 (371)
Q Consensus       247 i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~-~~~~~~~-~~~~~~~g~~~~~~~--~~~~~  321 (371)
                      +.+.+++ ++|++|||++....+..++++++++ |+++.+|........ ..+...+ .++.++.++......  ..+.+
T Consensus       219 ~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (343)
T cd08236         219 VRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEW  297 (343)
T ss_pred             HHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccccchhhH
Confidence            7777776 8999999998776689999999998 999999864322111 1222223 337888887643221  24568


Q ss_pred             HHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhc-Ccee-eEEE
Q 017457          322 ATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLE-GKSL-RCII  365 (371)
Q Consensus       322 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~-~~~~-kvvv  365 (371)
                      ++++++++++.+.+.+++.+.+++++++++++.+.+ +... |+++
T Consensus       298 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~  343 (343)
T cd08236         298 RTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL  343 (343)
T ss_pred             HHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence            889999999987644446689999999999999988 5444 7663

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=2.7e-38  Score=297.66  Aligned_cols=300  Identities=19%  Similarity=0.211  Sum_probs=232.6

Q ss_pred             CcEEEEEecCCCC-CCeEEEEEeEeecccccccccc---cCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457            8 PLVIEEIEVEPPK-AWEIRIKILCTSLCHSDVTFWK---SSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI   83 (371)
Q Consensus         8 ~l~~~~~~~~~~~-~~eVlVkv~~~~i~~~D~~~~~---g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~   83 (371)
                      .+++++.|.|+|. ++||||||.|++||+.|.....   +.....  .+|.++|||++|+|+++|+++++|++||+|+.+
T Consensus        22 ~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~--~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~   99 (345)
T cd08293          22 NFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLA--PWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF   99 (345)
T ss_pred             ceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCC--CccCCCceEeeEEEEEeccCCCCCCCCCEEEec
Confidence            4788899999874 9999999999999998853322   211112  467889999999999999999999999999542


Q ss_pred             cCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcch---
Q 017457           84 FHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI---  160 (371)
Q Consensus        84 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~---  160 (371)
                      .                                                   ++|+||+++++++++++|+++++.+   
T Consensus       100 ~---------------------------------------------------~~~ae~~~v~~~~~~~iP~~~~~~~~~~  128 (345)
T cd08293         100 N---------------------------------------------------WPWQTYAVLDGSSLEKVDPQLVDGHLSY  128 (345)
T ss_pred             C---------------------------------------------------CCceeEEEecHHHeEEcCccccccchhH
Confidence            1                                                   2799999999999999999864432   


Q ss_pred             -hhccccchhhhHHHHHHHcCCCCC--CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcceEEcC
Q 017457          161 -ACLLSCGVSTGVGAAWKVAGVEVG--STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINP  235 (371)
Q Consensus       161 -aa~~~~~~~ta~~~l~~~~~~~~g--~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~  235 (371)
                       +++++.++.|||+++....++++|  ++|||+|+ |++|++++|+|+++|+++|+++++++++.+.+++ +|+++++++
T Consensus       129 ~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~  208 (345)
T cd08293         129 FLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINY  208 (345)
T ss_pred             HhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEEC
Confidence             455677899999988777788877  99999998 9999999999999998679999999999999876 999999998


Q ss_pred             CCCCCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCC-Cce----ecC--HHHHhc--Cce
Q 017457          236 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG-SPI----SLN--SIEILK--GRS  306 (371)
Q Consensus       236 ~~~~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-~~~----~~~--~~~~~~--~~~  306 (371)
                      .+   .++.+.+++++++++|++||++|+.. +..++++++++ |+++.+|..... ...    .+.  ...+..  +.+
T Consensus       209 ~~---~~~~~~i~~~~~~gvd~vid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (345)
T cd08293         209 KT---DNVAERLRELCPEGVDVYFDNVGGEI-SDTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPEATEAILKERNIT  283 (345)
T ss_pred             CC---CCHHHHHHHHCCCCceEEEECCCcHH-HHHHHHHhccC-CEEEEEeeeecccCccCccccccchhHHHhhhcceE
Confidence            77   78888888887679999999999877 79999999998 999999852211 001    111  111222  333


Q ss_pred             EEEeeccCCC--chhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEe
Q 017457          307 VCGTYFGGLK--PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM  367 (371)
Q Consensus       307 ~~g~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~  367 (371)
                      +.+.......  ..+.+++++++++++++.+.  ....++++++++|++.+.+++.. |+++.+
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~  345 (345)
T cd08293         284 RERFLVLNYKDKFEEAIAQLSQWVKEGKLKVK--ETVYEGLENAGEAFQSMMNGGNIGKQIVKV  345 (345)
T ss_pred             EEEEEeeccHhHHHHHHHHHHHHHHCCCccce--eEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence            3333222211  12346778899999987654  33557999999999999887765 998864

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=2.5e-38  Score=295.49  Aligned_cols=293  Identities=22%  Similarity=0.276  Sum_probs=235.2

Q ss_pred             CCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccC
Q 017457            6 GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH   85 (371)
Q Consensus         6 ~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~   85 (371)
                      ...+++.+.|.|+|++|||||||.|+++|+.|.   .|.+...  ..|.++|.|++|+|+++|+   .|++||+|+..  
T Consensus        16 ~~~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~---~g~~~~~--~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~--   85 (325)
T TIGR02825        16 DSDFELKTVELPPLNNGEVLLEALFLSVDPYMR---VAAKRLK--EGDTMMGQQVARVVESKNV---ALPKGTIVLAS--   85 (325)
T ss_pred             CCceEEEeccCCCCCCCcEEEEEEEEecCHHHh---cccCcCC--CCCcEecceEEEEEEeCCC---CCCCCCEEEEe--
Confidence            345888999999999999999999999999644   3443332  4577999999999999874   59999999542  


Q ss_pred             CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEEC----CCCCCcchh
Q 017457           86 RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI----TPHIPLGIA  161 (371)
Q Consensus        86 ~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~----P~~l~~~~a  161 (371)
                                                                        ++|++|+.++.+++.++    |++++++++
T Consensus        86 --------------------------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~a  115 (325)
T TIGR02825        86 --------------------------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLA  115 (325)
T ss_pred             --------------------------------------------------cCceeeEEechhheEEccccccCCCCHHHH
Confidence                                                              26889999999988887    899999987


Q ss_pred             -hccccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCC
Q 017457          162 -CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG  239 (371)
Q Consensus       162 -a~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~  239 (371)
                       +++++++.|||+++.+..++++|++|||+|+ |++|++++|+||++|+ +|+++++++++.++++++|+++++++++  
T Consensus       116 aa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~--  192 (325)
T TIGR02825       116 LGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKT--  192 (325)
T ss_pred             HHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeccc--
Confidence             6788899999998888899999999999996 9999999999999999 8999999999999999999999998765  


Q ss_pred             CccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCC---cee--cCHHH-HhcCceEEEeecc
Q 017457          240 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGS---PIS--LNSIE-ILKGRSVCGTYFG  313 (371)
Q Consensus       240 ~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~---~~~--~~~~~-~~~~~~~~g~~~~  313 (371)
                      ...+.+.++..+++++|++||++|+.. +..++++++++ |+++.+|......   ...  ..... ++.++++.++...
T Consensus       193 ~~~~~~~~~~~~~~gvdvv~d~~G~~~-~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  270 (325)
T TIGR02825       193 VKSLEETLKKASPDGYDCYFDNVGGEF-SNTVIGQMKKF-GRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVN  270 (325)
T ss_pred             cccHHHHHHHhCCCCeEEEEECCCHHH-HHHHHHHhCcC-cEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEeh
Confidence            124555566665558999999999876 79999999998 9999998632110   111  11222 3347778777543


Q ss_pred             CCC---chhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEE
Q 017457          314 GLK---PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII  365 (371)
Q Consensus       314 ~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv  365 (371)
                      .+.   ..+.++++++++++|++.+.  +...|+++++++|++.+.+++.. |+++
T Consensus       271 ~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvVv  324 (325)
T TIGR02825       271 RWQGEVRQKALKELLKWVLEGKIQYK--EYVIEGFENMPAAFMGMLKGENLGKTIV  324 (325)
T ss_pred             hhhhhhhHHHHHHHHHHHHCCCcccc--eeccccHHHHHHHHHHHhcCCCCCeEEe
Confidence            322   13467889999999988765  44678999999999999887765 8876

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=100.00  E-value=1.2e-37  Score=291.82  Aligned_cols=321  Identities=26%  Similarity=0.476  Sum_probs=267.9

Q ss_pred             CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCC
Q 017457            7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHR   86 (371)
Q Consensus         7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~   86 (371)
                      .++++.+.+.|++.++||+||+.++++|+.|+....|.++.   .+|.++|+|++|+|+++|++++++++||+|++.+..
T Consensus        10 ~~~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~---~~p~~~g~~~~G~v~~vG~~v~~~~~Gd~V~~~~~~   86 (334)
T cd08234          10 GELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA---APPLVPGHEFAGVVVAVGSKVTGFKVGDRVAVDPNI   86 (334)
T ss_pred             CceEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC---CCCcccccceEEEEEEeCCCCCCCCCCCEEEEcCCc
Confidence            36888999999999999999999999999999988887642   367899999999999999999999999999999999


Q ss_pred             CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcccc
Q 017457           87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC  166 (371)
Q Consensus        87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~  166 (371)
                      .|+.|.+|..+.+++|+..+.   .|....|                   +|++|+.++.++++++|+++++.+++.+ +
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~  143 (334)
T cd08234          87 YCGECFYCRRGRPNLCENLTA---VGVTRNG-------------------GFAEYVVVPAKQVYKIPDNLSFEEAALA-E  143 (334)
T ss_pred             CCCCCccccCcChhhCCCcce---eccCCCC-------------------cceeEEEecHHHcEECcCCCCHHHHhhh-h
Confidence            999999999999999987752   3333344                   8999999999999999999999998876 6


Q ss_pred             chhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHH
Q 017457          167 GVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV  246 (371)
Q Consensus       167 ~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~  246 (371)
                      .+.++++++ ...+++++++|||+|+|.+|.+++++|+++|+++|+++++++++.+.++++|++.++++++   .++...
T Consensus       144 ~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~  219 (334)
T cd08234         144 PLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSR---EDPEAQ  219 (334)
T ss_pred             HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCC---CCHHHH
Confidence            788899876 7789999999999988999999999999999944899999999999999999988888766   455444


Q ss_pred             HHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHh-cCceEEEeeccCCCchhhHHHH
Q 017457          247 IKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGGLKPRSDIATL  324 (371)
Q Consensus       247 i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~  324 (371)
                        +.+.+ ++|++||+++.......++++++++ |+++.+|.........++...++ .+.++.+....    ...++++
T Consensus       220 --~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~  292 (334)
T cd08234         220 --KEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN----PYTFPRA  292 (334)
T ss_pred             --HHhcCCCCcEEEECCCChHHHHHHHHHHhcC-CEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC----HHHHHHH
Confidence              34444 8999999998766688999999998 99999986433233445555444 37777776422    3468889


Q ss_pred             HHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEE
Q 017457          325 AQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII  365 (371)
Q Consensus       325 ~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv  365 (371)
                      +++++++++.+.+++++.+++++++++++.+.+ ... |+++
T Consensus       293 ~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi  333 (334)
T cd08234         293 IALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV  333 (334)
T ss_pred             HHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence            999999988765556789999999999999988 444 7775

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.2e-37  Score=292.18  Aligned_cols=325  Identities=22%  Similarity=0.352  Sum_probs=272.2

Q ss_pred             CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCC
Q 017457            7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHR   86 (371)
Q Consensus         7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~   86 (371)
                      ..+.+.+.+.|++.+++|+|++.++++|++|++++.|..... ..+|.++|||++|+|+.+|++++.|++||+|++.+..
T Consensus        13 ~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~   91 (342)
T cd08266          13 EVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIK-LPLPHILGSDGAGVVEAVGPGVTNVKPGQRVVIYPGI   91 (342)
T ss_pred             cceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCC-CCCCeecccceEEEEEEeCCCCCCCCCCCEEEEcccc
Confidence            347777888888999999999999999999999888865422 1567899999999999999999999999999999999


Q ss_pred             CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcccc
Q 017457           87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC  166 (371)
Q Consensus        87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~  166 (371)
                      .|+.|++|.++.++.|+....   .|....|                   +|++|+.++.+.++++|+++++.+++.+++
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~---~g~~~~g-------------------~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~  149 (342)
T cd08266          92 SCGRCEYCLAGRENLCAQYGI---LGEHVDG-------------------GYAEYVAVPARNLLPIPDNLSFEEAAAAPL  149 (342)
T ss_pred             ccccchhhccccccccccccc---cccccCc-------------------ceeEEEEechHHceeCCCCCCHHHHHhhhh
Confidence            999999999999999986543   4443343                   899999999999999999999999999999


Q ss_pred             chhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHH
Q 017457          167 GVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQ  245 (371)
Q Consensus       167 ~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~  245 (371)
                      ++.+|++++.....+.++++++|+|+ +++|+++++++++.|+ +|+++++++++.+.+..++.+.+++...   .++.+
T Consensus       150 ~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~  225 (342)
T cd08266         150 TFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVIDYRK---EDFVR  225 (342)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEecCC---hHHHH
Confidence            99999998878888999999999998 7999999999999999 8999999999999888888887787655   56777


Q ss_pred             HHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHH-HhcCceEEEeeccCCCchhhHHH
Q 017457          246 VIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGTYFGGLKPRSDIAT  323 (371)
Q Consensus       246 ~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~  323 (371)
                      .+.+.+.+ ++|+++++.|... +...+++++++ |+++.++..... ...++... +..+.++.+.....   ...+.+
T Consensus       226 ~~~~~~~~~~~d~~i~~~g~~~-~~~~~~~l~~~-G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~  299 (342)
T cd08266         226 EVRELTGKRGVDVVVEHVGAAT-WEKSLKSLARG-GRLVTCGATTGY-EAPIDLRHVFWRQLSILGSTMGT---KAELDE  299 (342)
T ss_pred             HHHHHhCCCCCcEEEECCcHHH-HHHHHHHhhcC-CEEEEEecCCCC-CCCcCHHHHhhcceEEEEEecCC---HHHHHH
Confidence            77777766 8999999999876 88999999998 999999864332 22344423 34478888775433   457888


Q ss_pred             HHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEE
Q 017457          324 LAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW  366 (371)
Q Consensus       324 ~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~  366 (371)
                      ++++++++.+.+  .+++.|+++++++|++.+.++... |++++
T Consensus       300 ~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  341 (342)
T cd08266         300 ALRLVFRGKLKP--VIDSVFPLEEAAEAHRRLESREQFGKIVLT  341 (342)
T ss_pred             HHHHHHcCCccc--ceeeeEcHHHHHHHHHHHHhCCCCceEEEe
Confidence            999999997653  367899999999999999876655 88875

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=5e-38  Score=293.09  Aligned_cols=298  Identities=22%  Similarity=0.258  Sum_probs=250.9

Q ss_pred             CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457            8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD   87 (371)
Q Consensus         8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~   87 (371)
                      .++++++|.|++.++||+|||.++++|++|++.+.|.++... .+|.++|||++|+|+++|++++++++||+|++...  
T Consensus        15 ~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~-~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~--   91 (324)
T cd08292          15 VLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKP-ELPAIGGSEAVGVVDAVGEGVKGLQVGQRVAVAPV--   91 (324)
T ss_pred             eEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCC-CCCCCCCcceEEEEEEeCCCCCCCCCCCEEEeccC--
Confidence            378889999999999999999999999999999988765321 56889999999999999999999999999966421  


Q ss_pred             CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccc
Q 017457           88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG  167 (371)
Q Consensus        88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~  167 (371)
                                                  .                   |+|++|+.+++..++++|+++++++++.+++.
T Consensus        92 ----------------------------~-------------------g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~  124 (324)
T cd08292          92 ----------------------------H-------------------GTWAEYFVAPADGLVPLPDGISDEVAAQLIAM  124 (324)
T ss_pred             ----------------------------C-------------------CcceeEEEEchHHeEECCCCCCHHHhhhcccc
Confidence                                        1                   48999999999999999999999999999989


Q ss_pred             hhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHH
Q 017457          168 VSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV  246 (371)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~  246 (371)
                      +.+||+++ ...++++|++|||+|+ |.+|++++|+|+++|+ +++++..++++.+.++++|+++++++++   .++.+.
T Consensus       125 ~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~  199 (324)
T cd08292         125 PLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVVSTEQ---PGWQDK  199 (324)
T ss_pred             HHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEEcCCC---chHHHH
Confidence            99999865 5588999999999987 9999999999999999 8999988999989888899999998877   678888


Q ss_pred             HHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHh-cCceEEEeeccCCC-------c
Q 017457          247 IKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGGLK-------P  317 (371)
Q Consensus       247 i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~-------~  317 (371)
                      +.+++++ ++|++||++|+.. ...++++++++ |+++.+|.. ......++...++ ++.++.++....+.       .
T Consensus       200 i~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~-g~~v~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (324)
T cd08292         200 VREAAGGAPISVALDSVGGKL-AGELLSLLGEG-GTLVSFGSM-SGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYR  276 (324)
T ss_pred             HHHHhCCCCCcEEEECCCChh-HHHHHHhhcCC-cEEEEEecC-CCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHH
Confidence            9999887 9999999999876 88999999998 999999864 2223344443333 48888887654321       1


Q ss_pred             hhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEE
Q 017457          318 RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII  365 (371)
Q Consensus       318 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv  365 (371)
                      ...++.+++++.++.+.+.  +.+.|+++++++|++.+.++... |+++
T Consensus       277 ~~~~~~~~~l~~~g~i~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvvv  323 (324)
T cd08292         277 KRMIAELLTLALKGQLLLP--VEAVFDLGDAAKAAAASMRPGRAGKVLL  323 (324)
T ss_pred             HHHHHHHHHHHHCCCccCc--cccEecHHHHHHHHHHHHcCCCCceEEe
Confidence            2467889999999987654  35889999999999998876554 7775

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=7.1e-38  Score=292.36  Aligned_cols=308  Identities=25%  Similarity=0.368  Sum_probs=253.1

Q ss_pred             CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCC
Q 017457            7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHR   86 (371)
Q Consensus         7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~   86 (371)
                      +.+++++.+.|+++++||+||+.++++|++|++...+. ...  .+|.++|||++|+|+++|++++.|++||+|++.+..
T Consensus        12 ~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~-~~~--~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~   88 (325)
T cd08264          12 ENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAV-KVK--PMPHIPGAEFAGVVEEVGDHVKGVKKGDRVVVYNRV   88 (325)
T ss_pred             CceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCC-CCC--CCCeecccceeEEEEEECCCCCCCCCCCEEEECCCc
Confidence            45888888888899999999999999999999887642 222  357789999999999999999999999999999999


Q ss_pred             CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcccc
Q 017457           87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC  166 (371)
Q Consensus        87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~  166 (371)
                      .|++|++|..+.+++|.....   .|+...|                   +|++|+.++++.++++|+++++++++.+++
T Consensus        89 ~~~~c~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~  146 (325)
T cd08264          89 FDGTCDMCLSGNEMLCRNGGI---IGVVSNG-------------------GYAEYIVVPEKNLFKIPDSISDELAASLPV  146 (325)
T ss_pred             CCCCChhhcCCCccccCccce---eeccCCC-------------------ceeeEEEcCHHHceeCCCCCCHHHhhhhhh
Confidence            999999999999999986542   3433333                   899999999999999999999999999999


Q ss_pred             chhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHH
Q 017457          167 GVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQ  245 (371)
Q Consensus       167 ~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~  245 (371)
                      ++.+||+++. ..++++|++|+|+|+ |++|++++++|+++|+ +|+++.    +.+.++++|++++++.++     ..+
T Consensus       147 ~~~~a~~~l~-~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-~v~~~~----~~~~~~~~g~~~~~~~~~-----~~~  215 (325)
T cd08264         147 AALTAYHALK-TAGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAVS----RKDWLKEFGADEVVDYDE-----VEE  215 (325)
T ss_pred             hhHHHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEe----HHHHHHHhCCCeeecchH-----HHH
Confidence            9999999865 488999999999998 9999999999999999 788876    246777899988887643     345


Q ss_pred             HHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhhHHHH
Q 017457          246 VIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATL  324 (371)
Q Consensus       246 ~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~  324 (371)
                      .+.+++ +++|+++|++|+.. +...+++++++ |+++.+|.. ......++...+.. +.++.++..+.   ++.++++
T Consensus       216 ~l~~~~-~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~  288 (325)
T cd08264         216 KVKEIT-KMADVVINSLGSSF-WDLSLSVLGRG-GRLVTFGTL-TGGEVKLDLSDLYSKQISIIGSTGGT---RKELLEL  288 (325)
T ss_pred             HHHHHh-CCCCEEEECCCHHH-HHHHHHhhccC-CEEEEEecC-CCCCCccCHHHHhhcCcEEEEccCCC---HHHHHHH
Confidence            566666 68999999999864 89999999998 999999863 22234555555554 67777764332   4678889


Q ss_pred             HHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee
Q 017457          325 AQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL  361 (371)
Q Consensus       325 ~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~  361 (371)
                      ++++...+  .  .+++.|+++++++|++.+.+++..
T Consensus       289 ~~l~~~~~--~--~~~~~~~~~~~~~a~~~~~~~~~~  321 (325)
T cd08264         289 VKIAKDLK--V--KVWKTFKLEEAKEALKELFSKERD  321 (325)
T ss_pred             HHHHHcCC--c--eeEEEEcHHHHHHHHHHHHcCCCc
Confidence            99886443  2  356899999999999998876543

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.6e-37  Score=289.11  Aligned_cols=320  Identities=33%  Similarity=0.507  Sum_probs=264.9

Q ss_pred             CCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeecc
Q 017457            5 PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIF   84 (371)
Q Consensus         5 ~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~   84 (371)
                      ++..+.+++.|.|++.+++|+|+++++++|++|++...|.++..  ..|.++|+|++|+|+++|++++.+++||+|++..
T Consensus         9 ~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~   86 (332)
T cd08259           9 PNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRG--KYPLILGHEIVGTVEEVGEGVERFKPGDRVILYY   86 (332)
T ss_pred             CCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCC--CCCeeccccceEEEEEECCCCccCCCCCEEEECC
Confidence            35678899999999999999999999999999999998876544  5678999999999999999999999999999999


Q ss_pred             CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcc
Q 017457           85 HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLL  164 (371)
Q Consensus        85 ~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~  164 (371)
                      ...|+.|++|..+.+++|... .  ..|....                   |+|++|+.++.+.++++|+++++++++.+
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~-------------------g~~~~~~~v~~~~~~~ip~~~~~~~~~~~  144 (332)
T cd08259          87 YIPCGKCEYCLSGEENLCRNR-A--EYGEEVD-------------------GGFAEYVKVPERSLVKLPDNVSDESAALA  144 (332)
T ss_pred             CCCCcCChhhhCCCcccCCCc-c--ccccccC-------------------CeeeeEEEechhheEECCCCCCHHHHhhh
Confidence            899999999999999999764 2  2333333                   48999999999999999999999999999


Q ss_pred             ccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccH
Q 017457          165 SCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTV  243 (371)
Q Consensus       165 ~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~  243 (371)
                      ++++.+||+++.. ..+++++++||+|+ |++|++++++++..|+ +|+++.+++++.+.++++|.+.+++.+     ++
T Consensus       145 ~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~-----~~  217 (332)
T cd08259         145 ACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGS-----KF  217 (332)
T ss_pred             ccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecH-----HH
Confidence            9999999998765 88999999999997 9999999999999999 899999899999999888988777542     25


Q ss_pred             HHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHH-HhcCceEEEeeccCCCchhhHH
Q 017457          244 SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGTYFGGLKPRSDIA  322 (371)
Q Consensus       244 ~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~  322 (371)
                      .+.+.+..  ++|++++++|... ...++++++++ |+++.++...... ..++... .+++.++.++..   ....+++
T Consensus       218 ~~~~~~~~--~~d~v~~~~g~~~-~~~~~~~~~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~  289 (332)
T cd08259         218 SEDVKKLG--GADVVIELVGSPT-IEESLRSLNKG-GRLVLIGNVTPDP-APLRPGLLILKEIRIIGSIS---ATKADVE  289 (332)
T ss_pred             HHHHHhcc--CCCEEEECCChHH-HHHHHHHhhcC-CEEEEEcCCCCCC-cCCCHHHHHhCCcEEEEecC---CCHHHHH
Confidence            55555443  7999999999877 88999999998 9999998643221 1222222 234666666531   2356788


Q ss_pred             HHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEE
Q 017457          323 TLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII  365 (371)
Q Consensus       323 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv  365 (371)
                      +++++++++.+.+  .+++.|+++++++|++.+.+++.. |+++
T Consensus       290 ~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~  331 (332)
T cd08259         290 EALKLVKEGKIKP--VIDRVVSLEDINEALEDLKSGKVVGRIVL  331 (332)
T ss_pred             HHHHHHHcCCCcc--ceeEEEcHHHHHHHHHHHHcCCcccEEEe
Confidence            9999999997653  366899999999999999887765 7776

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.8e-37  Score=290.08  Aligned_cols=311  Identities=24%  Similarity=0.357  Sum_probs=259.8

Q ss_pred             CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeecc-CC
Q 017457            8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIF-HR   86 (371)
Q Consensus         8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~-~~   86 (371)
                      ++.+.+.+.|.+.++||+||+.++++|++|++...|.++..  .+|.++|||++|+|+++|++++++++||+|++.+ ..
T Consensus        16 ~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~   93 (329)
T cd08298          16 PLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPP--KLPLIPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGS   93 (329)
T ss_pred             CceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCC--CCCccccccccEEEEEECCCCCCCcCCCEEEEeccCC
Confidence            58888888888999999999999999999999988876544  6788999999999999999999999999997654 46


Q ss_pred             CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcccc
Q 017457           87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC  166 (371)
Q Consensus        87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~  166 (371)
                      .|+.|.+|..+.+++|.....   .|+..+|                   +|++|+.++.+.++++|+++++.+++.+++
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~  151 (329)
T cd08298          94 TCGECRYCRSGRENLCDNARF---TGYTVDG-------------------GYAEYMVADERFAYPIPEDYDDEEAAPLLC  151 (329)
T ss_pred             CCCCChhHhCcChhhCCCccc---cccccCC-------------------ceEEEEEecchhEEECCCCCCHHHhhHhhh
Confidence            799999999999999987764   4444444                   899999999999999999999999999999


Q ss_pred             chhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHH
Q 017457          167 GVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV  246 (371)
Q Consensus       167 ~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~  246 (371)
                      ++.|||+++ +.++++++++|||+|+|++|++++++|++.|+ +|+++++++++++.++++|++++++.+.   .     
T Consensus       152 ~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~-----  221 (329)
T cd08298         152 AGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAGDSDD---L-----  221 (329)
T ss_pred             hhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEeccCc---c-----
Confidence            999999987 88999999999999999999999999999999 8999999999999999999988887654   1     


Q ss_pred             HHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCchhhHHHHHH
Q 017457          247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQ  326 (371)
Q Consensus       247 i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  326 (371)
                          .++++|+++++.+....++.++++++++ |+++.+|... .....++...+..+..+.+....   ..+.++++++
T Consensus       222 ----~~~~vD~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~  292 (329)
T cd08298         222 ----PPEPLDAAIIFAPVGALVPAALRAVKKG-GRVVLAGIHM-SDIPAFDYELLWGEKTIRSVANL---TRQDGEEFLK  292 (329)
T ss_pred             ----CCCcccEEEEcCCcHHHHHHHHHHhhcC-CEEEEEcCCC-CCCCccchhhhhCceEEEEecCC---CHHHHHHHHH
Confidence                1237999999877666689999999998 9999988532 12223333334446666665322   2456888999


Q ss_pred             HHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEE
Q 017457          327 KYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCI  364 (371)
Q Consensus       327 ~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvv  364 (371)
                      +++++.+.+  . .+.|+++++++|++.+.+++.. |++
T Consensus       293 l~~~~~l~~--~-~~~~~~~~~~~a~~~~~~~~~~~~~v  328 (329)
T cd08298         293 LAAEIPIKP--E-VETYPLEEANEALQDLKEGRIRGAAV  328 (329)
T ss_pred             HHHcCCCCc--e-EEEEeHHHHHHHHHHHHcCCCcceee
Confidence            999997764  2 4889999999999999887665 665

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=100.00  E-value=7.4e-37  Score=286.09  Aligned_cols=321  Identities=27%  Similarity=0.445  Sum_probs=262.8

Q ss_pred             cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457            4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI   83 (371)
Q Consensus         4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~   83 (371)
                      +++.++++++.|.|++.+++|+|++.++++|++|++...|.+...  .+|.++|||++|+|+++|++++++++||+|++.
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~--~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~   84 (330)
T cd08245           7 AAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGS--KYPLVPGHEIVGEVVEVGAGVEGRKVGDRVGVG   84 (330)
T ss_pred             cCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCC--CCCcccCccceEEEEEECCCCcccccCCEEEEc
Confidence            344579999999999999999999999999999999988876433  568899999999999999999999999999875


Q ss_pred             cC-CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhh
Q 017457           84 FH-RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC  162 (371)
Q Consensus        84 ~~-~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa  162 (371)
                      +. ..|+.|.+|..+..++|.....   .++...|                   +|++|+.++.++++++|+++++.+++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~p~~~~~~~~~  142 (330)
T cd08245          85 WLVGSCGRCEYCRRGLENLCQKAVN---TGYTTQG-------------------GYAEYMVADAEYTVLLPDGLPLAQAA  142 (330)
T ss_pred             cccCCCCCChhhhCcCcccCcCccc---cCcccCC-------------------ccccEEEEcHHHeEECCCCCCHHHhh
Confidence            54 6799999999999999987542   3332333                   89999999999999999999999999


Q ss_pred             ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457          163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT  242 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~  242 (371)
                      .+++.+.+||+++.. ..+.++++|||+|+|.+|++++++|+.+|+ +|+++++++++.+.++++|++.+++...   ..
T Consensus       143 ~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~  217 (330)
T cd08245         143 PLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGA---EL  217 (330)
T ss_pred             hhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCC---cc
Confidence            999999999997644 789999999999888899999999999999 8999999999999999999988887654   33


Q ss_pred             HHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhhH
Q 017457          243 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDI  321 (371)
Q Consensus       243 ~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~  321 (371)
                      ....    ..+++|+++|+++.......++++++++ |+++.++.... ....+....+.. +.++.++....   ...+
T Consensus       218 ~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~  288 (330)
T cd08245         218 DEQA----AAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPES-PPFSPDIFPLIMKRQSIAGSTHGG---RADL  288 (330)
T ss_pred             hHHh----ccCCCCEEEECCCcHHHHHHHHHhcccC-CEEEEECCCCC-CccccchHHHHhCCCEEEEeccCC---HHHH
Confidence            3222    2247999999988766689999999998 99999986422 222222333444 67777775432   4578


Q ss_pred             HHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEE
Q 017457          322 ATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII  365 (371)
Q Consensus       322 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv  365 (371)
                      +.+++++.++.+.+  .+ +.+++++++++|+.+.+++.. |+++
T Consensus       289 ~~~~~ll~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~~~~v~  330 (330)
T cd08245         289 QEALDFAAEGKVKP--MI-ETFPLDQANEAYERMEKGDVRFRFVL  330 (330)
T ss_pred             HHHHHHHHcCCCcc--eE-EEEcHHHHHHHHHHHHcCCCCcceeC
Confidence            88999999997764  33 789999999999999887665 6653

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=8.8e-37  Score=287.87  Aligned_cols=313  Identities=22%  Similarity=0.286  Sum_probs=250.5

Q ss_pred             CcEEEE-EecCCCCCCeEEEEEeEeecccccccccccCCCC------------------CCCCCCccccccccEEEEEeC
Q 017457            8 PLVIEE-IEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL------------------PKLPLPVIFGHEAVGVVESVG   68 (371)
Q Consensus         8 ~l~~~~-~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~------------------~~~~~p~~~G~e~~G~Vv~vG   68 (371)
                      .+.+.+ .+.|+|.+++|+|||.++++|++|+++..|.++.                  ....+|.++|||++|+|+++|
T Consensus        14 ~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG   93 (350)
T cd08274          14 KLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRIQGADIVGRVVAVG   93 (350)
T ss_pred             ceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcccCCcceEEEEEeC
Confidence            355544 4777889999999999999999999988776431                  012578899999999999999


Q ss_pred             CCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecce
Q 017457           69 EYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITH  148 (371)
Q Consensus        69 ~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~  148 (371)
                      +++++|++||+|++.+...|+.|+.|..     |..      .|...+                   |+|++|+.++...
T Consensus        94 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~-----~~~------~~~~~~-------------------g~~~~~~~v~~~~  143 (350)
T cd08274          94 EGVDTARIGERVLVDPSIRDPPEDDPAD-----IDY------IGSERD-------------------GGFAEYTVVPAEN  143 (350)
T ss_pred             CCCCCCCCCCEEEEecCcCCCCcccccc-----ccc------cCCCCC-------------------ccceEEEEecHHH
Confidence            9999999999999988888888776531     110      121122                   3899999999999


Q ss_pred             eEECCCCCCcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh
Q 017457          149 VVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF  227 (371)
Q Consensus       149 ~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l  227 (371)
                      ++++|+++++.+++.+++++.|||+++ ...++++|++|||+|+ |++|++++++|+++|+ +|++++++. +++.++++
T Consensus       144 ~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~vi~~~~~~-~~~~~~~~  220 (350)
T cd08274         144 AYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAVAGAA-KEEAVRAL  220 (350)
T ss_pred             ceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCch-hhHHHHhc
Confidence            999999999999999999999999976 7788999999999998 9999999999999999 788888665 88888999


Q ss_pred             CcceEEcCCCCCCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-Cc
Q 017457          228 GITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GR  305 (371)
Q Consensus       228 ga~~v~~~~~~~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~  305 (371)
                      |++.+++..+   ..+.+  ...+.+ ++|++||++++.. ++.++++++++ |+++.+|.. ......++...++. +.
T Consensus       221 g~~~~~~~~~---~~~~~--~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-G~~v~~g~~-~~~~~~~~~~~~~~~~~  292 (350)
T cd08274         221 GADTVILRDA---PLLAD--AKALGGEPVDVVADVVGGPL-FPDLLRLLRPG-GRYVTAGAI-AGPVVELDLRTLYLKDL  292 (350)
T ss_pred             CCeEEEeCCC---ccHHH--HHhhCCCCCcEEEecCCHHH-HHHHHHHhccC-CEEEEeccc-CCccccCCHHHhhhcce
Confidence            9986666544   33333  455555 8999999999865 89999999998 999999864 22224555555444 88


Q ss_pred             eEEEeeccCCCchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEE
Q 017457          306 SVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW  366 (371)
Q Consensus       306 ~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~  366 (371)
                      ++.++....   ...+.++++++.++++..  ++++.|+++++++|++.+.++... |+++.
T Consensus       293 ~~~~~~~~~---~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~  349 (350)
T cd08274         293 TLFGSTLGT---REVFRRLVRYIEEGEIRP--VVAKTFPLSEIREAQAEFLEKRHVGKLVLV  349 (350)
T ss_pred             EEEEeecCC---HHHHHHHHHHHHCCCccc--ccccccCHHHHHHHHHHHhcCCCceEEEEe
Confidence            888876432   467889999999997653  356889999999999999876655 88875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=7.4e-37  Score=285.87  Aligned_cols=293  Identities=20%  Similarity=0.225  Sum_probs=235.3

Q ss_pred             CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCC
Q 017457            7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHR   86 (371)
Q Consensus         7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~   86 (371)
                      ..+++++.|.|+|+++||+|||++++||+.|......   ..  .+|.++|+|++|+|++   .++.|++||+|...   
T Consensus        19 ~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~---~~--~~p~v~G~e~~G~V~~---~~~~~~~Gd~V~~~---   87 (329)
T cd08294          19 SDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR---LN--EGDTMIGTQVAKVIES---KNSKFPVGTIVVAS---   87 (329)
T ss_pred             cceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc---CC--CCCcEecceEEEEEec---CCCCCCCCCEEEee---
Confidence            4589999999999999999999999999876542211   11  4678999999999985   44679999999542   


Q ss_pred             CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecc---eeEECCCCCC--c---
Q 017457           87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT---HVVKITPHIP--L---  158 (371)
Q Consensus        87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~---~~~~~P~~l~--~---  158 (371)
                                                                       ++|++|+.++.+   .++++|++++  +   
T Consensus        88 -------------------------------------------------~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~  118 (329)
T cd08294          88 -------------------------------------------------FGWRTHTVSDGKDQPDLYKLPADLPDDLPPS  118 (329)
T ss_pred             -------------------------------------------------CCeeeEEEECCccccceEECCccccccCChH
Confidence                                                             268899999999   9999999998  2   


Q ss_pred             chhhccccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCC
Q 017457          159 GIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPAT  237 (371)
Q Consensus       159 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~  237 (371)
                      ..+++++++++|||+++.+..++++|++|||+|+ |++|++++|+|+++|+ +|+++++++++.+.++++|+++++++++
T Consensus       119 ~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~~l~~~Ga~~vi~~~~  197 (329)
T cd08294         119 LALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVAWLKELGFDAVFNYKT  197 (329)
T ss_pred             HHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCC
Confidence            2334678899999998878889999999999996 9999999999999999 8999999999999999999999999887


Q ss_pred             CCCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCC---c--eecCHHH-HhcCceEEEee
Q 017457          238 CGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGS---P--ISLNSIE-ILKGRSVCGTY  311 (371)
Q Consensus       238 ~~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~---~--~~~~~~~-~~~~~~~~g~~  311 (371)
                         .++.+.+++++++++|++||++|+.. +..++++++++ |+++.+|......   .  ....... ++.++++.++.
T Consensus       198 ---~~~~~~v~~~~~~gvd~vld~~g~~~-~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  272 (329)
T cd08294         198 ---VSLEEALKEAAPDGIDCYFDNVGGEF-SSTVLSHMNDF-GRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFI  272 (329)
T ss_pred             ---ccHHHHHHHHCCCCcEEEEECCCHHH-HHHHHHhhccC-CEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEE
Confidence               78888888887678999999999865 89999999998 9999998532111   1  0112222 33478888875


Q ss_pred             ccCCC--chhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEe
Q 017457          312 FGGLK--PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM  367 (371)
Q Consensus       312 ~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~  367 (371)
                      ...+.  ..+.+++++++++++++.+.  ....|+++++++|++.+.+++.. |+++++
T Consensus       273 ~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~  329 (329)
T cd08294         273 VYRWQDRWPEALKQLLKWIKEGKLKYR--EHVTEGFENMPQAFIGMLKGENTGKAIVKV  329 (329)
T ss_pred             hhhhHHHHHHHHHHHHHHHHCCCCcCC--cccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            44321  12346788999999987765  23568999999999999887765 888863

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.2e-36  Score=278.80  Aligned_cols=290  Identities=27%  Similarity=0.451  Sum_probs=244.5

Q ss_pred             CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccC-
Q 017457            7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH-   85 (371)
Q Consensus         7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~-   85 (371)
                      .++++++++.|++.+++|+|||.++++|++|.+...|.+...  ..|.++|+|++|+|+++|++++.|++||+|++.+. 
T Consensus        12 ~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~--~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~   89 (306)
T cd08258          12 GNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPV--ETPVVLGHEFSGTIVEVGPDVEGWKVGDRVVSETTF   89 (306)
T ss_pred             CceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcC--CCCeeeccceEEEEEEECCCcCcCCCCCEEEEccCc
Confidence            358999999999999999999999999999998888875333  45789999999999999999999999999998875 


Q ss_pred             CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccc
Q 017457           86 RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLS  165 (371)
Q Consensus        86 ~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~  165 (371)
                      ..|+.|++|..+..+.|...+.   .|....                   |+|++|+.++.++++++|+++++++++ +.
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~  146 (306)
T cd08258          90 STCGRCPYCRRGDYNLCPHRKG---IGTQAD-------------------GGFAEYVLVPEESLHELPENLSLEAAA-LT  146 (306)
T ss_pred             CCCCCCcchhCcCcccCCCCce---eeecCC-------------------CceEEEEEcchHHeEECcCCCCHHHHH-hh
Confidence            6799999999999999976431   333233                   499999999999999999999999887 66


Q ss_pred             cchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEc--CChhHHHHHHHhCcceEEcCCCCCCccH
Q 017457          166 CGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVD--INPEKFEIGKKFGITDFINPATCGDKTV  243 (371)
Q Consensus       166 ~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~--~~~~~~~~~~~lga~~v~~~~~~~~~~~  243 (371)
                      ..+++||+++....+++++++|||.|+|.+|++++++|+++|+ +|+++.  +++++.+.++++|++++ +++.   .++
T Consensus       147 ~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~-~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~---~~~  221 (306)
T cd08258         147 EPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA-TVVVVGTEKDEVRLDVAKELGADAV-NGGE---EDL  221 (306)
T ss_pred             chHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHhCCccc-CCCc---CCH
Confidence            6888999988888889999999998779999999999999999 787763  34567788889999888 7766   788


Q ss_pred             HHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhhH
Q 017457          244 SQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDI  321 (371)
Q Consensus       244 ~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~  321 (371)
                      .+.+.+++++ ++|++||++|+...+...+++++++ |+++.+|... .....++...++. ++++.|+.++.   ++++
T Consensus       222 ~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~  296 (306)
T cd08258         222 AELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVGIFG-PLAASIDVERIIQKELSVIGSRSST---PASW  296 (306)
T ss_pred             HHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccC-CCCcccCHHHHhhcCcEEEEEecCc---hHhH
Confidence            8888888776 8999999998766688999999998 9999999854 2335556566554 89999987654   5689


Q ss_pred             HHHHHHHHcC
Q 017457          322 ATLAQKYLDK  331 (371)
Q Consensus       322 ~~~~~~~~~g  331 (371)
                      +++++++++|
T Consensus       297 ~~~~~~~~~~  306 (306)
T cd08258         297 ETALRLLASG  306 (306)
T ss_pred             HHHHHHHhcC
Confidence            9999998875

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=4.7e-36  Score=281.33  Aligned_cols=300  Identities=17%  Similarity=0.195  Sum_probs=239.6

Q ss_pred             CCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccC
Q 017457            6 GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH   85 (371)
Q Consensus         6 ~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~   85 (371)
                      ...+++.++|.|+|+++||+|||+++++|+.|..++.|..+..  .+|.++|+|++|+|+++|++++.|++||+|+....
T Consensus        14 ~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~   91 (336)
T TIGR02817        14 PDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEA--GQPKILGWDAAGVVVAVGDEVTLFKPGDEVWYAGD   91 (336)
T ss_pred             cccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCC--CCCcccceeeEEEEEEeCCCCCCCCCCCEEEEcCC
Confidence            3458888999999999999999999999999998888765433  56889999999999999999999999999965310


Q ss_pred             CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccc
Q 017457           86 RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLS  165 (371)
Q Consensus        86 ~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~  165 (371)
                                                 ....                   |+|++|+.++++.++++|+++++++++.++
T Consensus        92 ---------------------------~~~~-------------------g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~  125 (336)
T TIGR02817        92 ---------------------------IDRP-------------------GSNAEFHLVDERIVGHKPKSLSFAEAAALP  125 (336)
T ss_pred             ---------------------------CCCC-------------------CcccceEEEcHHHcccCCCCCCHHHHhhhh
Confidence                                       0112                   489999999999999999999999999999


Q ss_pred             cchhhhHHHHHHHcCCCC-----CCeEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHHhCcceEEcCCCC
Q 017457          166 CGVSTGVGAAWKVAGVEV-----GSTVAIFGL-GAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKFGITDFINPATC  238 (371)
Q Consensus       166 ~~~~ta~~~l~~~~~~~~-----g~~VLI~G~-g~~G~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~  238 (371)
                      +++.|||+++....++++     |++|||+|+ |++|++++|+|+++ |+ +|+++++++++.+.++++|+++++++.. 
T Consensus       126 ~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~g~~~~~~~~~-  203 (336)
T TIGR02817       126 LTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLELGAHHVIDHSK-  203 (336)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHcCCCEEEECCC-
Confidence            999999998877788877     999999997 99999999999998 99 8999999999999999999999998544 


Q ss_pred             CCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccC--C
Q 017457          239 GDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGG--L  315 (371)
Q Consensus       239 ~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~--~  315 (371)
                         ++.+.+.+..++++|+++|++++.......+++++++ |+++.++..     ..++...+.. +.++.+..+..  .
T Consensus       204 ---~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-G~~v~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~  274 (336)
T TIGR02817       204 ---PLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQ-GRFALIDDP-----AELDISPFKRKSISLHWEFMFTRSM  274 (336)
T ss_pred             ---CHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccC-CEEEEEccc-----ccccchhhhhcceEEEEEEeecccc
Confidence               5777777754448999999987666689999999998 999988531     1233333333 35555433221  1


Q ss_pred             Cc-------hhhHHHHHHHHHcCCCCCCCceeEEE---ecccHHHHHHHHhcCcee-eEEEE
Q 017457          316 KP-------RSDIATLAQKYLDKELNLGEFITHEV---SFHDINKAFDLLLEGKSL-RCIIW  366 (371)
Q Consensus       316 ~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~a~~~~~~~~~~-kvvv~  366 (371)
                      ..       ...++++++++.++.+...  +.+.+   +++++++|++.+.+++.. |+++.
T Consensus       275 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  334 (336)
T TIGR02817       275 FQTADMIEQHHLLNRVARLVDAGKIRTT--LAETFGTINAANLKRAHALIESGKARGKIVLE  334 (336)
T ss_pred             cchhhhhhhHHHHHHHHHHHHCCCeecc--chhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence            00       1346789999999976533  33444   478999999999887665 77764

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.7e-35  Score=274.52  Aligned_cols=302  Identities=21%  Similarity=0.330  Sum_probs=244.3

Q ss_pred             CCCcEEEEEecCCCCCCeEEEEEeEeeccccccccc-ccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeecc
Q 017457            6 GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFW-KSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIF   84 (371)
Q Consensus         6 ~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~-~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~   84 (371)
                      .+.+++++++.|++.++||+||+.++++|+.|+..+ .|......+.+|.++|+|++|+|+++|+.++++++||+|+...
T Consensus         4 ~~~~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~   83 (312)
T cd08269           4 PGRFEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLS   83 (312)
T ss_pred             CCeeEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEec
Confidence            346999999999999999999999999999999887 6654322114578999999999999999999999999997642


Q ss_pred             CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcc
Q 017457           85 HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLL  164 (371)
Q Consensus        85 ~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~  164 (371)
                      .                                                  |+|++|+.+++++++++|+++  ..++.+
T Consensus        84 ~--------------------------------------------------g~~~~~~~v~~~~~~~lP~~~--~~~~~~  111 (312)
T cd08269          84 G--------------------------------------------------GAFAEYDLADADHAVPLPSLL--DGQAFP  111 (312)
T ss_pred             C--------------------------------------------------CcceeeEEEchhheEECCCch--hhhHHh
Confidence            1                                                  389999999999999999998  233322


Q ss_pred             ccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHH
Q 017457          165 SCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVS  244 (371)
Q Consensus       165 ~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~  244 (371)
                      ..++++|++++. ..+++++++|||+|+|.+|.+++++|+++|+++|+++.+++++.+.++++|++++++.+.   .++.
T Consensus       112 ~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~  187 (312)
T cd08269         112 GEPLGCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDS---EAIV  187 (312)
T ss_pred             hhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCC---cCHH
Confidence            367888988764 788999999999988999999999999999933999999999999999999998988766   6788


Q ss_pred             HHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHH-hcCceEEEeeccCCC-chhhH
Q 017457          245 QVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFGGLK-PRSDI  321 (371)
Q Consensus       245 ~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~-~~~~~  321 (371)
                      +.+.+++++ ++|+++|++|+.......+++++++ |+++.+|... .....++...+ +.+.++.++...... ..+.+
T Consensus       188 ~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-g~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (312)
T cd08269         188 ERVRELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQ-DGPRPVPFQTWNWKGIDLINAVERDPRIGLEGM  265 (312)
T ss_pred             HHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCC-CCCcccCHHHHhhcCCEEEEecccCccchhhHH
Confidence            888888877 9999999998776689999999998 9999998643 22334443333 336777766433321 23578


Q ss_pred             HHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCce--eeEEE
Q 017457          322 ATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS--LRCII  365 (371)
Q Consensus       322 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~--~kvvv  365 (371)
                      ++++++++++.+.+..++.+.|+++++++|++.+.++..  .|+++
T Consensus       266 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~  311 (312)
T cd08269         266 REAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI  311 (312)
T ss_pred             HHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence            899999999987765445688999999999999988754  48776

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=100.00  E-value=1e-35  Score=277.36  Aligned_cols=299  Identities=22%  Similarity=0.275  Sum_probs=252.5

Q ss_pred             CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457            8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD   87 (371)
Q Consensus         8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~   87 (371)
                      .+++++.|.|++.+++|+||+.++++|+.|...+.|...... .+|.++|+|++|+|+++|++++++++||+|++.+.  
T Consensus        13 ~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~-~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~--   89 (323)
T cd05282          13 VLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRP-PLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG--   89 (323)
T ss_pred             eEEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCC-CCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC--
Confidence            466778888889999999999999999999998877654322 56789999999999999999999999999976431  


Q ss_pred             CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccc
Q 017457           88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG  167 (371)
Q Consensus        88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~  167 (371)
                                                  .                   |+|++|+.++.+.++++|+++++.+++.+++.
T Consensus        90 ----------------------------~-------------------g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~  122 (323)
T cd05282          90 ----------------------------E-------------------GTWQEYVVAPADDLIPVPDSISDEQAAMLYIN  122 (323)
T ss_pred             ----------------------------C-------------------CcceeEEecCHHHeEECCCCCCHHHHHHHhcc
Confidence                                        1                   38999999999999999999999999999999


Q ss_pred             hhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHH
Q 017457          168 VSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV  246 (371)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~  246 (371)
                      +.+||+++.....+.+|++|||+|+ |.+|++++++|+++|+ +++++.+++++++.++++|++++++++.   .++.+.
T Consensus       123 ~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~  198 (323)
T cd05282         123 PLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSP---EDLAQR  198 (323)
T ss_pred             HHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccc---hhHHHH
Confidence            9999998877778899999999988 9999999999999999 8999998999999999999999998876   678888


Q ss_pred             HHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHh-cCceEEEeeccCCCc-------
Q 017457          247 IKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGGLKP-------  317 (371)
Q Consensus       247 i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~-------  317 (371)
                      +.+++++ ++|++|||+++.. ....+++++++ |+++.+|..... ...++...+. ++.++.+..+..+..       
T Consensus       199 ~~~~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (323)
T cd05282         199 VKEATGGAGARLALDAVGGES-ATRLARSLRPG-GTLVNYGLLSGE-PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAK  275 (323)
T ss_pred             HHHHhcCCCceEEEECCCCHH-HHHHHHhhCCC-CEEEEEccCCCC-CCCCCHHHHhhcCceEEEEEehHhhccCCHHHH
Confidence            8888887 9999999999877 77889999998 999999864332 3455666666 588888876554321       


Q ss_pred             hhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEE
Q 017457          318 RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII  365 (371)
Q Consensus       318 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv  365 (371)
                      .+.+.++++++.++++.+.  .++.|+++++++|++.+.++... |+++
T Consensus       276 ~~~~~~~~~~l~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~  322 (323)
T cd05282         276 QETFAEVIKLVEAGVLTTP--VGAKFPLEDFEEAVAAAEQPGRGGKVLL  322 (323)
T ss_pred             HHHHHHHHHHHhCCCcccC--ccceecHHHHHHHHHHHhcCCCCceEee
Confidence            1346778899999977643  56889999999999999887655 7775

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=8.3e-35  Score=272.51  Aligned_cols=320  Identities=23%  Similarity=0.308  Sum_probs=260.1

Q ss_pred             CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCC
Q 017457            7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHR   86 (371)
Q Consensus         7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~   86 (371)
                      ..+++++.+.|.++++||+|++.++++|++|++...|.++... ..|.++|||++|+|+++|+.+.++++||+|++....
T Consensus        13 ~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~-~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~   91 (336)
T cd08276          13 DNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPV-KDPLIPLSDGAGEVVAVGEGVTRFKVGDRVVPTFFP   91 (336)
T ss_pred             cceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCC-CCCcccccceeEEEEEeCCCCcCCCCCCEEEEeccc
Confidence            4577888888889999999999999999999998888764332 468889999999999999999999999999987766


Q ss_pred             CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcccc
Q 017457           87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC  166 (371)
Q Consensus        87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~  166 (371)
                      .|+.|.+|      +|.....   .|...+                   |+|++|+.++.+.++++|+++++.+++.+++
T Consensus        92 ~~~~~~~~------~~~~~~~---~~~~~~-------------------g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~  143 (336)
T cd08276          92 NWLDGPPT------AEDEASA---LGGPID-------------------GVLAEYVVLPEEGLVRAPDHLSFEEAATLPC  143 (336)
T ss_pred             cccccccc------ccccccc---cccccC-------------------ceeeeEEEecHHHeEECCCCCCHHHhhhhhH
Confidence            66554443      3332211   232223                   3899999999999999999999999999999


Q ss_pred             chhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHH
Q 017457          167 GVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV  246 (371)
Q Consensus       167 ~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~  246 (371)
                      .+.+||+++.....+++|++|+|+|+|++|++++++|+++|+ +|+++++++++++.+.++|++++++.+.  +.++.+.
T Consensus       144 ~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~  220 (336)
T cd08276         144 AGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINYRT--TPDWGEE  220 (336)
T ss_pred             HHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcCCc--ccCHHHH
Confidence            999999988777889999999999889999999999999999 8999999999999998899999887653  1467778


Q ss_pred             HHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHH-hcCceEEEeeccCCCchhhHHHH
Q 017457          247 IKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFGGLKPRSDIATL  324 (371)
Q Consensus       247 i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~  324 (371)
                      +.+++++ ++|+++|+++... ...++++++++ |+++.+|..... ........+ .++.++.+.....   ...++++
T Consensus       221 ~~~~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~  294 (336)
T cd08276         221 VLKLTGGRGVDHVVEVGGPGT-LAQSIKAVAPG-GVISLIGFLSGF-EAPVLLLPLLTKGATLRGIAVGS---RAQFEAM  294 (336)
T ss_pred             HHHHcCCCCCcEEEECCChHH-HHHHHHhhcCC-CEEEEEccCCCC-ccCcCHHHHhhcceEEEEEecCc---HHHHHHH
Confidence            8888887 9999999998665 88999999998 999999864332 222333343 4488888876543   4578889


Q ss_pred             HHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEE
Q 017457          325 AQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW  366 (371)
Q Consensus       325 ~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~  366 (371)
                      +++++++.+...  .++.+++++++++++.+.+++.. |++++
T Consensus       295 ~~l~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  335 (336)
T cd08276         295 NRAIEAHRIRPV--IDRVFPFEEAKEAYRYLESGSHFGKVVIR  335 (336)
T ss_pred             HHHHHcCCcccc--cCcEEeHHHHHHHHHHHHhCCCCceEEEe
Confidence            999988866543  45889999999999999887665 88775

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=100.00  E-value=6e-35  Score=272.25  Aligned_cols=302  Identities=17%  Similarity=0.204  Sum_probs=248.2

Q ss_pred             CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCC-CCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCC
Q 017457            8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-PKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHR   86 (371)
Q Consensus         8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~   86 (371)
                      .+++.+.+.|.+.++||+|++.++++|++|++...|..+. .....|.++|||++|+|+++|+.++.+++||+|++... 
T Consensus        14 ~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~-   92 (324)
T cd08244          14 VLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDPAWLGRRVVAHTG-   92 (324)
T ss_pred             ceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCCCCCCCEEEEccC-
Confidence            4666677777789999999999999999999888876432 11256788999999999999999999999999976421 


Q ss_pred             CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcccc
Q 017457           87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC  166 (371)
Q Consensus        87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~  166 (371)
                                                 ...                   |+|++|+.++.++++++|+++++.+++.+++
T Consensus        93 ---------------------------~~~-------------------g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~  126 (324)
T cd08244          93 ---------------------------RAG-------------------GGYAELAVADVDSLHPVPDGLDLEAAVAVVH  126 (324)
T ss_pred             ---------------------------CCC-------------------ceeeEEEEEchHHeEeCCCCCCHHHHhhhcc
Confidence                                       011                   4899999999999999999999999999999


Q ss_pred             chhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHH
Q 017457          167 GVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQ  245 (371)
Q Consensus       167 ~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~  245 (371)
                      .+.||| ++.....++++++|+|+|+ |++|++++++|+++|+ +|+++++++++.+.++++|+++++++.+   .++.+
T Consensus       127 ~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~  201 (324)
T cd08244         127 DGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVAVDYTR---PDWPD  201 (324)
T ss_pred             hHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEecCC---ccHHH
Confidence            999995 4677788999999999996 9999999999999999 8999999999999999999988888776   67888


Q ss_pred             HHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCc---hhh
Q 017457          246 VIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKP---RSD  320 (371)
Q Consensus       246 ~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~---~~~  320 (371)
                      .+.+++++ ++|+++|++|+.. ...++++++++ |+++.+|..... ...++...++. +.++.+........   .+.
T Consensus       202 ~~~~~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (324)
T cd08244         202 QVREALGGGGVTVVLDGVGGAI-GRAALALLAPG-GRFLTYGWASGE-WTALDEDDARRRGVTVVGLLGVQAERGGLRAL  278 (324)
T ss_pred             HHHHHcCCCCceEEEECCChHh-HHHHHHHhccC-cEEEEEecCCCC-CCccCHHHHhhCCcEEEEeecccCCHHHHHHH
Confidence            88888777 8999999999887 79999999998 999999874322 22444333334 78888876543321   245


Q ss_pred             HHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEE
Q 017457          321 IATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW  366 (371)
Q Consensus       321 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~  366 (371)
                      +++++++++++.+..  ++++.|+++++++|++.+.++... |+++.
T Consensus       279 ~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  323 (324)
T cd08244         279 EARALAEAAAGRLVP--VVGQTFPLERAAEAHAALEARSTVGKVLLL  323 (324)
T ss_pred             HHHHHHHHHCCCccC--ccceEEeHHHHHHHHHHHHcCCCCceEEEe
Confidence            777889999987653  366899999999999999887665 88875

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=100.00  E-value=2.4e-35  Score=277.12  Aligned_cols=305  Identities=22%  Similarity=0.290  Sum_probs=246.7

Q ss_pred             cEEEEEecCCCCC-CeEEEEEeEeecccccccccccCCCCCCC---CCCccccccccEEEEEeCCCCCCcCCCCEEeecc
Q 017457            9 LVIEEIEVEPPKA-WEIRIKILCTSLCHSDVTFWKSSTDLPKL---PLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIF   84 (371)
Q Consensus         9 l~~~~~~~~~~~~-~eVlVkv~~~~i~~~D~~~~~g~~~~~~~---~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~   84 (371)
                      +.+++.|.|+|.+ ++|+||+.++++|+.|.....|..+....   .+|.++|||++|+|+++|+++..|++||+|++..
T Consensus        16 ~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~   95 (341)
T cd08290          16 LQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGSGVKSLKPGDWVIPLR   95 (341)
T ss_pred             eEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCCCCCCCCCCCEEEecC
Confidence            7888999998887 99999999999999999998887543210   1677899999999999999999999999996642


Q ss_pred             CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcc
Q 017457           85 HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLL  164 (371)
Q Consensus        85 ~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~  164 (371)
                      .                             ..                   |+|++|+.++.+.++++|+++++++++.+
T Consensus        96 ~-----------------------------~~-------------------g~~~~~~~v~~~~~~~lp~~~~~~~aa~~  127 (341)
T cd08290          96 P-----------------------------GL-------------------GTWRTHAVVPADDLIKVPNDVDPEQAATL  127 (341)
T ss_pred             C-----------------------------CC-------------------ccchheEeccHHHeEeCCCCCCHHHHHHh
Confidence            1                             01                   48999999999999999999999999999


Q ss_pred             ccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh----hHHHHHHHhCcceEEcCCCCC
Q 017457          165 SCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP----EKFEIGKKFGITDFINPATCG  239 (371)
Q Consensus       165 ~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~----~~~~~~~~lga~~v~~~~~~~  239 (371)
                      ++.+.|||+++.....+++|++|||+|+ |++|++++++|+++|+ +++++.+++    ++.+.++++|++++++++...
T Consensus       128 ~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  206 (341)
T cd08290         128 SVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERLKALGADHVLTEEELR  206 (341)
T ss_pred             hccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-eEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccc
Confidence            9999999998877788999999999987 9999999999999999 788887665    678888889999999876610


Q ss_pred             CccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHH-HhcCceEEEeeccCCC--
Q 017457          240 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGTYFGGLK--  316 (371)
Q Consensus       240 ~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~--  316 (371)
                      ..++.+.+..++++++|++|||+|+.. ....+++++++ |+++.+|.... ....++... +.++.++.+.......  
T Consensus       207 ~~~~~~~i~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (341)
T cd08290         207 SLLATELLKSAPGGRPKLALNCVGGKS-ATELARLLSPG-GTMVTYGGMSG-QPVTVPTSLLIFKDITLRGFWLTRWLKR  283 (341)
T ss_pred             cccHHHHHHHHcCCCceEEEECcCcHh-HHHHHHHhCCC-CEEEEEeccCC-CCcccCHHHHhhCCceEEEEecHHHHhh
Confidence            116777787776658999999999876 77899999998 99999985322 223444433 3448888887654321  


Q ss_pred             --c---hhhHHHHHHHHHcCCCCCCCceeEEE---ecccHHHHHHHHhcCcee-eEEEEe
Q 017457          317 --P---RSDIATLAQKYLDKELNLGEFITHEV---SFHDINKAFDLLLEGKSL-RCIIWM  367 (371)
Q Consensus       317 --~---~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~a~~~~~~~~~~-kvvv~~  367 (371)
                        .   ...+..+++++.++.+.+.  ....+   +++++++|++.+.+++.. |+++.+
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~  341 (341)
T cd08290         284 ANPEEKEDMLEELAELIREGKLKAP--PVEKVTDDPLEEFKDALANALKGGGGGKQVLVM  341 (341)
T ss_pred             cCHHHHHHHHHHHHHHHHcCCccCC--cccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence              0   1247788899999977654  33556   999999999999887665 888764

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=100.00  E-value=2.7e-35  Score=275.15  Aligned_cols=303  Identities=18%  Similarity=0.191  Sum_probs=245.3

Q ss_pred             CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCC
Q 017457            7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHR   86 (371)
Q Consensus         7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~   86 (371)
                      ..+++++++.|+|.++||+||+.++++|++|+....|.++..  .+|.++|||++|+|+.+|++++.+++||+|+.... 
T Consensus        14 ~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~--~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~-   90 (327)
T PRK10754         14 EVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPP--SLPSGLGTEAAGVVSKVGSGVKHIKVGDRVVYAQS-   90 (327)
T ss_pred             hHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCC--CCCCccCcceEEEEEEeCCCCCCCCCCCEEEECCC-
Confidence            358888999999999999999999999999999888876544  56788999999999999999999999999964211 


Q ss_pred             CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcccc
Q 017457           87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC  166 (371)
Q Consensus        87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~  166 (371)
                                                  ..                   |+|++|+.++.+.++++|+++++++++.+++
T Consensus        91 ----------------------------~~-------------------g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~  123 (327)
T PRK10754         91 ----------------------------AL-------------------GAYSSVHNVPADKAAILPDAISFEQAAASFL  123 (327)
T ss_pred             ----------------------------CC-------------------cceeeEEEcCHHHceeCCCCCCHHHHHHHHH
Confidence                                        01                   3899999999999999999999999999888


Q ss_pred             chhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHH
Q 017457          167 GVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQ  245 (371)
Q Consensus       167 ~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~  245 (371)
                      .+.+|++++.....+++|++|+|+|+ |.+|++++++|+++|+ +|+++++++++++.++++|++++++.+.   .++.+
T Consensus       124 ~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~  199 (327)
T PRK10754        124 KGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVINYRE---ENIVE  199 (327)
T ss_pred             HHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEcCCC---CcHHH
Confidence            99999998777788999999999976 9999999999999999 8999999999999999999999998776   77888


Q ss_pred             HHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceE-EEeec-cCCCch---
Q 017457          246 VIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSV-CGTYF-GGLKPR---  318 (371)
Q Consensus       246 ~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~-~g~~~-~~~~~~---  318 (371)
                      .+++++++ ++|++|||+++.. ....+++++++ |+++.+|.... ....++...+.. +..+ ..... ......   
T Consensus       200 ~~~~~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (327)
T PRK10754        200 RVKEITGGKKVRVVYDSVGKDT-WEASLDCLQRR-GLMVSFGNASG-PVTGVNLGILNQKGSLYVTRPSLQGYITTREEL  276 (327)
T ss_pred             HHHHHcCCCCeEEEEECCcHHH-HHHHHHHhccC-CEEEEEccCCC-CCCCcCHHHHhccCceEEecceeecccCCHHHH
Confidence            89998887 8999999999865 88899999998 99999986432 112233332222 1111 11100 111111   


Q ss_pred             -hhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEE
Q 017457          319 -SDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW  366 (371)
Q Consensus       319 -~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~  366 (371)
                       +.+..++++++++++.+.....+.|++++++++++.+.+++.. |+++.
T Consensus       277 ~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~  326 (327)
T PRK10754        277 TEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLI  326 (327)
T ss_pred             HHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence             2345688999999887655456899999999999999887655 88875

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=100.00  E-value=5.9e-35  Score=273.10  Aligned_cols=301  Identities=24%  Similarity=0.273  Sum_probs=245.7

Q ss_pred             CCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccC
Q 017457            6 GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH   85 (371)
Q Consensus         6 ~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~   85 (371)
                      ...+++++.+.|.|.++||+|||.++++|+.|++...|.+.... .+|.++|+|++|+|+.+|+.++++++||+|++...
T Consensus        15 ~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~-~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~   93 (329)
T cd08250          15 REATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGV-KPPFDCGFEGVGEVVAVGEGVTDFKVGDAVATMSF   93 (329)
T ss_pred             ccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCC-CCCcccCceeEEEEEEECCCCCCCCCCCEEEEecC
Confidence            45688999999999999999999999999999998888764321 67889999999999999999999999999966321


Q ss_pred             CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccc
Q 017457           86 RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLS  165 (371)
Q Consensus        86 ~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~  165 (371)
                                                                        |+|++|+.++.+.++++|++  +.+++.++
T Consensus        94 --------------------------------------------------g~~~s~~~v~~~~~~~ip~~--~~~~a~l~  121 (329)
T cd08250          94 --------------------------------------------------GAFAEYQVVPARHAVPVPEL--KPEVLPLL  121 (329)
T ss_pred             --------------------------------------------------cceeEEEEechHHeEECCCC--cchhhhcc
Confidence                                                              48999999999999999997  35677888


Q ss_pred             cchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHH
Q 017457          166 CGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVS  244 (371)
Q Consensus       166 ~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~  244 (371)
                      +++.|||+++.....++++++|+|+|+ |.+|++++++|++.|+ +|+++.+++++.+.++++|++.+++.++   .++.
T Consensus       122 ~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~---~~~~  197 (329)
T cd08250         122 VSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDRPINYKT---EDLG  197 (329)
T ss_pred             cHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCceEEeCCC---ccHH
Confidence            899999998877788999999999996 9999999999999999 8999999999999999999988888766   5676


Q ss_pred             HHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCC---------CceecCHHHHhcCceEEEeeccCC
Q 017457          245 QVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG---------SPISLNSIEILKGRSVCGTYFGGL  315 (371)
Q Consensus       245 ~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~---------~~~~~~~~~~~~~~~~~g~~~~~~  315 (371)
                      +.+....++++|++||++|+.. +..++++++++ |+++.+|.....         ....++...+..+.++.++.+..+
T Consensus       198 ~~~~~~~~~~vd~v~~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (329)
T cd08250         198 EVLKKEYPKGVDVVYESVGGEM-FDTCVDNLALK-GRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHY  275 (329)
T ss_pred             HHHHHhcCCCCeEEEECCcHHH-HHHHHHHhccC-CeEEEEecccCCcccCcccccccccccHHHhhcCceEEEEEhHHH
Confidence            7776665558999999999755 89999999998 999999864321         111233333445888888764432


Q ss_pred             C--chhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEE
Q 017457          316 K--PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII  365 (371)
Q Consensus       316 ~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv  365 (371)
                      .  ..+.+.+++++++++.+.+.....+.++++++++|++.+.+++.. |+++
T Consensus       276 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv  328 (329)
T cd08250         276 AKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVV  328 (329)
T ss_pred             HHHHHHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceEEe
Confidence            1  134577888999999776543344679999999999999887665 7775

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=1.5e-35  Score=274.44  Aligned_cols=302  Identities=23%  Similarity=0.334  Sum_probs=227.7

Q ss_pred             cEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCC--CCCCccccccccEEEE---EeC-CCCCCcCCCCEEee
Q 017457            9 LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPK--LPLPVIFGHEAVGVVE---SVG-EYVEEVKERDLVLP   82 (371)
Q Consensus         9 l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~--~~~p~~~G~e~~G~Vv---~vG-~~v~~~~~Gd~V~~   82 (371)
                      ...++.++|.|+++|++|++.++++|+.|+.++.|.+....  ..+|.+++.++.|++.   ..| ..+..+..||.+..
T Consensus        20 ~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~   99 (347)
T KOG1198|consen   20 LFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVA   99 (347)
T ss_pred             EEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEee
Confidence            44567899999999999999999999999999999875541  1466555555555533   333 22233444444422


Q ss_pred             ccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhh
Q 017457           83 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC  162 (371)
Q Consensus        83 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa  162 (371)
                                                                       +...|+|+||+++|+..++++|++++++++|
T Consensus       100 -------------------------------------------------~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa  130 (347)
T KOG1198|consen  100 -------------------------------------------------FLSSGGLAEYVVVPEKLLVKIPESLSFEEAA  130 (347)
T ss_pred             -------------------------------------------------ccCCCceeeEEEcchhhccCCCCccChhhhh
Confidence                                                             2233599999999999999999999999999


Q ss_pred             ccccchhhhHHHHHHHc------CCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcC
Q 017457          163 LLSCGVSTGVGAAWKVA------GVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP  235 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~~------~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~  235 (371)
                      +++.++.|||.++....      +.++|++|||+|+ |++|++++|+|++.|+ ..+++..++++.++++++|+++++|+
T Consensus       131 ~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy  209 (347)
T KOG1198|consen  131 ALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDY  209 (347)
T ss_pred             cCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecC
Confidence            99999999999998888      8999999999987 9999999999999996 55556668999999999999999999


Q ss_pred             CCCCCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHH----HHhc----CceE
Q 017457          236 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI----EILK----GRSV  307 (371)
Q Consensus       236 ~~~~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~----~~~~----~~~~  307 (371)
                      ++   +++.+.+++.++++||+||||+|+.. ......++... |+...++...+ ........    .+..    ...+
T Consensus       210 ~~---~~~~e~~kk~~~~~~DvVlD~vg~~~-~~~~~~~l~~~-g~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  283 (347)
T KOG1198|consen  210 KD---ENVVELIKKYTGKGVDVVLDCVGGST-LTKSLSCLLKG-GGGAYIGLVGD-ELANYKLDDLWQSANGIKLYSLGL  283 (347)
T ss_pred             CC---HHHHHHHHhhcCCCccEEEECCCCCc-cccchhhhccC-CceEEEEeccc-cccccccccchhhhhhhhheeeee
Confidence            99   99999999998449999999999986 77888888886 75444443211 11111100    0000    1111


Q ss_pred             EEe---eccCCCchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEeC
Q 017457          308 CGT---YFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMD  368 (371)
Q Consensus       308 ~g~---~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~~  368 (371)
                      .+.   +.......+.++.+.+++++++  +.+.+++.||++++.+||+.+.+++.. |+++.++
T Consensus       284 ~~~~~~~~~~~~~~~~l~~l~~~ie~gk--ikp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~  346 (347)
T KOG1198|consen  284 KGVNYRWLYFVPSAEYLKALVELIEKGK--IKPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKD  346 (347)
T ss_pred             eccceeeeeecCCHHHHHHHHHHHHcCc--ccCCcceeeeHHHHHHHHHHHhhcCCcceEEEEec
Confidence            111   1111123567888999999994  455588999999999999999886655 9999875

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-34  Score=270.48  Aligned_cols=303  Identities=21%  Similarity=0.277  Sum_probs=247.8

Q ss_pred             CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457            8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD   87 (371)
Q Consensus         8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~   87 (371)
                      .+.+.+.+.|++.++||+|||.++++|+.|.....|.++... ..|.++|+|++|+|+++|++++++++||+|+...   
T Consensus        15 ~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~-~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~---   90 (334)
T PTZ00354         15 VLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPP-GSSEILGLEVAGYVEDVGSDVKRFKEGDRVMALL---   90 (334)
T ss_pred             ceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCC-CCCcccceeeEEEEEEeCCCCCCCCCCCEEEEec---
Confidence            466777778889999999999999999999988887654321 4567899999999999999999999999995531   


Q ss_pred             CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccc
Q 017457           88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG  167 (371)
Q Consensus        88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~  167 (371)
                                                 .+                   |+|++|++++.++++++|+++++.+++.++++
T Consensus        91 ---------------------------~~-------------------g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~  124 (334)
T PTZ00354         91 ---------------------------PG-------------------GGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEA  124 (334)
T ss_pred             ---------------------------CC-------------------CceeeEEEecHHHcEeCCCCCCHHHHHHHHHH
Confidence                                       11                   38999999999999999999999999999999


Q ss_pred             hhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc-HHH
Q 017457          168 VSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT-VSQ  245 (371)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~-~~~  245 (371)
                      +.+||+++.....+++|++|||+|+ |++|++++++|+++|+ +++++.+++++.+.++++|++++++...   .+ +.+
T Consensus       125 ~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~  200 (334)
T PTZ00354        125 FLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAAIILIRYPD---EEGFAP  200 (334)
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecCC---hhHHHH
Confidence            9999998877788999999999997 9999999999999999 7777888999999999999998988765   44 778


Q ss_pred             HHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCcee-cCHHHHhc-CceEEEeeccCCCc-----
Q 017457          246 VIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS-LNSIEILK-GRSVCGTYFGGLKP-----  317 (371)
Q Consensus       246 ~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~-~~~~~~~~-~~~~~g~~~~~~~~-----  317 (371)
                      .+.+++++ ++|++||++++.. +..++++++++ |+++.++...+ .... ++...++. +.++.++.......     
T Consensus       201 ~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~-g~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (334)
T PTZ00354        201 KVKKLTGEKGVNLVLDCVGGSY-LSETAEVLAVD-GKWIVYGFMGG-AKVEKFNLLPLLRKRASIIFSTLRSRSDEYKAD  277 (334)
T ss_pred             HHHHHhCCCCceEEEECCchHH-HHHHHHHhccC-CeEEEEecCCC-CcccccCHHHHHhhCCEEEeeeccccchhhhHH
Confidence            88888876 9999999998765 89999999998 99999985332 2222 55555554 55888875443221     


Q ss_pred             --hhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEeCc
Q 017457          318 --RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDK  369 (371)
Q Consensus       318 --~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~~~  369 (371)
                        ...+++++++++++.+..  ++.+.+++++++++++.+.+++.. |+++.+.+
T Consensus       278 ~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~~  330 (334)
T PTZ00354        278 LVASFEREVLPYMEEGEIKP--IVDRTYPLEEVAEAHTFLEQNKNIGKVVLTVNE  330 (334)
T ss_pred             HHHHHHHHHHHHHHCCCccC--ccccEEcHHHHHHHHHHHHhCCCCceEEEecCC
Confidence              022467888888887654  356889999999999998876654 99987654

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=100.00  E-value=2.3e-34  Score=268.48  Aligned_cols=302  Identities=19%  Similarity=0.216  Sum_probs=235.3

Q ss_pred             CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457            8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD   87 (371)
Q Consensus         8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~   87 (371)
                      ++++++.|.|+|+++||+||+.++++|++|+....|.++... .+|.++|||++|+|+++  +++.+++||+|+....  
T Consensus        14 ~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~-~~~~~~g~e~~G~v~~~--~~~~~~~Gd~V~~~~~--   88 (325)
T cd05280          14 SLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTR-NYPHTPGIDAAGTVVSS--DDPRFREGDEVLVTGY--   88 (325)
T ss_pred             cceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCC-CCCCccCcccEEEEEEe--CCCCCCCCCEEEEccc--
Confidence            689999999999999999999999999999999988764322 46788999999999999  4567999999977431  


Q ss_pred             CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccc
Q 017457           88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG  167 (371)
Q Consensus        88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~  167 (371)
                                            ..|+..+                   |+|++|+.+++++++++|+++++.+++.+++.
T Consensus        89 ----------------------~~g~~~~-------------------g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~  127 (325)
T cd05280          89 ----------------------DLGMNTD-------------------GGFAEYVRVPADWVVPLPEGLSLREAMILGTA  127 (325)
T ss_pred             ----------------------ccCCCCC-------------------ceeEEEEEEchhhEEECCCCCCHHHHHhhHHH
Confidence                                  0222223                   38999999999999999999999999999999


Q ss_pred             hhhhHHHHHHHcC--CC-CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccH
Q 017457          168 VSTGVGAAWKVAG--VE-VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTV  243 (371)
Q Consensus       168 ~~ta~~~l~~~~~--~~-~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~  243 (371)
                      +.+|++++.....  +. .+++|||+|+ |.+|++++++|+++|+ +|+++++++++++.++++|++++++.+.   .  
T Consensus       128 ~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~--  201 (325)
T cd05280         128 GFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASEVLDRED---L--  201 (325)
T ss_pred             HHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEcchh---H--
Confidence            9999997755433  35 3579999998 9999999999999999 7999999999999999999999987654   2  


Q ss_pred             HHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHH-hcCceEEEeeccCCCc---h
Q 017457          244 SQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFGGLKP---R  318 (371)
Q Consensus       244 ~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~---~  318 (371)
                      ...+.+...+ ++|++||++++.. +..++++++++ |+++.+|..... ...++...+ .++.++.+........   .
T Consensus       202 ~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (325)
T cd05280         202 LDESKKPLLKARWAGAIDTVGGDV-LANLLKQTKYG-GVVASCGNAAGP-ELTTTVLPFILRGVSLLGIDSVNCPMELRK  278 (325)
T ss_pred             HHHHHHHhcCCCccEEEECCchHH-HHHHHHhhcCC-CEEEEEecCCCC-ccccccchheeeeeEEEEEEeecCchhHHH
Confidence            2233333333 8999999999865 99999999998 999999864322 223444444 3488888875443321   1


Q ss_pred             hhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEe
Q 017457          319 SDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM  367 (371)
Q Consensus       319 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~  367 (371)
                      ..++.+.+++.++..   ..+.+.|+++++++|++.+.+++.. |+++++
T Consensus       279 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  325 (325)
T cd05280         279 QVWQKLATEWKPDLL---EIVVREISLEELPEAIDRLLAGKHRGRTVVKI  325 (325)
T ss_pred             HHHHHHHHHHhcCCc---cceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence            223444455555522   2356999999999999999887765 888763

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=100.00  E-value=4e-34  Score=266.76  Aligned_cols=301  Identities=18%  Similarity=0.224  Sum_probs=237.1

Q ss_pred             CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457            8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD   87 (371)
Q Consensus         8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~   87 (371)
                      +++++++|.|.|.++||+||+.++++|++|+..+.|.++... ..|.++|||++|+|++  +++..|++||+|++...  
T Consensus        13 ~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~-~~~~~~g~e~~G~V~~--~~~~~~~~Gd~V~~~~~--   87 (323)
T TIGR02823        13 SAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVR-SYPMIPGIDAAGTVVS--SEDPRFREGDEVIVTGY--   87 (323)
T ss_pred             ceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCC-CCCccceeeeEEEEEe--cCCCCCCCCCEEEEccC--
Confidence            678999999999999999999999999999998888764321 5688899999999988  55678999999977532  


Q ss_pred             CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccc
Q 017457           88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG  167 (371)
Q Consensus        88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~  167 (371)
                                            ..|....                   |+|++|+.++.+.++++|+++++.+++.+++.
T Consensus        88 ----------------------~~~~~~~-------------------g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~  126 (323)
T TIGR02823        88 ----------------------GLGVSHD-------------------GGYSQYARVPADWLVPLPEGLSLREAMALGTA  126 (323)
T ss_pred             ----------------------CCCCCCC-------------------ccceEEEEEchhheEECCCCCCHHHhhhhhhh
Confidence                                  0222223                   48999999999999999999999999999999


Q ss_pred             hhhhHHHHHHH--cCCCCCC-eEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccH
Q 017457          168 VSTGVGAAWKV--AGVEVGS-TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTV  243 (371)
Q Consensus       168 ~~ta~~~l~~~--~~~~~g~-~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~  243 (371)
                      +.+|++++...  ..+.+++ +|||+|+ |.+|++++++|+++|+ +++++.+++++++.++++|++++++.++   .+.
T Consensus       127 ~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~---~~~  202 (323)
T TIGR02823       127 GFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEVIDRED---LSP  202 (323)
T ss_pred             HHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEEEcccc---HHH
Confidence            99998875433  3488898 9999998 9999999999999999 8888888888889999999998887654   222


Q ss_pred             HHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHH-hcCceEEEeeccCCCc---hh
Q 017457          244 SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFGGLKP---RS  319 (371)
Q Consensus       244 ~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~---~~  319 (371)
                        .++.++++++|+++|++|+.. +..++++++++ |+++.+|... .....++...+ .++.++.+........   ..
T Consensus       203 --~~~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (323)
T TIGR02823       203 --PGKPLEKERWAGAVDTVGGHT-LANVLAQLKYG-GAVAACGLAG-GPDLPTTVLPFILRGVSLLGIDSVYCPMALREA  277 (323)
T ss_pred             --HHHHhcCCCceEEEECccHHH-HHHHHHHhCCC-CEEEEEcccC-CCCccccHHHHhhcceEEEEEeccccCchhHHH
Confidence              445555557999999999876 89999999998 9999999742 22334444444 4488888865432211   12


Q ss_pred             hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEE
Q 017457          320 DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW  366 (371)
Q Consensus       320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~  366 (371)
                      .++.+.+++.++.+..  . .+.|+++++++||+.+.+++.. |++++
T Consensus       278 ~~~~~~~~~~~~~~~~--~-~~~~~l~~~~~a~~~~~~~~~~~k~vv~  322 (323)
T TIGR02823       278 AWQRLATDLKPRNLES--I-TREITLEELPEALEQILAGQHRGRTVVD  322 (323)
T ss_pred             HHHHHHHHhhcCCCcC--c-eeeecHHHHHHHHHHHhCCCccceEEEe
Confidence            3455666676776543  3 4789999999999999887766 88875

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=100.00  E-value=2.4e-34  Score=250.27  Aligned_cols=299  Identities=20%  Similarity=0.222  Sum_probs=239.8

Q ss_pred             CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeC--CCCCCcCCCCEEeeccC
Q 017457            8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG--EYVEEVKERDLVLPIFH   85 (371)
Q Consensus         8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG--~~v~~~~~Gd~V~~~~~   85 (371)
                      +|++++.++|+|+++|||+|..|.|+++. +..+....+..  ..|.-+|-..+|.++...  |....|++||.|+..  
T Consensus        26 ~F~lee~~vp~p~~GqvLl~~~ylS~DPy-mRgrm~d~~SY--~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~--  100 (340)
T COG2130          26 DFRLEEVDVPEPGEGQVLLRTLYLSLDPY-MRGRMSDAPSY--APPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGV--  100 (340)
T ss_pred             CceeEeccCCCCCcCceEEEEEEeccCHH-HeecccCCccc--CCCcCCCceeECCeeEEEEecCCCCCCCCCEEEec--
Confidence            58999999999999999999999999983 22222222222  455667777766555543  446779999999553  


Q ss_pred             CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCc--chhhc
Q 017457           86 RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPL--GIACL  163 (371)
Q Consensus        86 ~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~--~~aa~  163 (371)
                                                                        .+|++|..++.+.+.|++++.-+  .....
T Consensus       101 --------------------------------------------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~Lgv  130 (340)
T COG2130         101 --------------------------------------------------SGWQEYAISDGEGLRKLDPSPAPLSAYLGV  130 (340)
T ss_pred             --------------------------------------------------ccceEEEeechhhceecCCCCCCcchHHhh
Confidence                                                              27999999999999999865322  22334


Q ss_pred             cccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcceEEcCCCCCCc
Q 017457          164 LSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDK  241 (371)
Q Consensus       164 ~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~~~~  241 (371)
                      +..+..|||.+|...++.++|++|+|.+| |++|..+.|+||..|+ +|++++.+++|.+++++ +|.|.++|++.   +
T Consensus       131 LGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~---~  206 (340)
T COG2130         131 LGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKA---E  206 (340)
T ss_pred             cCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCc---c
Confidence            56699999999999999999999999987 9999999999999999 99999999999999988 99999999999   8


Q ss_pred             cHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCC--C--ceecC-HHHHhc-CceEEEeec-cC
Q 017457          242 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG--S--PISLN-SIEILK-GRSVCGTYF-GG  314 (371)
Q Consensus       242 ~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~--~--~~~~~-~~~~~~-~~~~~g~~~-~~  314 (371)
                      ++.+.+.+.++.|+|+.||++|+.. +...+..|+.. +|++.||..+.-  .  ..... ...++. ..++.|+.. .+
T Consensus       207 d~~~~L~~a~P~GIDvyfeNVGg~v-~DAv~~~ln~~-aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~  284 (340)
T COG2130         207 DFAQALKEACPKGIDVYFENVGGEV-LDAVLPLLNLF-ARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASD  284 (340)
T ss_pred             cHHHHHHHHCCCCeEEEEEcCCchH-HHHHHHhhccc-cceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechh
Confidence            9999999999999999999999998 99999999998 999999963211  1  11111 222333 788999876 33


Q ss_pred             CC--chhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEeCc
Q 017457          315 LK--PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDK  369 (371)
Q Consensus       315 ~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~~~  369 (371)
                      +.  ..+..+++.+++++|+++...  +-+-.||++++||.-+.+++.. |+|+++.+
T Consensus       285 ~~~~~~e~~~~l~~wv~~GKi~~~e--ti~dGlEnaP~Af~gLl~G~N~GK~vvKv~~  340 (340)
T COG2130         285 YDQRFPEALRELGGWVKEGKIQYRE--TIVDGLENAPEAFIGLLSGKNFGKLVVKVAD  340 (340)
T ss_pred             hhhhhHHHHHHHHHHHHcCceeeEe--eehhhhhccHHHHHHHhcCCccceEEEEecC
Confidence            33  235678899999999998875  3344699999999999999887 99998754

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=100.00  E-value=6e-34  Score=265.91  Aligned_cols=304  Identities=16%  Similarity=0.205  Sum_probs=230.5

Q ss_pred             CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457            8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD   87 (371)
Q Consensus         8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~   87 (371)
                      .+.+++.|.|+|+++||+||+.++++|++|.....+..... ..+|.++|||++|+|+++|  +++|++||+|++.+.. 
T Consensus        14 ~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~-~~~~~~~g~e~~G~V~~~~--~~~~~~Gd~V~~~~~~-   89 (326)
T cd08289          14 SVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIV-KRYPFIPGIDLAGTVVESN--DPRFKPGDEVIVTSYD-   89 (326)
T ss_pred             eeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCcccc-CCCCcCcccceeEEEEEcC--CCCCCCCCEEEEcccc-
Confidence            47888999999999999999999999999987665322111 1457899999999999964  4679999999775320 


Q ss_pred             CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccc
Q 017457           88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG  167 (371)
Q Consensus        88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~  167 (371)
                                             .|....                   |+|++|+.++++.++++|+++++++++.+++.
T Consensus        90 -----------------------~~~~~~-------------------g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~  127 (326)
T cd08289          90 -----------------------LGVSHH-------------------GGYSEYARVPAEWVVPLPKGLTLKEAMILGTA  127 (326)
T ss_pred             -----------------------cCCCCC-------------------CcceeEEEEcHHHeEECCCCCCHHHHhhhhhH
Confidence                                   222223                   49999999999999999999999999999999


Q ss_pred             hhhhHHHHHHHc--C-CCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccH
Q 017457          168 VSTGVGAAWKVA--G-VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTV  243 (371)
Q Consensus       168 ~~ta~~~l~~~~--~-~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~  243 (371)
                      +.||++++....  . ..++++|||+|+ |++|++++++|+++|+ +|+++++++++++.++++|++++++.++   . .
T Consensus       128 ~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~---~-~  202 (326)
T cd08289         128 GFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKEVIPREE---L-Q  202 (326)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCEEEcchh---H-H
Confidence            999998765332  3 345789999998 9999999999999999 8999999999999999999999988765   2 3


Q ss_pred             HHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHH-hcCceEEEeeccCCCchhhHH
Q 017457          244 SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFGGLKPRSDIA  322 (371)
Q Consensus       244 ~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~  322 (371)
                      .+.+.+++++++|++||++|+.. +..++++++++ |+++.+|... ....+++...+ .++.++.+....... .....
T Consensus       203 ~~~~~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~i~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  278 (326)
T cd08289         203 EESIKPLEKQRWAGAVDPVGGKT-LAYLLSTLQYG-GSVAVSGLTG-GGEVETTVFPFILRGVNLLGIDSVECP-MELRR  278 (326)
T ss_pred             HHHHHhhccCCcCEEEECCcHHH-HHHHHHHhhcC-CEEEEEeecC-CCCCCcchhhhhhccceEEEEEeEecC-chHHH
Confidence            45566665448999999999865 89999999998 9999999742 22233334445 448888887532211 11122


Q ss_pred             HHHHHHHcCCCC---CCCceeEEEecccHHHHHHHHhcCcee-eEEEEe
Q 017457          323 TLAQKYLDKELN---LGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM  367 (371)
Q Consensus       323 ~~~~~~~~g~~~---~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~  367 (371)
                      ++++.+.+ .+.   ....+.+.|+++++++||+.+.+++.. |+++++
T Consensus       279 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  326 (326)
T cd08289         279 RIWRRLAT-DLKPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL  326 (326)
T ss_pred             HHHHHHHh-hcCccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence            23333222 111   112346999999999999999887766 888753

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=4.7e-34  Score=265.49  Aligned_cols=300  Identities=20%  Similarity=0.305  Sum_probs=240.6

Q ss_pred             CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457            8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD   87 (371)
Q Consensus         8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~   87 (371)
                      .+++.+.+.|++.++||+||+.++++|+.|+....|..+..  ..|.++|||++|+|+++|+  .++++||+|++.... 
T Consensus        14 ~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~--~~~~~~g~e~~G~v~~vG~--~~~~~Gd~V~~~~~~-   88 (320)
T cd08243          14 VLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSV--KFPRVLGIEAVGEVEEAPG--GTFTPGQRVATAMGG-   88 (320)
T ss_pred             ceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC--CCCccccceeEEEEEEecC--CCCCCCCEEEEecCC-
Confidence            46677777788999999999999999999999888865443  5678899999999999995  579999999775320 


Q ss_pred             CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccc
Q 017457           88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG  167 (371)
Q Consensus        88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~  167 (371)
                                             .+...+                   |+|++|+.+++..++++|+++++.+++.++++
T Consensus        89 -----------------------~~~~~~-------------------g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~  126 (320)
T cd08243          89 -----------------------MGRTFD-------------------GSYAEYTLVPNEQVYAIDSDLSWAELAALPET  126 (320)
T ss_pred             -----------------------CCCCCC-------------------cccceEEEcCHHHcEeCCCCCCHHHHHhcchH
Confidence                                   111122                   48999999999999999999999999999999


Q ss_pred             hhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHH
Q 017457          168 VSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV  246 (371)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~  246 (371)
                      +.|||+++.....+++|++|||+|+ |++|++++++|+++|+ +|+++.+++++.+.++++|++++++. .   .++.+.
T Consensus       127 ~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~-~---~~~~~~  201 (320)
T cd08243         127 YYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID-D---GAIAEQ  201 (320)
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec-C---ccHHHH
Confidence            9999998877788999999999998 9999999999999999 89999999999999999999888754 3   467777


Q ss_pred             HHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCce-ecCHHH---HhcCceEEEeeccCCCchhhHH
Q 017457          247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPI-SLNSIE---ILKGRSVCGTYFGGLKPRSDIA  322 (371)
Q Consensus       247 i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~-~~~~~~---~~~~~~~~g~~~~~~~~~~~~~  322 (371)
                      +.++ ++++|+++|++++.. +...+++++++ |+++.+|........ ......   +..+.++.+....... ...++
T Consensus       202 i~~~-~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  277 (320)
T cd08243         202 LRAA-PGGFDKVLELVGTAT-LKDSLRHLRPG-GIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVP-QTPLQ  277 (320)
T ss_pred             HHHh-CCCceEEEECCChHH-HHHHHHHhccC-CEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhhh-HHHHH
Confidence            8777 559999999999865 89999999998 999999864222111 111222   2336667666433222 24578


Q ss_pred             HHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEE
Q 017457          323 TLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII  365 (371)
Q Consensus       323 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv  365 (371)
                      .++++++++.+.+.  .++.++++++++|++.+.++... |+++
T Consensus       278 ~~~~~~~~~~~~~~--~~~~~~l~~~~~a~~~~~~~~~~~kvvv  319 (320)
T cd08243         278 ELFDFVAAGHLDIP--PSKVFTFDEIVEAHAYMESNRAFGKVVV  319 (320)
T ss_pred             HHHHHHHCCceecc--cccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence            88999999976543  45889999999999999877655 7664

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=100.00  E-value=3.9e-34  Score=268.72  Aligned_cols=302  Identities=25%  Similarity=0.308  Sum_probs=240.0

Q ss_pred             CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCC
Q 017457            7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHR   86 (371)
Q Consensus         7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~   86 (371)
                      .++++++.+.|+|+++||+||+.++++|++|+....+.. ..  .+|.++|||++|+|+.+|++++.+++||+|+.....
T Consensus        12 ~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~--~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~   88 (339)
T cd08249          12 GLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IP--SYPAILGCDFAGTVVEVGSGVTRFKVGDRVAGFVHG   88 (339)
T ss_pred             CcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-cc--CCCceeeeeeeEEEEEeCCCcCcCCCCCEEEEEecc
Confidence            568888999999999999999999999999998876654 11  356789999999999999999999999999876542


Q ss_pred             CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcccc
Q 017457           87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC  166 (371)
Q Consensus        87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~  166 (371)
                      .|+                      +...                   .|+|++|+.++.+.++++|+++++.+++.+++
T Consensus        89 ~~~----------------------~~~~-------------------~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~  127 (339)
T cd08249          89 GNP----------------------NDPR-------------------NGAFQEYVVADADLTAKIPDNISFEEAATLPV  127 (339)
T ss_pred             ccC----------------------CCCC-------------------CCcccceEEechhheEECCCCCCHHHceecch
Confidence            221                      0011                   24899999999999999999999999999999


Q ss_pred             chhhhHHHHHHHcCC----------CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcC
Q 017457          167 GVSTGVGAAWKVAGV----------EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP  235 (371)
Q Consensus       167 ~~~ta~~~l~~~~~~----------~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~  235 (371)
                      .+.|||+++....++          +++++|||+|+ |.+|++++++|+++|+ +|+++. ++++++.++++|+++++++
T Consensus       128 ~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~~g~~~v~~~  205 (339)
T cd08249         128 GLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKSLGADAVFDY  205 (339)
T ss_pred             HHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHhcCCCEEEEC
Confidence            999999987665544          78999999997 9999999999999999 888887 5688999999999999988


Q ss_pred             CCCCCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhc--CCceEEEECccCCCCceecCHHHHhcCceEEEeecc
Q 017457          236 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSRE--GWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFG  313 (371)
Q Consensus       236 ~~~~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~  313 (371)
                      +.   .++.+.+++++++++|++||+++++..+..+++++++  + |+++.+|......       .+..+.++......
T Consensus       206 ~~---~~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~-g~~v~~g~~~~~~-------~~~~~~~~~~~~~~  274 (339)
T cd08249         206 HD---PDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGG-GKLVSLLPVPEET-------EPRKGVKVKFVLGY  274 (339)
T ss_pred             CC---chHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCC-CEEEEecCCCccc-------cCCCCceEEEEEee
Confidence            77   6788888888777999999999984558999999999  9 9999998643221       11112222221111


Q ss_pred             C---------CCchhhHHHHHHHHHcCCCCCCCceeEEEe--cccHHHHHHHHhcCc-ee-eEEEEe
Q 017457          314 G---------LKPRSDIATLAQKYLDKELNLGEFITHEVS--FHDINKAFDLLLEGK-SL-RCIIWM  367 (371)
Q Consensus       314 ~---------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~a~~~~~~~~-~~-kvvv~~  367 (371)
                      .         ......++.++++++++++.+.  ....++  ++++++|++.+.+++ .. |+++++
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~  339 (339)
T cd08249         275 TVFGEIPEDREFGEVFWKYLPELLEEGKLKPH--PVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL  339 (339)
T ss_pred             eecccccccccchHHHHHHHHHHHHcCCccCC--CceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence            1         0112356778899999987765  225677  999999999998877 55 888764

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=7e-34  Score=262.88  Aligned_cols=287  Identities=20%  Similarity=0.267  Sum_probs=235.1

Q ss_pred             CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457            8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD   87 (371)
Q Consensus         8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~   87 (371)
                      .+++++.+.|.++++||+||+.++++|+.|.+...+.      ..|.++|||++|+|+++|+.++.|++||+|+...   
T Consensus        13 ~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~------~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~---   83 (305)
T cd08270          13 RLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER------PDGAVPGWDAAGVVERAAADGSGPAVGARVVGLG---   83 (305)
T ss_pred             eeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC------CCCCcccceeEEEEEEeCCCCCCCCCCCEEEEec---
Confidence            4777788889999999999999999999999876522      2356899999999999999999999999996532   


Q ss_pred             CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccc
Q 017457           88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG  167 (371)
Q Consensus        88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~  167 (371)
                                                 ..                   |+|++|+.++.++++++|+++++.+++.+++.
T Consensus        84 ---------------------------~~-------------------g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~  117 (305)
T cd08270          84 ---------------------------AM-------------------GAWAELVAVPTGWLAVLPDGVSFAQAATLPVA  117 (305)
T ss_pred             ---------------------------CC-------------------cceeeEEEEchHHeEECCCCCCHHHHHHhHhH
Confidence                                       11                   48999999999999999999999999999999


Q ss_pred             hhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHH
Q 017457          168 VSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV  246 (371)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~  246 (371)
                      +.|||+++...... +|++|+|+|+ |++|++++++|+++|+ +|+.+++++++.+.++++|++.++....         
T Consensus       118 ~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---------  186 (305)
T cd08270         118 GVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVGGS---------  186 (305)
T ss_pred             HHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEeccc---------
Confidence            99999987555444 5999999998 9999999999999999 8999999999999999999876654322         


Q ss_pred             HHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc---CceEEEeeccC-CCchhhHH
Q 017457          247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK---GRSVCGTYFGG-LKPRSDIA  322 (371)
Q Consensus       247 i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~---~~~~~g~~~~~-~~~~~~~~  322 (371)
                        +++++++|+++|++|+.. +..++++++++ |+++.+|... .....++...+..   +.++.++.+.. ......++
T Consensus       187 --~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (305)
T cd08270         187 --ELSGAPVDLVVDSVGGPQ-LARALELLAPG-GTVVSVGSSS-GEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLA  261 (305)
T ss_pred             --cccCCCceEEEECCCcHH-HHHHHHHhcCC-CEEEEEeccC-CCcccccHHHHhcccccceEEEEEccCHHHHHHHHH
Confidence              122347999999999875 89999999998 9999998643 3334455555554   77888876553 11235678


Q ss_pred             HHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEe
Q 017457          323 TLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM  367 (371)
Q Consensus       323 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~  367 (371)
                      .++++++++++.+.  +.+.++++++++|++.+.+++.. |+++.+
T Consensus       262 ~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~  305 (305)
T cd08270         262 RLLGLVAAGRLDPR--IGWRGSWTEIDEAAEALLARRFRGKAVLDV  305 (305)
T ss_pred             HHHHHHHCCCccce--eccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            89999999988754  56899999999999999887665 888764

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.3e-33  Score=254.47  Aligned_cols=269  Identities=29%  Similarity=0.473  Sum_probs=222.0

Q ss_pred             eEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCC
Q 017457           23 EIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTC  102 (371)
Q Consensus        23 eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~  102 (371)
                      ||+|+|.++++|+.|++...|..+.. ..+|.++|+|++|+|+++|+.++.|++||+|+..+...|++|.+|..    .|
T Consensus         1 ~v~i~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~   75 (271)
T cd05188           1 EVLVRVEAAGLCGTDLHIRRGGYPPP-PKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LC   75 (271)
T ss_pred             CeEEEEEEEEecchhHHHHcCCCCcC-CCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hC
Confidence            68999999999999999998876511 15678999999999999999999999999999999999999999986    66


Q ss_pred             CCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccchhhhHHHHHHHcCCC
Q 017457          103 SKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVE  182 (371)
Q Consensus       103 ~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~  182 (371)
                      .....   .+....                   |+|++|+.++.+.++++|+++++.+++.+++++.+||+++.....++
T Consensus        76 ~~~~~---~~~~~~-------------------g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~  133 (271)
T cd05188          76 PGGGI---LGEGLD-------------------GGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLK  133 (271)
T ss_pred             CCCCE---eccccC-------------------CcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCC
Confidence            65543   333333                   48999999999999999999999999999999999999877766779


Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCC-CcCEEEEC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFEC  261 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g-g~d~vid~  261 (371)
                      ++++|||+|+|++|++++++++.+|. +|+++++++++.+.++++|++++++...   .++.+.+. .+.+ ++|+++++
T Consensus       134 ~~~~vli~g~~~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~-~~~~~~~d~vi~~  208 (271)
T cd05188         134 PGDTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYKE---EDLEEELR-LTGGGGADVVIDA  208 (271)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCCc---CCHHHHHH-HhcCCCCCEEEEC
Confidence            99999999986699999999999998 9999999999999999999988888776   56666666 4554 89999999


Q ss_pred             CCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCchhhHHHHHHH
Q 017457          262 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQK  327 (371)
Q Consensus       262 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  327 (371)
                      +++......++++++++ |+++.++..............+.+++++.++....   +.++++++++
T Consensus       209 ~~~~~~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~  270 (271)
T cd05188         209 VGGPETLAQALRLLRPG-GRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGT---REDFEEALDL  270 (271)
T ss_pred             CCCHHHHHHHHHhcccC-CEEEEEccCCCCCCcccHHHHHhcceEEEEeecCC---HHHHHHHHhh
Confidence            99844489999999998 99999987543322222333344588999886554   3467777665

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=100.00  E-value=5.5e-33  Score=260.46  Aligned_cols=299  Identities=20%  Similarity=0.225  Sum_probs=239.8

Q ss_pred             cEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCCC
Q 017457            9 LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDC   88 (371)
Q Consensus         9 l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~   88 (371)
                      ++.++++.|+|.+++|+|++.++++|++|+....+..+..  .+|.++|||++|+|+++|+.++.|++||+|.....   
T Consensus        18 ~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~--~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~---   92 (336)
T cd08252          18 LIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVP--GQPKILGWDASGVVEAVGSEVTLFKVGDEVYYAGD---   92 (336)
T ss_pred             eeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCC--CCCcccccceEEEEEEcCCCCCCCCCCCEEEEcCC---
Confidence            6666778888899999999999999999998887765433  46778999999999999999999999999966321   


Q ss_pred             CCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccch
Q 017457           89 GECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGV  168 (371)
Q Consensus        89 ~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~~  168 (371)
                                              +...                   |+|++|+.++.++++++|+++++++++.+++.+
T Consensus        93 ------------------------~~~~-------------------g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~  129 (336)
T cd08252          93 ------------------------ITRP-------------------GSNAEYQLVDERIVGHKPKSLSFAEAAALPLTS  129 (336)
T ss_pred             ------------------------CCCC-------------------ccceEEEEEchHHeeeCCCCCCHHHhhhhhhHH
Confidence                                    0012                   389999999999999999999999999999999


Q ss_pred             hhhHHHHHHHcCCCC-----CCeEEEEcC-ChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCc
Q 017457          169 STGVGAAWKVAGVEV-----GSTVAIFGL-GAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKKFGITDFINPATCGDK  241 (371)
Q Consensus       169 ~ta~~~l~~~~~~~~-----g~~VLI~G~-g~~G~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~  241 (371)
                      .+||+++.+...+.+     |++|+|+|+ |++|++++++|+++| + +|+++++++++.+.++++|++++++.++    
T Consensus       130 ~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~----  204 (336)
T cd08252         130 LTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKELGADHVINHHQ----  204 (336)
T ss_pred             HHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHhcCCcEEEeCCc----
Confidence            999998777788877     999999986 999999999999999 8 9999999999999999999999988654    


Q ss_pred             cHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHH-hcCceEEEeeccCCC----
Q 017457          242 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFGGLK----  316 (371)
Q Consensus       242 ~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~----  316 (371)
                      ++.+.+....++++|++||++++...+..++++++++ |+++.+|...    ..++...+ .++.++.+..+....    
T Consensus       205 ~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (336)
T cd08252         205 DLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQ-GHICLIVDPQ----EPLDLGPLKSKSASFHWEFMFTRSMFQT  279 (336)
T ss_pred             cHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCC-CEEEEecCCC----CcccchhhhcccceEEEEEeeccccccc
Confidence            4556666443348999999999766689999999998 9999998631    23344444 347777765443210    


Q ss_pred             -----chhhHHHHHHHHHcCCCCCCCc-eeEEEecccHHHHHHHHhcCcee-eEEE
Q 017457          317 -----PRSDIATLAQKYLDKELNLGEF-ITHEVSFHDINKAFDLLLEGKSL-RCII  365 (371)
Q Consensus       317 -----~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~a~~~~~~~~~~-kvvv  365 (371)
                           ....++++++++.++.+.+... ..+.++++++++|++.+.++... |+++
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~  335 (336)
T cd08252         280 PDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVL  335 (336)
T ss_pred             cchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEe
Confidence                 0234778899999997764311 12457999999999999887765 7775

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=1.7e-32  Score=254.27  Aligned_cols=298  Identities=23%  Similarity=0.279  Sum_probs=244.8

Q ss_pred             CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457            8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD   87 (371)
Q Consensus         8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~   87 (371)
                      .+.+.+.+.+++.++||+|+|.++++|+.|++...+..+.   .+|.++|||++|+|+.+|++++++++||+|+...   
T Consensus        13 ~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~---~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~---   86 (320)
T cd05286          13 VLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL---PLPFVLGVEGAGVVEAVGPGVTGFKVGDRVAYAG---   86 (320)
T ss_pred             ceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC---CCCccCCcceeEEEEEECCCCCCCCCCCEEEEec---
Confidence            3666677777789999999999999999999888776542   3567899999999999999999999999996632   


Q ss_pred             CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccc
Q 017457           88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG  167 (371)
Q Consensus        88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~  167 (371)
                                                 ..                   |+|++|+.++.+.++++|+++++.+++.+++.
T Consensus        87 ---------------------------~~-------------------g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  120 (320)
T cd05286          87 ---------------------------PP-------------------GAYAEYRVVPASRLVKLPDGISDETAAALLLQ  120 (320)
T ss_pred             ---------------------------CC-------------------CceeEEEEecHHHceeCCCCCCHHHHhhccch
Confidence                                       01                   38999999999999999999999999999999


Q ss_pred             hhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHH
Q 017457          168 VSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV  246 (371)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~  246 (371)
                      +.++++++....++++|++|||+|+ |++|++++++|+++|+ +|+++++++++.+.++++|++++++.+.   .++.+.
T Consensus       121 ~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~  196 (320)
T cd05286         121 GLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYRD---EDFVER  196 (320)
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCCc---hhHHHH
Confidence            9999998877888999999999996 9999999999999999 8999999999999999999999888766   678888


Q ss_pred             HHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHH-hcCceEEEeeccCCC-c----hh
Q 017457          247 IKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFGGLK-P----RS  319 (371)
Q Consensus       247 i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~-~----~~  319 (371)
                      +..++.+ ++|+++||+++.. ....+++++++ |+++.+|..... ...++...+ .++.++.+.....+. .    ..
T Consensus       197 ~~~~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (320)
T cd05286         197 VREITGGRGVDVVYDGVGKDT-FEGSLDSLRPR-GTLVSFGNASGP-VPPFDLLRLSKGSLFLTRPSLFHYIATREELLA  273 (320)
T ss_pred             HHHHcCCCCeeEEEECCCcHh-HHHHHHhhccC-cEEEEEecCCCC-CCccCHHHHHhcCcEEEEEehhhhcCCHHHHHH
Confidence            8888876 8999999999865 88999999998 999999863322 233444444 347777665432221 1    12


Q ss_pred             hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEE
Q 017457          320 DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW  366 (371)
Q Consensus       320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~  366 (371)
                      .+.+++++++++.+...  .++.|++++++++++.+.++... |+++.
T Consensus       274 ~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~~vv~~  319 (320)
T cd05286         274 RAAELFDAVASGKLKVE--IGKRYPLADAAQAHRDLESRKTTGKLLLI  319 (320)
T ss_pred             HHHHHHHHHHCCCCcCc--ccceEcHHHHHHHHHHHHcCCCCceEEEe
Confidence            34668888888876643  55889999999999999887665 87764

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=100.00  E-value=2.9e-32  Score=253.43  Aligned_cols=304  Identities=23%  Similarity=0.300  Sum_probs=247.1

Q ss_pred             CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457            8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD   87 (371)
Q Consensus         8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~   87 (371)
                      .+.+.+.|.|++.+++|+|++.++++|++|+....|...... ..|.++|||++|+|+++|+++++|++||+|++...- 
T Consensus        14 ~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~v~~~~~~-   91 (325)
T cd08253          14 VLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLP-PLPYVPGSDGAGVVEAVGEGVDGLKVGDRVWLTNLG-   91 (325)
T ss_pred             cceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCC-CCCeecccceEEEEEeeCCCCCCCCCCCEEEEeccc-
Confidence            477888999999999999999999999999998887654322 678899999999999999999999999999775420 


Q ss_pred             CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccc
Q 017457           88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG  167 (371)
Q Consensus        88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~  167 (371)
                                             . ....                   |++++|+.++.+.++++|+++++.+++.++++
T Consensus        92 -----------------------~-~~~~-------------------g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~  128 (325)
T cd08253          92 -----------------------W-GRRQ-------------------GTAAEYVVVPADQLVPLPDGVSFEQGAALGIP  128 (325)
T ss_pred             -----------------------c-CCCC-------------------cceeeEEEecHHHcEeCCCCCCHHHHhhhhhH
Confidence                                   0 0011                   48999999999999999999999999999999


Q ss_pred             hhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHH
Q 017457          168 VSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV  246 (371)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~  246 (371)
                      +.+||+++....++.+|++|+|+|+ |++|++++++++++|+ +|+++++++++.+.+.++|++++++...   .++.+.
T Consensus       129 ~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~  204 (325)
T cd08253         129 ALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFNYRA---EDLADR  204 (325)
T ss_pred             HHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCC---cCHHHH
Confidence            9999998877789999999999997 9999999999999999 8999999999999998899998888766   677788


Q ss_pred             HHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHH-HhcCceEEEeeccCCCc---hhhH
Q 017457          247 IKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGTYFGGLKP---RSDI  321 (371)
Q Consensus       247 i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~---~~~~  321 (371)
                      +.+++.+ ++|+++|++++.. ....+++++++ |+++.++...  ....++... +..+.++.+........   .+.+
T Consensus       205 ~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (325)
T cd08253         205 ILAATAGQGVDVIIEVLANVN-LAKDLDVLAPG-GRIVVYGSGG--LRGTIPINPLMAKEASIRGVLLYTATPEERAAAA  280 (325)
T ss_pred             HHHHcCCCceEEEEECCchHH-HHHHHHhhCCC-CEEEEEeecC--CcCCCChhHHHhcCceEEeeehhhcCHHHHHHHH
Confidence            8887766 8999999999876 78889999998 9999998643  223444444 33367777664332221   1234


Q ss_pred             HHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEE
Q 017457          322 ATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW  366 (371)
Q Consensus       322 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~  366 (371)
                      +.+.+++.++.+..  ..++.|++++++++++.+.++... |+++.
T Consensus       281 ~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~  324 (325)
T cd08253         281 EAIAAGLADGALRP--VIAREYPLEEAAAAHEAVESGGAIGKVVLD  324 (325)
T ss_pred             HHHHHHHHCCCccC--ccccEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence            55667777776543  356889999999999999886665 88765

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=100.00  E-value=1.7e-32  Score=256.49  Aligned_cols=297  Identities=22%  Similarity=0.247  Sum_probs=235.0

Q ss_pred             CCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCC-CCCCCCccccccccEEEEEeCCCCCCcCCCCEEeecc
Q 017457            6 GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-PKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIF   84 (371)
Q Consensus         6 ~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~   84 (371)
                      .+.+++++.|.|++.+++|+||+.++++|+.|.....+.... .+...+.++|+|++|+|+++|+.  .+++||+|+.. 
T Consensus        17 ~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~--~~~~Gd~V~~~-   93 (329)
T cd05288          17 PDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP--DFKVGDLVSGF-   93 (329)
T ss_pred             ccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC--CCCCCCEEecc-
Confidence            446889999999999999999999999999776544443211 11123567899999999999964  79999999542 


Q ss_pred             CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeec-ceeEECCCCCC--cchh
Q 017457           85 HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI-THVVKITPHIP--LGIA  161 (371)
Q Consensus        85 ~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~-~~~~~~P~~l~--~~~a  161 (371)
                                                                         ++|++|+.++. +.++++|++++  +.++
T Consensus        94 ---------------------------------------------------~~~~~~~~v~~~~~~~~lP~~~~~~~~~~  122 (329)
T cd05288          94 ---------------------------------------------------LGWQEYAVVDGASGLRKLDPSLGLPLSAY  122 (329)
T ss_pred             ---------------------------------------------------cceEEEEEecchhhcEECCcccCCCHHHH
Confidence                                                               27999999999 99999999995  4455


Q ss_pred             hc-cccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcceEEcCCCC
Q 017457          162 CL-LSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATC  238 (371)
Q Consensus       162 a~-~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~  238 (371)
                      +. +++++.|||+++.....+.++++|||+|+ |++|++++++|+++|+ +|+++++++++.+.+++ +|+++++++++ 
T Consensus       123 ~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~~g~~~~~~~~~-  200 (329)
T cd05288         123 LGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLVEELGFDAAINYKT-  200 (329)
T ss_pred             HHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhhcCCceEEecCC-
Confidence            55 88899999998877788999999999996 9999999999999999 89999999999999988 99999998876 


Q ss_pred             CCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCcee----cCHHH-HhcCceEEEeecc
Q 017457          239 GDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS----LNSIE-ILKGRSVCGTYFG  313 (371)
Q Consensus       239 ~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~----~~~~~-~~~~~~~~g~~~~  313 (371)
                        .++.+.+.+++++++|++||++|+.. +..++++++++ |+++.+|.........    ++... +.++.++.+..+.
T Consensus       201 --~~~~~~v~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (329)
T cd05288         201 --PDLAEALKEAAPDGIDVYFDNVGGEI-LDAALTLLNKG-GRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVS  276 (329)
T ss_pred             --hhHHHHHHHhccCCceEEEEcchHHH-HHHHHHhcCCC-ceEEEEeeccCcccccccccccHHHHhhCcceEEeecch
Confidence              67888888877668999999999865 89999999998 9999998643221111    22222 3447888887544


Q ss_pred             CCCc--hhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEE
Q 017457          314 GLKP--RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCI  364 (371)
Q Consensus       314 ~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvv  364 (371)
                      ....  .+.+.++++++.++.+.+..  ...+++++++++++.+.+++.. |++
T Consensus       277 ~~~~~~~~~~~~~~~~~~~g~i~~~~--~~~~~l~~~~~a~~~~~~~~~~gkvv  328 (329)
T cd05288         277 DYADRFPEALAELAKWLAEGKLKYRE--DVVEGLENAPEAFLGLFTGKNTGKLV  328 (329)
T ss_pred             hhHHHHHHHHHHHHHHHHCCCccccc--cccccHHHHHHHHHHHhcCCCcccee
Confidence            3321  24577888999999877552  2558999999999999876654 665

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd08251 polyketide_synthase polyketide synthase

Probab=100.00  E-value=3.2e-32  Score=250.94  Aligned_cols=292  Identities=24%  Similarity=0.308  Sum_probs=236.5

Q ss_pred             cCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCCCCCCcccc
Q 017457           16 VEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCK   95 (371)
Q Consensus        16 ~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~   95 (371)
                      .|++.+++|+||+.++++|+.|+....+.++... .+|.++|+|++|+|+++|+.++++++||+|++...          
T Consensus         2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~-~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~----------   70 (303)
T cd08251           2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMP-PYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTG----------   70 (303)
T ss_pred             CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCC-CCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecC----------
Confidence            5788999999999999999999998888754321 56889999999999999999999999999976431          


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccchhhhHHHH
Q 017457           96 SSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAA  175 (371)
Q Consensus        96 ~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l  175 (371)
                                        ...                   |+|++|+.++++.++++|+++++.+++.+++.+.+||+++
T Consensus        71 ------------------~~~-------------------g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l  113 (303)
T cd08251          71 ------------------ESM-------------------GGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF  113 (303)
T ss_pred             ------------------CCC-------------------cceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH
Confidence                              011                   3899999999999999999999999999999999999976


Q ss_pred             HHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCC-
Q 017457          176 WKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-  253 (371)
Q Consensus       176 ~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g-  253 (371)
                       +...+++|++|+|+|+ |.+|++++++|+++|+ +|+++.+++++.+.++++|++.+++...   .++.+.+.+++++ 
T Consensus       114 -~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~i~~~~~~~  188 (303)
T cd08251         114 -ARAGLAKGEHILIQTATGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVE---EDFEEEIMRLTGGR  188 (303)
T ss_pred             -HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCC---ccHHHHHHHHcCCC
Confidence             5788999999999976 9999999999999999 8999999999999999999999998776   6788888888877 


Q ss_pred             CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCC---C---chhhHHHHHHH
Q 017457          254 GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGL---K---PRSDIATLAQK  327 (371)
Q Consensus       254 g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---~---~~~~~~~~~~~  327 (371)
                      ++|+++|++++.. ....+++++++ |+++.+|.........+....+..+..+....+...   .   ..+.+.+++++
T Consensus       189 ~~d~v~~~~~~~~-~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (303)
T cd08251         189 GVDVVINTLSGEA-IQKGLNCLAPG-GRYVEIAMTALKSAPSVDLSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSL  266 (303)
T ss_pred             CceEEEECCcHHH-HHHHHHHhccC-cEEEEEeccCCCccCccChhHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHH
Confidence            8999999998755 88999999998 999999864322222333334444554444332111   1   12346778888


Q ss_pred             HHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEE
Q 017457          328 YLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCI  364 (371)
Q Consensus       328 ~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvv  364 (371)
                      +.++.+..  +.++.|++++++++++.+.++... |++
T Consensus       267 ~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~iv  302 (303)
T cd08251         267 VEEGELRP--TVSRIFPFDDIGEAYRYLSDRENIGKVV  302 (303)
T ss_pred             HHCCCccC--CCceEEcHHHHHHHHHHHHhCCCcceEe
Confidence            98987653  356889999999999999877655 665

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=100.00  E-value=4.1e-32  Score=252.07  Aligned_cols=298  Identities=21%  Similarity=0.276  Sum_probs=244.9

Q ss_pred             CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457            8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD   87 (371)
Q Consensus         8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~   87 (371)
                      .+++.+.+.|++.+++|+||+.++++|+.|+....|.++... .+|.++|||++|+|+++|++++++++||+|+...   
T Consensus        14 ~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~-~~~~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~~---   89 (323)
T cd05276          14 VLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPP-GASDILGLEVAGVVVAVGPGVTGWKVGDRVCALL---   89 (323)
T ss_pred             cceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCC-CCCCcccceeEEEEEeeCCCCCCCCCCCEEEEec---
Confidence            467777777888999999999999999999988877654322 5678999999999999999999999999996532   


Q ss_pred             CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccc
Q 017457           88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG  167 (371)
Q Consensus        88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~  167 (371)
                                                 .+                   |+|++|+.++.++++++|+++++.+++.++..
T Consensus        90 ---------------------------~~-------------------g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~  123 (323)
T cd05276          90 ---------------------------AG-------------------GGYAEYVVVPAGQLLPVPEGLSLVEAAALPEV  123 (323)
T ss_pred             ---------------------------CC-------------------CceeEEEEcCHHHhccCCCCCCHHHHhhchhH
Confidence                                       11                   38999999999999999999999999999999


Q ss_pred             hhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHH
Q 017457          168 VSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV  246 (371)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~  246 (371)
                      +.++|+++.+...+.++++|+|+|+ |++|+++++++++.|+ +|+++.+++++.+.++++|++.+++...   .++.+.
T Consensus       124 ~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~  199 (323)
T cd05276         124 FFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAINYRT---EDFAEE  199 (323)
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCc---hhHHHH
Confidence            9999998777788999999999997 9999999999999999 8999999999999998899988888766   677777


Q ss_pred             HHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHh-cCceEEEeeccCCC--c-----
Q 017457          247 IKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGGLK--P-----  317 (371)
Q Consensus       247 i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~--~-----  317 (371)
                      +.+++.+ ++|+++|++|+.. ....+++++++ |+++.+|..... ...++...++ ++.++.++......  .     
T Consensus       200 ~~~~~~~~~~d~vi~~~g~~~-~~~~~~~~~~~-g~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (323)
T cd05276         200 VKEATGGRGVDVILDMVGGDY-LARNLRALAPD-GRLVLIGLLGGA-KAELDLAPLLRKRLTLTGSTLRSRSLEEKAALA  276 (323)
T ss_pred             HHHHhCCCCeEEEEECCchHH-HHHHHHhhccC-CEEEEEecCCCC-CCCCchHHHHHhCCeEEEeeccchhhhccHHHH
Confidence            8777766 8999999999877 88899999997 999999863322 2344444443 48888887654321  0     


Q ss_pred             hhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEE
Q 017457          318 RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCI  364 (371)
Q Consensus       318 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvv  364 (371)
                      ...+.++++++.++++.+  ..++.|++++++++++.+.++... |++
T Consensus       277 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv  322 (323)
T cd05276         277 AAFREHVWPLFASGRIRP--VIDKVFPLEEAAEAHRRMESNEHIGKIV  322 (323)
T ss_pred             HHHHHHHHHHHHCCCccC--CcceEEcHHHHHHHHHHHHhCCCcceEe
Confidence            123466788888887653  356899999999999999876654 665

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=100.00  E-value=1.1e-32  Score=259.90  Aligned_cols=300  Identities=21%  Similarity=0.270  Sum_probs=228.7

Q ss_pred             cEEEEEecCCC-CCCeEEEEEeEeecccccccccccCCCC-------------CCCCCCccccccccEEEEEeCCCCCCc
Q 017457            9 LVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDL-------------PKLPLPVIFGHEAVGVVESVGEYVEEV   74 (371)
Q Consensus         9 l~~~~~~~~~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~-------------~~~~~p~~~G~e~~G~Vv~vG~~v~~~   74 (371)
                      +++++.+.|+| .++||+||+.++++|++|+....|....             ....+|.++|||++|+|+++|+.++++
T Consensus        16 ~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~v~~vG~~v~~~   95 (350)
T cd08248          16 LLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRDCSGVVVDIGSGVKSF   95 (350)
T ss_pred             eeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecceeEEEEEecCCCcccC
Confidence            78889999999 4999999999999999999988774210             012568899999999999999999999


Q ss_pred             CCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCC
Q 017457           75 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP  154 (371)
Q Consensus        75 ~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~  154 (371)
                      ++||+|+.....                           ..                   .|+|++|+.++++.++++|+
T Consensus        96 ~~Gd~V~~~~~~---------------------------~~-------------------~g~~~~~~~v~~~~~~~lp~  129 (350)
T cd08248          96 EIGDEVWGAVPP---------------------------WS-------------------QGTHAEYVVVPENEVSKKPK  129 (350)
T ss_pred             CCCCEEEEecCC---------------------------CC-------------------CccceeEEEecHHHeecCCC
Confidence            999999764320                           01                   14899999999999999999


Q ss_pred             CCCcchhhccccchhhhHHHHHHHcCCCC----CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCc
Q 017457          155 HIPLGIACLLSCGVSTGVGAAWKVAGVEV----GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI  229 (371)
Q Consensus       155 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~----g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga  229 (371)
                      ++++.+++.+++.+.|||+++.+...+.+    |++|+|+|+ |++|++++++|+++|+ +|+++.++ ++.+.++++|+
T Consensus       130 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~-~~~~~~~~~g~  207 (350)
T cd08248         130 NLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA-HVTTTCST-DAIPLVKSLGA  207 (350)
T ss_pred             CCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCc-chHHHHHHhCC
Confidence            99999999999999999998766666654    999999996 9999999999999999 78888754 67778888999


Q ss_pred             ceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCc--eec-----C-HHHH
Q 017457          230 TDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP--ISL-----N-SIEI  301 (371)
Q Consensus       230 ~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~--~~~-----~-~~~~  301 (371)
                      +++++...   .++.+.+...  +++|++||++++.. ...++++++++ |+++.+|.......  ...     . ...+
T Consensus       208 ~~~~~~~~---~~~~~~l~~~--~~vd~vi~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  280 (350)
T cd08248         208 DDVIDYNN---EDFEEELTER--GKFDVILDTVGGDT-EKWALKLLKKG-GTYVTLVSPLLKNTDKLGLVGGMLKSAVDL  280 (350)
T ss_pred             ceEEECCC---hhHHHHHHhc--CCCCEEEECCChHH-HHHHHHHhccC-CEEEEecCCcccccccccccchhhhhHHHH
Confidence            88888765   4555544332  38999999999885 89999999998 99999985321111  011     0 0011


Q ss_pred             hc-Cce-EE-Ee---eccCCCchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEE
Q 017457          302 LK-GRS-VC-GT---YFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII  365 (371)
Q Consensus       302 ~~-~~~-~~-g~---~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv  365 (371)
                      .. ... +. +.   +.........+.+++++++++.+..  .+++.|++++++++++.+.+++.. |+++
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~~vv~  349 (350)
T cd08248         281 LKKNVKSLLKGSHYRWGFFSPSGSALDELAKLVEDGKIKP--VIDKVFPFEEVPEAYEKVESGHARGKTVI  349 (350)
T ss_pred             HHHHHHHHhcCCCeeEEEECCCHHHHHHHHHHHhCCCEec--ccceeecHHHHHHHHHHHhcCCCceEEEe
Confidence            11 100 00 00   0000112456888999999997653  356899999999999999877654 7765

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=100.00  E-value=1.1e-31  Score=250.35  Aligned_cols=302  Identities=16%  Similarity=0.202  Sum_probs=235.7

Q ss_pred             CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457            8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD   87 (371)
Q Consensus         8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~   87 (371)
                      .+++++.|.|+|.++||+||+.++++|++|.....|.+...+ .+|.++|||++|+|++  ++++++++||+|++...  
T Consensus        14 ~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~-~~~~~~g~e~~G~V~~--~~~~~~~~Gd~V~~~~~--   88 (324)
T cd08288          14 SAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVR-TFPLVPGIDLAGTVVE--SSSPRFKPGDRVVLTGW--   88 (324)
T ss_pred             ceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccC-CCCCccccceEEEEEe--CCCCCCCCCCEEEECCc--
Confidence            588999999999999999999999999999998877653221 4577899999999998  77788999999977421  


Q ss_pred             CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccc
Q 017457           88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG  167 (371)
Q Consensus        88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~  167 (371)
                       +                     .+....                   |+|++|+.++.+.++++|+++++++++.+++.
T Consensus        89 -~---------------------~~~~~~-------------------g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~  127 (324)
T cd08288          89 -G---------------------VGERHW-------------------GGYAQRARVKADWLVPLPEGLSARQAMAIGTA  127 (324)
T ss_pred             -c---------------------CCCCCC-------------------CcceeEEEEchHHeeeCCCCCCHHHHhhhhhH
Confidence             0                     111112                   48999999999999999999999999999999


Q ss_pred             hhhhHHHHH--HHcCCC-CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccH
Q 017457          168 VSTGVGAAW--KVAGVE-VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTV  243 (371)
Q Consensus       168 ~~ta~~~l~--~~~~~~-~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~  243 (371)
                      +++|++++.  +..+.. ++++|||+|+ |++|++++|+|+++|+ +|++++.++++.+.++++|+++++++++     .
T Consensus       128 ~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~-----~  201 (324)
T cd08288         128 GFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASEIIDRAE-----L  201 (324)
T ss_pred             HHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCEEEEcch-----h
Confidence            999987643  123455 5789999998 9999999999999999 8999998999999999999999998765     2


Q ss_pred             HHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHH-hcCceEEEeeccCCC---chh
Q 017457          244 SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFGGLK---PRS  319 (371)
Q Consensus       244 ~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~---~~~  319 (371)
                      ...+..++.+++|.++|++++.. +...+..++.+ |+++.+|.... ....++...+ .++.++.+..+....   ..+
T Consensus       202 ~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~-g~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (324)
T cd08288         202 SEPGRPLQKERWAGAVDTVGGHT-LANVLAQTRYG-GAVAACGLAGG-ADLPTTVMPFILRGVTLLGIDSVMAPIERRRA  278 (324)
T ss_pred             hHhhhhhccCcccEEEECCcHHH-HHHHHHHhcCC-CEEEEEEecCC-CCCCcchhhhhccccEEEEEEeecccchhhHH
Confidence            23555666557899999999755 77888889987 99999987422 2223444444 458888887533322   123


Q ss_pred             hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEe
Q 017457          320 DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM  367 (371)
Q Consensus       320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~  367 (371)
                      .+..+.+++.++.+.+   +.+.++++++++|++.+.+++.. |+++.+
T Consensus       279 ~~~~~~~~~~~~~~~~---i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~  324 (324)
T cd08288         279 AWARLARDLDPALLEA---LTREIPLADVPDAAEAILAGQVRGRVVVDV  324 (324)
T ss_pred             HHHHHHHHHhcCCccc---cceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence            4566777777886643   35899999999999999887766 888753

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=8.6e-32  Score=250.69  Aligned_cols=300  Identities=21%  Similarity=0.271  Sum_probs=242.4

Q ss_pred             cEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCCC
Q 017457            9 LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDC   88 (371)
Q Consensus         9 l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~   88 (371)
                      +.+++.+.|++.+++|+|++.++++|++|..+..+...... ..|.++|||++|+|+.+|+.+++|++||+|+.....  
T Consensus        15 ~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~-~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~--   91 (326)
T cd08272          15 FELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARP-PLPAILGCDVAGVVEAVGEGVTRFRVGDEVYGCAGG--   91 (326)
T ss_pred             eEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCC-CCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCC--
Confidence            77778888889999999999999999999998877654222 457789999999999999999999999999764310  


Q ss_pred             CCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccch
Q 017457           89 GECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGV  168 (371)
Q Consensus        89 ~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~~  168 (371)
                                            .+ ..                   .|+|++|+.++.++++++|+++++.+++.+++.+
T Consensus        92 ----------------------~~-~~-------------------~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~  129 (326)
T cd08272          92 ----------------------LG-GL-------------------QGSLAEYAVVDARLLALKPANLSMREAAALPLVG  129 (326)
T ss_pred             ----------------------cC-CC-------------------CCceeEEEEecHHHcccCCCCCCHHHHHHhHHHH
Confidence                                  00 01                   1489999999999999999999999999999999


Q ss_pred             hhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHH
Q 017457          169 STGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVI  247 (371)
Q Consensus       169 ~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i  247 (371)
                      .+||+++.+..+++++++++|+|+ |.+|++++++|+.+|+ +|+++.++ ++.+.++++|++.+++...   . +.+.+
T Consensus       130 ~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~---~-~~~~~  203 (326)
T cd08272         130 ITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIYYRE---T-VVEYV  203 (326)
T ss_pred             HHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEecch---h-HHHHH
Confidence            999998878889999999999996 9999999999999999 89998887 8888998899988888766   5 77888


Q ss_pred             HHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccC--C---C---ch
Q 017457          248 KEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGG--L---K---PR  318 (371)
Q Consensus       248 ~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~---~---~~  318 (371)
                      .+++.+ ++|+++|++++.. ....+++++++ |+++.++...   ...+... ..++.++.+..+..  .   .   ..
T Consensus       204 ~~~~~~~~~d~v~~~~~~~~-~~~~~~~l~~~-g~~v~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (326)
T cd08272         204 AEHTGGRGFDVVFDTVGGET-LDASFEAVALY-GRVVSILGGA---THDLAPL-SFRNATYSGVFTLLPLLTGEGRAHHG  277 (326)
T ss_pred             HHhcCCCCCcEEEECCChHH-HHHHHHHhccC-CEEEEEecCC---ccchhhH-hhhcceEEEEEcccccccccchhhHH
Confidence            888877 8999999999866 88899999997 9999998642   1122211 13467777665332  1   1   13


Q ss_pred             hhHHHHHHHHHcCCCCCCCcee-EEEecccHHHHHHHHhcCcee-eEEEEe
Q 017457          319 SDIATLAQKYLDKELNLGEFIT-HEVSFHDINKAFDLLLEGKSL-RCIIWM  367 (371)
Q Consensus       319 ~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~-kvvv~~  367 (371)
                      ..+..++++++++.+..  .++ +.|++++++++++.+.+++.. |+++++
T Consensus       278 ~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~  326 (326)
T cd08272         278 EILREAARLVERGQLRP--LLDPRTFPLEEAAAAHARLESGSARGKIVIDV  326 (326)
T ss_pred             HHHHHHHHHHHCCCccc--ccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence            45777888888886653  334 889999999999999876655 888753

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=100.00  E-value=1.1e-31  Score=253.41  Aligned_cols=310  Identities=20%  Similarity=0.222  Sum_probs=229.0

Q ss_pred             ccCCCCcEEEEEecCCC---CCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCC-CcCCCC
Q 017457            3 RIPGKPLVIEEIEVEPP---KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE-EVKERD   78 (371)
Q Consensus         3 ~~~~~~l~~~~~~~~~~---~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~-~~~~Gd   78 (371)
                      .+++..+++++++.|.|   .+++|+||+.++++|++|+....+..... ...|.++|+|++|+|+++|++++ +|++||
T Consensus         7 ~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~~Gd   85 (352)
T cd08247           7 KNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHF-KVKEKGLGRDYSGVIVKVGSNVASEWKVGD   85 (352)
T ss_pred             ecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhccccccc-ccCCCccCceeEEEEEEeCcccccCCCCCC
Confidence            34555677777777665   89999999999999999998775432211 12477899999999999999998 899999


Q ss_pred             EEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecc----eeEECCC
Q 017457           79 LVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT----HVVKITP  154 (371)
Q Consensus        79 ~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~----~~~~~P~  154 (371)
                      +|++.....|                         ...                   |+|++|++++..    .++++|+
T Consensus        86 ~V~~~~~~~~-------------------------~~~-------------------g~~~~~~~v~~~~~~~~~~~lP~  121 (352)
T cd08247          86 EVCGIYPHPY-------------------------GGQ-------------------GTLSQYLLVDPKKDKKSITRKPE  121 (352)
T ss_pred             EEEEeecCCC-------------------------CCC-------------------ceeeEEEEEccccccceeEECCC
Confidence            9987543110                         011                   489999999987    7999999


Q ss_pred             CCCcchhhccccchhhhHHHHHHHc-CCCCCCeEEEEcC-ChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHHhCcce
Q 017457          155 HIPLGIACLLSCGVSTGVGAAWKVA-GVEVGSTVAIFGL-GAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKKFGITD  231 (371)
Q Consensus       155 ~l~~~~aa~~~~~~~ta~~~l~~~~-~~~~g~~VLI~G~-g~~G~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~lga~~  231 (371)
                      ++++.+++.+++++.|||+++.... .+++|++|+|+|+ |.+|++++++|+++|. ++|+++. ++++.+.++++|+++
T Consensus       122 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~~g~~~  200 (352)
T cd08247         122 NISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKKLGADH  200 (352)
T ss_pred             CCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHHhCCCE
Confidence            9999999999999999999876666 7999999999998 8999999999998854 3566665 456666788899999


Q ss_pred             EEcCCCCCCcc---HHHHHHHh-hCC-CcCEEEECCCChHHHHHHHHHhh---cCCceEEEECccCCCCce---------
Q 017457          232 FINPATCGDKT---VSQVIKEM-TDG-GADYCFECIGLTSVMNDAFNSSR---EGWGKTVILGVEMHGSPI---------  294 (371)
Q Consensus       232 v~~~~~~~~~~---~~~~i~~~-~~g-g~d~vid~~g~~~~~~~~~~~l~---~~~G~~v~~g~~~~~~~~---------  294 (371)
                      +++.++   .+   +...+.+. +++ ++|++|||+|+......++++++   ++ |+++.++........         
T Consensus       201 ~i~~~~---~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~-G~~v~~~~~~~~~~~~~~~~~~~~  276 (352)
T cd08247         201 FIDYDA---HSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKN-GHYVTIVGDYKANYKKDTFNSWDN  276 (352)
T ss_pred             EEecCC---CcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCC-CEEEEEeCCCcccccchhhhhccc
Confidence            998766   33   44444444 424 99999999998655889999999   98 999987532211000         


Q ss_pred             -ecCHHHHhcCc-----eEEEeeccCCCchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEE
Q 017457          295 -SLNSIEILKGR-----SVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW  366 (371)
Q Consensus       295 -~~~~~~~~~~~-----~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~  366 (371)
                       .+....+..+.     .+.... ... ..+.++++++++.++.+.+  +.++.++++++++|++.+.+++.. |++++
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  351 (352)
T cd08247         277 PSANARKLFGSLGLWSYNYQFFL-LDP-NADWIEKCAELIADGKVKP--PIDSVYPFEDYKEAFERLKSNRAKGKVVIK  351 (352)
T ss_pred             cchhhhhhhhhhcCCCcceEEEE-ecC-CHHHHHHHHHHHhCCCeEe--eeccEecHHHHHHHHHHHHcCCCCCcEEEe
Confidence             01111121122     222111 111 1245788999999997653  356899999999999999887655 88875

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=6.5e-32  Score=252.60  Aligned_cols=297  Identities=22%  Similarity=0.281  Sum_probs=232.8

Q ss_pred             CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCC
Q 017457            7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHR   86 (371)
Q Consensus         7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~   86 (371)
                      ..+++++.+.|+|.+++|+|++.++++|++|..+..|...... .+|.++|||++|+|+.+|+.++.|++||+|..... 
T Consensus        13 ~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~-~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~-   90 (331)
T cd08273          13 EVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQP-PLPFTPGYDLVGRVDALGSGVTGFEVGDRVAALTR-   90 (331)
T ss_pred             ccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCC-CCCcccccceEEEEEEeCCCCccCCCCCEEEEeCC-
Confidence            4588888999999999999999999999999998888764322 56889999999999999999999999999966421 


Q ss_pred             CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcccc
Q 017457           87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC  166 (371)
Q Consensus        87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~  166 (371)
                                                   .                   |+|++|+.++.+.++++|+++++.+++.+++
T Consensus        91 -----------------------------~-------------------g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~  122 (331)
T cd08273          91 -----------------------------V-------------------GGNAEYINLDAKYLVPVPEGVDAAEAVCLVL  122 (331)
T ss_pred             -----------------------------C-------------------cceeeEEEechHHeEECCCCCCHHHHHhhhh
Confidence                                         1                   3899999999999999999999999999999


Q ss_pred             chhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHH
Q 017457          167 GVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQ  245 (371)
Q Consensus       167 ~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~  245 (371)
                      ++.+||+++.....+.++++|+|+|+ |++|++++++|+.+|+ +|++++. +++.+.++++|+.. ++...   .++..
T Consensus       123 ~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~~~~---~~~~~  196 (331)
T cd08273         123 NYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-IDYRT---KDWLP  196 (331)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-EcCCC---cchhh
Confidence            99999998777788999999999997 9999999999999999 8999987 88888898899754 44443   34443


Q ss_pred             HHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecC--HH-----------HHhc--CceEEEe
Q 017457          246 VIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLN--SI-----------EILK--GRSVCGT  310 (371)
Q Consensus       246 ~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~--~~-----------~~~~--~~~~~g~  310 (371)
                      .  +..++++|++++++++.. ...++++++++ |+++.+|.........+.  ..           ....  +.++.+.
T Consensus       197 ~--~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (331)
T cd08273         197 A--MLTPGGVDVVFDGVGGES-YEESYAALAPG-GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYV  272 (331)
T ss_pred             h--hccCCCceEEEECCchHH-HHHHHHHhcCC-CEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEee
Confidence            3  334458999999999888 89999999998 999999864332221111  10           0111  2222222


Q ss_pred             eccCC-C---chhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEE
Q 017457          311 YFGGL-K---PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII  365 (371)
Q Consensus       311 ~~~~~-~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv  365 (371)
                      ..... .   ..+.+++++++++++.+..  .+.+.+++++++++++.+.+++.. |+++
T Consensus       273 ~~~~~~~p~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvv~  330 (331)
T cd08273         273 WRDRAEDPKLFRQDLTELLDLLAKGKIRP--KIAKRLPLSEVAEAHRLLESGKVVGKIVL  330 (331)
T ss_pred             chhcccCHHHHHHHHHHHHHHHHCCCccC--CcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence            21110 0   1356788999999997754  356889999999999998876655 6664

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.4e-31  Score=249.43  Aligned_cols=298  Identities=24%  Similarity=0.287  Sum_probs=238.2

Q ss_pred             CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457            8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD   87 (371)
Q Consensus         8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~   87 (371)
                      .+.+++.|.|++.+++|+||+.++++|++|+....+.....  ..|.++|||++|+|+.+|+.++++++||+|++...  
T Consensus        14 ~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~--~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~--   89 (325)
T cd08271          14 QLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAW--SYPHVPGVDGAGVVVAVGAKVTGWKVGDRVAYHAS--   89 (325)
T ss_pred             eeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC--CCCcccccceEEEEEEeCCCCCcCCCCCEEEeccC--
Confidence            68899999999999999999999999999998887765432  34678999999999999999999999999976431  


Q ss_pred             CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccc
Q 017457           88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG  167 (371)
Q Consensus        88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~  167 (371)
                                               +...                   |+|++|+.++.+.++++|+++++.+++.+.+.
T Consensus        90 -------------------------~~~~-------------------~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~  125 (325)
T cd08271          90 -------------------------LARG-------------------GSFAEYTVVDARAVLPLPDSLSFEEAAALPCA  125 (325)
T ss_pred             -------------------------CCCC-------------------ccceeEEEeCHHHeEECCCCCCHHHHHhhhhh
Confidence                                     1112                   38999999999999999999999999999999


Q ss_pred             hhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHH
Q 017457          168 VSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV  246 (371)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~  246 (371)
                      +.+|++++.....+++|++++|+|+ |++|++++++|++.|+ +|+++. ++++.+.+.++|++.+++...   .++.+.
T Consensus       126 ~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~~~~~---~~~~~~  200 (325)
T cd08271         126 GLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVIDYND---EDVCER  200 (325)
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEecCCC---ccHHHH
Confidence            9999998877788999999999998 8999999999999999 788876 677888888899998888766   667778


Q ss_pred             HHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeec-----cCC-----
Q 017457          247 IKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYF-----GGL-----  315 (371)
Q Consensus       247 i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~-----~~~-----  315 (371)
                      +.+++.+ ++|++++++++.. ....+++++++ |+++.++..... . .  ...+..+..+....+     ...     
T Consensus       201 ~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-G~~v~~~~~~~~-~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (325)
T cd08271         201 IKEITGGRGVDAVLDTVGGET-AAALAPTLAFN-GHLVCIQGRPDA-S-P--DPPFTRALSVHEVALGAAHDHGDPAAWQ  274 (325)
T ss_pred             HHHHcCCCCCcEEEECCCcHh-HHHHHHhhccC-CEEEEEcCCCCC-c-c--hhHHhhcceEEEEEecccccccchhhHH
Confidence            8888776 8999999999877 67789999998 999999753221 1 1  111222333332221     111     


Q ss_pred             CchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEE
Q 017457          316 KPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW  366 (371)
Q Consensus       316 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~  366 (371)
                      ...+.+.+++++++++.+.+.  ..+.|+++++.++++.+.++... |++++
T Consensus       275 ~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~~kiv~~  324 (325)
T cd08271         275 DLRYAGEELLELLAAGKLEPL--VIEVLPFEQLPEALRALKDRHTRGKIVVT  324 (325)
T ss_pred             HHHHHHHHHHHHHHCCCeeec--cceEEcHHHHHHHHHHHHcCCccceEEEE
Confidence            112345678888988876543  44889999999999999877655 88775

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=4.5e-31  Score=245.93  Aligned_cols=305  Identities=26%  Similarity=0.330  Sum_probs=244.3

Q ss_pred             CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457            8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD   87 (371)
Q Consensus         8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~   87 (371)
                      .+.+.+.+.|++.+++|+|+|.++++|+.|+....+.+... ..+|.++|||++|+|+.+|++++++++||+|+..+.  
T Consensus        14 ~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~-~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~--   90 (328)
T cd08268          14 VLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEP-PPLPARLGYEAAGVVEAVGAGVTGFAVGDRVSVIPA--   90 (328)
T ss_pred             eeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCC-CCCCCCCCcceEEEEEeeCCCCCcCCCCCEEEeccc--
Confidence            46677777788999999999999999999998887765432 145778999999999999999999999999977532  


Q ss_pred             CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccc
Q 017457           88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG  167 (371)
Q Consensus        88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~  167 (371)
                                             .++...                   |+|++|+.++.+.++++|+++++.+++.+++.
T Consensus        91 -----------------------~~~~~~-------------------g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  128 (328)
T cd08268          91 -----------------------ADLGQY-------------------GTYAEYALVPAAAVVKLPDGLSFVEAAALWMQ  128 (328)
T ss_pred             -----------------------cccCCC-------------------ccceEEEEechHhcEeCCCCCCHHHHHHhhhH
Confidence                                   111122                   38999999999999999999999999999999


Q ss_pred             hhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHH
Q 017457          168 VSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV  246 (371)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~  246 (371)
                      +.+||+++.....+.++++++|+|+ |++|++++++++..|+ +++.+++++++.+.+.++|++.+++.+.   .++.+.
T Consensus       129 ~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~  204 (328)
T cd08268         129 YLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIVTDE---EDLVAE  204 (328)
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEecCC---ccHHHH
Confidence            9999998877788999999999998 9999999999999999 8999999999999998899888888766   677777


Q ss_pred             HHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHH-HHhcCceEEEeeccCC-Cch----h
Q 017457          247 IKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI-EILKGRSVCGTYFGGL-KPR----S  319 (371)
Q Consensus       247 i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~-~~~----~  319 (371)
                      +.+.+.+ ++|++++++++.. ...++++++++ |+++.+|.... ....++.. .+.++.++.+...... ...    .
T Consensus       205 ~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (328)
T cd08268         205 VLRITGGKGVDVVFDPVGGPQ-FAKLADALAPG-GTLVVYGALSG-EPTPFPLKAALKKSLTFRGYSLDEITLDPEARRR  281 (328)
T ss_pred             HHHHhCCCCceEEEECCchHh-HHHHHHhhccC-CEEEEEEeCCC-CCCCCchHHHhhcCCEEEEEecccccCCHHHHHH
Confidence            8877776 8999999999865 88999999998 99999986432 22233333 3445788877654321 111    2


Q ss_pred             hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEE
Q 017457          320 DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW  366 (371)
Q Consensus       320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~  366 (371)
                      .++.+.+++.++.+...  .+..|++++++++++.+.+++.. |++++
T Consensus       282 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~vv~~  327 (328)
T cd08268         282 AIAFILDGLASGALKPV--VDRVFPFDDIVEAHRYLESGQQIGKIVVT  327 (328)
T ss_pred             HHHHHHHHHHCCCCcCC--cccEEcHHHHHHHHHHHHcCCCCceEEEe
Confidence            24445566667765543  45889999999999998877655 88775

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=100.00  E-value=4.6e-31  Score=245.54  Aligned_cols=299  Identities=21%  Similarity=0.258  Sum_probs=245.0

Q ss_pred             cEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCCC
Q 017457            9 LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDC   88 (371)
Q Consensus         9 l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~   88 (371)
                      +.+.+.+.+++.+++|+||+.++++|+.|+....+.+..+. .+|.++|||++|+|+.+|+.+.++++||+|+...    
T Consensus        15 ~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~-~~~~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~~----   89 (325)
T TIGR02824        15 LVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPP-GASDILGLEVAGEVVAVGEGVSRWKVGDRVCALV----   89 (325)
T ss_pred             ceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCC-CCCCCccceeEEEEEEeCCCCCCCCCCCEEEEcc----
Confidence            66667777778999999999999999999988877654321 4678999999999999999999999999996531    


Q ss_pred             CCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccch
Q 017457           89 GECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGV  168 (371)
Q Consensus        89 ~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~~  168 (371)
                                                .+                   |+|++|+.++.+.++++|+++++.+++.+++++
T Consensus        90 --------------------------~~-------------------~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~  124 (325)
T TIGR02824        90 --------------------------AG-------------------GGYAEYVAVPAGQVLPVPEGLSLVEAAALPETF  124 (325)
T ss_pred             --------------------------CC-------------------CcceeEEEecHHHcEeCCCCCCHHHHHhhhHHH
Confidence                                      11                   389999999999999999999999999999999


Q ss_pred             hhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHH
Q 017457          169 STGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVI  247 (371)
Q Consensus       169 ~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i  247 (371)
                      .+||+++.+...++++++++|+|+ |++|++++++++.+|+ +|+++.+++++.+.++++|++.+++...   .++...+
T Consensus       125 ~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~  200 (325)
T TIGR02824       125 FTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAINYRE---EDFVEVV  200 (325)
T ss_pred             HHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecCc---hhHHHHH
Confidence            999998778889999999999997 9999999999999999 8999999999988888899888887665   5677788


Q ss_pred             HHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHH-hcCceEEEeeccCC-Cc------h
Q 017457          248 KEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFGGL-KP------R  318 (371)
Q Consensus       248 ~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~-~~------~  318 (371)
                      ..++.+ ++|++++++++.. ....+++++++ |+++.+|...... ..++...+ .++.++.+...... ..      .
T Consensus       201 ~~~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (325)
T TIGR02824       201 KAETGGKGVDVILDIVGGSY-LNRNIKALALD-GRIVQIGFQGGRK-AELDLGPLLAKRLTITGSTLRARPVAEKAAIAA  277 (325)
T ss_pred             HHHcCCCCeEEEEECCchHH-HHHHHHhhccC-cEEEEEecCCCCc-CCCChHHHHhcCCEEEEEehhhcchhhhHHHHH
Confidence            887776 8999999999865 88999999998 9999998633222 24555554 44889998865442 10      1


Q ss_pred             hhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEE
Q 017457          319 SDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW  366 (371)
Q Consensus       319 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~  366 (371)
                      ..+.+++++++++.+..  ..++.+++++++++++.+.++... |++++
T Consensus       278 ~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  324 (325)
T TIGR02824       278 ELREHVWPLLASGRVRP--VIDKVFPLEDAAQAHALMESGDHIGKIVLT  324 (325)
T ss_pred             HHHHHHHHHHHCCcccC--ccccEEeHHHHHHHHHHHHhCCCcceEEEe
Confidence            23456778888886653  356889999999999998877655 87765

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.2e-30  Score=242.39  Aligned_cols=296  Identities=22%  Similarity=0.255  Sum_probs=227.0

Q ss_pred             EEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCC-CCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCCC
Q 017457           10 VIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLP-KLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDC   88 (371)
Q Consensus        10 ~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~-~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~   88 (371)
                      ++++.+.|+|.++||+|++.++++|++|+....|..... ....|..+|||++|+|+++|++++++++||+|+.....  
T Consensus        15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~--   92 (319)
T cd08267          15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPP--   92 (319)
T ss_pred             ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccC--
Confidence            777889999999999999999999999999887765210 01356689999999999999999999999999765320  


Q ss_pred             CCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccch
Q 017457           89 GECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGV  168 (371)
Q Consensus        89 ~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~~  168 (371)
                                               ...                   |+|++|+.++.+.++++|+++++.+++.+++.+
T Consensus        93 -------------------------~~~-------------------g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~  128 (319)
T cd08267          93 -------------------------KGG-------------------GALAEYVVAPESGLAKKPEGVSFEEAAALPVAG  128 (319)
T ss_pred             -------------------------CCC-------------------ceeeEEEEechhheEECCCCCCHHHHHhhhhHH
Confidence                                     011                   389999999999999999999999999999999


Q ss_pred             hhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHH
Q 017457          169 STGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVI  247 (371)
Q Consensus       169 ~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i  247 (371)
                      .+||+++.....+++|++|+|+|+ |++|++++++|+.+|+ +|++++++ ++.+.++++|++++++.+.   .++.   
T Consensus       129 ~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~---~~~~---  200 (319)
T cd08267         129 LTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTT---EDFV---  200 (319)
T ss_pred             HHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCC---CCcc---
Confidence            999998777777999999999998 9999999999999999 89888865 8888888999988887665   3443   


Q ss_pred             HHhhCC-CcCEEEECCCChH-HHHHHHHHhhcCCceEEEECccCCCCceec---CHHHHhcCceEEEeeccCCCchhhHH
Q 017457          248 KEMTDG-GADYCFECIGLTS-VMNDAFNSSREGWGKTVILGVEMHGSPISL---NSIEILKGRSVCGTYFGGLKPRSDIA  322 (371)
Q Consensus       248 ~~~~~g-g~d~vid~~g~~~-~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~  322 (371)
                      ...+.+ ++|++++|+++.. .....+..++++ |+++.+|..........   ..........+.......  ..+.+.
T Consensus       201 ~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  277 (319)
T cd08267         201 ALTAGGEKYDVIFDAVGNSPFSLYRASLALKPG-GRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKP--NAEDLE  277 (319)
T ss_pred             hhccCCCCCcEEEECCCchHHHHHHhhhccCCC-CEEEEeccccccccccccccchhhccccceEEEEEecC--CHHHHH
Confidence            344455 8999999998532 233444448997 99999986432221111   111122223333322111  156788


Q ss_pred             HHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEE
Q 017457          323 TLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCI  364 (371)
Q Consensus       323 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvv  364 (371)
                      +++++++++++..  +.++.|+++++++|++.+.++... |++
T Consensus       278 ~~~~~l~~~~~~~--~~~~~~~~~~i~~a~~~~~~~~~~~~vv  318 (319)
T cd08267         278 QLAELVEEGKLKP--VIDSVYPLEDAPEAYRRLKSGRARGKVV  318 (319)
T ss_pred             HHHHHHHCCCeee--eeeeEEcHHHHHHHHHHHhcCCCCCcEe
Confidence            9999999987653  366899999999999999876554 655

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.98  E-value=4.8e-30  Score=240.22  Aligned_cols=301  Identities=21%  Similarity=0.319  Sum_probs=238.9

Q ss_pred             CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457            8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD   87 (371)
Q Consensus         8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~   87 (371)
                      .+.+.+.+.|+|.+++|+||+.++++|+.|.....|.+... +..|.++|||++|+|+.+|+.++++++||+|+....  
T Consensus        13 ~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~--   89 (337)
T cd08275          13 KLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSA-PKPPFVPGFECAGTVEAVGEGVKDFKVGDRVMGLTR--   89 (337)
T ss_pred             ceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCC-CCCCCCCcceeEEEEEEECCCCcCCCCCCEEEEecC--
Confidence            47777778888999999999999999999999888765432 156778999999999999999999999999976421  


Q ss_pred             CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccc
Q 017457           88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG  167 (371)
Q Consensus        88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~  167 (371)
                                                  .                   |+|++|+.++.+.++++|+++++.+++.++++
T Consensus        90 ----------------------------~-------------------~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~  122 (337)
T cd08275          90 ----------------------------F-------------------GGYAEVVNVPADQVFPLPDGMSFEEAAAFPVN  122 (337)
T ss_pred             ----------------------------C-------------------CeeeeEEEecHHHeEECCCCCCHHHHhhhhHH
Confidence                                        1                   38999999999999999999999999999999


Q ss_pred             hhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHH
Q 017457          168 VSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQ  245 (371)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~  245 (371)
                      +.+||+++.....++++++|+|+|+ |.+|++++++|+++ +. .++.. ..+++.+.++.+|++.+++.+.   .++.+
T Consensus       123 ~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~-~~~~~-~~~~~~~~~~~~g~~~~~~~~~---~~~~~  197 (337)
T cd08275         123 YLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNV-TVVGT-ASASKHEALKENGVTHVIDYRT---QDYVE  197 (337)
T ss_pred             HHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCc-EEEEe-CCHHHHHHHHHcCCcEEeeCCC---CcHHH
Confidence            9999998877888999999999998 99999999999998 44 33332 2456788888899988888776   67888


Q ss_pred             HHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCC--ce-------------ecCHHH-HhcCceEEE
Q 017457          246 VIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGS--PI-------------SLNSIE-ILKGRSVCG  309 (371)
Q Consensus       246 ~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~--~~-------------~~~~~~-~~~~~~~~g  309 (371)
                      .++.++++++|+++|++++.. ...++++++++ |+++.+|......  ..             .+.... +..+.++.+
T Consensus       198 ~~~~~~~~~~d~v~~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (337)
T cd08275         198 EVKKISPEGVDIVLDALGGED-TRKSYDLLKPM-GRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLG  275 (337)
T ss_pred             HHHHHhCCCceEEEECCcHHH-HHHHHHhhccC-cEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEE
Confidence            888877668999999999875 88999999998 9999998632211  11             111122 333788888


Q ss_pred             eeccCCC-c----hhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEe
Q 017457          310 TYFGGLK-P----RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM  367 (371)
Q Consensus       310 ~~~~~~~-~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~  367 (371)
                      +.+.... .    ...+.++++++.++.+.+.  .++.|++++++++++.+.+++.. |+++++
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~  337 (337)
T cd08275         276 FNLGWLFEERELLTEVMDKLLKLYEEGKIKPK--IDSVFPFEEVGEAMRRLQSRKNIGKVVLTP  337 (337)
T ss_pred             eechhhhhChHHHHHHHHHHHHHHHCCCCCCc--eeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            7543221 1    1236778888889876543  56889999999999999887655 888753

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.98  E-value=1.4e-30  Score=238.04  Aligned_cols=281  Identities=22%  Similarity=0.223  Sum_probs=229.8

Q ss_pred             CeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCCCCCCccccCCCCCC
Q 017457           22 WEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNT  101 (371)
Q Consensus        22 ~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~  101 (371)
                      +||+||+.++++|++|++...|..  .  .+|.++|||++|+|+++|+.++++++||+|+....                
T Consensus         1 ~~v~i~v~~~~~~~~d~~~~~g~~--~--~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~~----------------   60 (293)
T cd05195           1 DEVEVEVKAAGLNFRDVLVALGLL--P--GDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLAP----------------   60 (293)
T ss_pred             CceEEEEEEEecCHHHHHHHhCCC--C--CCCCccceeeeEEEEeecCCccCCCCCCEEEEEec----------------
Confidence            589999999999999999888764  2  45778999999999999999999999999966421                


Q ss_pred             CCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccchhhhHHHHHHHcCC
Q 017457          102 CSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGV  181 (371)
Q Consensus       102 ~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~  181 (371)
                                                        |+|++|+.++.+.++++|+++++.+++.+++++.+|++++.+...+
T Consensus        61 ----------------------------------g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~  106 (293)
T cd05195          61 ----------------------------------GAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARL  106 (293)
T ss_pred             ----------------------------------CcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhcc
Confidence                                              4899999999999999999999999999989999999987777889


Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhC--cceEEcCCCCCCccHHHHHHHhhCC-CcCE
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG--ITDFINPATCGDKTVSQVIKEMTDG-GADY  257 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lg--a~~v~~~~~~~~~~~~~~i~~~~~g-g~d~  257 (371)
                      ++|++|+|+|+ |++|++++++|+.+|+ +|+++.+++++.+.++++|  ++.+++...   .++.+.+.+++.+ ++|+
T Consensus       107 ~~g~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~  182 (293)
T cd05195         107 QKGESVLIHAAAGGVGQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSRD---LSFADGILRATGGRGVDV  182 (293)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecCc---hhHHHHHHHHhCCCCceE
Confidence            99999999986 9999999999999999 8999998999999998888  778888766   6788888888877 8999


Q ss_pred             EEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCC------chhhHHHHHHHHHcC
Q 017457          258 CFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLK------PRSDIATLAQKYLDK  331 (371)
Q Consensus       258 vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~------~~~~~~~~~~~~~~g  331 (371)
                      +++++++.. +..++++++++ |+++.+|.........+....+..+.++.+..+....      ..+.+.+++++++++
T Consensus       183 vi~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (293)
T cd05195         183 VLNSLSGEL-LRASWRCLAPF-GRFVEIGKRDILSNSKLGMRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAG  260 (293)
T ss_pred             EEeCCCchH-HHHHHHhcccC-ceEEEeeccccccCCccchhhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCC
Confidence            999999885 99999999998 9999998643221122333333335566654332211      123467788999999


Q ss_pred             CCCCCCceeEEEecccHHHHHHHHhcCcee-eEE
Q 017457          332 ELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCI  364 (371)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvv  364 (371)
                      ++.  +..+..+++++++++++.+.+++.. |++
T Consensus       261 ~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~~iv  292 (293)
T cd05195         261 VLK--PLPPTVVPSASEIDAFRLMQSGKHIGKVV  292 (293)
T ss_pred             Ccc--cCCCeeechhhHHHHHHHHhcCCCCceec
Confidence            765  3456789999999999999887665 655

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=99.98  E-value=1.8e-30  Score=239.81  Aligned_cols=290  Identities=20%  Similarity=0.284  Sum_probs=231.2

Q ss_pred             cEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCC-CCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457            9 LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-PKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD   87 (371)
Q Consensus         9 l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~   87 (371)
                      +.+++.+.|++.++||+|++.++++|+.|+....|.... ....+|.++|||++|+|+.+|++++++++||+|+..+.  
T Consensus        15 ~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~G~~V~~~~~--   92 (309)
T cd05289          15 LELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTGFKVGDEVFGMTP--   92 (309)
T ss_pred             eeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCCCCCCCEEEEccC--
Confidence            556677778899999999999999999999988776531 11155789999999999999999999999999977532  


Q ss_pred             CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccc
Q 017457           88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG  167 (371)
Q Consensus        88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~  167 (371)
                                             .  ...                   |+|++|+.++...++++|+++++.+++.+++.
T Consensus        93 -----------------------~--~~~-------------------g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  128 (309)
T cd05289          93 -----------------------F--TRG-------------------GAYAEYVVVPADELALKPANLSFEEAAALPLA  128 (309)
T ss_pred             -----------------------C--CCC-------------------CcceeEEEecHHHhccCCCCCCHHHHHhhhHH
Confidence                                   0  011                   38999999999999999999999999999989


Q ss_pred             hhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHH
Q 017457          168 VSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV  246 (371)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~  246 (371)
                      +.+|++++.....+.++++|+|+|+ |.+|++++++++..|+ +|+++..++ +.+.++++|++++++.+.   .++.+ 
T Consensus       129 ~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~~~~~~---~~~~~-  202 (309)
T cd05289         129 GLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEVIDYTK---GDFER-  202 (309)
T ss_pred             HHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEEEeCCC---Cchhh-
Confidence            9999998766667999999999997 9999999999999999 888888777 888888899888887665   34433 


Q ss_pred             HHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCchhhHHHHH
Q 017457          247 IKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLA  325 (371)
Q Consensus       247 i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  325 (371)
                         .+.+ ++|++++++++.. ...++++++++ |+++.+|.....  ..   ..+..+.++....+...  ...+..++
T Consensus       203 ---~~~~~~~d~v~~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~--~~---~~~~~~~~~~~~~~~~~--~~~~~~~~  270 (309)
T cd05289         203 ---AAAPGGVDAVLDTVGGET-LARSLALVKPG-GRLVSIAGPPPA--EQ---AAKRRGVRAGFVFVEPD--GEQLAELA  270 (309)
T ss_pred             ---ccCCCCceEEEECCchHH-HHHHHHHHhcC-cEEEEEcCCCcc--hh---hhhhccceEEEEEeccc--HHHHHHHH
Confidence               3334 8999999999885 89999999998 999999863321  11   22233566665543222  46788899


Q ss_pred             HHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEE
Q 017457          326 QKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCI  364 (371)
Q Consensus       326 ~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvv  364 (371)
                      ++++++.+..  .+++.|++++++++++.+.++... |++
T Consensus       271 ~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv  308 (309)
T cd05289         271 ELVEAGKLRP--VVDRVFPLEDAAEAHERLESGHARGKVV  308 (309)
T ss_pred             HHHHCCCEEE--eeccEEcHHHHHHHHHHHHhCCCCCcEe
Confidence            9999987543  366899999999999998876654 655

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=99.98  E-value=6.5e-30  Score=237.46  Aligned_cols=298  Identities=25%  Similarity=0.406  Sum_probs=241.5

Q ss_pred             CcEEEEEecCCCC-CCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCC
Q 017457            8 PLVIEEIEVEPPK-AWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHR   86 (371)
Q Consensus         8 ~l~~~~~~~~~~~-~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~   86 (371)
                      .+++.+.+ |++. +++|+|++.++++|++|+....|.+.... ..|.++|||++|+|+.+|+++.++++||+|+.... 
T Consensus        14 ~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~-   90 (323)
T cd08241          14 DLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKP-PLPFVPGSEVAGVVEAVGEGVTGFKVGDRVVALTG-   90 (323)
T ss_pred             eeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCC-CCCCcccceeEEEEEEeCCCCCCCCCCCEEEEecC-
Confidence            46666776 6666 49999999999999999988877653221 44668999999999999999999999999976430 


Q ss_pred             CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcccc
Q 017457           87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC  166 (371)
Q Consensus        87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~  166 (371)
                                                   .                   |+|++|+.++.+.++++|+++++.+++.+.+
T Consensus        91 -----------------------------~-------------------~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~  122 (323)
T cd08241          91 -----------------------------Q-------------------GGFAEEVVVPAAAVFPLPDGLSFEEAAALPV  122 (323)
T ss_pred             -----------------------------C-------------------ceeEEEEEcCHHHceeCCCCCCHHHHhhhhh
Confidence                                         1                   3899999999999999999999999988888


Q ss_pred             chhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHH
Q 017457          167 GVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQ  245 (371)
Q Consensus       167 ~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~  245 (371)
                      .+.+|++++.....+.++++|+|+|+ |++|++++++|+..|+ +|++++.++++.+.++++|++.+++...   .++.+
T Consensus       123 ~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~  198 (323)
T cd08241         123 TYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVIDYRD---PDLRE  198 (323)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceeeecCC---ccHHH
Confidence            99999998776788999999999998 9999999999999999 8999999999999998899988888766   67888


Q ss_pred             HHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCH-HHHhcCceEEEeeccCCCc------
Q 017457          246 VIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNS-IEILKGRSVCGTYFGGLKP------  317 (371)
Q Consensus       246 ~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~------  317 (371)
                      .+.+.+.+ ++|++++++|+.. ...++++++++ |+++.+|...... ..+.. ..+.++.++.+..+..+..      
T Consensus       199 ~i~~~~~~~~~d~v~~~~g~~~-~~~~~~~~~~~-g~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (323)
T cd08241         199 RVKALTGGRGVDVVYDPVGGDV-FEASLRSLAWG-GRLLVIGFASGEI-PQIPANLLLLKNISVVGVYWGAYARREPELL  275 (323)
T ss_pred             HHHHHcCCCCcEEEEECccHHH-HHHHHHhhccC-CEEEEEccCCCCc-CcCCHHHHhhcCcEEEEEecccccchhHHHH
Confidence            88888777 8999999999855 88999999998 9999998632211 11222 2234478888876544321      


Q ss_pred             hhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEE
Q 017457          318 RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII  365 (371)
Q Consensus       318 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv  365 (371)
                      ...+.++++++.++.+..  +.++.|++++++++++.+.++... |+++
T Consensus       276 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~vvv  322 (323)
T cd08241         276 RANLAELFDLLAEGKIRP--HVSAVFPLEQAAEALRALADRKATGKVVL  322 (323)
T ss_pred             HHHHHHHHHHHHCCCccc--ccceEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence            245677889999987643  356889999999999988876654 7765

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>smart00829 PKS_ER Enoylreductase

Probab=99.97  E-value=5.4e-30  Score=233.95  Aligned_cols=276  Identities=21%  Similarity=0.259  Sum_probs=224.4

Q ss_pred             EEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCC
Q 017457           26 IKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKF  105 (371)
Q Consensus        26 Vkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~  105 (371)
                      ||+.++++|++|++...|.++     .|.++|||++|+|+++|+.++.|++||+|+....                    
T Consensus         2 i~v~~~~i~~~d~~~~~g~~~-----~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~--------------------   56 (288)
T smart00829        2 VEVRAAGLNFRDVLIALGLLP-----GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLAP--------------------   56 (288)
T ss_pred             eeEEEEecCHHHHHHhcCCCC-----CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEcC--------------------
Confidence            899999999999999887643     3568999999999999999999999999966421                    


Q ss_pred             CCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccchhhhHHHHHHHcCCCCCC
Q 017457          106 GRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGS  185 (371)
Q Consensus       106 ~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~  185 (371)
                                                    |+|++|+.++.+.++++|+++++.+++.+++.+.++++++.....+.+|+
T Consensus        57 ------------------------------g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~  106 (288)
T smart00829       57 ------------------------------GSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGE  106 (288)
T ss_pred             ------------------------------CceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCC
Confidence                                          38999999999999999999999999999999999999877778899999


Q ss_pred             eEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCc--ceEEcCCCCCCccHHHHHHHhhCC-CcCEEEEC
Q 017457          186 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI--TDFINPATCGDKTVSQVIKEMTDG-GADYCFEC  261 (371)
Q Consensus       186 ~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga--~~v~~~~~~~~~~~~~~i~~~~~g-g~d~vid~  261 (371)
                      +|+|+|+ |.+|++++++|+++|+ +|+++++++++.+.++++|+  +.++++..   .++.+.+.+.+++ ++|+++|+
T Consensus       107 ~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~  182 (288)
T smart00829      107 SVLIHAAAGGVGQAAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSRD---LSFADEILRATGGRGVDVVLNS  182 (288)
T ss_pred             EEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCCC---ccHHHHHHHHhCCCCcEEEEeC
Confidence            9999986 9999999999999999 89999999999999999998  77888766   6787888887776 89999999


Q ss_pred             CCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCC--C---chhhHHHHHHHHHcCCCCCC
Q 017457          262 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGL--K---PRSDIATLAQKYLDKELNLG  336 (371)
Q Consensus       262 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~---~~~~~~~~~~~~~~g~~~~~  336 (371)
                      +++.. ....+++++++ |+++.+|.........++...+..+.++.+..+...  .   ..+.+..++++++++++.+.
T Consensus       183 ~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (288)
T smart00829      183 LAGEF-LDASLRCLAPG-GRFVEIGKRDIRDNSQLGMAPFRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPL  260 (288)
T ss_pred             CCHHH-HHHHHHhccCC-cEEEEEcCcCCccccccchhhhcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCc
Confidence            99654 88899999997 999999864211122333333334666666543211  1   12346778888888876643


Q ss_pred             CceeEEEecccHHHHHHHHhcCcee-eEE
Q 017457          337 EFITHEVSFHDINKAFDLLLEGKSL-RCI  364 (371)
Q Consensus       337 ~~~~~~~~~~~~~~a~~~~~~~~~~-kvv  364 (371)
                        ..+.|++++++++++.+.++... |++
T Consensus       261 --~~~~~~~~~~~~~~~~~~~~~~~~~iv  287 (288)
T smart00829      261 --PVTVFPISDVEDAFRYMQQGKHIGKVV  287 (288)
T ss_pred             --CceEEcHHHHHHHHHHHhcCCCcceEe
Confidence              34789999999999999887654 655

Enoylreductase in Polyketide synthases.

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.96  E-value=1.3e-28  Score=242.96  Aligned_cols=295  Identities=17%  Similarity=0.135  Sum_probs=247.1

Q ss_pred             CcEEEEEecC---CCCCCeEEEEEeEeecccccccccccCCCCCC-----CCCCccccccccEEEEEeCCCCCCcCCCCE
Q 017457            8 PLVIEEIEVE---PPKAWEIRIKILCTSLCHSDVTFWKSSTDLPK-----LPLPVIFGHEAVGVVESVGEYVEEVKERDL   79 (371)
Q Consensus         8 ~l~~~~~~~~---~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~-----~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~   79 (371)
                      .+++.+.|..   +..++.=+.-|-|++||..|++...|+.+...     ......+|-|++|+          .+-|.|
T Consensus      1428 SlrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrR 1497 (2376)
T KOG1202|consen 1428 SLRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRR 1497 (2376)
T ss_pred             ceeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcE
Confidence            4566666643   45677779999999999999999999876541     12335789999886          567999


Q ss_pred             EeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcc
Q 017457           80 VLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLG  159 (371)
Q Consensus        80 V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~  159 (371)
                      |..                              +-.-.                   ++++.+.++.+++|.+|++.+++
T Consensus      1498 vM~------------------------------mvpAk-------------------sLATt~l~~rd~lWevP~~WTle 1528 (2376)
T KOG1202|consen 1498 VMG------------------------------MVPAK-------------------SLATTVLASRDFLWEVPSKWTLE 1528 (2376)
T ss_pred             EEE------------------------------eeehh-------------------hhhhhhhcchhhhhhCCcccchh
Confidence            943                              33222                   78999999999999999999999


Q ss_pred             hhhccccchhhhHHHHHHHcCCCCCCeEEEEc-CChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcceEEc
Q 017457          160 IACLLSCGVSTGVGAAWKVAGVEVGSTVAIFG-LGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFIN  234 (371)
Q Consensus       160 ~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G-~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~v~~  234 (371)
                      +|+..||.|.||||+|..+++.++|+++||++ +|++|++||.+|.+.|+ +|+.+..++||++++++    +-..++-|
T Consensus      1529 eAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~N 1607 (2376)
T KOG1202|consen 1529 EASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFAN 1607 (2376)
T ss_pred             hcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhcccc
Confidence            99999999999999999999999999999995 49999999999999999 99999999999999876    33567778


Q ss_pred             CCCCCCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeecc
Q 017457          235 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFG  313 (371)
Q Consensus       235 ~~~~~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~  313 (371)
                      +++   .+|.+-+...|.| |+|+|+|+...+. ++.+++||..+ |+|..+|-..-....++.+..|++|.+++|..+.
T Consensus      1608 SRd---tsFEq~vl~~T~GrGVdlVLNSLaeEk-LQASiRCLa~~-GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLD 1682 (2376)
T KOG1202|consen 1608 SRD---TSFEQHVLWHTKGRGVDLVLNSLAEEK-LQASIRCLALH-GRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLD 1682 (2376)
T ss_pred             ccc---ccHHHHHHHHhcCCCeeeehhhhhHHH-HHHHHHHHHhc-CeeeeecceecccCCcchhhhhhcccceeeeehh
Confidence            777   8999999999999 9999999999988 99999999998 9999999644444556777778889999998765


Q ss_pred             CCC--chhhHHHHHHHHHcCCCC--CCCceeEEEecccHHHHHHHHhcCcee-eEEEEe
Q 017457          314 GLK--PRSDIATLAQKYLDKELN--LGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM  367 (371)
Q Consensus       314 ~~~--~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~  367 (371)
                      ..-  +.+++.++..++++|.-.  ..++-+++|+=.++++||+++.++++. |||+++
T Consensus      1683 svmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikv 1741 (2376)
T KOG1202|consen 1683 SVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKV 1741 (2376)
T ss_pred             hhhcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHhccCccceEEEEE
Confidence            443  345678888998887433  456668999999999999999999987 999986

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.96  E-value=5.5e-27  Score=213.95  Aligned_cols=245  Identities=27%  Similarity=0.390  Sum_probs=194.4

Q ss_pred             CCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceee
Q 017457           51 PLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIH  130 (371)
Q Consensus        51 ~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~  130 (371)
                      ++|.++|||++|+|+++|++++++++||+|+..                                               
T Consensus        19 ~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~-----------------------------------------------   51 (277)
T cd08255          19 PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF-----------------------------------------------   51 (277)
T ss_pred             cCCcccCcceeEEEEEeCCCCCCCCCCCEEEec-----------------------------------------------
Confidence            588999999999999999999999999999653                                               


Q ss_pred             cccCcccccceeeeecceeEECCCCCCcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCe
Q 017457          131 HFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASK  210 (371)
Q Consensus       131 ~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~  210 (371)
                           +.|++|+.++.+.++++|+++++.+++.+ +.+++||+++ ...++++++++||+|+|.+|++++++|+++|+++
T Consensus        52 -----~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~  124 (277)
T cd08255          52 -----GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAKAAGARE  124 (277)
T ss_pred             -----CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCc
Confidence                 16899999999999999999999999888 7899999976 4788999999999988999999999999999943


Q ss_pred             EEEEcCChhHHHHHHHhC-cceEEcCCCCCCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECcc
Q 017457          211 IIGVDINPEKFEIGKKFG-ITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       211 Vi~~~~~~~~~~~~~~lg-a~~v~~~~~~~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      |+++++++++.+.++++| ++.+++..+           ..+.+ ++|++||+++........+++++++ |+++.+|..
T Consensus       125 vi~~~~~~~~~~~~~~~g~~~~~~~~~~-----------~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~~~~g~~  192 (277)
T cd08255         125 VVGVDPDAARRELAEALGPADPVAADTA-----------DEIGGRGADVVIEASGSPSALETALRLLRDR-GRVVLVGWY  192 (277)
T ss_pred             EEEECCCHHHHHHHHHcCCCccccccch-----------hhhcCCCCCEEEEccCChHHHHHHHHHhcCC-cEEEEEecc
Confidence            999999999999999999 555554322           11233 8999999988766689999999998 999999874


Q ss_pred             CCCCceecCHHHHhc-CceEEEeeccCCC---------chhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcC
Q 017457          289 MHGSPISLNSIEILK-GRSVCGTYFGGLK---------PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEG  358 (371)
Q Consensus       289 ~~~~~~~~~~~~~~~-~~~~~g~~~~~~~---------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~  358 (371)
                      ... . ......+.. ..++.+.......         ..+.+++++++++++++..  .+.+.|+++++++|++.+.++
T Consensus       193 ~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~  268 (277)
T cd08255         193 GLK-P-LLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEA--LITHRVPFEDAPEAYRLLFED  268 (277)
T ss_pred             CCC-c-cccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCccc--cccCccCHHHHHHHHHHHHcC
Confidence            332 1 111222332 4566666433211         1246888999999997553  356889999999999999877


Q ss_pred             --ceeeEEE
Q 017457          359 --KSLRCII  365 (371)
Q Consensus       359 --~~~kvvv  365 (371)
                        ...|+++
T Consensus       269 ~~~~~k~~~  277 (277)
T cd08255         269 PPECLKVVL  277 (277)
T ss_pred             CccceeeeC
Confidence              3347764

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=99.94  E-value=4.3e-25  Score=191.90  Aligned_cols=293  Identities=22%  Similarity=0.229  Sum_probs=218.7

Q ss_pred             EEec-CCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCc-----cccccccEEEEEeCCCCCCcCCCCEEeeccCC
Q 017457           13 EIEV-EPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPV-----IFGHEAVGVVESVGEYVEEVKERDLVLPIFHR   86 (371)
Q Consensus        13 ~~~~-~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~-----~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~   86 (371)
                      ++++ .++.+++||||.+|-+..|.-..-++...+.. .-.|+     +.| .++|+|++.  .-+++++||.|....  
T Consensus        28 ~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~-y~~~~~~G~pi~g-~GV~kVi~S--~~~~~~~GD~v~g~~--  101 (343)
T KOG1196|consen   28 TVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSD-YAPPYEPGKPIDG-FGVAKVIDS--GHPNYKKGDLVWGIV--  101 (343)
T ss_pred             eecccCCCCCccEEeEeeeecCCHHHHhhccCCCccc-ccCcccCCcEecC-CceEEEEec--CCCCCCcCceEEEec--
Confidence            3443 46789999999999999765322222111110 01122     344 678999985  446799999995532  


Q ss_pred             CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecce--eEECC--CCCCcchhh
Q 017457           87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITH--VVKIT--PHIPLGIAC  162 (371)
Q Consensus        87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~--~~~~P--~~l~~~~aa  162 (371)
                                                                        +|.||.+++...  .+++|  .++++--..
T Consensus       102 --------------------------------------------------gWeeysii~~~~~~~~ki~~~~~~pLs~yl  131 (343)
T KOG1196|consen  102 --------------------------------------------------GWEEYSVITPNDLEHFKIQHPTDVPLSYYL  131 (343)
T ss_pred             --------------------------------------------------cceEEEEecCcchhcccCCCCCccCHhhhh
Confidence                                                              699999997653  44444  344443333


Q ss_pred             -ccccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcceEEcCCCCC
Q 017457          163 -LLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCG  239 (371)
Q Consensus       163 -~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~~  239 (371)
                       .+..+.+|||...++....++|++|+|-|| |++|+++.|+||.+|+ +|++++.++||.+.++. +|.+..+||++  
T Consensus       132 g~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~--  208 (343)
T KOG1196|consen  132 GLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKE--  208 (343)
T ss_pred             hccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccC--
Confidence             356689999999999999999999999987 9999999999999999 99999999999999876 79999999998  


Q ss_pred             CccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCC----CC-ceecCHHHHhcCceEEEeeccC
Q 017457          240 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH----GS-PISLNSIEILKGRSVCGTYFGG  314 (371)
Q Consensus       240 ~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~----~~-~~~~~~~~~~~~~~~~g~~~~~  314 (371)
                      +.+..+.+++..+.|+|+.||.+|+.. +...+..|+.. |+++.||..+.    .+ .+.-....+.+++++.|+...+
T Consensus       209 e~~~~~aL~r~~P~GIDiYfeNVGG~~-lDavl~nM~~~-gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d  286 (343)
T KOG1196|consen  209 ESDLSAALKRCFPEGIDIYFENVGGKM-LDAVLLNMNLH-GRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSD  286 (343)
T ss_pred             ccCHHHHHHHhCCCcceEEEeccCcHH-HHHHHHhhhhc-cceEeeeeehhccccCCccccchhhheeeeEEeeeEEeec
Confidence            238888888877779999999999988 99999999997 99999996431    11 1111122234478888876555


Q ss_pred             CCc--hhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEeC
Q 017457          315 LKP--RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMD  368 (371)
Q Consensus       315 ~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~~  368 (371)
                      +.+  .+.++.+..++++|+|+..+-+..  .|++.++||.-+.++... |.++.+.
T Consensus       287 ~~d~~~k~ld~l~~~ikegKI~y~edi~~--Glen~P~A~vglf~GkNvGKqiv~va  341 (343)
T KOG1196|consen  287 YLDKYPKFLDFLLPYIKEGKITYVEDIAD--GLENGPSALVGLFHGKNVGKQLVKVA  341 (343)
T ss_pred             hhhhhHHHHHHHHHHHhcCceEEehhHHH--HHhccHHHHHHHhccCcccceEEEee
Confidence            542  244677889999999987654433  499999999999998776 8888765

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.89  E-value=1.3e-23  Score=163.93  Aligned_cols=108  Identities=34%  Similarity=0.596  Sum_probs=95.4

Q ss_pred             CCeEEEEEeEeecccccccccccC-CCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCCCCCCccccCCCC
Q 017457           21 AWEIRIKILCTSLCHSDVTFWKSS-TDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKS   99 (371)
Q Consensus        21 ~~eVlVkv~~~~i~~~D~~~~~g~-~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~   99 (371)
                      |+||||||++++||++|+++++|. ....  .+|.++|||++|+|+++|+++++|++||+|++.+...|+.|.+|..+.+
T Consensus         1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~--~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~   78 (109)
T PF08240_consen    1 PGEVLVKVRAAGICGSDLHIREGGPPPPP--KFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRP   78 (109)
T ss_dssp             TTEEEEEEEEEEE-HHHHHHHTTSSSSTS--SSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTG
T ss_pred             CCEEEEEEEEeeeCHHHHHHHhhccccCC--CCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcc
Confidence            689999999999999999999995 3333  8999999999999999999999999999999999989999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEEC
Q 017457          100 NTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI  152 (371)
Q Consensus       100 ~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~  152 (371)
                      ++|.....   .|+..+|                   +|+||+.+++++++|+
T Consensus        79 ~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~v  109 (109)
T PF08240_consen   79 NLCPNPEV---LGLGLDG-------------------GFAEYVVVPARNLVPV  109 (109)
T ss_dssp             GGTTTBEE---TTTSSTC-------------------SSBSEEEEEGGGEEEE
T ss_pred             ccCCCCCE---eEcCCCC-------------------cccCeEEEehHHEEEC
Confidence            99987665   6776766                   9999999999999985

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.75  E-value=4.4e-17  Score=131.26  Aligned_cols=128  Identities=30%  Similarity=0.517  Sum_probs=114.5

Q ss_pred             hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHH
Q 017457          194 AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAF  272 (371)
Q Consensus       194 ~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~  272 (371)
                      ++|++++|+|+++|+ +|++++++++|++.++++|+++++++++   .++.+.+++++++ ++|+||||+|....++.++
T Consensus         1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~---~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~   76 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD---DDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAI   76 (130)
T ss_dssp             HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT---SSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHH
T ss_pred             ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc---cccccccccccccccceEEEEecCcHHHHHHHH
Confidence            589999999999997 9999999999999999999999999988   7899999999998 9999999999777799999


Q ss_pred             HHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhhHHHHHHHHHc
Q 017457          273 NSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLD  330 (371)
Q Consensus       273 ~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~  330 (371)
                      ++++++ |+++.+|... ....+++...++. ++++.|+...+   .++++++++++++
T Consensus        77 ~~l~~~-G~~v~vg~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~la~  130 (130)
T PF00107_consen   77 KLLRPG-GRIVVVGVYG-GDPISFNLMNLMFKEITIRGSWGGS---PEDFQEALQLLAQ  130 (130)
T ss_dssp             HHEEEE-EEEEEESSTS-TSEEEEEHHHHHHTTEEEEEESSGG---HHHHHHHHHHHH-
T ss_pred             HHhccC-CEEEEEEccC-CCCCCCCHHHHHhCCcEEEEEccCC---HHHHHHHHHHhcC
Confidence            999998 9999999854 4667888888766 89999997555   5789999988764

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=99.46  E-value=1.8e-12  Score=122.46  Aligned_cols=175  Identities=15%  Similarity=0.200  Sum_probs=136.0

Q ss_pred             HHHHHHcC-CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhh
Q 017457          173 GAAWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       173 ~~l~~~~~-~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~  251 (371)
                      .++.+..+ ..+|++|+|+|.|.+|+.+++.++.+|+ +|++++.++.|.+.++.+|++.+ +        ..+.+    
T Consensus       190 ~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~--------~~e~v----  255 (413)
T cd00401         190 DGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T--------MEEAV----  255 (413)
T ss_pred             HHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c--------HHHHH----
Confidence            33444333 4689999999999999999999999999 89999999999999999998533 1        11122    


Q ss_pred             CCCcCEEEECCCChHHHHHH-HHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhhHH--HHHHH
Q 017457          252 DGGADYCFECIGLTSVMNDA-FNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIA--TLAQK  327 (371)
Q Consensus       252 ~gg~d~vid~~g~~~~~~~~-~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~--~~~~~  327 (371)
                       .++|+||+++|....++.. ++.++++ |.++.+|..    ..+++...+.. .+++.++.....  ..+++  +.+.+
T Consensus       256 -~~aDVVI~atG~~~~i~~~~l~~mk~G-gilvnvG~~----~~eId~~~L~~~el~i~g~~~~~~--~~~~~~g~aI~L  327 (413)
T cd00401         256 -KEGDIFVTTTGNKDIITGEHFEQMKDG-AIVCNIGHF----DVEIDVKGLKENAVEVVNIKPQVD--RYELPDGRRIIL  327 (413)
T ss_pred             -cCCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEeCCC----CCccCHHHHHhhccEEEEccCCcc--eEEcCCcchhhh
Confidence             2689999999988877765 9999997 999999953    34677776665 788888753321  12345  79999


Q ss_pred             HHcCCC-CCCCceeEE-----Eecc-cHHHHHHHHhcCcee--eEEEEeCc
Q 017457          328 YLDKEL-NLGEFITHE-----VSFH-DINKAFDLLLEGKSL--RCIIWMDK  369 (371)
Q Consensus       328 ~~~g~~-~~~~~~~~~-----~~~~-~~~~a~~~~~~~~~~--kvvv~~~~  369 (371)
                      +++|++ ++...++|.     ++|+ |+.+++..+.++...  |+++.+++
T Consensus       328 La~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~~  378 (413)
T cd00401         328 LAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPKK  378 (413)
T ss_pred             hhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCHH
Confidence            999998 788888888     8999 999999999886653  78777654

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.28  E-value=7e-11  Score=114.53  Aligned_cols=155  Identities=18%  Similarity=0.192  Sum_probs=112.0

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceE-EcCCCCC----------CccHHHHHHH
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCG----------DKTVSQVIKE  249 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v-~~~~~~~----------~~~~~~~i~~  249 (371)
                      ..++++|+|+|+|.+|+++++.|+.+|+ +|++++.++++++.++++|++.+ ++..+.+          ..++.+..++
T Consensus       162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~  240 (509)
T PRK09424        162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA  240 (509)
T ss_pred             CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence            5689999999999999999999999999 89999999999999999999854 5543310          0123333333


Q ss_pred             h-hC--CCcCEEEECCCCh-----HH-HHHHHHHhhcCCceEEEECccCCCC-ceecCHHHHh--cCceEEEeeccCCCc
Q 017457          250 M-TD--GGADYCFECIGLT-----SV-MNDAFNSSREGWGKTVILGVEMHGS-PISLNSIEIL--KGRSVCGTYFGGLKP  317 (371)
Q Consensus       250 ~-~~--gg~d~vid~~g~~-----~~-~~~~~~~l~~~~G~~v~~g~~~~~~-~~~~~~~~~~--~~~~~~g~~~~~~~~  317 (371)
                      . +.  +++|+||+|++.+     .. .+++++.++++ |+++++|...++. ..+.+...++  +++++.|...  +. 
T Consensus       241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n--~P-  316 (509)
T PRK09424        241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTD--LP-  316 (509)
T ss_pred             HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeCC--Cc-
Confidence            3 33  2799999999863     34 49999999998 9999999743321 2344334444  4788888752  22 


Q ss_pred             hhhHHHHHHHHHcCCCCCCCcee
Q 017457          318 RSDIATLAQKYLDKELNLGEFIT  340 (371)
Q Consensus       318 ~~~~~~~~~~~~~g~~~~~~~~~  340 (371)
                      .+...++.+++.++.+.+.+.++
T Consensus       317 ~~~p~~As~lla~~~i~l~~lIt  339 (509)
T PRK09424        317 SRLPTQSSQLYGTNLVNLLKLLC  339 (509)
T ss_pred             hhHHHHHHHHHHhCCccHHHHhc
Confidence            23334588899988777665554

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=99.21  E-value=1.7e-11  Score=98.06  Aligned_cols=119  Identities=21%  Similarity=0.353  Sum_probs=77.7

Q ss_pred             hCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCC--ChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHH-hc
Q 017457          227 FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG--LTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LK  303 (371)
Q Consensus       227 lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g--~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~  303 (371)
                      ||+++++|+++   +++      ...+++|+|||++|  +...+..++++| ++ |+++.++.       ....... ..
T Consensus         1 LGAd~vidy~~---~~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~-------~~~~~~~~~~   62 (127)
T PF13602_consen    1 LGADEVIDYRD---TDF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG-------DLPSFARRLK   62 (127)
T ss_dssp             CT-SEEEETTC---SHH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S-------HHHHHHHHHH
T ss_pred             CCcCEEecCCC---ccc------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC-------cccchhhhhc
Confidence            68999999987   555      22349999999999  666447777888 97 99998873       1111111 11


Q ss_pred             CceEEEeeccCCC----chhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEE
Q 017457          304 GRSVCGTYFGGLK----PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII  365 (371)
Q Consensus       304 ~~~~~g~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv  365 (371)
                      ...+....+....    ..+.++++++++++|++.+.  +.++|||+++++|++.+.+++.. |+||
T Consensus        63 ~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~--i~~~f~l~~~~~A~~~l~~~~~~GKvVl  127 (127)
T PF13602_consen   63 GRSIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPP--IDRVFPLEEAPEAHERLESGHARGKVVL  127 (127)
T ss_dssp             CHHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred             ccceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEe--eccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence            3333333323211    13459999999999976654  88899999999999999998876 9886

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.56  E-value=6.4e-07  Score=86.96  Aligned_cols=108  Identities=20%  Similarity=0.212  Sum_probs=82.5

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceE-EcCCCC----------CCccHHHHHHHh
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATC----------GDKTVSQVIKEM  250 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v-~~~~~~----------~~~~~~~~i~~~  250 (371)
                      .++++|+|+|+|.+|+++++.|+.+|+ +|++++.++++++.++++|++.+ ++..+.          ...++.+...++
T Consensus       162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~  240 (511)
T TIGR00561       162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL  240 (511)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence            467899999999999999999999999 89999999999999999998763 332110          012344444444


Q ss_pred             hC---CCcCEEEECC---CChH---HHHHHHHHhhcCCceEEEECccCCC
Q 017457          251 TD---GGADYCFECI---GLTS---VMNDAFNSSREGWGKTVILGVEMHG  291 (371)
Q Consensus       251 ~~---gg~d~vid~~---g~~~---~~~~~~~~l~~~~G~~v~~g~~~~~  291 (371)
                      ..   .++|++|+++   |.+.   ..+..++.++++ +.+++++...++
T Consensus       241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~GG  289 (511)
T TIGR00561       241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQGG  289 (511)
T ss_pred             HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCCCC
Confidence            43   2799999999   5422   468889999998 999999875444

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=98.55  E-value=8.8e-07  Score=80.54  Aligned_cols=161  Identities=22%  Similarity=0.290  Sum_probs=98.6

Q ss_pred             HcCCCCCCeEEEEcCChHHHHHHHHHHHcCCC-eEEEEcCChhHHHHHHHh----CcceEEcCCCCCCccHHHHHHHh--
Q 017457          178 VAGVEVGSTVAIFGLGAVGLAVAEGARLNRAS-KIIGVDINPEKFEIGKKF----GITDFINPATCGDKTVSQVIKEM--  250 (371)
Q Consensus       178 ~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~-~Vi~~~~~~~~~~~~~~l----ga~~v~~~~~~~~~~~~~~i~~~--  250 (371)
                      .+.+++|++||.+|+|. |..+.++++..|.. +|++++.+++.++.+++.    +.+.+- ...   .+    +.++  
T Consensus        72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~-~~~---~d----~~~l~~  142 (272)
T PRK11873         72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVE-FRL---GE----IEALPV  142 (272)
T ss_pred             hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEE-EEE---cc----hhhCCC
Confidence            35688999999999987 88888888887753 799999999988888763    332221 111   12    1222  


Q ss_pred             hCCCcCEEEEC-C-----CChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCchhhHHHH
Q 017457          251 TDGGADYCFEC-I-----GLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATL  324 (371)
Q Consensus       251 ~~gg~d~vid~-~-----g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  324 (371)
                      ..+.||+|+.. +     .....++.+.+.|+++ |+++..+.....   .++ ..+.....+.+.......   ..+++
T Consensus       143 ~~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~---~~~e~  214 (272)
T PRK11873        143 ADNSVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVVLRG---ELP-EEIRNDAELYAGCVAGAL---QEEEY  214 (272)
T ss_pred             CCCceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEeeccC---CCC-HHHHHhHHHHhccccCCC---CHHHH
Confidence            23479999843 2     2234589999999998 999987653222   111 111222222222112221   23445


Q ss_pred             HHHHHc-CCCCCCCceeEEEecccHHHHHHHH
Q 017457          325 AQKYLD-KELNLGEFITHEVSFHDINKAFDLL  355 (371)
Q Consensus       325 ~~~~~~-g~~~~~~~~~~~~~~~~~~~a~~~~  355 (371)
                      .+++++ |...........++++++.++++.+
T Consensus       215 ~~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~  246 (272)
T PRK11873        215 LAMLAEAGFVDITIQPKREYRIPDAREFLEDW  246 (272)
T ss_pred             HHHHHHCCCCceEEEeccceecccHHHHHHHh
Confidence            555655 3333333344678899999999988

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=98.48  E-value=1.3e-08  Score=97.78  Aligned_cols=159  Identities=18%  Similarity=0.207  Sum_probs=106.8

Q ss_pred             cccccccEEEEEeCCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccC
Q 017457           55 IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLN  134 (371)
Q Consensus        55 ~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~  134 (371)
                      .-|.|.++.+.+|+++++.     .|++-+.. ||+|++|    ++.|...+.   .|...++                 
T Consensus        89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~---~g~~l~~-----------------  138 (417)
T TIGR01035        89 LTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKT---VGKVLER-----------------  138 (417)
T ss_pred             cCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCC---chHHHHH-----------------
Confidence            4689999999999998765     67777777 9999999    555555553   4444443                 


Q ss_pred             cccccceeeeecceeEE---C-CCCCCcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCe
Q 017457          135 ISSFTEYSVVDITHVVK---I-TPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASK  210 (371)
Q Consensus       135 ~g~~a~~~~v~~~~~~~---~-P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~  210 (371)
                        .|++++.+++ .+..   + +..+|...+|         ...+....+..++++|+|+|+|.+|.++++.++..|+.+
T Consensus       139 --lf~~a~~~~k-~vr~~t~i~~~~vSv~~~A---------v~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~  206 (417)
T TIGR01035       139 --LFQKAFSVGK-RVRTETDISAGAVSISSAA---------VELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGK  206 (417)
T ss_pred             --HHHHHHHHhh-hhhhhcCCCCCCcCHHHHH---------HHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCE
Confidence              8999988876 3332   2 2223322221         111223334567899999999999999999999999668


Q ss_pred             EEEEcCChhHHH-HHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCChH
Q 017457          211 IIGVDINPEKFE-IGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTS  266 (371)
Q Consensus       211 Vi~~~~~~~~~~-~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~~~  266 (371)
                      |+++.++.++.+ .++++|.. .++.     .+..+.+    . ++|+||+|++.+.
T Consensus       207 V~v~~rs~~ra~~la~~~g~~-~i~~-----~~l~~~l----~-~aDvVi~aT~s~~  252 (417)
T TIGR01035       207 ILIANRTYERAEDLAKELGGE-AVKF-----EDLEEYL----A-EADIVISSTGAPH  252 (417)
T ss_pred             EEEEeCCHHHHHHHHHHcCCe-EeeH-----HHHHHHH----h-hCCEEEECCCCCC
Confidence            999999988755 55667753 2221     1122222    1 6999999998755

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.28  E-value=1.9e-05  Score=72.53  Aligned_cols=96  Identities=17%  Similarity=0.244  Sum_probs=76.2

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  262 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~  262 (371)
                      .+++|+|+|.|.+|+++++.++.+|+ +|++.++++++.++++.+|++.+ ..         ..+.+... ++|+||+++
T Consensus       151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~---------~~l~~~l~-~aDiVI~t~  218 (296)
T PRK08306        151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL---------SELAEEVG-KIDIIFNTI  218 (296)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH---------HHHHHHhC-CCCEEEECC
Confidence            68999999999999999999999999 99999999988888888886532 11         11222222 699999999


Q ss_pred             CChHHHHHHHHHhhcCCceEEEECccCCC
Q 017457          263 GLTSVMNDAFNSSREGWGKTVILGVEMHG  291 (371)
Q Consensus       263 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~  291 (371)
                      +........++.++++ +.+++++...++
T Consensus       219 p~~~i~~~~l~~~~~g-~vIIDla~~pgg  246 (296)
T PRK08306        219 PALVLTKEVLSKMPPE-ALIIDLASKPGG  246 (296)
T ss_pred             ChhhhhHHHHHcCCCC-cEEEEEccCCCC
Confidence            8765456778889997 999999875443

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.22  E-value=1.8e-05  Score=75.48  Aligned_cols=101  Identities=19%  Similarity=0.258  Sum_probs=76.6

Q ss_pred             HHHHHHHcCCC-CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHh
Q 017457          172 VGAAWKVAGVE-VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEM  250 (371)
Q Consensus       172 ~~~l~~~~~~~-~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~  250 (371)
                      |.++.+..++. .|++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|+. +.        ++.+.+   
T Consensus       199 ~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~--------~l~eal---  265 (425)
T PRK05476        199 LDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VM--------TMEEAA---  265 (425)
T ss_pred             HHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ec--------CHHHHH---
Confidence            44333332444 89999999999999999999999999 899999988887666666754 22        121111   


Q ss_pred             hCCCcCEEEECCCChHHHH-HHHHHhhcCCceEEEECcc
Q 017457          251 TDGGADYCFECIGLTSVMN-DAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       251 ~~gg~d~vid~~g~~~~~~-~~~~~l~~~~G~~v~~g~~  288 (371)
                        .++|++++++|....+. ..+..++++ +.++..|..
T Consensus       266 --~~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~  301 (425)
T PRK05476        266 --ELGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHF  301 (425)
T ss_pred             --hCCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCC
Confidence              16899999999877665 688889997 888888864

>TIGR00936 ahcY adenosylhomocysteinase

Probab=98.14  E-value=3.5e-05  Score=73.11  Aligned_cols=92  Identities=21%  Similarity=0.303  Sum_probs=73.6

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      ...|++|+|+|.|.+|+..++.++.+|+ +|++++.++.+...+...|+. +.+        ..+.+     .+.|++|+
T Consensus       192 ~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~--------leeal-----~~aDVVIt  256 (406)
T TIGR00936       192 LIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT--------MEEAA-----KIGDIFIT  256 (406)
T ss_pred             CCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC--------HHHHH-----hcCCEEEE
Confidence            4689999999999999999999999999 899999888877777767763 321        11222     26799999


Q ss_pred             CCCChHHHH-HHHHHhhcCCceEEEECcc
Q 017457          261 CIGLTSVMN-DAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       261 ~~g~~~~~~-~~~~~l~~~~G~~v~~g~~  288 (371)
                      ++|....++ ..+..++++ +.++..|..
T Consensus       257 aTG~~~vI~~~~~~~mK~G-ailiN~G~~  284 (406)
T TIGR00936       257 ATGNKDVIRGEHFENMKDG-AIVANIGHF  284 (406)
T ss_pred             CCCCHHHHHHHHHhcCCCC-cEEEEECCC
Confidence            999888666 488889997 999988863

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=98.05  E-value=2e-07  Score=90.00  Aligned_cols=160  Identities=20%  Similarity=0.172  Sum_probs=95.8

Q ss_pred             cccccccEEEEEeCCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccC
Q 017457           55 IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLN  134 (371)
Q Consensus        55 ~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~  134 (371)
                      .-|+|.++.+.+|+++.+..-+|+     +.. ||+|+..    ++.|...+.   .|...+                  
T Consensus        91 ~~g~ea~~hl~~V~~GldS~V~GE-----~qI-lgQvk~a----~~~a~~~g~---~g~~l~------------------  139 (423)
T PRK00045         91 HEGEEAVRHLFRVASGLDSMVLGE-----PQI-LGQVKDA----YALAQEAGT---VGTILN------------------  139 (423)
T ss_pred             cCCHHHHHHHHHHHhhhhhhhcCC-----hHH-HHHHHHH----HHHHHHcCC---chHHHH------------------
Confidence            469999999999999987644444     333 5555421    222222221   121122                  


Q ss_pred             cccccceeeeecceeEECCCCCCcchhhccccchhhhHHHHHHHc---CCCCCCeEEEEcCChHHHHHHHHHHHcCCCeE
Q 017457          135 ISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVA---GVEVGSTVAIFGLGAVGLAVAEGARLNRASKI  211 (371)
Q Consensus       135 ~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~---~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~V  211 (371)
                       +.|++.+.++        +.+....+.. ..+.+.++.++....   .-.++++|+|+|+|.+|.++++.++..|+.+|
T Consensus       140 -~lf~~a~~~~--------k~v~~~t~i~-~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V  209 (423)
T PRK00045        140 -RLFQKAFSVA--------KRVRTETGIG-AGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKI  209 (423)
T ss_pred             -HHHHHHHHHH--------hhHhhhcCCC-CCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeE
Confidence             2555554443        3332222211 224444555443221   23678999999999999999999999998789


Q ss_pred             EEEcCChhHHH-HHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCChH
Q 017457          212 IGVDINPEKFE-IGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTS  266 (371)
Q Consensus       212 i~~~~~~~~~~-~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~~~  266 (371)
                      +++.++.++.+ .++.+|.+ +++.         +.+.+.. .++|+||+|++.+.
T Consensus       210 ~v~~r~~~ra~~la~~~g~~-~~~~---------~~~~~~l-~~aDvVI~aT~s~~  254 (423)
T PRK00045        210 TVANRTLERAEELAEEFGGE-AIPL---------DELPEAL-AEADIVISSTGAPH  254 (423)
T ss_pred             EEEeCCHHHHHHHHHHcCCc-EeeH---------HHHHHHh-ccCCEEEECCCCCC
Confidence            99999988755 56667753 3321         1122211 26899999998754

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=98.03  E-value=0.00012  Score=65.70  Aligned_cols=132  Identities=20%  Similarity=0.264  Sum_probs=82.0

Q ss_pred             cccceeeeecceeEECCCCCCcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcC
Q 017457          137 SFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI  216 (371)
Q Consensus       137 ~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~  216 (371)
                      +|.+|.. +...++.+++++++..+.- +.+..+ ...+.  ..+.++++||-+|+|. |.+++.+++ .|+.+|++++.
T Consensus        78 ~~~~~~~-~~~~~i~i~p~~afgtg~h-~tt~~~-l~~l~--~~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDi  150 (250)
T PRK00517         78 SWEDPPD-PDEINIELDPGMAFGTGTH-PTTRLC-LEALE--KLVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDI  150 (250)
T ss_pred             CCcCCCC-CCeEEEEECCCCccCCCCC-HHHHHH-HHHHH--hhcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEEC
Confidence            4555544 6677888988888775542 111111 11111  1256889999999987 888776555 67757999999


Q ss_pred             ChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCC--CcCEEEECCCChH---HHHHHHHHhhcCCceEEEECc
Q 017457          217 NPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG--GADYCFECIGLTS---VMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       217 ~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g--g~d~vid~~g~~~---~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      ++...+.+++.-...-+. ..   ..       +..+  .||+|+.......   .++.+.+.|+++ |.++..|.
T Consensus       151 s~~~l~~A~~n~~~~~~~-~~---~~-------~~~~~~~fD~Vvani~~~~~~~l~~~~~~~Lkpg-G~lilsgi  214 (250)
T PRK00517        151 DPQAVEAARENAELNGVE-LN---VY-------LPQGDLKADVIVANILANPLLELAPDLARLLKPG-GRLILSGI  214 (250)
T ss_pred             CHHHHHHHHHHHHHcCCC-ce---EE-------EccCCCCcCEEEEcCcHHHHHHHHHHHHHhcCCC-cEEEEEEC
Confidence            999888776532111010 00   00       1111  5899986554332   356788889998 99998765

>PLN02494 adenosylhomocysteinase

Probab=97.98  E-value=8e-05  Score=71.42  Aligned_cols=98  Identities=20%  Similarity=0.284  Sum_probs=76.5

Q ss_pred             HHHHHcC-CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhC
Q 017457          174 AAWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       174 ~l~~~~~-~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~  252 (371)
                      ++.+..+ .-.|++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|+.. +        ...+.+.    
T Consensus       243 ~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~v-v--------~leEal~----  308 (477)
T PLN02494        243 GLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQV-L--------TLEDVVS----  308 (477)
T ss_pred             HHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCee-c--------cHHHHHh----
Confidence            3444433 3679999999999999999999999999 8999998888776776677642 2        1222221    


Q ss_pred             CCcCEEEECCCChHH-HHHHHHHhhcCCceEEEECc
Q 017457          253 GGADYCFECIGLTSV-MNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       253 gg~d~vid~~g~~~~-~~~~~~~l~~~~G~~v~~g~  287 (371)
                       .+|+++.++|.... ....++.|+++ +.++.+|.
T Consensus       309 -~ADVVI~tTGt~~vI~~e~L~~MK~G-AiLiNvGr  342 (477)
T PLN02494        309 -EADIFVTTTGNKDIIMVDHMRKMKNN-AIVCNIGH  342 (477)
T ss_pred             -hCCEEEECCCCccchHHHHHhcCCCC-CEEEEcCC
Confidence             58999999998764 37899999998 99999987

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=97.98  E-value=2.4e-05  Score=72.43  Aligned_cols=109  Identities=17%  Similarity=0.184  Sum_probs=77.9

Q ss_pred             ceeEECCCCCCcchhhccccchhhhHHHHHHHcC---CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHH-H
Q 017457          147 THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAG---VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKF-E  222 (371)
Q Consensus       147 ~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~---~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~-~  222 (371)
                      ...+++|+.++.+.++... +...++.++.....   -.++++|+|+|+|.+|.++++.++..|..+|+++.+++++. +
T Consensus       139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~  217 (311)
T cd05213         139 QKAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEE  217 (311)
T ss_pred             HHHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence            3566778888888887765 56666665432221   24789999999999999999999988876899999998875 5


Q ss_pred             HHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCChHH
Q 017457          223 IGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSV  267 (371)
Q Consensus       223 ~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~~~~  267 (371)
                      .++++|+. +++.     .++.+.+     ..+|+||.+++.+..
T Consensus       218 la~~~g~~-~~~~-----~~~~~~l-----~~aDvVi~at~~~~~  251 (311)
T cd05213         218 LAKELGGN-AVPL-----DELLELL-----NEADVVISATGAPHY  251 (311)
T ss_pred             HHHHcCCe-EEeH-----HHHHHHH-----hcCCEEEECCCCCch
Confidence            66778873 3321     1122222     158999999998773

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.83  E-value=0.00023  Score=67.44  Aligned_cols=100  Identities=22%  Similarity=0.220  Sum_probs=70.6

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      ++.+|+|+|+|.+|+.+++.++.+|+ +|+++++++++.+.+.. ++.........      .+.+.+... .+|++|++
T Consensus       166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~------~~~l~~~l~-~aDvVI~a  237 (370)
T TIGR00518       166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN------AYEIEDAVK-RADLLIGA  237 (370)
T ss_pred             CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC------HHHHHHHHc-cCCEEEEc
Confidence            45669999999999999999999999 89999999888877654 45432222111      122333222 68999999


Q ss_pred             CC---C--hH-HHHHHHHHhhcCCceEEEECccCCC
Q 017457          262 IG---L--TS-VMNDAFNSSREGWGKTVILGVEMHG  291 (371)
Q Consensus       262 ~g---~--~~-~~~~~~~~l~~~~G~~v~~g~~~~~  291 (371)
                      ++   .  +. .....++.++++ +.+++++...++
T Consensus       238 ~~~~g~~~p~lit~~~l~~mk~g-~vIvDva~d~GG  272 (370)
T TIGR00518       238 VLIPGAKAPKLVSNSLVAQMKPG-AVIVDVAIDQGG  272 (370)
T ss_pred             cccCCCCCCcCcCHHHHhcCCCC-CEEEEEecCCCC
Confidence            73   2  21 236778889997 999999875443

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.82  E-value=0.00036  Score=63.68  Aligned_cols=94  Identities=16%  Similarity=0.234  Sum_probs=71.2

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  262 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~  262 (371)
                      .|++++|+|.|.+|.+.+..++.+|+ +|++..+++++.+.+.++|...+ .        + ..+.+... .+|+|++++
T Consensus       150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~--------~-~~l~~~l~-~aDiVint~  217 (287)
T TIGR02853       150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-P--------L-NKLEEKVA-EIDIVINTI  217 (287)
T ss_pred             CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-c--------H-HHHHHHhc-cCCEEEECC
Confidence            57899999999999999999999999 99999999888777776665322 1        1 11222222 689999999


Q ss_pred             CChHHHHHHHHHhhcCCceEEEECccC
Q 017457          263 GLTSVMNDAFNSSREGWGKTVILGVEM  289 (371)
Q Consensus       263 g~~~~~~~~~~~l~~~~G~~v~~g~~~  289 (371)
                      +....-...++.++++ ..+++++...
T Consensus       218 P~~ii~~~~l~~~k~~-aliIDlas~P  243 (287)
T TIGR02853       218 PALVLTADVLSKLPKH-AVIIDLASKP  243 (287)
T ss_pred             ChHHhCHHHHhcCCCC-eEEEEeCcCC
Confidence            8655335677788887 8899998643

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=97.75  E-value=0.00036  Score=67.22  Aligned_cols=92  Identities=21%  Similarity=0.263  Sum_probs=72.1

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      .-.|++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|+.. .        ++.+.+     ..+|+|+.
T Consensus       251 ~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~-~--------~leell-----~~ADIVI~  315 (476)
T PTZ00075        251 MIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQV-V--------TLEDVV-----ETADIFVT  315 (476)
T ss_pred             CcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCcee-c--------cHHHHH-----hcCCEEEE
Confidence            4579999999999999999999999999 8999988877665555556532 1        222222     16899999


Q ss_pred             CCCChHHH-HHHHHHhhcCCceEEEECcc
Q 017457          261 CIGLTSVM-NDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       261 ~~g~~~~~-~~~~~~l~~~~G~~v~~g~~  288 (371)
                      ++|....+ ...++.|+++ +.++.+|..
T Consensus       316 atGt~~iI~~e~~~~MKpG-AiLINvGr~  343 (476)
T PTZ00075        316 ATGNKDIITLEHMRRMKNN-AIVGNIGHF  343 (476)
T ss_pred             CCCcccccCHHHHhccCCC-cEEEEcCCC
Confidence            99987755 4889999998 999999864

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.69  E-value=0.00021  Score=57.62  Aligned_cols=97  Identities=21%  Similarity=0.217  Sum_probs=63.0

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhCcc--eEEcCCCCCCccHHHHHHHhhCCCcCE
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGIT--DFINPATCGDKTVSQVIKEMTDGGADY  257 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga~--~v~~~~~~~~~~~~~~i~~~~~gg~d~  257 (371)
                      --++++++|+|+|++|.+++..+...|+++|+++.|+.+|.+.+. .++..  .+++.++     +.+.+.     .+|+
T Consensus         9 ~l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~-----~~~~~~-----~~Di   78 (135)
T PF01488_consen    9 DLKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED-----LEEALQ-----EADI   78 (135)
T ss_dssp             TGTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG-----HCHHHH-----TESE
T ss_pred             CcCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH-----HHHHHh-----hCCe
Confidence            346899999999999999999999999988999999998877654 45322  2333332     221111     6999


Q ss_pred             EEECCCChHH--HHHHHHHhhcCCceEEEECc
Q 017457          258 CFECIGLTSV--MNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       258 vid~~g~~~~--~~~~~~~l~~~~G~~v~~g~  287 (371)
                      +|+|++.+..  ....+......-+.+++++.
T Consensus        79 vI~aT~~~~~~i~~~~~~~~~~~~~~v~Dla~  110 (135)
T PF01488_consen   79 VINATPSGMPIITEEMLKKASKKLRLVIDLAV  110 (135)
T ss_dssp             EEE-SSTTSTSSTHHHHTTTCHHCSEEEES-S
T ss_pred             EEEecCCCCcccCHHHHHHHHhhhhceecccc
Confidence            9999887641  12222222221036777764

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK08324 short chain dehydrogenase; Validated

Probab=97.66  E-value=0.00042  Score=71.32  Aligned_cols=137  Identities=20%  Similarity=0.231  Sum_probs=85.3

Q ss_pred             cccceeeeecceeEECCCCCCcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc
Q 017457          137 SFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVD  215 (371)
Q Consensus       137 ~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~  215 (371)
                      ++++|..+++..++.+ +..+++++......          .....+|+++||+|+ |++|.+.++.+...|+ +|++++
T Consensus       386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~~----------~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~  453 (681)
T PRK08324        386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQRMP----------KPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLAD  453 (681)
T ss_pred             hcCCccCCChhhhcce-eeehhhhhhhhcCC----------CCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEe
Confidence            4567777776666666 55555555421100          122346899999997 9999999999999999 899999


Q ss_pred             CChhHHHHHHH-hCc--c-eE--EcCCCCCCccHHHHHHHhh--CCCcCEEEECCCC-----------------------
Q 017457          216 INPEKFEIGKK-FGI--T-DF--INPATCGDKTVSQVIKEMT--DGGADYCFECIGL-----------------------  264 (371)
Q Consensus       216 ~~~~~~~~~~~-lga--~-~v--~~~~~~~~~~~~~~i~~~~--~gg~d~vid~~g~-----------------------  264 (371)
                      ++.++.+.+.+ ++.  . .+  .|-.+  .....+.+.+..  .+++|++|++.|.                       
T Consensus       454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd--~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~  531 (681)
T PRK08324        454 LDEEAAEAAAAELGGPDRALGVACDVTD--EAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNAT  531 (681)
T ss_pred             CCHHHHHHHHHHHhccCcEEEEEecCCC--HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            99887665433 432  1 11  23222  122222233322  2379999999982                       


Q ss_pred             --hHHHHHHHHHhhc---CCceEEEECcc
Q 017457          265 --TSVMNDAFNSSRE---GWGKTVILGVE  288 (371)
Q Consensus       265 --~~~~~~~~~~l~~---~~G~~v~~g~~  288 (371)
                        ...++.+++.++.   + |+++.++..
T Consensus       532 g~~~l~~~~~~~l~~~~~~-g~iV~vsS~  559 (681)
T PRK08324        532 GHFLVAREAVRIMKAQGLG-GSIVFIASK  559 (681)
T ss_pred             HHHHHHHHHHHHHHhcCCC-cEEEEECCc
Confidence              1123445666655   5 789998863

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=97.47  E-value=0.00049  Score=58.79  Aligned_cols=118  Identities=18%  Similarity=0.199  Sum_probs=80.7

Q ss_pred             CCcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh----HHHHHHHhCcce
Q 017457          156 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE----KFEIGKKFGITD  231 (371)
Q Consensus       156 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~----~~~~~~~lga~~  231 (371)
                      ++....-.++-+...|.  +.....++++++||=+|+|. |..++-+|+..|  +|+.+++.++    .++.++.+|...
T Consensus        47 lpi~~gqtis~P~~vA~--m~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~n  121 (209)
T COG2518          47 LPIGCGQTISAPHMVAR--MLQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYEN  121 (209)
T ss_pred             ccCCCCceecCcHHHHH--HHHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCc
Confidence            33333334444445443  45677899999999999987 999999999988  7999998887    444456688754


Q ss_pred             EEcCCCCCCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEEC
Q 017457          232 FINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       232 v~~~~~~~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      |.-...    |-   ..-+... .||.++-+.+-+..-..+++.|+++ |+++.--
T Consensus       122 V~v~~g----DG---~~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~Pv  169 (209)
T COG2518         122 VTVRHG----DG---SKGWPEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIPV  169 (209)
T ss_pred             eEEEEC----Cc---ccCCCCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEEE
Confidence            432222    11   1122333 7999987666666468899999998 9887663

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=97.46  E-value=0.00022  Score=71.79  Aligned_cols=81  Identities=21%  Similarity=0.265  Sum_probs=59.0

Q ss_pred             CCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC---------------------hhHHHHHHHhCcceEEcCCCC
Q 017457          180 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN---------------------PEKFEIGKKFGITDFINPATC  238 (371)
Q Consensus       180 ~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~---------------------~~~~~~~~~lga~~v~~~~~~  238 (371)
                      ...+|++|+|+|+|+.|+++++.++..|+ +|++++..                     ..+++.++++|++..++....
T Consensus       133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~  211 (564)
T PRK12771        133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG  211 (564)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence            36789999999999999999999999999 79888742                     346677888998876654220


Q ss_pred             CCccHHHHHHHhhCCCcCEEEECCCChH
Q 017457          239 GDKTVSQVIKEMTDGGADYCFECIGLTS  266 (371)
Q Consensus       239 ~~~~~~~~i~~~~~gg~d~vid~~g~~~  266 (371)
                      .+... +.+    ..++|+||.++|...
T Consensus       212 ~~~~~-~~~----~~~~D~Vi~AtG~~~  234 (564)
T PRK12771        212 EDITL-EQL----EGEFDAVFVAIGAQL  234 (564)
T ss_pred             CcCCH-HHH----HhhCCEEEEeeCCCC
Confidence            00111 111    126999999999754

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=97.43  E-value=0.0015  Score=59.86  Aligned_cols=96  Identities=20%  Similarity=0.279  Sum_probs=63.4

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh----Ccc-eEEcCCCCCCccHHHHHHHhhCCCc
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GIT-DFINPATCGDKTVSQVIKEMTDGGA  255 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l----ga~-~v~~~~~~~~~~~~~~i~~~~~gg~  255 (371)
                      ..++++||-+|+|. |.+++.+++ .|+.+|++++.++...+.+++.    +.. .+.....    +    ......++|
T Consensus       157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~----~----~~~~~~~~f  226 (288)
T TIGR00406       157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI----Y----LEQPIEGKA  226 (288)
T ss_pred             cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec----c----cccccCCCc
Confidence            46789999999987 877777665 5766999999999887777652    221 1111111    1    111223489


Q ss_pred             CEEEECCCCh---HHHHHHHHHhhcCCceEEEECc
Q 017457          256 DYCFECIGLT---SVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       256 d~vid~~g~~---~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      |+|+......   ..+..+.+.|+++ |.++..|.
T Consensus       227 DlVvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi  260 (288)
T TIGR00406       227 DVIVANILAEVIKELYPQFSRLVKPG-GWLILSGI  260 (288)
T ss_pred             eEEEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeC
Confidence            9998644332   2356778899998 99988775

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.41  E-value=0.0028  Score=56.04  Aligned_cols=104  Identities=22%  Similarity=0.258  Sum_probs=66.6

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHh---CcceEEcCCCCCCccHHHHHHHhhC--CCc
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKF---GITDFINPATCGDKTVSQVIKEMTD--GGA  255 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~l---ga~~v~~~~~~~~~~~~~~i~~~~~--gg~  255 (371)
                      ++++|||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ +++   +..+.+..+-.+.....+.+.+...  +++
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   82 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI   82 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4689999998 9999999999999999 999999998877655 222   2222332211011222222222211  268


Q ss_pred             CEEEECCCCh-----------------------HHHHHHHHHhhcCCceEEEECcc
Q 017457          256 DYCFECIGLT-----------------------SVMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       256 d~vid~~g~~-----------------------~~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      |.++.+.+..                       ..++..++.+..+ |+++.++..
T Consensus        83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~  137 (238)
T PRK05786         83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSM  137 (238)
T ss_pred             CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecc
Confidence            9999887642                       1144556667776 889988864

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=97.34  E-value=0.0014  Score=57.20  Aligned_cols=79  Identities=20%  Similarity=0.250  Sum_probs=59.5

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhCc----ceEEcCCCCCCccHHHHHHHhhCC--C
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGI----TDFINPATCGDKTVSQVIKEMTDG--G  254 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga----~~v~~~~~~~~~~~~~~i~~~~~g--g  254 (371)
                      +++.++|+|+ +++|.+.+......|+ +|+.+.+..++++.+. +++.    ...+|-.+  .......+..+...  .
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD--~~~~~~~i~~~~~~~g~   81 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTD--RAAVEAAIEALPEEFGR   81 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCC--HHHHHHHHHHHHHhhCc
Confidence            4588999998 9999999999999999 9999999999998865 4772    23344333  13444455555555  6


Q ss_pred             cCEEEECCCC
Q 017457          255 ADYCFECIGL  264 (371)
Q Consensus       255 ~d~vid~~g~  264 (371)
                      +|+.+|..|-
T Consensus        82 iDiLvNNAGl   91 (246)
T COG4221          82 IDILVNNAGL   91 (246)
T ss_pred             ccEEEecCCC
Confidence            9999998885

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=97.34  E-value=0.0063  Score=55.57  Aligned_cols=110  Identities=9%  Similarity=0.080  Sum_probs=75.0

Q ss_pred             chhhhHHHHHHHcC---CCCCCeEEEEcC-ChHHHHHHHHHH-HcCCCeEEEEcCChhHHHHHHHhCc-ceEEcCCCCCC
Q 017457          167 GVSTGVGAAWKVAG---VEVGSTVAIFGL-GAVGLAVAEGAR-LNRASKIIGVDINPEKFEIGKKFGI-TDFINPATCGD  240 (371)
Q Consensus       167 ~~~ta~~~l~~~~~---~~~g~~VLI~G~-g~~G~~ai~la~-~~g~~~Vi~~~~~~~~~~~~~~lga-~~v~~~~~~~~  240 (371)
                      -+.|.|. +.....   .-..+.|+|.+| +-+++..+.+++ ..+..+++++. |+.+.++.+.+|. +.|+.|++   
T Consensus       117 Lf~Tsfl-l~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglT-S~~N~~Fve~lg~Yd~V~~Yd~---  191 (314)
T PF11017_consen  117 LFITSFL-LDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLT-SARNVAFVESLGCYDEVLTYDD---  191 (314)
T ss_pred             HHHHHHH-HHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEe-cCcchhhhhccCCceEEeehhh---
Confidence            5556664 333322   334467788877 778888777777 45554899988 5566678899996 78888766   


Q ss_pred             ccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECc
Q 017457          241 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       241 ~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                            +..+....--+++|+.|+......+.+.+...--..+.+|.
T Consensus       192 ------i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~  232 (314)
T PF11017_consen  192 ------IDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGA  232 (314)
T ss_pred             ------hhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEc
Confidence                  33333335567889999998778888888775235666775

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=97.28  E-value=0.0042  Score=53.56  Aligned_cols=102  Identities=19%  Similarity=0.341  Sum_probs=68.9

Q ss_pred             HHcCCCCCCeEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHH----HhC-cceEEcCCCCCCccHHHHHHHh
Q 017457          177 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGK----KFG-ITDFINPATCGDKTVSQVIKEM  250 (371)
Q Consensus       177 ~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~----~lg-a~~v~~~~~~~~~~~~~~i~~~  250 (371)
                      ....+.++++||.+|+|. |.+++.+|+..+. .+|++++.+++..+.++    .+| .+.+....    .+..+.+...
T Consensus        34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~----~d~~~~l~~~  108 (198)
T PRK00377         34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK----GEAPEILFTI  108 (198)
T ss_pred             HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE----echhhhHhhc
Confidence            456788999999999988 8899999887642 38999999998877654    355 23221111    1222222222


Q ss_pred             hCCCcCEEEECCCC---hHHHHHHHHHhhcCCceEEEE
Q 017457          251 TDGGADYCFECIGL---TSVMNDAFNSSREGWGKTVIL  285 (371)
Q Consensus       251 ~~gg~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~  285 (371)
                       .+.+|.||...+.   ...++.+.+.|+++ |+++..
T Consensus       109 -~~~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~  144 (198)
T PRK00377        109 -NEKFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVID  144 (198)
T ss_pred             -CCCCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEEE
Confidence             2379999975542   33477888899997 998753

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=97.22  E-value=0.005  Score=58.04  Aligned_cols=97  Identities=14%  Similarity=0.080  Sum_probs=70.6

Q ss_pred             CeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhC---c-ceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG---I-TDFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lg---a-~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      .+|||+|+|.+|+.+++.+.+.|..+|++++++.++.+.+....   . ...+|-.+      .+.+.++.. ++|+||+
T Consensus         2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d------~~al~~li~-~~d~VIn   74 (389)
T COG1748           2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD------VDALVALIK-DFDLVIN   74 (389)
T ss_pred             CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC------hHHHHHHHh-cCCEEEE
Confidence            57999999999999999988888449999999999999887653   2 23444333      223333333 5699999


Q ss_pred             CCCChHHHHHHHHHhhcCCceEEEECccC
Q 017457          261 CIGLTSVMNDAFNSSREGWGKTVILGVEM  289 (371)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  289 (371)
                      +.+....++.+-.|++.+ =.+++.+...
T Consensus        75 ~~p~~~~~~i~ka~i~~g-v~yvDts~~~  102 (389)
T COG1748          75 AAPPFVDLTILKACIKTG-VDYVDTSYYE  102 (389)
T ss_pred             eCCchhhHHHHHHHHHhC-CCEEEcccCC
Confidence            999888665555677775 6777776643

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=97.21  E-value=0.0048  Score=51.71  Aligned_cols=103  Identities=17%  Similarity=0.303  Sum_probs=70.6

Q ss_pred             HHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcceEEcCCCCCCccHHHHHHHhhC
Q 017457          177 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITDFINPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       177 ~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~~v~~~~~~~~~~~~~~i~~~~~  252 (371)
                      ...++++|+.++=+|+|. |..++++|+..-..+||++++++++.+..+    ++|.+.+.--+.    +-.+.+.++. 
T Consensus        28 s~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g----~Ap~~L~~~~-  101 (187)
T COG2242          28 SKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEG----DAPEALPDLP-  101 (187)
T ss_pred             HhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEec----cchHhhcCCC-
Confidence            346789999888889866 777888885544459999999999877764    488764322222    2233333221 


Q ss_pred             CCcCEEEECCCC--hHHHHHHHHHhhcCCceEEEECc
Q 017457          253 GGADYCFECIGL--TSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       253 gg~d~vid~~g~--~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                       .+|.+|-.-|.  ...++.+|..|+++ |++|.-..
T Consensus       102 -~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~nai  136 (187)
T COG2242         102 -SPDAIFIGGGGNIEEILEAAWERLKPG-GRLVANAI  136 (187)
T ss_pred             -CCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEEee
Confidence             68999854443  23588999999998 99887654

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=97.15  E-value=0.0027  Score=53.74  Aligned_cols=77  Identities=21%  Similarity=0.226  Sum_probs=55.9

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCc---ceEEcCCCCCCcc----HHHHHHHhhCCC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI---TDFINPATCGDKT----VSQVIKEMTDGG  254 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga---~~v~~~~~~~~~~----~~~~i~~~~~gg  254 (371)
                      .|.+|||+|+ +++|++.++--..+|- +||++.+++++++.++..-.   ..+.|-.+   .+    +++++.+-.+ .
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d---~~~~~~lvewLkk~~P-~   78 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVAD---RDSRRELVEWLKKEYP-N   78 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccc---hhhHHHHHHHHHhhCC-c
Confidence            4789999976 8999998888888898 99999999999999877432   33444333   33    3333333222 6


Q ss_pred             cCEEEECCCC
Q 017457          255 ADYCFECIGL  264 (371)
Q Consensus       255 ~d~vid~~g~  264 (371)
                      .++++|+.|-
T Consensus        79 lNvliNNAGI   88 (245)
T COG3967          79 LNVLINNAGI   88 (245)
T ss_pred             hheeeecccc
Confidence            7999998883

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=97.12  E-value=0.0038  Score=59.48  Aligned_cols=109  Identities=13%  Similarity=0.148  Sum_probs=73.4

Q ss_pred             chhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHH
Q 017457          167 GVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV  246 (371)
Q Consensus       167 ~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~  246 (371)
                      +-...+..+....++++|++||-+|+|. |.++..+++..|+ +|++++.+++..+.+++.....-++...   .++   
T Consensus       151 Aq~~k~~~l~~~l~l~~g~rVLDIGcG~-G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~---~D~---  222 (383)
T PRK11705        151 AQEAKLDLICRKLQLKPGMRVLDIGCGW-GGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRL---QDY---  222 (383)
T ss_pred             HHHHHHHHHHHHhCCCCCCEEEEeCCCc-cHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEE---Cch---
Confidence            3333444455667889999999999864 7778888988898 9999999999998887643211111111   122   


Q ss_pred             HHHhhCCCcCEEEEC-----CCC---hHHHHHHHHHhhcCCceEEEEC
Q 017457          247 IKEMTDGGADYCFEC-----IGL---TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       247 i~~~~~gg~d~vid~-----~g~---~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                       .++ .+.+|.|+..     ++.   ...++.+.+.|+|+ |.++...
T Consensus       223 -~~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~  267 (383)
T PRK11705        223 -RDL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHT  267 (383)
T ss_pred             -hhc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence             112 3479988743     333   23478888999998 9887754

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=97.09  E-value=0.0044  Score=55.41  Aligned_cols=82  Identities=20%  Similarity=0.243  Sum_probs=57.2

Q ss_pred             CCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hC----cc-eEEcCCCCCCccHHHHHH-HhhC
Q 017457          181 VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FG----IT-DFINPATCGDKTVSQVIK-EMTD  252 (371)
Q Consensus       181 ~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lg----a~-~v~~~~~~~~~~~~~~i~-~~~~  252 (371)
                      ...++++||+|| +++|...+..+...|. +++.+.|+.+|++.+.+ +.    .. .++.-+- .+.+-.+.+. ++..
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DL-s~~~~~~~l~~~l~~   80 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADL-SDPEALERLEDELKE   80 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcC-CChhHHHHHHHHHHh
Confidence            356789999998 9999999999989999 99999999999888754 32    21 2332221 1133333333 3333


Q ss_pred             C--CcCEEEECCCC
Q 017457          253 G--GADYCFECIGL  264 (371)
Q Consensus       253 g--g~d~vid~~g~  264 (371)
                      .  .+|+.+|+.|-
T Consensus        81 ~~~~IdvLVNNAG~   94 (265)
T COG0300          81 RGGPIDVLVNNAGF   94 (265)
T ss_pred             cCCcccEEEECCCc
Confidence            2  78999999884

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.04  E-value=0.0055  Score=51.86  Aligned_cols=91  Identities=25%  Similarity=0.381  Sum_probs=63.8

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      --.|++|.|+|.|.+|...+++++..|+ +|++.+++....+.....+.. .        .++.+.+.     ..|+|+.
T Consensus        33 ~l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~-~--------~~l~ell~-----~aDiv~~   97 (178)
T PF02826_consen   33 ELRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVE-Y--------VSLDELLA-----QADIVSL   97 (178)
T ss_dssp             -STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEE-E--------SSHHHHHH-----H-SEEEE
T ss_pred             ccCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhcccccce-e--------eehhhhcc-----hhhhhhh
Confidence            4568999999999999999999999999 999999988766644445542 1        23333333     4799988


Q ss_pred             CCCChH-----HHHHHHHHhhcCCceEEEECc
Q 017457          261 CIGLTS-----VMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       261 ~~g~~~-----~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      +.+...     .-...+..|+++ ..+|.++.
T Consensus        98 ~~plt~~T~~li~~~~l~~mk~g-a~lvN~aR  128 (178)
T PF02826_consen   98 HLPLTPETRGLINAEFLAKMKPG-AVLVNVAR  128 (178)
T ss_dssp             -SSSSTTTTTSBSHHHHHTSTTT-EEEEESSS
T ss_pred             hhccccccceeeeeeeeeccccc-eEEEeccc
Confidence            776311     235778889987 88887764

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK05993 short chain dehydrogenase; Provisional

Probab=96.98  E-value=0.0055  Score=55.70  Aligned_cols=78  Identities=14%  Similarity=0.254  Sum_probs=55.1

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceE-EcCCCCCCccHHHHHHH---hhCCCcCE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKE---MTDGGADY  257 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~---~~~gg~d~  257 (371)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+.+...+ .|..+  ..+..+.+.+   ..++.+|+
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~~~g~id~   79 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAE--PESIAALVAQVLELSGGRLDA   79 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCC--HHHHHHHHHHHHHHcCCCccE
Confidence            4678999998 9999999988888999 99999999888887766665433 23322  1222222222   23347899


Q ss_pred             EEECCC
Q 017457          258 CFECIG  263 (371)
Q Consensus       258 vid~~g  263 (371)
                      ++++.|
T Consensus        80 li~~Ag   85 (277)
T PRK05993         80 LFNNGA   85 (277)
T ss_pred             EEECCC
Confidence            999876

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.95  E-value=0.0081  Score=55.69  Aligned_cols=102  Identities=24%  Similarity=0.337  Sum_probs=70.3

Q ss_pred             HHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHH----HhCcceEEcCCCCCCccHHHHHHHh
Q 017457          176 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGK----KFGITDFINPATCGDKTVSQVIKEM  250 (371)
Q Consensus       176 ~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~----~lga~~v~~~~~~~~~~~~~~i~~~  250 (371)
                      .....++++++||.+|+|. |..++.+++..+. ..|++++.+++..+.++    +.|.+.+....    .+..+.... 
T Consensus        73 l~~L~i~~g~~VLDIG~Gt-G~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~----gD~~~~~~~-  146 (322)
T PRK13943         73 MEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC----GDGYYGVPE-  146 (322)
T ss_pred             HHhcCCCCCCEEEEEeCCc-cHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe----CChhhcccc-
Confidence            3456788999999999974 9999999998764 26999999988665554    35655432211    122221111 


Q ss_pred             hCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEE
Q 017457          251 TDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL  285 (371)
Q Consensus       251 ~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~  285 (371)
                       .+.+|+|+.+.+-.......++.|+++ |+++..
T Consensus       147 -~~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv~  179 (322)
T PRK13943        147 -FAPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP  179 (322)
T ss_pred             -cCCccEEEECCchHHhHHHHHHhcCCC-CEEEEE
Confidence             126999998877666566788999998 987763

>PRK07326 short chain dehydrogenase; Provisional

Probab=96.95  E-value=0.016  Score=51.05  Aligned_cols=81  Identities=17%  Similarity=0.232  Sum_probs=51.5

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhCc---ceEEcCCCCCCccHHHHHHHhhC--CCc
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGI---TDFINPATCGDKTVSQVIKEMTD--GGA  255 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga---~~v~~~~~~~~~~~~~~i~~~~~--gg~  255 (371)
                      .++++||+|+ |.+|...++.+...|+ +|+++++++++.+.+. ++..   -+.+..+-.+..++.+.+.+...  +++
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL   83 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999998 9999999888888899 8999999887665443 3321   12222111011233333333322  378


Q ss_pred             CEEEECCCC
Q 017457          256 DYCFECIGL  264 (371)
Q Consensus       256 d~vid~~g~  264 (371)
                      |++|++.+.
T Consensus        84 d~vi~~ag~   92 (237)
T PRK07326         84 DVLIANAGV   92 (237)
T ss_pred             CEEEECCCC
Confidence            999998763

>PRK12742 oxidoreductase; Provisional

Probab=96.94  E-value=0.026  Score=49.72  Aligned_cols=100  Identities=21%  Similarity=0.293  Sum_probs=61.5

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHHHH-HHhCcceE-EcCCCCCCccHHHHHHHhhCCCcCEE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIG-KKFGITDF-INPATCGDKTVSQVIKEMTDGGADYC  258 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~-~~~~~~~~-~~lga~~v-~~~~~~~~~~~~~~i~~~~~gg~d~v  258 (371)
                      +++++||+|+ |++|.+.++.+...|+ +|+.+.+ ++++.+.+ .+++...+ .|..+  ...+.+.+.+  .+++|++
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~--~~~~~~~~~~--~~~id~l   79 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSAD--RDAVIDVVRK--SGALDIL   79 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCC--HHHHHHHHHH--hCCCcEE
Confidence            4789999998 9999999999988999 7877654 44544443 44555432 23222  1122222222  1368999


Q ss_pred             EECCCChH-------------------------HHHHHHHHhhcCCceEEEECcc
Q 017457          259 FECIGLTS-------------------------VMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       259 id~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      +++.|...                         ....+.+.++.. |+++.++..
T Consensus        80 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-g~iv~isS~  133 (237)
T PRK12742         80 VVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEG-GRIIIIGSV  133 (237)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcC-CeEEEEecc
Confidence            99877421                         013444556666 899988763

>PRK05693 short chain dehydrogenase; Provisional

Probab=96.93  E-value=0.0051  Score=55.74  Aligned_cols=76  Identities=20%  Similarity=0.309  Sum_probs=53.7

Q ss_pred             CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceE-EcCCCCCCccHHHHHHHhhC--CCcCEEEE
Q 017457          185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMTD--GGADYCFE  260 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~--gg~d~vid  260 (371)
                      +++||+|+ |++|...++.+...|+ +|++++++.++.+.+...+...+ .|..+  .+.+.+.+.....  +++|++++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~id~vi~   78 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVND--GAALARLAEELEAEHGGLDVLIN   78 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCEEEE
Confidence            57999998 9999999999988999 99999998887777665554433 34332  1233333333322  37999999


Q ss_pred             CCC
Q 017457          261 CIG  263 (371)
Q Consensus       261 ~~g  263 (371)
                      +.|
T Consensus        79 ~ag   81 (274)
T PRK05693         79 NAG   81 (274)
T ss_pred             CCC
Confidence            887

>PRK08177 short chain dehydrogenase; Provisional

Probab=96.90  E-value=0.0055  Score=53.76  Aligned_cols=77  Identities=13%  Similarity=0.169  Sum_probs=51.7

Q ss_pred             CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEE--cCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI--NPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~--~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      ++++|+|+ |++|...+..+...|+ +|+++++++++.+.+++++...++  |-.+  .++..+.+..+..+++|+++.+
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~id~vi~~   78 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMND--PASLDQLLQRLQGQRFDLLFVN   78 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCC--HHHHHHHHHHhhcCCCCEEEEc
Confidence            57999998 9999998888888899 999999988777666554422222  2222  1223333333333479999987


Q ss_pred             CCC
Q 017457          262 IGL  264 (371)
Q Consensus       262 ~g~  264 (371)
                      .|.
T Consensus        79 ag~   81 (225)
T PRK08177         79 AGI   81 (225)
T ss_pred             Ccc
Confidence            753

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=96.90  E-value=0.021  Score=56.65  Aligned_cols=105  Identities=11%  Similarity=0.112  Sum_probs=66.9

Q ss_pred             HcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-h--------Cc-----ceEEcCCCCCCcc
Q 017457          178 VAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F--------GI-----TDFINPATCGDKT  242 (371)
Q Consensus       178 ~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l--------ga-----~~v~~~~~~~~~~  242 (371)
                      ..+.+.|++|||+|+ |.+|...++.+...|+ +|+++.++.++.+.+.+ +        |.     ..++..+-   .+
T Consensus        74 ~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDL---tD  149 (576)
T PLN03209         74 ELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDL---EK  149 (576)
T ss_pred             ccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecC---CC
Confidence            455778999999998 9999999999988999 89999998887654422 1        21     11221111   12


Q ss_pred             HHHHHHHhhCCCcCEEEECCCChH---------------HHHHHHHHhhcC-CceEEEECcc
Q 017457          243 VSQVIKEMTDGGADYCFECIGLTS---------------VMNDAFNSSREG-WGKTVILGVE  288 (371)
Q Consensus       243 ~~~~i~~~~~gg~d~vid~~g~~~---------------~~~~~~~~l~~~-~G~~v~~g~~  288 (371)
                      . +.+.+.. +++|+||++.|...               ....+++.+... .++||.++..
T Consensus       150 ~-esI~~aL-ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSi  209 (576)
T PLN03209        150 P-DQIGPAL-GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSL  209 (576)
T ss_pred             H-HHHHHHh-cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccc
Confidence            2 2333333 37999999987431               123344444432 2689988764

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.87  E-value=0.01  Score=50.58  Aligned_cols=81  Identities=22%  Similarity=0.236  Sum_probs=58.9

Q ss_pred             CCCeEEEEcC--ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhCcc-eEEcCCC-CCCccHHHHHHHhhCCCcCE
Q 017457          183 VGSTVAIFGL--GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGIT-DFINPAT-CGDKTVSQVIKEMTDGGADY  257 (371)
Q Consensus       183 ~g~~VLI~G~--g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga~-~v~~~~~-~~~~~~~~~i~~~~~gg~d~  257 (371)
                      ..+.|||+|+  |++|.+.+.-....|+ .|+++.+.-+++..+. ++|.. .-+|-.+ .....+..++++.+.|+.|+
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~   84 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL   84 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence            4578999974  9999998888888999 9999999999988876 67742 2344322 11223455566667778999


Q ss_pred             EEECCCC
Q 017457          258 CFECIGL  264 (371)
Q Consensus       258 vid~~g~  264 (371)
                      .+|..|-
T Consensus        85 L~NNAG~   91 (289)
T KOG1209|consen   85 LYNNAGQ   91 (289)
T ss_pred             EEcCCCC
Confidence            9987774

>PRK06182 short chain dehydrogenase; Validated

Probab=96.87  E-value=0.0063  Score=55.12  Aligned_cols=79  Identities=14%  Similarity=0.259  Sum_probs=54.8

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceE-EcCCCCCCccHHHHHHHhh--CCCcCEE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMT--DGGADYC  258 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~--~gg~d~v  258 (371)
                      ++++++|+|+ |++|...++.+...|+ +|+++++++++.+.+...+...+ .|-.+  .+++.+.+.+..  .+++|++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~~~id~l   78 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTD--EASIKAAVDTIIAEEGRIDVL   78 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCEE
Confidence            4678999998 9999999998888999 99999999887766655454322 23222  123333333332  2379999


Q ss_pred             EECCCC
Q 017457          259 FECIGL  264 (371)
Q Consensus       259 id~~g~  264 (371)
                      +++.|.
T Consensus        79 i~~ag~   84 (273)
T PRK06182         79 VNNAGY   84 (273)
T ss_pred             EECCCc
Confidence            998873

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=96.87  E-value=0.024  Score=47.87  Aligned_cols=91  Identities=21%  Similarity=0.294  Sum_probs=64.7

Q ss_pred             EEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCC-
Q 017457          187 VAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL-  264 (371)
Q Consensus       187 VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~-  264 (371)
                      |+|+|+ |.+|...++.+...|. +|+++.+++++.+.  ..+.+.+. .+-   .+. +.+.+... ++|.||++.+. 
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~~~~-~d~---~d~-~~~~~al~-~~d~vi~~~~~~   71 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVEIIQ-GDL---FDP-DSVKAALK-GADAVIHAAGPP   71 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEEEEE-SCT---TCH-HHHHHHHT-TSSEEEECCHST
T ss_pred             eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccccce-eee---hhh-hhhhhhhh-hcchhhhhhhhh
Confidence            789998 9999999999999998 99999999998777  44444332 222   222 33444333 79999999984 


Q ss_pred             ---hHHHHHHHHHhhcCCc--eEEEECc
Q 017457          265 ---TSVMNDAFNSSREGWG--KTVILGV  287 (371)
Q Consensus       265 ---~~~~~~~~~~l~~~~G--~~v~~g~  287 (371)
                         ......+++.++.. |  +++.++.
T Consensus        72 ~~~~~~~~~~~~a~~~~-~~~~~v~~s~   98 (183)
T PF13460_consen   72 PKDVDAAKNIIEAAKKA-GVKRVVYLSS   98 (183)
T ss_dssp             TTHHHHHHHHHHHHHHT-TSSEEEEEEE
T ss_pred             ccccccccccccccccc-ccccceeeec
Confidence               23366777777664 4  7777664

...

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=96.85  E-value=0.0042  Score=52.03  Aligned_cols=105  Identities=19%  Similarity=0.139  Sum_probs=67.8

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEc-CCCC-C------------CccHHHHHH
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN-PATC-G------------DKTVSQVIK  248 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~-~~~~-~------------~~~~~~~i~  248 (371)
                      +..+|+|+|+|.+|+.|+.+++.+|+ +|+..+...++.+..+..+...+.. .... .            .......+.
T Consensus        19 ~p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~   97 (168)
T PF01262_consen   19 PPAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA   97 (168)
T ss_dssp             -T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred             CCeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence            34789999999999999999999999 9999999999888888877654422 1110 0            012222333


Q ss_pred             HhhCCCcCEEEECC--CC---hH-HHHHHHHHhhcCCceEEEECccCC
Q 017457          249 EMTDGGADYCFECI--GL---TS-VMNDAFNSSREGWGKTVILGVEMH  290 (371)
Q Consensus       249 ~~~~gg~d~vid~~--g~---~~-~~~~~~~~l~~~~G~~v~~g~~~~  290 (371)
                      +... .+|++|.+.  .+   +. ..+..++.|+++ ..+++++...+
T Consensus        98 ~~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~D~g  143 (168)
T PF01262_consen   98 EFIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISCDQG  143 (168)
T ss_dssp             HHHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTGGGT
T ss_pred             HHHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEecCC
Confidence            3222 578888532  11   11 246778889987 88999986443

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK08265 short chain dehydrogenase; Provisional

Probab=96.85  E-value=0.018  Score=51.76  Aligned_cols=79  Identities=20%  Similarity=0.272  Sum_probs=52.5

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCcc-eEE--cCCCCCCccHHHHHHHhhC--CCc
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGIT-DFI--NPATCGDKTVSQVIKEMTD--GGA  255 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~-~v~--~~~~~~~~~~~~~i~~~~~--gg~  255 (371)
                      +++++||+|+ |++|.+.+..+...|+ +|++++++.++.+.+ ++++.. .++  |-.+  .++..+.+.....  +.+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~i   81 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITD--DAAIERAVATVVARFGRV   81 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCC--HHHHHHHHHHHHHHhCCC
Confidence            4789999998 9999999999888999 999999988765554 334432 122  3222  1233333333221  368


Q ss_pred             CEEEECCCC
Q 017457          256 DYCFECIGL  264 (371)
Q Consensus       256 d~vid~~g~  264 (371)
                      |+++++.|.
T Consensus        82 d~lv~~ag~   90 (261)
T PRK08265         82 DILVNLACT   90 (261)
T ss_pred             CEEEECCCC
Confidence            999998773

>TIGR00438 rrmJ cell division protein FtsJ

Probab=96.84  E-value=0.017  Score=49.27  Aligned_cols=101  Identities=18%  Similarity=0.195  Sum_probs=62.2

Q ss_pred             HcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceE-EcCCCCCCccHHHHHHHhhCC-Cc
Q 017457          178 VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMTDG-GA  255 (371)
Q Consensus       178 ~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~g-g~  255 (371)
                      ...+++|++||.+|+|.-+.+.....+..+..+|++++.++.+    ...++..+ .|..+   ....+.+.+..+. ++
T Consensus        27 ~~~i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~---~~~~~~l~~~~~~~~~   99 (188)
T TIGR00438        27 FKLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTD---EEVLNKIRERVGDDKV   99 (188)
T ss_pred             hcccCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCC---hhHHHHHHHHhCCCCc
Confidence            3457899999999987744433333333343489999988754    11233322 13222   3334445554555 89


Q ss_pred             CEEEE-CC----CC------------hHHHHHHHHHhhcCCceEEEEC
Q 017457          256 DYCFE-CI----GL------------TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       256 d~vid-~~----g~------------~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      |+|+. ..    |.            ...++.+.+.|+++ |+++...
T Consensus       100 D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~  146 (188)
T TIGR00438       100 DVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKV  146 (188)
T ss_pred             cEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEE
Confidence            99994 32    21            23578889999998 9988754

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.81  E-value=0.0045  Score=47.27  Aligned_cols=91  Identities=20%  Similarity=0.216  Sum_probs=59.3

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  262 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~  262 (371)
                      +|++|||+|+|.+|..-++.+...|+ +|+++++..   +..+  +--... .     ..+.+.    . .++++|+-++
T Consensus         6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~-~-----~~~~~~----l-~~~~lV~~at   68 (103)
T PF13241_consen    6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLI-R-----REFEED----L-DGADLVFAAT   68 (103)
T ss_dssp             TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEE-E-----SS-GGG----C-TTESEEEE-S
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHH-h-----hhHHHH----H-hhheEEEecC
Confidence            57899999999999999999999999 999998775   2222  211111 1     122111    1 1799999999


Q ss_pred             CChHHHHHHHHHhhcCCceEEEECccCCC
Q 017457          263 GLTSVMNDAFNSSREGWGKTVILGVEMHG  291 (371)
Q Consensus       263 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~  291 (371)
                      +++..-+.+.+..+.. |.++........
T Consensus        69 ~d~~~n~~i~~~a~~~-~i~vn~~D~p~~   96 (103)
T PF13241_consen   69 DDPELNEAIYADARAR-GILVNVVDDPEL   96 (103)
T ss_dssp             S-HHHHHHHHHHHHHT-TSEEEETT-CCC
T ss_pred             CCHHHHHHHHHHHhhC-CEEEEECCCcCC
Confidence            9988455566666666 888888764433

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.79  E-value=0.0076  Score=59.54  Aligned_cols=75  Identities=19%  Similarity=0.220  Sum_probs=55.7

Q ss_pred             CCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEE
Q 017457          180 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCF  259 (371)
Q Consensus       180 ~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vi  259 (371)
                      .+.++++|+|+|.|..|++++.+++..|+ +|++.+..+++.+.++++|+..+ ....     ..+.+     ..+|+|+
T Consensus         8 ~~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~~-~~~~-----~~~~l-----~~~D~VV   75 (488)
T PRK03369          8 PLLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVATV-STSD-----AVQQI-----ADYALVV   75 (488)
T ss_pred             cccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEEE-cCcc-----hHhHh-----hcCCEEE
Confidence            35678999999999999999999999999 99999987776666777787433 2211     11112     1579999


Q ss_pred             ECCCChH
Q 017457          260 ECIGLTS  266 (371)
Q Consensus       260 d~~g~~~  266 (371)
                      .+.|-+.
T Consensus        76 ~SpGi~~   82 (488)
T PRK03369         76 TSPGFRP   82 (488)
T ss_pred             ECCCCCC
Confidence            9888643

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=96.77  E-value=0.017  Score=52.47  Aligned_cols=128  Identities=20%  Similarity=0.295  Sum_probs=76.0

Q ss_pred             ceeEECCCCCCcchhhccccchhhhHHHHHHH-cCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 017457          147 THVVKITPHIPLGIACLLSCGVSTGVGAAWKV-AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK  225 (371)
Q Consensus       147 ~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~-~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~  225 (371)
                      ..++++.+++.+    .......|++. +... .-+++|++||=+|+|. |.+++..+| +|+.+|++++..+-..+.++
T Consensus       130 ~~~i~lDPGlAF----GTG~HpTT~lc-L~~Le~~~~~g~~vlDvGcGS-GILaIAa~k-LGA~~v~g~DiDp~AV~aa~  202 (300)
T COG2264         130 ELNIELDPGLAF----GTGTHPTTSLC-LEALEKLLKKGKTVLDVGCGS-GILAIAAAK-LGAKKVVGVDIDPQAVEAAR  202 (300)
T ss_pred             ceEEEEcccccc----CCCCChhHHHH-HHHHHHhhcCCCEEEEecCCh-hHHHHHHHH-cCCceEEEecCCHHHHHHHH
Confidence            455666555533    23344555554 3222 2367999999999866 676665444 67778999999887665554


Q ss_pred             H----hCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC-CCChH--HHHHHHHHhhcCCceEEEECcc
Q 017457          226 K----FGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC-IGLTS--VMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       226 ~----lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~-~g~~~--~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      +    -+..... ...     .........++.+|+|+-. ..+..  ..+.+.+.++++ |++++.|..
T Consensus       203 eNa~~N~v~~~~-~~~-----~~~~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpg-g~lIlSGIl  265 (300)
T COG2264         203 ENARLNGVELLV-QAK-----GFLLLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPG-GRLILSGIL  265 (300)
T ss_pred             HHHHHcCCchhh-hcc-----cccchhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCC-ceEEEEeeh
Confidence            4    3333211 000     0011112223489999844 33332  356788899998 999999864

>PRK06949 short chain dehydrogenase; Provisional

Probab=96.77  E-value=0.0091  Score=53.42  Aligned_cols=82  Identities=13%  Similarity=0.178  Sum_probs=53.1

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-h---Cc-ceEEcCCCCCCccHHHHHHHhh--CC
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F---GI-TDFINPATCGDKTVSQVIKEMT--DG  253 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l---ga-~~v~~~~~~~~~~~~~~i~~~~--~g  253 (371)
                      ..++++||+|+ |++|...+..+...|+ +|+++.+++++.+.+.. +   +. .+++..+-.+.+++.+.+.+..  .+
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   85 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAG   85 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            45789999998 9999999999988999 89999998887655433 1   21 1222221101123333333322  13


Q ss_pred             CcCEEEECCCC
Q 017457          254 GADYCFECIGL  264 (371)
Q Consensus       254 g~d~vid~~g~  264 (371)
                      .+|+++++.+.
T Consensus        86 ~~d~li~~ag~   96 (258)
T PRK06949         86 TIDILVNNSGV   96 (258)
T ss_pred             CCCEEEECCCC
Confidence            78999998873

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.76  E-value=0.014  Score=48.70  Aligned_cols=96  Identities=15%  Similarity=0.204  Sum_probs=64.2

Q ss_pred             hccccchhhhHHHHHHHcCCCCCCeEEEEcCCh-HHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCC
Q 017457          162 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGA-VGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD  240 (371)
Q Consensus       162 a~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~-~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~  240 (371)
                      ...||...++...+.....--.+++|||+|+|. +|..++..++..|+ +|+++.++.+                     
T Consensus        22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~---------------------   79 (168)
T cd01080          22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTK---------------------   79 (168)
T ss_pred             CccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCch---------------------
Confidence            445555454444333333446889999999986 59989999999999 8888876521                     


Q ss_pred             ccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECcc
Q 017457          241 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       241 ~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                       ++.+.+.     .+|+||.+++.+..+..  +.++++ -.+++++..
T Consensus        80 -~l~~~l~-----~aDiVIsat~~~~ii~~--~~~~~~-~viIDla~p  118 (168)
T cd01080          80 -NLKEHTK-----QADIVIVAVGKPGLVKG--DMVKPG-AVVIDVGIN  118 (168)
T ss_pred             -hHHHHHh-----hCCEEEEcCCCCceecH--HHccCC-eEEEEccCC
Confidence             1222222     58999999998763332  246665 788888864

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.74  E-value=0.021  Score=51.48  Aligned_cols=106  Identities=20%  Similarity=0.270  Sum_probs=68.0

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HHhCcce-E--E--cCCCCCCccHHHHHHHh-
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-F--I--NPATCGDKTVSQVIKEM-  250 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~~-v--~--~~~~~~~~~~~~~i~~~-  250 (371)
                      ..|+.|+|+|| +++|.+.+.-.-..|+ +++.+.+..++++.+    ++.+... +  +  |-.+  .++..+.+.+. 
T Consensus        10 ~~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~--~~~~~~~~~~~~   86 (282)
T KOG1205|consen   10 LAGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSD--EESVKKFVEWAI   86 (282)
T ss_pred             hCCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCC--HHHHHHHHHHHH
Confidence            46899999998 8999987777777899 777777777777666    3344332 2  2  2221  12333333221 


Q ss_pred             -hCCCcCEEEECCCChH-------------------------HHHHHHHHhhcCC-ceEEEECccCC
Q 017457          251 -TDGGADYCFECIGLTS-------------------------VMNDAFNSSREGW-GKTVILGVEMH  290 (371)
Q Consensus       251 -~~gg~d~vid~~g~~~-------------------------~~~~~~~~l~~~~-G~~v~~g~~~~  290 (371)
                       .-|++|+.+|..|-..                         ..+.++..|+... |+|+..++..+
T Consensus        87 ~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG  153 (282)
T KOG1205|consen   87 RHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAG  153 (282)
T ss_pred             HhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccc
Confidence             1238999999887421                         2456667776644 89999986543

>PRK04148 hypothetical protein; Provisional

Probab=96.74  E-value=0.01  Score=47.20  Aligned_cols=95  Identities=17%  Similarity=0.205  Sum_probs=62.9

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      ..++.+++++|.| .|...+..+..+|. .|++++.+++..+.+++.+...+.+.--  +.++  .+    .+++|++..
T Consensus        14 ~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf--~p~~--~~----y~~a~liys   83 (134)
T PRK04148         14 KGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLF--NPNL--EI----YKNAKLIYS   83 (134)
T ss_pred             cccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCC--CCCH--HH----HhcCCEEEE
Confidence            3456889999998 77644555557899 9999999999999999888765554221  1221  11    127999998


Q ss_pred             CCCChHHHHHHHHHhhcCCceEEEE
Q 017457          261 CIGLTSVMNDAFNSSREGWGKTVIL  285 (371)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~~G~~v~~  285 (371)
                      .-..+.....+++..+.-+..++..
T Consensus        84 irpp~el~~~~~~la~~~~~~~~i~  108 (134)
T PRK04148         84 IRPPRDLQPFILELAKKINVPLIIK  108 (134)
T ss_pred             eCCCHHHHHHHHHHHHHcCCCEEEE
Confidence            8887774455555554431344443

>PRK06057 short chain dehydrogenase; Provisional

Probab=96.72  E-value=0.0092  Score=53.39  Aligned_cols=79  Identities=23%  Similarity=0.358  Sum_probs=52.3

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCcceE-EcCCCCCCccHHHHHHHhhC--CCcCE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDF-INPATCGDKTVSQVIKEMTD--GGADY  257 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~~v-~~~~~~~~~~~~~~i~~~~~--gg~d~  257 (371)
                      +|++|||+|+ |++|.+.++.+...|+ +|+++++++.+.+.. .+++...+ .|..+  .+...+.+.+...  +++|+
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~   82 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTD--EDAVNALFDTAAETYGSVDI   82 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCC--HHHHHHHHHHHHHHcCCCCE
Confidence            5789999998 9999999999988999 899999887766544 33443222 23222  1222222222221  37899


Q ss_pred             EEECCCC
Q 017457          258 CFECIGL  264 (371)
Q Consensus       258 vid~~g~  264 (371)
                      ++++.|.
T Consensus        83 vi~~ag~   89 (255)
T PRK06057         83 AFNNAGI   89 (255)
T ss_pred             EEECCCc
Confidence            9988763

>PRK07109 short chain dehydrogenase; Provisional

Probab=96.72  E-value=0.024  Score=53.06  Aligned_cols=79  Identities=20%  Similarity=0.140  Sum_probs=52.2

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcce-E--EcCCCCCCccHHHHHHHhhC--
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-F--INPATCGDKTVSQVIKEMTD--  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~~-v--~~~~~~~~~~~~~~i~~~~~--  252 (371)
                      +++++||+|+ |++|...++.+...|+ +|+++++++++.+.+.    +.|.+. .  .|..+  .++..+.+.....  
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d--~~~v~~~~~~~~~~~   83 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVAD--AEAVQAAADRAEEEL   83 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCC--HHHHHHHHHHHHHHC
Confidence            4689999998 9999999999988999 8999999887765432    345432 2  23222  1222222222221  


Q ss_pred             CCcCEEEECCCC
Q 017457          253 GGADYCFECIGL  264 (371)
Q Consensus       253 gg~d~vid~~g~  264 (371)
                      +.+|+++++.|.
T Consensus        84 g~iD~lInnAg~   95 (334)
T PRK07109         84 GPIDTWVNNAMV   95 (334)
T ss_pred             CCCCEEEECCCc
Confidence            378999998874

>PRK07806 short chain dehydrogenase; Provisional

Probab=96.70  E-value=0.028  Score=49.96  Aligned_cols=101  Identities=14%  Similarity=0.139  Sum_probs=60.3

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-HHHHH----HHhCcc-eEE--cCCCCCCccHHHHHHHhhC-
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE-KFEIG----KKFGIT-DFI--NPATCGDKTVSQVIKEMTD-  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~-~~~~~----~~lga~-~v~--~~~~~~~~~~~~~i~~~~~-  252 (371)
                      +++++||+|+ |++|...+..+...|+ +|+++.++.+ +.+.+    +..+.. ..+  |..+  .++..+.+.+... 
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   81 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTD--EESVAALMDTAREE   81 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHh
Confidence            4689999998 9999999998888999 8888877643 33322    222322 122  3222  1222223333222 


Q ss_pred             -CCcCEEEECCCCh-------------------HHHHHHHHHhhcCCceEEEECc
Q 017457          253 -GGADYCFECIGLT-------------------SVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       253 -gg~d~vid~~g~~-------------------~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                       +++|+++.+.+..                   ..++.+.+.+... |+++.++.
T Consensus        82 ~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS  135 (248)
T PRK07806         82 FGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS  135 (248)
T ss_pred             CCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence             2689999877532                   1234455555555 78888865

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=96.70  E-value=0.024  Score=44.31  Aligned_cols=101  Identities=19%  Similarity=0.343  Sum_probs=66.5

Q ss_pred             HHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc--eEEcCCCCCCccHHHHHHHh
Q 017457          177 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIKEM  250 (371)
Q Consensus       177 ~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~--~v~~~~~~~~~~~~~~i~~~  250 (371)
                      ....+.++++||-+|+|. |..+..+++..+..+|++++.++...+.+++    .+..  .++..+-   ...   ... 
T Consensus        13 ~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~---~~~---~~~-   84 (124)
T TIGR02469        13 SKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDA---PEA---LED-   84 (124)
T ss_pred             HHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccc---ccc---Chh-
Confidence            345567788999999977 8888888987654499999999987777643    4432  2222111   110   111 


Q ss_pred             hCCCcCEEEECCCC---hHHHHHHHHHhhcCCceEEEEC
Q 017457          251 TDGGADYCFECIGL---TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       251 ~~gg~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      ....+|+|+...+.   ...++.+.+.|+++ |.++.-.
T Consensus        85 ~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~~  122 (124)
T TIGR02469        85 SLPEPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLNA  122 (124)
T ss_pred             hcCCCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEEe
Confidence            12379999965432   22478899999998 9987653

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>PRK12828 short chain dehydrogenase; Provisional

Probab=96.70  E-value=0.028  Score=49.41  Aligned_cols=79  Identities=19%  Similarity=0.174  Sum_probs=50.0

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHH----HHHhCcceE-EcCCCCCCccHHHHHHHhhC--CC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEI----GKKFGITDF-INPATCGDKTVSQVIKEMTD--GG  254 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~----~~~lga~~v-~~~~~~~~~~~~~~i~~~~~--gg  254 (371)
                      +++++||+|+ |.+|...++.+...|+ +|++++++.++.+.    +...+...+ .|..+  .+++.+.+.+...  ++
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~   82 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVD--PQAARRAVDEVNRQFGR   82 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCC--HHHHHHHHHHHHHHhCC
Confidence            4789999998 9999999998888899 89999987765332    222233222 22221  1223333333222  27


Q ss_pred             cCEEEECCCC
Q 017457          255 ADYCFECIGL  264 (371)
Q Consensus       255 ~d~vid~~g~  264 (371)
                      +|+++++.+.
T Consensus        83 ~d~vi~~ag~   92 (239)
T PRK12828         83 LDALVNIAGA   92 (239)
T ss_pred             cCEEEECCcc
Confidence            8999988763

>PRK08017 oxidoreductase; Provisional

Probab=96.69  E-value=0.0066  Score=54.23  Aligned_cols=77  Identities=18%  Similarity=0.291  Sum_probs=54.1

Q ss_pred             CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEE-cCCCCCCccH---HHHHHHhhCCCcCEEE
Q 017457          185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI-NPATCGDKTV---SQVIKEMTDGGADYCF  259 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~-~~~~~~~~~~---~~~i~~~~~gg~d~vi  259 (371)
                      +++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+++.++..+. |..+  ....   .+.+.+...+.+|.++
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~~~~~~ii   79 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDD--PESVERAADEVIALTDNRLYGLF   79 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCC--HHHHHHHHHHHHHhcCCCCeEEE
Confidence            57999998 9999999999999999 899999999888877777765432 3222  1112   2222232334788888


Q ss_pred             ECCCC
Q 017457          260 ECIGL  264 (371)
Q Consensus       260 d~~g~  264 (371)
                      ++.|.
T Consensus        80 ~~ag~   84 (256)
T PRK08017         80 NNAGF   84 (256)
T ss_pred             ECCCC
Confidence            87763

>PRK12939 short chain dehydrogenase; Provisional

Probab=96.69  E-value=0.033  Score=49.44  Aligned_cols=80  Identities=20%  Similarity=0.147  Sum_probs=51.3

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcc-eEE--cCCCCCCccHHHHHHHhhC-
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFI--NPATCGDKTVSQVIKEMTD-  252 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~-~v~--~~~~~~~~~~~~~i~~~~~-  252 (371)
                      -+++++||+|+ |++|...+..+...|+ +|+++++++++.+.+.    +.+.. .++  |-.+  .++..+.+.+... 
T Consensus         5 ~~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~   81 (250)
T PRK12939          5 LAGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLAD--PASVQRFFDAAAAA   81 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHH
Confidence            35789999998 9999999998888999 8999988877655432    22322 222  3222  1222222222211 


Q ss_pred             -CCcCEEEECCCC
Q 017457          253 -GGADYCFECIGL  264 (371)
Q Consensus       253 -gg~d~vid~~g~  264 (371)
                       +++|+++++.|.
T Consensus        82 ~~~id~vi~~ag~   94 (250)
T PRK12939         82 LGGLDGLVNNAGI   94 (250)
T ss_pred             cCCCCEEEECCCC
Confidence             379999999875

>PRK07060 short chain dehydrogenase; Provisional

Probab=96.68  E-value=0.016  Score=51.23  Aligned_cols=77  Identities=17%  Similarity=0.275  Sum_probs=52.4

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcceE-EcCCCCCCccHHHHHHHhhCCCcCEEE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDF-INPATCGDKTVSQVIKEMTDGGADYCF  259 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v-~~~~~~~~~~~~~~i~~~~~gg~d~vi  259 (371)
                      ++++++|+|+ |++|...++.+...|+ +|++++++.++.+.+.+ .+...+ .|..+   .+....+.+. .+++|++|
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~---~~~v~~~~~~-~~~~d~vi   82 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGD---DAAIRAALAA-AGAFDGLV   82 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCC---HHHHHHHHHH-hCCCCEEE
Confidence            5689999998 9999999999999999 89999998877665543 344322 23222   2222222221 13789999


Q ss_pred             ECCCC
Q 017457          260 ECIGL  264 (371)
Q Consensus       260 d~~g~  264 (371)
                      ++.|.
T Consensus        83 ~~ag~   87 (245)
T PRK07060         83 NCAGI   87 (245)
T ss_pred             ECCCC
Confidence            98874

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=96.68  E-value=0.0072  Score=46.52  Aligned_cols=92  Identities=26%  Similarity=0.335  Sum_probs=61.3

Q ss_pred             CCCeEEEEcCChHHHHHHHHHH-HcCCCeEEEEcCChhHHHHHHHh----Cc-ceEEcCCCCCCccHHHHHHHhh-CCCc
Q 017457          183 VGSTVAIFGLGAVGLAVAEGAR-LNRASKIIGVDINPEKFEIGKKF----GI-TDFINPATCGDKTVSQVIKEMT-DGGA  255 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~-~~g~~~Vi~~~~~~~~~~~~~~l----ga-~~v~~~~~~~~~~~~~~i~~~~-~gg~  255 (371)
                      |+++||-+|+|. |..++.+++ ..++ +|++++.+++..+.+++.    +. +.+- ...   .++ .  .... ...+
T Consensus         1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~-~~~---~d~-~--~~~~~~~~~   71 (112)
T PF12847_consen    1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRIT-FVQ---GDA-E--FDPDFLEPF   71 (112)
T ss_dssp             TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEE-EEE---SCC-H--GGTTTSSCE
T ss_pred             CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeE-EEE---Ccc-c--cCcccCCCC
Confidence            688999999877 788888888 4777 999999999988877652    21 2221 111   222 1  1111 2279


Q ss_pred             CEEEECC-CCh---------HHHHHHHHHhhcCCceEEE
Q 017457          256 DYCFECI-GLT---------SVMNDAFNSSREGWGKTVI  284 (371)
Q Consensus       256 d~vid~~-g~~---------~~~~~~~~~l~~~~G~~v~  284 (371)
                      |+|+... ...         ..++.+.+.|+|+ |+++.
T Consensus        72 D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi  109 (112)
T PF12847_consen   72 DLVICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVI  109 (112)
T ss_dssp             EEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEE
T ss_pred             CEEEECCCccccccchhHHHHHHHHHHHhcCCC-cEEEE
Confidence            9999766 211         1368888999998 98875

...

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.67  E-value=0.013  Score=56.34  Aligned_cols=96  Identities=11%  Similarity=0.068  Sum_probs=62.1

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEE
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCF  259 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vi  259 (371)
                      -..+++|||+|+|.+|.+++..+...|+.+++++.++.++.+.+ .+++...++.        + +.+.+... .+|+||
T Consensus       178 ~l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~--------~-~~l~~~l~-~aDiVI  247 (414)
T PRK13940        178 NISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHY--------L-SELPQLIK-KADIII  247 (414)
T ss_pred             CccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEec--------H-HHHHHHhc-cCCEEE
Confidence            35678999999999999999999999987899999998876554 4454222222        2 12222222 689999


Q ss_pred             ECCCChHHHHHHHHHhhcCCceEEEECc
Q 017457          260 ECIGLTSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       260 d~~g~~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      +|++.+...=. .+.+....=.+++++.
T Consensus       248 ~aT~a~~~vi~-~~~~~~~~~~~iDLav  274 (414)
T PRK13940        248 AAVNVLEYIVT-CKYVGDKPRVFIDISI  274 (414)
T ss_pred             ECcCCCCeeEC-HHHhCCCCeEEEEeCC
Confidence            99998762211 1122211024677775

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.67  E-value=0.033  Score=45.85  Aligned_cols=91  Identities=22%  Similarity=0.323  Sum_probs=60.1

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      +-.|++++|.|=|-+|.-.++.++.+|+ +|++++.++-+.-.+..-|.. +.        ...+    .. ...|+++.
T Consensus        20 ~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~-v~--------~~~~----a~-~~adi~vt   84 (162)
T PF00670_consen   20 MLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFE-VM--------TLEE----AL-RDADIFVT   84 (162)
T ss_dssp             --TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-E-EE---------HHH----HT-TT-SEEEE
T ss_pred             eeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcE-ec--------CHHH----HH-hhCCEEEE
Confidence            5689999999999999999999999999 999999999777666655653 22        1222    21 26899999


Q ss_pred             CCCChHH-HHHHHHHhhcCCceEEEECc
Q 017457          261 CIGLTSV-MNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       261 ~~g~~~~-~~~~~~~l~~~~G~~v~~g~  287 (371)
                      ++|.... -..-++.|+++ ..++..|.
T Consensus        85 aTG~~~vi~~e~~~~mkdg-ail~n~Gh  111 (162)
T PF00670_consen   85 ATGNKDVITGEHFRQMKDG-AILANAGH  111 (162)
T ss_dssp             -SSSSSSB-HHHHHHS-TT-EEEEESSS
T ss_pred             CCCCccccCHHHHHHhcCC-eEEeccCc
Confidence            9998663 35778889886 55555554

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK12829 short chain dehydrogenase; Provisional

Probab=96.64  E-value=0.011  Score=53.15  Aligned_cols=85  Identities=18%  Similarity=0.172  Sum_probs=54.1

Q ss_pred             CCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCc-c--eEEcCCCCCCccHHHHHHHhhC--C
Q 017457          180 GVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI-T--DFINPATCGDKTVSQVIKEMTD--G  253 (371)
Q Consensus       180 ~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga-~--~v~~~~~~~~~~~~~~i~~~~~--g  253 (371)
                      ..-+++++||+|+ |++|...+..+...|+ +|+++.++.+..+.+.+... .  .++..+-.+.....+.+.+...  +
T Consensus         7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   85 (264)
T PRK12829          7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFG   85 (264)
T ss_pred             hccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            3457899999998 9999999999999999 89999988776665544221 1  2222111011222222222211  3


Q ss_pred             CcCEEEECCCCh
Q 017457          254 GADYCFECIGLT  265 (371)
Q Consensus       254 g~d~vid~~g~~  265 (371)
                      ++|+||++.|..
T Consensus        86 ~~d~vi~~ag~~   97 (264)
T PRK12829         86 GLDVLVNNAGIA   97 (264)
T ss_pred             CCCEEEECCCCC
Confidence            799999988753

>PRK06139 short chain dehydrogenase; Provisional

Probab=96.64  E-value=0.0099  Score=55.60  Aligned_cols=80  Identities=19%  Similarity=0.280  Sum_probs=53.2

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcce-EE--cCCCCCCccHHHHHHHhh--
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FI--NPATCGDKTVSQVIKEMT--  251 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~~-v~--~~~~~~~~~~~~~i~~~~--  251 (371)
                      .+++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.    +.|.+. ++  |-.+  .++..+.+.+..  
T Consensus         5 l~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d--~~~v~~~~~~~~~~   81 (330)
T PRK06139          5 LHGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTD--ADQVKALATQAASF   81 (330)
T ss_pred             CCCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC--HHHHHHHHHHHHHh
Confidence            35789999998 9999999999999999 8999999988776442    345432 22  3222  122222222211  


Q ss_pred             CCCcCEEEECCCC
Q 017457          252 DGGADYCFECIGL  264 (371)
Q Consensus       252 ~gg~d~vid~~g~  264 (371)
                      .+++|++|++.|.
T Consensus        82 ~g~iD~lVnnAG~   94 (330)
T PRK06139         82 GGRIDVWVNNVGV   94 (330)
T ss_pred             cCCCCEEEECCCc
Confidence            2479999999873

>PRK14967 putative methyltransferase; Provisional

Probab=96.58  E-value=0.1  Score=45.77  Aligned_cols=97  Identities=16%  Similarity=0.178  Sum_probs=63.3

Q ss_pred             HcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eEEcCCCCCCccHHHHHHHhhC
Q 017457          178 VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       178 ~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~~~~~~~~~~~~~~i~~~~~  252 (371)
                      ...++++++||-.|+|. |..++.+++. +..+|++++.+++..+.+++    .+.. .+++      .++.+.   +..
T Consensus        31 ~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~------~d~~~~---~~~   99 (223)
T PRK14967         31 AEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRR------GDWARA---VEF   99 (223)
T ss_pred             hcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEE------Cchhhh---ccC
Confidence            34577889999999987 8888888875 55589999999987775544    3432 2222      122221   122


Q ss_pred             CCcCEEEECCCC---------------------------hHHHHHHHHHhhcCCceEEEEC
Q 017457          253 GGADYCFECIGL---------------------------TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       253 gg~d~vid~~g~---------------------------~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      +.+|+|+...+-                           ...+..+.+.|+++ |+++.+.
T Consensus       100 ~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~~  159 (223)
T PRK14967        100 RPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLVQ  159 (223)
T ss_pred             CCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEEE
Confidence            379999864220                           01245677889997 9988653

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.57  E-value=0.03  Score=51.09  Aligned_cols=95  Identities=14%  Similarity=0.068  Sum_probs=60.1

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCc----ceEEcCCCCCCccHHHHHHHhhCCCcC
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGI----TDFINPATCGDKTVSQVIKEMTDGGAD  256 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga----~~v~~~~~~~~~~~~~~i~~~~~gg~d  256 (371)
                      ..+++|+|+|+|+.|.+++..+..+|+++|++++++.+|.+.+.+ ++.    ..+...+     +..+.+     ..+|
T Consensus       125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~-----~~~~~~-----~~aD  194 (284)
T PRK12549        125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGS-----DLAAAL-----AAAD  194 (284)
T ss_pred             ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEecc-----chHhhh-----CCCC
Confidence            456899999999999999999999999899999999888776533 321    1222111     111111     2689


Q ss_pred             EEEECCCChH----HHHHHHHHhhcCCceEEEECc
Q 017457          257 YCFECIGLTS----VMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       257 ~vid~~g~~~----~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      +||+|++...    ........+++. ..++++-.
T Consensus       195 iVInaTp~Gm~~~~~~~~~~~~l~~~-~~v~DivY  228 (284)
T PRK12549        195 GLVHATPTGMAKHPGLPLPAELLRPG-LWVADIVY  228 (284)
T ss_pred             EEEECCcCCCCCCCCCCCCHHHcCCC-cEEEEeee
Confidence            9999965321    001112346664 55665544

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=96.57  E-value=0.014  Score=52.38  Aligned_cols=80  Identities=19%  Similarity=0.234  Sum_probs=52.4

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcc-eEEcCCCCCCccHHHHHHHhhC--CCcCE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT-DFINPATCGDKTVSQVIKEMTD--GGADY  257 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~-~v~~~~~~~~~~~~~~i~~~~~--gg~d~  257 (371)
                      +++++||+|+ +++|...++.+...|+ +|+++++++++.+.+.+ ++.. .++..+-.+..+..+.+.+...  +.+|+
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   83 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC   83 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            5789999998 9999999988888999 89999998887766544 3321 2221111011223333333222  37899


Q ss_pred             EEECCC
Q 017457          258 CFECIG  263 (371)
Q Consensus       258 vid~~g  263 (371)
                      ++++.|
T Consensus        84 li~~ag   89 (263)
T PRK06200         84 FVGNAG   89 (263)
T ss_pred             EEECCC
Confidence            999877

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=96.55  E-value=0.011  Score=53.35  Aligned_cols=97  Identities=18%  Similarity=0.169  Sum_probs=69.7

Q ss_pred             CeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEE-cCCCCCCccHHHHHHHhhCCCcCEEEECC-
Q 017457          185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI-NPATCGDKTVSQVIKEMTDGGADYCFECI-  262 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~-~~~~~~~~~~~~~i~~~~~gg~d~vid~~-  262 (371)
                      .+|.|+|+|.+|.-++.+|.-+|+ +|++.+.+.+|+..+..+-..++- -+++  ..++.+.+.     ++|++|.++ 
T Consensus       169 ~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st--~~~iee~v~-----~aDlvIgaVL  240 (371)
T COG0686         169 AKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYST--PSNIEEAVK-----KADLVIGAVL  240 (371)
T ss_pred             ccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcC--HHHHHHHhh-----hccEEEEEEE
Confidence            457788999999999999999999 999999999999988774333221 1221  123333332     689998753 


Q ss_pred             -CCh----HHHHHHHHHhhcCCceEEEECccCC
Q 017457          263 -GLT----SVMNDAFNSSREGWGKTVILGVEMH  290 (371)
Q Consensus       263 -g~~----~~~~~~~~~l~~~~G~~v~~g~~~~  290 (371)
                       ++.    ...++.++.|+++ +.++++....+
T Consensus       241 IpgakaPkLvt~e~vk~MkpG-sVivDVAiDqG  272 (371)
T COG0686         241 IPGAKAPKLVTREMVKQMKPG-SVIVDVAIDQG  272 (371)
T ss_pred             ecCCCCceehhHHHHHhcCCC-cEEEEEEEcCC
Confidence             221    2467889999998 99999987443

>PRK07825 short chain dehydrogenase; Provisional

Probab=96.54  E-value=0.016  Score=52.48  Aligned_cols=78  Identities=19%  Similarity=0.246  Sum_probs=51.7

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhCcceE--EcCCCCCCccHHHHHHHhhC--CCcCE
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDF--INPATCGDKTVSQVIKEMTD--GGADY  257 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga~~v--~~~~~~~~~~~~~~i~~~~~--gg~d~  257 (371)
                      ++++||+|+ |++|...++.+...|+ +|+++++++++.+.+. .++...+  .|-.+  .+++.+.+.....  +++|+
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~   81 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTD--PASFAAFLDAVEADLGPIDV   81 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCC--HHHHHHHHHHHHHHcCCCCE
Confidence            679999998 9999999988888899 8999998888766543 3441222  23222  1223222333222  37899


Q ss_pred             EEECCCC
Q 017457          258 CFECIGL  264 (371)
Q Consensus       258 vid~~g~  264 (371)
                      ++++.|.
T Consensus        82 li~~ag~   88 (273)
T PRK07825         82 LVNNAGV   88 (273)
T ss_pred             EEECCCc
Confidence            9998873

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.54  E-value=0.012  Score=50.91  Aligned_cols=92  Identities=12%  Similarity=-0.010  Sum_probs=57.9

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-HHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE-KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~-~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      .|++|||+|+|.+|...+..+...|+ +|+++.+... ....+.+.+.-. +....     +...  .+  .++|+||-+
T Consensus         9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~~~i~-~~~~~-----~~~~--~l--~~adlViaa   77 (202)
T PRK06718          9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEEGKIR-WKQKE-----FEPS--DI--VDAFLVIAA   77 (202)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhCCCEE-EEecC-----CChh--hc--CCceEEEEc
Confidence            57899999999999998888888998 8888875432 222222222111 11111     1100  01  278999999


Q ss_pred             CCChHHHHHHHHHhhcCCceEEEECc
Q 017457          262 IGLTSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       262 ~g~~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      ++++. .+..+...... +.++....
T Consensus        78 T~d~e-lN~~i~~~a~~-~~lvn~~d  101 (202)
T PRK06718         78 TNDPR-VNEQVKEDLPE-NALFNVIT  101 (202)
T ss_pred             CCCHH-HHHHHHHHHHh-CCcEEECC
Confidence            99988 66666665554 66666654

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.50  E-value=0.023  Score=49.20  Aligned_cols=93  Identities=16%  Similarity=0.109  Sum_probs=61.0

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-HHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE-KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~-~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      .|++|||+|+|.+|...+..+...|+ +|+++++... ....+.+.|--..+. .+     +...  .+  .++++|+-+
T Consensus         8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~~-~~-----~~~~--dl--~~~~lVi~a   76 (205)
T TIGR01470         8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWLA-RC-----FDAD--IL--EGAFLVIAA   76 (205)
T ss_pred             CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEEe-CC-----CCHH--Hh--CCcEEEEEC
Confidence            47899999999999999999999999 8999876543 333333334212222 11     1111  11  279999999


Q ss_pred             CCChHHHHHHHHHhhcCCceEEEECc
Q 017457          262 IGLTSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       262 ~g~~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      ++.+..-..+....+.. |..+....
T Consensus        77 t~d~~ln~~i~~~a~~~-~ilvn~~d  101 (205)
T TIGR01470        77 TDDEELNRRVAHAARAR-GVPVNVVD  101 (205)
T ss_pred             CCCHHHHHHHHHHHHHc-CCEEEECC
Confidence            99986344555556665 77776654

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK05867 short chain dehydrogenase; Provisional

Probab=96.49  E-value=0.018  Score=51.50  Aligned_cols=79  Identities=19%  Similarity=0.183  Sum_probs=51.9

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eE--EcCCCCCCccHHHHHHHhhC--
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DF--INPATCGDKTVSQVIKEMTD--  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v--~~~~~~~~~~~~~~i~~~~~--  252 (371)
                      +++++||+|+ |++|.+.+..+...|+ +|++++++.++.+.+.+    .+.+ ..  .|-.+  .+...+.+.+...  
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   84 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQ--HQQVTSMLDQVTAEL   84 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence            5789999998 9999999999988999 89999988877655432    2322 12  23222  1223333332221  


Q ss_pred             CCcCEEEECCCC
Q 017457          253 GGADYCFECIGL  264 (371)
Q Consensus       253 gg~d~vid~~g~  264 (371)
                      +.+|+++++.|.
T Consensus        85 g~id~lv~~ag~   96 (253)
T PRK05867         85 GGIDIAVCNAGI   96 (253)
T ss_pred             CCCCEEEECCCC
Confidence            378999998763

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.49  E-value=0.022  Score=49.41  Aligned_cols=100  Identities=16%  Similarity=0.178  Sum_probs=65.8

Q ss_pred             HHHcCCCCCCeEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHH----hCcc---eEEcCCCCCCccHHHHH
Q 017457          176 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVI  247 (371)
Q Consensus       176 ~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~----lga~---~v~~~~~~~~~~~~~~i  247 (371)
                      .....++++++||-+|+|. |..++.+++..+ ..+|++++.+++..+.+++    .+..   .++..+-      .+.+
T Consensus        65 ~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~------~~~~  137 (205)
T PRK13944         65 CELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDG------KRGL  137 (205)
T ss_pred             HHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCc------ccCC
Confidence            3456678899999999866 777778887764 2289999999886665543    4432   2332221      1111


Q ss_pred             HHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEE
Q 017457          248 KEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL  285 (371)
Q Consensus       248 ~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~  285 (371)
                      .  ..+.||+|+-+.......+.+.+.|+++ |+++..
T Consensus       138 ~--~~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~  172 (205)
T PRK13944        138 E--KHAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP  172 (205)
T ss_pred             c--cCCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence            0  1237999986655445467888999998 998764

>PRK08628 short chain dehydrogenase; Provisional

Probab=96.48  E-value=0.05  Score=48.62  Aligned_cols=81  Identities=14%  Similarity=0.162  Sum_probs=50.6

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH---hCcc-eEEcCCCCCCccHHHHHHHhhC--CCc
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK---FGIT-DFINPATCGDKTVSQVIKEMTD--GGA  255 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~---lga~-~v~~~~~~~~~~~~~~i~~~~~--gg~  255 (371)
                      +++++||+|+ |++|...+..+...|+ +|+++++++++.+...+   .+.. ..+..+-.+.++..+.+.+...  +++
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI   84 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            4689999998 9999998888888899 78888888776544333   2322 1222111011223333333222  378


Q ss_pred             CEEEECCCC
Q 017457          256 DYCFECIGL  264 (371)
Q Consensus       256 d~vid~~g~  264 (371)
                      |+++++.|.
T Consensus        85 d~vi~~ag~   93 (258)
T PRK08628         85 DGLVNNAGV   93 (258)
T ss_pred             CEEEECCcc
Confidence            999999883

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=96.48  E-value=0.017  Score=51.97  Aligned_cols=78  Identities=14%  Similarity=0.142  Sum_probs=52.3

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh-Ccc-eEE--cCCCCCCccHHHHHHHhhC--CCc
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GIT-DFI--NPATCGDKTVSQVIKEMTD--GGA  255 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l-ga~-~v~--~~~~~~~~~~~~~i~~~~~--gg~  255 (371)
                      ++++++|+|+ |++|.+.++.+...|+ +|++++++.++.+.+.+. +.. ..+  |-.+  ..+..+.+.+...  +.+
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i   80 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRS--LDDHKEAVARCVAAFGKI   80 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCC--HHHHHHHHHHHHHHhCCC
Confidence            4789999998 9999999988888999 899999888777666543 321 122  2221  1223333333322  378


Q ss_pred             CEEEECCC
Q 017457          256 DYCFECIG  263 (371)
Q Consensus       256 d~vid~~g  263 (371)
                      |+++++.|
T Consensus        81 d~li~~Ag   88 (262)
T TIGR03325        81 DCLIPNAG   88 (262)
T ss_pred             CEEEECCC
Confidence            99999876

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK05866 short chain dehydrogenase; Provisional

Probab=96.47  E-value=0.019  Score=52.76  Aligned_cols=81  Identities=17%  Similarity=0.217  Sum_probs=51.7

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eEEcCCCCCCccHHHHHHHhh--CCC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMT--DGG  254 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~~~~~~~~~~~~~~i~~~~--~gg  254 (371)
                      .++++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.+    .+.+ .++..+-.+.++..+.+....  -+.
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  117 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGG  117 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4578999998 9999999998888899 99999998877655432    2322 222221101122223233221  137


Q ss_pred             cCEEEECCCC
Q 017457          255 ADYCFECIGL  264 (371)
Q Consensus       255 ~d~vid~~g~  264 (371)
                      +|+++++.|.
T Consensus       118 id~li~~AG~  127 (293)
T PRK05866        118 VDILINNAGR  127 (293)
T ss_pred             CCEEEECCCC
Confidence            8999999874

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.47  E-value=0.032  Score=46.09  Aligned_cols=90  Identities=18%  Similarity=0.137  Sum_probs=58.0

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      -.|++|||+|+|.+|..-++.+...|+ +|++++  ++..+.+.+++.-. +..+.     +.+.  .+  .++|+|+-+
T Consensus        11 l~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~-~~~~~-----~~~~--dl--~~a~lViaa   77 (157)
T PRK06719         11 LHNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYIT-WKQKT-----FSND--DI--KDAHLIYAA   77 (157)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcE-EEecc-----cChh--cC--CCceEEEEC
Confidence            357899999999999998888888899 888885  33334444454221 22222     1110  01  278999999


Q ss_pred             CCChHHHHHHHHHhhcCCceEEEEC
Q 017457          262 IGLTSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       262 ~g~~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      +++.. .+..+...... +.++...
T Consensus        78 T~d~e-~N~~i~~~a~~-~~~vn~~  100 (157)
T PRK06719         78 TNQHA-VNMMVKQAAHD-FQWVNVV  100 (157)
T ss_pred             CCCHH-HHHHHHHHHHH-CCcEEEC
Confidence            99888 77766666654 4444443

>PRK07814 short chain dehydrogenase; Provisional

Probab=96.46  E-value=0.019  Score=51.70  Aligned_cols=78  Identities=13%  Similarity=0.163  Sum_probs=51.2

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eE--EcCCCCCCccHHHHHHHhhC--
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DF--INPATCGDKTVSQVIKEMTD--  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v--~~~~~~~~~~~~~~i~~~~~--  252 (371)
                      +++++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+    .+.. ++  .|..+  .....+.+.+...  
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   85 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAH--PEATAGLAGQAVEAF   85 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence            5789999998 9999999998888999 99999998876654432    2322 22  23222  1222222222211  


Q ss_pred             CCcCEEEECCC
Q 017457          253 GGADYCFECIG  263 (371)
Q Consensus       253 gg~d~vid~~g  263 (371)
                      +++|+++++.|
T Consensus        86 ~~id~vi~~Ag   96 (263)
T PRK07814         86 GRLDIVVNNVG   96 (263)
T ss_pred             CCCCEEEECCC
Confidence            37899999877

>PRK07677 short chain dehydrogenase; Provisional

Probab=96.45  E-value=0.017  Score=51.55  Aligned_cols=80  Identities=19%  Similarity=0.173  Sum_probs=51.2

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eEEcCCCCCCccHHHHHHHhhC--CCc
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--GGA  255 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~~~~~~~~~~~~~~i~~~~~--gg~  255 (371)
                      |+++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+    .+.. .++..+-.+.+...+.+.+...  +.+
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRI   79 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence            578999998 9999999999988999 99999988876655432    2221 2232221111233333333221  378


Q ss_pred             CEEEECCCC
Q 017457          256 DYCFECIGL  264 (371)
Q Consensus       256 d~vid~~g~  264 (371)
                      |+++++.|.
T Consensus        80 d~lI~~ag~   88 (252)
T PRK07677         80 DALINNAAG   88 (252)
T ss_pred             cEEEECCCC
Confidence            999998863

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.44  E-value=0.013  Score=53.14  Aligned_cols=46  Identities=28%  Similarity=0.208  Sum_probs=40.5

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK  226 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~  226 (371)
                      ..++++++|+|+|+.+.+++.-++..|+.+|+++.|+.+|.+.+.+
T Consensus       123 ~~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~  168 (283)
T COG0169         123 DVTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELAD  168 (283)
T ss_pred             ccCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence            3458999999999999999999999998799999999998777654

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.42  E-value=0.042  Score=53.69  Aligned_cols=78  Identities=22%  Similarity=0.371  Sum_probs=49.9

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh--hHHHH-HHHhCcceE-EcCCCCCCccHHHHHHH-hh--CC
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP--EKFEI-GKKFGITDF-INPATCGDKTVSQVIKE-MT--DG  253 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~--~~~~~-~~~lga~~v-~~~~~~~~~~~~~~i~~-~~--~g  253 (371)
                      .+++++||+|+ |++|...++.+...|+ +|+++++..  ++.+. ..+++...+ +|..+   .+-.+.+.+ ..  .+
T Consensus       208 ~~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~---~~~~~~~~~~~~~~~g  283 (450)
T PRK08261        208 LAGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITA---PDAPARIAEHLAERHG  283 (450)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCC---HHHHHHHHHHHHHhCC
Confidence            35789999998 9999999999989999 888887643  23332 234554322 34332   222222222 22  22


Q ss_pred             CcCEEEECCC
Q 017457          254 GADYCFECIG  263 (371)
Q Consensus       254 g~d~vid~~g  263 (371)
                      ++|++|++.|
T Consensus       284 ~id~vi~~AG  293 (450)
T PRK08261        284 GLDIVVHNAG  293 (450)
T ss_pred             CCCEEEECCC
Confidence            6899999987

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.42  E-value=0.015  Score=53.07  Aligned_cols=76  Identities=12%  Similarity=0.003  Sum_probs=51.8

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcc-eEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT-DFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~-~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      ++++++|+|+|+.+.+++.-+..+|+++|+++.++.+|.+.+.+ ++.. .+....      ..+.+.... ..+|+||+
T Consensus       124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~------~~~~~~~~~-~~~DiVIn  196 (282)
T TIGR01809       124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE------GDSGGLAIE-KAAEVLVS  196 (282)
T ss_pred             CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc------chhhhhhcc-cCCCEEEE
Confidence            57899999999999999998999999899999999887766543 3321 111000      001111111 26899999


Q ss_pred             CCCCh
Q 017457          261 CIGLT  265 (371)
Q Consensus       261 ~~g~~  265 (371)
                      |++..
T Consensus       197 aTp~g  201 (282)
T TIGR01809       197 TVPAD  201 (282)
T ss_pred             CCCCC
Confidence            98854

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.42  E-value=0.012  Score=51.37  Aligned_cols=101  Identities=20%  Similarity=0.240  Sum_probs=67.1

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHH----hCcce--EEcCCCCCCccHHHHH
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGITD--FINPATCGDKTVSQVI  247 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~----lga~~--v~~~~~~~~~~~~~~i  247 (371)
                      +.....++++++||-+|+|. |..+..+++..+. .+|+.++.+++-.+.+++    .|...  ++..+-  ...+    
T Consensus        68 ~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~--~~~~----  140 (212)
T PRK13942         68 MCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDG--TLGY----  140 (212)
T ss_pred             HHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCc--ccCC----
Confidence            34556789999999999876 7777788887653 289999999887766544    44332  222221  0011    


Q ss_pred             HHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEE
Q 017457          248 KEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL  285 (371)
Q Consensus       248 ~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~  285 (371)
                        ...+.||+|+-........+.+++.|+++ |+++..
T Consensus       141 --~~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~  175 (212)
T PRK13942        141 --EENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIP  175 (212)
T ss_pred             --CcCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEE
Confidence              01237999975444444467889999998 998765

>PRK05872 short chain dehydrogenase; Provisional

Probab=96.41  E-value=0.02  Score=52.59  Aligned_cols=79  Identities=19%  Similarity=0.275  Sum_probs=53.4

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCc--ce-E--EcCCCCCCccHHHHHHHhhC--C
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGI--TD-F--INPATCGDKTVSQVIKEMTD--G  253 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga--~~-v--~~~~~~~~~~~~~~i~~~~~--g  253 (371)
                      +++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++++.  .. .  .|-.+  ..+..+.+.+...  +
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g   84 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTD--LAAMQAAAEEAVERFG   84 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCC--HHHHHHHHHHHHHHcC
Confidence            5789999998 9999999999999999 899999988876654 33442  11 1  23222  1222233333222  3


Q ss_pred             CcCEEEECCCC
Q 017457          254 GADYCFECIGL  264 (371)
Q Consensus       254 g~d~vid~~g~  264 (371)
                      .+|+++++.|.
T Consensus        85 ~id~vI~nAG~   95 (296)
T PRK05872         85 GIDVVVANAGI   95 (296)
T ss_pred             CCCEEEECCCc
Confidence            79999999884

>PRK09186 flagellin modification protein A; Provisional

Probab=96.40  E-value=0.053  Score=48.35  Aligned_cols=78  Identities=18%  Similarity=0.316  Sum_probs=50.7

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-Hh----Ccc--eE--EcCCCCCCccHHHHHHHhhC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF----GIT--DF--INPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~l----ga~--~v--~~~~~~~~~~~~~~i~~~~~  252 (371)
                      +++++||+|+ |++|...+..+...|+ +|+++.+++++.+.+. ++    +..  .+  .|-.+  ...+.+.+.+...
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~   79 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITD--QESLEEFLSKSAE   79 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCC--HHHHHHHHHHHHH
Confidence            5789999998 9999999998888999 8999998887765432 22    221  11  23222  1223333333222


Q ss_pred             --CCcCEEEECCC
Q 017457          253 --GGADYCFECIG  263 (371)
Q Consensus       253 --gg~d~vid~~g  263 (371)
                        +++|+++++.+
T Consensus        80 ~~~~id~vi~~A~   92 (256)
T PRK09186         80 KYGKIDGAVNCAY   92 (256)
T ss_pred             HcCCccEEEECCc
Confidence              26899998875

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.38  E-value=0.022  Score=50.57  Aligned_cols=81  Identities=16%  Similarity=0.176  Sum_probs=51.4

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hC--cc-eEEcCCCCCCccHHHHHHHhhC--CCc
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FG--IT-DFINPATCGDKTVSQVIKEMTD--GGA  255 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lg--a~-~v~~~~~~~~~~~~~~i~~~~~--gg~  255 (371)
                      +++++||+|+ |++|...++.+...|+ +|+++++++++.+.+.. +.  .. .++..+-.+..++...+.+...  +.+
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   82 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV   82 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4679999998 9999999988888899 89999999877655432 22  11 1221111111233333332211  278


Q ss_pred             CEEEECCCC
Q 017457          256 DYCFECIGL  264 (371)
Q Consensus       256 d~vid~~g~  264 (371)
                      |++|++.|.
T Consensus        83 d~vi~~ag~   91 (251)
T PRK07231         83 DILVNNAGT   91 (251)
T ss_pred             CEEEECCCC
Confidence            999998874

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.37  E-value=0.022  Score=51.59  Aligned_cols=80  Identities=15%  Similarity=0.170  Sum_probs=49.1

Q ss_pred             CCCeEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HHhCcceEEcCCCCCCccHHHHHHHhhC--C
Q 017457          183 VGSTVAIFGL-G--AVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITDFINPATCGDKTVSQVIKEMTD--G  253 (371)
Q Consensus       183 ~g~~VLI~G~-g--~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~~v~~~~~~~~~~~~~~i~~~~~--g  253 (371)
                      +++++||+|+ +  ++|.+.++.+...|+ +|++++++++..+.+    +++|....+..+-.+.++..+.+.+...  +
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g   84 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWG   84 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            5789999998 4  899999988888999 898888765332222    2345332222111111223333333322  3


Q ss_pred             CcCEEEECCC
Q 017457          254 GADYCFECIG  263 (371)
Q Consensus       254 g~d~vid~~g  263 (371)
                      .+|+++++.|
T Consensus        85 ~iD~lVnnAG   94 (271)
T PRK06505         85 KLDFVVHAIG   94 (271)
T ss_pred             CCCEEEECCc
Confidence            7999999887

>PRK06841 short chain dehydrogenase; Provisional

Probab=96.36  E-value=0.022  Score=50.89  Aligned_cols=81  Identities=16%  Similarity=0.202  Sum_probs=51.3

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcce--EEcCCCCCCccHHHHHHHhhC--CCcCE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD--FINPATCGDKTVSQVIKEMTD--GGADY  257 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~--v~~~~~~~~~~~~~~i~~~~~--gg~d~  257 (371)
                      +++++||+|+ |++|...++.+...|+ +|+.++++++..+...++....  .+..+-.+.+++.+.+.+...  +++|+
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   92 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI   92 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4789999998 9999998888888999 8999998877555444432211  222111111222222222221  27899


Q ss_pred             EEECCCC
Q 017457          258 CFECIGL  264 (371)
Q Consensus       258 vid~~g~  264 (371)
                      ++++.|.
T Consensus        93 vi~~ag~   99 (255)
T PRK06841         93 LVNSAGV   99 (255)
T ss_pred             EEECCCC
Confidence            9998874

>PRK06180 short chain dehydrogenase; Provisional

Probab=96.36  E-value=0.022  Score=51.74  Aligned_cols=79  Identities=15%  Similarity=0.102  Sum_probs=52.6

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcc--eEE--cCCCCCCccHHHHHHHhhC--CCc
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT--DFI--NPATCGDKTVSQVIKEMTD--GGA  255 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~--~v~--~~~~~~~~~~~~~i~~~~~--gg~  255 (371)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+....  ..+  |..+  .+...+.+.....  +++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~~~~   79 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTD--FDAIDAVVADAEATFGPI   79 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCC--HHHHHHHHHHHHHHhCCC
Confidence            3678999998 9999999998888999 899999998877666553221  122  2222  1222222332222  268


Q ss_pred             CEEEECCCC
Q 017457          256 DYCFECIGL  264 (371)
Q Consensus       256 d~vid~~g~  264 (371)
                      |+++++.|.
T Consensus        80 d~vv~~ag~   88 (277)
T PRK06180         80 DVLVNNAGY   88 (277)
T ss_pred             CEEEECCCc
Confidence            999998875

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=96.35  E-value=0.039  Score=46.98  Aligned_cols=96  Identities=17%  Similarity=0.191  Sum_probs=61.5

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHHHHHHhhCCCc
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTDGGA  255 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~~~gg~  255 (371)
                      ++++.+||-+|+|. |..++.+++.. +. +|++++.+++..+.+++    .+.+.+ ....   .+..+ +. . .+.+
T Consensus        43 l~~g~~VLDiGcGt-G~~al~la~~~~~~-~V~giD~s~~~l~~A~~~~~~~~l~~i-~~~~---~d~~~-~~-~-~~~f  113 (187)
T PRK00107         43 LPGGERVLDVGSGA-GFPGIPLAIARPEL-KVTLVDSLGKKIAFLREVAAELGLKNV-TVVH---GRAEE-FG-Q-EEKF  113 (187)
T ss_pred             cCCCCeEEEEcCCC-CHHHHHHHHHCCCC-eEEEEeCcHHHHHHHHHHHHHcCCCCE-EEEe---ccHhh-CC-C-CCCc
Confidence            55689999999865 66666666654 45 99999999887766543    454321 1111   12211 11 1 2379


Q ss_pred             CEEEEC-CCC-hHHHHHHHHHhhcCCceEEEEC
Q 017457          256 DYCFEC-IGL-TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       256 d~vid~-~g~-~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      |+|+.. ... ...++.+.+.|+++ |+++.+-
T Consensus       114 DlV~~~~~~~~~~~l~~~~~~LkpG-G~lv~~~  145 (187)
T PRK00107        114 DVVTSRAVASLSDLVELCLPLLKPG-GRFLALK  145 (187)
T ss_pred             cEEEEccccCHHHHHHHHHHhcCCC-eEEEEEe
Confidence            999953 222 24477889999998 9988773

>PRK07831 short chain dehydrogenase; Provisional

Probab=96.35  E-value=0.027  Score=50.61  Aligned_cols=81  Identities=21%  Similarity=0.327  Sum_probs=52.6

Q ss_pred             CCCCCeEEEEcC-C-hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-----hCcceE--E--cCCCCCCccHHHHHHH
Q 017457          181 VEVGSTVAIFGL-G-AVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-----FGITDF--I--NPATCGDKTVSQVIKE  249 (371)
Q Consensus       181 ~~~g~~VLI~G~-g-~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-----lga~~v--~--~~~~~~~~~~~~~i~~  249 (371)
                      +.+++++||+|+ | ++|.+.++.+...|+ +|+++++++++.+...+     ++...+  +  |..+  ..+..+.+..
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~   90 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTS--EAQVDALIDA   90 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCC--HHHHHHHHHH
Confidence            456789999997 6 799999999999999 89999888776654432     343222  2  3222  1122222222


Q ss_pred             hh--CCCcCEEEECCCC
Q 017457          250 MT--DGGADYCFECIGL  264 (371)
Q Consensus       250 ~~--~gg~d~vid~~g~  264 (371)
                      ..  .+.+|+++++.|.
T Consensus        91 ~~~~~g~id~li~~ag~  107 (262)
T PRK07831         91 AVERLGRLDVLVNNAGL  107 (262)
T ss_pred             HHHHcCCCCEEEECCCC
Confidence            21  1378999999884

>PRK06196 oxidoreductase; Provisional

Probab=96.34  E-value=0.025  Score=52.47  Aligned_cols=78  Identities=17%  Similarity=0.184  Sum_probs=50.9

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhCcceEE--cCCCCCCccHHHHHHHhhC--CCcC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFI--NPATCGDKTVSQVIKEMTD--GGAD  256 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga~~v~--~~~~~~~~~~~~~i~~~~~--gg~d  256 (371)
                      .+++|||+|+ |++|.+.+..+...|+ +|++++++.++.+.+. ++..-.++  |-.+  ..+..+.+.+...  +++|
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d--~~~v~~~~~~~~~~~~~iD  101 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLAD--LESVRAFAERFLDSGRRID  101 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCC--HHHHHHHHHHHHhcCCCCC
Confidence            5789999998 9999999988888999 8999999887665432 22211222  2222  1222222333222  3799


Q ss_pred             EEEECCC
Q 017457          257 YCFECIG  263 (371)
Q Consensus       257 ~vid~~g  263 (371)
                      +++++.|
T Consensus       102 ~li~nAg  108 (315)
T PRK06196        102 ILINNAG  108 (315)
T ss_pred             EEEECCC
Confidence            9999887

>PRK06500 short chain dehydrogenase; Provisional

Probab=96.33  E-value=0.027  Score=49.99  Aligned_cols=81  Identities=20%  Similarity=0.257  Sum_probs=51.9

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCcce-EEcCCCCCCccHHHHHHHhh--CCCcCE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITD-FINPATCGDKTVSQVIKEMT--DGGADY  257 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~~-v~~~~~~~~~~~~~~i~~~~--~gg~d~  257 (371)
                      +++++||+|+ |++|...++.+...|+ +|+++++++++.+.+ ++++... .+..+-.+..+....+....  .+++|+
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDA   83 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4789999998 9999999999999999 899999887765544 3355431 22211101122222222222  137899


Q ss_pred             EEECCCC
Q 017457          258 CFECIGL  264 (371)
Q Consensus       258 vid~~g~  264 (371)
                      ++++.|.
T Consensus        84 vi~~ag~   90 (249)
T PRK06500         84 VFINAGV   90 (249)
T ss_pred             EEECCCC
Confidence            9998773

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.32  E-value=0.034  Score=50.39  Aligned_cols=94  Identities=18%  Similarity=0.249  Sum_probs=65.8

Q ss_pred             ccccchhhhHHHHHHHcC-CCCCCeEEEEcCCh-HHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCC
Q 017457          163 LLSCGVSTGVGAAWKVAG-VEVGSTVAIFGLGA-VGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD  240 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~-~~~g~~VLI~G~g~-~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~  240 (371)
                      .+||+...... +.+..+ --.|++|+|+|.|. +|...+.++...|+ +|+++.+..                      
T Consensus       137 ~~PcTp~ai~~-ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t----------------------  192 (286)
T PRK14175        137 FVPCTPLGIME-ILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRS----------------------  192 (286)
T ss_pred             CCCCcHHHHHH-HHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc----------------------
Confidence            45665555544 333333 35799999999855 99999999999999 888887432                      


Q ss_pred             ccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECcc
Q 017457          241 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       241 ~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      .++.+.++     .+|+||.++|.+..+..  +.++++ ..++++|..
T Consensus       193 ~~l~~~~~-----~ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~  232 (286)
T PRK14175        193 KDMASYLK-----DADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNT  232 (286)
T ss_pred             hhHHHHHh-----hCCEEEECCCCCcccCH--HHcCCC-cEEEEcCCC
Confidence            12222222     58999999998864444  457887 889999874

>PRK08339 short chain dehydrogenase; Provisional

Probab=96.32  E-value=0.031  Score=50.39  Aligned_cols=103  Identities=17%  Similarity=0.270  Sum_probs=65.0

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-h----Ccc-eEE--cCCCCCCccHHHHHHHhh-C
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F----GIT-DFI--NPATCGDKTVSQVIKEMT-D  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l----ga~-~v~--~~~~~~~~~~~~~i~~~~-~  252 (371)
                      +++++||+|+ +++|.+.++.+...|+ +|++++++.++.+.+.+ +    +.+ ..+  |-.+  ..+..+.+.+.. -
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~i~~~~~~~~~~   83 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTK--REDLERTVKELKNI   83 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC--HHHHHHHHHHHHhh
Confidence            5789999998 9999999999988999 89999998877655432 2    322 122  3222  122333333322 1


Q ss_pred             CCcCEEEECCCChH-------------------------HHHHHHHHhhc-CCceEEEECcc
Q 017457          253 GGADYCFECIGLTS-------------------------VMNDAFNSSRE-GWGKTVILGVE  288 (371)
Q Consensus       253 gg~d~vid~~g~~~-------------------------~~~~~~~~l~~-~~G~~v~~g~~  288 (371)
                      +++|+++++.|...                         ..+.+++.+.. ++|+++.++..
T Consensus        84 g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~  145 (263)
T PRK08339         84 GEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSV  145 (263)
T ss_pred             CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCc
Confidence            37899999887410                         13455566643 23789888763

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=96.32  E-value=0.0094  Score=51.69  Aligned_cols=100  Identities=19%  Similarity=0.286  Sum_probs=65.6

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCC-eEEEEcCChhHHHHH----HHhCcceE--EcCCCCCCccHHHHH
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRAS-KIIGVDINPEKFEIG----KKFGITDF--INPATCGDKTVSQVI  247 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~-~Vi~~~~~~~~~~~~----~~lga~~v--~~~~~~~~~~~~~~i  247 (371)
                      +.+...+++|++||-+|+|. |..++.+|+..|.. +|+.++..++-.+.+    ..++.+.+  +..+.      .   
T Consensus        64 ~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg------~---  133 (209)
T PF01135_consen   64 MLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDG------S---  133 (209)
T ss_dssp             HHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-G------G---
T ss_pred             HHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcch------h---
Confidence            45667799999999999876 88888888887742 689999888654444    44565432  22211      1   


Q ss_pred             HHhhC-CCcCEEEECCCChHHHHHHHHHhhcCCceEEEE
Q 017457          248 KEMTD-GGADYCFECIGLTSVMNDAFNSSREGWGKTVIL  285 (371)
Q Consensus       248 ~~~~~-gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~  285 (371)
                      .-+.. +.||.++-+.+-+..-...++.|+++ |+++.-
T Consensus       134 ~g~~~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~p  171 (209)
T PF01135_consen  134 EGWPEEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAP  171 (209)
T ss_dssp             GTTGGG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEE
T ss_pred             hccccCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEE
Confidence            11112 27999998777666567899999998 998874

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>PRK07062 short chain dehydrogenase; Provisional

Probab=96.32  E-value=0.024  Score=51.00  Aligned_cols=79  Identities=18%  Similarity=0.190  Sum_probs=51.5

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----h--Ccc-eE--EcCCCCCCccHHHHHHHhhC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----F--GIT-DF--INPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----l--ga~-~v--~~~~~~~~~~~~~~i~~~~~  252 (371)
                      .++++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+.+    .  +.. ..  .|-.+  .++..+.+.+...
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~   83 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLD--EADVAAFAAAVEA   83 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCC--HHHHHHHHHHHHH
Confidence            5789999998 9999999999988999 89999998876654322    1  111 11  23222  1222222333222


Q ss_pred             --CCcCEEEECCCC
Q 017457          253 --GGADYCFECIGL  264 (371)
Q Consensus       253 --gg~d~vid~~g~  264 (371)
                        +.+|+++++.|.
T Consensus        84 ~~g~id~li~~Ag~   97 (265)
T PRK07062         84 RFGGVDMLVNNAGQ   97 (265)
T ss_pred             hcCCCCEEEECCCC
Confidence              378999999873

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=96.31  E-value=0.03  Score=49.69  Aligned_cols=81  Identities=15%  Similarity=0.227  Sum_probs=50.4

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--HHHHHHHhCcc-eEEcCCCCCCccHHHHHHHhhC--CCcC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE--KFEIGKKFGIT-DFINPATCGDKTVSQVIKEMTD--GGAD  256 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~--~~~~~~~lga~-~v~~~~~~~~~~~~~~i~~~~~--gg~d  256 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|++++++..  ..+.+++.+.. .++..+-.+..++...+.+...  +++|
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   82 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID   82 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999998 9999999888888999 8999987652  22333444432 2222111111233333333322  3689


Q ss_pred             EEEECCCC
Q 017457          257 YCFECIGL  264 (371)
Q Consensus       257 ~vid~~g~  264 (371)
                      +++++.|.
T Consensus        83 ~li~~ag~   90 (248)
T TIGR01832        83 ILVNNAGI   90 (248)
T ss_pred             EEEECCCC
Confidence            99998764

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.29  E-value=0.072  Score=46.89  Aligned_cols=92  Identities=23%  Similarity=0.223  Sum_probs=60.3

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCC--eEEEEcCC----hhH--------HHHHHHhCcceEEcCCCCCCccHHHHH
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRAS--KIIGVDIN----PEK--------FEIGKKFGITDFINPATCGDKTVSQVI  247 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~--~Vi~~~~~----~~~--------~~~~~~lga~~v~~~~~~~~~~~~~~i  247 (371)
                      -++++++|+|+|+.|.+.+..+...|++  ++++++++    .++        .++++.++... .   .   .++.+.+
T Consensus        23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~---~---~~l~~~l   95 (226)
T cd05311          23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T---G---GTLKEAL   95 (226)
T ss_pred             ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c---c---CCHHHHH
Confidence            5678999999999999999988889997  89999988    443        22333333211 0   0   1333333


Q ss_pred             HHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEEC
Q 017457          248 KEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       248 ~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      .     ++|++|++++....-...++.+.++ ..++.+.
T Consensus        96 ~-----~~dvlIgaT~~G~~~~~~l~~m~~~-~ivf~ls  128 (226)
T cd05311          96 K-----GADVFIGVSRPGVVKKEMIKKMAKD-PIVFALA  128 (226)
T ss_pred             h-----cCCEEEeCCCCCCCCHHHHHhhCCC-CEEEEeC
Confidence            2     5899999997433224666777775 5555544

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences

Probab=96.28  E-value=0.021  Score=52.12  Aligned_cols=94  Identities=22%  Similarity=0.378  Sum_probs=58.5

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCc-ceE-EcCCCCCCccHHHHHHHhhCCC
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI-TDF-INPATCGDKTVSQVIKEMTDGG  254 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga-~~v-~~~~~~~~~~~~~~i~~~~~gg  254 (371)
                      ..+|++||=+|+|. |.+++..+| +|+++|++++.++...+.+++    -|. +.+ +....    +..       .+.
T Consensus       159 ~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~----~~~-------~~~  225 (295)
T PF06325_consen  159 VKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSE----DLV-------EGK  225 (295)
T ss_dssp             SSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTS----CTC-------CS-
T ss_pred             ccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEec----ccc-------ccc
Confidence            67889999998755 566555444 599899999998877666554    232 122 21111    111       148


Q ss_pred             cCEEEECCCChH---HHHHHHHHhhcCCceEEEECcc
Q 017457          255 ADYCFECIGLTS---VMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       255 ~d~vid~~g~~~---~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      ||+|+-..-...   .+..+.+.++++ |.+++.|..
T Consensus       226 ~dlvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSGIl  261 (295)
T PF06325_consen  226 FDLVVANILADVLLELAPDIASLLKPG-GYLILSGIL  261 (295)
T ss_dssp             EEEEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEEEE
T ss_pred             CCEEEECCCHHHHHHHHHHHHHhhCCC-CEEEEcccc
Confidence            999995544333   245566678897 999998874

Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.28  E-value=0.031  Score=45.80  Aligned_cols=96  Identities=23%  Similarity=0.156  Sum_probs=61.4

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      .++++++|+|+|.+|...++.+...|..+|++.+++.++.+.+ ++++... +....   .+..+.     -.++|+|+.
T Consensus        17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-~~~~~---~~~~~~-----~~~~Dvvi~   87 (155)
T cd01065          17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-IAIAY---LDLEEL-----LAEADLIIN   87 (155)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-cceee---cchhhc-----cccCCEEEe
Confidence            4578999999999999998888888643899999988876654 4455421 00000   111111     137999999


Q ss_pred             CCCChHH----HHHHHHHhhcCCceEEEECc
Q 017457          261 CIGLTSV----MNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       261 ~~g~~~~----~~~~~~~l~~~~G~~v~~g~  287 (371)
                      |++....    .......++++ ..+++++.
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~-~~v~D~~~  117 (155)
T cd01065          88 TTPVGMKPGDELPLPPSLLKPG-GVVYDVVY  117 (155)
T ss_pred             CcCCCCCCCCCCCCCHHHcCCC-CEEEEcCc
Confidence            9886541    11222446665 67777765

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=96.28  E-value=0.062  Score=47.87  Aligned_cols=81  Identities=20%  Similarity=0.275  Sum_probs=50.8

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eEEcCCCCCCccHHHHHHHhhC--CC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--GG  254 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~~~~~~~~~~~~~~i~~~~~--gg  254 (371)
                      +++++||+|+ |.+|...+..+...|+ +|+++++++++.+.+..    .+.. +++.-+-.+..+..+.+.....  ++
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG   81 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999997 9999999998888899 89999988876554322    2322 1222111111222222222221  37


Q ss_pred             cCEEEECCCC
Q 017457          255 ADYCFECIGL  264 (371)
Q Consensus       255 ~d~vid~~g~  264 (371)
                      +|++|.+.+.
T Consensus        82 ~d~vi~~a~~   91 (258)
T PRK12429         82 VDILVNNAGI   91 (258)
T ss_pred             CCEEEECCCC
Confidence            8999988863

>PRK08263 short chain dehydrogenase; Provisional

Probab=96.27  E-value=0.061  Score=48.72  Aligned_cols=80  Identities=14%  Similarity=0.126  Sum_probs=50.8

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcc-eEEcCCCCCCccHHHHHHHhhC--CCcCEE
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT-DFINPATCGDKTVSQVIKEMTD--GGADYC  258 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~-~v~~~~~~~~~~~~~~i~~~~~--gg~d~v  258 (371)
                      +++|||+|+ |++|...+..+...|+ +|+.+++++++.+.+.+ ++.. ..+..+-.+.+.+.+.+.....  +++|++
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV   81 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            568999998 9999999888888898 89999998877665544 2221 2222111011222222222221  378999


Q ss_pred             EECCCC
Q 017457          259 FECIGL  264 (371)
Q Consensus       259 id~~g~  264 (371)
                      +++.|.
T Consensus        82 i~~ag~   87 (275)
T PRK08263         82 VNNAGY   87 (275)
T ss_pred             EECCCC
Confidence            999874

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=96.27  E-value=0.091  Score=46.29  Aligned_cols=79  Identities=23%  Similarity=0.294  Sum_probs=51.0

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HHhCcce-E--EcCCCCCCccHHHHHHHhhC--
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-F--INPATCGDKTVSQVIKEMTD--  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~~--  252 (371)
                      +++++||+|+ |.+|...+..+...|+ +|+++.+++++.+.+    +..+... +  .|..+  ...+.+.+.+...  
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   80 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSD--EAAVRALIEAAVEAF   80 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHh
Confidence            3578999998 9999999988888899 799999988765443    2234321 2  23222  1223333333221  


Q ss_pred             CCcCEEEECCCC
Q 017457          253 GGADYCFECIGL  264 (371)
Q Consensus       253 gg~d~vid~~g~  264 (371)
                      +.+|.++++.|.
T Consensus        81 ~~id~vi~~ag~   92 (246)
T PRK05653         81 GALDILVNNAGI   92 (246)
T ss_pred             CCCCEEEECCCc
Confidence            268999998864

>PRK07478 short chain dehydrogenase; Provisional

Probab=96.26  E-value=0.03  Score=50.00  Aligned_cols=79  Identities=18%  Similarity=0.182  Sum_probs=51.3

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcc-eEE--cCCCCCCccHHHHHHHhhC--
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFI--NPATCGDKTVSQVIKEMTD--  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~-~v~--~~~~~~~~~~~~~i~~~~~--  252 (371)
                      +++++||+|+ |++|.+.+..+...|+ +|+.+++++++.+.+.    +.+.+ .++  |-.+  ..+..+.+.+...  
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   81 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRD--EAYAKALVALAVERF   81 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHhc
Confidence            4689999998 9999999988888999 8999998887765542    23322 122  2222  1222222232222  


Q ss_pred             CCcCEEEECCCC
Q 017457          253 GGADYCFECIGL  264 (371)
Q Consensus       253 gg~d~vid~~g~  264 (371)
                      +.+|+++++.|.
T Consensus        82 ~~id~li~~ag~   93 (254)
T PRK07478         82 GGLDIAFNNAGT   93 (254)
T ss_pred             CCCCEEEECCCC
Confidence            378999998873

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=96.23  E-value=0.029  Score=51.10  Aligned_cols=96  Identities=17%  Similarity=0.058  Sum_probs=62.5

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      ..+++++|+|+|++|.+++..+...|+.+|+++.++.++.+.+.+ ++....+.. .   .+..+.+     ..+|+|++
T Consensus       121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~---~~~~~~~-----~~~DivIn  191 (278)
T PRK00258        121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-D---LELQEEL-----ADFDLIIN  191 (278)
T ss_pred             CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-c---ccchhcc-----ccCCEEEE
Confidence            457899999999999999999999996699999999888766543 332110111 0   0110111     26899999


Q ss_pred             CCCChHH-----HHHHHHHhhcCCceEEEECc
Q 017457          261 CIGLTSV-----MNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       261 ~~g~~~~-----~~~~~~~l~~~~G~~v~~g~  287 (371)
                      +++....     .......+++. ..++++-.
T Consensus       192 aTp~g~~~~~~~~~~~~~~l~~~-~~v~DivY  222 (278)
T PRK00258        192 ATSAGMSGELPLPPLPLSLLRPG-TIVYDMIY  222 (278)
T ss_pred             CCcCCCCCCCCCCCCCHHHcCCC-CEEEEeec
Confidence            9885431     01233566776 77777754

>PRK06484 short chain dehydrogenase; Validated

Probab=96.22  E-value=0.068  Score=53.23  Aligned_cols=103  Identities=21%  Similarity=0.239  Sum_probs=67.6

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcce-E--EcCCCCCCccHHHHHHHhhC--CC
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITD-F--INPATCGDKTVSQVIKEMTD--GG  254 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~-v--~~~~~~~~~~~~~~i~~~~~--gg  254 (371)
                      ..++++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+.+ ++... .  .|-.+  .++..+.+.+...  +.
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~  343 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITD--EAAVESAFAQIQARWGR  343 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCC--HHHHHHHHHHHHHHcCC
Confidence            46789999998 9999999998888999 99999998887776544 44332 1  23222  1223333333322  36


Q ss_pred             cCEEEECCCChH--------------------------HHHHHHHHhhcCCceEEEECcc
Q 017457          255 ADYCFECIGLTS--------------------------VMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       255 ~d~vid~~g~~~--------------------------~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      +|++|++.|...                          ..+.++..+..+ |+++.++..
T Consensus       344 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~iv~isS~  402 (520)
T PRK06484        344 LDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQG-GVIVNLGSI  402 (520)
T ss_pred             CCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccC-CEEEEECch
Confidence            899999877310                          134445566565 899988763

>PRK07904 short chain dehydrogenase; Provisional

Probab=96.22  E-value=0.037  Score=49.58  Aligned_cols=83  Identities=22%  Similarity=0.304  Sum_probs=50.3

Q ss_pred             CCCCCeEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCChhH-HHH----HHHhCc-c-eEEcCCCCCCccHHHHHHHhh
Q 017457          181 VEVGSTVAIFGL-GAVGLAVAEGARLN-RASKIIGVDINPEK-FEI----GKKFGI-T-DFINPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       181 ~~~g~~VLI~G~-g~~G~~ai~la~~~-g~~~Vi~~~~~~~~-~~~----~~~lga-~-~v~~~~~~~~~~~~~~i~~~~  251 (371)
                      +..+++|||+|+ |++|.+.++-+... |+ +|+++++++++ .+.    ++..+. + +++..+-.+..+..+.+.+..
T Consensus         5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   83 (253)
T PRK07904          5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAF   83 (253)
T ss_pred             cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHH
Confidence            457789999998 99999988776666 58 89999888764 333    233332 1 233222111123333333332


Q ss_pred             C-CCcCEEEECCCC
Q 017457          252 D-GGADYCFECIGL  264 (371)
Q Consensus       252 ~-gg~d~vid~~g~  264 (371)
                      . ++.|+++++.|.
T Consensus        84 ~~g~id~li~~ag~   97 (253)
T PRK07904         84 AGGDVDVAIVAFGL   97 (253)
T ss_pred             hcCCCCEEEEeeec
Confidence            2 479999877654

>PRK07576 short chain dehydrogenase; Provisional

Probab=96.21  E-value=0.034  Score=50.08  Aligned_cols=79  Identities=16%  Similarity=0.185  Sum_probs=51.1

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcc-eEE--cCCCCCCccHHHHHHHhhC-
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFI--NPATCGDKTVSQVIKEMTD-  252 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~-~v~--~~~~~~~~~~~~~i~~~~~-  252 (371)
                      .+++++||+|+ |++|...++.+...|+ +|+++++++++.+...    +.+.. .++  |..+  ..+....+.+... 
T Consensus         7 ~~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~i~~~~~~~~~~   83 (264)
T PRK07576          7 FAGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRD--YAAVEAAFAQIADE   83 (264)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCC--HHHHHHHHHHHHHH
Confidence            35789999998 9999999998888999 8999998877654332    22322 122  3222  1223333333322 


Q ss_pred             -CCcCEEEECCC
Q 017457          253 -GGADYCFECIG  263 (371)
Q Consensus       253 -gg~d~vid~~g  263 (371)
                       +++|++|++.+
T Consensus        84 ~~~iD~vi~~ag   95 (264)
T PRK07576         84 FGPIDVLVSGAA   95 (264)
T ss_pred             cCCCCEEEECCC
Confidence             36899998775

>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]

Probab=96.20  E-value=0.031  Score=50.32  Aligned_cols=131  Identities=19%  Similarity=0.132  Sum_probs=86.9

Q ss_pred             cCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCC--------CCccHHHHHHHh
Q 017457          179 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATC--------GDKTVSQVIKEM  250 (371)
Q Consensus       179 ~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~--------~~~~~~~~i~~~  250 (371)
                      +.-.++..+|+.|.|..|++++..++.+|+ .|...+..+.+.+..+.+|+..+--.++.        -.++|...-.++
T Consensus       159 agtv~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~  237 (356)
T COG3288         159 AGTVSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAEL  237 (356)
T ss_pred             cccccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHH
Confidence            344567789999999999999999999999 88888888888888888887532111111        123344443343


Q ss_pred             hCC---CcCEEEECC--CCh----HHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc--CceEEEee
Q 017457          251 TDG---GADYCFECI--GLT----SVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK--GRSVCGTY  311 (371)
Q Consensus       251 ~~g---g~d~vid~~--g~~----~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~--~~~~~g~~  311 (371)
                      ...   ++|+||-+.  ++.    .....++..|+|+ ..++++....++...-..+.....  +++++|..
T Consensus       238 ~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpG-SViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~  308 (356)
T COG3288         238 VAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPG-SVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYT  308 (356)
T ss_pred             HHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCC-cEEEEehhhcCCCcccccCCeEEEeCCeEEEeec
Confidence            332   899999653  332    2357889999998 999999875444321111122222  68888864

>PLN02366 spermidine synthase

Probab=96.20  E-value=0.071  Score=49.15  Aligned_cols=98  Identities=18%  Similarity=0.213  Sum_probs=63.4

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh-Cc------c---eEEcCCCCCCccHHHHHHHh
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GI------T---DFINPATCGDKTVSQVIKEM  250 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l-ga------~---~v~~~~~~~~~~~~~~i~~~  250 (371)
                      ..+.++|||+|+|. |.++..+++.-+..+|.+++.+++-.+.+++. ..      +   .++.      .+..+.+++.
T Consensus        89 ~~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~------~Da~~~l~~~  161 (308)
T PLN02366         89 IPNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHI------GDGVEFLKNA  161 (308)
T ss_pred             CCCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEE------ChHHHHHhhc
Confidence            35678999999866 55667788877666899999888767766662 11      1   1111      2333334433


Q ss_pred             hCCCcCEEE-ECCC---------ChHHHHHHHHHhhcCCceEEEEC
Q 017457          251 TDGGADYCF-ECIG---------LTSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       251 ~~gg~d~vi-d~~g---------~~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      .++.+|+|| |+..         ....++.+.++|+++ |.++.-+
T Consensus       162 ~~~~yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~  206 (308)
T PLN02366        162 PEGTYDAIIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQA  206 (308)
T ss_pred             cCCCCCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECc
Confidence            334799998 4432         112377889999998 9987543

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.19  E-value=0.051  Score=49.54  Aligned_cols=45  Identities=22%  Similarity=0.202  Sum_probs=38.2

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK  226 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~  226 (371)
                      .++++++|+|+|+.+.+++.-+..+|+++++++.++.+|.+.+.+
T Consensus       125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~  169 (283)
T PRK14027        125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALAD  169 (283)
T ss_pred             cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHH
Confidence            457899999999999998888888999899999999888766543

>PRK07454 short chain dehydrogenase; Provisional

Probab=96.18  E-value=0.042  Score=48.59  Aligned_cols=82  Identities=16%  Similarity=0.147  Sum_probs=51.9

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eEEcCCCCCCccHHHHHHHhhC--C
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--G  253 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~~~~~~~~~~~~~~i~~~~~--g  253 (371)
                      ..++++||+|+ |++|...+..+...|+ +|+++++++++.+.+.+    .+.. .++..+-.+.+...+.+.....  +
T Consensus         4 ~~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (241)
T PRK07454          4 NSMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFG   82 (241)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            45678999997 9999999999988999 89999998876554432    2222 1222111011222233333222  2


Q ss_pred             CcCEEEECCCC
Q 017457          254 GADYCFECIGL  264 (371)
Q Consensus       254 g~d~vid~~g~  264 (371)
                      +.|+++++.|.
T Consensus        83 ~id~lv~~ag~   93 (241)
T PRK07454         83 CPDVLINNAGM   93 (241)
T ss_pred             CCCEEEECCCc
Confidence            68999998874

>PLN02780 ketoreductase/ oxidoreductase

Probab=96.18  E-value=0.032  Score=51.90  Aligned_cols=79  Identities=18%  Similarity=0.188  Sum_probs=52.2

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-h----C-cc---eEEcCCCCCCccHHHHHHHhhC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F----G-IT---DFINPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l----g-a~---~v~~~~~~~~~~~~~~i~~~~~  252 (371)
                      .|+++||+|+ +++|.+.+..+...|+ +|+.+++++++.+.+.+ +    + ..   ...|-.+ +..+..+.+.+..+
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~l~~~~~  129 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG-DIDEGVKRIKETIE  129 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC-CcHHHHHHHHHHhc
Confidence            5899999998 9999998887777899 89999999988765432 1    1 11   1223221 11233444544444


Q ss_pred             C-CcCEEEECCC
Q 017457          253 G-GADYCFECIG  263 (371)
Q Consensus       253 g-g~d~vid~~g  263 (371)
                      + .+|+++++.|
T Consensus       130 ~~didilVnnAG  141 (320)
T PLN02780        130 GLDVGVLINNVG  141 (320)
T ss_pred             CCCccEEEEecC
Confidence            4 5679998776

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=96.17  E-value=0.041  Score=49.82  Aligned_cols=70  Identities=20%  Similarity=0.083  Sum_probs=50.7

Q ss_pred             CCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcceEEcCCCCCCccHHHHHHHhhCCCcCEE
Q 017457          180 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYC  258 (371)
Q Consensus       180 ~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~v  258 (371)
                      +...+++++|+|+|+.+.+++.-++.+|+.+|+++.++.++.+.+.+ ++..            +...+   ....+|++
T Consensus       118 ~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~------------~~~~~---~~~~~dlv  182 (272)
T PRK12550        118 QVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE------------WRPDL---GGIEADIL  182 (272)
T ss_pred             CCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc------------chhhc---ccccCCEE
Confidence            44456799999999999999998999999789999999988776543 3311            10011   11258999


Q ss_pred             EECCCC
Q 017457          259 FECIGL  264 (371)
Q Consensus       259 id~~g~  264 (371)
                      +||++-
T Consensus       183 INaTp~  188 (272)
T PRK12550        183 VNVTPI  188 (272)
T ss_pred             EECCcc
Confidence            999873

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.17  E-value=0.066  Score=46.26  Aligned_cols=35  Identities=29%  Similarity=0.271  Sum_probs=31.4

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  217 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~  217 (371)
                      .+.+|+|+|+|++|...+..+..+|..+++.++.+
T Consensus        20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence            45789999999999999999999999899999865

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=96.16  E-value=0.0062  Score=55.17  Aligned_cols=98  Identities=16%  Similarity=0.259  Sum_probs=59.8

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc---eEEcCCCCCCccHHHHH
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVI  247 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~---~v~~~~~~~~~~~~~~i  247 (371)
                      +.+.+++++|++||-+|+|- |.++..+|+..|+ +|++++.+++..+.+++    .|..   .+..      .++    
T Consensus        54 ~~~~~~l~~G~~vLDiGcGw-G~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~------~D~----  121 (273)
T PF02353_consen   54 LCEKLGLKPGDRVLDIGCGW-GGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRL------QDY----  121 (273)
T ss_dssp             HHTTTT--TT-EEEEES-TT-SHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEE------S-G----
T ss_pred             HHHHhCCCCCCEEEEeCCCc-cHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE------eec----
Confidence            45678899999999999874 6777788888899 99999999988877654    4531   1221      122    


Q ss_pred             HHhhCCCcCEEEE-----CCCC---hHHHHHHHHHhhcCCceEEEEC
Q 017457          248 KEMTDGGADYCFE-----CIGL---TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       248 ~~~~~gg~d~vid-----~~g~---~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      +++.. .||.|+.     .+|.   +..++.+.+.|+|+ |+++.-.
T Consensus       122 ~~~~~-~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq~  166 (273)
T PF02353_consen  122 RDLPG-KFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQT  166 (273)
T ss_dssp             GG----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEEE
T ss_pred             cccCC-CCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEEe
Confidence            12222 7898875     3332   23478888999998 9886543

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=96.16  E-value=0.037  Score=49.40  Aligned_cols=79  Identities=22%  Similarity=0.332  Sum_probs=51.1

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcc-eEE--cCCCCCCccHHHHHHHhh--C
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFI--NPATCGDKTVSQVIKEMT--D  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~-~v~--~~~~~~~~~~~~~i~~~~--~  252 (371)
                      +++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.    +.|.. ..+  |..+  .++..+.+.+..  .
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   85 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTD--HDAVRAAIDAFEAEI   85 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCC--HHHHHHHHHHHHHhc
Confidence            5789999998 9999999998888899 8999998877654432    22322 122  3222  122322233222  1


Q ss_pred             CCcCEEEECCCC
Q 017457          253 GGADYCFECIGL  264 (371)
Q Consensus       253 gg~d~vid~~g~  264 (371)
                      +.+|++|++.|.
T Consensus        86 ~~~d~li~~ag~   97 (255)
T PRK07523         86 GPIDILVNNAGM   97 (255)
T ss_pred             CCCCEEEECCCC
Confidence            378999998874

>PRK08618 ornithine cyclodeaminase; Validated

Probab=96.16  E-value=0.12  Score=48.24  Aligned_cols=102  Identities=15%  Similarity=0.086  Sum_probs=68.1

Q ss_pred             CCCCeEEEEcCChHHHHHHHHH-HHcCCCeEEEEcCChhHHHHHHH-h----CcceEEcCCCCCCccHHHHHHHhhCCCc
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGA-RLNRASKIIGVDINPEKFEIGKK-F----GITDFINPATCGDKTVSQVIKEMTDGGA  255 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la-~~~g~~~Vi~~~~~~~~~~~~~~-l----ga~~v~~~~~~~~~~~~~~i~~~~~gg~  255 (371)
                      ...++++|+|+|..|.+.+..+ ...++++|.+..+++++.+.+.+ +    +.. +...     .++.+.+     ...
T Consensus       125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~-----~~~~~~~-----~~a  193 (325)
T PRK08618        125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVV-----NSADEAI-----EEA  193 (325)
T ss_pred             CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEe-----CCHHHHH-----hcC
Confidence            4567899999999998776544 46788899999999888765432 2    332 1111     1233333     268


Q ss_pred             CEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCH
Q 017457          256 DYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNS  298 (371)
Q Consensus       256 d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~  298 (371)
                      |+|+.|+++.. .-.. +.++++ -+++.+|.... ...+++.
T Consensus       194 DiVi~aT~s~~-p~i~-~~l~~G-~hV~~iGs~~p-~~~E~~~  232 (325)
T PRK08618        194 DIIVTVTNAKT-PVFS-EKLKKG-VHINAVGSFMP-DMQELPS  232 (325)
T ss_pred             CEEEEccCCCC-cchH-HhcCCC-cEEEecCCCCc-ccccCCH
Confidence            99999999776 3334 788886 88888887432 2344554

>PRK06128 oxidoreductase; Provisional

Probab=96.15  E-value=0.082  Score=48.63  Aligned_cols=101  Identities=18%  Similarity=0.177  Sum_probs=59.8

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--HH----HHHHHhCcce-EE--cCCCCCCccHHHHHHHhhC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE--KF----EIGKKFGITD-FI--NPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~--~~----~~~~~lga~~-v~--~~~~~~~~~~~~~i~~~~~  252 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|+++.++.+  +.    +.++..|... ++  |-.+  .....+.+.+...
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~  130 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKD--EAFCRQLVERAVK  130 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHHHHH
Confidence            5789999998 9999999888888999 8887765432  11    2233344322 22  2222  1222222222221


Q ss_pred             --CCcCEEEECCCCh--------------------------HHHHHHHHHhhcCCceEEEECc
Q 017457          253 --GGADYCFECIGLT--------------------------SVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       253 --gg~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                        +++|++|++.|..                          ...+.+++.+..+ |+++.++.
T Consensus       131 ~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~iv~~sS  192 (300)
T PRK06128        131 ELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPG-ASIINTGS  192 (300)
T ss_pred             HhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcC-CEEEEECC
Confidence              3799999988731                          0233444555666 89888875

>PRK07832 short chain dehydrogenase; Provisional

Probab=96.15  E-value=0.095  Score=47.36  Aligned_cols=77  Identities=16%  Similarity=0.225  Sum_probs=48.6

Q ss_pred             CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HHhCcce----EEcCCCCCCccHHHHHHHhhC--C
Q 017457          185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD----FINPATCGDKTVSQVIKEMTD--G  253 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~~----v~~~~~~~~~~~~~~i~~~~~--g  253 (371)
                      ++++|+|+ |++|...++.+...|+ +|+++++++++.+.+    +..+...    ..|-.+  .....+.+.+...  +
T Consensus         1 k~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~   77 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISD--YDAVAAFAADIHAAHG   77 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC--HHHHHHHHHHHHHhcC
Confidence            36899998 9999999998888999 899998887665443    2234321    133322  1122222222221  2


Q ss_pred             CcCEEEECCCC
Q 017457          254 GADYCFECIGL  264 (371)
Q Consensus       254 g~d~vid~~g~  264 (371)
                      ++|+++++.|.
T Consensus        78 ~id~lv~~ag~   88 (272)
T PRK07832         78 SMDVVMNIAGI   88 (272)
T ss_pred             CCCEEEECCCC
Confidence            68999998874

>PRK05875 short chain dehydrogenase; Provisional

Probab=96.14  E-value=0.037  Score=50.05  Aligned_cols=80  Identities=20%  Similarity=0.298  Sum_probs=50.5

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-Hh---C--cc-eEEcCCCCCCccHHHHHHHhhC--
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF---G--IT-DFINPATCGDKTVSQVIKEMTD--  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~l---g--a~-~v~~~~~~~~~~~~~~i~~~~~--  252 (371)
                      +++++||+|+ |++|...++.+...|+ +|+++++++++.+... ++   +  .. .++..+-.+..+..+.+.+...  
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH   84 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4689999998 9999999999999999 8999998876654332 22   1  11 2221111011223333333322  


Q ss_pred             CCcCEEEECCC
Q 017457          253 GGADYCFECIG  263 (371)
Q Consensus       253 gg~d~vid~~g  263 (371)
                      +++|++|++.|
T Consensus        85 ~~~d~li~~ag   95 (276)
T PRK05875         85 GRLHGVVHCAG   95 (276)
T ss_pred             CCCCEEEECCC
Confidence            27899999886

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.14  E-value=0.04  Score=48.95  Aligned_cols=80  Identities=21%  Similarity=0.263  Sum_probs=51.2

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcc-eEEcCCCCCCccHHHHHHHhhC--CC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GG  254 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~-~v~~~~~~~~~~~~~~i~~~~~--gg  254 (371)
                      +++++||+|+ |++|...++.+...|+ +|+++++++++.+.+.    ..+.. ..+..+-.+.....+.+.....  +.
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ   82 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4789999998 9999999999988999 8999998877655432    23433 1222211001222222333222  36


Q ss_pred             cCEEEECCC
Q 017457          255 ADYCFECIG  263 (371)
Q Consensus       255 ~d~vid~~g  263 (371)
                      +|.+|++.|
T Consensus        83 id~vi~~ag   91 (253)
T PRK08217         83 LNGLINNAG   91 (253)
T ss_pred             CCEEEECCC
Confidence            899999877

>PRK06953 short chain dehydrogenase; Provisional

Probab=96.14  E-value=0.036  Score=48.40  Aligned_cols=77  Identities=16%  Similarity=0.219  Sum_probs=51.8

Q ss_pred             CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcce-EEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457          185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD-FINPATCGDKTVSQVIKEMTDGGADYCFECI  262 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~-v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~  262 (371)
                      +++||+|+ |++|...++.+...|+ +|+.+++++++.+.+...+... ..|-.+  ...+.+.+....++++|+++.+.
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~~d~vi~~a   78 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVAD--PASVAGLAWKLDGEALDAAVYVA   78 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCC--HHHHHHHHHHhcCCCCCEEEECC
Confidence            47899997 9999998888877899 8999999888777776665432 223222  12222222223333799999877


Q ss_pred             CC
Q 017457          263 GL  264 (371)
Q Consensus       263 g~  264 (371)
                      |.
T Consensus        79 g~   80 (222)
T PRK06953         79 GV   80 (222)
T ss_pred             Cc
Confidence            64

>PRK09291 short chain dehydrogenase; Provisional

Probab=96.14  E-value=0.04  Score=49.19  Aligned_cols=73  Identities=14%  Similarity=0.104  Sum_probs=50.0

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eE--EcCCCCCCccHHHHHHHhhCCCc
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DF--INPATCGDKTVSQVIKEMTDGGA  255 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v--~~~~~~~~~~~~~~i~~~~~gg~  255 (371)
                      ++++||+|+ |++|...++.+...|+ +|+++.+++++.+.+.+    .+.. .+  .|..     +. +.+.+...+++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~-~~~~~~~~~~i   74 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLT-----DA-IDRAQAAEWDV   74 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCC-----CH-HHHHHHhcCCC
Confidence            468999998 9999999999999999 89999988766554432    2322 12  2322     22 23444334489


Q ss_pred             CEEEECCC
Q 017457          256 DYCFECIG  263 (371)
Q Consensus       256 d~vid~~g  263 (371)
                      |++|++.|
T Consensus        75 d~vi~~ag   82 (257)
T PRK09291         75 DVLLNNAG   82 (257)
T ss_pred             CEEEECCC
Confidence            99999877

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.14  E-value=0.034  Score=49.91  Aligned_cols=80  Identities=14%  Similarity=0.206  Sum_probs=48.5

Q ss_pred             CCCeEEEEcCC---hHHHHHHHHHHHcCCCeEEEEcCChhHHH---HH-HHhCcceEEcCCCCCCccHHHHHHHhhC--C
Q 017457          183 VGSTVAIFGLG---AVGLAVAEGARLNRASKIIGVDINPEKFE---IG-KKFGITDFINPATCGDKTVSQVIKEMTD--G  253 (371)
Q Consensus       183 ~g~~VLI~G~g---~~G~~ai~la~~~g~~~Vi~~~~~~~~~~---~~-~~lga~~v~~~~~~~~~~~~~~i~~~~~--g  253 (371)
                      +|+++||+|++   ++|.+.++.....|+ +|++++++++..+   .+ ++++...++.-+-.+.++..+.+.....  +
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   87 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG   87 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence            57899999873   899999888888999 8988887754322   22 2234322332221111223333333222  3


Q ss_pred             CcCEEEECCC
Q 017457          254 GADYCFECIG  263 (371)
Q Consensus       254 g~d~vid~~g  263 (371)
                      .+|+++++.|
T Consensus        88 ~ld~lv~nAg   97 (258)
T PRK07533         88 RLDFLLHSIA   97 (258)
T ss_pred             CCCEEEEcCc
Confidence            7899998876

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=96.13  E-value=0.052  Score=51.93  Aligned_cols=91  Identities=23%  Similarity=0.244  Sum_probs=59.4

Q ss_pred             EEEEcCChHHHHHHHHHHHcCCC-eEEEEcCChhHHHHHHH--hC--cc-eEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          187 VAIFGLGAVGLAVAEGARLNRAS-KIIGVDINPEKFEIGKK--FG--IT-DFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       187 VLI~G~g~~G~~ai~la~~~g~~-~Vi~~~~~~~~~~~~~~--lg--a~-~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      |+|+|+|.+|..++..+...+-. +|++.+++.++.+.+.+  .+  .. ..+|..     +. +.+.++.. +.|+|++
T Consensus         1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~-----~~-~~l~~~~~-~~dvVin   73 (386)
T PF03435_consen    1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVN-----DP-ESLAELLR-GCDVVIN   73 (386)
T ss_dssp             EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TT-----TH-HHHHHHHT-TSSEEEE
T ss_pred             CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecC-----CH-HHHHHHHh-cCCEEEE
Confidence            78999999999999998876643 89999999999777654  22  22 223332     22 23555544 5699999


Q ss_pred             CCCChHHHHHHHHHhhcCCceEEEE
Q 017457          261 CIGLTSVMNDAFNSSREGWGKTVIL  285 (371)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~~G~~v~~  285 (371)
                      |+|.......+-.|+..+ -.+++.
T Consensus        74 ~~gp~~~~~v~~~~i~~g-~~yvD~   97 (386)
T PF03435_consen   74 CAGPFFGEPVARACIEAG-VHYVDT   97 (386)
T ss_dssp             -SSGGGHHHHHHHHHHHT--EEEES
T ss_pred             CCccchhHHHHHHHHHhC-CCeecc
Confidence            999776455666677776 677774

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK07063 short chain dehydrogenase; Provisional

Probab=96.13  E-value=0.037  Score=49.60  Aligned_cols=81  Identities=16%  Similarity=0.231  Sum_probs=51.2

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-h-----Ccc-eEEcCCCCCCccHHHHHHHhhC--
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F-----GIT-DFINPATCGDKTVSQVIKEMTD--  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l-----ga~-~v~~~~~~~~~~~~~~i~~~~~--  252 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|+.+++++++.+.+.+ +     +.. .++..+-.+.++..+.+.+...  
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF   84 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4789999998 9999999998888999 89999988776554422 2     221 1221111011223333332221  


Q ss_pred             CCcCEEEECCCC
Q 017457          253 GGADYCFECIGL  264 (371)
Q Consensus       253 gg~d~vid~~g~  264 (371)
                      +.+|+++++.|.
T Consensus        85 g~id~li~~ag~   96 (260)
T PRK07063         85 GPLDVLVNNAGI   96 (260)
T ss_pred             CCCcEEEECCCc
Confidence            378999998873

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=96.11  E-value=0.04  Score=48.88  Aligned_cols=80  Identities=20%  Similarity=0.171  Sum_probs=51.4

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eEEcCCCCCCccHHHHHHHhhC--CC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--GG  254 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~~~~~~~~~~~~~~i~~~~~--gg  254 (371)
                      +++++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+.+    .+.. .++..+-.+.....+.+.++..  ++
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   80 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP   80 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4789999998 9999999999888999 89999888776554432    2322 2232222111223333333322  26


Q ss_pred             cCEEEECCC
Q 017457          255 ADYCFECIG  263 (371)
Q Consensus       255 ~d~vid~~g  263 (371)
                      +|++|.+.+
T Consensus        81 ~d~vi~~ag   89 (250)
T TIGR03206        81 VDVLVNNAG   89 (250)
T ss_pred             CCEEEECCC
Confidence            899999887

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK05717 oxidoreductase; Validated

Probab=96.11  E-value=0.04  Score=49.27  Aligned_cols=79  Identities=20%  Similarity=0.235  Sum_probs=50.5

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCcc-eEE--cCCCCCCccHHHHHHHhhC--CCc
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGIT-DFI--NPATCGDKTVSQVIKEMTD--GGA  255 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~-~v~--~~~~~~~~~~~~~i~~~~~--gg~  255 (371)
                      .|+++||+|+ |++|...+..+...|+ +|+.++++.++.+.+ ++++.. ..+  |-.+  ..+..+.+.+...  +.+
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~i   85 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVAD--EAQVAAGVAEVLGQFGRL   85 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCC--HHHHHHHHHHHHHHhCCC
Confidence            4789999997 9999999888888899 899998776655443 334432 122  2222  1222222333322  268


Q ss_pred             CEEEECCCC
Q 017457          256 DYCFECIGL  264 (371)
Q Consensus       256 d~vid~~g~  264 (371)
                      |++|++.|.
T Consensus        86 d~li~~ag~   94 (255)
T PRK05717         86 DALVCNAAI   94 (255)
T ss_pred             CEEEECCCc
Confidence            999988773

>PRK06138 short chain dehydrogenase; Provisional

Probab=96.09  E-value=0.041  Score=48.88  Aligned_cols=81  Identities=17%  Similarity=0.169  Sum_probs=50.6

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-h--Ccc-eEEcCCCCCCccHHHHHHHhhC--CCc
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F--GIT-DFINPATCGDKTVSQVIKEMTD--GGA  255 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l--ga~-~v~~~~~~~~~~~~~~i~~~~~--gg~  255 (371)
                      +++++||+|+ |++|...++.+...|+ +|+.+.++.++.+...+ +  +.. .++..+-.+.....+.+.....  +++
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   82 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL   82 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999998 9999998888878899 89999988776544332 2  321 2222221111222222222221  378


Q ss_pred             CEEEECCCC
Q 017457          256 DYCFECIGL  264 (371)
Q Consensus       256 d~vid~~g~  264 (371)
                      |+++++.+.
T Consensus        83 d~vi~~ag~   91 (252)
T PRK06138         83 DVLVNNAGF   91 (252)
T ss_pred             CEEEECCCC
Confidence            999998884

>CHL00194 ycf39 Ycf39; Provisional

Probab=96.09  E-value=0.082  Score=49.05  Aligned_cols=93  Identities=10%  Similarity=0.131  Sum_probs=61.3

Q ss_pred             eEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEE-cCCCCCCccHHHHHHHhhCCCcCEEEECCC
Q 017457          186 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI-NPATCGDKTVSQVIKEMTDGGADYCFECIG  263 (371)
Q Consensus       186 ~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~-~~~~~~~~~~~~~i~~~~~gg~d~vid~~g  263 (371)
                      +|||+|+ |.+|...+..+...|. +|++++++.++...+...+++.+. |..+   .   +.+.+... ++|+||++++
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d---~---~~l~~al~-g~d~Vi~~~~   73 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLSL---P---ETLPPSFK-GVTAIIDAST   73 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCCC---H---HHHHHHHC-CCCEEEECCC
Confidence            6999998 9999999999888999 899999887665555555654332 2211   1   22333222 6899999865


Q ss_pred             ChH------------HHHHHHHHhhcCCc--eEEEECc
Q 017457          264 LTS------------VMNDAFNSSREGWG--KTVILGV  287 (371)
Q Consensus       264 ~~~------------~~~~~~~~l~~~~G--~~v~~g~  287 (371)
                      ...            ....+++.++.. |  +++.++.
T Consensus        74 ~~~~~~~~~~~~~~~~~~~l~~aa~~~-gvkr~I~~Ss  110 (317)
T CHL00194         74 SRPSDLYNAKQIDWDGKLALIEAAKAA-KIKRFIFFSI  110 (317)
T ss_pred             CCCCCccchhhhhHHHHHHHHHHHHHc-CCCEEEEecc
Confidence            321            123455666554 5  7888775

>PRK00811 spermidine synthase; Provisional

Probab=96.08  E-value=0.046  Score=49.91  Aligned_cols=96  Identities=19%  Similarity=0.209  Sum_probs=63.1

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh-C-----c--c---eEEcCCCCCCccHHHHHHHh
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-G-----I--T---DFINPATCGDKTVSQVIKEM  250 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l-g-----a--~---~v~~~~~~~~~~~~~~i~~~  250 (371)
                      .++++||++|+|. |.++..+++..+..+|++++.+++-.+.+++. .     .  +   .++.      .+..+.+.. 
T Consensus        75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~------~Da~~~l~~-  146 (283)
T PRK00811         75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVI------GDGIKFVAE-  146 (283)
T ss_pred             CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEE------CchHHHHhh-
Confidence            4568999999866 66677777776766999999999887777662 1     1  1   1221      233333433 


Q ss_pred             hCCCcCEEEE-CCCC---------hHHHHHHHHHhhcCCceEEEEC
Q 017457          251 TDGGADYCFE-CIGL---------TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       251 ~~gg~d~vid-~~g~---------~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      ..+.+|+|+. +...         ...++.+.+.|+++ |.++.-.
T Consensus       147 ~~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~~  191 (283)
T PRK00811        147 TENSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQS  191 (283)
T ss_pred             CCCcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEeC
Confidence            3448999984 3211         22357788999998 9988653

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.07  E-value=0.14  Score=48.87  Aligned_cols=95  Identities=18%  Similarity=0.118  Sum_probs=66.5

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHH-HHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEI-GKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~-~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      -.++++||+|+|-+|.+++..+...|..+|+++-++.+|.+. ++++|+..+ ..+     +..+.+.     .+|+||.
T Consensus       176 L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~-~l~-----el~~~l~-----~~DvVis  244 (414)
T COG0373         176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV-ALE-----ELLEALA-----EADVVIS  244 (414)
T ss_pred             cccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee-cHH-----HHHHhhh-----hCCEEEE
Confidence            478899999999999999999999998899999999887664 567885422 211     1112221     6899999


Q ss_pred             CCCChHH---HHHHHHHhhcCCc-eEEEECc
Q 017457          261 CIGLTSV---MNDAFNSSREGWG-KTVILGV  287 (371)
Q Consensus       261 ~~g~~~~---~~~~~~~l~~~~G-~~v~~g~  287 (371)
                      +++.+..   .....+.++.... -+++++.
T Consensus       245 sTsa~~~ii~~~~ve~a~~~r~~~livDiav  275 (414)
T COG0373         245 STSAPHPIITREMVERALKIRKRLLIVDIAV  275 (414)
T ss_pred             ecCCCccccCHHHHHHHHhcccCeEEEEecC
Confidence            9887652   2344455555423 4677765

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=96.07  E-value=0.084  Score=45.90  Aligned_cols=109  Identities=19%  Similarity=0.220  Sum_probs=74.2

Q ss_pred             HHHcCCCCCCeEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHHHHHHh
Q 017457          176 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEM  250 (371)
Q Consensus       176 ~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~  250 (371)
                      ...++....++||=+|.+. |..++++|..+. -.+++.++.++++.+.+++    .|.+..+.-..  ..+..+.+.+.
T Consensus        52 ~~L~~~~~~k~iLEiGT~~-GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~--~gdal~~l~~~  128 (219)
T COG4122          52 RLLARLSGPKRILEIGTAI-GYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLL--GGDALDVLSRL  128 (219)
T ss_pred             HHHHHhcCCceEEEeeccc-CHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEe--cCcHHHHHHhc
Confidence            3445677888999888643 788888998876 3389999999998877765    56544221111  02455566553


Q ss_pred             hCCCcCEEE-ECCC--ChHHHHHHHHHhhcCCceEEEECcc
Q 017457          251 TDGGADYCF-ECIG--LTSVMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       251 ~~gg~d~vi-d~~g--~~~~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      ..+.||+|| |+--  -+..++.+++.|+++ |.++.=...
T Consensus       129 ~~~~fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~DNvl  168 (219)
T COG4122         129 LDGSFDLVFIDADKADYPEYLERALPLLRPG-GLIVADNVL  168 (219)
T ss_pred             cCCCccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEeecc
Confidence            345899998 6544  345689999999997 887765543

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.05  E-value=0.041  Score=49.48  Aligned_cols=78  Identities=17%  Similarity=0.243  Sum_probs=47.4

Q ss_pred             CCCeEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcceE--EcCCCCCCccHHHHHHHhhC-
Q 017457          183 VGSTVAIFGL-G--AVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITDF--INPATCGDKTVSQVIKEMTD-  252 (371)
Q Consensus       183 ~g~~VLI~G~-g--~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~~v--~~~~~~~~~~~~~~i~~~~~-  252 (371)
                      .|+++||+|+ +  ++|.+.++.+...|+ +|+.+++++...+.++    +.|....  .|-.+  .++..+.+.+... 
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~--~~~v~~~~~~~~~~   83 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTN--PKSISNLFDDIKEK   83 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCC--HHHHHHHHHHHHHH
Confidence            5789999998 4  799998888778899 8888887642222222    2343332  23222  1233333333322 


Q ss_pred             -CCcCEEEECCC
Q 017457          253 -GGADYCFECIG  263 (371)
Q Consensus       253 -gg~d~vid~~g  263 (371)
                       +.+|+++++.|
T Consensus        84 ~g~iDilVnnag   95 (260)
T PRK06603         84 WGSFDFLLHGMA   95 (260)
T ss_pred             cCCccEEEEccc
Confidence             37999998776

>PRK07890 short chain dehydrogenase; Provisional

Probab=96.04  E-value=0.045  Score=48.89  Aligned_cols=80  Identities=14%  Similarity=0.128  Sum_probs=51.9

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-h---Ccc-eE--EcCCCCCCccHHHHHHHhhC-
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F---GIT-DF--INPATCGDKTVSQVIKEMTD-  252 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l---ga~-~v--~~~~~~~~~~~~~~i~~~~~-  252 (371)
                      -+++++||+|+ |++|...+..+...|+ +|+++++++++.+.+.+ +   +.. +.  .|..+  .+.+...+.+... 
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   79 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITD--EDQCANLVALALER   79 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCC--HHHHHHHHHHHHHH
Confidence            35789999998 9999999998889999 89999988876554432 2   322 11  22221  1233333333222 


Q ss_pred             -CCcCEEEECCCC
Q 017457          253 -GGADYCFECIGL  264 (371)
Q Consensus       253 -gg~d~vid~~g~  264 (371)
                       +.+|+++++.|.
T Consensus        80 ~g~~d~vi~~ag~   92 (258)
T PRK07890         80 FGRVDALVNNAFR   92 (258)
T ss_pred             cCCccEEEECCcc
Confidence             368999988763

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=96.04  E-value=0.048  Score=48.81  Aligned_cols=81  Identities=21%  Similarity=0.325  Sum_probs=51.7

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eEEcCCCCCCccHHHHHHHhhC--CC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--GG  254 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~~~~~~~~~~~~~~i~~~~~--gg  254 (371)
                      +++++||+|+ |++|...++.+...|+ +|++++++.++.+.+.+    .+.. ..+..+-.+...+.+.+.++..  +.
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~   89 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH   89 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5789999998 9999999998888999 89999998877655432    2322 1222111111223222232222  36


Q ss_pred             cCEEEECCCC
Q 017457          255 ADYCFECIGL  264 (371)
Q Consensus       255 ~d~vid~~g~  264 (371)
                      +|.++.+.|.
T Consensus        90 id~vi~~ag~   99 (259)
T PRK08213         90 VDILVNNAGA   99 (259)
T ss_pred             CCEEEECCCC
Confidence            8999998774

>PRK07035 short chain dehydrogenase; Provisional

Probab=96.03  E-value=0.046  Score=48.70  Aligned_cols=78  Identities=13%  Similarity=0.160  Sum_probs=50.5

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eEE--cCCCCCCccHHHHHHHhhC--
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFI--NPATCGDKTVSQVIKEMTD--  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~--~~~~~~~~~~~~~i~~~~~--  252 (371)
                      +++++||+|+ |++|.+.++.+...|+ +|+.++++.++.+.+.+    .+.. +.+  |..+  ..+..+.+.+...  
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   83 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGE--MEQIDALFAHIRERH   83 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence            4678999998 9999999999988999 89999988776554432    2321 222  2222  1222222333222  


Q ss_pred             CCcCEEEECCC
Q 017457          253 GGADYCFECIG  263 (371)
Q Consensus       253 gg~d~vid~~g  263 (371)
                      +.+|+++++.+
T Consensus        84 ~~id~li~~ag   94 (252)
T PRK07035         84 GRLDILVNNAA   94 (252)
T ss_pred             CCCCEEEECCC
Confidence            26899998887

>PRK09072 short chain dehydrogenase; Provisional

Probab=96.01  E-value=0.055  Score=48.61  Aligned_cols=81  Identities=21%  Similarity=0.272  Sum_probs=50.6

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-h--Cc-ceEEcCCCCCCccHHHHHHHhh-CCCcC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F--GI-TDFINPATCGDKTVSQVIKEMT-DGGAD  256 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l--ga-~~v~~~~~~~~~~~~~~i~~~~-~gg~d  256 (371)
                      +++++||+|+ |++|...+..+...|+ +|+++++++++.+.+.. +  +. .+.+..+-.+.....+...... .+.+|
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id   82 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGIN   82 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence            4678999997 9999999988888999 89999998877665533 2  21 1222211101112222222111 24789


Q ss_pred             EEEECCCC
Q 017457          257 YCFECIGL  264 (371)
Q Consensus       257 ~vid~~g~  264 (371)
                      +++++.|.
T Consensus        83 ~lv~~ag~   90 (263)
T PRK09072         83 VLINNAGV   90 (263)
T ss_pred             EEEECCCC
Confidence            99998774

>PRK00536 speE spermidine synthase; Provisional

Probab=96.01  E-value=0.03  Score=50.23  Aligned_cols=98  Identities=9%  Similarity=-0.069  Sum_probs=64.9

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCc-ceEEcCCCCCCccHHHHHHHhhCCCcCEEE
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGI-TDFINPATCGDKTVSQVIKEMTDGGADYCF  259 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga-~~v~~~~~~~~~~~~~~i~~~~~gg~d~vi  259 (371)
                      ...++|||+|+|- |-++=.++|.- . +|..++.+++=.+.+++ +.. ...++.-+   -.+...+.+...+.+|++|
T Consensus        71 ~~pk~VLIiGGGD-Gg~~REvLkh~-~-~v~mVeID~~Vv~~~k~~lP~~~~~~~DpR---v~l~~~~~~~~~~~fDVII  144 (262)
T PRK00536         71 KELKEVLIVDGFD-LELAHQLFKYD-T-HVDFVQADEKILDSFISFFPHFHEVKNNKN---FTHAKQLLDLDIKKYDLII  144 (262)
T ss_pred             CCCCeEEEEcCCc-hHHHHHHHCcC-C-eeEEEECCHHHHHHHHHHCHHHHHhhcCCC---EEEeehhhhccCCcCCEEE
Confidence            4568999998765 55666888875 3 89999998887777777 321 01122111   1122223333334799987


Q ss_pred             -ECCCChHHHHHHHHHhhcCCceEEEEC
Q 017457          260 -ECIGLTSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       260 -d~~g~~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                       |++-+..-++.+.++|+++ |.++.=+
T Consensus       145 vDs~~~~~fy~~~~~~L~~~-Gi~v~Qs  171 (262)
T PRK00536        145 CLQEPDIHKIDGLKRMLKED-GVFISVA  171 (262)
T ss_pred             EcCCCChHHHHHHHHhcCCC-cEEEECC
Confidence             8777777678999999998 9887643

>PRK07774 short chain dehydrogenase; Provisional

Probab=96.00  E-value=0.05  Score=48.30  Aligned_cols=79  Identities=24%  Similarity=0.287  Sum_probs=49.8

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-h---Ccc-eE--EcCCCCCCccHHHHHHHhh--C
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F---GIT-DF--INPATCGDKTVSQVIKEMT--D  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l---ga~-~v--~~~~~~~~~~~~~~i~~~~--~  252 (371)
                      .++++||+|+ |++|...+..+...|+ +|+++++++++.+.+.+ +   +.. ..  .|-.+  .+...+.+.+..  .
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~   81 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSD--PDSAKAMADATVSAF   81 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHh
Confidence            5688999998 9999999988888899 89999988765544322 1   211 12  22222  122222222221  1


Q ss_pred             CCcCEEEECCCC
Q 017457          253 GGADYCFECIGL  264 (371)
Q Consensus       253 gg~d~vid~~g~  264 (371)
                      +++|++|++.|.
T Consensus        82 ~~id~vi~~ag~   93 (250)
T PRK07774         82 GGIDYLVNNAAI   93 (250)
T ss_pred             CCCCEEEECCCC
Confidence            268999998873

>PRK07402 precorrin-6B methylase; Provisional

Probab=96.00  E-value=0.17  Score=43.37  Aligned_cols=103  Identities=17%  Similarity=0.303  Sum_probs=62.7

Q ss_pred             HHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcce--EEcCCCCCCccHHHHHHH
Q 017457          176 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITD--FINPATCGDKTVSQVIKE  249 (371)
Q Consensus       176 ~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~--v~~~~~~~~~~~~~~i~~  249 (371)
                      .....+.++++||=+|+|. |..++.+++.....+|++++.+++..+.+++    ++...  ++..      +..+.+..
T Consensus        33 ~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~------d~~~~~~~  105 (196)
T PRK07402         33 ISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEG------SAPECLAQ  105 (196)
T ss_pred             HHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEEC------chHHHHhh
Confidence            3445677889988888754 5556666665432399999999988777654    45432  2221      22222222


Q ss_pred             hhCCCcCEE-EECCCC-hHHHHHHHHHhhcCCceEEEECc
Q 017457          250 MTDGGADYC-FECIGL-TSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       250 ~~~gg~d~v-id~~g~-~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      +.. .+|.+ ++.... ...++.+.+.|+++ |+++....
T Consensus       106 ~~~-~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~  143 (196)
T PRK07402        106 LAP-APDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATAS  143 (196)
T ss_pred             CCC-CCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEee
Confidence            222 34444 454322 34578899999998 99887753

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=96.00  E-value=0.048  Score=49.42  Aligned_cols=80  Identities=24%  Similarity=0.238  Sum_probs=50.7

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eEEcCCCCCCccHHHHHHHhhC--CC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--GG  254 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~~~~~~~~~~~~~~i~~~~~--gg  254 (371)
                      +++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+.+    .+.. ..+..+-.+..+....+.+...  +.
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   87 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGP   87 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999998 9999999998888999 89999988765544322    2322 1222111011223333333222  37


Q ss_pred             cCEEEECCC
Q 017457          255 ADYCFECIG  263 (371)
Q Consensus       255 ~d~vid~~g  263 (371)
                      +|+++++.|
T Consensus        88 id~li~~ag   96 (278)
T PRK08277         88 CDILINGAG   96 (278)
T ss_pred             CCEEEECCC
Confidence            899999877

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=95.99  E-value=0.068  Score=48.97  Aligned_cols=37  Identities=22%  Similarity=0.344  Sum_probs=32.1

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      .++++++|+|+|++|.+++..+...|+++|+++.++.
T Consensus       124 ~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~  160 (289)
T PRK12548        124 VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD  160 (289)
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence            3578999999999999988888889996799999885

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=95.97  E-value=0.028  Score=49.08  Aligned_cols=101  Identities=18%  Similarity=0.202  Sum_probs=65.0

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHH----hCcce--EEcCCCCCCccHHHHH
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGITD--FINPATCGDKTVSQVI  247 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~----lga~~--v~~~~~~~~~~~~~~i  247 (371)
                      +.....++++++||-+|+|. |..++.+++..+. .+|++++.+++..+.+++    .|.+.  ++..+      ..+..
T Consensus        69 ~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d------~~~~~  141 (215)
T TIGR00080        69 MTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGD------GTQGW  141 (215)
T ss_pred             HHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECC------cccCC
Confidence            34456789999999999866 6677778877653 269999999887666543    45432  22211      11100


Q ss_pred             HHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEE
Q 017457          248 KEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL  285 (371)
Q Consensus       248 ~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~  285 (371)
                        ...+.||+|+-..........+.+.|+++ |+++..
T Consensus       142 --~~~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~  176 (215)
T TIGR00080       142 --EPLAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMP  176 (215)
T ss_pred             --cccCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEE
Confidence              01127999885444444467888999998 998764

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PRK05854 short chain dehydrogenase; Provisional

Probab=95.97  E-value=0.048  Score=50.57  Aligned_cols=41  Identities=24%  Similarity=0.231  Sum_probs=34.8

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG  224 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~  224 (371)
                      .+++++|+|+ +++|.+.+..+...|+ +|++++++.++.+.+
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~   54 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAA   54 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH
Confidence            4789999998 9999999888888999 999999988765543

>PRK06194 hypothetical protein; Provisional

Probab=95.97  E-value=0.047  Score=49.71  Aligned_cols=81  Identities=17%  Similarity=0.239  Sum_probs=50.3

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-Hh---Ccc-eEEcCCCCCCccHHHHHHHhh--CCC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF---GIT-DFINPATCGDKTVSQVIKEMT--DGG  254 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~l---ga~-~v~~~~~~~~~~~~~~i~~~~--~gg  254 (371)
                      +++++||+|+ |++|...+..+...|+ +|++++++.++.+... ++   +.. .++..+-.+.+++.+.+....  .++
T Consensus         5 ~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~   83 (287)
T PRK06194          5 AGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGA   83 (287)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            3678999998 9999999988888999 8999998876654432 22   332 122222101122222222221  136


Q ss_pred             cCEEEECCCC
Q 017457          255 ADYCFECIGL  264 (371)
Q Consensus       255 ~d~vid~~g~  264 (371)
                      +|+++++.|.
T Consensus        84 id~vi~~Ag~   93 (287)
T PRK06194         84 VHLLFNNAGV   93 (287)
T ss_pred             CCEEEECCCC
Confidence            8999998874

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=95.96  E-value=0.072  Score=49.26  Aligned_cols=92  Identities=21%  Similarity=0.382  Sum_probs=61.9

Q ss_pred             CCeEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457          184 GSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  262 (371)
Q Consensus       184 g~~VLI~G~g~~G~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~  262 (371)
                      ..+|.|+|.|.+|.+.+..++..|. .+|++.++++++.+.+++.|......      .+..+.+     ..+|+||.|+
T Consensus         6 ~~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~------~~~~~~~-----~~aDvViiav   74 (307)
T PRK07502          6 FDRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT------TSAAEAV-----KGADLVILCV   74 (307)
T ss_pred             CcEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec------CCHHHHh-----cCCCEEEECC
Confidence            3679999999999998888887774 37999999999888888877531111      1221111     2689999999


Q ss_pred             CChHH---HHHHHHHhhcCCceEEEECc
Q 017457          263 GLTSV---MNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       263 g~~~~---~~~~~~~l~~~~G~~v~~g~  287 (371)
                      +....   +..+...++++ ..++++|.
T Consensus        75 p~~~~~~v~~~l~~~l~~~-~iv~dvgs  101 (307)
T PRK07502         75 PVGASGAVAAEIAPHLKPG-AIVTDVGS  101 (307)
T ss_pred             CHHHHHHHHHHHHhhCCCC-CEEEeCcc
Confidence            87542   23333445565 66666654

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=95.96  E-value=0.033  Score=47.90  Aligned_cols=99  Identities=15%  Similarity=0.235  Sum_probs=61.7

Q ss_pred             HHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh----CcceEEcCCCCCCccHHHHHHHhhC
Q 017457          177 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GITDFINPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       177 ~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l----ga~~v~~~~~~~~~~~~~~i~~~~~  252 (371)
                      ......++.+||-+|+|. |..+..+|+. |. +|++++.+++..+.+++.    +...+ +...   .++.+ . .+ .
T Consensus        24 ~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~---~d~~~-~-~~-~   93 (197)
T PRK11207         24 EAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNL-HTAV---VDLNN-L-TF-D   93 (197)
T ss_pred             HhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEe---cChhh-C-Cc-C
Confidence            334456778999999876 7777788874 77 999999999877766542    22211 1111   12111 0 11 2


Q ss_pred             CCcCEEEECCC----C----hHHHHHHHHHhhcCCceEEEEC
Q 017457          253 GGADYCFECIG----L----TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       253 gg~d~vid~~g----~----~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      +.+|+|+....    .    ...+..+.+.|+++ |.++.+.
T Consensus        94 ~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~~  134 (197)
T PRK11207         94 GEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIVA  134 (197)
T ss_pred             CCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence            37999986533    1    23467888889998 9865543

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=95.93  E-value=0.05  Score=48.77  Aligned_cols=78  Identities=21%  Similarity=0.258  Sum_probs=49.1

Q ss_pred             eEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHHHHHHhhC--CCcCEE
Q 017457          186 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTD--GGADYC  258 (371)
Q Consensus       186 ~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~~~--gg~d~v  258 (371)
                      ++||+|+ +++|.+.++.....|+ +|+.+++++++.+.+.+    .+..+.+..+-.+.++..+.+.+...  +++|++
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l   80 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL   80 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            6899998 9999998888888899 89999988876554322    23222222221111223333333222  378999


Q ss_pred             EECCCC
Q 017457          259 FECIGL  264 (371)
Q Consensus       259 id~~g~  264 (371)
                      +++.|.
T Consensus        81 i~naG~   86 (259)
T PRK08340         81 VWNAGN   86 (259)
T ss_pred             EECCCC
Confidence            998773

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.93  E-value=0.052  Score=49.30  Aligned_cols=102  Identities=12%  Similarity=0.214  Sum_probs=64.1

Q ss_pred             CCCeEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChh---HHHHH-HHhCcceEE--cCCCCCCccHHHHHHHhhC-
Q 017457          183 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINPE---KFEIG-KKFGITDFI--NPATCGDKTVSQVIKEMTD-  252 (371)
Q Consensus       183 ~g~~VLI~G~---g~~G~~ai~la~~~g~~~Vi~~~~~~~---~~~~~-~~lga~~v~--~~~~~~~~~~~~~i~~~~~-  252 (371)
                      .++++||+|+   +++|.+.++.+...|+ +|+.++++++   +.+.+ ++++....+  |-.+  .+...+.+.+... 
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~i~~~   80 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSK--PEHFKSLAESLKKD   80 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCC--HHHHHHHHHHHHHH
Confidence            4789999986   4899999888888999 8998888753   33322 334433222  3222  1223333333322 


Q ss_pred             -CCcCEEEECCCCh--------------H---------------HHHHHHHHhhcCCceEEEECcc
Q 017457          253 -GGADYCFECIGLT--------------S---------------VMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       253 -gg~d~vid~~g~~--------------~---------------~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                       +.+|+++++.|..              .               ..+.+++.+..+ |+++.++..
T Consensus        81 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-g~Iv~isS~  145 (274)
T PRK08415         81 LGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG-ASVLTLSYL  145 (274)
T ss_pred             cCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC-CcEEEEecC
Confidence             3789999988731              0               235566677776 899888753

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.92  E-value=0.053  Score=48.77  Aligned_cols=81  Identities=19%  Similarity=0.258  Sum_probs=48.1

Q ss_pred             CCCeEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHHHHHHhhC--C
Q 017457          183 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTD--G  253 (371)
Q Consensus       183 ~g~~VLI~G~---g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~~~--g  253 (371)
                      +++++||+|+   +++|.+.++.+...|+ +|+.+.+.+...+.+++    .|....+..+-.+.++..+.+.+...  +
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   83 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD   83 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence            5789999984   5899998888888999 88887665433333332    23222222111112233333333322  3


Q ss_pred             CcCEEEECCCC
Q 017457          254 GADYCFECIGL  264 (371)
Q Consensus       254 g~d~vid~~g~  264 (371)
                      ++|+++++.|.
T Consensus        84 ~iD~lVnnAG~   94 (261)
T PRK08690         84 GLDGLVHSIGF   94 (261)
T ss_pred             CCcEEEECCcc
Confidence            79999998763

>PRK06197 short chain dehydrogenase; Provisional

Probab=95.91  E-value=0.054  Score=49.94  Aligned_cols=80  Identities=14%  Similarity=0.152  Sum_probs=49.6

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHh-----Ccc-eEEcCCCCCCccHHHHHHHhhC--
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKF-----GIT-DFINPATCGDKTVSQVIKEMTD--  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~l-----ga~-~v~~~~~~~~~~~~~~i~~~~~--  252 (371)
                      .+++|||+|+ |++|...+..+...|+ +|+++.++.++.+.+ +++     +.. .++..+-.+.++..+.+.++..  
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~   93 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY   93 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence            5789999998 9999999888888899 899999887765432 111     111 1222111011222222333322  


Q ss_pred             CCcCEEEECCC
Q 017457          253 GGADYCFECIG  263 (371)
Q Consensus       253 gg~d~vid~~g  263 (371)
                      +++|++|++.|
T Consensus        94 ~~iD~li~nAg  104 (306)
T PRK06197         94 PRIDLLINNAG  104 (306)
T ss_pred             CCCCEEEECCc
Confidence            26899999887

>PRK08267 short chain dehydrogenase; Provisional

Probab=95.91  E-value=0.064  Score=48.05  Aligned_cols=77  Identities=17%  Similarity=0.186  Sum_probs=51.3

Q ss_pred             CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hC-cc-e--EEcCCCCCCccHHHHHHHhh---CCCc
Q 017457          185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FG-IT-D--FINPATCGDKTVSQVIKEMT---DGGA  255 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lg-a~-~--v~~~~~~~~~~~~~~i~~~~---~gg~  255 (371)
                      +++||+|+ |++|...+..+...|+ +|++++++.++.+.+.+ ++ .. .  ..|-.+  ..+..+.+....   .+.+
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~~~~i   78 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTD--RAAWDAALADFAAATGGRL   78 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCCC
Confidence            57999998 9999999998888999 89999998887766543 22 11 1  223322  122333333221   3478


Q ss_pred             CEEEECCCC
Q 017457          256 DYCFECIGL  264 (371)
Q Consensus       256 d~vid~~g~  264 (371)
                      |+++++.|.
T Consensus        79 d~vi~~ag~   87 (260)
T PRK08267         79 DVLFNNAGI   87 (260)
T ss_pred             CEEEECCCC
Confidence            999998874

>PRK09242 tropinone reductase; Provisional

Probab=95.91  E-value=0.058  Score=48.23  Aligned_cols=79  Identities=16%  Similarity=0.163  Sum_probs=51.7

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-h-----Ccc-eEE--cCCCCCCccHHHHHHHhh-
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F-----GIT-DFI--NPATCGDKTVSQVIKEMT-  251 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l-----ga~-~v~--~~~~~~~~~~~~~i~~~~-  251 (371)
                      .++++||+|+ |++|...+..+...|+ +|++++++.++.+.+.+ +     +.+ ..+  |-.+  ..+..+.+.+.. 
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~   84 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSD--DEDRRAILDWVED   84 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCC--HHHHHHHHHHHHH
Confidence            4789999998 9999999999988999 89999988877654432 1     222 122  2222  122222222222 


Q ss_pred             -CCCcCEEEECCCC
Q 017457          252 -DGGADYCFECIGL  264 (371)
Q Consensus       252 -~gg~d~vid~~g~  264 (371)
                       -+++|+++++.|.
T Consensus        85 ~~g~id~li~~ag~   98 (257)
T PRK09242         85 HWDGLHILVNNAGG   98 (257)
T ss_pred             HcCCCCEEEECCCC
Confidence             1378999999874

>PRK08703 short chain dehydrogenase; Provisional

Probab=95.90  E-value=0.036  Score=48.96  Aligned_cols=81  Identities=23%  Similarity=0.256  Sum_probs=51.1

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCc-c---eEEcCCCCCCcc---HHHHHHHh
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI-T---DFINPATCGDKT---VSQVIKEM  250 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga-~---~v~~~~~~~~~~---~~~~i~~~  250 (371)
                      ++++++|+|+ |++|...++.+...|+ +|+++++++++.+.+.+    .+. +   .-.|..+.+..+   +.+.+.+.
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~   83 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA   83 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence            4689999998 9999999988888999 89999998876654422    121 1   112211100012   22233333


Q ss_pred             hCCCcCEEEECCCC
Q 017457          251 TDGGADYCFECIGL  264 (371)
Q Consensus       251 ~~gg~d~vid~~g~  264 (371)
                      ..+.+|+++++.|.
T Consensus        84 ~~~~id~vi~~ag~   97 (239)
T PRK08703         84 TQGKLDGIVHCAGY   97 (239)
T ss_pred             hCCCCCEEEEeccc
Confidence            32478999988873

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.90  E-value=0.018  Score=56.32  Aligned_cols=92  Identities=14%  Similarity=0.114  Sum_probs=62.5

Q ss_pred             HcCCCCCCeEE----EEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcc-eEEcCCCCCCccHHHHHHHhh
Q 017457          178 VAGVEVGSTVA----IFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-DFINPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       178 ~~~~~~g~~VL----I~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~-~v~~~~~~~~~~~~~~i~~~~  251 (371)
                      ..++++|+.+|    |+|+ |++|.+++|+++..|+ .|+.+...+.+....+..+.+ .++|...   ..+.+.+..+.
T Consensus        28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~l~~~~  103 (450)
T PRK08261         28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDATG---ITDPADLKALY  103 (450)
T ss_pred             ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECCC---CCCHHHHHHHH
Confidence            45678888888    8876 9999999999999999 899887666544333333443 4555544   33444443322


Q ss_pred             CCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECcc
Q 017457          252 DGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       252 ~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                                    ..++..++.|.++ |+++.++..
T Consensus       104 --------------~~~~~~l~~l~~~-griv~i~s~  125 (450)
T PRK08261        104 --------------EFFHPVLRSLAPC-GRVVVLGRP  125 (450)
T ss_pred             --------------HHHHHHHHhccCC-CEEEEEccc
Confidence                          2256677788887 888888763

>PRK08643 acetoin reductase; Validated

Probab=95.89  E-value=0.055  Score=48.29  Aligned_cols=78  Identities=18%  Similarity=0.259  Sum_probs=49.9

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcce-EE--cCCCCCCccHHHHHHHhhC--C
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITD-FI--NPATCGDKTVSQVIKEMTD--G  253 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~-v~--~~~~~~~~~~~~~i~~~~~--g  253 (371)
                      ++++||+|+ |++|...++.+...|+ +|++++++.++.+.+..    .+... .+  |-.+  .+...+.+.+...  +
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~   78 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSD--RDQVFAAVRQVVDTFG   78 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence            578999998 9999999998888999 89999988776554432    23221 22  2222  1222222332221  3


Q ss_pred             CcCEEEECCCC
Q 017457          254 GADYCFECIGL  264 (371)
Q Consensus       254 g~d~vid~~g~  264 (371)
                      ++|+++++.|.
T Consensus        79 ~id~vi~~ag~   89 (256)
T PRK08643         79 DLNVVVNNAGV   89 (256)
T ss_pred             CCCEEEECCCC
Confidence            78999998864

>PRK06172 short chain dehydrogenase; Provisional

Probab=95.89  E-value=0.055  Score=48.20  Aligned_cols=81  Identities=22%  Similarity=0.283  Sum_probs=50.3

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HHhCcc-eEEcCCCCCCccHHHHHHHhh--CCC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMT--DGG  254 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~-~v~~~~~~~~~~~~~~i~~~~--~gg  254 (371)
                      +++++||+|+ |++|...+..+...|+ +|+.+++++++.+.+    ++.+.. ..+..+-.+..+..+.+....  -+.
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   84 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR   84 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            4789999998 9999999888888899 899999987765433    223322 222111101122222222221  137


Q ss_pred             cCEEEECCCC
Q 017457          255 ADYCFECIGL  264 (371)
Q Consensus       255 ~d~vid~~g~  264 (371)
                      +|+++++.|.
T Consensus        85 id~li~~ag~   94 (253)
T PRK06172         85 LDYAFNNAGI   94 (253)
T ss_pred             CCEEEECCCC
Confidence            8999998773

>PRK06181 short chain dehydrogenase; Provisional

Probab=95.89  E-value=0.056  Score=48.45  Aligned_cols=80  Identities=19%  Similarity=0.247  Sum_probs=50.1

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcc-eEEcCCCCCCccHHHHHHHhhC--CCc
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GGA  255 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~-~v~~~~~~~~~~~~~~i~~~~~--gg~  255 (371)
                      ++++||+|+ |++|...++.+...|+ +|+++++++++.+.+.    ..+.. .++..+-.+...+.+.+.+...  +++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   79 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGI   79 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            367999998 9999999999889999 9999999876654432    23332 1221111011223333333322  268


Q ss_pred             CEEEECCCC
Q 017457          256 DYCFECIGL  264 (371)
Q Consensus       256 d~vid~~g~  264 (371)
                      |+++++.+.
T Consensus        80 d~vi~~ag~   88 (263)
T PRK06181         80 DILVNNAGI   88 (263)
T ss_pred             CEEEECCCc
Confidence            999998763

>PRK07985 oxidoreductase; Provisional

Probab=95.89  E-value=0.14  Score=47.05  Aligned_cols=103  Identities=16%  Similarity=0.126  Sum_probs=61.4

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh--hHHHHHH----HhCcc-eEE--cCCCCCCccHHHHHHHhh
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP--EKFEIGK----KFGIT-DFI--NPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~--~~~~~~~----~lga~-~v~--~~~~~~~~~~~~~i~~~~  251 (371)
                      -+++++||+|+ |++|.+.++.+...|+ +|+++.++.  ++.+.+.    +.+.. .++  |-.+  .+...+.+.+..
T Consensus        47 ~~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~  123 (294)
T PRK07985         47 LKDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSD--EKFARSLVHEAH  123 (294)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCC--HHHHHHHHHHHH
Confidence            35789999998 9999999998888999 888876432  2333332    23322 122  2222  122333333332


Q ss_pred             C--CCcCEEEECCCCh--------------------------HHHHHHHHHhhcCCceEEEECcc
Q 017457          252 D--GGADYCFECIGLT--------------------------SVMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       252 ~--gg~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      .  +++|+++++.|..                          ..++.+++.+..+ |+++.++..
T Consensus       124 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~iv~iSS~  187 (294)
T PRK07985        124 KALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG-ASIITTSSI  187 (294)
T ss_pred             HHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC-CEEEEECCc
Confidence            2  3789999887631                          0234455556666 899888753

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=95.87  E-value=0.067  Score=47.70  Aligned_cols=81  Identities=26%  Similarity=0.339  Sum_probs=51.0

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-H---hCcc-eEEcCCCCCCccHHHHHHHhhC--CC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-K---FGIT-DFINPATCGDKTVSQVIKEMTD--GG  254 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~---lga~-~v~~~~~~~~~~~~~~i~~~~~--gg  254 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|+.+++++++.+.+. +   .+.. ..+..+-.+.....+.+.....  +.
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   86 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP   86 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence            5789999998 9999999988888999 9999998877654432 2   2322 1222211111222222222221  36


Q ss_pred             cCEEEECCCC
Q 017457          255 ADYCFECIGL  264 (371)
Q Consensus       255 ~d~vid~~g~  264 (371)
                      +|+++++.|.
T Consensus        87 id~vi~~ag~   96 (254)
T PRK08085         87 IDVLINNAGI   96 (254)
T ss_pred             CCEEEECCCc
Confidence            8999998874

>PLN02781 Probable caffeoyl-CoA O-methyltransferase

Probab=95.86  E-value=0.083  Score=46.77  Aligned_cols=107  Identities=15%  Similarity=0.214  Sum_probs=68.0

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHHHHHH
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKE  249 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~  249 (371)
                      +....+..++++||=+|.|. |..++.++++++ ..+|+.++.+++..+.+++    .|...-+....   .+..+.+.+
T Consensus        60 L~~l~~~~~~~~vLEiGt~~-G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~---gda~~~L~~  135 (234)
T PLN02781         60 LSMLVKIMNAKNTLEIGVFT-GYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQ---SDALSALDQ  135 (234)
T ss_pred             HHHHHHHhCCCEEEEecCcc-cHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---ccHHHHHHH
Confidence            34456677889999998743 666667777653 3499999999988777654    45432122122   344444544


Q ss_pred             hh----CCCcCEEE-ECCCC--hHHHHHHHHHhhcCCceEEEEC
Q 017457          250 MT----DGGADYCF-ECIGL--TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       250 ~~----~gg~d~vi-d~~g~--~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      +.    .+.||+|| |+--.  ...+..+++.++++ |.++.-.
T Consensus       136 l~~~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~G-G~ii~dn  178 (234)
T PLN02781        136 LLNNDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVG-GIIAFDN  178 (234)
T ss_pred             HHhCCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-eEEEEEc
Confidence            42    23799998 44221  33477889999997 8876543

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.84  E-value=0.063  Score=48.66  Aligned_cols=82  Identities=16%  Similarity=0.246  Sum_probs=49.1

Q ss_pred             CCCCCeEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChh---HHHHH-HHhCcceEEcCCCCCCccHHHHHHHhhC-
Q 017457          181 VEVGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINPE---KFEIG-KKFGITDFINPATCGDKTVSQVIKEMTD-  252 (371)
Q Consensus       181 ~~~g~~VLI~G~---g~~G~~ai~la~~~g~~~Vi~~~~~~~---~~~~~-~~lga~~v~~~~~~~~~~~~~~i~~~~~-  252 (371)
                      +-.++++||+|+   +++|.+.+..+...|+ +|+.+.+++.   +.+.+ ++++....+..+-.+.++..+.+.+... 
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   85 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK   85 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh
Confidence            345789999986   5899998888888999 8888876642   33332 2345322222211111223333333322 


Q ss_pred             -CCcCEEEECCC
Q 017457          253 -GGADYCFECIG  263 (371)
Q Consensus       253 -gg~d~vid~~g  263 (371)
                       +.+|+++++.|
T Consensus        86 ~g~iD~lv~nAG   97 (272)
T PRK08159         86 WGKLDFVVHAIG   97 (272)
T ss_pred             cCCCcEEEECCc
Confidence             37899998876

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=95.83  E-value=0.055  Score=48.79  Aligned_cols=102  Identities=16%  Similarity=0.284  Sum_probs=71.6

Q ss_pred             HHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc---eEEcCCCCCCccHHHH
Q 017457          174 AAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQV  246 (371)
Q Consensus       174 ~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~---~v~~~~~~~~~~~~~~  246 (371)
                      .+.+..++++|++||=+|+|- |.+++.+|+..|+ +|++++-|++..+.+++    .|..   .+.-      .+    
T Consensus        63 ~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l------~d----  130 (283)
T COG2230          63 LILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRL------QD----  130 (283)
T ss_pred             HHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEe------cc----
Confidence            356778999999999999977 7788888999999 99999999987776654    5543   1110      11    


Q ss_pred             HHHhhCCCcCEEEE-----CCCC---hHHHHHHHHHhhcCCceEEEECccC
Q 017457          247 IKEMTDGGADYCFE-----CIGL---TSVMNDAFNSSREGWGKTVILGVEM  289 (371)
Q Consensus       247 i~~~~~gg~d~vid-----~~g~---~~~~~~~~~~l~~~~G~~v~~g~~~  289 (371)
                      .+++.+ .||-|+.     .+|.   +..+..+-+.|+++ |++.+.....
T Consensus       131 ~rd~~e-~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~~  179 (283)
T COG2230         131 YRDFEE-PFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSITG  179 (283)
T ss_pred             cccccc-ccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEecC
Confidence            111222 4776653     3443   23478888999997 9988877643

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial

Probab=95.83  E-value=0.032  Score=54.88  Aligned_cols=78  Identities=24%  Similarity=0.376  Sum_probs=55.3

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh---------------------hHHHHHHHhCcceEEcCCCCCCc
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP---------------------EKFEIGKKFGITDFINPATCGDK  241 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~---------------------~~~~~~~~lga~~v~~~~~~~~~  241 (371)
                      .+++|+|+|+|+.|+.++..++..|+ .|++.+..+                     ...++++++|++..++..-.  .
T Consensus       140 ~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~--~  216 (467)
T TIGR01318       140 TGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVG--R  216 (467)
T ss_pred             CCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeC--C
Confidence            57899999999999999999999999 788887653                     24567788898765553220  1


Q ss_pred             cHHHHHHHhhCCCcCEEEECCCChH
Q 017457          242 TVSQVIKEMTDGGADYCFECIGLTS  266 (371)
Q Consensus       242 ~~~~~i~~~~~gg~d~vid~~g~~~  266 (371)
                      +.  .+..+.. ++|.||.++|...
T Consensus       217 ~~--~~~~~~~-~~D~vilAtGa~~  238 (467)
T TIGR01318       217 DI--SLDDLLE-DYDAVFLGVGTYR  238 (467)
T ss_pred             cc--CHHHHHh-cCCEEEEEeCCCC
Confidence            11  1122222 6999999998743

This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.

>PLN02253 xanthoxin dehydrogenase

Probab=95.83  E-value=0.052  Score=49.23  Aligned_cols=79  Identities=20%  Similarity=0.246  Sum_probs=49.6

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCc--c-eE--EcCCCCCCccHHHHHHHhhC--C
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGI--T-DF--INPATCGDKTVSQVIKEMTD--G  253 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga--~-~v--~~~~~~~~~~~~~~i~~~~~--g  253 (371)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ .+++.  . ..  .|-.+  .+...+.+.....  +
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~~g   93 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTV--EDDVSRAVDFTVDKFG   93 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCC--HHHHHHHHHHHHHHhC
Confidence            4789999998 9999998888888899 899998877654443 22321  1 12  22222  1222222232222  3


Q ss_pred             CcCEEEECCCC
Q 017457          254 GADYCFECIGL  264 (371)
Q Consensus       254 g~d~vid~~g~  264 (371)
                      ++|+++++.|.
T Consensus        94 ~id~li~~Ag~  104 (280)
T PLN02253         94 TLDIMVNNAGL  104 (280)
T ss_pred             CCCEEEECCCc
Confidence            78999998763

>PLN02476 O-methyltransferase

Probab=95.82  E-value=0.088  Score=47.64  Aligned_cols=107  Identities=14%  Similarity=0.193  Sum_probs=69.7

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHHHHHH
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKE  249 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~  249 (371)
                      +....+..+.++||=+|.+. |..++.+|+.++- .+|+.++.+++..+.+++    .|..+-+....   .+..+.+.+
T Consensus       110 L~~L~~~~~ak~VLEIGT~t-GySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~---GdA~e~L~~  185 (278)
T PLN02476        110 LAMLVQILGAERCIEVGVYT-GYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKH---GLAAESLKS  185 (278)
T ss_pred             HHHHHHhcCCCeEEEecCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHHHHHH
Confidence            34456678889999998743 6677778887642 279999999988777644    56542222222   344455554


Q ss_pred             hh----CCCcCEEE-ECCCC--hHHHHHHHHHhhcCCceEEEEC
Q 017457          250 MT----DGGADYCF-ECIGL--TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       250 ~~----~gg~d~vi-d~~g~--~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      +.    .+.||.|| |+--.  ...++.+++.++++ |.++.=.
T Consensus       186 l~~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~G-GvIV~DN  228 (278)
T PLN02476        186 MIQNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVG-GVIVMDN  228 (278)
T ss_pred             HHhcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEec
Confidence            42    23799997 55433  33478889999997 8876544

>PRK08862 short chain dehydrogenase; Provisional

Probab=95.82  E-value=0.064  Score=47.22  Aligned_cols=80  Identities=9%  Similarity=0.048  Sum_probs=50.9

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcc-eEEcCCCCCCccHHHHHHHhhC--C-
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--G-  253 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~-~v~~~~~~~~~~~~~~i~~~~~--g-  253 (371)
                      +++++||+|+ +++|.+.+.-+...|+ +|+.+.++.++.+.+.    +.+.+ ..+.-+..+.++..+.+.+...  + 
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR   82 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4789999998 8999998888888999 8999998888765442    23432 1221111111223222332221  3 


Q ss_pred             CcCEEEECCC
Q 017457          254 GADYCFECIG  263 (371)
Q Consensus       254 g~d~vid~~g  263 (371)
                      .+|+++++.|
T Consensus        83 ~iD~li~nag   92 (227)
T PRK08862         83 APDVLVNNWT   92 (227)
T ss_pred             CCCEEEECCc
Confidence            6899999886

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.81  E-value=0.2  Score=41.63  Aligned_cols=88  Identities=19%  Similarity=0.246  Sum_probs=59.6

Q ss_pred             CeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCC
Q 017457          185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL  264 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~  264 (371)
                      .+|-++|.|.+|...+.-+...|+ +|++.++++++.+.+.+.|+...        .+..+.+.     ..|+||-|+.+
T Consensus         2 ~~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~--------~s~~e~~~-----~~dvvi~~v~~   67 (163)
T PF03446_consen    2 MKIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVA--------DSPAEAAE-----QADVVILCVPD   67 (163)
T ss_dssp             BEEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEE--------SSHHHHHH-----HBSEEEE-SSS
T ss_pred             CEEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhh--------hhhhhHhh-----cccceEeeccc
Confidence            368899999999998888888999 99999999999999888875432        23333333     36899988887


Q ss_pred             hHHHHHHHH------HhhcCCceEEEECc
Q 017457          265 TSVMNDAFN------SSREGWGKTVILGV  287 (371)
Q Consensus       265 ~~~~~~~~~------~l~~~~G~~v~~g~  287 (371)
                      .......+.      .+.++ ..+++++.
T Consensus        68 ~~~v~~v~~~~~i~~~l~~g-~iiid~sT   95 (163)
T PF03446_consen   68 DDAVEAVLFGENILAGLRPG-KIIIDMST   95 (163)
T ss_dssp             HHHHHHHHHCTTHGGGS-TT-EEEEE-SS
T ss_pred             chhhhhhhhhhHHhhccccc-eEEEecCC
Confidence            654555444      34454 56676664

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK08589 short chain dehydrogenase; Validated

Probab=95.81  E-value=0.058  Score=48.79  Aligned_cols=79  Identities=23%  Similarity=0.306  Sum_probs=49.0

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh---Ccc-eE--EcCCCCCCccHHHHHHHhhC--C
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF---GIT-DF--INPATCGDKTVSQVIKEMTD--G  253 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l---ga~-~v--~~~~~~~~~~~~~~i~~~~~--g  253 (371)
                      +++++||+|+ +++|.+.+..+...|+ +|++++++++..+.++++   +.+ ..  .|-.+  ..+....+.+...  +
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g   81 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISD--EQQVKDFASEIKEQFG   81 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCC--HHHHHHHHHHHHHHcC
Confidence            5789999998 9999998888888899 899998883322223332   321 12  23222  1222233333322  3


Q ss_pred             CcCEEEECCCC
Q 017457          254 GADYCFECIGL  264 (371)
Q Consensus       254 g~d~vid~~g~  264 (371)
                      .+|+++++.|.
T Consensus        82 ~id~li~~Ag~   92 (272)
T PRK08589         82 RVDVLFNNAGV   92 (272)
T ss_pred             CcCEEEECCCC
Confidence            68999988763

>PRK06198 short chain dehydrogenase; Provisional

Probab=95.81  E-value=0.054  Score=48.48  Aligned_cols=81  Identities=20%  Similarity=0.170  Sum_probs=51.2

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHH----HHHhCcce---EEcCCCCCCccHHHHHHHhh--
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEI----GKKFGITD---FINPATCGDKTVSQVIKEMT--  251 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~----~~~lga~~---v~~~~~~~~~~~~~~i~~~~--  251 (371)
                      -++++++|+|+ |++|...++.+...|+++|++++++.++.+.    ++..+...   ..|..+  ...+.+.+....  
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   81 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSD--VEDCRRVVAAADEA   81 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHH
Confidence            35789999998 9999999999999999449999988765542    22334321   123222  122222222221  


Q ss_pred             CCCcCEEEECCCC
Q 017457          252 DGGADYCFECIGL  264 (371)
Q Consensus       252 ~gg~d~vid~~g~  264 (371)
                      -+++|+++++.+.
T Consensus        82 ~g~id~li~~ag~   94 (260)
T PRK06198         82 FGRLDALVNAAGL   94 (260)
T ss_pred             hCCCCEEEECCCc
Confidence            1379999999874

>PRK07024 short chain dehydrogenase; Provisional

Probab=95.81  E-value=0.068  Score=47.83  Aligned_cols=77  Identities=14%  Similarity=0.115  Sum_probs=49.7

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCc--c-eEE--cCCCCCCccHHHHHHHhhC--CC
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGI--T-DFI--NPATCGDKTVSQVIKEMTD--GG  254 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga--~-~v~--~~~~~~~~~~~~~i~~~~~--gg  254 (371)
                      ++++||+|+ |++|...+..+...|+ +|++++++.++.+.+.+ +..  + ..+  |-.+  .+...+.+.+...  +.
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~g~   78 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRD--ADALAAAAADFIAAHGL   78 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCC--HHHHHHHHHHHHHhCCC
Confidence            468999997 9999999988888899 89999998877665433 221  1 122  2221  1223332233222  26


Q ss_pred             cCEEEECCC
Q 017457          255 ADYCFECIG  263 (371)
Q Consensus       255 ~d~vid~~g  263 (371)
                      +|+++++.|
T Consensus        79 id~lv~~ag   87 (257)
T PRK07024         79 PDVVIANAG   87 (257)
T ss_pred             CCEEEECCC
Confidence            899999876

>PRK06125 short chain dehydrogenase; Provisional

Probab=95.79  E-value=0.089  Score=47.10  Aligned_cols=79  Identities=18%  Similarity=0.212  Sum_probs=50.3

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-h----Ccc-eEEcCCCCCCccHHHHHHHhhCCCc
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F----GIT-DFINPATCGDKTVSQVIKEMTDGGA  255 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l----ga~-~v~~~~~~~~~~~~~~i~~~~~gg~  255 (371)
                      .++++||+|+ +++|...++.+...|+ +|+++++++++.+.+.+ +    +.. .++..+- .+.+-...+.+.. +.+
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~~-g~i   82 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDL-SSPEAREQLAAEA-GDI   82 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecC-CCHHHHHHHHHHh-CCC
Confidence            4789999998 9999999988888999 99999988876655332 2    322 2222111 0122222222211 379


Q ss_pred             CEEEECCCC
Q 017457          256 DYCFECIGL  264 (371)
Q Consensus       256 d~vid~~g~  264 (371)
                      |+++++.|.
T Consensus        83 d~lv~~ag~   91 (259)
T PRK06125         83 DILVNNAGA   91 (259)
T ss_pred             CEEEECCCC
Confidence            999998774

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=95.79  E-value=0.065  Score=47.90  Aligned_cols=81  Identities=19%  Similarity=0.203  Sum_probs=50.5

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HHhCcce-EEcCCCCCCccHHHHHHHhh--CCC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMT--DGG  254 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~~-v~~~~~~~~~~~~~~i~~~~--~gg  254 (371)
                      +++++||+|+ |.+|...+..+...|+ +|+++++++++.+.+    ++.+.+. .+..+-.+.....+.+....  -+.
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   84 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS   84 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4789999998 9999999998888999 899999888655443    2334332 22211101122222222221  126


Q ss_pred             cCEEEECCCC
Q 017457          255 ADYCFECIGL  264 (371)
Q Consensus       255 ~d~vid~~g~  264 (371)
                      +|+++.+.|.
T Consensus        85 ~d~vi~~ag~   94 (262)
T PRK13394         85 VDILVSNAGI   94 (262)
T ss_pred             CCEEEECCcc
Confidence            8999998874

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=95.79  E-value=0.062  Score=49.97  Aligned_cols=78  Identities=21%  Similarity=0.186  Sum_probs=49.9

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhC---cc-eEE--cCCCCCCccHHHHHHHhh--C
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFG---IT-DFI--NPATCGDKTVSQVIKEMT--D  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lg---a~-~v~--~~~~~~~~~~~~~i~~~~--~  252 (371)
                      +++++||+|+ |++|...++.+...|+ +|++++++.++.+.+ +++.   .. .++  |-.+  .....+.+.+..  .
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~   81 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGD--LDSVRRFVDDFRALG   81 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCC--HHHHHHHHHHHHHhC
Confidence            5789999998 9999999888888898 899999888776543 2232   11 122  2222  122222222221  2


Q ss_pred             CCcCEEEECCC
Q 017457          253 GGADYCFECIG  263 (371)
Q Consensus       253 gg~d~vid~~g  263 (371)
                      +.+|++|++.|
T Consensus        82 ~~iD~li~nAg   92 (322)
T PRK07453         82 KPLDALVCNAA   92 (322)
T ss_pred             CCccEEEECCc
Confidence            26999999877

>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases

Probab=95.78  E-value=0.036  Score=47.90  Aligned_cols=105  Identities=23%  Similarity=0.306  Sum_probs=69.0

Q ss_pred             HHcCCCCCCeEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHHHHHHh
Q 017457          177 KVAGVEVGSTVAIFGLGAVGLAVAEGARLN--RASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEM  250 (371)
Q Consensus       177 ~~~~~~~g~~VLI~G~g~~G~~ai~la~~~--g~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~  250 (371)
                      ...+..+.++||-+|.+. |..++.+|+++  +. +|+.++.++++.+.+++    .|...-+....   .+..+.+.++
T Consensus        39 ~l~~~~~~k~vLEIGt~~-GySal~la~~l~~~g-~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~---gda~~~l~~l  113 (205)
T PF01596_consen   39 MLVRLTRPKRVLEIGTFT-GYSALWLAEALPEDG-KITTIEIDPERAEIARENFRKAGLDDRIEVIE---GDALEVLPEL  113 (205)
T ss_dssp             HHHHHHT-SEEEEESTTT-SHHHHHHHHTSTTTS-EEEEEESSHHHHHHHHHHHHHTTGGGGEEEEE---S-HHHHHHHH
T ss_pred             HHHHhcCCceEEEecccc-ccHHHHHHHhhcccc-eEEEecCcHHHHHHHHHHHHhcCCCCcEEEEE---eccHhhHHHH
Confidence            345566778999999754 78888888876  45 99999999998777754    45432122222   3445555555


Q ss_pred             hC----CCcCEEE-ECCCCh--HHHHHHHHHhhcCCceEEEECc
Q 017457          251 TD----GGADYCF-ECIGLT--SVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       251 ~~----gg~d~vi-d~~g~~--~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      ..    +.||.|| |+--..  ..+..+++.++++ |.++.=..
T Consensus       114 ~~~~~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~g-gvii~DN~  156 (205)
T PF01596_consen  114 ANDGEEGQFDFVFIDADKRNYLEYFEKALPLLRPG-GVIIADNV  156 (205)
T ss_dssp             HHTTTTTSEEEEEEESTGGGHHHHHHHHHHHEEEE-EEEEEETT
T ss_pred             HhccCCCceeEEEEcccccchhhHHHHHhhhccCC-eEEEEccc
Confidence            42    3699997 765442  2467888999997 77765543

The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.77  E-value=0.063  Score=47.97  Aligned_cols=80  Identities=14%  Similarity=0.214  Sum_probs=48.8

Q ss_pred             CCCeEEEEcCC---hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcc--eEEcCCCCCCccHHHHHHHhhC--CCc
Q 017457          183 VGSTVAIFGLG---AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT--DFINPATCGDKTVSQVIKEMTD--GGA  255 (371)
Q Consensus       183 ~g~~VLI~G~g---~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~--~v~~~~~~~~~~~~~~i~~~~~--gg~  255 (371)
                      .++++||+|++   ++|.+.++.+...|+ +|+++.++++..+.++++...  ..+.-+-.+.++..+.+.+...  +.+
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   84 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKI   84 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            57899999874   899998888888999 899988875434444443221  1221111011223333333222  379


Q ss_pred             CEEEECCC
Q 017457          256 DYCFECIG  263 (371)
Q Consensus       256 d~vid~~g  263 (371)
                      |+++++.|
T Consensus        85 D~lv~nAg   92 (252)
T PRK06079         85 DGIVHAIA   92 (252)
T ss_pred             CEEEEccc
Confidence            99998876

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=95.77  E-value=0.055  Score=48.43  Aligned_cols=78  Identities=21%  Similarity=0.251  Sum_probs=49.4

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH---hCcce-E--EcCCCCCCccHHHHHHHhhC--C
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK---FGITD-F--INPATCGDKTVSQVIKEMTD--G  253 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~---lga~~-v--~~~~~~~~~~~~~~i~~~~~--g  253 (371)
                      +++++||+|+ |++|.+.++.+...|+ +|+++++++...+...+   .+.+. .  .|..+  .++..+.+.+...  +
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~   83 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLET--YAGAQAAMAAAVEAFG   83 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCC--HHHHHHHHHHHHHHcC
Confidence            4689999998 9999999998888999 89999887543333332   24321 1  23222  1222333333222  3


Q ss_pred             CcCEEEECCC
Q 017457          254 GADYCFECIG  263 (371)
Q Consensus       254 g~d~vid~~g  263 (371)
                      .+|+++++.|
T Consensus        84 ~id~lv~nAg   93 (260)
T PRK12823         84 RIDVLINNVG   93 (260)
T ss_pred             CCeEEEECCc
Confidence            7999999886

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=95.76  E-value=0.061  Score=48.11  Aligned_cols=80  Identities=16%  Similarity=0.243  Sum_probs=49.3

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-----hCc--ceEEcCCCCCCccHHHHHHHhhC--C
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-----FGI--TDFINPATCGDKTVSQVIKEMTD--G  253 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-----lga--~~v~~~~~~~~~~~~~~i~~~~~--g  253 (371)
                      ++++||+|+ |.+|.+.+..+...|+ +|+.++++.++.+.+.+     .+.  .+.+..+-.+..+..+.+.+...  +
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   80 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFG   80 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            578999998 9999999888888899 89999988765544322     121  12222221011222222333221  3


Q ss_pred             CcCEEEECCCC
Q 017457          254 GADYCFECIGL  264 (371)
Q Consensus       254 g~d~vid~~g~  264 (371)
                      .+|+++++.|.
T Consensus        81 ~id~vv~~ag~   91 (259)
T PRK12384         81 RVDLLVYNAGI   91 (259)
T ss_pred             CCCEEEECCCc
Confidence            78999998863

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=95.76  E-value=0.035  Score=45.93  Aligned_cols=80  Identities=24%  Similarity=0.250  Sum_probs=48.6

Q ss_pred             CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC--hhHHHHH----HHhCcc-eEEcCCCCCCccHHHHHHHhh--CCC
Q 017457          185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN--PEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMT--DGG  254 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~--~~~~~~~----~~lga~-~v~~~~~~~~~~~~~~i~~~~--~gg  254 (371)
                      +++||+|+ +++|.+.++.+...|..+|+.+.++  .++.+.+    +..+.. .++..+-.+.++....+.+..  .+.
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            57999998 9999998887777777688888888  4433332    333432 223222111233333333333  237


Q ss_pred             cCEEEECCCC
Q 017457          255 ADYCFECIGL  264 (371)
Q Consensus       255 ~d~vid~~g~  264 (371)
                      +|++|++.|.
T Consensus        81 ld~li~~ag~   90 (167)
T PF00106_consen   81 LDILINNAGI   90 (167)
T ss_dssp             ESEEEEECSC
T ss_pred             cccccccccc
Confidence            8999988875

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK12367 short chain dehydrogenase; Provisional

Probab=95.74  E-value=0.075  Score=47.42  Aligned_cols=75  Identities=21%  Similarity=0.290  Sum_probs=47.1

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP-EKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~-~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      .++++||+|+ |++|.+.++.+...|+ +|++++++. ++.+... .+....+..+-   .+. +.+.+.. +.+|++++
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~---~~~-~~~~~~~-~~iDilVn   85 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESND-ESPNEWIKWEC---GKE-ESLDKQL-ASLDVLIL   85 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhc-cCCCeEEEeeC---CCH-HHHHHhc-CCCCEEEE
Confidence            4689999998 9999999998888999 899888775 2222211 11122222111   122 2233332 36999999


Q ss_pred             CCCC
Q 017457          261 CIGL  264 (371)
Q Consensus       261 ~~g~  264 (371)
                      +.|.
T Consensus        86 nAG~   89 (245)
T PRK12367         86 NHGI   89 (245)
T ss_pred             CCcc
Confidence            8874

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=95.74  E-value=0.065  Score=47.84  Aligned_cols=79  Identities=20%  Similarity=0.296  Sum_probs=49.5

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH--HHHHHHhCcce-E--EcCCCCCCccHHHHHHHhh--CCC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK--FEIGKKFGITD-F--INPATCGDKTVSQVIKEMT--DGG  254 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~--~~~~~~lga~~-v--~~~~~~~~~~~~~~i~~~~--~gg  254 (371)
                      +++++||+|+ +++|.+.++.+...|+ +|+++.++...  .+.+++.+.+. +  .|-.+  .++..+.+.+..  -++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~   83 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQ--QKDIDSIVSQAVEVMGH   83 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCC--HHHHHHHHHHHHHHcCC
Confidence            5789999998 9999999998888999 88888765421  22334444321 2  23222  123333333322  137


Q ss_pred             cCEEEECCCC
Q 017457          255 ADYCFECIGL  264 (371)
Q Consensus       255 ~d~vid~~g~  264 (371)
                      +|+++++.|.
T Consensus        84 iD~lv~~ag~   93 (251)
T PRK12481         84 IDILINNAGI   93 (251)
T ss_pred             CCEEEECCCc
Confidence            8999998773

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=95.74  E-value=0.09  Score=45.33  Aligned_cols=81  Identities=32%  Similarity=0.398  Sum_probs=57.1

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      -.|++++|.|.|.+|..+++.+...|+ +|+++++++++.+.+.+ +|+. .++.++     +       ....+|+++.
T Consensus        26 l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~-~v~~~~-----l-------~~~~~Dv~vp   91 (200)
T cd01075          26 LEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGAT-VVAPEE-----I-------YSVDADVFAP   91 (200)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE-EEcchh-----h-------ccccCCEEEe
Confidence            467899999999999999999999999 99999999888777654 4643 333221     1       1115888886


Q ss_pred             CCCChHHHHHHHHHhh
Q 017457          261 CIGLTSVMNDAFNSSR  276 (371)
Q Consensus       261 ~~g~~~~~~~~~~~l~  276 (371)
                      |..+...-...++.++
T Consensus        92 ~A~~~~I~~~~~~~l~  107 (200)
T cd01075          92 CALGGVINDDTIPQLK  107 (200)
T ss_pred             cccccccCHHHHHHcC
Confidence            6554443445556664

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK06482 short chain dehydrogenase; Provisional

Probab=95.74  E-value=0.068  Score=48.36  Aligned_cols=77  Identities=17%  Similarity=0.152  Sum_probs=50.5

Q ss_pred             CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh-Ccc-eE--EcCCCCCCccHHHHHHHhh--CCCcCE
Q 017457          185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GIT-DF--INPATCGDKTVSQVIKEMT--DGGADY  257 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l-ga~-~v--~~~~~~~~~~~~~~i~~~~--~gg~d~  257 (371)
                      +++||+|+ |.+|...++.+...|+ +|+++.+++++.+.+++. +.. .+  .|..+  ...+.+.+.+..  .+++|+
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~   79 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTD--SAAVRAVVDRAFAALGRIDV   79 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCC--HHHHHHHHHHHHHHcCCCCE
Confidence            57999997 9999999988888899 899999988877665442 221 12  22222  122223333222  137899


Q ss_pred             EEECCCC
Q 017457          258 CFECIGL  264 (371)
Q Consensus       258 vid~~g~  264 (371)
                      +|++.|.
T Consensus        80 vi~~ag~   86 (276)
T PRK06482         80 VVSNAGY   86 (276)
T ss_pred             EEECCCC
Confidence            9998774

>PRK06483 dihydromonapterin reductase; Provisional

Probab=95.74  E-value=0.08  Score=46.65  Aligned_cols=78  Identities=15%  Similarity=0.098  Sum_probs=50.0

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH-HHHHHHhCcceE-EcCCCCCCccHHHHHHHhhC--CCcCEE
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-FEIGKKFGITDF-INPATCGDKTVSQVIKEMTD--GGADYC  258 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~-~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~--gg~d~v  258 (371)
                      ++++||+|+ +++|.+.++.+...|+ +|++++++++. .+.+++.++..+ .|-.+  ..+..+.+.+...  +++|++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~l   78 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFST--NAGIMAFIDELKQHTDGLRAI   78 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCC--HHHHHHHHHHHHhhCCCccEE
Confidence            468999998 9999999998888999 89999877643 333444554221 23221  1233333333322  268999


Q ss_pred             EECCCC
Q 017457          259 FECIGL  264 (371)
Q Consensus       259 id~~g~  264 (371)
                      +++.|.
T Consensus        79 v~~ag~   84 (236)
T PRK06483         79 IHNASD   84 (236)
T ss_pred             EECCcc
Confidence            998774

>PRK05876 short chain dehydrogenase; Provisional

Probab=95.73  E-value=0.07  Score=48.43  Aligned_cols=79  Identities=19%  Similarity=0.263  Sum_probs=50.6

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcc-eEE--cCCCCCCccHHHHHHHhhC--
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFI--NPATCGDKTVSQVIKEMTD--  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~-~v~--~~~~~~~~~~~~~i~~~~~--  252 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+.    ..+.+ ..+  |-.+  ..+..+.+.+...  
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~   81 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRH--REEVTHLADEAFRLL   81 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCC--HHHHHHHHHHHHHHc
Confidence            5789999997 9999999998888999 8999988876655432    23432 122  2211  1222222222221  


Q ss_pred             CCcCEEEECCCC
Q 017457          253 GGADYCFECIGL  264 (371)
Q Consensus       253 gg~d~vid~~g~  264 (371)
                      +.+|+++++.|.
T Consensus        82 g~id~li~nAg~   93 (275)
T PRK05876         82 GHVDVVFSNAGI   93 (275)
T ss_pred             CCCCEEEECCCc
Confidence            368999998873

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=95.72  E-value=0.28  Score=44.24  Aligned_cols=102  Identities=17%  Similarity=0.157  Sum_probs=60.3

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-------------------H----HHHHHHhCcc-eEEcCCCC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE-------------------K----FEIGKKFGIT-DFINPATC  238 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~-------------------~----~~~~~~lga~-~v~~~~~~  238 (371)
                      .+.+|+|+|+|++|..++..+-..|..+++.++...-                   |    .+++.++..+ .+....++
T Consensus        29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~  108 (268)
T PRK15116         29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDF  108 (268)
T ss_pred             cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecc
Confidence            4578999999999999999999999889999885411                   1    1122233322 22222211


Q ss_pred             CCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECc
Q 017457          239 GDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       239 ~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      ..   .+.+.++....+|+|+||.+....-..+.+......=.++..+.
T Consensus       109 i~---~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gG  154 (268)
T PRK15116        109 IT---PDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGG  154 (268)
T ss_pred             cC---hhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence            11   12233333337999999999865344444444443135666654

>PRK08251 short chain dehydrogenase; Provisional

Probab=95.71  E-value=0.079  Score=47.01  Aligned_cols=77  Identities=21%  Similarity=0.260  Sum_probs=49.7

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----h--Ccc-eEE--cCCCCCCccHHHHHHHhhC-
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----F--GIT-DFI--NPATCGDKTVSQVIKEMTD-  252 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----l--ga~-~v~--~~~~~~~~~~~~~i~~~~~-  252 (371)
                      ++++||+|+ |++|...+..+...|+ +|+++++++++.+.+..    .  +.. +++  |..+  .+++.+.+.+... 
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   78 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVND--HDQVFEVFAEFRDE   78 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            578999998 9999998888877898 89999988877655432    1  211 222  3222  1233333333322 


Q ss_pred             -CCcCEEEECCC
Q 017457          253 -GGADYCFECIG  263 (371)
Q Consensus       253 -gg~d~vid~~g  263 (371)
                       +++|+++++.|
T Consensus        79 ~~~id~vi~~ag   90 (248)
T PRK08251         79 LGGLDRVIVNAG   90 (248)
T ss_pred             cCCCCEEEECCC
Confidence             37899999876

>PRK06914 short chain dehydrogenase; Provisional

Probab=95.71  E-value=0.069  Score=48.42  Aligned_cols=78  Identities=15%  Similarity=0.163  Sum_probs=50.3

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCc---ceEE--cCCCCCCccHHHHHHHhhC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI---TDFI--NPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga---~~v~--~~~~~~~~~~~~~i~~~~~  252 (371)
                      .++++||+|+ |.+|...+..+...|+ +|++++++.++.+.+.+    .+.   ..++  |..+  .+++.+ +.+...
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~-~~~~~~   77 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTD--QNSIHN-FQLVLK   77 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCC--HHHHHH-HHHHHH
Confidence            3578999998 9999999988888899 89999888776554432    221   1222  3222  122322 333322


Q ss_pred             --CCcCEEEECCCC
Q 017457          253 --GGADYCFECIGL  264 (371)
Q Consensus       253 --gg~d~vid~~g~  264 (371)
                        +++|+++.+.|.
T Consensus        78 ~~~~id~vv~~ag~   91 (280)
T PRK06914         78 EIGRIDLLVNNAGY   91 (280)
T ss_pred             hcCCeeEEEECCcc
Confidence              378999998763

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=95.69  E-value=0.064  Score=54.90  Aligned_cols=77  Identities=27%  Similarity=0.308  Sum_probs=55.7

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh---------------------HHHHHHHhCcceEEcCCCCCCc
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE---------------------KFEIGKKFGITDFINPATCGDK  241 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~---------------------~~~~~~~lga~~v~~~~~~~~~  241 (371)
                      .+++|+|+|+|+.|+.++..++..|+ +|++.++.+.                     +.++++++|++..++..-..+.
T Consensus       309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~  387 (639)
T PRK12809        309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI  387 (639)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence            48999999999999999999999999 8988886652                     4566778888766654320011


Q ss_pred             cHHHHHHHhhCCCcCEEEECCCCh
Q 017457          242 TVSQVIKEMTDGGADYCFECIGLT  265 (371)
Q Consensus       242 ~~~~~i~~~~~gg~d~vid~~g~~  265 (371)
                      .+    .++. .++|.||.++|..
T Consensus       388 ~~----~~l~-~~~DaV~latGa~  406 (639)
T PRK12809        388 TF----SDLT-SEYDAVFIGVGTY  406 (639)
T ss_pred             CH----HHHH-hcCCEEEEeCCCC
Confidence            22    2222 2799999998864

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=95.68  E-value=0.11  Score=44.57  Aligned_cols=77  Identities=19%  Similarity=0.184  Sum_probs=50.8

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-h----Ccce-EEcCCCCCCccHHHHHHHhhCCC
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F----GITD-FINPATCGDKTVSQVIKEMTDGG  254 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l----ga~~-v~~~~~~~~~~~~~~i~~~~~gg  254 (371)
                      .++++++|+|+ |.+|.+.+..+...|+ +|+++.++.++.+.+.+ +    +... ..+..+     . +.+.+... +
T Consensus        26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~-----~-~~~~~~~~-~   97 (194)
T cd01078          26 LKGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETSD-----D-AARAAAIK-G   97 (194)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC-----H-HHHHHHHh-c
Confidence            36789999997 9999988888878888 89999998887665433 2    2221 112111     1 11222222 6


Q ss_pred             cCEEEECCCChH
Q 017457          255 ADYCFECIGLTS  266 (371)
Q Consensus       255 ~d~vid~~g~~~  266 (371)
                      +|+||.+++...
T Consensus        98 ~diVi~at~~g~  109 (194)
T cd01078          98 ADVVFAAGAAGV  109 (194)
T ss_pred             CCEEEECCCCCc
Confidence            899999887655

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.68  E-value=0.085  Score=48.01  Aligned_cols=77  Identities=16%  Similarity=0.204  Sum_probs=56.9

Q ss_pred             CCCCCeEEEEcCCh-HHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEE
Q 017457          181 VEVGSTVAIFGLGA-VGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCF  259 (371)
Q Consensus       181 ~~~g~~VLI~G~g~-~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vi  259 (371)
                      .-.|++|+|+|.|+ +|...+.++...|+ +|+++.+...                      ++.+.+     ..+|+++
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t~----------------------~L~~~~-----~~aDIvI  207 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRTQ----------------------NLPELV-----KQADIIV  207 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCch----------------------hHHHHh-----ccCCEEE
Confidence            46789999999976 99999999999999 8888865211                      121111     2689999


Q ss_pred             ECCCChHHHHHHHHHhhcCCceEEEECcc
Q 017457          260 ECIGLTSVMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       260 d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      +++|.+..+.  .+.++++ ..++++|..
T Consensus       208 ~AtG~~~~v~--~~~lk~g-avViDvg~n  233 (283)
T PRK14192        208 GAVGKPELIK--KDWIKQG-AVVVDAGFH  233 (283)
T ss_pred             EccCCCCcCC--HHHcCCC-CEEEEEEEe
Confidence            9998766332  3558887 889999864

>PRK06101 short chain dehydrogenase; Provisional

Probab=95.68  E-value=0.079  Score=46.89  Aligned_cols=43  Identities=16%  Similarity=0.138  Sum_probs=35.8

Q ss_pred             CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhC
Q 017457          185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG  228 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lg  228 (371)
                      +++||+|+ |++|...+..+...|+ +|+++++++++.+.+.+.+
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~   45 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQS   45 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhc
Confidence            57999998 9999988888888899 8999999988877665533

>PRK06114 short chain dehydrogenase; Provisional

Probab=95.67  E-value=0.076  Score=47.41  Aligned_cols=81  Identities=14%  Similarity=0.194  Sum_probs=49.3

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-HHH----HHHHhCcc-eEEcCCCCCCccHHHHHHHhhC--C
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE-KFE----IGKKFGIT-DFINPATCGDKTVSQVIKEMTD--G  253 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~-~~~----~~~~lga~-~v~~~~~~~~~~~~~~i~~~~~--g  253 (371)
                      +++++||+|+ +++|.+.++.+...|+ +|++++++.+ ..+    .++..+.. ..+..+-.+..+..+.+.+...  +
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   85 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG   85 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4789999997 9999999999988999 8888887643 222    22233422 1222111111233333333221  3


Q ss_pred             CcCEEEECCCC
Q 017457          254 GADYCFECIGL  264 (371)
Q Consensus       254 g~d~vid~~g~  264 (371)
                      .+|+++++.|.
T Consensus        86 ~id~li~~ag~   96 (254)
T PRK06114         86 ALTLAVNAAGI   96 (254)
T ss_pred             CCCEEEECCCC
Confidence            78999998874

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=95.65  E-value=0.085  Score=47.15  Aligned_cols=80  Identities=20%  Similarity=0.353  Sum_probs=51.4

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcc-eEEcCCCCCCccHHHHHHHhhC--CCcCE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT-DFINPATCGDKTVSQVIKEMTD--GGADY  257 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~-~v~~~~~~~~~~~~~~i~~~~~--gg~d~  257 (371)
                      .++++||+|+ |++|...+..+...|+ +|+.++++.++.+.+.+ ++.. ..+..+-.+..+..+.+.+...  +.+|+
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDI   83 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            3678999998 9999999999888999 89999998887665433 3321 1222111011223333333221  36899


Q ss_pred             EEECCC
Q 017457          258 CFECIG  263 (371)
Q Consensus       258 vid~~g  263 (371)
                      ++++.+
T Consensus        84 li~~ag   89 (257)
T PRK07067         84 LFNNAA   89 (257)
T ss_pred             EEECCC
Confidence            998876

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]

Probab=95.64  E-value=0.12  Score=45.53  Aligned_cols=103  Identities=22%  Similarity=0.281  Sum_probs=72.0

Q ss_pred             HHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHHHHHHh
Q 017457          176 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEM  250 (371)
Q Consensus       176 ~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~  250 (371)
                      ....++.+|++|+=.|.|. |.+++.||++.|- .+|+..+..++..+.+++    +|....+....   .|.    .+.
T Consensus        87 ~~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~---~Dv----~~~  158 (256)
T COG2519          87 VARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKL---GDV----REG  158 (256)
T ss_pred             HHHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEe---ccc----ccc
Confidence            3567899999999888766 7888889987765 599999988887776644    45433221111   222    222


Q ss_pred             hCC-CcCEEE-ECCCChHHHHHHHHHhhcCCceEEEECc
Q 017457          251 TDG-GADYCF-ECIGLTSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       251 ~~g-g~d~vi-d~~g~~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      ..+ .+|.+| |.-.--..++.+.+.|+++ |.++.+.-
T Consensus       159 ~~~~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~P  196 (256)
T COG2519         159 IDEEDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYSP  196 (256)
T ss_pred             ccccccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEcC
Confidence            222 788886 6655556689999999998 99998864

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=95.63  E-value=0.084  Score=47.14  Aligned_cols=81  Identities=17%  Similarity=0.238  Sum_probs=49.3

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--HHHHHHHhCcc-eEEcCCCCCCccHHHHHHHhhC--CCcC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE--KFEIGKKFGIT-DFINPATCGDKTVSQVIKEMTD--GGAD  256 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~--~~~~~~~lga~-~v~~~~~~~~~~~~~~i~~~~~--gg~d  256 (371)
                      +|+++||+|+ |++|.+.++.+...|+ +|+.+++.+.  ..+.+.+.+.. ..+..+-.+.++..+.+.+...  +.+|
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D   87 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHID   87 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            4789999998 9999999999888999 8888765432  22334444432 1222221111233333333222  3789


Q ss_pred             EEEECCCC
Q 017457          257 YCFECIGL  264 (371)
Q Consensus       257 ~vid~~g~  264 (371)
                      +++++.|.
T Consensus        88 ~li~~Ag~   95 (253)
T PRK08993         88 ILVNNAGL   95 (253)
T ss_pred             EEEECCCC
Confidence            99998874

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=95.63  E-value=0.1  Score=47.36  Aligned_cols=93  Identities=16%  Similarity=0.083  Sum_probs=60.3

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhC---cceEEcCCCCCCccHHHHHHHhhCCCcC
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFG---ITDFINPATCGDKTVSQVIKEMTDGGAD  256 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lg---a~~v~~~~~~~~~~~~~~i~~~~~gg~d  256 (371)
                      ..++++++|+|+|++|.+.+..+...|+ +|+++.+++++.+.+. .+.   ......        +.    +.....+|
T Consensus       114 ~~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~--------~~----~~~~~~~D  180 (270)
T TIGR00507       114 LRPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFS--------MD----ELPLHRVD  180 (270)
T ss_pred             CccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEec--------hh----hhcccCcc
Confidence            3557899999999999998888888898 8999999887765543 332   111211        11    11112689


Q ss_pred             EEEECCCChHH--H---HHHHHHhhcCCceEEEECc
Q 017457          257 YCFECIGLTSV--M---NDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       257 ~vid~~g~~~~--~---~~~~~~l~~~~G~~v~~g~  287 (371)
                      ++++|++....  .   ......++++ ..++++..
T Consensus       181 ivInatp~gm~~~~~~~~~~~~~l~~~-~~v~D~~y  215 (270)
T TIGR00507       181 LIINATSAGMSGNIDEPPVPAEKLKEG-MVVYDMVY  215 (270)
T ss_pred             EEEECCCCCCCCCCCCCCCCHHHcCCC-CEEEEecc
Confidence            99999986420  1   1123456675 67887865

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.60  E-value=0.38  Score=37.14  Aligned_cols=92  Identities=18%  Similarity=0.180  Sum_probs=61.2

Q ss_pred             EEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCChH
Q 017457          187 VAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTS  266 (371)
Q Consensus       187 VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~~~  266 (371)
                      |+|.|.|.+|...++.++..+. +|++++.++++.+.+++.|.. ++..+.    .-.+.+++..-..++.++-++++..
T Consensus         1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd~----~~~~~l~~a~i~~a~~vv~~~~~d~   74 (116)
T PF02254_consen    1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGDA----TDPEVLERAGIEKADAVVILTDDDE   74 (116)
T ss_dssp             EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES-T----TSHHHHHHTTGGCESEEEEESSSHH
T ss_pred             eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccc-cccccc----hhhhHHhhcCccccCEEEEccCCHH
Confidence            6788999999999999999776 899999999999999988855 443333    2233444443338899988877655


Q ss_pred             HH---HHHHHHhhcCCceEEEE
Q 017457          267 VM---NDAFNSSREGWGKTVIL  285 (371)
Q Consensus       267 ~~---~~~~~~l~~~~G~~v~~  285 (371)
                      .-   -...+.+.+. .+++..
T Consensus        75 ~n~~~~~~~r~~~~~-~~ii~~   95 (116)
T PF02254_consen   75 ENLLIALLARELNPD-IRIIAR   95 (116)
T ss_dssp             HHHHHHHHHHHHTTT-SEEEEE
T ss_pred             HHHHHHHHHHHHCCC-CeEEEE
Confidence            22   2233344444 455544

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK12937 short chain dehydrogenase; Provisional

Probab=95.58  E-value=0.24  Score=43.65  Aligned_cols=104  Identities=13%  Similarity=0.144  Sum_probs=59.5

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hHHH----HHHHhCcc-eEEcCCCCCCccHHHHHHHhh--C
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP-EKFE----IGKKFGIT-DFINPATCGDKTVSQVIKEMT--D  252 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~-~~~~----~~~~lga~-~v~~~~~~~~~~~~~~i~~~~--~  252 (371)
                      .+++++||+|+ |++|...+..+...|+ +++.+.++. .+.+    .+.+.+.. ..+..+-.+..+..+.+.+..  .
T Consensus         3 ~~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (245)
T PRK12937          3 LSNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF   81 (245)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            35789999997 9999999999988999 777765543 2222    22233432 222211101122222222221  1


Q ss_pred             CCcCEEEECCCChH-------------------------HHHHHHHHhhcCCceEEEECc
Q 017457          253 GGADYCFECIGLTS-------------------------VMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       253 gg~d~vid~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      +++|++|++.|...                         .++.+++.+... |+++.++.
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss  140 (245)
T PRK12937         82 GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQG-GRIINLST  140 (245)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccC-cEEEEEee
Confidence            37899999887310                         123444555565 88888875

>PRK06701 short chain dehydrogenase; Provisional

Probab=95.58  E-value=0.19  Score=45.96  Aligned_cols=37  Identities=27%  Similarity=0.140  Sum_probs=31.0

Q ss_pred             CCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          181 VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       181 ~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      .-+++++||+|+ |++|...+..+...|+ +|+++.++.
T Consensus        43 ~~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~   80 (290)
T PRK06701         43 KLKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDE   80 (290)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCc
Confidence            445789999998 9999998888888899 888887764

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=95.58  E-value=0.23  Score=43.45  Aligned_cols=101  Identities=15%  Similarity=0.177  Sum_probs=62.5

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh------hHH-----------------HHHHHhCcc-eEEcCCCC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP------EKF-----------------EIGKKFGIT-DFINPATC  238 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~------~~~-----------------~~~~~lga~-~v~~~~~~  238 (371)
                      +..+|+|+|.|++|.+++..+-..|+.++..++...      +|.                 +++++.... +|-..+. 
T Consensus        29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~-  107 (263)
T COG1179          29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIND-  107 (263)
T ss_pred             hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHh-
Confidence            457899999999999999999999999998887422      111                 111122211 2222222 


Q ss_pred             CCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHH-HhhcCCceEEEECc
Q 017457          239 GDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFN-SSREGWGKTVILGV  287 (371)
Q Consensus       239 ~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~-~l~~~~G~~v~~g~  287 (371)
                        .-..+.+.++...++|+|+||..+-.+--.++. |.++. =.+|..+.
T Consensus       108 --f~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~k-i~vIss~G  154 (263)
T COG1179         108 --FITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNK-IPVISSMG  154 (263)
T ss_pred             --hhCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcC-CCEEeecc
Confidence              112234455566699999999997663333444 55554 56776664

>PRK06179 short chain dehydrogenase; Provisional

Probab=95.57  E-value=0.039  Score=49.77  Aligned_cols=77  Identities=19%  Similarity=0.289  Sum_probs=50.1

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceE-EcCCCCCCccHHHHHHHhhC--CCcCEE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMTD--GGADYC  258 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~--gg~d~v  258 (371)
                      .+++++|+|+ |++|...++.+...|+ +|++++++.++.+..  .+...+ .|..+  .+++.+.+.....  +.+|++
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~--~~~~~~~~D~~d--~~~~~~~~~~~~~~~g~~d~l   77 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPI--PGVELLELDVTD--DASVQAAVDEVIARAGRIDVL   77 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccc--CCCeeEEeecCC--HHHHHHHHHHHHHhCCCCCEE
Confidence            4578999998 9999999888888899 899999887654332  122221 23222  1333333333322  368999


Q ss_pred             EECCCC
Q 017457          259 FECIGL  264 (371)
Q Consensus       259 id~~g~  264 (371)
                      |++.|.
T Consensus        78 i~~ag~   83 (270)
T PRK06179         78 VNNAGV   83 (270)
T ss_pred             EECCCC
Confidence            999884

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=95.57  E-value=0.14  Score=45.16  Aligned_cols=105  Identities=17%  Similarity=0.345  Sum_probs=71.3

Q ss_pred             HHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHHHHHHhh
Q 017457          176 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       176 ~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~~  251 (371)
                      .......+|++||=+|+|. |-.|..+++..|..+|+++|.+++-++.+++    .|... +..-.   .+. +.+ ...
T Consensus        44 i~~~~~~~g~~vLDva~GT-Gd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~---~dA-e~L-Pf~  116 (238)
T COG2226          44 ISLLGIKPGDKVLDVACGT-GDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVV---GDA-ENL-PFP  116 (238)
T ss_pred             HHhhCCCCCCEEEEecCCc-cHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEE---ech-hhC-CCC
Confidence            3345566899999987765 8899999999886699999999998777654    22221 11111   111 111 122


Q ss_pred             CCCcCEEEECCCC------hHHHHHHHHHhhcCCceEEEECcc
Q 017457          252 DGGADYCFECIGL------TSVMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       252 ~gg~d~vid~~g~------~~~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      +..||+|.-+.|-      ..+++++.|.|+|+ |+++.+...
T Consensus       117 D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~  158 (238)
T COG2226         117 DNSFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFS  158 (238)
T ss_pred             CCccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcC
Confidence            3378988766553      34689999999998 998888763

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=95.56  E-value=0.11  Score=47.21  Aligned_cols=79  Identities=23%  Similarity=0.325  Sum_probs=55.9

Q ss_pred             CCCCeEEEEcC-ChHHHH-HHHHHHHcCCCeEEEEcCChhHHHHHHH-----hCc---ceEEcCCCCCCccHHHHHHHhh
Q 017457          182 EVGSTVAIFGL-GAVGLA-VAEGARLNRASKIIGVDINPEKFEIGKK-----FGI---TDFINPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~-ai~la~~~g~~~Vi~~~~~~~~~~~~~~-----lga---~~v~~~~~~~~~~~~~~i~~~~  251 (371)
                      +-|++.+|+|+ .++|.+ |-+||+ .|. +|+.+.|+.+|++..++     .++   ..++|..+ +++ .-+.+++..
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~-~~~-~ye~i~~~l  122 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAK-RGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTK-GDE-VYEKLLEKL  122 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCC-Cch-hHHHHHHHh
Confidence            34689999998 899977 666666 999 89999999999887643     332   24556555 112 244555555


Q ss_pred             CC-CcCEEEECCCC
Q 017457          252 DG-GADYCFECIGL  264 (371)
Q Consensus       252 ~g-g~d~vid~~g~  264 (371)
                      .+ .+-+.+|++|-
T Consensus       123 ~~~~VgILVNNvG~  136 (312)
T KOG1014|consen  123 AGLDVGILVNNVGM  136 (312)
T ss_pred             cCCceEEEEecccc
Confidence            55 67788899885

>PRK08264 short chain dehydrogenase; Validated

Probab=95.56  E-value=0.086  Score=46.44  Aligned_cols=75  Identities=17%  Similarity=0.208  Sum_probs=48.6

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcc-eEE--cCCCCCCccHHHHHHHhhCCCcCEE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-DFI--NPATCGDKTVSQVIKEMTDGGADYC  258 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~-~v~--~~~~~~~~~~~~~i~~~~~gg~d~v  258 (371)
                      .++++||+|+ |.+|...+..+...|+++|+++.++.++.+.   .+.. .++  |-.+   .+-.+.+.+.. +.+|++
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~---~~~~~~~~~~~-~~id~v   77 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTD---PASVAAAAEAA-SDVTIL   77 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCC---HHHHHHHHHhc-CCCCEE
Confidence            4678999997 9999999999988998678988887766543   2221 222  2222   22222222211 258999


Q ss_pred             EECCCC
Q 017457          259 FECIGL  264 (371)
Q Consensus       259 id~~g~  264 (371)
                      |.+.|.
T Consensus        78 i~~ag~   83 (238)
T PRK08264         78 VNNAGI   83 (238)
T ss_pred             EECCCc
Confidence            988875

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.55  E-value=0.095  Score=47.24  Aligned_cols=80  Identities=14%  Similarity=0.180  Sum_probs=47.1

Q ss_pred             CCCeEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHHHHHHhhC--C
Q 017457          183 VGSTVAIFGL-G--AVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTD--G  253 (371)
Q Consensus       183 ~g~~VLI~G~-g--~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~~~--g  253 (371)
                      +++++||+|+ +  ++|.+.+..+...|+ +|+.+++++...+.+++    .+....+.-+-.+.++..+.+.+...  +
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   83 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWP   83 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcC
Confidence            5789999997 3  899998888888899 88888776321222322    22222222111111233333333322  3


Q ss_pred             CcCEEEECCC
Q 017457          254 GADYCFECIG  263 (371)
Q Consensus       254 g~d~vid~~g  263 (371)
                      .+|+++++.|
T Consensus        84 ~iD~linnAg   93 (262)
T PRK07984         84 KFDGFVHSIG   93 (262)
T ss_pred             CCCEEEECCc
Confidence            6899999887

>PRK06720 hypothetical protein; Provisional

Probab=95.54  E-value=0.12  Score=43.26  Aligned_cols=39  Identities=26%  Similarity=0.204  Sum_probs=32.8

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHH
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFE  222 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~  222 (371)
                      +++.++|+|+ +++|...+......|+ +|++++++.++.+
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~   54 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQ   54 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHH
Confidence            5789999998 8999998888888899 8999998776543

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=95.54  E-value=0.06  Score=48.77  Aligned_cols=82  Identities=18%  Similarity=0.140  Sum_probs=53.7

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc------eEEcCCCC-CCccHHHHHHH
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT------DFINPATC-GDKTVSQVIKE  249 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~------~v~~~~~~-~~~~~~~~i~~  249 (371)
                      -.|+.+||+|+ .++|.+.+..+...|+ +|+++.+++++.+...+    .+..      .+.|-... ..+...+...+
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~   84 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE   84 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence            46889999987 8999999999999999 99999999988665433    2221      22232220 01112222223


Q ss_pred             hhCCCcCEEEECCCC
Q 017457          250 MTDGGADYCFECIGL  264 (371)
Q Consensus       250 ~~~gg~d~vid~~g~  264 (371)
                      ...|+.|+.++..|.
T Consensus        85 ~~~GkidiLvnnag~   99 (270)
T KOG0725|consen   85 KFFGKIDILVNNAGA   99 (270)
T ss_pred             HhCCCCCEEEEcCCc
Confidence            334579999988774

>PRK07856 short chain dehydrogenase; Provisional

Probab=95.53  E-value=0.066  Score=47.75  Aligned_cols=75  Identities=16%  Similarity=0.236  Sum_probs=48.1

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcc-eE--EcCCCCCCccHHHHHHHhhC--CCcC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-DF--INPATCGDKTVSQVIKEMTD--GGAD  256 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~-~v--~~~~~~~~~~~~~~i~~~~~--gg~d  256 (371)
                      .++++||+|+ |++|.+.++.+...|+ +|++++++.++    ...+.. .+  .|..+  .++..+.+.....  +.+|
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id   77 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRD--PDQVAALVDAIVERHGRLD   77 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh----hhcCCceEEEEccCCC--HHHHHHHHHHHHHHcCCCC
Confidence            5789999998 9999999988888999 89999987655    112211 12  23222  1223333332221  3689


Q ss_pred             EEEECCCC
Q 017457          257 YCFECIGL  264 (371)
Q Consensus       257 ~vid~~g~  264 (371)
                      ++|++.|.
T Consensus        78 ~vi~~ag~   85 (252)
T PRK07856         78 VLVNNAGG   85 (252)
T ss_pred             EEEECCCC
Confidence            99998763

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=95.51  E-value=0.067  Score=47.87  Aligned_cols=80  Identities=20%  Similarity=0.230  Sum_probs=48.8

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HHhCcc-eEEcCCCCCCccHHHHHHHhhC--CC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--GG  254 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~-~v~~~~~~~~~~~~~~i~~~~~--gg  254 (371)
                      .++++||+|+ |++|.+.++.+...|+ +|+++.++ ++.+.+    .+.+.+ .++..+-.+.+...+.+.+...  +.
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   91 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGK   91 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999998 9999999999888999 88888876 333322    223322 2222211111222223333221  36


Q ss_pred             cCEEEECCCC
Q 017457          255 ADYCFECIGL  264 (371)
Q Consensus       255 ~d~vid~~g~  264 (371)
                      +|+++++.|.
T Consensus        92 id~li~~ag~  101 (258)
T PRK06935         92 IDILVNNAGT  101 (258)
T ss_pred             CCEEEECCCC
Confidence            8999998774

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=95.50  E-value=0.089  Score=46.59  Aligned_cols=81  Identities=17%  Similarity=0.185  Sum_probs=49.4

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HHhCcc-eEEcCCCCCCccHHHHHHHhhC--CC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--GG  254 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~-~v~~~~~~~~~~~~~~i~~~~~--gg  254 (371)
                      .++++||+|+ |.+|...+..+...|+ +|++++++.++...+    ...+.. .++..+-.+...+.+.+.+...  +.
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR   83 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            4679999998 9999999888888899 899999886554332    222322 1222111011222222222221  26


Q ss_pred             cCEEEECCCC
Q 017457          255 ADYCFECIGL  264 (371)
Q Consensus       255 ~d~vid~~g~  264 (371)
                      +|+++++.+.
T Consensus        84 ~d~vi~~ag~   93 (251)
T PRK12826         84 LDILVANAGI   93 (251)
T ss_pred             CCEEEECCCC
Confidence            8999988754

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=95.50  E-value=0.1  Score=45.58  Aligned_cols=93  Identities=13%  Similarity=0.024  Sum_probs=58.5

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-HHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE-KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~-~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      .++.+|||+|+|.++.-=+..+...|+ +|+++++.-. .+..+.+.|.-..+. ++     +...  .+  .++++||-
T Consensus        23 ~~~~~VLVVGGG~VA~RK~~~Ll~~gA-~VtVVap~i~~el~~l~~~~~i~~~~-r~-----~~~~--dl--~g~~LVia   91 (223)
T PRK05562         23 SNKIKVLIIGGGKAAFIKGKTFLKKGC-YVYILSKKFSKEFLDLKKYGNLKLIK-GN-----YDKE--FI--KDKHLIVI   91 (223)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCCCHHHHHHHhCCCEEEEe-CC-----CChH--Hh--CCCcEEEE
Confidence            357899999999999988888888999 8888875432 222232333222221 12     1111  11  27899999


Q ss_pred             CCCChHHHHHHHHHh-hcCCceEEEECc
Q 017457          261 CIGLTSVMNDAFNSS-REGWGKTVILGV  287 (371)
Q Consensus       261 ~~g~~~~~~~~~~~l-~~~~G~~v~~g~  287 (371)
                      +++++. ++..+... +.. +.++....
T Consensus        92 ATdD~~-vN~~I~~~a~~~-~~lvn~vd  117 (223)
T PRK05562         92 ATDDEK-LNNKIRKHCDRL-YKLYIDCS  117 (223)
T ss_pred             CCCCHH-HHHHHHHHHHHc-CCeEEEcC
Confidence            999988 55555544 444 66666654

>PRK04457 spermidine synthase; Provisional

Probab=95.49  E-value=0.2  Score=45.22  Aligned_cols=94  Identities=16%  Similarity=0.220  Sum_probs=64.7

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh-Cc----c--eEEcCCCCCCccHHHHHHHhhCCC
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GI----T--DFINPATCGDKTVSQVIKEMTDGG  254 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l-ga----~--~v~~~~~~~~~~~~~~i~~~~~gg  254 (371)
                      .++++||++|.|+ |.++..+++.....+|++++.+++-.+.+++. +.    +  .++.      .+..+.+... .+.
T Consensus        65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~------~Da~~~l~~~-~~~  136 (262)
T PRK04457         65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIE------ADGAEYIAVH-RHS  136 (262)
T ss_pred             CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEE------CCHHHHHHhC-CCC
Confidence            4568899999876 77888888776433899999999988888763 31    1  2222      2344444332 237


Q ss_pred             cCEEE-ECCCC---------hHHHHHHHHHhhcCCceEEE
Q 017457          255 ADYCF-ECIGL---------TSVMNDAFNSSREGWGKTVI  284 (371)
Q Consensus       255 ~d~vi-d~~g~---------~~~~~~~~~~l~~~~G~~v~  284 (371)
                      +|+|+ |...+         ...++.+.+.|+++ |.++.
T Consensus       137 yD~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvi  175 (262)
T PRK04457        137 TDVILVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVV  175 (262)
T ss_pred             CCEEEEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEE
Confidence            99997 54322         24578899999998 99876

>PRK07574 formate dehydrogenase; Provisional

Probab=95.48  E-value=0.15  Score=48.61  Aligned_cols=89  Identities=22%  Similarity=0.246  Sum_probs=56.4

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  262 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~  262 (371)
                      .|++|.|+|.|.+|...++.++..|. +|++.+++....+..+.+|+...        .++.+.+    . ..|+|+.+.
T Consensus       191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g~~~~--------~~l~ell----~-~aDvV~l~l  256 (385)
T PRK07574        191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELGLTYH--------VSFDSLV----S-VCDVVTIHC  256 (385)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcCceec--------CCHHHHh----h-cCCEEEEcC
Confidence            57899999999999999999999999 99999987643333334443211        1222221    1 467777665


Q ss_pred             CChHHH-----HHHHHHhhcCCceEEEEC
Q 017457          263 GLTSVM-----NDAFNSSREGWGKTVILG  286 (371)
Q Consensus       263 g~~~~~-----~~~~~~l~~~~G~~v~~g  286 (371)
                      +.....     ...+..|+++ ..+|.++
T Consensus       257 Plt~~T~~li~~~~l~~mk~g-a~lIN~a  284 (385)
T PRK07574        257 PLHPETEHLFDADVLSRMKRG-SYLVNTA  284 (385)
T ss_pred             CCCHHHHHHhCHHHHhcCCCC-cEEEECC
Confidence            532211     2445566665 6666655

>PRK08226 short chain dehydrogenase; Provisional

Probab=95.48  E-value=0.1  Score=46.75  Aligned_cols=79  Identities=24%  Similarity=0.333  Sum_probs=49.4

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH---hCcc-eEE--cCCCCCCccHHHHHHHhh--CC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK---FGIT-DFI--NPATCGDKTVSQVIKEMT--DG  253 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~---lga~-~v~--~~~~~~~~~~~~~i~~~~--~g  253 (371)
                      +++++||+|+ |++|...+..+...|+ +|+.++++++..+...+   .+.. ..+  |-.+  ..+..+.+.+..  .+
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~~   81 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRD--PASVAAAIKRAKEKEG   81 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence            4689999998 9999999998888999 89999988754333332   2322 122  2211  122222222221  13


Q ss_pred             CcCEEEECCCC
Q 017457          254 GADYCFECIGL  264 (371)
Q Consensus       254 g~d~vid~~g~  264 (371)
                      .+|++|++.|.
T Consensus        82 ~id~vi~~ag~   92 (263)
T PRK08226         82 RIDILVNNAGV   92 (263)
T ss_pred             CCCEEEECCCc
Confidence            68999998873

>PRK12747 short chain dehydrogenase; Provisional

Probab=95.46  E-value=0.31  Score=43.35  Aligned_cols=38  Identities=18%  Similarity=0.128  Sum_probs=30.5

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhHH
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVD-INPEKF  221 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~-~~~~~~  221 (371)
                      .++++||+|+ +++|.+.++.+...|+ +|+++. +..++.
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~   42 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEA   42 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHH
Confidence            4789999998 9999999999988999 787764 444443

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=95.45  E-value=0.15  Score=42.72  Aligned_cols=93  Identities=13%  Similarity=0.265  Sum_probs=60.8

Q ss_pred             eEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCC
Q 017457          186 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL  264 (371)
Q Consensus       186 ~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~  264 (371)
                      +|.|+|+ |-+|...++-|+.+|. .|+++.+++.|....+..   .++..+-   .+..+....+  .|+|+||++.+.
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~---~i~q~Di---fd~~~~a~~l--~g~DaVIsA~~~   72 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGV---TILQKDI---FDLTSLASDL--AGHDAVISAFGA   72 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccc---eeecccc---cChhhhHhhh--cCCceEEEeccC
Confidence            5788898 9999999999999999 999999999887654221   1221111   1111111112  189999998875


Q ss_pred             hH---------HHHHHHHHhhcC-CceEEEECc
Q 017457          265 TS---------VMNDAFNSSREG-WGKTVILGV  287 (371)
Q Consensus       265 ~~---------~~~~~~~~l~~~-~G~~v~~g~  287 (371)
                      ..         ..+.++..++.. .-++..+|.
T Consensus        73 ~~~~~~~~~~k~~~~li~~l~~agv~RllVVGG  105 (211)
T COG2910          73 GASDNDELHSKSIEALIEALKGAGVPRLLVVGG  105 (211)
T ss_pred             CCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcC
Confidence            41         244567777763 137777775

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=95.44  E-value=0.11  Score=45.79  Aligned_cols=81  Identities=17%  Similarity=0.197  Sum_probs=50.8

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhCcc-eEEcCCCCCCccHHHHHHHhhC--CCcCE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGIT-DFINPATCGDKTVSQVIKEMTD--GGADY  257 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga~-~v~~~~~~~~~~~~~~i~~~~~--gg~d~  257 (371)
                      +++++||+|+ |.+|...+..+...|+ +|+...++.++.+.+. .++.. .++..+-.+.+...+.+.+...  +++|+
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI   83 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4689999998 9999999888888998 8888888877666543 34422 1222111011222222222221  37899


Q ss_pred             EEECCCC
Q 017457          258 CFECIGL  264 (371)
Q Consensus       258 vid~~g~  264 (371)
                      ++++.|.
T Consensus        84 vi~~ag~   90 (245)
T PRK12936         84 LVNNAGI   90 (245)
T ss_pred             EEECCCC
Confidence            9998874

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=95.44  E-value=0.11  Score=46.35  Aligned_cols=80  Identities=16%  Similarity=0.243  Sum_probs=51.5

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcc-eEE--cCCCCCCccHHHHHHHhhC-
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFI--NPATCGDKTVSQVIKEMTD-  252 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~-~v~--~~~~~~~~~~~~~i~~~~~-  252 (371)
                      -+++++||+|+ |++|...+..+...|+ +|+.+++++++.+.+.    +.+.. ..+  |-.+  ..++.+.+.+... 
T Consensus         9 ~~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~   85 (256)
T PRK06124          9 LAGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIAD--EEAVAAAFARIDAE   85 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHh
Confidence            35889999998 9999998888888899 8999998876654432    23421 122  2222  1223333333222 


Q ss_pred             -CCcCEEEECCCC
Q 017457          253 -GGADYCFECIGL  264 (371)
Q Consensus       253 -gg~d~vid~~g~  264 (371)
                       +.+|.++.+.|.
T Consensus        86 ~~~id~vi~~ag~   98 (256)
T PRK06124         86 HGRLDILVNNVGA   98 (256)
T ss_pred             cCCCCEEEECCCC
Confidence             368999988774

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=95.41  E-value=0.13  Score=41.20  Aligned_cols=97  Identities=23%  Similarity=0.224  Sum_probs=57.0

Q ss_pred             CCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh-------------------hHHH----HHHHhCc-ceEEcCCCCC
Q 017457          184 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP-------------------EKFE----IGKKFGI-TDFINPATCG  239 (371)
Q Consensus       184 g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~-------------------~~~~----~~~~lga-~~v~~~~~~~  239 (371)
                      ..+|+|.|+|++|...+..+-..|.++++.++...                   .|.+    .++++.. .++.....  
T Consensus         2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~--   79 (135)
T PF00899_consen    2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPE--   79 (135)
T ss_dssp             T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEES--
T ss_pred             CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeec--
Confidence            46899999999999999998888998899987521                   1222    2233322 12221111  


Q ss_pred             CccH-HHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCc-eEEEEC
Q 017457          240 DKTV-SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWG-KTVILG  286 (371)
Q Consensus       240 ~~~~-~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G-~~v~~g  286 (371)
                        .+ .+...++. .++|+||+|+.+......+.+..... + .++..+
T Consensus        80 --~~~~~~~~~~~-~~~d~vi~~~d~~~~~~~l~~~~~~~-~~p~i~~~  124 (135)
T PF00899_consen   80 --KIDEENIEELL-KDYDIVIDCVDSLAARLLLNEICREY-GIPFIDAG  124 (135)
T ss_dssp             --HCSHHHHHHHH-HTSSEEEEESSSHHHHHHHHHHHHHT-T-EEEEEE
T ss_pred             --ccccccccccc-cCCCEEEEecCCHHHHHHHHHHHHHc-CCCEEEEE
Confidence              11 12233333 27899999999877444555555554 5 444444

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK07074 short chain dehydrogenase; Provisional

Probab=95.41  E-value=0.11  Score=46.43  Aligned_cols=78  Identities=15%  Similarity=0.216  Sum_probs=49.6

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCc--ceE--EcCCCCCCccHHHHHHHhhC--CCc
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGI--TDF--INPATCGDKTVSQVIKEMTD--GGA  255 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga--~~v--~~~~~~~~~~~~~~i~~~~~--gg~  255 (371)
                      ++++||+|+ |++|...+..+...|+ +|++++++.++.+.+.+ +..  -++  .|-.+  .+...+.+.+...  +++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~~   78 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTD--AASLAAALANAAAERGPV   78 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCC
Confidence            568999998 9999998888878899 89999988877655433 221  112  22222  1222222322221  268


Q ss_pred             CEEEECCCC
Q 017457          256 DYCFECIGL  264 (371)
Q Consensus       256 d~vid~~g~  264 (371)
                      |+++.+.|.
T Consensus        79 d~vi~~ag~   87 (257)
T PRK07074         79 DVLVANAGA   87 (257)
T ss_pred             CEEEECCCC
Confidence            999998874

>PRK08219 short chain dehydrogenase; Provisional

Probab=95.41  E-value=0.21  Score=43.48  Aligned_cols=75  Identities=13%  Similarity=0.090  Sum_probs=47.9

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcceEEcCCCCCCccHHHHHHHhhCC--CcCEEE
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDG--GADYCF  259 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~g--g~d~vi  259 (371)
                      .+++||+|+ |.+|...+..+... . +|++++++.++.+.+.+ ....+++..+-   .+ .+.+.+....  +.|.+|
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~---~~-~~~~~~~~~~~~~id~vi   76 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDL---TD-PEAIAAAVEQLGRLDVLV   76 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCC---CC-HHHHHHHHHhcCCCCEEE
Confidence            368999998 99999888777666 6 89999998877655543 21122332222   22 2233333332  699999


Q ss_pred             ECCCC
Q 017457          260 ECIGL  264 (371)
Q Consensus       260 d~~g~  264 (371)
                      .+.|.
T Consensus        77 ~~ag~   81 (227)
T PRK08219         77 HNAGV   81 (227)
T ss_pred             ECCCc
Confidence            98874

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.41  E-value=0.096  Score=47.24  Aligned_cols=81  Identities=20%  Similarity=0.209  Sum_probs=52.0

Q ss_pred             CCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH----HHHHHHhC-c-ceEEcCCCCCCccHHHHHHHhhCC
Q 017457          181 VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK----FEIGKKFG-I-TDFINPATCGDKTVSQVIKEMTDG  253 (371)
Q Consensus       181 ~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~----~~~~~~lg-a-~~v~~~~~~~~~~~~~~i~~~~~g  253 (371)
                      --+|+.|||+|+ +++|.+.++-...+|+ +++..+.+.+.    .+.+++.| + .++.|-.+  .++..+...+....
T Consensus        35 ~v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~--~eei~~~a~~Vk~e  111 (300)
T KOG1201|consen   35 SVSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISD--REEIYRLAKKVKKE  111 (300)
T ss_pred             hccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCC--HHHHHHHHHHHHHh
Confidence            346899999987 8999987777777888 88888876653    33444445 2 23444322  13333333333322


Q ss_pred             --CcCEEEECCCC
Q 017457          254 --GADYCFECIGL  264 (371)
Q Consensus       254 --g~d~vid~~g~  264 (371)
                        .+|+++|..|-
T Consensus       112 ~G~V~ILVNNAGI  124 (300)
T KOG1201|consen  112 VGDVDILVNNAGI  124 (300)
T ss_pred             cCCceEEEecccc
Confidence              78999998884

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=95.38  E-value=0.11  Score=46.31  Aligned_cols=79  Identities=18%  Similarity=0.161  Sum_probs=50.5

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcc-eE--EcCCCCCCccHHHHHHHhhC--
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DF--INPATCGDKTVSQVIKEMTD--  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~-~v--~~~~~~~~~~~~~~i~~~~~--  252 (371)
                      .++++||+|+ +++|...+..+...|+ +|+.++++.++.+.+.    +.+.+ ++  .|..+  ..+..+.+.....  
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~   86 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS--EQELSALADFALSKL   86 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence            4789999998 9999999988888999 8888888776654432    22322 22  23222  1222222332222  


Q ss_pred             CCcCEEEECCCC
Q 017457          253 GGADYCFECIGL  264 (371)
Q Consensus       253 gg~d~vid~~g~  264 (371)
                      +++|+++++.+.
T Consensus        87 ~~~d~li~~ag~   98 (255)
T PRK06113         87 GKVDILVNNAGG   98 (255)
T ss_pred             CCCCEEEECCCC
Confidence            378999998773

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.37  E-value=0.36  Score=42.76  Aligned_cols=102  Identities=21%  Similarity=0.210  Sum_probs=59.3

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHH----HHHHhCcc-eEE--cCCCCCCccHHHHHHHhhC-
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFE----IGKKFGIT-DFI--NPATCGDKTVSQVIKEMTD-  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~-~~~~~~----~~~~lga~-~v~--~~~~~~~~~~~~~i~~~~~-  252 (371)
                      .++++||+|+ |.+|...+.-+...|+ +|+.+.+ +.++..    .+++.+.. ..+  |..+  ..+....+.++.. 
T Consensus         5 ~~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   81 (252)
T PRK06077          5 KDKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVST--REGCETLAKATIDR   81 (252)
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCC--HHHHHHHHHHHHHH
Confidence            3689999998 9999998888888999 7766553 322222    22333332 222  2222  1222222333222 


Q ss_pred             -CCcCEEEECCCC----------h---------------HHHHHHHHHhhcCCceEEEECcc
Q 017457          253 -GGADYCFECIGL----------T---------------SVMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       253 -gg~d~vid~~g~----------~---------------~~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                       +++|++|.+.|.          .               ...+.+.+.++.. |+++.++..
T Consensus        82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~sS~  142 (252)
T PRK06077         82 YGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG-GAIVNIASV  142 (252)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC-cEEEEEcch
Confidence             378999998873          0               0133445566676 899988863

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=95.37  E-value=0.55  Score=34.85  Aligned_cols=85  Identities=19%  Similarity=0.297  Sum_probs=55.3

Q ss_pred             eEEEEcCChHHHHHHHHHHHcC---CCeEEEE-cCChhHHHHHH-HhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          186 TVAIFGLGAVGLAVAEGARLNR---ASKIIGV-DINPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g---~~~Vi~~-~~~~~~~~~~~-~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      +|.|+|+|.+|.+.+.-....|   . +|+.+ .+++++.+.+. +++.....       .+..+.++     ..|+||-
T Consensus         1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~~~-------~~~~~~~~-----~advvil   67 (96)
T PF03807_consen    1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQATA-------DDNEEAAQ-----EADVVIL   67 (96)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEEES-------EEHHHHHH-----HTSEEEE
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhcccccc-------CChHHhhc-----cCCEEEE
Confidence            4778899999999998888888   6 78844 89999888764 45543221       12333333     4799999


Q ss_pred             CCCChHHHHHHHHHh---hcCCceEEEE
Q 017457          261 CIGLTSVMNDAFNSS---REGWGKTVIL  285 (371)
Q Consensus       261 ~~g~~~~~~~~~~~l---~~~~G~~v~~  285 (371)
                      |+.... +...++.+   .++ ..++.+
T Consensus        68 av~p~~-~~~v~~~i~~~~~~-~~vis~   93 (96)
T PF03807_consen   68 AVKPQQ-LPEVLSEIPHLLKG-KLVISI   93 (96)
T ss_dssp             -S-GGG-HHHHHHHHHHHHTT-SEEEEE
T ss_pred             EECHHH-HHHHHHHHhhccCC-CEEEEe
Confidence            998766 55555444   343 455554

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PLN03139 formate dehydrogenase; Provisional

Probab=95.36  E-value=0.13  Score=48.86  Aligned_cols=89  Identities=17%  Similarity=0.146  Sum_probs=57.1

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  262 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~  262 (371)
                      .|++|.|+|.|.+|...++.++..|. +|++.+++....+...+.|+..+        .++.+.+.     ..|+|+.+.
T Consensus       198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~~~~--------~~l~ell~-----~sDvV~l~l  263 (386)
T PLN03139        198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGAKFE--------EDLDAMLP-----KCDVVVINT  263 (386)
T ss_pred             CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCceec--------CCHHHHHh-----hCCEEEEeC
Confidence            67899999999999999999999999 89999877544444444453211        12222221     367777665


Q ss_pred             CChHHH-----HHHHHHhhcCCceEEEEC
Q 017457          263 GLTSVM-----NDAFNSSREGWGKTVILG  286 (371)
Q Consensus       263 g~~~~~-----~~~~~~l~~~~G~~v~~g  286 (371)
                      +.....     ...+..|+++ ..+|.++
T Consensus       264 Plt~~T~~li~~~~l~~mk~g-a~lIN~a  291 (386)
T PLN03139        264 PLTEKTRGMFNKERIAKMKKG-VLIVNNA  291 (386)
T ss_pred             CCCHHHHHHhCHHHHhhCCCC-eEEEECC
Confidence            532211     2455666665 6666665

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=95.35  E-value=0.17  Score=47.41  Aligned_cols=36  Identities=31%  Similarity=0.251  Sum_probs=31.4

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      .+.+|+|+|+|++|..++..+-..|..++++++.+.
T Consensus        23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~   58 (338)
T PRK12475         23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY   58 (338)
T ss_pred             cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            346799999999999999999999998899898753

>PRK06398 aldose dehydrogenase; Validated

Probab=95.35  E-value=0.055  Score=48.52  Aligned_cols=74  Identities=16%  Similarity=0.266  Sum_probs=47.5

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcce-EEcCCCCCCccHHHHHHHhhC--CCcCEE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD-FINPATCGDKTVSQVIKEMTD--GGADYC  258 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~-v~~~~~~~~~~~~~~i~~~~~--gg~d~v  258 (371)
                      +|+++||+|+ +++|.+.+..+...|+ +|+++++++++..     .... ..|-.+  ..+..+.+.+...  +.+|++
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~~~--~~~i~~~~~~~~~~~~~id~l   76 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDVSN--KEQVIKGIDYVISKYGRIDIL   76 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence            4789999998 9999999999989999 8999887764422     1111 123222  1223333333222  368999


Q ss_pred             EECCCC
Q 017457          259 FECIGL  264 (371)
Q Consensus       259 id~~g~  264 (371)
                      +++.|.
T Consensus        77 i~~Ag~   82 (258)
T PRK06398         77 VNNAGI   82 (258)
T ss_pred             EECCCC
Confidence            998763

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.34  E-value=0.12  Score=45.56  Aligned_cols=81  Identities=17%  Similarity=0.268  Sum_probs=50.4

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HHhCcc-eEEcCCCCCCccHHHHHHHhhC--CC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--GG  254 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~-~v~~~~~~~~~~~~~~i~~~~~--gg  254 (371)
                      .+++++|+|+ |++|...+..+...|+ +|+++++++++.+.+    +..+.. .++..+-.+..+..+.+++...  ++
T Consensus         6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (239)
T PRK07666          6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS   84 (239)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999998 9999999988888999 899999887765443    222322 1222221011223333333221  37


Q ss_pred             cCEEEECCCC
Q 017457          255 ADYCFECIGL  264 (371)
Q Consensus       255 ~d~vid~~g~  264 (371)
                      +|++|++.|.
T Consensus        85 id~vi~~ag~   94 (239)
T PRK07666         85 IDILINNAGI   94 (239)
T ss_pred             ccEEEEcCcc
Confidence            8999998764

>PRK06484 short chain dehydrogenase; Validated

Probab=95.33  E-value=0.088  Score=52.45  Aligned_cols=79  Identities=15%  Similarity=0.257  Sum_probs=53.7

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCcce---EEcCCCCCCccHHHHHHHhhC--CCc
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITD---FINPATCGDKTVSQVIKEMTD--GGA  255 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~~---v~~~~~~~~~~~~~~i~~~~~--gg~  255 (371)
                      +++++||+|+ +++|.+.++.+...|+ +|+.++++.++.+.+ ++++...   ..|-.+  .++..+.+.+...  +++
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i   80 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSD--EAQIREGFEQLHREFGRI   80 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCC--HHHHHHHHHHHHHHhCCC
Confidence            5789999998 9999999999989999 999999888876654 3455432   223222  1233333333322  379


Q ss_pred             CEEEECCCC
Q 017457          256 DYCFECIGL  264 (371)
Q Consensus       256 d~vid~~g~  264 (371)
                      |+++++.|.
T Consensus        81 D~li~nag~   89 (520)
T PRK06484         81 DVLVNNAGV   89 (520)
T ss_pred             CEEEECCCc
Confidence            999998764

>PRK05884 short chain dehydrogenase; Provisional

Probab=95.32  E-value=0.12  Score=45.26  Aligned_cols=74  Identities=16%  Similarity=0.220  Sum_probs=48.3

Q ss_pred             eEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCcceE-EcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457          186 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDF-INPATCGDKTVSQVIKEMTDGGADYCFECI  262 (371)
Q Consensus       186 ~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~~v-~~~~~~~~~~~~~~i~~~~~gg~d~vid~~  262 (371)
                      +++|+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ ++++...+ .|-.+  ..+..+.+.+. .+.+|+++++.
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~-~~~id~lv~~a   77 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTD--PASLEEARGLF-PHHLDTIVNVP   77 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCC--HHHHHHHHHHH-hhcCcEEEECC
Confidence            5899988 9999999998888899 899999888776654 33444322 23222  12222222222 23689999875


Q ss_pred             C
Q 017457          263 G  263 (371)
Q Consensus       263 g  263 (371)
                      |
T Consensus        78 g   78 (223)
T PRK05884         78 A   78 (223)
T ss_pred             C
Confidence            4

>TIGR00477 tehB tellurite resistance protein TehB

Probab=95.28  E-value=0.13  Score=44.20  Aligned_cols=99  Identities=12%  Similarity=0.193  Sum_probs=59.5

Q ss_pred             HHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh----CcceEEcCCCCCCccHHHHHHHhh
Q 017457          176 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GITDFINPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       176 ~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l----ga~~v~~~~~~~~~~~~~~i~~~~  251 (371)
                      .......++.+||-+|+|. |..+..+++ .|. +|++++.+++..+.+++.    +..  +....   .+...  ..+ 
T Consensus        23 ~~~~~~~~~~~vLDiGcG~-G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~---~d~~~--~~~-   91 (195)
T TIGR00477        23 REAVKTVAPCKTLDLGCGQ-GRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLP--LRTDA---YDINA--AAL-   91 (195)
T ss_pred             HHHhccCCCCcEEEeCCCC-CHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCC--ceeEe---ccchh--ccc-
Confidence            3344455667899998865 666767776 477 999999998877765442    322  11111   11110  011 


Q ss_pred             CCCcCEEEECCC-----C---hHHHHHHHHHhhcCCceEEEEC
Q 017457          252 DGGADYCFECIG-----L---TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       252 ~gg~d~vid~~g-----~---~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      .+.+|+|+.+..     .   ...++.+.+.|+++ |.++.+.
T Consensus        92 ~~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lli~~  133 (195)
T TIGR00477        92 NEDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPG-GYNLIVA  133 (195)
T ss_pred             cCCCCEEEEecccccCCHHHHHHHHHHHHHHhCCC-cEEEEEE
Confidence            237999975421     1   23477888899998 9855543

Part of a tellurite-reducing operon tehA and tehB

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=95.28  E-value=0.27  Score=39.77  Aligned_cols=32  Identities=28%  Similarity=0.434  Sum_probs=28.6

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  217 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~  217 (371)
                      +|+|+|+|++|...+..+...|.++++.++..
T Consensus         1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            48999999999999999999999889998754

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.27  E-value=0.12  Score=46.21  Aligned_cols=79  Identities=18%  Similarity=0.181  Sum_probs=48.7

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHHHHHHhCcceE-EcCCCCCCccHHHHHHHhhC--CCcCE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMTD--GGADY  257 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~-~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~--gg~d~  257 (371)
                      .++++||+|+ |++|.+.++.+...|+ +|+++.+ +++..+.+++.+...+ .|-.+  .++..+.+.+...  +++|+
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~id~   82 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGN--RDQVKKSKEVVEKEFGRVDV   82 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCC--HHHHHHHHHHHHHHcCCCCE
Confidence            4689999998 9999999988888899 7777654 3344444444343222 23222  1223333333222  37899


Q ss_pred             EEECCCC
Q 017457          258 CFECIGL  264 (371)
Q Consensus       258 vid~~g~  264 (371)
                      ++++.|.
T Consensus        83 li~~ag~   89 (255)
T PRK06463         83 LVNNAGI   89 (255)
T ss_pred             EEECCCc
Confidence            9998864

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=95.27  E-value=0.17  Score=44.08  Aligned_cols=102  Identities=16%  Similarity=0.181  Sum_probs=62.0

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCcceEE------cC-CCCCCccHHHHHHHhh--
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDFI------NP-ATCGDKTVSQVIKEMT--  251 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~~v~------~~-~~~~~~~~~~~i~~~~--  251 (371)
                      .++.+||+.|+|. |.-++.+|. .|. .|++++.++...+.+ .+.+.....      .. ......-....+.++.  
T Consensus        33 ~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~  109 (213)
T TIGR03840        33 PAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAA  109 (213)
T ss_pred             CCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCcc
Confidence            5778999999876 777777775 799 999999999988874 223321000      00 0000000000111111  


Q ss_pred             -CCCcCEEEECCCC--------hHHHHHHHHHhhcCCceEEEECc
Q 017457          252 -DGGADYCFECIGL--------TSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       252 -~gg~d~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                       .+.+|.++|+..-        ...++.+.+.|+++ |+++..+.
T Consensus       110 ~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg-G~~ll~~~  153 (213)
T TIGR03840       110 DLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG-ARQLLITL  153 (213)
T ss_pred             cCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC-CeEEEEEE
Confidence             1268999996531        23478899999998 98666654

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=95.26  E-value=0.19  Score=43.98  Aligned_cols=97  Identities=18%  Similarity=0.208  Sum_probs=64.4

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcce--EEcCCCCCCccHHHHHHHhhCCCcCEEE
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD--FINPATCGDKTVSQVIKEMTDGGADYCF  259 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~--v~~~~~~~~~~~~~~i~~~~~gg~d~vi  259 (371)
                      -+|.+||=+|+|+ |+++..+|+ +|+ +|++++-+++..+.++.-....  -+++..    ...+.+... ++.||+|+
T Consensus        58 l~g~~vLDvGCGg-G~Lse~mAr-~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~----~~~edl~~~-~~~FDvV~  129 (243)
T COG2227          58 LPGLRVLDVGCGG-GILSEPLAR-LGA-SVTGIDASEKPIEVAKLHALESGVNIDYRQ----ATVEDLASA-GGQFDVVT  129 (243)
T ss_pred             CCCCeEEEecCCc-cHhhHHHHH-CCC-eeEEecCChHHHHHHHHhhhhccccccchh----hhHHHHHhc-CCCccEEE
Confidence            4789999999866 676666665 568 9999999999888876422111  144544    222222221 13899998


Q ss_pred             E-----CCCChH-HHHHHHHHhhcCCceEEEECc
Q 017457          260 E-----CIGLTS-VMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       260 d-----~~g~~~-~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      +     .+.++. .+..+.+.++|+ |.++....
T Consensus       130 cmEVlEHv~dp~~~~~~c~~lvkP~-G~lf~STi  162 (243)
T COG2227         130 CMEVLEHVPDPESFLRACAKLVKPG-GILFLSTI  162 (243)
T ss_pred             EhhHHHccCCHHHHHHHHHHHcCCC-cEEEEecc
Confidence            5     455544 367899999997 88776543

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=95.25  E-value=0.14  Score=45.39  Aligned_cols=84  Identities=19%  Similarity=0.204  Sum_probs=52.2

Q ss_pred             CCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HHhCcc--eEE--cCCCCCCccHHHHHHHh
Q 017457          180 GVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT--DFI--NPATCGDKTVSQVIKEM  250 (371)
Q Consensus       180 ~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~--~v~--~~~~~~~~~~~~~i~~~  250 (371)
                      ...+++++||+|+ |++|...++.+...|+ +|++++++.++.+.+    ++.+..  .++  |....+..++.+.+..+
T Consensus         8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~   86 (247)
T PRK08945          8 DLLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTI   86 (247)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence            3567899999998 9999998888888899 899999887664433    223321  122  22110112233333332


Q ss_pred             hC--CCcCEEEECCCC
Q 017457          251 TD--GGADYCFECIGL  264 (371)
Q Consensus       251 ~~--gg~d~vid~~g~  264 (371)
                      ..  +.+|.++.+.+.
T Consensus        87 ~~~~~~id~vi~~Ag~  102 (247)
T PRK08945         87 EEQFGRLDGVLHNAGL  102 (247)
T ss_pred             HHHhCCCCEEEECCcc
Confidence            22  268999987763

>PRK07340 ornithine cyclodeaminase; Validated

Probab=95.24  E-value=0.13  Score=47.50  Aligned_cols=103  Identities=11%  Similarity=-0.005  Sum_probs=67.8

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHH-HcCCCeEEEEcCChhHHHHH-HHhCcc--eEEcCCCCCCccHHHHHHHhhCCCcCE
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGAR-LNRASKIIGVDINPEKFEIG-KKFGIT--DFINPATCGDKTVSQVIKEMTDGGADY  257 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~-~~g~~~Vi~~~~~~~~~~~~-~~lga~--~v~~~~~~~~~~~~~~i~~~~~gg~d~  257 (371)
                      ...++++|+|+|..|.+.+..+. ..+.++|.+..++.++.+.+ .++...  .+. .     .+..+.+.     ++|+
T Consensus       123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~-----~~~~~av~-----~aDi  191 (304)
T PRK07340        123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P-----LDGEAIPE-----AVDL  191 (304)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E-----CCHHHHhh-----cCCE
Confidence            45679999999999999888876 46877899999998876654 334321  111 1     12333332     7999


Q ss_pred             EEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHH
Q 017457          258 CFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI  299 (371)
Q Consensus       258 vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~  299 (371)
                      |+.|+++..-+-..+  ++++ -++..+|.... ...+++..
T Consensus       192 VitaT~s~~Pl~~~~--~~~g-~hi~~iGs~~p-~~~El~~~  229 (304)
T PRK07340        192 VVTATTSRTPVYPEA--ARAG-RLVVAVGAFTP-DMAELAPR  229 (304)
T ss_pred             EEEccCCCCceeCcc--CCCC-CEEEecCCCCC-CcccCCHH
Confidence            999988655222233  6786 78888887433 34455544

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=95.23  E-value=0.22  Score=43.92  Aligned_cols=98  Identities=17%  Similarity=0.193  Sum_probs=58.9

Q ss_pred             CCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-------------------H----HHHHHHhCcc-eEEcCCCCC
Q 017457          184 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE-------------------K----FEIGKKFGIT-DFINPATCG  239 (371)
Q Consensus       184 g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~-------------------~----~~~~~~lga~-~v~~~~~~~  239 (371)
                      ..+|+|+|.|++|..++..+-..|..+++.++...-                   |    .++++++..+ .+.....  
T Consensus        11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~--   88 (231)
T cd00755          11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEE--   88 (231)
T ss_pred             CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeee--
Confidence            467999999999999999999999999999985321                   1    1122233322 1211111  


Q ss_pred             CccH-HHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCc-eEEEEC
Q 017457          240 DKTV-SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWG-KTVILG  286 (371)
Q Consensus       240 ~~~~-~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G-~~v~~g  286 (371)
                        .+ .+...++....+|+|+||+.+......+.+..... + .++..+
T Consensus        89 --~i~~~~~~~l~~~~~D~VvdaiD~~~~k~~L~~~c~~~-~ip~I~s~  134 (231)
T cd00755          89 --FLTPDNSEDLLGGDPDFVVDAIDSIRAKVALIAYCRKR-KIPVISSM  134 (231)
T ss_pred             --ecCHhHHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHh-CCCEEEEe
Confidence              11 12233343347999999999877444444544444 4 455444

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=95.23  E-value=0.17  Score=47.34  Aligned_cols=35  Identities=34%  Similarity=0.300  Sum_probs=31.1

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  217 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~  217 (371)
                      ...+|+|+|+|++|..++..+...|..+++.++.+
T Consensus        23 ~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D   57 (339)
T PRK07688         23 REKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD   57 (339)
T ss_pred             cCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            34679999999999999999999999999999875

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=95.22  E-value=0.13  Score=45.77  Aligned_cols=76  Identities=14%  Similarity=0.210  Sum_probs=50.3

Q ss_pred             eEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcce-EE--cCCCCCCccHHHHHHHhhC--CCcCEE
Q 017457          186 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITD-FI--NPATCGDKTVSQVIKEMTD--GGADYC  258 (371)
Q Consensus       186 ~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~-v~--~~~~~~~~~~~~~i~~~~~--gg~d~v  258 (371)
                      +++|+|+ |++|.+.+..+...|+ +|+++++++++.+.+.. ++.+. .+  |-.+  ..++.+.+.+...  +++|++
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~~~id~v   78 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRN--RAAIEEMLASLPAEWRNIDVL   78 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence            6899998 9999999999888999 89999998887766543 34321 22  2222  1223333333222  378999


Q ss_pred             EECCCC
Q 017457          259 FECIGL  264 (371)
Q Consensus       259 id~~g~  264 (371)
                      +.+.|.
T Consensus        79 i~~ag~   84 (248)
T PRK10538         79 VNNAGL   84 (248)
T ss_pred             EECCCc
Confidence            988763

>PRK08317 hypothetical protein; Provisional

Probab=95.21  E-value=0.24  Score=43.44  Aligned_cols=102  Identities=22%  Similarity=0.344  Sum_probs=67.9

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHHh----Cc-ceEEcCCCCCCccHHHHHH
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKKF----GI-TDFINPATCGDKTVSQVIK  248 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~l----ga-~~v~~~~~~~~~~~~~~i~  248 (371)
                      +.+...+.++++||-+|+|. |..+..+++..+ ..++++++.+++..+.+++.    +. ..+...+.   ..+     
T Consensus        11 ~~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~---~~~-----   81 (241)
T PRK08317         11 TFELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDA---DGL-----   81 (241)
T ss_pred             HHHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEeccc---ccC-----
Confidence            34556788999999999976 888888888763 23899999999888877664    11 11221111   111     


Q ss_pred             HhhCCCcCEEEECC-----CC-hHHHHHHHHHhhcCCceEEEEC
Q 017457          249 EMTDGGADYCFECI-----GL-TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       249 ~~~~gg~d~vid~~-----g~-~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      .+..+.+|+|+...     .+ ...+..+.+.|+++ |.++...
T Consensus        82 ~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~  124 (241)
T PRK08317         82 PFPDGSFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLD  124 (241)
T ss_pred             CCCCCCceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEe
Confidence            12233789887431     22 23578999999998 9988765

>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=95.21  E-value=0.1  Score=53.58  Aligned_cols=76  Identities=29%  Similarity=0.328  Sum_probs=52.0

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh---------------------HHHHHHHhCcceEEcCCCCCCc
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE---------------------KFEIGKKFGITDFINPATCGDK  241 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~---------------------~~~~~~~lga~~v~~~~~~~~~  241 (371)
                      .+++|+|+|+|+.|++++..+...|+ +|+++++.+.                     ..+.++++|++...+..-..+-
T Consensus       326 ~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~i  404 (654)
T PRK12769        326 SDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKDI  404 (654)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCcC
Confidence            57899999999999999999999999 8999886532                     3455667787544432110001


Q ss_pred             cHHHHHHHhhCCCcCEEEECCCC
Q 017457          242 TVSQVIKEMTDGGADYCFECIGL  264 (371)
Q Consensus       242 ~~~~~i~~~~~gg~d~vid~~g~  264 (371)
                      .. +   .+. .++|.||.++|.
T Consensus       405 ~~-~---~~~-~~~DavilAtGa  422 (654)
T PRK12769        405 SL-E---SLL-EDYDAVFVGVGT  422 (654)
T ss_pred             CH-H---HHH-hcCCEEEEeCCC
Confidence            11 1   111 269999988885

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=95.20  E-value=0.2  Score=43.63  Aligned_cols=35  Identities=23%  Similarity=0.301  Sum_probs=30.9

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  217 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~  217 (371)
                      +..+|+|+|+|++|...++.+...|..+++.++.+
T Consensus        27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            35679999999999999999999999889999865

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=95.20  E-value=0.24  Score=43.89  Aligned_cols=74  Identities=26%  Similarity=0.274  Sum_probs=46.9

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcc-eEE--cCCCCCCccHHHHHHHhhC--CCcC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-DFI--NPATCGDKTVSQVIKEMTD--GGAD  256 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~-~v~--~~~~~~~~~~~~~i~~~~~--gg~d  256 (371)
                      +++++||+|+ |.+|...+..+...|+ +|++++++.     ....+.. ..+  |-.+  .+.+.+.+.+...  +.+|
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id   78 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSD--AAAVAQVCQRLLAETGPLD   78 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCCC
Confidence            4689999998 9999999998888999 899998765     1222221 122  2221  1223333333222  2689


Q ss_pred             EEEECCCC
Q 017457          257 YCFECIGL  264 (371)
Q Consensus       257 ~vid~~g~  264 (371)
                      +++++.+.
T Consensus        79 ~vi~~ag~   86 (252)
T PRK08220         79 VLVNAAGI   86 (252)
T ss_pred             EEEECCCc
Confidence            99998774

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=95.20  E-value=0.13  Score=45.66  Aligned_cols=78  Identities=22%  Similarity=0.351  Sum_probs=49.7

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eEE--cCCCCCCccHHHHHHHhh--CC
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFI--NPATCGDKTVSQVIKEMT--DG  253 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~--~~~~~~~~~~~~~i~~~~--~g  253 (371)
                      ++++||+|+ |.+|...+..+...|+ +|++++++.++.+.+.+    .+.. ..+  |..+  .+++.+.+....  .+
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~   77 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTK--EDEIADMIAAAAAEFG   77 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHhcC
Confidence            468999998 9999999988888999 89999998876655543    2222 112  3222  122322222222  12


Q ss_pred             CcCEEEECCCC
Q 017457          254 GADYCFECIGL  264 (371)
Q Consensus       254 g~d~vid~~g~  264 (371)
                      +.|++|.+.+.
T Consensus        78 ~~d~vi~~a~~   88 (255)
T TIGR01963        78 GLDILVNNAGI   88 (255)
T ss_pred             CCCEEEECCCC
Confidence            68999987753

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK08328 hypothetical protein; Provisional

Probab=95.19  E-value=0.18  Score=44.58  Aligned_cols=34  Identities=26%  Similarity=0.345  Sum_probs=30.3

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI  216 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~  216 (371)
                      .+.+|+|+|+|++|...+..+...|.++++.++.
T Consensus        26 ~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~   59 (231)
T PRK08328         26 KKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDE   59 (231)
T ss_pred             hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence            3568999999999999999999999989998874

>PLN00203 glutamyl-tRNA reductase

Probab=95.18  E-value=0.15  Score=50.44  Aligned_cols=96  Identities=15%  Similarity=0.216  Sum_probs=62.2

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hC-cce-EEcCCCCCCccHHHHHHHhhCCCcCEEE
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FG-ITD-FINPATCGDKTVSQVIKEMTDGGADYCF  259 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lg-a~~-v~~~~~~~~~~~~~~i~~~~~gg~d~vi  259 (371)
                      .+.+|+|+|+|.+|.+++..+...|+.+|+++.++.++.+.+.+ ++ ... +...+     +.    .+.. ..+|+||
T Consensus       265 ~~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~-----dl----~~al-~~aDVVI  334 (519)
T PLN00203        265 ASARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLD-----EM----LACA-AEADVVF  334 (519)
T ss_pred             CCCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHh-----hH----HHHH-hcCCEEE
Confidence            37899999999999999999999998789999999888776544 43 221 11111     11    1211 2689999


Q ss_pred             ECCCChH--HHHHHHHHhhcC---Cc---eEEEECcc
Q 017457          260 ECIGLTS--VMNDAFNSSREG---WG---KTVILGVE  288 (371)
Q Consensus       260 d~~g~~~--~~~~~~~~l~~~---~G---~~v~~g~~  288 (371)
                      .|++.+.  .....++.+.+.   .+   .+++++.+
T Consensus       335 sAT~s~~pvI~~e~l~~~~~~~~~~~~~~~~IDLAvP  371 (519)
T PLN00203        335 TSTSSETPLFLKEHVEALPPASDTVGGKRLFVDISVP  371 (519)
T ss_pred             EccCCCCCeeCHHHHHHhhhcccccCCCeEEEEeCCC
Confidence            9987644  123444444321   02   47777763

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.17  E-value=0.23  Score=47.31  Aligned_cols=35  Identities=20%  Similarity=0.201  Sum_probs=31.8

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  217 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~  217 (371)
                      .+.+|+|+|+|++|..++..+...|.++++.++.+
T Consensus       134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            56789999999999999999999999899999876

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.14  E-value=0.51  Score=43.82  Aligned_cols=39  Identities=21%  Similarity=0.197  Sum_probs=33.4

Q ss_pred             CeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 017457          185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG  224 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~  224 (371)
                      ++|.|+|+|.+|...++.+...|. .|++.+.+++..+.+
T Consensus         8 ~~VaVIGaG~MG~giA~~~a~aG~-~V~l~D~~~~~~~~~   46 (321)
T PRK07066          8 KTFAAIGSGVIGSGWVARALAHGL-DVVAWDPAPGAEAAL   46 (321)
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHH
Confidence            579999999999988888888899 999999988765543

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.13  E-value=0.18  Score=44.85  Aligned_cols=34  Identities=26%  Similarity=0.386  Sum_probs=30.3

Q ss_pred             CCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457          184 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  217 (371)
Q Consensus       184 g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~  217 (371)
                      +.+|+|+|+|++|..+++.+...|..+++.++.+
T Consensus        24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D   57 (240)
T TIGR02355        24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFD   57 (240)
T ss_pred             CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            4789999999999999999999999899988753

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=95.13  E-value=0.15  Score=45.57  Aligned_cols=100  Identities=12%  Similarity=0.091  Sum_probs=60.7

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh--CcceE-EcCCCCCCccHHHHHHHhhCCCcCE
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF--GITDF-INPATCGDKTVSQVIKEMTDGGADY  257 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l--ga~~v-~~~~~~~~~~~~~~i~~~~~gg~d~  257 (371)
                      ..+++|||+|+ |.+|...+..+...|+ +|+++.++.++.......  ++..+ .|..+   .  .+.+.+....++|+
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d---~--~~~l~~~~~~~~d~   88 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVTE---G--SDKLVEAIGDDSDA   88 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCCC---C--HHHHHHHhhcCCCE
Confidence            34679999998 9999999988888898 899888887765433221  22222 22221   1  12233322227999


Q ss_pred             EEECCCChH-------------HHHHHHHHhhcC-CceEEEECc
Q 017457          258 CFECIGLTS-------------VMNDAFNSSREG-WGKTVILGV  287 (371)
Q Consensus       258 vid~~g~~~-------------~~~~~~~~l~~~-~G~~v~~g~  287 (371)
                      ||.+.|...             ....+++.+... .++++.++.
T Consensus        89 vi~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS  132 (251)
T PLN00141         89 VICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSS  132 (251)
T ss_pred             EEECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEcc
Confidence            998876421             134455555543 157888775

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=95.13  E-value=0.16  Score=45.65  Aligned_cols=81  Identities=23%  Similarity=0.303  Sum_probs=50.3

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcc-eEEcCCCCCCccHHHHHHHhhC--CC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GG  254 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~-~v~~~~~~~~~~~~~~i~~~~~--gg  254 (371)
                      .++++||+|+ +++|.+.+..+...|+ +|+++++++++.+.+.    +.|.+ ..+..+-.+.....+.+.+...  +.
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   87 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGV   87 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            5789999998 9999998888888899 8988888877655432    23432 1222111011222222222221  36


Q ss_pred             cCEEEECCCC
Q 017457          255 ADYCFECIGL  264 (371)
Q Consensus       255 ~d~vid~~g~  264 (371)
                      +|+++++.|.
T Consensus        88 id~li~~ag~   97 (265)
T PRK07097         88 IDILVNNAGI   97 (265)
T ss_pred             CCEEEECCCC
Confidence            8999998874

>PRK07102 short chain dehydrogenase; Provisional

Probab=95.13  E-value=0.19  Score=44.37  Aligned_cols=39  Identities=18%  Similarity=0.161  Sum_probs=33.3

Q ss_pred             CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 017457          185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG  224 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~  224 (371)
                      ++++|+|+ |++|...+..+...|+ +|+++++++++.+.+
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~   41 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLERL   41 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHH
Confidence            57999998 9999999998888899 899999988766543

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.13  E-value=0.13  Score=46.22  Aligned_cols=78  Identities=14%  Similarity=0.254  Sum_probs=47.3

Q ss_pred             CCCeEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCCh---hHHHHHH-Hh-Ccc-eE--EcCCCCCCccHHHHHHHhh
Q 017457          183 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINP---EKFEIGK-KF-GIT-DF--INPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       183 ~g~~VLI~G~---g~~G~~ai~la~~~g~~~Vi~~~~~~---~~~~~~~-~l-ga~-~v--~~~~~~~~~~~~~~i~~~~  251 (371)
                      .++++||+|+   +++|.+.++.....|+ +|+.+.++.   ++.+.+. ++ +.. ..  .|-.+  .++..+.+.+..
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~   82 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTS--DEEITACFETIK   82 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCC--HHHHHHHHHHHH
Confidence            4789999986   5999998888888999 888886543   3333332 23 211 12  23222  123333333332


Q ss_pred             C--CCcCEEEECCC
Q 017457          252 D--GGADYCFECIG  263 (371)
Q Consensus       252 ~--gg~d~vid~~g  263 (371)
                      .  +.+|+++++.|
T Consensus        83 ~~~g~ld~lv~nag   96 (257)
T PRK08594         83 EEVGVIHGVAHCIA   96 (257)
T ss_pred             HhCCCccEEEECcc
Confidence            2  37999998876

>PRK06849 hypothetical protein; Provisional

Probab=95.12  E-value=0.68  Score=44.31  Aligned_cols=94  Identities=13%  Similarity=0.024  Sum_probs=59.8

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcce--EEcCCCCCCccHHHHHHHhhCC-CcCEE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD--FINPATCGDKTVSQVIKEMTDG-GADYC  258 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~--v~~~~~~~~~~~~~~i~~~~~g-g~d~v  258 (371)
                      ..++|||+|+ .+.|+..+..++..|. +|++++.++.......+ .++.  .+..-..+.+.+.+.+.++... ++|++
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~~~~~~s~-~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v   80 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLKYPLSRFSR-AVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL   80 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHH-hhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence            4689999998 6789999999999999 99999987654432221 2222  2322221224567777777666 89999


Q ss_pred             EECCCChHHHHHHHHHhhcC
Q 017457          259 FECIGLTSVMNDAFNSSREG  278 (371)
Q Consensus       259 id~~g~~~~~~~~~~~l~~~  278 (371)
                      +-+...........+.+.+.
T Consensus        81 IP~~e~~~~~a~~~~~l~~~  100 (389)
T PRK06849         81 IPTCEEVFYLSHAKEELSAY  100 (389)
T ss_pred             EECChHHHhHHhhhhhhcCC
Confidence            97765433233334445543

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=95.12  E-value=0.23  Score=43.70  Aligned_cols=81  Identities=21%  Similarity=0.253  Sum_probs=58.0

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH--hCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCC
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK--FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG  263 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~--lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g  263 (371)
                      .++|.|+|.+|...++.+...|. .|++++.++++.+...+  ++. +++..+.    .-.+.++++--..+|+++-+++
T Consensus         2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~-~~v~gd~----t~~~~L~~agi~~aD~vva~t~   75 (225)
T COG0569           2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDT-HVVIGDA----TDEDVLEEAGIDDADAVVAATG   75 (225)
T ss_pred             EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcce-EEEEecC----CCHHHHHhcCCCcCCEEEEeeC
Confidence            68899999999999999999999 89999999999887433  444 3443333    2234555553338999999888


Q ss_pred             ChHHHHHHHH
Q 017457          264 LTSVMNDAFN  273 (371)
Q Consensus       264 ~~~~~~~~~~  273 (371)
                      ... .+..+-
T Consensus        76 ~d~-~N~i~~   84 (225)
T COG0569          76 NDE-VNSVLA   84 (225)
T ss_pred             CCH-HHHHHH
Confidence            755 343333

>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []

Probab=95.11  E-value=0.069  Score=47.49  Aligned_cols=108  Identities=18%  Similarity=0.220  Sum_probs=65.3

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHH-HHH
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQ-VIK  248 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~-~i~  248 (371)
                      +....++.||++|+=.|.|. |.++..++++.| -.+|+..+..+++.+.+++    .|....+.-..   .+..+ ...
T Consensus        32 I~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~---~Dv~~~g~~  107 (247)
T PF08704_consen   32 ILMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHH---RDVCEEGFD  107 (247)
T ss_dssp             HHHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEE---S-GGCG--S
T ss_pred             HHHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEe---cceeccccc
Confidence            34567899999999887765 677777887765 3489999999988877654    45432111111   11111 110


Q ss_pred             HhhCCCcCEEE-ECCCChHHHHHHHHHh-hcCCceEEEECc
Q 017457          249 EMTDGGADYCF-ECIGLTSVMNDAFNSS-REGWGKTVILGV  287 (371)
Q Consensus       249 ~~~~gg~d~vi-d~~g~~~~~~~~~~~l-~~~~G~~v~~g~  287 (371)
                      +-....+|.|| |--.--..+..+.+.| +++ |+++.|.-
T Consensus       108 ~~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~g-G~i~~fsP  147 (247)
T PF08704_consen  108 EELESDFDAVFLDLPDPWEAIPHAKRALKKPG-GRICCFSP  147 (247)
T ss_dssp             TT-TTSEEEEEEESSSGGGGHHHHHHHE-EEE-EEEEEEES
T ss_pred             ccccCcccEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECC
Confidence            00112689886 7655445689999999 887 99999863

; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.11  E-value=0.14  Score=46.07  Aligned_cols=80  Identities=16%  Similarity=0.288  Sum_probs=47.3

Q ss_pred             CCCeEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCC---hhHHHHH-HHhCcceEEcCCCCCCccHHHHHHHhhC--C
Q 017457          183 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDIN---PEKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTD--G  253 (371)
Q Consensus       183 ~g~~VLI~G~---g~~G~~ai~la~~~g~~~Vi~~~~~---~~~~~~~-~~lga~~v~~~~~~~~~~~~~~i~~~~~--g  253 (371)
                      +++++||+|+   +++|.+.++.+...|+ +|+.+.+.   .++.+.+ ++++....+..+-.+.++..+.+.....  +
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   83 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWD   83 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhC
Confidence            5789999984   5899998888888999 88887543   3333333 2344322222111112333333333322  3


Q ss_pred             CcCEEEECCC
Q 017457          254 GADYCFECIG  263 (371)
Q Consensus       254 g~d~vid~~g  263 (371)
                      .+|+++++.|
T Consensus        84 ~iD~lvnnAG   93 (260)
T PRK06997         84 GLDGLVHSIG   93 (260)
T ss_pred             CCcEEEEccc
Confidence            7999998876

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=95.11  E-value=0.21  Score=44.52  Aligned_cols=34  Identities=24%  Similarity=0.337  Sum_probs=30.3

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI  216 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~  216 (371)
                      ...+|+|+|+|++|..++..+...|..++++++.
T Consensus        31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~   64 (245)
T PRK05690         31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDF   64 (245)
T ss_pred             cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence            3578999999999999999999999989988875

>PRK07791 short chain dehydrogenase; Provisional

Probab=95.10  E-value=0.17  Score=46.14  Aligned_cols=36  Identities=28%  Similarity=0.313  Sum_probs=30.3

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      -+++++||+|+ +++|.+.++.+...|+ +|++++++.
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~   40 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGV   40 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCc
Confidence            46889999998 9999998888888999 888887553

>PRK08303 short chain dehydrogenase; Provisional

Probab=95.09  E-value=0.15  Score=47.18  Aligned_cols=34  Identities=15%  Similarity=0.126  Sum_probs=30.3

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN  217 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~  217 (371)
                      .++++||+|+ +++|.+.++.+...|+ +|++++++
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~   41 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRS   41 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecc
Confidence            5789999998 8999999998888999 89988876

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=95.08  E-value=0.071  Score=45.97  Aligned_cols=35  Identities=40%  Similarity=0.459  Sum_probs=30.9

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  217 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~  217 (371)
                      ...+|+|.|+|++|...++.+...|..+++.++.+
T Consensus        20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            34679999999999999999999999889999876

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK07775 short chain dehydrogenase; Provisional

Probab=95.06  E-value=0.16  Score=45.92  Aligned_cols=81  Identities=14%  Similarity=-0.019  Sum_probs=49.1

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcc-eEEcCCCCCCccHHHHHHHhh--CCC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMT--DGG  254 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~-~v~~~~~~~~~~~~~~i~~~~--~gg  254 (371)
                      +.+++||+|+ |.+|...+..+...|+ +|+++.++.++.+.+.    ..+.. .++..+-.+.++..+.+.+..  -++
T Consensus         9 ~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   87 (274)
T PRK07775          9 DRRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE   87 (274)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            4568999998 9999999988888899 8988888776544332    23432 122222101122222222221  136


Q ss_pred             cCEEEECCCC
Q 017457          255 ADYCFECIGL  264 (371)
Q Consensus       255 ~d~vid~~g~  264 (371)
                      +|++|++.|.
T Consensus        88 id~vi~~Ag~   97 (274)
T PRK07775         88 IEVLVSGAGD   97 (274)
T ss_pred             CCEEEECCCc
Confidence            8999988874

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=95.06  E-value=0.33  Score=42.73  Aligned_cols=33  Identities=27%  Similarity=0.259  Sum_probs=29.7

Q ss_pred             CCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcC
Q 017457          184 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI  216 (371)
Q Consensus       184 g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~  216 (371)
                      ..+|+|.|+|++|...+..+..+|..+++.++.
T Consensus        21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~   53 (228)
T cd00757          21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDD   53 (228)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence            578999999999999999999999989988864

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK06940 short chain dehydrogenase; Provisional

Probab=95.05  E-value=0.16  Score=45.98  Aligned_cols=99  Identities=19%  Similarity=0.303  Sum_probs=59.5

Q ss_pred             CCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcc-eEE--cCCCCCCccHHHHHHHhh-CCCc
Q 017457          184 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFI--NPATCGDKTVSQVIKEMT-DGGA  255 (371)
Q Consensus       184 g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~-~v~--~~~~~~~~~~~~~i~~~~-~gg~  255 (371)
                      ++++||+|+|++|.+.+..+. .|+ +|+.+++++++.+.+.    ..|.+ .++  |-.+  .+...+.+.+.. -+++
T Consensus         2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~i~~~~~~~~~~g~i   77 (275)
T PRK06940          2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS--RESVKALAATAQTLGPV   77 (275)
T ss_pred             CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCC--HHHHHHHHHHHHhcCCC
Confidence            467899999999999888774 798 8999998877654432    22322 122  3222  122333333221 1379


Q ss_pred             CEEEECCCChH------------------HHHHHHHHhhcCCceEEEECc
Q 017457          256 DYCFECIGLTS------------------VMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       256 d~vid~~g~~~------------------~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      |+++++.|...                  .++.+.+.+..+ |+++.++.
T Consensus        78 d~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-g~iv~isS  126 (275)
T PRK06940         78 TGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPG-GAGVVIAS  126 (275)
T ss_pred             CEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhC-CCEEEEEe
Confidence            99999887421                  134445556665 77666654

>PRK07577 short chain dehydrogenase; Provisional

Probab=95.01  E-value=0.1  Score=45.80  Aligned_cols=74  Identities=16%  Similarity=0.185  Sum_probs=48.3

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcc-eEEcCCCCCCccHHHHHHHhhCC-CcCEEE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-DFINPATCGDKTVSQVIKEMTDG-GADYCF  259 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~-~v~~~~~~~~~~~~~~i~~~~~g-g~d~vi  259 (371)
                      +++++||+|+ |++|...+..+...|+ +|+++.++.++     ..... ...|-.+  .+...+.+.+.... +.|+++
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~-----~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~d~vi   73 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID-----DFPGELFACDLAD--IEQTAATLAQINEIHPVDAIV   73 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc-----ccCceEEEeeCCC--HHHHHHHHHHHHHhCCCcEEE
Confidence            3678999998 9999999998888999 89999887654     11211 1123222  12333334443333 689999


Q ss_pred             ECCCC
Q 017457          260 ECIGL  264 (371)
Q Consensus       260 d~~g~  264 (371)
                      ++.+.
T Consensus        74 ~~ag~   78 (234)
T PRK07577         74 NNVGI   78 (234)
T ss_pred             ECCCC
Confidence            98774

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.98  E-value=0.21  Score=46.09  Aligned_cols=81  Identities=16%  Similarity=0.183  Sum_probs=47.0

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hHHHH----HHHhCcceEEcCCCCCCccHHHHHHHh-h-CCC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP-EKFEI----GKKFGITDFINPATCGDKTVSQVIKEM-T-DGG  254 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~-~~~~~----~~~lga~~v~~~~~~~~~~~~~~i~~~-~-~gg  254 (371)
                      +++++||+|+ +++|.+.+..+...|+ +|++.++.. ++.+.    ++..|.......-+..+.+-.+.+.+. . -+.
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~   89 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGG   89 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence            5789999998 9999998888888899 888887542 23222    223343221111111112222222211 1 247


Q ss_pred             cCEEEECCCC
Q 017457          255 ADYCFECIGL  264 (371)
Q Consensus       255 ~d~vid~~g~  264 (371)
                      +|++|++.|.
T Consensus        90 iD~li~nAG~   99 (306)
T PRK07792         90 LDIVVNNAGI   99 (306)
T ss_pred             CCEEEECCCC
Confidence            9999998874

>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]

Probab=94.94  E-value=0.2  Score=43.38  Aligned_cols=94  Identities=17%  Similarity=0.118  Sum_probs=61.1

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh-hHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP-EKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~-~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      +|++|||+|+|.+|.-=+.+....|+ +|+++.... .....+.+.+-...+. +.     +..  ..+ . ++++||-+
T Consensus        11 ~~k~VlvvGgG~va~rKa~~ll~~ga-~v~Vvs~~~~~el~~~~~~~~i~~~~-~~-----~~~--~~~-~-~~~lviaA   79 (210)
T COG1648          11 EGKKVLVVGGGSVALRKARLLLKAGA-DVTVVSPEFEPELKALIEEGKIKWIE-RE-----FDA--EDL-D-DAFLVIAA   79 (210)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhcCC-EEEEEcCCccHHHHHHHHhcCcchhh-cc-----cCh--hhh-c-CceEEEEe
Confidence            57899999999999999999999999 888887655 3333333222211111 11     111  011 1 48999999


Q ss_pred             CCChHHHHHHHHHhhcCCceEEEECcc
Q 017457          262 IGLTSVMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       262 ~g~~~~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      ++++..-+.+.+..... +.++.....
T Consensus        80 t~d~~ln~~i~~~a~~~-~i~vNv~D~  105 (210)
T COG1648          80 TDDEELNERIAKAARER-RILVNVVDD  105 (210)
T ss_pred             CCCHHHHHHHHHHHHHh-CCceeccCC
Confidence            99988445566666665 877777653

>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]

Probab=94.93  E-value=0.22  Score=47.04  Aligned_cols=59  Identities=27%  Similarity=0.188  Sum_probs=42.8

Q ss_pred             cchhhccccchhhhHHHHHHHcCC-CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017457          158 LGIACLLSCGVSTGVGAAWKVAGV-EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE  219 (371)
Q Consensus       158 ~~~aa~~~~~~~ta~~~l~~~~~~-~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~  219 (371)
                      ..+|.+..+.+.+- .+ ....+. -+|.+|.|.|.|.+|..+++.+..+|+ +|++++.+..
T Consensus       182 r~~aTg~Gv~~~~~-~a-~~~~g~~l~G~rVaVQG~GNVg~~aa~~l~~~GA-kvva~sds~g  241 (411)
T COG0334         182 RSEATGYGVFYAIR-EA-LKALGDDLEGARVAVQGFGNVGQYAAEKLHELGA-KVVAVSDSKG  241 (411)
T ss_pred             CCcccceehHHHHH-HH-HHHcCCCcCCCEEEEECccHHHHHHHHHHHHcCC-EEEEEEcCCC
Confidence            44555555444433 22 333343 589999999999999999999988899 8888876665

>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]

Probab=94.91  E-value=0.38  Score=43.70  Aligned_cols=99  Identities=17%  Similarity=0.203  Sum_probs=64.5

Q ss_pred             CeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh-CcceE-E-cCCCC-CCccHHHHHHHhhCCCcCEEE-
Q 017457          185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GITDF-I-NPATC-GDKTVSQVIKEMTDGGADYCF-  259 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l-ga~~v-~-~~~~~-~~~~~~~~i~~~~~gg~d~vi-  259 (371)
                      ++|||+|+|. |-.+=.++|.....++++++.+++=.+.+++. +.... . |.+-. -..+-.+.+++... ++|++| 
T Consensus        78 k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~-~fDvIi~  155 (282)
T COG0421          78 KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEE-KFDVIIV  155 (282)
T ss_pred             CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCC-cCCEEEE
Confidence            6999998755 45555778888777999999999888888762 21110 0 11000 01234445554433 899997 


Q ss_pred             ECCCC---------hHHHHHHHHHhhcCCceEEEEC
Q 017457          260 ECIGL---------TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       260 d~~g~---------~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      |++..         ..-++.+-++|+++ |.++.-+
T Consensus       156 D~tdp~gp~~~Lft~eFy~~~~~~L~~~-Gi~v~q~  190 (282)
T COG0421         156 DSTDPVGPAEALFTEEFYEGCRRALKED-GIFVAQA  190 (282)
T ss_pred             cCCCCCCcccccCCHHHHHHHHHhcCCC-cEEEEec
Confidence            66554         34578999999997 9887663

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=94.89  E-value=0.095  Score=42.75  Aligned_cols=94  Identities=20%  Similarity=0.190  Sum_probs=55.9

Q ss_pred             EEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCC---CCccHHHHHHHhhCCCcCEEEECCC
Q 017457          187 VAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATC---GDKTVSQVIKEMTDGGADYCFECIG  263 (371)
Q Consensus       187 VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~---~~~~~~~~i~~~~~gg~d~vid~~g  263 (371)
                      |+|+|+|.+|.+.+..++..|. .|..+.+.+ +.+.+++.|........+.   ........  ....+.+|++|-|+-
T Consensus         1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~viv~vK   76 (151)
T PF02558_consen    1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP--SADAGPYDLVIVAVK   76 (151)
T ss_dssp             EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH--GHHHSTESEEEE-SS
T ss_pred             CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc--hhccCCCcEEEEEec
Confidence            6899999999998888877999 899999887 7777776554211111000   00000000  111237999999987


Q ss_pred             ChHHHHHHHHHhhc----CCceEEEEC
Q 017457          264 LTSVMNDAFNSSRE----GWGKTVILG  286 (371)
Q Consensus       264 ~~~~~~~~~~~l~~----~~G~~v~~g  286 (371)
                      ... ...+++.+++    + ..++.+-
T Consensus        77 a~~-~~~~l~~l~~~~~~~-t~iv~~q  101 (151)
T PF02558_consen   77 AYQ-LEQALQSLKPYLDPN-TTIVSLQ  101 (151)
T ss_dssp             GGG-HHHHHHHHCTGEETT-EEEEEES
T ss_pred             ccc-hHHHHHHHhhccCCC-cEEEEEe
Confidence            766 4445554444    3 4565553

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]

Probab=94.88  E-value=1.2  Score=40.69  Aligned_cols=61  Identities=21%  Similarity=0.235  Sum_probs=44.6

Q ss_pred             HHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEc--CChhHHHHHHHhCcceEEcCC
Q 017457          176 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVD--INPEKFEIGKKFGITDFINPA  236 (371)
Q Consensus       176 ~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~--~~~~~~~~~~~lga~~v~~~~  236 (371)
                      .....+++|.+|+=--+|.+|.+.+.+|+++|++-++++.  -+.+|++.++.+|+.-++...
T Consensus        54 e~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~  116 (300)
T COG0031          54 EKRGLLKPGGTIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG  116 (300)
T ss_pred             HHcCCCCCCCEEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence            3456699999443333499999999999999994444443  366888999999998776554

>PRK06523 short chain dehydrogenase; Provisional

Probab=94.83  E-value=0.13  Score=46.07  Aligned_cols=37  Identities=14%  Similarity=0.164  Sum_probs=32.0

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK  220 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~  220 (371)
                      +|+++||+|+ |++|...++.+...|+ +|++++++.++
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~   45 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPD   45 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhh
Confidence            5789999998 9999999988888899 89999887543

>PRK01683 trans-aconitate 2-methyltransferase; Provisional

Probab=94.82  E-value=0.36  Score=43.31  Aligned_cols=97  Identities=15%  Similarity=0.165  Sum_probs=64.6

Q ss_pred             HHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcc-eEEcCCCCCCccHHHHHHHhhC-CC
Q 017457          177 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-DFINPATCGDKTVSQVIKEMTD-GG  254 (371)
Q Consensus       177 ~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~-~v~~~~~~~~~~~~~~i~~~~~-gg  254 (371)
                      ....+.++++||=+|+|. |..+..+++..+..+|++++.++...+.+++.-.. .++..      +..    .+.. ..
T Consensus        25 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~------d~~----~~~~~~~   93 (258)
T PRK01683         25 ARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEA------DIA----SWQPPQA   93 (258)
T ss_pred             hhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEEC------chh----ccCCCCC
Confidence            345567889999999865 66777888776433999999999888877664221 22221      111    1112 27


Q ss_pred             cCEEEECCC-----C-hHHHHHHHHHhhcCCceEEEE
Q 017457          255 ADYCFECIG-----L-TSVMNDAFNSSREGWGKTVIL  285 (371)
Q Consensus       255 ~d~vid~~g-----~-~~~~~~~~~~l~~~~G~~v~~  285 (371)
                      +|+|+....     . ...++.+.+.|+++ |.++..
T Consensus        94 fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~~~~~  129 (258)
T PRK01683         94 LDLIFANASLQWLPDHLELFPRLVSLLAPG-GVLAVQ  129 (258)
T ss_pred             ccEEEEccChhhCCCHHHHHHHHHHhcCCC-cEEEEE
Confidence            999985433     2 23578899999998 998775

>PRK08278 short chain dehydrogenase; Provisional

Probab=94.81  E-value=0.17  Score=45.79  Aligned_cols=36  Identities=33%  Similarity=0.380  Sum_probs=30.9

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE  219 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~  219 (371)
                      +++++||+|+ |++|...+..+...|+ +|++++++.+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~   41 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAE   41 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccc
Confidence            5689999998 9999999988888899 8999887653

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.80  E-value=0.2  Score=44.42  Aligned_cols=81  Identities=12%  Similarity=0.119  Sum_probs=47.9

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEE-EcCChhHHHHH----HHhCcc-eEEcCCCCCCccHHHHHHHhhC--C
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIG-VDINPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--G  253 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~-~~~~~~~~~~~----~~lga~-~v~~~~~~~~~~~~~~i~~~~~--g  253 (371)
                      +++++||+|+ |++|...+..+...|+ +|++ ..++.++.+.+    +..+.. .++..+-.+..+....+.+...  +
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG   81 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4679999998 9999999999988999 7665 46666554332    233432 2222221111222222332221  3


Q ss_pred             CcCEEEECCCC
Q 017457          254 GADYCFECIGL  264 (371)
Q Consensus       254 g~d~vid~~g~  264 (371)
                      ++|++|++.|.
T Consensus        82 ~id~vi~~ag~   92 (250)
T PRK08063         82 RLDVFVNNAAS   92 (250)
T ss_pred             CCCEEEECCCC
Confidence            68999998773

>PRK12743 oxidoreductase; Provisional

Probab=94.79  E-value=0.2  Score=44.76  Aligned_cols=80  Identities=13%  Similarity=0.052  Sum_probs=47.0

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhHHHHH----HHhCcc-eEEcCCCCCCccHHHHHHHhhC--CC
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVD-INPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--GG  254 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~-~~~~~~~~~----~~lga~-~v~~~~~~~~~~~~~~i~~~~~--gg  254 (371)
                      ++++||+|+ +++|...++.+...|+ +|+.+. ++.++.+.+    +..|.. +++..+-.+.+.....+.+...  +.
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR   80 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            578999998 9999999999988999 787764 344443332    334432 2222111011222222222221  26


Q ss_pred             cCEEEECCCC
Q 017457          255 ADYCFECIGL  264 (371)
Q Consensus       255 ~d~vid~~g~  264 (371)
                      +|+++.+.|.
T Consensus        81 id~li~~ag~   90 (256)
T PRK12743         81 IDVLVNNAGA   90 (256)
T ss_pred             CCEEEECCCC
Confidence            8999988773

>PLN02589 caffeoyl-CoA O-methyltransferase

Probab=94.79  E-value=0.26  Score=43.88  Aligned_cols=104  Identities=19%  Similarity=0.248  Sum_probs=68.3

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHHHHH
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLN--RASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIK  248 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~--g~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~  248 (371)
                      +....+..+.++||-+|.+ +|..++.+|+++  +. +|+.++.++++.+.+++    .|...-++...   .+..+.+.
T Consensus        71 L~~l~~~~~ak~iLEiGT~-~GySal~la~al~~~g-~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~---G~a~e~L~  145 (247)
T PLN02589         71 LNMLLKLINAKNTMEIGVY-TGYSLLATALALPEDG-KILAMDINRENYELGLPVIQKAGVAHKIDFRE---GPALPVLD  145 (247)
T ss_pred             HHHHHHHhCCCEEEEEeCh-hhHHHHHHHhhCCCCC-EEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe---ccHHHHHH
Confidence            3444566777889999873 477788888876  44 89999999987776644    56332223222   34555665


Q ss_pred             HhhC-----CCcCEEE-ECCCC--hHHHHHHHHHhhcCCceEEE
Q 017457          249 EMTD-----GGADYCF-ECIGL--TSVMNDAFNSSREGWGKTVI  284 (371)
Q Consensus       249 ~~~~-----gg~d~vi-d~~g~--~~~~~~~~~~l~~~~G~~v~  284 (371)
                      ++..     +.||.|| |+--.  ...++.+++.++++ |.++.
T Consensus       146 ~l~~~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~G-Gviv~  188 (247)
T PLN02589        146 QMIEDGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVG-GVIGY  188 (247)
T ss_pred             HHHhccccCCcccEEEecCCHHHhHHHHHHHHHhcCCC-eEEEE
Confidence            5532     4799998 55432  23467888999996 77654

>PLN02823 spermine synthase

Probab=94.77  E-value=0.3  Score=45.59  Aligned_cols=100  Identities=19%  Similarity=0.143  Sum_probs=60.8

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhC-cc-eEEcCCCC--CCccHHHHHHHhhCCCcCEE
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG-IT-DFINPATC--GDKTVSQVIKEMTDGGADYC  258 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lg-a~-~v~~~~~~--~~~~~~~~i~~~~~gg~d~v  258 (371)
                      ..++|||+|+|. |.++..+++..+..+|++++.+++-.+.+++.- .. ..++..+.  -..+..+.+++ ..+.+|+|
T Consensus       103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L~~-~~~~yDvI  180 (336)
T PLN02823        103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAELEK-RDEKFDVI  180 (336)
T ss_pred             CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHHhh-CCCCccEE
Confidence            457899998865 556667777776668999999998888887632 11 00100000  00223333432 33489999


Q ss_pred             E-ECCC----C-------hHHHH-HHHHHhhcCCceEEEE
Q 017457          259 F-ECIG----L-------TSVMN-DAFNSSREGWGKTVIL  285 (371)
Q Consensus       259 i-d~~g----~-------~~~~~-~~~~~l~~~~G~~v~~  285 (371)
                      | |...    +       ...++ .+.+.|+++ |.++.-
T Consensus       181 i~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~-Gvlv~q  219 (336)
T PLN02823        181 IGDLADPVEGGPCYQLYTKSFYERIVKPKLNPG-GIFVTQ  219 (336)
T ss_pred             EecCCCccccCcchhhccHHHHHHHHHHhcCCC-cEEEEe
Confidence            7 6422    1       12245 678899998 987654

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=94.76  E-value=0.24  Score=44.41  Aligned_cols=80  Identities=18%  Similarity=0.158  Sum_probs=47.5

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhHHHHH-HH----hCcc-eEEcCCCCCCccHHHHHHHhhC--
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVD-INPEKFEIG-KK----FGIT-DFINPATCGDKTVSQVIKEMTD--  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~-~~~~~~~~~-~~----lga~-~v~~~~~~~~~~~~~~i~~~~~--  252 (371)
                      +++++||+|+ +++|.+.+..+...|+ +|+.+. +++++.+.+ ++    .+.. ..+..+-.+.++..+.+.+...  
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGV-NIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDF   85 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            5789999998 9999999998888999 787775 344444332 12    2322 2222111111223333333222  


Q ss_pred             CCcCEEEECCC
Q 017457          253 GGADYCFECIG  263 (371)
Q Consensus       253 gg~d~vid~~g  263 (371)
                      +.+|+++++.|
T Consensus        86 g~id~lv~nAg   96 (260)
T PRK08416         86 DRVDFFISNAI   96 (260)
T ss_pred             CCccEEEECcc
Confidence            37899998875

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.72  E-value=0.23  Score=49.07  Aligned_cols=70  Identities=26%  Similarity=0.272  Sum_probs=49.3

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-----HHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcC
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE-----KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGAD  256 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~-----~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d  256 (371)
                      ..+++|+|+|+|.+|+.++.+++..|. +|++++..+.     ..+.+++.|+........    .        ....+|
T Consensus        14 ~~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~----~--------~~~~~D   80 (480)
T PRK01438         14 WQGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPGP----T--------LPEDTD   80 (480)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCCc----c--------ccCCCC
Confidence            457899999999999999999999999 8999885542     234456677765443222    1        011578


Q ss_pred             EEEECCCC
Q 017457          257 YCFECIGL  264 (371)
Q Consensus       257 ~vid~~g~  264 (371)
                      +|+-+.|-
T Consensus        81 ~Vv~s~Gi   88 (480)
T PRK01438         81 LVVTSPGW   88 (480)
T ss_pred             EEEECCCc
Confidence            88887775

>PRK05650 short chain dehydrogenase; Provisional

Probab=94.71  E-value=0.2  Score=45.13  Aligned_cols=79  Identities=19%  Similarity=0.206  Sum_probs=48.2

Q ss_pred             CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HHhCcce-EEcCCCCCCccHHHHHHHhhC--CCcC
Q 017457          185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMTD--GGAD  256 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~~-v~~~~~~~~~~~~~~i~~~~~--gg~d  256 (371)
                      +++||+|+ |++|...+..+...|+ +|++++++.++.+.+    +..+.+. ++..+-.+..+..+.+.....  +++|
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id   79 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGID   79 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            36899998 9999998888888899 899999887765543    2233321 222111011222222222211  3789


Q ss_pred             EEEECCCC
Q 017457          257 YCFECIGL  264 (371)
Q Consensus       257 ~vid~~g~  264 (371)
                      ++|++.|.
T Consensus        80 ~lI~~ag~   87 (270)
T PRK05650         80 VIVNNAGV   87 (270)
T ss_pred             EEEECCCC
Confidence            99998874

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=94.70  E-value=0.22  Score=46.16  Aligned_cols=89  Identities=15%  Similarity=0.196  Sum_probs=57.0

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      -.|++|.|+|.|.+|...++.++..|. +|++.+++.++..     +...+...     .++.+.+    . ..|+|+.+
T Consensus       134 l~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~~~~-----~~~~~~~~-----~~l~e~l----~-~aDvvv~~  197 (312)
T PRK15469        134 REDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRKSWP-----GVQSFAGR-----EELSAFL----S-QTRVLINL  197 (312)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCCCC-----Cceeeccc-----ccHHHHH----h-cCCEEEEC
Confidence            367899999999999999999999999 9999886543321     22111110     1222222    1 57888877


Q ss_pred             CCChHHH-----HHHHHHhhcCCceEEEECc
Q 017457          262 IGLTSVM-----NDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       262 ~g~~~~~-----~~~~~~l~~~~G~~v~~g~  287 (371)
                      .+.....     ...++.|+++ ..+|.+|.
T Consensus       198 lPlt~~T~~li~~~~l~~mk~g-a~lIN~aR  227 (312)
T PRK15469        198 LPNTPETVGIINQQLLEQLPDG-AYLLNLAR  227 (312)
T ss_pred             CCCCHHHHHHhHHHHHhcCCCC-cEEEECCC
Confidence            6643311     3456677776 77777763

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=94.69  E-value=0.36  Score=41.46  Aligned_cols=35  Identities=17%  Similarity=0.291  Sum_probs=30.6

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  217 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~  217 (371)
                      ...+|+|+|+|++|.-.+..+-..|.++++.++..
T Consensus        20 ~~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          20 RSARILLIGLKGLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             HhCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence            35789999999999999999999999889988753

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.69  E-value=0.28  Score=44.83  Aligned_cols=94  Identities=15%  Similarity=0.231  Sum_probs=66.7

Q ss_pred             ccccchhhhHHHHHHHcC-CCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCC
Q 017457          163 LLSCGVSTGVGAAWKVAG-VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD  240 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~-~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~  240 (371)
                      .+||+...... +.+..+ --.|++|.|+|. +.+|.-.+.++...|+ +|++..+...                     
T Consensus       138 ~~PcTp~aii~-lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ga-tVtv~~~~t~---------------------  194 (301)
T PRK14194        138 LTPCTPSGCLR-LLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHC-SVTVVHSRST---------------------  194 (301)
T ss_pred             CCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEECCCCC---------------------
Confidence            45666555554 334444 357999999998 6999999999999999 8888854321                     


Q ss_pred             ccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECcc
Q 017457          241 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       241 ~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                       +..+.++     .+|+|+-++|.+..+...+  ++++ ..++++|..
T Consensus       195 -~l~e~~~-----~ADIVIsavg~~~~v~~~~--ik~G-aiVIDvgin  233 (301)
T PRK14194        195 -DAKALCR-----QADIVVAAVGRPRLIDADW--LKPG-AVVIDVGIN  233 (301)
T ss_pred             -CHHHHHh-----cCCEEEEecCChhcccHhh--ccCC-cEEEEeccc
Confidence             1222221     5899999999887566554  8887 899999864

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=94.66  E-value=0.23  Score=47.71  Aligned_cols=76  Identities=20%  Similarity=0.271  Sum_probs=48.3

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhCc-ceEEcCCCCCCccHHHHHHHhhCCCcCEEE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGI-TDFINPATCGDKTVSQVIKEMTDGGADYCF  259 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga-~~v~~~~~~~~~~~~~~i~~~~~gg~d~vi  259 (371)
                      ++++++|+|+ |++|.+.+..+...|+ +|+++++++++.+... ..+. ...+..+-   .+. +.+.+.. +++|+++
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dv---sd~-~~v~~~l-~~IDiLI  250 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQV---GQE-AALAELL-EKVDILI  250 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeC---CCH-HHHHHHh-CCCCEEE
Confidence            4789999998 9999999988888899 8999988776554321 1111 11221111   121 2333333 3799999


Q ss_pred             ECCCC
Q 017457          260 ECIGL  264 (371)
Q Consensus       260 d~~g~  264 (371)
                      ++.|.
T Consensus       251 nnAGi  255 (406)
T PRK07424        251 INHGI  255 (406)
T ss_pred             ECCCc
Confidence            87763

>PRK13243 glyoxylate reductase; Reviewed

Probab=94.64  E-value=0.28  Score=45.86  Aligned_cols=87  Identities=20%  Similarity=0.273  Sum_probs=54.7

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  262 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~  262 (371)
                      .|++|.|+|.|.+|...++.++..|. +|++.+++.... .....+...         .++.+.+.     ..|+|+-++
T Consensus       149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~-~~~~~~~~~---------~~l~ell~-----~aDiV~l~l  212 (333)
T PRK13243        149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKPE-AEKELGAEY---------RPLEELLR-----ESDFVSLHV  212 (333)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCChh-hHHHcCCEe---------cCHHHHHh-----hCCEEEEeC
Confidence            57899999999999999999999999 899998765432 222333311         12222221     357776665


Q ss_pred             CChHH-----HHHHHHHhhcCCceEEEEC
Q 017457          263 GLTSV-----MNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       263 g~~~~-----~~~~~~~l~~~~G~~v~~g  286 (371)
                      +....     -...+..|+++ ..++.++
T Consensus       213 P~t~~T~~~i~~~~~~~mk~g-a~lIN~a  240 (333)
T PRK13243        213 PLTKETYHMINEERLKLMKPT-AILVNTA  240 (333)
T ss_pred             CCChHHhhccCHHHHhcCCCC-eEEEECc
Confidence            53221     13455566665 6666655

>PRK14103 trans-aconitate 2-methyltransferase; Provisional

Probab=94.63  E-value=0.41  Score=42.89  Aligned_cols=97  Identities=18%  Similarity=0.159  Sum_probs=66.6

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhh-C
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMT-D  252 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~-~  252 (371)
                      +.......++++||=+|+|. |..+..+++.. +. +|++++.++.-.+.+++.+.+.+.       .+.    .++. .
T Consensus        21 ll~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~-------~d~----~~~~~~   87 (255)
T PRK14103         21 LLARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART-------GDV----RDWKPK   87 (255)
T ss_pred             HHHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE-------cCh----hhCCCC
Confidence            33445667889999999866 66777787765 56 899999999888888776544222       121    1222 2


Q ss_pred             CCcCEEEECCC-----C-hHHHHHHHHHhhcCCceEEEE
Q 017457          253 GGADYCFECIG-----L-TSVMNDAFNSSREGWGKTVIL  285 (371)
Q Consensus       253 gg~d~vid~~g-----~-~~~~~~~~~~l~~~~G~~v~~  285 (371)
                      +.||+|+....     . ...+..+.+.|+++ |.++..
T Consensus        88 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~  125 (255)
T PRK14103         88 PDTDVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ  125 (255)
T ss_pred             CCceEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence            37999985332     2 33477888999998 998764

>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot

Probab=94.62  E-value=0.97  Score=34.99  Aligned_cols=87  Identities=21%  Similarity=0.315  Sum_probs=59.7

Q ss_pred             eEEEEcCChHHHHHHHHHHHc--CCCeEE-EEcCChhHHHH-HHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          186 TVAIFGLGAVGLAVAEGARLN--RASKII-GVDINPEKFEI-GKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~--g~~~Vi-~~~~~~~~~~~-~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      +|.|+|.|.+|.....-++..  +. +++ +.++++++.+. .+++|.. .+       .++.+.+.+.   .+|+|+-+
T Consensus         2 ~v~iiG~G~~g~~~~~~~~~~~~~~-~v~~v~d~~~~~~~~~~~~~~~~-~~-------~~~~~ll~~~---~~D~V~I~   69 (120)
T PF01408_consen    2 RVGIIGAGSIGRRHLRALLRSSPDF-EVVAVCDPDPERAEAFAEKYGIP-VY-------TDLEELLADE---DVDAVIIA   69 (120)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTTTE-EEEEEECSSHHHHHHHHHHTTSE-EE-------SSHHHHHHHT---TESEEEEE
T ss_pred             EEEEECCcHHHHHHHHHHHhcCCCc-EEEEEEeCCHHHHHHHHHHhccc-ch-------hHHHHHHHhh---cCCEEEEe
Confidence            588999999998887655554  45 444 56677776665 4567776 44       2343333322   79999999


Q ss_pred             CCChHHHHHHHHHhhcCCceEEEEC
Q 017457          262 IGLTSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       262 ~g~~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      ++.....+.+..++..+  .-+++.
T Consensus        70 tp~~~h~~~~~~~l~~g--~~v~~E   92 (120)
T PF01408_consen   70 TPPSSHAEIAKKALEAG--KHVLVE   92 (120)
T ss_dssp             SSGGGHHHHHHHHHHTT--SEEEEE
T ss_pred             cCCcchHHHHHHHHHcC--CEEEEE
Confidence            99887788888888874  556564

GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.60  E-value=0.22  Score=48.61  Aligned_cols=71  Identities=25%  Similarity=0.289  Sum_probs=48.7

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh-hHH----HHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCE
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP-EKF----EIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADY  257 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~-~~~----~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~  257 (371)
                      .+++|+|+|+|.+|+.++..+...|+ .|++++.+. +..    +.+.+.|...+. .+.   .+   .   . .+++|+
T Consensus         4 ~~k~v~iiG~g~~G~~~A~~l~~~G~-~V~~~d~~~~~~~~~~~~~l~~~~~~~~~-~~~---~~---~---~-~~~~d~   71 (450)
T PRK14106          4 KGKKVLVVGAGVSGLALAKFLKKLGA-KVILTDEKEEDQLKEALEELGELGIELVL-GEY---PE---E---F-LEGVDL   71 (450)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCEEEe-CCc---ch---h---H-hhcCCE
Confidence            47899999998899999999999999 899999864 222    334445654322 221   11   1   1 126899


Q ss_pred             EEECCCCh
Q 017457          258 CFECIGLT  265 (371)
Q Consensus       258 vid~~g~~  265 (371)
                      |+.++|..
T Consensus        72 vv~~~g~~   79 (450)
T PRK14106         72 VVVSPGVP   79 (450)
T ss_pred             EEECCCCC
Confidence            99988853

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.59  E-value=0.25  Score=43.53  Aligned_cols=80  Identities=23%  Similarity=0.321  Sum_probs=47.7

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhHHHHHHH----hCcc-eEEcCCCCCCccHHHHHHHhhC--CC
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGV-DINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--GG  254 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~-~~~~~~~~~~~~----lga~-~v~~~~~~~~~~~~~~i~~~~~--gg  254 (371)
                      ++++||+|+ |++|...+..+...|+ +|+++ .++.++.+.+..    .+.. .++..+-.+...+.+.+.....  ++
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGK   83 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            578999998 9999998888777899 88888 877766544322    2221 1222111011222222222211  26


Q ss_pred             cCEEEECCCC
Q 017457          255 ADYCFECIGL  264 (371)
Q Consensus       255 ~d~vid~~g~  264 (371)
                      +|++|.+.|.
T Consensus        84 id~vi~~ag~   93 (247)
T PRK05565         84 IDILVNNAGI   93 (247)
T ss_pred             CCEEEECCCc
Confidence            8999988764

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=94.58  E-value=0.2  Score=44.98  Aligned_cols=104  Identities=15%  Similarity=0.198  Sum_probs=60.2

Q ss_pred             CCCeEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCCh------hHHHHHHHhCc-ceEEcCCCCCCccHHHHHHHhhC
Q 017457          183 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINP------EKFEIGKKFGI-TDFINPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       183 ~g~~VLI~G~---g~~G~~ai~la~~~g~~~Vi~~~~~~------~~~~~~~~lga-~~v~~~~~~~~~~~~~~i~~~~~  252 (371)
                      .++++||+|+   +++|.+.+..+...|+ +|+++.++.      +..+.+.+.+. ...+.-+-.+.++..+.+.+...
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   83 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGA-ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ   83 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence            5789999996   4999998888888999 887775332      22333322221 12221111111233333333322


Q ss_pred             --CCcCEEEECCCCh-------H----------------------HHHHHHHHhhcCCceEEEECcc
Q 017457          253 --GGADYCFECIGLT-------S----------------------VMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       253 --gg~d~vid~~g~~-------~----------------------~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                        +.+|+++++.|..       .                      ..+.+++.+..+ |+++.++..
T Consensus        84 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~-g~Iv~isS~  149 (258)
T PRK07370         84 KWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG-GSIVTLTYL  149 (258)
T ss_pred             HcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC-CeEEEEecc
Confidence              3799999987731       0                      134566677776 898888753

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=94.58  E-value=0.25  Score=44.34  Aligned_cols=94  Identities=21%  Similarity=0.237  Sum_probs=61.4

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh----Ccc---eEEcCCCCCCccHHHHHHHhhCCC
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GIT---DFINPATCGDKTVSQVIKEMTDGG  254 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l----ga~---~v~~~~~~~~~~~~~~i~~~~~gg  254 (371)
                      .++.+||-+|+|. |..+..+++. |. +|++++.+++..+.+++.    |..   .++.      .+.. .+.....+.
T Consensus        43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~------~d~~-~l~~~~~~~  112 (255)
T PRK11036         43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIH------CAAQ-DIAQHLETP  112 (255)
T ss_pred             CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEE------cCHH-HHhhhcCCC
Confidence            4567888888865 6777778775 77 999999999888877652    321   1221      1221 122223347


Q ss_pred             cCEEEECC-----CC-hHHHHHHHHHhhcCCceEEEEC
Q 017457          255 ADYCFECI-----GL-TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       255 ~d~vid~~-----g~-~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      +|+|+...     .. ...+..+.+.|+++ |.++.+-
T Consensus       113 fD~V~~~~vl~~~~~~~~~l~~~~~~Lkpg-G~l~i~~  149 (255)
T PRK11036        113 VDLILFHAVLEWVADPKSVLQTLWSVLRPG-GALSLMF  149 (255)
T ss_pred             CCEEEehhHHHhhCCHHHHHHHHHHHcCCC-eEEEEEE
Confidence            99998432     22 23478899999998 9987653

>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]

Probab=94.56  E-value=0.42  Score=43.83  Aligned_cols=57  Identities=23%  Similarity=0.155  Sum_probs=47.1

Q ss_pred             HHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC---ChhHHHHHHHhCcceEEc
Q 017457          177 KVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI---NPEKFEIGKKFGITDFIN  234 (371)
Q Consensus       177 ~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~---~~~~~~~~~~lga~~v~~  234 (371)
                      ..+.+.||+++||-.. |.+|...+.++...|+ ++|++.+   +.||+..++.+|+.-+..
T Consensus        96 ~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gy-k~i~tmP~~ms~Ek~~~l~a~Gaeii~t  156 (362)
T KOG1252|consen   96 KKGLITPGKSTLIEPTSGNTGIGLAYMAALRGY-KCIITMPEKMSKEKRILLRALGAEIILT  156 (362)
T ss_pred             HcCCccCCceEEEecCCCchHHHHHHHHHHcCc-eEEEEechhhhHHHHHHHHHcCCEEEec
Confidence            3467999999999986 9999999999999999 7888765   447888889999876653

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=94.55  E-value=0.27  Score=45.59  Aligned_cols=77  Identities=19%  Similarity=0.187  Sum_probs=48.9

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHH-HHhCc---c-eE--EcCCCCCCccHHHHHHHhh--C
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNR-ASKIIGVDINPEKFEIG-KKFGI---T-DF--INPATCGDKTVSQVIKEMT--D  252 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g-~~~Vi~~~~~~~~~~~~-~~lga---~-~v--~~~~~~~~~~~~~~i~~~~--~  252 (371)
                      ++++||+|+ +++|.+.+..+...| + +|+.+++++++.+.+ +++..   . .+  .|-.+  ..+..+.+.+..  .
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~   79 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEW-HVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGS--LDSVRQFVQQFRESG   79 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCC--HHHHHHHHHHHHHhC
Confidence            678999998 999999888877889 7 899999888766544 23321   1 12  23222  122222233322  2


Q ss_pred             CCcCEEEECCC
Q 017457          253 GGADYCFECIG  263 (371)
Q Consensus       253 gg~d~vid~~g  263 (371)
                      +++|++|++.|
T Consensus        80 ~~iD~lI~nAG   90 (314)
T TIGR01289        80 RPLDALVCNAA   90 (314)
T ss_pred             CCCCEEEECCC
Confidence            37999998876

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=94.53  E-value=0.2  Score=51.65  Aligned_cols=81  Identities=19%  Similarity=0.263  Sum_probs=51.2

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-h----Ccc--eEEcCCCCCCccHHHHHHHhh--C
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F----GIT--DFINPATCGDKTVSQVIKEMT--D  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l----ga~--~v~~~~~~~~~~~~~~i~~~~--~  252 (371)
                      .++++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.+ +    +..  ..+..+-.+..+..+.+.+..  -
T Consensus       413 ~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~  491 (676)
T TIGR02632       413 ARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAY  491 (676)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            4789999998 9999999988888999 99999988876654422 1    221  122111101122323333322  2


Q ss_pred             CCcCEEEECCCC
Q 017457          253 GGADYCFECIGL  264 (371)
Q Consensus       253 gg~d~vid~~g~  264 (371)
                      +++|+++++.|.
T Consensus       492 g~iDilV~nAG~  503 (676)
T TIGR02632       492 GGVDIVVNNAGI  503 (676)
T ss_pred             CCCcEEEECCCC
Confidence            379999998874

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=94.49  E-value=0.16  Score=50.66  Aligned_cols=93  Identities=13%  Similarity=0.070  Sum_probs=58.7

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      .++++||+|+|++|.+++..+...|+ +|+++.++.++.+.+. .++.. ++...+     +    .+......|+++++
T Consensus       378 ~~k~vlIlGaGGagrAia~~L~~~G~-~V~i~nR~~e~a~~la~~l~~~-~~~~~~-----~----~~~~~~~~diiINt  446 (529)
T PLN02520        378 AGKLFVVIGAGGAGKALAYGAKEKGA-RVVIANRTYERAKELADAVGGQ-ALTLAD-----L----ENFHPEEGMILANT  446 (529)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCc-eeeHhH-----h----hhhccccCeEEEec
Confidence            46899999999999999999999999 9999999887766654 34422 222111     1    11111257899988


Q ss_pred             CCChHH-----HHHHHHHhhcCCceEEEECc
Q 017457          262 IGLTSV-----MNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       262 ~g~~~~-----~~~~~~~l~~~~G~~v~~g~  287 (371)
                      ++-...     .......+++. +.++++-.
T Consensus       447 T~vGm~~~~~~~pl~~~~l~~~-~~v~D~vY  476 (529)
T PLN02520        447 TSVGMQPNVDETPISKHALKHY-SLVFDAVY  476 (529)
T ss_pred             ccCCCCCCCCCCcccHhhCCCC-CEEEEecc
Confidence            763320     01123346665 66666654

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=94.48  E-value=0.7  Score=36.62  Aligned_cols=92  Identities=17%  Similarity=0.302  Sum_probs=56.5

Q ss_pred             EEEEcC-ChHHHHHHHHHHHcC--CCeEEEEcCC--hhHH-HHHHHhCcceEEcCCCCCCccHHHHH-------------
Q 017457          187 VAIFGL-GAVGLAVAEGARLNR--ASKIIGVDIN--PEKF-EIGKKFGITDFINPATCGDKTVSQVI-------------  247 (371)
Q Consensus       187 VLI~G~-g~~G~~ai~la~~~g--~~~Vi~~~~~--~~~~-~~~~~lga~~v~~~~~~~~~~~~~~i-------------  247 (371)
                      |.|+|+ |.+|..++...+...  + +|++..-.  -+++ +.++++.+..+.-.++    ...+.+             
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~----~~~~~l~~~~~~~~~~~~v   75 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADE----EAYEELKKALPSKGPGIEV   75 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSH----HHHHHHHHHHHHTTSSSEE
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH----HHHHHHHHHhhhcCCCCEE
Confidence            578898 999999999999876  5 66666533  2332 3356677776654443    222222             


Q ss_pred             -------HHhhC-CCcCEEEECCCChHHHHHHHHHhhcCCceEEEE
Q 017457          248 -------KEMTD-GGADYCFECIGLTSVMNDAFNSSREGWGKTVIL  285 (371)
Q Consensus       248 -------~~~~~-gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~  285 (371)
                             .++.. ..+|+|++++.+...+...+..++.+  +-+.+
T Consensus        76 ~~G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~g--k~iaL  119 (129)
T PF02670_consen   76 LSGPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAG--KDIAL  119 (129)
T ss_dssp             EESHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTT--SEEEE
T ss_pred             EeChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCC--CeEEE
Confidence                   23222 27899998888877788888888874  44444

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PLN03075 nicotianamine synthase; Provisional

Probab=94.47  E-value=0.31  Score=44.46  Aligned_cols=99  Identities=18%  Similarity=0.200  Sum_probs=64.8

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHHhC-----cceEEcCCCCCCccHHHHHHHhhCCCc
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKKFG-----ITDFINPATCGDKTVSQVIKEMTDGGA  255 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~lg-----a~~v~~~~~~~~~~~~~~i~~~~~gg~  255 (371)
                      .++++|+-+|+|+.++.++.+++... -.+++.++.+++..+.+++.-     ...-+....   .+..+. .. ..++|
T Consensus       122 ~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~---~Da~~~-~~-~l~~F  196 (296)
T PLN03075        122 GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHT---ADVMDV-TE-SLKEY  196 (296)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEE---Cchhhc-cc-ccCCc
Confidence            37799999999999998888886543 238999999999888876632     111111111   222211 00 12389


Q ss_pred             CEEEECC-------CChHHHHHHHHHhhcCCceEEEEC
Q 017457          256 DYCFECI-------GLTSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       256 d~vid~~-------g~~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      |+||-.+       .-...+..+.+.|+++ |.++.-.
T Consensus       197 DlVF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr~  233 (296)
T PLN03075        197 DVVFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLRS  233 (296)
T ss_pred             CEEEEecccccccccHHHHHHHHHHhcCCC-cEEEEec
Confidence            9998553       1233578999999997 8877654

>PRK01581 speE spermidine synthase; Validated

Probab=94.45  E-value=0.59  Score=43.88  Aligned_cols=97  Identities=15%  Similarity=0.132  Sum_probs=63.4

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhC-----------cc--eEEcCCCCCCccHHHHH
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG-----------IT--DFINPATCGDKTVSQVI  247 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lg-----------a~--~v~~~~~~~~~~~~~~i  247 (371)
                      ....++|||+|+|. |.++..+++..+..+|++++.+++-.+.++++.           ..  .++.      .+..+.+
T Consensus       148 h~~PkrVLIIGgGd-G~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi------~Da~~fL  220 (374)
T PRK01581        148 VIDPKRVLILGGGD-GLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHV------CDAKEFL  220 (374)
T ss_pred             CCCCCEEEEECCCH-HHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEE------CcHHHHH
Confidence            45567999999764 666777777666569999999999888887521           01  1111      2333334


Q ss_pred             HHhhCCCcCEEE-ECCCC----------hHHHHHHHHHhhcCCceEEEEC
Q 017457          248 KEMTDGGADYCF-ECIGL----------TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       248 ~~~~~gg~d~vi-d~~g~----------~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      .+ +.+.+|+|| |....          ...+..+.+.|+++ |.++.-.
T Consensus       221 ~~-~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs  268 (374)
T PRK01581        221 SS-PSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQS  268 (374)
T ss_pred             Hh-cCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEec
Confidence            33 334899998 53221          12467889999998 9987664

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=94.45  E-value=0.2  Score=47.11  Aligned_cols=77  Identities=12%  Similarity=0.078  Sum_probs=48.5

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhC--cc-eEEcCCCCCCccHHHHHHHhhCC-CcC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFG--IT-DFINPATCGDKTVSQVIKEMTDG-GAD  256 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lg--a~-~v~~~~~~~~~~~~~~i~~~~~g-g~d  256 (371)
                      +|++|||+|+ |.+|...+..+...|. +|++++++....... ..++  .. ..+..+-   .+ .+.+.++... ++|
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl---~~-~~~~~~~~~~~~~d   77 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDI---RD-AAKLRKAIAEFKPE   77 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccC---CC-HHHHHHHHhhcCCC
Confidence            5789999997 9999999999998999 899888766543221 1222  11 1121111   12 2234444434 689


Q ss_pred             EEEECCCC
Q 017457          257 YCFECIGL  264 (371)
Q Consensus       257 ~vid~~g~  264 (371)
                      +||++.+.
T Consensus        78 ~vih~A~~   85 (349)
T TIGR02622        78 IVFHLAAQ   85 (349)
T ss_pred             EEEECCcc
Confidence            99998873

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=94.45  E-value=0.13  Score=46.30  Aligned_cols=75  Identities=19%  Similarity=0.273  Sum_probs=47.5

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceE-EcCCCCCCccHHHHHHHhhC--CCcCEE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMTD--GGADYC  258 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~--gg~d~v  258 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|+.++++.++.+.   .....+ .|-.+  .++..+.+.+...  +.+|++
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~id~l   81 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENYQFVPTDVSS--AEEVNHTVAEIIEKFGRIDGL   81 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---CceEEEEccCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence            4789999997 9999999999888999 89988877654321   111111 23222  1223333333222  378999


Q ss_pred             EECCC
Q 017457          259 FECIG  263 (371)
Q Consensus       259 id~~g  263 (371)
                      +++.|
T Consensus        82 i~~Ag   86 (266)
T PRK06171         82 VNNAG   86 (266)
T ss_pred             EECCc
Confidence            99877

>PLN02244 tocopherol O-methyltransferase

Probab=94.45  E-value=0.14  Score=48.07  Aligned_cols=94  Identities=17%  Similarity=0.263  Sum_probs=62.1

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh----Ccc---eEEcCCCCCCccHHHHHHHhhCCC
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GIT---DFINPATCGDKTVSQVIKEMTDGG  254 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l----ga~---~v~~~~~~~~~~~~~~i~~~~~gg  254 (371)
                      +++++||=+|+|. |..+..+++..|+ +|++++.+++..+.+++.    |..   .++..+-   .++     .+..+.
T Consensus       117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~---~~~-----~~~~~~  186 (340)
T PLN02244        117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVADA---LNQ-----PFEDGQ  186 (340)
T ss_pred             CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCc---ccC-----CCCCCC
Confidence            6788999999865 6677788887788 999999999877665542    321   1111111   110     112337


Q ss_pred             cCEEEECCCC------hHHHHHHHHHhhcCCceEEEEC
Q 017457          255 ADYCFECIGL------TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       255 ~d~vid~~g~------~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      ||+|+.....      ...++.+.+.|+++ |+++...
T Consensus       187 FD~V~s~~~~~h~~d~~~~l~e~~rvLkpG-G~lvi~~  223 (340)
T PLN02244        187 FDLVWSMESGEHMPDKRKFVQELARVAAPG-GRIIIVT  223 (340)
T ss_pred             ccEEEECCchhccCCHHHHHHHHHHHcCCC-cEEEEEE
Confidence            9999853321      23478899999998 9988764

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=94.44  E-value=0.33  Score=40.83  Aligned_cols=33  Identities=24%  Similarity=0.268  Sum_probs=29.0

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      +|+|+|+|++|...++.+...|..+++.++...
T Consensus         1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            489999999999999998889998899998654

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=94.42  E-value=0.32  Score=39.73  Aligned_cols=96  Identities=19%  Similarity=0.245  Sum_probs=62.5

Q ss_pred             CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCC---CCccHHHHHHHhhCC-CcCEEE
Q 017457          185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATC---GDKTVSQVIKEMTDG-GADYCF  259 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~---~~~~~~~~i~~~~~g-g~d~vi  259 (371)
                      .+|+|+|+ |.+|.+.++.-|+.++ -|.-++-+++..     ..+..+++....   -++...+++.+...+ ++|.||
T Consensus         4 grVivYGGkGALGSacv~~Fkanny-wV~siDl~eNe~-----Ad~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav~   77 (236)
T KOG4022|consen    4 GRVIVYGGKGALGSACVEFFKANNY-WVLSIDLSENEQ-----ADSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAVF   77 (236)
T ss_pred             ceEEEEcCcchHhHHHHHHHHhcCe-EEEEEeeccccc-----ccceEEecCCcchhHHHHHHHHHHHHhhcccccceEE
Confidence            57999998 9999999999999999 888887655432     223334443330   012233334444556 899999


Q ss_pred             ECCCCh--------------------------HHHHHHHHHhhcCCceEEEECc
Q 017457          260 ECIGLT--------------------------SVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       260 d~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      ...|+=                          ...+.+-.+|+++ |-+.+.|.
T Consensus        78 CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~G-GLL~LtGA  130 (236)
T KOG4022|consen   78 CVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPG-GLLQLTGA  130 (236)
T ss_pred             EeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCC-ceeeeccc
Confidence            876641                          0234455678997 88887775

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=94.41  E-value=0.56  Score=44.35  Aligned_cols=98  Identities=17%  Similarity=0.256  Sum_probs=62.4

Q ss_pred             CeEEEEcC-ChHHHHHHHHHHHc--CCCeEEEEc--CChhHHH-HHHHhCcceEEcCCCCCCccH--------------H
Q 017457          185 STVAIFGL-GAVGLAVAEGARLN--RASKIIGVD--INPEKFE-IGKKFGITDFINPATCGDKTV--------------S  244 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la~~~--g~~~Vi~~~--~~~~~~~-~~~~lga~~v~~~~~~~~~~~--------------~  244 (371)
                      ++|.|+|+ |.+|..++...+..  .+ +|+++.  ++.+++. .+++++...++-.++.....+              .
T Consensus         2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~   80 (385)
T PRK05447          2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGE   80 (385)
T ss_pred             ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEECh
Confidence            57899997 99999999888754  56 666664  4444444 456688776654332000001              1


Q ss_pred             HHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEE
Q 017457          245 QVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVI  284 (371)
Q Consensus       245 ~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~  284 (371)
                      +.+.++... .+|+|++++++...+...+.+++.+ -++.+
T Consensus        81 ~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aG-K~VaL  120 (385)
T PRK05447         81 EGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAG-KRIAL  120 (385)
T ss_pred             hHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCC-CcEEE
Confidence            122223333 6899999999877788899999875 44443

>PLN02928 oxidoreductase family protein

Probab=94.37  E-value=0.28  Score=46.14  Aligned_cols=97  Identities=23%  Similarity=0.331  Sum_probs=58.7

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhC-----cceEEcCCCCCCccHHHHHHHhhCCCcC
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG-----ITDFINPATCGDKTVSQVIKEMTDGGAD  256 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lg-----a~~v~~~~~~~~~~~~~~i~~~~~gg~d  256 (371)
                      -.|+++.|+|.|.+|...++.++.+|. +|++.+++..+.. ...++     ...+.+... ...++.+.+.     ..|
T Consensus       157 l~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~L~ell~-----~aD  228 (347)
T PLN02928        157 LFGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSWTSEP-EDGLLIPNGDVDDLVDEKG-GHEDIYEFAG-----EAD  228 (347)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCCChhh-hhhhccccccccccccccC-cccCHHHHHh-----hCC
Confidence            357899999999999999999999999 9999987632211 11110     000110000 0012322222     478


Q ss_pred             EEEECCCChH-----HHHHHHHHhhcCCceEEEECc
Q 017457          257 YCFECIGLTS-----VMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       257 ~vid~~g~~~-----~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      +|+.+.+...     .-...+..|+++ ..+|.++.
T Consensus       229 iVvl~lPlt~~T~~li~~~~l~~Mk~g-a~lINvaR  263 (347)
T PLN02928        229 IVVLCCTLTKETAGIVNDEFLSSMKKG-ALLVNIAR  263 (347)
T ss_pred             EEEECCCCChHhhcccCHHHHhcCCCC-eEEEECCC
Confidence            8887766322     124667778886 77777763

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=94.35  E-value=0.3  Score=43.02  Aligned_cols=79  Identities=20%  Similarity=0.265  Sum_probs=47.0

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH-HHH----HHHhCcc-eEE--cCCCCCCccHHHHHHHhhC-
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-FEI----GKKFGIT-DFI--NPATCGDKTVSQVIKEMTD-  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~-~~~----~~~lga~-~v~--~~~~~~~~~~~~~i~~~~~-  252 (371)
                      +++++||+|+ |.+|...+..+...|+ +|+++.++..+ .+.    ++..+.. .++  |-.+  ...+.+.+.+... 
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~   80 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSD--AESVERAVDEAKAE   80 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            4578999998 9999999999988999 77666655432 222    2222322 222  2222  1223333333322 


Q ss_pred             -CCcCEEEECCCC
Q 017457          253 -GGADYCFECIGL  264 (371)
Q Consensus       253 -gg~d~vid~~g~  264 (371)
                       +++|.++.+.|.
T Consensus        81 ~~~id~vi~~ag~   93 (248)
T PRK05557         81 FGGVDILVNNAGI   93 (248)
T ss_pred             cCCCCEEEECCCc
Confidence             268999988764

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.34  E-value=0.31  Score=47.60  Aligned_cols=71  Identities=20%  Similarity=0.158  Sum_probs=48.0

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh----HHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEE
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE----KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYC  258 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~----~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~v  258 (371)
                      .+++++|+|+|.+|++++.+++..|+ +|++.+.+..    ..+.+.+.|.......+.   .+.   +    ..++|+|
T Consensus         4 ~~k~v~v~G~g~~G~s~a~~l~~~G~-~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~---~~~---~----~~~~d~v   72 (447)
T PRK02472          4 QNKKVLVLGLAKSGYAAAKLLHKLGA-NVTVNDGKPFSENPEAQELLEEGIKVICGSHP---LEL---L----DEDFDLM   72 (447)
T ss_pred             CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEcCCCccchhHHHHHHhcCCEEEeCCCC---HHH---h----cCcCCEE
Confidence            46889999998899999999999999 8999986542    223455567643332222   111   1    1148999


Q ss_pred             EECCCC
Q 017457          259 FECIGL  264 (371)
Q Consensus       259 id~~g~  264 (371)
                      +.+.|-
T Consensus        73 V~s~gi   78 (447)
T PRK02472         73 VKNPGI   78 (447)
T ss_pred             EECCCC
Confidence            987764

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=94.33  E-value=0.21  Score=43.91  Aligned_cols=79  Identities=14%  Similarity=0.186  Sum_probs=45.9

Q ss_pred             CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHHH-HHHh---Ccc-eEEcCCCCCCccHHHHHHHhh--CCCc
Q 017457          185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEI-GKKF---GIT-DFINPATCGDKTVSQVIKEMT--DGGA  255 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~-~~~~~~~-~~~l---ga~-~v~~~~~~~~~~~~~~i~~~~--~gg~  255 (371)
                      +++||+|+ |++|...+..+...|+ +|+++.+ ++++.+. ..+.   +.. .++..+-.+...+.+.+.++.  .+.+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGY-RVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPI   79 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            47899997 9999999999988999 8888776 4443332 2222   211 122111101122333333322  1368


Q ss_pred             CEEEECCCC
Q 017457          256 DYCFECIGL  264 (371)
Q Consensus       256 d~vid~~g~  264 (371)
                      |++|++.|.
T Consensus        80 d~vi~~ag~   88 (242)
T TIGR01829        80 DVLVNNAGI   88 (242)
T ss_pred             cEEEECCCC
Confidence            999998873

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK05855 short chain dehydrogenase; Validated

Probab=94.32  E-value=0.23  Score=49.95  Aligned_cols=79  Identities=16%  Similarity=0.234  Sum_probs=51.4

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcc-eE--EcCCCCCCccHHHHHHHhhC--
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DF--INPATCGDKTVSQVIKEMTD--  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~-~v--~~~~~~~~~~~~~~i~~~~~--  252 (371)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.    ..|.. .+  .|-.+  .+...+.+.+...  
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~  390 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSD--ADAMEAFAEWVRAEH  390 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHhc
Confidence            4578999998 9999998888888999 8999999887765442    23432 12  22222  1222222333222  


Q ss_pred             CCcCEEEECCCC
Q 017457          253 GGADYCFECIGL  264 (371)
Q Consensus       253 gg~d~vid~~g~  264 (371)
                      +.+|+++++.|.
T Consensus       391 g~id~lv~~Ag~  402 (582)
T PRK05855        391 GVPDIVVNNAGI  402 (582)
T ss_pred             CCCcEEEECCcc
Confidence            368999998874

>PRK06141 ornithine cyclodeaminase; Validated

Probab=94.32  E-value=1.1  Score=41.59  Aligned_cols=103  Identities=13%  Similarity=0.051  Sum_probs=63.0

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHH-HcCCCeEEEEcCChhHHHHHHH-h---CcceEEcCCCCCCccHHHHHHHhhCCCcC
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGAR-LNRASKIIGVDINPEKFEIGKK-F---GITDFINPATCGDKTVSQVIKEMTDGGAD  256 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~-~~g~~~Vi~~~~~~~~~~~~~~-l---ga~~v~~~~~~~~~~~~~~i~~~~~gg~d  256 (371)
                      ...++|+|+|+|..|.+.+.... ..+..+|.+..+++++.+.+.+ +   |.. +...     .+..+.+     .++|
T Consensus       123 ~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~-~~~~-----~~~~~av-----~~aD  191 (314)
T PRK06141        123 KDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFD-AEVV-----TDLEAAV-----RQAD  191 (314)
T ss_pred             CCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCc-eEEe-----CCHHHHH-----hcCC
Confidence            56789999999999999876444 4676699999999888665543 3   321 1111     1222222     2689


Q ss_pred             EEEECCCChHH-HHHHHHHhhcCCceEEEECccCCCCceecCHH
Q 017457          257 YCFECIGLTSV-MNDAFNSSREGWGKTVILGVEMHGSPISLNSI  299 (371)
Q Consensus       257 ~vid~~g~~~~-~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~  299 (371)
                      +|+.++++... +.  .+.++++ -.+...|. ......+++..
T Consensus       192 IVi~aT~s~~pvl~--~~~l~~g-~~i~~ig~-~~~~~~El~~~  231 (314)
T PRK06141        192 IISCATLSTEPLVR--GEWLKPG-THLDLVGN-FTPDMRECDDE  231 (314)
T ss_pred             EEEEeeCCCCCEec--HHHcCCC-CEEEeeCC-CCcccccCCHH
Confidence            99998886531 21  2457775 55555554 22333444443

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.30  E-value=0.39  Score=43.90  Aligned_cols=93  Identities=15%  Similarity=0.219  Sum_probs=65.5

Q ss_pred             ccccchhhhHHHHHHHcC-CCCCCeEEEEc-CChHHHHHHHHHHHcCCCeEEEEc-CChhHHHHHHHhCcceEEcCCCCC
Q 017457          163 LLSCGVSTGVGAAWKVAG-VEVGSTVAIFG-LGAVGLAVAEGARLNRASKIIGVD-INPEKFEIGKKFGITDFINPATCG  239 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~-~~~g~~VLI~G-~g~~G~~ai~la~~~g~~~Vi~~~-~~~~~~~~~~~lga~~v~~~~~~~  239 (371)
                      .+||+....+. +.+..+ --.|++|+|+| .+.+|.-.+.++...|+ .|++.. ++.                     
T Consensus       137 ~~PcTp~ai~~-ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~~rT~---------------------  193 (296)
T PRK14188        137 LVPCTPLGCMM-LLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAHSRTR---------------------  193 (296)
T ss_pred             CcCCCHHHHHH-HHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEECCCCC---------------------
Confidence            45666555554 333333 35799999999 59999999999988999 888874 332                     


Q ss_pred             CccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECcc
Q 017457          240 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       240 ~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                        ++.+.++     .+|+|+-++|.+..+...+  ++++ ..++++|..
T Consensus       194 --~l~e~~~-----~ADIVIsavg~~~~v~~~~--lk~G-avVIDvGin  232 (296)
T PRK14188        194 --DLPAVCR-----RADILVAAVGRPEMVKGDW--IKPG-ATVIDVGIN  232 (296)
T ss_pred             --CHHHHHh-----cCCEEEEecCChhhcchhe--ecCC-CEEEEcCCc
Confidence              1111111     5799999999988555554  8887 899999974

>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates

Probab=94.30  E-value=0.71  Score=38.01  Aligned_cols=87  Identities=23%  Similarity=0.275  Sum_probs=56.5

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-HHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE-KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~-~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      ++++|.|+|-|..|++.++-+|-.|. +|++..+... ..+.+++.|.. +        .+..+.++     ..|+|+-.
T Consensus         3 ~~k~IAViGyGsQG~a~AlNLrDSG~-~V~Vglr~~s~s~~~A~~~Gf~-v--------~~~~eAv~-----~aDvV~~L   67 (165)
T PF07991_consen    3 KGKTIAVIGYGSQGHAHALNLRDSGV-NVIVGLREGSASWEKAKADGFE-V--------MSVAEAVK-----KADVVMLL   67 (165)
T ss_dssp             CTSEEEEES-SHHHHHHHHHHHHCC--EEEEEE-TTCHHHHHHHHTT-E-C--------CEHHHHHH-----C-SEEEE-
T ss_pred             CCCEEEEECCChHHHHHHHHHHhCCC-CEEEEecCCCcCHHHHHHCCCe-e--------ccHHHHHh-----hCCEEEEe
Confidence            57899999999999999999999999 7776666555 78888888864 2        23444443     58999988


Q ss_pred             CCChH---HH-HHHHHHhhcCCceEEEEC
Q 017457          262 IGLTS---VM-NDAFNSSREGWGKTVILG  286 (371)
Q Consensus       262 ~g~~~---~~-~~~~~~l~~~~G~~v~~g  286 (371)
                      +++..   .+ +.+...|++  |....|+
T Consensus        68 ~PD~~q~~vy~~~I~p~l~~--G~~L~fa   94 (165)
T PF07991_consen   68 LPDEVQPEVYEEEIAPNLKP--GATLVFA   94 (165)
T ss_dssp             S-HHHHHHHHHHHHHHHS-T--T-EEEES
T ss_pred             CChHHHHHHHHHHHHhhCCC--CCEEEeC
Confidence            88754   22 455567777  4555554

This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=94.28  E-value=0.36  Score=45.64  Aligned_cols=35  Identities=20%  Similarity=0.204  Sum_probs=31.2

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  217 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~  217 (371)
                      .+.+|||+|+|++|..++..+...|.++++.++..
T Consensus        27 ~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D   61 (355)
T PRK05597         27 FDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDD   61 (355)
T ss_pred             hCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            35789999999999999999999999999998864

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=94.26  E-value=0.48  Score=38.24  Aligned_cols=94  Identities=14%  Similarity=0.083  Sum_probs=62.8

Q ss_pred             ccccchhhhHHHHHHHcC-CCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCC
Q 017457          163 LLSCGVSTGVGAAWKVAG-VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD  240 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~-~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~  240 (371)
                      ..+|....... +.+..+ --.|++|+|+|- ..+|.-.+.++...|+ .|+.+.+...                     
T Consensus         7 ~~p~t~~a~~~-ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~ga-tV~~~~~~t~---------------------   63 (140)
T cd05212           7 FVSPVAKAVKE-LLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGA-TVYSCDWKTI---------------------   63 (140)
T ss_pred             ccccHHHHHHH-HHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeCCCCc---------------------
Confidence            34444443333 233333 357999999997 8999999999999999 8888874321                     


Q ss_pred             ccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECcc
Q 017457          241 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       241 ~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                       ++.+.++     .+|+++.++|....+.  -+.++++ ..++++|..
T Consensus        64 -~l~~~v~-----~ADIVvsAtg~~~~i~--~~~ikpG-a~Vidvg~~  102 (140)
T cd05212          64 -QLQSKVH-----DADVVVVGSPKPEKVP--TEWIKPG-ATVINCSPT  102 (140)
T ss_pred             -CHHHHHh-----hCCEEEEecCCCCccC--HHHcCCC-CEEEEcCCC
Confidence             2222222     5899999999876333  4458886 888887753

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=94.24  E-value=0.29  Score=46.31  Aligned_cols=82  Identities=22%  Similarity=0.266  Sum_probs=47.1

Q ss_pred             CCCCeEEEEcC-ChHHHH--HHHHHHHcCCCeEEEEcCChh--H--------------HHHHHHhCcc-eEEcCCCCCCc
Q 017457          182 EVGSTVAIFGL-GAVGLA--VAEGARLNRASKIIGVDINPE--K--------------FEIGKKFGIT-DFINPATCGDK  241 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~--ai~la~~~g~~~Vi~~~~~~~--~--------------~~~~~~lga~-~v~~~~~~~~~  241 (371)
                      ..++++||+|+ +++|++  .++.+ ..|+ +|+++....+  +              .+.+++.|.. ..+.-+-.+++
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA-~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E  116 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGA-DTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDE  116 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCC-eEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence            45689999997 899999  34444 7899 7777763221  1              2234455643 22322221122


Q ss_pred             cHHHHHHHhhC--CCcCEEEECCCCh
Q 017457          242 TVSQVIKEMTD--GGADYCFECIGLT  265 (371)
Q Consensus       242 ~~~~~i~~~~~--gg~d~vid~~g~~  265 (371)
                      ...+.+.....  |++|+++++.+.+
T Consensus       117 ~v~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        117 IKQKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCccC
Confidence            33333333322  3799999998876

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=94.24  E-value=0.48  Score=43.39  Aligned_cols=70  Identities=21%  Similarity=0.226  Sum_probs=49.0

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCCh
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT  265 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~~  265 (371)
                      +|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|....        .+..+.+.     ..|+||.|+...
T Consensus         1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~--------~~~~~~~~-----~aDivi~~vp~~   66 (291)
T TIGR01505         1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGAVTA--------ETARQVTE-----QADVIFTMVPDS   66 (291)
T ss_pred             CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCccc--------CCHHHHHh-----cCCEEEEecCCH
Confidence            37788999999987777777898 89999999999888877765311        12222221     467888777765


Q ss_pred             HHHH
Q 017457          266 SVMN  269 (371)
Q Consensus       266 ~~~~  269 (371)
                      ....
T Consensus        67 ~~~~   70 (291)
T TIGR01505        67 PQVE   70 (291)
T ss_pred             HHHH
Confidence            4333

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.23  E-value=0.43  Score=43.27  Aligned_cols=94  Identities=19%  Similarity=0.180  Sum_probs=65.1

Q ss_pred             ccccchhhhHHHHHHHcCC-CCCCeEEEEcCC-hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCC
Q 017457          163 LLSCGVSTGVGAAWKVAGV-EVGSTVAIFGLG-AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD  240 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~-~~g~~VLI~G~g-~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~  240 (371)
                      ..||+...... +.+..++ -.|++|+|+|.| .+|.-.+.++...|+ .|+++.+..                      
T Consensus       136 ~~PcTp~avi~-lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gA-tVtv~hs~t----------------------  191 (285)
T PRK14191        136 FVPATPMGVMR-LLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGA-SVSVCHILT----------------------  191 (285)
T ss_pred             CCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-EEEEEeCCc----------------------
Confidence            45666555554 3444444 469999999985 999999999999999 888774321                      


Q ss_pred             ccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECcc
Q 017457          241 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       241 ~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      .++.+.++     .+|+|+-++|.+..+.  -+.++++ ..++++|..
T Consensus       192 ~~l~~~~~-----~ADIvV~AvG~p~~i~--~~~vk~G-avVIDvGi~  231 (285)
T PRK14191        192 KDLSFYTQ-----NADIVCVGVGKPDLIK--ASMVKKG-AVVVDIGIN  231 (285)
T ss_pred             HHHHHHHH-----hCCEEEEecCCCCcCC--HHHcCCC-cEEEEeecc
Confidence            12222222     5899999999877332  3467887 899999964

>PLN00016 RNA-binding protein; Provisional

Probab=94.22  E-value=0.5  Score=45.00  Aligned_cols=97  Identities=12%  Similarity=0.099  Sum_probs=61.3

Q ss_pred             CCCCeEEEE----cC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHH-----------HHHhCcceEEcCCCCCCccHHH
Q 017457          182 EVGSTVAIF----GL-GAVGLAVAEGARLNRASKIIGVDINPEKFEI-----------GKKFGITDFINPATCGDKTVSQ  245 (371)
Q Consensus       182 ~~g~~VLI~----G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~-----------~~~lga~~v~~~~~~~~~~~~~  245 (371)
                      ...++|||+    |+ |.+|...+..+...|. +|++++++......           +...|...+.       .+..+
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~-------~D~~d  121 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGH-EVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVW-------GDPAD  121 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCCC-EEEEEecCCcchhhhccCchhhhhHhhhcCceEEE-------ecHHH
Confidence            334689999    98 9999999998888898 89999887654221           1223444332       12222


Q ss_pred             HHHHhhCC-CcCEEEECCCChH-HHHHHHHHhhcC-CceEEEECc
Q 017457          246 VIKEMTDG-GADYCFECIGLTS-VMNDAFNSSREG-WGKTVILGV  287 (371)
Q Consensus       246 ~i~~~~~g-g~d~vid~~g~~~-~~~~~~~~l~~~-~G~~v~~g~  287 (371)
                       +.+.... ++|+|+++.+... ....+++.+... -.++|.++.
T Consensus       122 -~~~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS  165 (378)
T PLN00016        122 -VKSKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSS  165 (378)
T ss_pred             -HHhhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEcc
Confidence             3232233 8999999876432 245666666644 136887764

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=94.20  E-value=0.39  Score=43.70  Aligned_cols=68  Identities=18%  Similarity=0.272  Sum_probs=49.4

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCCh
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT  265 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~~  265 (371)
                      +|.|+|.|.+|...+..++..|. +|++.++++++.+.+.+.|.....   .   .+. +.+     ..+|+||-|+...
T Consensus         2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~~---~---~~~-~~~-----~~aDlVilavp~~   68 (279)
T PRK07417          2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDEA---S---TDL-SLL-----KDCDLVILALPIG   68 (279)
T ss_pred             eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCcccc---c---CCH-hHh-----cCCCEEEEcCCHH
Confidence            58899999999888777777798 899999999998888877742111   1   111 111     2689999998865


Q ss_pred             H
Q 017457          266 S  266 (371)
Q Consensus       266 ~  266 (371)
                      .
T Consensus        69 ~   69 (279)
T PRK07417         69 L   69 (279)
T ss_pred             H
Confidence            5

>PRK10258 biotin biosynthesis protein BioC; Provisional

Probab=94.19  E-value=1.8  Score=38.56  Aligned_cols=96  Identities=10%  Similarity=0.220  Sum_probs=61.7

Q ss_pred             CCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCc-ceEEcCCCCCCccHHHHHHHhhCCCcCEE
Q 017457          180 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI-TDFINPATCGDKTVSQVIKEMTDGGADYC  258 (371)
Q Consensus       180 ~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga-~~v~~~~~~~~~~~~~~i~~~~~gg~d~v  258 (371)
                      ...++.+||-+|+|. |..+..+++ .|. +|++++.+++..+.+++... ..++..+-   +++     .+..+.+|+|
T Consensus        39 ~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~~d~---~~~-----~~~~~~fD~V  107 (251)
T PRK10258         39 PQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLAGDI---ESL-----PLATATFDLA  107 (251)
T ss_pred             CccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEEcCc---ccC-----cCCCCcEEEE
Confidence            344678899999865 655555554 577 99999999998888876542 22221111   111     1122369999


Q ss_pred             EECCC-----C-hHHHHHHHHHhhcCCceEEEECc
Q 017457          259 FECIG-----L-TSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       259 id~~g-----~-~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      +....     . ...+..+.+.|+++ |.++....
T Consensus       108 ~s~~~l~~~~d~~~~l~~~~~~Lk~g-G~l~~~~~  141 (251)
T PRK10258        108 WSNLAVQWCGNLSTALRELYRVVRPG-GVVAFTTL  141 (251)
T ss_pred             EECchhhhcCCHHHHHHHHHHHcCCC-eEEEEEeC
Confidence            86432     1 23478889999998 99887643

>PRK09135 pteridine reductase; Provisional

Probab=94.18  E-value=0.38  Score=42.42  Aligned_cols=35  Identities=14%  Similarity=0.055  Sum_probs=30.1

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      .++++||+|+ |.+|...+..+...|+ +|++++++.
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~~   40 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHRS   40 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCC
Confidence            4678999998 9999998888888899 899988753

>TIGR02415 23BDH acetoin reductases

Probab=94.18  E-value=0.32  Score=43.16  Aligned_cols=77  Identities=18%  Similarity=0.218  Sum_probs=48.0

Q ss_pred             CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HHhCcc-eEE--cCCCCCCccHHHHHHHhhC--CC
Q 017457          185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT-DFI--NPATCGDKTVSQVIKEMTD--GG  254 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~-~v~--~~~~~~~~~~~~~i~~~~~--gg  254 (371)
                      +++||+|+ |++|...++.+...|+ +|+.+.+++++.+.+    ...+.. ..+  |-.+  .+...+.+.....  +.
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~~~   77 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD--KDQVFSAIDQAAEKFGG   77 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHcCC
Confidence            47899998 9999999988888999 899998876654433    222322 122  2222  1222222333322  26


Q ss_pred             cCEEEECCCC
Q 017457          255 ADYCFECIGL  264 (371)
Q Consensus       255 ~d~vid~~g~  264 (371)
                      +|+++++.|.
T Consensus        78 id~vi~~ag~   87 (254)
T TIGR02415        78 FDVMVNNAGV   87 (254)
T ss_pred             CCEEEECCCc
Confidence            8999998874

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=94.17  E-value=0.41  Score=45.41  Aligned_cols=35  Identities=17%  Similarity=0.263  Sum_probs=31.1

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  217 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~  217 (371)
                      .+.+|+|+|+|++|..++..+...|..+++.++..
T Consensus        40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            45689999999999999999999999899999864

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=94.15  E-value=0.23  Score=43.19  Aligned_cols=98  Identities=16%  Similarity=0.142  Sum_probs=61.4

Q ss_pred             HHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcce--EEcCCCCCCccHHHHHHH
Q 017457          176 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITD--FINPATCGDKTVSQVIKE  249 (371)
Q Consensus       176 ~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~--v~~~~~~~~~~~~~~i~~  249 (371)
                      ....+++++++||-+|+|. |..+..+++.. . +|+.++.+++..+.+++    .+...  +...+.      .+... 
T Consensus        71 ~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d~------~~~~~-  140 (212)
T PRK00312         71 TELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGDG------WKGWP-  140 (212)
T ss_pred             HHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCceEEEECCc------ccCCC-
Confidence            4456788999999998865 55555666654 3 89999998877665543    34332  222111      11000 


Q ss_pred             hhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEE
Q 017457          250 MTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL  285 (371)
Q Consensus       250 ~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~  285 (371)
                       ..+.||+|+....-......+.+.|+++ |+++..
T Consensus       141 -~~~~fD~I~~~~~~~~~~~~l~~~L~~g-G~lv~~  174 (212)
T PRK00312        141 -AYAPFDRILVTAAAPEIPRALLEQLKEG-GILVAP  174 (212)
T ss_pred             -cCCCcCEEEEccCchhhhHHHHHhcCCC-cEEEEE
Confidence             1137999885444444467788999998 987654

>TIGR00138 gidB 16S rRNA methyltransferase GidB

Probab=94.15  E-value=0.15  Score=43.13  Aligned_cols=92  Identities=17%  Similarity=0.198  Sum_probs=57.1

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcce--EEcCCCCCCccHHHHHHHhhCCCcC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD--FINPATCGDKTVSQVIKEMTDGGAD  256 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~~--v~~~~~~~~~~~~~~i~~~~~gg~d  256 (371)
                      ++++||=+|+|. |..++.+++.....+|++++.+++..+.++    +.+.+.  ++..      +..+ +  ...+.+|
T Consensus        42 ~~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~~------d~~~-~--~~~~~fD  111 (181)
T TIGR00138        42 DGKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNVEIVNG------RAED-F--QHEEQFD  111 (181)
T ss_pred             CCCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEec------chhh-c--cccCCcc
Confidence            378999998865 566666666553338999999987665543    345432  2221      2211 1  1123799


Q ss_pred             EEEECC-CC-hHHHHHHHHHhhcCCceEEEE
Q 017457          257 YCFECI-GL-TSVMNDAFNSSREGWGKTVIL  285 (371)
Q Consensus       257 ~vid~~-g~-~~~~~~~~~~l~~~~G~~v~~  285 (371)
                      +|+... .. +..++.+.+.|+++ |.++..
T Consensus       112 ~I~s~~~~~~~~~~~~~~~~Lkpg-G~lvi~  141 (181)
T TIGR00138       112 VITSRALASLNVLLELTLNLLKVG-GYFLAY  141 (181)
T ss_pred             EEEehhhhCHHHHHHHHHHhcCCC-CEEEEE
Confidence            998432 22 23456778889998 998866

GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.

>PLN02256 arogenate dehydrogenase

Probab=94.14  E-value=0.88  Score=41.98  Aligned_cols=97  Identities=12%  Similarity=0.148  Sum_probs=62.6

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCC
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGG  254 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg  254 (371)
                      +++...-..+.+|.|+|.|.+|...+..++..|. +|++.++++. .+.+.++|+.. .       .+..+.+    ...
T Consensus        27 ~~~~~~~~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv~~-~-------~~~~e~~----~~~   92 (304)
T PLN02256         27 LQEELEKSRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGVSF-F-------RDPDDFC----EEH   92 (304)
T ss_pred             HhHhhccCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCCee-e-------CCHHHHh----hCC
Confidence            4455555566789999999999988888888887 8999987764 35556677532 1       1222211    125


Q ss_pred             cCEEEECCCChHHHHHHHHH-----hhcCCceEEEECc
Q 017457          255 ADYCFECIGLTSVMNDAFNS-----SREGWGKTVILGV  287 (371)
Q Consensus       255 ~d~vid~~g~~~~~~~~~~~-----l~~~~G~~v~~g~  287 (371)
                      .|+|+-|+.... ....++.     ++++ ..+++++.
T Consensus        93 aDvVilavp~~~-~~~vl~~l~~~~l~~~-~iviDv~S  128 (304)
T PLN02256         93 PDVVLLCTSILS-TEAVLRSLPLQRLKRS-TLFVDVLS  128 (304)
T ss_pred             CCEEEEecCHHH-HHHHHHhhhhhccCCC-CEEEecCC
Confidence            789998888654 4443333     3454 56777765

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=94.12  E-value=0.57  Score=40.93  Aligned_cols=100  Identities=14%  Similarity=0.109  Sum_probs=60.1

Q ss_pred             CCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhCcceEE---------cCCCCCCccHHHHHHH
Q 017457          180 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFI---------NPATCGDKTVSQVIKE  249 (371)
Q Consensus       180 ~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga~~v~---------~~~~~~~~~~~~~i~~  249 (371)
                      .+.++.+||+.|+|. |.-++.||. .|+ .|++++.++...+.+. +.+.....         ....  ..-+...+.+
T Consensus        34 ~~~~~~rvL~~gCG~-G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~--v~~~~~D~~~  108 (218)
T PRK13255         34 ALPAGSRVLVPLCGK-SLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGE--ITIYCGDFFA  108 (218)
T ss_pred             CCCCCCeEEEeCCCC-hHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCc--eEEEECcccC
Confidence            456778999999876 677777765 799 9999999999888652 23321000         0000  0000011111


Q ss_pred             hh---CCCcCEEEECCC--------ChHHHHHHHHHhhcCCceEEEE
Q 017457          250 MT---DGGADYCFECIG--------LTSVMNDAFNSSREGWGKTVIL  285 (371)
Q Consensus       250 ~~---~gg~d~vid~~g--------~~~~~~~~~~~l~~~~G~~v~~  285 (371)
                      +.   .+.+|.|+|...        ....++.+.+.|+++ |+...+
T Consensus       109 l~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pg-G~~~l~  154 (218)
T PRK13255        109 LTAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAG-CRGLLV  154 (218)
T ss_pred             CCcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCC-CeEEEE
Confidence            11   126899998653        123478889999998 875543

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=94.09  E-value=0.35  Score=44.84  Aligned_cols=38  Identities=13%  Similarity=0.052  Sum_probs=31.6

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHH
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKF  221 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~  221 (371)
                      .|++|||+|+ |.+|...+..+...|+ +|+++.++.++.
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~   42 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTDR   42 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcch
Confidence            4789999998 9999999988888899 888877766543

>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB

Probab=94.07  E-value=0.56  Score=45.55  Aligned_cols=103  Identities=14%  Similarity=0.170  Sum_probs=63.6

Q ss_pred             HHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eE--EcCCCCCCccHHHHHHH
Q 017457          177 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DF--INPATCGDKTVSQVIKE  249 (371)
Q Consensus       177 ~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v--~~~~~~~~~~~~~~i~~  249 (371)
                      .....++|++||=+|+|+ |..++.+++.++..+|++++.++++++.+++    +|.. .+  .+.+.   .....   .
T Consensus       232 ~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~---~~~~~---~  304 (426)
T TIGR00563       232 TWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDG---RGPSQ---W  304 (426)
T ss_pred             HHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecccc---ccccc---c
Confidence            345678899999998755 4455566665552389999999998776643    5654 22  22211   11100   0


Q ss_pred             hhCCCcCEEE-E--CCCCh-------------------------HHHHHHHHHhhcCCceEEEECc
Q 017457          250 MTDGGADYCF-E--CIGLT-------------------------SVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       250 ~~~gg~d~vi-d--~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      ...+.||.|| |  |+|..                         ..+..+++.++++ |+++....
T Consensus       305 ~~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~Lkpg-G~lvystc  369 (426)
T TIGR00563       305 AENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTG-GTLVYATC  369 (426)
T ss_pred             ccccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEeC
Confidence            0122799997 4  44421                         2467788899998 99886643

The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=94.07  E-value=0.38  Score=43.01  Aligned_cols=80  Identities=23%  Similarity=0.189  Sum_probs=48.0

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC-hhHHHH----HHHhCcc-eEE--cCCCCCCccHHHHHHHhhC
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN-PEKFEI----GKKFGIT-DFI--NPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~-~~~~~~----~~~lga~-~v~--~~~~~~~~~~~~~i~~~~~  252 (371)
                      -+++++||+|+ |++|...++.+...|+ +|+++.++ ++..+.    ++..+.. .++  |-.+  .+...+.+.....
T Consensus         5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~-~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~   81 (261)
T PRK08936          5 LEGKVVVITGGSTGLGRAMAVRFGKEKA-KVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTV--ESDVVNLIQTAVK   81 (261)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCC--HHHHHHHHHHHHH
Confidence            35789999998 9999999999989999 77776653 333222    2223432 122  3222  1222222222222


Q ss_pred             --CCcCEEEECCCC
Q 017457          253 --GGADYCFECIGL  264 (371)
Q Consensus       253 --gg~d~vid~~g~  264 (371)
                        +.+|+++++.|.
T Consensus        82 ~~g~id~lv~~ag~   95 (261)
T PRK08936         82 EFGTLDVMINNAGI   95 (261)
T ss_pred             HcCCCCEEEECCCC
Confidence              378999988874

>PRK12746 short chain dehydrogenase; Provisional

Probab=94.05  E-value=0.44  Score=42.29  Aligned_cols=39  Identities=18%  Similarity=0.139  Sum_probs=30.7

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhHHH
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGV-DINPEKFE  222 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~-~~~~~~~~  222 (371)
                      .+++++|+|+ |++|...+..+...|+ +|++. .++.++.+
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~G~-~v~i~~~r~~~~~~   45 (254)
T PRK12746          5 DGKVALVTGASRGIGRAIAMRLANDGA-LVAIHYGRNKQAAD   45 (254)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHH
Confidence            3679999998 9999999998888899 77664 56665543

>PRK07201 short chain dehydrogenase; Provisional

Probab=94.05  E-value=0.26  Score=50.62  Aligned_cols=78  Identities=24%  Similarity=0.253  Sum_probs=51.2

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eEE--cCCCCCCccHHHHHHHhhC--C
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFI--NPATCGDKTVSQVIKEMTD--G  253 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~--~~~~~~~~~~~~~i~~~~~--g  253 (371)
                      ++++||+|+ |++|...+..+...|+ +|+++++++++.+.+.+    .+.. .++  |-.+  .++..+.+.+...  +
T Consensus       371 ~k~vlItGas~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~g  447 (657)
T PRK07201        371 GKVVLITGASSGIGRATAIKVAEAGA-TVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTD--SAAVDHTVKDILAEHG  447 (657)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHhcC
Confidence            678999998 9999999988888899 99999998877655422    2322 122  2222  1233333333322  3


Q ss_pred             CcCEEEECCCC
Q 017457          254 GADYCFECIGL  264 (371)
Q Consensus       254 g~d~vid~~g~  264 (371)
                      ++|+++++.|.
T Consensus       448 ~id~li~~Ag~  458 (657)
T PRK07201        448 HVDYLVNNAGR  458 (657)
T ss_pred             CCCEEEECCCC
Confidence            68999998873

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=94.03  E-value=0.31  Score=46.74  Aligned_cols=41  Identities=17%  Similarity=0.168  Sum_probs=34.7

Q ss_pred             cCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH
Q 017457          179 AGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK  220 (371)
Q Consensus       179 ~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~  220 (371)
                      .....+.+|||+|+ |.+|...+..+...|. +|++++++..+
T Consensus        55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~   96 (390)
T PLN02657         55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSG   96 (390)
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhh
Confidence            44567789999998 9999999999888999 89999887654

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=94.00  E-value=0.49  Score=47.70  Aligned_cols=76  Identities=12%  Similarity=0.163  Sum_probs=57.0

Q ss_pred             CeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCC
Q 017457          185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL  264 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~  264 (371)
                      ++++|.|.|.+|+..++.++..|. ++++++.++++.+.+++.|...+.-. -    .-.+.+++.--..+|.++-++++
T Consensus       418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~GD-~----~~~~~L~~a~i~~a~~viv~~~~  491 (558)
T PRK10669        418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLGN-A----ANEEIMQLAHLDCARWLLLTIPN  491 (558)
T ss_pred             CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEcC-C----CCHHHHHhcCccccCEEEEEcCC
Confidence            688999999999999999999999 89999999999999998887655432 2    12333443322278988877665


Q ss_pred             hH
Q 017457          265 TS  266 (371)
Q Consensus       265 ~~  266 (371)
                      ..
T Consensus       492 ~~  493 (558)
T PRK10669        492 GY  493 (558)
T ss_pred             hH
Confidence            43

>PTZ00079 NADP-specific glutamate dehydrogenase; Provisional

Probab=93.99  E-value=1.2  Score=43.06  Aligned_cols=35  Identities=29%  Similarity=0.240  Sum_probs=30.7

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEE-EEcCC
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKII-GVDIN  217 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi-~~~~~  217 (371)
                      -+|++|+|.|.|.+|..+++.+..+|+ +|+ +.+++
T Consensus       235 l~Gk~VaVqG~GnVg~~aa~~L~e~Ga-kVVavSD~~  270 (454)
T PTZ00079        235 LEGKTVVVSGSGNVAQYAVEKLLQLGA-KVLTMSDSD  270 (454)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEEcCC
Confidence            478999999999999999999999999 777 55555

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=93.99  E-value=0.26  Score=43.60  Aligned_cols=79  Identities=13%  Similarity=0.164  Sum_probs=46.6

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhH-HHHHH---HhCcceE---EcCCCCCCccHHHHHHHhhC-
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVD-INPEK-FEIGK---KFGITDF---INPATCGDKTVSQVIKEMTD-  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~-~~~~~-~~~~~---~lga~~v---~~~~~~~~~~~~~~i~~~~~-  252 (371)
                      +++++||+|+ |++|...++.+...|+ +|++.. ++..+ .+.+.   ..+....   .|-.+  .++..+.+.+... 
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   78 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGD--WDSTKAAFDKVKAE   78 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            4688999998 9999999999988999 676643 33332 22222   3343322   22222  1222222222221 


Q ss_pred             -CCcCEEEECCCC
Q 017457          253 -GGADYCFECIGL  264 (371)
Q Consensus       253 -gg~d~vid~~g~  264 (371)
                       +++|+++++.|.
T Consensus        79 ~~~id~li~~ag~   91 (246)
T PRK12938         79 VGEIDVLVNNAGI   91 (246)
T ss_pred             hCCCCEEEECCCC
Confidence             378999998874

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=93.95  E-value=0.22  Score=45.49  Aligned_cols=38  Identities=18%  Similarity=0.276  Sum_probs=31.6

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE  219 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~  219 (371)
                      .+++++||+|+|+.+.+++..+...|+++++++.++++
T Consensus       122 ~~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~~  159 (288)
T PRK12749        122 IKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDE  159 (288)
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence            36789999999999988777667789889999999853

>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated

Probab=93.91  E-value=0.42  Score=40.56  Aligned_cols=97  Identities=22%  Similarity=0.298  Sum_probs=61.8

Q ss_pred             HHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc--eEEcCCCCCCccHHHHHHHh
Q 017457          177 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIKEM  250 (371)
Q Consensus       177 ~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~--~v~~~~~~~~~~~~~~i~~~  250 (371)
                      ....+.++++||=+|+|. |..++.+++.....+|++++.+++..+.+++    .+..  .++..      +...   .+
T Consensus        25 ~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~------d~~~---~~   94 (187)
T PRK08287         25 SKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPG------EAPI---EL   94 (187)
T ss_pred             HhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEec------Cchh---hc
Confidence            445677889999888865 6667777776532389999999987776654    3332  22221      1111   11


Q ss_pred             hCCCcCEEEECCCC---hHHHHHHHHHhhcCCceEEEE
Q 017457          251 TDGGADYCFECIGL---TSVMNDAFNSSREGWGKTVIL  285 (371)
Q Consensus       251 ~~gg~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~  285 (371)
                       .+.+|+|+.....   ...+..+.+.|+++ |+++..
T Consensus        95 -~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~  130 (187)
T PRK08287         95 -PGKADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLT  130 (187)
T ss_pred             -CcCCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEE
Confidence             2379999854321   22467788999997 988764

>PF07021 MetW: Methionine biosynthesis protein MetW; InterPro: IPR010743 This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins

Probab=93.90  E-value=0.67  Score=39.29  Aligned_cols=70  Identities=24%  Similarity=0.377  Sum_probs=56.3

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEE
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCF  259 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vi  259 (371)
                      +++|.+||=+|+|. |.+...|.+..++ +.++++.++++...+.+-|.. |+.      .+..+.+....++.||+||
T Consensus        11 I~pgsrVLDLGCGd-G~LL~~L~~~k~v-~g~GvEid~~~v~~cv~rGv~-Viq------~Dld~gL~~f~d~sFD~VI   80 (193)
T PF07021_consen   11 IEPGSRVLDLGCGD-GELLAYLKDEKQV-DGYGVEIDPDNVAACVARGVS-VIQ------GDLDEGLADFPDQSFDYVI   80 (193)
T ss_pred             cCCCCEEEecCCCc-hHHHHHHHHhcCC-eEEEEecCHHHHHHHHHcCCC-EEE------CCHHHhHhhCCCCCccEEe
Confidence            78999999999975 6666667777899 999999999999988888876 443      3555567777666899998

Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalysed by the products of the metXW genes and is equivalent to the first step in enterobacteria, Gram-positive bacteria and fungi, except that in these microorganisms the reaction is catalysed by a single polypeptide (the product of the metA gene in Escherichia coli and the met5 gene product in Neurospora crassa). In P. putida, as in Gram-positive bacteria and certain fungi, the second and third steps are a direct sulphydrylation that converts the O-acyl-L-homoserine into homocysteine and further methylation to yield methionine. The latter reaction can be mediated by either of the two methionine synthetases present in the cells [].

>TIGR02992 ectoine_eutC ectoine utilization protein EutC

Probab=93.90  E-value=0.88  Score=42.46  Aligned_cols=103  Identities=17%  Similarity=0.167  Sum_probs=65.5

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHH-HcCCCeEEEEcCChhHHHHHH-Hh----CcceEEcCCCCCCccHHHHHHHhhCCCc
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGAR-LNRASKIIGVDINPEKFEIGK-KF----GITDFINPATCGDKTVSQVIKEMTDGGA  255 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~-~~g~~~Vi~~~~~~~~~~~~~-~l----ga~~v~~~~~~~~~~~~~~i~~~~~gg~  255 (371)
                      ...++++|+|+|..+.+.+..+. ..+.++|.+..++.++.+.+. ++    |.. +...     .+..+.+     ..+
T Consensus       127 ~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~-----~~~~~av-----~~a  195 (326)
T TIGR02992       127 EDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAA-----TDPRAAM-----SGA  195 (326)
T ss_pred             CCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEe-----CCHHHHh-----ccC
Confidence            45678999999999988877775 578778999999988866543 33    432 2111     1233233     269


Q ss_pred             CEEEECCCChHH-HHHHHHHhhcCCceEEEECccCCCCceecCHH
Q 017457          256 DYCFECIGLTSV-MNDAFNSSREGWGKTVILGVEMHGSPISLNSI  299 (371)
Q Consensus       256 d~vid~~g~~~~-~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~  299 (371)
                      |+|+.|++.... +.  .+.++++ -++..+|... ....+++..
T Consensus       196 DiVvtaT~s~~p~i~--~~~l~~g-~~i~~vg~~~-p~~rEld~~  236 (326)
T TIGR02992       196 DIIVTTTPSETPILH--AEWLEPG-QHVTAMGSDA-EHKNEIDPA  236 (326)
T ss_pred             CEEEEecCCCCcEec--HHHcCCC-cEEEeeCCCC-CCceecCHH
Confidence            999999886441 22  2347775 6777777632 223444444

Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=93.89  E-value=0.73  Score=42.13  Aligned_cols=38  Identities=18%  Similarity=0.285  Sum_probs=33.0

Q ss_pred             CeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHH
Q 017457          185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEI  223 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~  223 (371)
                      .+|.|+|+|.+|...++.+...|. .|+..+.+++..+.
T Consensus         6 ~~V~ViGaG~mG~~iA~~~a~~G~-~V~l~d~~~~~~~~   43 (286)
T PRK07819          6 QRVGVVGAGQMGAGIAEVCARAGV-DVLVFETTEELATA   43 (286)
T ss_pred             cEEEEEcccHHHHHHHHHHHhCCC-EEEEEECCHHHHHH
Confidence            479999999999887777777899 99999999988776

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=93.87  E-value=0.4  Score=44.20  Aligned_cols=75  Identities=17%  Similarity=0.241  Sum_probs=51.5

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHH---HHHHhC-cc---eEEcCCCCCCccHHHHHHHhhCCC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFE---IGKKFG-IT---DFINPATCGDKTVSQVIKEMTDGG  254 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~---~~~~lg-a~---~v~~~~~~~~~~~~~~i~~~~~gg  254 (371)
                      .+..|+|+|+ |-+|...+..+...|+ +|.++.|++++.+   .++++. +.   .++..+-.+...|.+.+.     |
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY-~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~-----g   78 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGY-TVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID-----G   78 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCC-EEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh-----C
Confidence            5789999998 9999999999999999 9999999887633   355554 22   222222111233443332     7


Q ss_pred             cCEEEECCC
Q 017457          255 ADYCFECIG  263 (371)
Q Consensus       255 ~d~vid~~g  263 (371)
                      .|.||.+..
T Consensus        79 cdgVfH~As   87 (327)
T KOG1502|consen   79 CDGVFHTAS   87 (327)
T ss_pred             CCEEEEeCc
Confidence            899997544

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=93.85  E-value=0.75  Score=42.18  Aligned_cols=67  Identities=19%  Similarity=0.220  Sum_probs=47.1

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCCh
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT  265 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~~  265 (371)
                      +|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|....        .++.+.+.     ..|+||.|+...
T Consensus         4 ~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~~~~--------~~~~e~~~-----~~d~vi~~vp~~   69 (296)
T PRK11559          4 KVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGAETA--------STAKAVAE-----QCDVIITMLPNS   69 (296)
T ss_pred             eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec--------CCHHHHHh-----cCCEEEEeCCCH
Confidence            68899999999887777777888 89999999988887776664211        12222221     467888777754


Q ss_pred             H
Q 017457          266 S  266 (371)
Q Consensus       266 ~  266 (371)
                      .
T Consensus        70 ~   70 (296)
T PRK11559         70 P   70 (296)
T ss_pred             H
Confidence            4

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=93.85  E-value=0.83  Score=42.60  Aligned_cols=95  Identities=16%  Similarity=0.082  Sum_probs=64.1

Q ss_pred             CeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceE-EcCCC----C-CCccHHHHHHHhhCCCcCEE
Q 017457          185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPAT----C-GDKTVSQVIKEMTDGGADYC  258 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v-~~~~~----~-~~~~~~~~i~~~~~gg~d~v  258 (371)
                      -+|.|+|+|.+|.+.+..+...|. .|++.++++++.+.+...+.... ++...    . ...+..+.+     ..+|+|
T Consensus         5 m~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~-----~~aD~V   78 (328)
T PRK14618          5 MRVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEAL-----AGADFA   78 (328)
T ss_pred             CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHH-----cCCCEE
Confidence            469999999999999888888898 89999998888777765421100 00000    0 001222221     268999


Q ss_pred             EECCCChHHHHHHHHHhhcCCceEEEECc
Q 017457          259 FECIGLTSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       259 id~~g~~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      +-++.... ....++.++++ -.++.+..
T Consensus        79 i~~v~~~~-~~~v~~~l~~~-~~vi~~~~  105 (328)
T PRK14618         79 VVAVPSKA-LRETLAGLPRA-LGYVSCAK  105 (328)
T ss_pred             EEECchHH-HHHHHHhcCcC-CEEEEEee
Confidence            99999887 78888888875 66666643

>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional

Probab=93.84  E-value=0.37  Score=43.48  Aligned_cols=104  Identities=16%  Similarity=0.169  Sum_probs=65.9

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCc--ceEEcCCCCCCccHHHHHHHhhC
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI--TDFINPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga--~~v~~~~~~~~~~~~~~i~~~~~  252 (371)
                      +....++.++.+||=+|+|. |..+..+++..++ +|++++.+++..+.+++.-.  ..+ ....   .+..+  ..+..
T Consensus        44 ~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i-~~~~---~D~~~--~~~~~  115 (263)
T PTZ00098         44 ILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKI-EFEA---NDILK--KDFPE  115 (263)
T ss_pred             HHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCce-EEEE---CCccc--CCCCC
Confidence            44556789999999999864 5556677777788 99999999988777765321  111 0000   11110  01112


Q ss_pred             CCcCEEEEC--C---C--C-hHHHHHHHHHhhcCCceEEEECc
Q 017457          253 GGADYCFEC--I---G--L-TSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       253 gg~d~vid~--~---g--~-~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      +.||+|+..  .   +  . ...++.+.+.|+|+ |+++....
T Consensus       116 ~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPG-G~lvi~d~  157 (263)
T PTZ00098        116 NTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPN-GILLITDY  157 (263)
T ss_pred             CCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence            379999852  1   1  1 23467888999998 99887654

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=93.84  E-value=0.46  Score=41.89  Aligned_cols=77  Identities=12%  Similarity=0.040  Sum_probs=46.6

Q ss_pred             CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhHHHHH----HHhCcc-eEE--cCCCCCCccHHHHHHHhh--CC
Q 017457          185 STVAIFGL-GAVGLAVAEGARLNRASKIIGV-DINPEKFEIG----KKFGIT-DFI--NPATCGDKTVSQVIKEMT--DG  253 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~-~~~~~~~~~~----~~lga~-~v~--~~~~~~~~~~~~~i~~~~--~g  253 (371)
                      +++||+|+ |++|...+..+...|+ +|+++ .+++++.+..    +..+.. .++  |-.+  .+...+.+.+..  .+
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~i~~~~~~~~~~~~   78 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGY-TVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISD--ENQVVAMFTAIDQHDE   78 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCC--HHHHHHHHHHHHHhCC
Confidence            47899998 9999999988888899 77664 5555544322    223322 222  2222  123333333332  23


Q ss_pred             CcCEEEECCCC
Q 017457          254 GADYCFECIGL  264 (371)
Q Consensus       254 g~d~vid~~g~  264 (371)
                      ++|+++++.|.
T Consensus        79 ~id~vi~~ag~   89 (247)
T PRK09730         79 PLAALVNNAGI   89 (247)
T ss_pred             CCCEEEECCCC
Confidence            78999998874

>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating)

Probab=93.83  E-value=0.65  Score=42.28  Aligned_cols=87  Identities=23%  Similarity=0.356  Sum_probs=55.9

Q ss_pred             eEEEEcCChHHHHH-HHHHHHcCCCeEEE-EcCChhH--HHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          186 TVAIFGLGAVGLAV-AEGARLNRASKIIG-VDINPEK--FEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       186 ~VLI~G~g~~G~~a-i~la~~~g~~~Vi~-~~~~~~~--~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      +|.|+|+|.+|... ..+.+..+. ++.. ++.++++  ++.++++|.....+       ++...+.   ...+|+|+++
T Consensus         3 rVAIIG~G~IG~~h~~~ll~~~~~-elvaV~d~d~es~~la~A~~~Gi~~~~~-------~~e~ll~---~~dIDaV~ia   71 (285)
T TIGR03215         3 KVAIIGSGNIGTDLMYKLLRSEHL-EMVAMVGIDPESDGLARARELGVKTSAE-------GVDGLLA---NPDIDIVFDA   71 (285)
T ss_pred             EEEEEeCcHHHHHHHHHHHhCCCc-EEEEEEeCCcccHHHHHHHHCCCCEEEC-------CHHHHhc---CCCCCEEEEC
Confidence            58899999999865 555555567 5554 4445543  45677788654432       2222222   1279999999


Q ss_pred             CCChHHHHHHHHHhhcCCceEEEE
Q 017457          262 IGLTSVMNDAFNSSREGWGKTVIL  285 (371)
Q Consensus       262 ~g~~~~~~~~~~~l~~~~G~~v~~  285 (371)
                      ++.....+.+..++..  |.-+..
T Consensus        72 Tp~~~H~e~a~~al~a--Gk~VId   93 (285)
T TIGR03215        72 TSAKAHARHARLLAEL--GKIVID   93 (285)
T ss_pred             CCcHHHHHHHHHHHHc--CCEEEE
Confidence            9998877777777776  444443

Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.82  E-value=0.42  Score=43.37  Aligned_cols=94  Identities=16%  Similarity=0.229  Sum_probs=65.5

Q ss_pred             ccccchhhhHHHHHHHcC-CCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCC
Q 017457          163 LLSCGVSTGVGAAWKVAG-VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD  240 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~-~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~  240 (371)
                      ..||+...... +.+..+ --.|++|+|+|. ..+|.-.+.++...|+ +|++..+.                   +   
T Consensus       137 ~~PcTp~aii~-lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~a-tVt~~hs~-------------------t---  192 (285)
T PRK14189        137 FRPCTPYGVMK-MLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGA-TVTICHSK-------------------T---  192 (285)
T ss_pred             CcCCCHHHHHH-HHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEecCC-------------------C---
Confidence            35655554444 334444 347999999998 5669999999999999 88875422                   1   


Q ss_pred             ccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECcc
Q 017457          241 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       241 ~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      .++.+.++     .+|+|+-++|.+..+..  +.++++ ..++++|..
T Consensus       193 ~~l~~~~~-----~ADIVV~avG~~~~i~~--~~ik~g-avVIDVGin  232 (285)
T PRK14189        193 RDLAAHTR-----QADIVVAAVGKRNVLTA--DMVKPG-ATVIDVGMN  232 (285)
T ss_pred             CCHHHHhh-----hCCEEEEcCCCcCccCH--HHcCCC-CEEEEcccc
Confidence            23332222     58999999998774443  789997 899999964

>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase

Probab=93.78  E-value=1.3  Score=40.05  Aligned_cols=100  Identities=14%  Similarity=0.182  Sum_probs=61.6

Q ss_pred             cCCCCCCeEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHHHHHHhhCC
Q 017457          179 AGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTDG  253 (371)
Q Consensus       179 ~~~~~g~~VLI~G~g~~G~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~~~g  253 (371)
                      ..+++|++||=+|+|+ |..++.++..++ ...|++++.++++.+.+++    +|...+.-...    +.. .+.. ..+
T Consensus        67 l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~----D~~-~~~~-~~~  139 (264)
T TIGR00446        67 LEPDPPERVLDMAAAP-GGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAVTNF----DGR-VFGA-AVP  139 (264)
T ss_pred             hCCCCcCEEEEECCCc-hHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEecC----CHH-Hhhh-hcc
Confidence            4578899998888765 555555666553 2389999999998776643    56543211111    211 1111 122


Q ss_pred             CcCEEE-E--CCCC-------------------------hHHHHHHHHHhhcCCceEEEEC
Q 017457          254 GADYCF-E--CIGL-------------------------TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       254 g~d~vi-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      .||.|+ |  |+|.                         ...+..+++.++++ |+++...
T Consensus       140 ~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpg-G~lvYst  199 (264)
T TIGR00446       140 KFDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPG-GVLVYST  199 (264)
T ss_pred             CCCEEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEe
Confidence            699997 4  4443                         11467888899998 9887554

>PRK08300 acetaldehyde dehydrogenase; Validated

Probab=93.76  E-value=0.82  Score=41.87  Aligned_cols=94  Identities=18%  Similarity=0.246  Sum_probs=56.0

Q ss_pred             CeEEEEcCChHHHHHH-HHHHHcCCCeEEEEcCChh--HHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          185 STVAIFGLGAVGLAVA-EGARLNRASKIIGVDINPE--KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai-~la~~~g~~~Vi~~~~~~~--~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      -+|.|+|.|.+|...+ .+.+.-+..-+.+++.+++  .+++++++|.....       .++...+.+..-..+|+||++
T Consensus         5 lrVAIIGtG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~~Gi~~~~-------~~ie~LL~~~~~~dIDiVf~A   77 (302)
T PRK08300          5 LKVAIIGSGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARRLGVATSA-------EGIDGLLAMPEFDDIDIVFDA   77 (302)
T ss_pred             CeEEEEcCcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHHcCCCccc-------CCHHHHHhCcCCCCCCEEEEC
Confidence            4689999999998744 4444446633334445544  34567778864332       123222321000269999999


Q ss_pred             CCChHHHHHHHHHhhcCCceEEEEC
Q 017457          262 IGLTSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       262 ~g~~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      ++.....+.+...+..+ -++++..
T Consensus        78 T~a~~H~e~a~~a~eaG-k~VID~s  101 (302)
T PRK08300         78 TSAGAHVRHAAKLREAG-IRAIDLT  101 (302)
T ss_pred             CCHHHHHHHHHHHHHcC-CeEEECC
Confidence            99887666666666664 4555544

>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed

Probab=93.75  E-value=0.51  Score=40.72  Aligned_cols=96  Identities=19%  Similarity=0.253  Sum_probs=62.6

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcce--EEcCCCCCCccHHHHHHHhh-CCCc
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITD--FINPATCGDKTVSQVIKEMT-DGGA  255 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~--v~~~~~~~~~~~~~~i~~~~-~gg~  255 (371)
                      ++.+||-+|+|. |..+..+++.....+|++++.+++..+.+++    .+...  ++.      .+..+.+.... .+.+
T Consensus        40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~~~~------~d~~~~l~~~~~~~~~  112 (202)
T PRK00121         40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLRLLC------GDAVEVLLDMFPDGSL  112 (202)
T ss_pred             CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEEEEe------cCHHHHHHHHcCcccc
Confidence            667889999876 7777778876543389999999988887754    23222  222      23322333222 3378


Q ss_pred             CEEEECCC--------------ChHHHHHHHHHhhcCCceEEEEC
Q 017457          256 DYCFECIG--------------LTSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       256 d~vid~~g--------------~~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      |.|+-...              ....++.+.+.|+++ |.++...
T Consensus       113 D~V~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~l~i~~  156 (202)
T PRK00121        113 DRIYLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPG-GEIHFAT  156 (202)
T ss_pred             ceEEEECCCCCCCccccccccCCHHHHHHHHHHcCCC-CEEEEEc
Confidence            98874322              133578899999998 9988764

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.74  E-value=0.43  Score=42.40  Aligned_cols=78  Identities=15%  Similarity=0.202  Sum_probs=46.4

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hHHHH----HHHhCcc-eEE--cCCCCCCccHHHHHHHhhC--
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP-EKFEI----GKKFGIT-DFI--NPATCGDKTVSQVIKEMTD--  252 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~-~~~~~----~~~lga~-~v~--~~~~~~~~~~~~~i~~~~~--  252 (371)
                      .+++||+|+ |++|...+..+...|+ +|++++++. ++.+.    ++..+.. .++  |..+  ..+..+.+.....  
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   78 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGF-DLAINDRPDDEELAATQQELRALGVEVIFFPADVAD--LSAHEAMLDAAQAAW   78 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHhc
Confidence            367999998 9999999988888899 888887653 22221    2222322 222  2222  1223333333322  


Q ss_pred             CCcCEEEECCCC
Q 017457          253 GGADYCFECIGL  264 (371)
Q Consensus       253 gg~d~vid~~g~  264 (371)
                      +.+|+++.+.|.
T Consensus        79 ~~id~vi~~ag~   90 (256)
T PRK12745         79 GRIDCLVNNAGV   90 (256)
T ss_pred             CCCCEEEECCcc
Confidence            368999998763

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=93.74  E-value=0.73  Score=43.06  Aligned_cols=86  Identities=27%  Similarity=0.195  Sum_probs=56.7

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  262 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~  262 (371)
                      .|.+|.|+|.|.+|...+..++..|. +|++.+++++.....    ..    ..    .++.+.+.     ..|+|+-+.
T Consensus       145 ~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~~~~~----~~----~~----~~l~ell~-----~aDiVil~l  206 (330)
T PRK12480        145 KNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNKDLDF----LT----YK----DSVKEAIK-----DADIISLHV  206 (330)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhHhhhh----hh----cc----CCHHHHHh-----cCCEEEEeC
Confidence            67799999999999999999999999 999999876543211    00    00    12222221     578888777


Q ss_pred             CChH-----HHHHHHHHhhcCCceEEEECc
Q 017457          263 GLTS-----VMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       263 g~~~-----~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      +...     .....+..++++ ..+|..+.
T Consensus       207 P~t~~t~~li~~~~l~~mk~g-avlIN~aR  235 (330)
T PRK12480        207 PANKESYHLFDKAMFDHVKKG-AILVNAAR  235 (330)
T ss_pred             CCcHHHHHHHhHHHHhcCCCC-cEEEEcCC
Confidence            7432     123555667775 67776653

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.74  E-value=0.49  Score=42.88  Aligned_cols=94  Identities=15%  Similarity=0.208  Sum_probs=65.9

Q ss_pred             ccccchhhhHHHHHHHcCC-CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCC
Q 017457          163 LLSCGVSTGVGAAWKVAGV-EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD  240 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~-~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~  240 (371)
                      ..||+....+. +.+..++ -.|++|+|+|- ..+|.-.+.+++..|+ .|++..+..                      
T Consensus       138 ~~PcTp~av~~-ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~a-tVtv~hs~T----------------------  193 (285)
T PRK10792        138 LRPCTPRGIMT-LLERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGC-TVTVCHRFT----------------------  193 (285)
T ss_pred             CCCCCHHHHHH-HHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCC-eEEEEECCC----------------------
Confidence            35665555554 3344443 46999999997 5699999999999999 888876431                      


Q ss_pred             ccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECcc
Q 017457          241 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       241 ~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      .++.+.++     .+|+++.++|.+..+.  -+.++++ ..++++|..
T Consensus       194 ~~l~~~~~-----~ADIvi~avG~p~~v~--~~~vk~g-avVIDvGin  233 (285)
T PRK10792        194 KNLRHHVR-----NADLLVVAVGKPGFIP--GEWIKPG-AIVIDVGIN  233 (285)
T ss_pred             CCHHHHHh-----hCCEEEEcCCCccccc--HHHcCCC-cEEEEcccc
Confidence            22322222     5899999999887433  2678887 899999964

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=93.73  E-value=0.78  Score=42.34  Aligned_cols=89  Identities=22%  Similarity=0.310  Sum_probs=60.1

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      .-.|++|.|+|-|.+|.+.++.++..|. +|++..+.....+.+...|+. +.        ++.+.+.     ..|+|+-
T Consensus        13 ~LkgKtVGIIG~GsIG~amA~nL~d~G~-~ViV~~r~~~s~~~A~~~G~~-v~--------sl~Eaak-----~ADVV~l   77 (335)
T PRK13403         13 LLQGKTVAVIGYGSQGHAQAQNLRDSGV-EVVVGVRPGKSFEVAKADGFE-VM--------SVSEAVR-----TAQVVQM   77 (335)
T ss_pred             hhCcCEEEEEeEcHHHHHHHHHHHHCcC-EEEEEECcchhhHHHHHcCCE-EC--------CHHHHHh-----cCCEEEE
Confidence            4568999999999999999999999999 888876555455556666653 21        2222222     5899998


Q ss_pred             CCCChHH---H-HHHHHHhhcCCceEEEEC
Q 017457          261 CIGLTSV---M-NDAFNSSREGWGKTVILG  286 (371)
Q Consensus       261 ~~g~~~~---~-~~~~~~l~~~~G~~v~~g  286 (371)
                      +.+.+..   + ...+..|++  |.++.++
T Consensus        78 lLPd~~t~~V~~~eil~~MK~--GaiL~f~  105 (335)
T PRK13403         78 LLPDEQQAHVYKAEVEENLRE--GQMLLFS  105 (335)
T ss_pred             eCCChHHHHHHHHHHHhcCCC--CCEEEEC
Confidence            8876442   2 235556666  4555554

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=93.69  E-value=0.56  Score=47.86  Aligned_cols=77  Identities=22%  Similarity=0.298  Sum_probs=58.6

Q ss_pred             CCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCC
Q 017457          184 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG  263 (371)
Q Consensus       184 g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g  263 (371)
                      .++|+|.|.|.+|+..++.++..|. ++++++.++++.+.+++.|.+.++ .+.    .-.+.+++.--..+|.++-+++
T Consensus       400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~-GDa----t~~~~L~~agi~~A~~vvv~~~  473 (621)
T PRK03562        400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFY-GDA----TRMDLLESAGAAKAEVLINAID  473 (621)
T ss_pred             cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEE-EeC----CCHHHHHhcCCCcCCEEEEEeC
Confidence            3689999999999999999999999 899999999999999988875443 222    1123333332227899998888


Q ss_pred             ChH
Q 017457          264 LTS  266 (371)
Q Consensus       264 ~~~  266 (371)
                      +..
T Consensus       474 d~~  476 (621)
T PRK03562        474 DPQ  476 (621)
T ss_pred             CHH
Confidence            755

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=93.67  E-value=0.39  Score=44.54  Aligned_cols=38  Identities=16%  Similarity=0.146  Sum_probs=31.7

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHH
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKF  221 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~  221 (371)
                      .+++|||+|+ |.+|...+..+...|+ +|+++.++.++.
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~-~V~~~~r~~~~~   42 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGY-TINATVRDPKDR   42 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCC-EEEEEEcCCcch
Confidence            4789999998 9999999999888999 888877665543

>TIGR00417 speE spermidine synthase

Probab=93.66  E-value=0.74  Score=41.69  Aligned_cols=102  Identities=19%  Similarity=0.161  Sum_probs=59.7

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhC-c-ceEEcCCCC--CCccHHHHHHHhhCCCcCE
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG-I-TDFINPATC--GDKTVSQVIKEMTDGGADY  257 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lg-a-~~v~~~~~~--~~~~~~~~i~~~~~gg~d~  257 (371)
                      ..+++||++|+|. |..+..+++.....++++++.+++-.+.+++.- . ...++..+.  ...+..+.+.+ ..+.+|+
T Consensus        71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D~~~~l~~-~~~~yDv  148 (270)
T TIGR00417        71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDDGFKFLAD-TENTFDV  148 (270)
T ss_pred             CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECchHHHHHh-CCCCccE
Confidence            4456999998865 445556666665558999999887767666521 0 000100000  00233333332 2348999


Q ss_pred             EE-ECC---C------ChHHHHHHHHHhhcCCceEEEEC
Q 017457          258 CF-ECI---G------LTSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       258 vi-d~~---g------~~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      |+ |..   +      ....++.+.+.|+++ |.++...
T Consensus       149 Ii~D~~~~~~~~~~l~~~ef~~~~~~~L~pg-G~lv~~~  186 (270)
T TIGR00417       149 IIVDSTDPVGPAETLFTKEFYELLKKALNED-GIFVAQS  186 (270)
T ss_pred             EEEeCCCCCCcccchhHHHHHHHHHHHhCCC-cEEEEcC
Confidence            97 443   1      123357888999998 9988764

the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.

>PRK07069 short chain dehydrogenase; Validated

Probab=93.59  E-value=0.35  Score=42.83  Aligned_cols=76  Identities=21%  Similarity=0.265  Sum_probs=46.6

Q ss_pred             eEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC-hhHHHHHHH-h----Ccc--eEE--cCCCCCCccHHHHHHHhhC--
Q 017457          186 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN-PEKFEIGKK-F----GIT--DFI--NPATCGDKTVSQVIKEMTD--  252 (371)
Q Consensus       186 ~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~-~~~~~~~~~-l----ga~--~v~--~~~~~~~~~~~~~i~~~~~--  252 (371)
                      ++||+|+ |++|...++.+...|+ +|++++++ .++.+.+.+ +    +..  ..+  |-.+  .+.+.+.+.+...  
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   77 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGA-KVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTD--EAQWQALLAQAADAM   77 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCC--HHHHHHHHHHHHHHc
Confidence            3789987 9999998888888899 89999877 555444322 2    111  111  3222  1233333333222  


Q ss_pred             CCcCEEEECCCC
Q 017457          253 GGADYCFECIGL  264 (371)
Q Consensus       253 gg~d~vid~~g~  264 (371)
                      +++|+++.+.|.
T Consensus        78 ~~id~vi~~ag~   89 (251)
T PRK07069         78 GGLSVLVNNAGV   89 (251)
T ss_pred             CCccEEEECCCc
Confidence            378999998873

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.57  E-value=0.45  Score=42.54  Aligned_cols=79  Identities=15%  Similarity=0.272  Sum_probs=47.8

Q ss_pred             CCCeEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCCh--hHHHHH-HHhCcc-eE--EcCCCCCCccHHHHHHHhhC-
Q 017457          183 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINP--EKFEIG-KKFGIT-DF--INPATCGDKTVSQVIKEMTD-  252 (371)
Q Consensus       183 ~g~~VLI~G~---g~~G~~ai~la~~~g~~~Vi~~~~~~--~~~~~~-~~lga~-~v--~~~~~~~~~~~~~~i~~~~~-  252 (371)
                      .++++||+|+   +++|.+.+..+...|+ +|+.++++.  +..+.+ .+++.. ..  .|-.+  .++..+.+.+... 
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~i~~~~~~~~~~   82 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQGA-EVVLTGFGRALRLTERIAKRLPEPAPVLELDVTN--EEHLASLADRVREH   82 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHCCC-EEEEecCccchhHHHHHHHhcCCCCcEEeCCCCC--HHHHHHHHHHHHHH
Confidence            5789999985   6999999888888999 899887653  333333 334321 12  22222  1223333333222 


Q ss_pred             -CCcCEEEECCCC
Q 017457          253 -GGADYCFECIGL  264 (371)
Q Consensus       253 -gg~d~vid~~g~  264 (371)
                       +++|+++++.|.
T Consensus        83 ~g~iD~li~nAG~   95 (256)
T PRK07889         83 VDGLDGVVHSIGF   95 (256)
T ss_pred             cCCCcEEEEcccc
Confidence             379999987763

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=93.57  E-value=0.6  Score=38.48  Aligned_cols=85  Identities=13%  Similarity=0.090  Sum_probs=55.7

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCc------ceEEcCCCCCCccHHHHHHHhhCCCcCEEE
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI------TDFINPATCGDKTVSQVIKEMTDGGADYCF  259 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga------~~v~~~~~~~~~~~~~~i~~~~~gg~d~vi  259 (371)
                      +|.|+|+|..|.+.+..+...|. +|+.-.++++..+.+++-+.      ...+...-.-..++.+.++     +.|+++
T Consensus         1 KI~ViGaG~~G~AlA~~la~~g~-~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~-----~ad~Ii   74 (157)
T PF01210_consen    1 KIAVIGAGNWGTALAALLADNGH-EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALE-----DADIII   74 (157)
T ss_dssp             EEEEESSSHHHHHHHHHHHHCTE-EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHT-----T-SEEE
T ss_pred             CEEEECcCHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhC-----cccEEE
Confidence            58899999999999999999998 99999999988777765322      0001000000123433332     689999


Q ss_pred             ECCCChHHHHHHHHHhhc
Q 017457          260 ECIGLTSVMNDAFNSSRE  277 (371)
Q Consensus       260 d~~g~~~~~~~~~~~l~~  277 (371)
                      -+++... .+..++.+.+
T Consensus        75 iavPs~~-~~~~~~~l~~   91 (157)
T PF01210_consen   75 IAVPSQA-HREVLEQLAP   91 (157)
T ss_dssp             E-S-GGG-HHHHHHHHTT
T ss_pred             ecccHHH-HHHHHHHHhh
Confidence            9998766 6667776666

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PF01564 Spermine_synth: Spermine/spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (2

Probab=93.57  E-value=0.42  Score=42.66  Aligned_cols=97  Identities=20%  Similarity=0.204  Sum_probs=61.7

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh-Cc---------ceEEcCCCCCCccHHHHHHHhh
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GI---------TDFINPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l-ga---------~~v~~~~~~~~~~~~~~i~~~~  251 (371)
                      .+.++|||+|+|. |..+-.+++.-...+|.+++.+++=.+.++++ +.         -+++.      .+-...+++..
T Consensus        75 ~~p~~VLiiGgG~-G~~~~ell~~~~~~~i~~VEiD~~Vv~~a~~~f~~~~~~~~d~r~~i~~------~Dg~~~l~~~~  147 (246)
T PF01564_consen   75 PNPKRVLIIGGGD-GGTARELLKHPPVESITVVEIDPEVVELARKYFPEFSEGLDDPRVRIII------GDGRKFLKETQ  147 (246)
T ss_dssp             SST-EEEEEESTT-SHHHHHHTTSTT-SEEEEEES-HHHHHHHHHHTHHHHTTGGSTTEEEEE------STHHHHHHTSS
T ss_pred             CCcCceEEEcCCC-hhhhhhhhhcCCcceEEEEecChHHHHHHHHhchhhccccCCCceEEEE------hhhHHHHHhcc
Confidence            4689999998755 55555777776666999999998877777763 21         12332      34444454433


Q ss_pred             CCCcCEEE-ECCC---------ChHHHHHHHHHhhcCCceEEEEC
Q 017457          252 DGGADYCF-ECIG---------LTSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       252 ~gg~d~vi-d~~g---------~~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      .+.+|+++ |...         +...++.+.++|+++ |.++.-.
T Consensus       148 ~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~~-Gv~v~~~  191 (246)
T PF01564_consen  148 EEKYDVIIVDLTDPDGPAPNLFTREFYQLCKRRLKPD-GVLVLQA  191 (246)
T ss_dssp             ST-EEEEEEESSSTTSCGGGGSSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CCcccEEEEeCCCCCCCcccccCHHHHHHHHhhcCCC-cEEEEEc
Confidence            22799997 6554         124478889999997 9887654

5.1.16 from EC), spermine synthase (2.5.1.22 from EC) and putrescine N-methyltransferase (2.1.1.53 from EC) []. The Thermotoga maritima spermidine synthase monomer consists of two domains: an N-terminal domain composed of six beta-strands, and a Rossmann-like C- terminal domain []. The larger C-terminal catalytic core domain consists of a seven-stranded beta-sheet flanked by nine alpha helices. This domain resembles a topology observed in a number of nucleotide and dinucleotide-binding enzymes, and in S-adenosyl-L-methionine (AdoMet)- dependent methyltransferase (MTases) [].; GO: 0003824 catalytic activity; PDB: 2E5W_C 2ZSU_E 2O0L_B 2O05_B 2O06_B 2O07_B 3RW9_B 2PWP_A 2HTE_B 3RIE_B ....

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=93.55  E-value=0.35  Score=44.71  Aligned_cols=37  Identities=14%  Similarity=0.143  Sum_probs=31.4

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK  220 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~  220 (371)
                      .+++|||+|+ |.+|...+..+...|. +|+++.++.++
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~-~V~~~~r~~~~   40 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGY-TVKATVRDPND   40 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCC-EEEEEEcCCCc
Confidence            3678999997 9999999999988999 89888776544

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.55  E-value=0.44  Score=41.92  Aligned_cols=78  Identities=15%  Similarity=0.174  Sum_probs=45.5

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC-hhHHHHHH----HhCcc-eEE--cCCCCCCccHHHHHHHhhC-
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN-PEKFEIGK----KFGIT-DFI--NPATCGDKTVSQVIKEMTD-  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~-~~~~~~~~----~lga~-~v~--~~~~~~~~~~~~~i~~~~~-  252 (371)
                      +.++|||+|+ |.+|...+..+...|+ +|+++.++ .+..+.+.    ..+.. +++  |..+  ...+.+.+.+... 
T Consensus         5 ~~~~vlItGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~   81 (249)
T PRK12825          5 MGRVALVTGAARGLGRAIALRLARAGA-DVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTD--KAALEAAVAAAVER   81 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCC--HHHHHHHHHHHHHH
Confidence            3578999998 9999999999988999 66665544 33333222    22322 222  2222  1222222222211 


Q ss_pred             -CCcCEEEECCC
Q 017457          253 -GGADYCFECIG  263 (371)
Q Consensus       253 -gg~d~vid~~g  263 (371)
                       +++|.++++.|
T Consensus        82 ~~~id~vi~~ag   93 (249)
T PRK12825         82 FGRIDILVNNAG   93 (249)
T ss_pred             cCCCCEEEECCc
Confidence             37899999887

>TIGR00452 methyltransferase, putative

Probab=93.54  E-value=0.45  Score=44.05  Aligned_cols=97  Identities=14%  Similarity=0.075  Sum_probs=60.1

Q ss_pred             HHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHH---HHHh-Cc---ceEEcCCCCCCccHHHHHH
Q 017457          176 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEI---GKKF-GI---TDFINPATCGDKTVSQVIK  248 (371)
Q Consensus       176 ~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~---~~~l-ga---~~v~~~~~~~~~~~~~~i~  248 (371)
                      .......+|++||=+|+|. |..+..+++ .|+..|++++.++.-...   +++. +.   .++..      .+    +.
T Consensus       114 l~~l~~~~g~~VLDvGCG~-G~~~~~~~~-~g~~~v~GiDpS~~ml~q~~~~~~~~~~~~~v~~~~------~~----ie  181 (314)
T TIGR00452       114 LPHLSPLKGRTILDVGCGS-GYHMWRMLG-HGAKSLVGIDPTVLFLCQFEAVRKLLDNDKRAILEP------LG----IE  181 (314)
T ss_pred             HHhcCCCCCCEEEEeccCC-cHHHHHHHH-cCCCEEEEEcCCHHHHHHHHHHHHHhccCCCeEEEE------CC----HH
Confidence            3344567789999999876 666666665 476589999998865433   2222 21   12221      11    12


Q ss_pred             HhhCC-CcCEEEECC-----CCh-HHHHHHHHHhhcCCceEEEE
Q 017457          249 EMTDG-GADYCFECI-----GLT-SVMNDAFNSSREGWGKTVIL  285 (371)
Q Consensus       249 ~~~~g-g~d~vid~~-----g~~-~~~~~~~~~l~~~~G~~v~~  285 (371)
                      ++... .||+|+...     .++ ..+..+.+.|+++ |+++.-
T Consensus       182 ~lp~~~~FD~V~s~gvL~H~~dp~~~L~el~r~LkpG-G~Lvle  224 (314)
T TIGR00452       182 QLHELYAFDTVFSMGVLYHRKSPLEHLKQLKHQLVIK-GELVLE  224 (314)
T ss_pred             HCCCCCCcCEEEEcchhhccCCHHHHHHHHHHhcCCC-CEEEEE
Confidence            22222 799998542     122 3588999999998 998864

Known examples to date are restricted to the proteobacteria.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	371
3uko_A	378	Crystal Structure Of S-Nitrosoglutathione Reductase		3e-74
4dl9_A	396	Crystal Structure Of S-nitrosoglutathione Reductase		2e-72
3qj5_A	374	S-Nitrosoglutathione Reductase (Gsnor) In Complex W		4e-64
1teh_A	373	Structure Of Human Liver Chichi Alcohol Dehydrogena		5e-64
1mc5_A	374	Ternary Complex Of Human Glutathione-Dependent Form		5e-64
2fzw_A	373	Structure Of The Binary Complex Of The E67l Mutant		5e-64
1cdo_A	374	Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Co		3e-61
1hdy_A	374	Three-Dimensional Structures Of Three Human Alcohol		6e-59
1hdx_A	374	Three-Dimensional Structures Of Three Human Alcohol		5e-58
6adh_A	374	Structure Of Triclinic Ternary Complex Of Horse Liv		7e-58
1axg_A	374	Crystal Structure Of The Val203->ala Mutant Of Live		7e-58
1qv6_A	374	Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG		8e-58
1hdz_A	374	Three-Dimensional Structures Of Three Human Alcohol		9e-58
1ht0_A	374	Human Gamma-2 Alcohol Dehydrogense Length = 374		1e-57
3oq6_A	374	Horse Liver Alcohol Dehydrogenase A317c Mutant Comp		1e-57
1n8k_A	374	Horse Liver Alcohol Dehydrogenase Val292thr Mutant		1e-57
1ju9_A	374	Horse Liver Alcohol Dehydrogenase Val292ser Mutant		2e-57
1axe_A	374	Crystal Structure Of The Active-Site Mutant Phe93->		3e-57
1qlh_A	374	Horse Liver Alcohol Dehydrogenase Complexed To Nad		3e-57
1a71_A	374	Ternary Complex Of An Active Site Double Mutant Of		3e-57
1htb_A	374	Crystallization Of Human Beta3 Alcohol Dehydrogenas		6e-57
1ee2_A	373	The Structure Of Steroid-Active Alcohol Dehydrogena		6e-57
1mgo_A	374	Horse Liver Alcohol Dehydrogenase Phe93ala Mutant L		6e-57
1ee2_B	373	The Structure Of Steroid-Active Alcohol Dehydrogena		6e-57
3cos_A	381	Crystal Structure Of Human Class Ii Alcohol Dehydro		2e-55
1hso_A	374	Human Alpha Alcohol Dehydrogenase (Adh1a) Length =		3e-55
1e3l_A	376	P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase		1e-53
1e3e_A	376	Mouse Class Ii Alcohol Dehydrogenase Complex With N		2e-52
1d1t_A	373	Mutant Of Human Sigma Alcohol Dehydrogenase With Le		9e-52
1p0c_A	373	Crystal Structure Of The Nadp(H)-Dependent Vertebra		9e-52
1agn_A	373	X-Ray Structure Of Human Sigma Alcohol Dehydrogenas		1e-51
1f8f_A	371	Crystal Structure Of Benzyl Alcohol Dehydrogenase F		5e-23
1vj0_A	380	Crystal Structure Of Alcohol Dehydrogenase (Tm0436)		4e-09
1rjw_A	339	Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd		7e-08
3pii_A	339	Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog		8e-08
3ftn_A	352	Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDRO		2e-07
3fsr_A	352	Chimera Of Alcohol Dehydrogenase By Exchange Of The		3e-07
3meq_A	365	Crystal Structure Of Alcohol Dehydrogenase From Bru		1e-06
2dfv_A	347	Hyperthermophilic Threonine Dehydrogenase From Pyro		2e-06
2d8a_A	348	Crystal Structure Of Ph0655 From Pyrococcus Horikos		2e-06
2nvb_A	352	Contribution Of Pro275 To The Thermostability Of Th		4e-06
1ykf_A	352	Nadp-Dependent Alcohol Dehydrogenase From Thermoana		9e-06
2xaa_A	345	Alcohol Dehydrogenase Adh-'a' From Rhodococcus Rube		1e-05
2b83_A	351	A Single Amino Acid Substitution In The Clostridium		2e-05
1ped_A	351	Bacterial Secondary Alcohol Dehydrogenase (Apo-Form		3e-05
4ej6_A	370	Crystal Structure Of A Putative Zinc-Binding Dehydr		3e-05
1jqb_A	351	Alcohol Dehydrogenase From Clostridium Beijerinckii		9e-05
1llu_A	342	The Ternary Complex Of Pseudomonas Aeruginosa Alcoh		1e-04
3gfb_A	350	L-Threonine Dehydrogenase (Tktdh) From The Hyperthe		1e-04
2dq4_A	343	Crystal Structure Of Threonine 3-Dehydrogenase Leng		7e-04
3fpl_A	351	Chimera Of Alcohol Dehydrogenase By Exchange Of The		7e-04

>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From Arabidopsis Thaliana, Complex With Nadh Length = 378

Iteration: 1
 Score =  275 bits (703), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 150/362 (41%), Positives = 200/362 (55%), Gaps = 5/362 (1%)
Query: 5   PGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXX 64
           P KPL          +A E+RIKIL T+LCH+D   W  S   P+   P I         
Sbjct: 17  PNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTW--SGKDPEGLFPCILGHEAAGIV 74
Query: 65  XXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPN-MPRDGTSRFRE 123
                        D V+P +  +C EC+ CKS K+N C K         M  D  SRF  
Sbjct: 75  ESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRF-S 133
Query: 124 LKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEV 183
           + G  I+HF+  S+F++Y+VV    V KI P  PL   CLL CGV TG+GA W  A VE 
Sbjct: 134 VNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEP 193
Query: 184 GSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTV 243
           GS VAIF             +   AS+IIG+DI+ +K+E  KKFG+ +F+NP    DK +
Sbjct: 194 GSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKD-HDKPI 252
Query: 244 SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK 303
            +VI ++TDGG DY FECIG  SVM  A     +GWG +VI+GV   G  IS    +++ 
Sbjct: 253 QEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT 312
Query: 304 GRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRC 363
           GR   GT FGG K R+ +  L +KY++KE+ + E+ITH ++  +INKAFDLL EG  LRC
Sbjct: 313 GRVWKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCLRC 372
Query: 364 II 365
           ++
Sbjct: 373 VL 374

>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) In Complex With Nad+ Length = 396

Iteration: 1
 Score =  268 bits (686), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 149/367 (40%), Positives = 201/367 (54%), Gaps = 11/367 (2%)
Query: 5   PGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXX 64
           P KPL          +A E+R+K+L T+LCH+D   W  S   P+   P +         
Sbjct: 35  PNKPLVIEDVQVAPPQAGEVRVKVLYTALCHTDAYTW--SGKDPEGLFPCVLGHEAAGIV 92
Query: 65  XXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKF----GRGYRPNMPRDGTSR 120
                        D V+P +  +C EC+ CKS K+N C K     G G    M  D  SR
Sbjct: 93  ESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVGV---MMNDRKSR 149
Query: 121 FRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAG 180
           F  + G  I+HF+  S+F++Y+VV    V KI P  PL   CLL CGV TG+GA W  A 
Sbjct: 150 F-SINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPVAPLEKVCLLGCGVPTGLGAVWNTAK 208
Query: 181 VEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 240
           VE GS VA+F             +   AS+IIG+DI+ +KF+  K FG+T+FINP    +
Sbjct: 209 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDSKKFDRAKNFGVTEFINPKE-HE 267
Query: 241 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE 300
           + + QVI ++TDGG DY FECIG  SVM  A     +GWG +VI+GV   G  IS    +
Sbjct: 268 QPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQ 327
Query: 301 ILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS 360
           ++ GR   GT FGG K RS + +L  KYL KE+ + E+ITH ++  DINKAFDL+ +G  
Sbjct: 328 LVTGRVWKGTAFGGFKSRSQVPSLVDKYLKKEIKVDEYITHNMTLADINKAFDLMHDGDC 387
Query: 361 LRCIIWM 367
           LR ++ M
Sbjct: 388 LRVVLDM 394

>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With N6022 Length = 374

Iteration: 1
 Score =  241 bits (615), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 146/364 (40%), Positives = 201/364 (55%), Gaps = 12/364 (3%)
Query: 6   GKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXX 65
           GKPL          KA E+RIKI+ T++CH+D  +  S  D P+   PVI          
Sbjct: 17  GKPLSIEEIEVAPPKAHEVRIKIIATAVCHTD-AYTLSGAD-PEGCFPVILGHEGAGIVE 74
Query: 66  XXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKF----GRGYRPNMPRDGTSRF 121
                       D V+P++   CGEC+ C + K+N C K     G+G  P    DGTSRF
Sbjct: 75  SVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMP----DGTSRF 130
Query: 122 RELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGV 181
              KG  I H++  S+F+EY+VV    V KI P  PL   CLL CG+STG GAA   A +
Sbjct: 131 T-CKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKL 189
Query: 182 EVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 241
           E GS  A+F             ++  AS+IIGVDIN +KF   K+FG T+ INP     K
Sbjct: 190 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDF-SK 248
Query: 242 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI 301
            + +V+ EMTDGG DY FECIG   VM  A  +  +GWG +V++GV   G  I+    ++
Sbjct: 249 PIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQL 308
Query: 302 LKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL 361
           + GR+  GT FGG K    +  L  +Y+ K++ + EF+TH +SF +INKAF+L+  GKS+
Sbjct: 309 VTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKSI 368
Query: 362 RCII 365
           R ++
Sbjct: 369 RTVV 372

>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A Glutathione- Dependent Formaldehyde Dehydrogenase) Length = 373

Iteration: 1
 Score =  241 bits (615), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 146/364 (40%), Positives = 201/364 (55%), Gaps = 12/364 (3%)
Query: 6   GKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXX 65
           GKPL          KA E+RIKI+ T++CH+D  +  S  D P+   PVI          
Sbjct: 16  GKPLSIEEIEVAPPKAHEVRIKIIATAVCHTD-AYTLSGAD-PEGCFPVILGHEGAGIVE 73
Query: 66  XXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKF----GRGYRPNMPRDGTSRF 121
                       D V+P++   CGEC+ C + K+N C K     G+G  P    DGTSRF
Sbjct: 74  SVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMP----DGTSRF 129
Query: 122 RELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGV 181
              KG  I H++  S+F+EY+VV    V KI P  PL   CLL CG+STG GAA   A +
Sbjct: 130 T-CKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKL 188
Query: 182 EVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 241
           E GS  A+F             ++  AS+IIGVDIN +KF   K+FG T+ INP     K
Sbjct: 189 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDF-SK 247
Query: 242 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI 301
            + +V+ EMTDGG DY FECIG   VM  A  +  +GWG +V++GV   G  I+    ++
Sbjct: 248 PIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQL 307
Query: 302 LKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL 361
           + GR+  GT FGG K    +  L  +Y+ K++ + EF+TH +SF +INKAF+L+  GKS+
Sbjct: 308 VTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKSI 367
Query: 362 RCII 365
           R ++
Sbjct: 368 RTVV 371

>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With S-(Hydroxymethyl)glutathione And Nadh Length = 374

Iteration: 1
 Score =  241 bits (615), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 146/364 (40%), Positives = 201/364 (55%), Gaps = 12/364 (3%)
Query: 6   GKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXX 65
           GKPL          KA E+RIKI+ T++CH+D  +  S  D P+   PVI          
Sbjct: 17  GKPLSIEEIEVAPPKAHEVRIKIIATAVCHTD-AYTLSGAD-PEGCFPVILGHEGAGIVE 74
Query: 66  XXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKF----GRGYRPNMPRDGTSRF 121
                       D V+P++   CGEC+ C + K+N C K     G+G  P    DGTSRF
Sbjct: 75  SVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMP----DGTSRF 130
Query: 122 RELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGV 181
              KG  I H++  S+F+EY+VV    V KI P  PL   CLL CG+STG GAA   A +
Sbjct: 131 T-CKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKL 189
Query: 182 EVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 241
           E GS  A+F             ++  AS+IIGVDIN +KF   K+FG T+ INP     K
Sbjct: 190 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDF-SK 248
Query: 242 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI 301
            + +V+ EMTDGG DY FECIG   VM  A  +  +GWG +V++GV   G  I+    ++
Sbjct: 249 PIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQL 308
Query: 302 LKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL 361
           + GR+  GT FGG K    +  L  +Y+ K++ + EF+TH +SF +INKAF+L+  GKS+
Sbjct: 309 VTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKSI 368
Query: 362 RCII 365
           R ++
Sbjct: 369 RTVV 372

>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With Nad(H) Length = 373

Iteration: 1
 Score =  241 bits (615), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 146/364 (40%), Positives = 201/364 (55%), Gaps = 12/364 (3%)
Query: 6   GKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXX 65
           GKPL          KA E+RIKI+ T++CH+D  +  S  D P+   PVI          
Sbjct: 16  GKPLSIEEIEVAPPKAHEVRIKIIATAVCHTD-AYTLSGAD-PEGCFPVILGHLGAGIVE 73
Query: 66  XXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKF----GRGYRPNMPRDGTSRF 121
                       D V+P++   CGEC+ C + K+N C K     G+G  P    DGTSRF
Sbjct: 74  SVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMP----DGTSRF 129
Query: 122 RELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGV 181
              KG  I H++  S+F+EY+VV    V KI P  PL   CLL CG+STG GAA   A +
Sbjct: 130 T-CKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKL 188
Query: 182 EVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 241
           E GS  A+F             ++  AS+IIGVDIN +KF   K+FG T+ INP     K
Sbjct: 189 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDF-SK 247
Query: 242 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI 301
            + +V+ EMTDGG DY FECIG   VM  A  +  +GWG +V++GV   G  I+    ++
Sbjct: 248 PIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQL 307
Query: 302 LKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL 361
           + GR+  GT FGG K    +  L  +Y+ K++ + EF+TH +SF +INKAF+L+  GKS+
Sbjct: 308 VTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKSI 367
Query: 362 RCII 365
           R ++
Sbjct: 368 RTVV 371

>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed With Nicotinamide Adenine Dinucleotide (Nad), And Zinc Length = 374

Iteration: 1
 Score =  232 bits (591), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 133/360 (36%), Positives = 190/360 (52%), Gaps = 7/360 (1%)
Query: 7   KPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXX 66
           KPL           A EIRIKI+ T +CH+D+          K   PV+           
Sbjct: 19  KPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKH--KDGFPVVLGHEGAGIVES 76
Query: 67  XXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 126
                      + V+P+F   CGECR C+S K+N C K      P++     +RF   KG
Sbjct: 77  VGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFT-CKG 135
Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGST 186
             +  FL  S+F++Y+VV+   V KI P  PL   CLL CGVSTG GAA   A VE GST
Sbjct: 136 RKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGST 195
Query: 187 VAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246
            A+F                 A +II VD+NP+KFE  K FG TDF+NP     + +SQV
Sbjct: 196 CAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPND-HSEPISQV 254
Query: 247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG-VEMHGSPISLNSIEILKGR 305
           + +MT+GG D+  EC+G   VM +A  S  +GWG +V++G  ++H   ++   I+++ GR
Sbjct: 255 LSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLH--DVATRPIQLIAGR 312
Query: 306 SVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
           +  G+ FGG K +  +  + + YLDK++ L EFITH +    +N A DL+  GK +R ++
Sbjct: 313 TWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVL 372

>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  224 bits (571), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 133/359 (37%), Positives = 183/359 (50%), Gaps = 5/359 (1%)
Query: 7   KPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXX 66
           KP           KA+E+RIK++   +CH+D      +      PLPVI           
Sbjct: 19  KPFSIEDVEVAPPKAYEVRIKMVAVGICHTDDHVVSGNL---VTPLPVILGHEAAGIVES 75
Query: 67  XXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 126
                      D V+P+F   CG+CR CK+ +SN C K   G      +DGT RF   +G
Sbjct: 76  VGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFT-CRG 134
Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGST 186
             IHHFL  S+F++Y+VVD   V KI    PL   CL+ CG STG G+A  VA V  GST
Sbjct: 135 KPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGST 194
Query: 187 VAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246
            A+F             +   A++II VDIN +KF   K+ G T+ INP     K + +V
Sbjct: 195 CAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDY-KKPIQEV 253
Query: 247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS 306
           +KEMTDGG D+ FE IG    M  +     E  G +VI+GV      +S+N + +L GR+
Sbjct: 254 LKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLTGRT 313
Query: 307 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
             G  +GG K +  I  L   ++ K+ +L   ITH + F  IN+ FDLL  GKS+R ++
Sbjct: 314 WKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINEGFDLLHSGKSIRTVL 372

>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  221 bits (563), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 132/359 (36%), Positives = 182/359 (50%), Gaps = 5/359 (1%)
Query: 7   KPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXX 66
           KP           KA+E+RIK++   +C +D      +      PLPVI           
Sbjct: 19  KPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNL---VTPLPVILGHEAAGIVES 75
Query: 67  XXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 126
                      D V+P+F   CG+CR CK+ +SN C K   G      +DGT RF   +G
Sbjct: 76  VGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFT-CRG 134
Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGST 186
             IHHFL  S+F++Y+VVD   V KI    PL   CL+ CG STG G+A  VA V  GST
Sbjct: 135 KPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGST 194
Query: 187 VAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246
            A+F             +   A++II VDIN +KF   K+ G T+ INP     K + +V
Sbjct: 195 CAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDY-KKPIQEV 253
Query: 247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS 306
           +KEMTDGG D+ FE IG    M  +     E  G +VI+GV      +S+N + +L GR+
Sbjct: 254 LKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLTGRT 313
Query: 307 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
             G  +GG K +  I  L   ++ K+ +L   ITH + F  IN+ FDLL  GKS+R ++
Sbjct: 314 WKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINEGFDLLHSGKSIRTVL 372

>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver Alcohol Dehydrogenase At 2.9 Angstroms Resolution Length = 374

Iteration: 1
 Score =  221 bits (562), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 132/359 (36%), Positives = 183/359 (50%), Gaps = 5/359 (1%)
Query: 7   KPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXX 66
           KP           KA E+RIK++ T +C SD      +      PLPVI           
Sbjct: 19  KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL---VTPLPVIAGHEAAGIVES 75
Query: 67  XXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 126
                      D V+P+F   CG+CR CK  + N C K          +DGTSRF   +G
Sbjct: 76  IGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFT-CRG 134
Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGST 186
             IHHFL  S+F++Y+VVD   V KI    PL   CL+ CG STG G+A KVA V  GST
Sbjct: 135 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGST 194
Query: 187 VAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246
            A+F             +   A++IIGVDIN +KF   K+ G T+ +NP     K + +V
Sbjct: 195 CAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDY-KKPIQEV 253
Query: 247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS 306
           + EM++GG D+ FE IG    M  A +  +E +G +VI+GV      +S+N + +L GR+
Sbjct: 254 LTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRT 313
Query: 307 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
             G  FGG K +  +  L   ++ K+  L   ITH + F  IN+ FDLL  G+S+R I+
Sbjct: 314 WKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTIL 372

>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver Alcohol Dehydrogenase Complexed With Cofactor Nad And Inhibitor Trifluoroethanol Solved To 2.5 Angstrom Resolution Length = 374

Iteration: 1
 Score =  221 bits (562), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 132/359 (36%), Positives = 183/359 (50%), Gaps = 5/359 (1%)
Query: 7   KPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXX 66
           KP           KA E+RIK++ T +C SD      +      PLPVI           
Sbjct: 19  KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL---VTPLPVIAGHEAAGIVES 75
Query: 67  XXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 126
                      D V+P+F   CG+CR CK  + N C K          +DGTSRF   +G
Sbjct: 76  IGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFT-CRG 134
Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGST 186
             IHHFL  S+F++Y+VVD   V KI    PL   CL+ CG STG G+A KVA V  GST
Sbjct: 135 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGST 194
Query: 187 VAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246
            A+F             +   A++IIGVDIN +KF   K+ G T+ +NP     K + +V
Sbjct: 195 CAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDY-KKPIQEV 253
Query: 247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS 306
           + EM++GG D+ FE IG    M  A +  +E +G +VI+GV      +S+N + +L GR+
Sbjct: 254 LTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRT 313
Query: 307 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
             G  FGG K +  +  L   ++ K+  L   ITH + F  IN+ FDLL  G+S+R I+
Sbjct: 314 WKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTIL 372

>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol Length = 374

Iteration: 1
 Score =  220 bits (561), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 131/359 (36%), Positives = 183/359 (50%), Gaps = 5/359 (1%)
Query: 7   KPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXX 66
           KP           KA E+RIK++ T +C SD      +      PLPVI           
Sbjct: 19  KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDQVVSGTL---VTPLPVIAGHEAAGIVES 75
Query: 67  XXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 126
                      D V+P+F   CG+CR CK  + N C K          +DGTSRF   +G
Sbjct: 76  IGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFT-CRG 134
Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGST 186
             IHHFL  S+F++Y+VVD   V KI    PL   CL+ CG STG G+A KVA V  GST
Sbjct: 135 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGST 194
Query: 187 VAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246
            A+F             +   A++IIGVDIN ++F   K+ G T+ +NP     K + +V
Sbjct: 195 CAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDRFAKAKEVGATECVNPQDY-KKPIQEV 253
Query: 247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS 306
           + EM++GG D+ FE IG    M  A +  +E +G +VI+GV      +S+N + +L GR+
Sbjct: 254 LTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRT 313
Query: 307 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
             G  FGG K +  +  L   ++ K+  L   ITH + F  IN+ FDLL  G+S+R I+
Sbjct: 314 WKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTIL 372

>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  220 bits (561), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 132/359 (36%), Positives = 182/359 (50%), Gaps = 5/359 (1%)
Query: 7   KPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXX 66
           KP           KA+E+RIK++   +C +D      +      PLPVI           
Sbjct: 19  KPFSIEDVEVAPPKAYEVRIKMVAVGICGTDDHVVSGNL---VTPLPVILGHEAAGIVES 75
Query: 67  XXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 126
                      D V+P+F   CG+CR CK+ +SN C K   G      +DGT RF   +G
Sbjct: 76  VGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFT-CRG 134
Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGST 186
             IHHFL  S+F++Y+VVD   V KI    PL   CL+ CG STG G+A  VA V  GST
Sbjct: 135 KPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGST 194
Query: 187 VAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246
            A+F             +   A++II VDIN +KF   K+ G T+ INP     K + +V
Sbjct: 195 CAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDY-KKPIQEV 253
Query: 247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS 306
           +KEMTDGG D+ FE IG    M  +     E  G +VI+GV      +S+N + +L GR+
Sbjct: 254 LKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLTGRT 313
Query: 307 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
             G  +GG K +  I  L   ++ K+ +L   ITH + F  IN+ FDLL  GKS+R ++
Sbjct: 314 WKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINEGFDLLHSGKSIRTVL 372

>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense Length = 374

Iteration: 1
 Score =  220 bits (561), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 132/359 (36%), Positives = 182/359 (50%), Gaps = 5/359 (1%)
Query: 7   KPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXX 66
           KP           KA E+RIK++   +C SD      +      PLPVI           
Sbjct: 19  KPFSIEEVEVAPPKAHEVRIKMVAAGICRSDEHVVSGNL---VTPLPVILGHEAAGIVES 75
Query: 67  XXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 126
                      D V+P+F   CG+CR CK+ +SN C K   G      +DGT RF    G
Sbjct: 76  VGEGVTTVKPGDKVIPLFTPQCGKCRICKNPESNYCLKNDLGNPRGTLQDGTRRFT-CSG 134
Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGST 186
             IHHF+ +S+F++Y+VVD   V KI    PL   CL+ CG STG G+A KVA V  GST
Sbjct: 135 KPIHHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTPGST 194
Query: 187 VAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246
            A+F             +   A++II VDIN +KF   K+ G T+ INP     K + +V
Sbjct: 195 CAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDY-KKPIQEV 253
Query: 247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS 306
           +KEMTDGG D+ FE IG    M  +     E  G +VI+GV      +S+N + +L GR+
Sbjct: 254 LKEMTDGGVDFSFEVIGQLDTMMASLLCCHEACGTSVIVGVPPDSQNLSINPMLLLTGRT 313
Query: 307 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
             G  FGG K +  +  L   ++ K+ +L   IT+ + F  IN+ FDLL  GKS+R ++
Sbjct: 314 WKGAIFGGFKSKESVPKLVADFMAKKFSLDALITNVLPFEKINEGFDLLRSGKSIRTVL 372

>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol Length = 374

Iteration: 1
 Score =  220 bits (560), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 132/359 (36%), Positives = 183/359 (50%), Gaps = 5/359 (1%)
Query: 7   KPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXX 66
           KP           KA E+RIK++ T +C SD      +      PLPVI           
Sbjct: 19  KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL---VTPLPVIAGHEAAGIVES 75
Query: 67  XXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 126
                      D V+P+F   CG+CR CK  + N C K          +DGTSRF   +G
Sbjct: 76  IGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFT-CRG 134
Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGST 186
             IHHFL  S+F++Y+VVD   V KI    PL   CL+ CG STG G+A KVA V  GST
Sbjct: 135 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGST 194
Query: 187 VAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246
            A+F             +   A++IIGVDIN +KF   K+ G T+ +NP     K + +V
Sbjct: 195 CAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDY-KKPIQEV 253
Query: 247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS 306
           + EM++GG D+ FE IG    M  A +  +E +G +VI+GV      +S+N + +L GR+
Sbjct: 254 LTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRT 313
Query: 307 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
             G  FGG K +  +  L   ++ K+  L   ITH + F  IN+ FDLL  G+S+R I+
Sbjct: 314 WKGCIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTIL 372

>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant Complexed To Nad+ And Pyrazole Length = 374

Iteration: 1
 Score =  219 bits (559), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 132/359 (36%), Positives = 182/359 (50%), Gaps = 5/359 (1%)
Query: 7   KPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXX 66
           KP           KA E+RIK++ T +C SD      +      PLPVI           
Sbjct: 19  KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL---VTPLPVIAGHEAAGIVES 75
Query: 67  XXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 126
                      D V+P+F   CG+CR CK  + N C K          +DGTSRF   +G
Sbjct: 76  IGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFT-CRG 134
Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGST 186
             IHHFL  S+F++Y+VVD   V KI    PL   CL+ CG STG G+A KVA V  GST
Sbjct: 135 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGST 194
Query: 187 VAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246
            A+F             +   A++IIGVDIN +KF   K+ G T+ +NP     K + +V
Sbjct: 195 CAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDY-KKPIQEV 253
Query: 247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS 306
           + EM++GG D+ FE IG    M  A +  +E +G +VI GV      +S+N + +L GR+
Sbjct: 254 LTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVITGVPPDSQNLSMNPMLLLSGRT 313
Query: 307 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
             G  FGG K +  +  L   ++ K+  L   ITH + F  IN+ FDLL  G+S+R I+
Sbjct: 314 WKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTIL 372

>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant Length = 374

Iteration: 1
 Score =  219 bits (558), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 132/359 (36%), Positives = 182/359 (50%), Gaps = 5/359 (1%)
Query: 7   KPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXX 66
           KP           KA E+RIK++ T +C SD      +      PLPVI           
Sbjct: 19  KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL---VTPLPVIAGHEAAGIVES 75
Query: 67  XXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 126
                      D V+P+F   CG+CR CK  + N C K          +DGTSRF   +G
Sbjct: 76  IGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFT-CRG 134
Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGST 186
             IHHFL  S+F++Y+VVD   V KI    PL   CL+ CG STG G+A KVA V  GST
Sbjct: 135 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGST 194
Query: 187 VAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246
            A+F             +   A++IIGVDIN +KF   K+ G T+ +NP     K + +V
Sbjct: 195 CAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDY-KKPIQEV 253
Query: 247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS 306
           + EM++GG D+ FE IG    M  A +  +E +G +VI GV      +S+N + +L GR+
Sbjct: 254 LTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVISGVPPDSQNLSMNPMLLLSGRT 313
Query: 307 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
             G  FGG K +  +  L   ++ K+  L   ITH + F  IN+ FDLL  G+S+R I+
Sbjct: 314 WKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTIL 372

>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of Horse Liver Alcohol Dehydrogenase In Complex With Nad And Inhibitor Trifluoroethanol Length = 374

Iteration: 1
 Score =  218 bits (556), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 131/359 (36%), Positives = 183/359 (50%), Gaps = 5/359 (1%)
Query: 7   KPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXX 66
           KP           KA E+RIK++ T +C SD      +      PLPVI           
Sbjct: 19  KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL---VTPLPVIAGHEAAGIVES 75
Query: 67  XXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 126
                      D V+P++   CG+CR CK  + N C K          +DGTSRF   +G
Sbjct: 76  IGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFT-CRG 134
Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGST 186
             IHHFL  S+F++Y+VVD   V KI    PL   CL+ CG STG G+A KVA V  GST
Sbjct: 135 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGST 194
Query: 187 VAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246
            A+F             +   A++IIGVDIN +KF   K+ G T+ +NP     K + +V
Sbjct: 195 CAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDY-KKPIQEV 253
Query: 247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS 306
           + EM++GG D+ FE IG    M  A +  +E +G +VI+GV      +S+N + +L GR+
Sbjct: 254 LTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRT 313
Query: 307 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
             G  FGG K +  +  L   ++ K+  L   ITH + F  IN+ FDLL  G+S+R I+
Sbjct: 314 WKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTIL 372

>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double Mutant Of Gly 293 Ala And Pro 295 Thr Length = 374

Iteration: 1
 Score =  218 bits (556), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 131/359 (36%), Positives = 182/359 (50%), Gaps = 5/359 (1%)
Query: 7   KPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXX 66
           KP           KA E+RIK++ T +C SD      +      PLPVI           
Sbjct: 19  KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL---VTPLPVIAGHEAAGIVES 75
Query: 67  XXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 126
                      D V+P+F   CG+CR CK  + N C K          +DGTSRF   +G
Sbjct: 76  IGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFT-CRG 134
Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGST 186
             IHHFL  S+F++Y+VVD   V KI    PL   CL+ CG STG G+A KVA V  GST
Sbjct: 135 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGST 194
Query: 187 VAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246
            A+F             +   A++IIGVDIN +KF   K+ G T+ +NP     K + +V
Sbjct: 195 CAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDY-KKPIQEV 253
Query: 247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS 306
           + EM++GG D+ FE IG    M  A +  +E +G +VI+ V      +S+N + +L GR+
Sbjct: 254 LTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVAVTPDSQNLSMNPMLLLSGRT 313
Query: 307 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
             G  FGG K +  +  L   ++ K+  L   ITH + F  IN+ FDLL  G+S+R I+
Sbjct: 314 WKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTIL 372

>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With Nad And Trifluoroethanol Length = 374

Iteration: 1
 Score =  218 bits (556), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 131/359 (36%), Positives = 183/359 (50%), Gaps = 5/359 (1%)
Query: 7   KPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXX 66
           KP           KA E+RIK++ T +C SD      +      PLPVI           
Sbjct: 19  KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL---VTPLPVIAGHEAAGIVES 75
Query: 67  XXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 126
                      D V+P++   CG+CR CK  + N C K          +DGTSRF   +G
Sbjct: 76  IGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFT-CRG 134
Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGST 186
             IHHFL  S+F++Y+VVD   V KI    PL   CL+ CG STG G+A KVA V  GST
Sbjct: 135 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGST 194
Query: 187 VAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246
            A+F             +   A++IIGVDIN +KF   K+ G T+ +NP     K + +V
Sbjct: 195 CAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDY-KKPIQEV 253
Query: 247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS 306
           + EM++GG D+ FE IG    M  A +  +E +G +VI+GV      +S+N + +L GR+
Sbjct: 254 LTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRT 313
Query: 307 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
             G  FGG K +  +  L   ++ K+  L   ITH + F  IN+ FDLL  G+S+R I+
Sbjct: 314 WKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTIL 372

>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10 MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+ And 1 Mm 4-Iodopyrazole At 25 C Length = 374

Iteration: 1
 Score =  218 bits (554), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 131/355 (36%), Positives = 179/355 (50%), Gaps = 5/355 (1%)
Query: 7   KPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXX 66
           KP           KA+E+RIK++   +C +D      +      PLPVI           
Sbjct: 19  KPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNL---VTPLPVILGHEAAGIVES 75
Query: 67  XXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 126
                      D V+P+F   CG+CR CK+ +SN C K   G      +DGT RF   +G
Sbjct: 76  VGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFT-CRG 134
Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGST 186
             IHHFL  S+F++Y+VVD   V KI    PL   CL+ CG STG G+A  VA V  GST
Sbjct: 135 KPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGST 194
Query: 187 VAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246
            A+F             +   A++II VDIN +KF   K+ G T+ INP     K + +V
Sbjct: 195 CAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDY-KKPIQEV 253
Query: 247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS 306
           +KEMTDGG D+ FE IG    M  +     E  G +VI+GV      +S+N + +L GR+
Sbjct: 254 LKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLTGRT 313
Query: 307 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL 361
             G  +GG K +  I  L   ++ K+ +L   ITH + F  IN+ FDLL  GKS+
Sbjct: 314 WKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINEGFDLLHSGKSI 368

>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score =  218 bits (554), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 133/359 (37%), Positives = 183/359 (50%), Gaps = 6/359 (1%)
Query: 7   KPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXX 66
           KP           KA E+RIK++   +C SD      +      PLPVI           
Sbjct: 19  KPFSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSGTL---VAPLPVIAGHEAAGIVES 75
Query: 67  XXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 126
                      D V+P+F   CG+C  CK  + N C K     R  M +DGTSRF   +G
Sbjct: 76  IGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLCLKNLSMPRGTM-QDGTSRFT-CRG 133
Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGST 186
             IHHFL  S+F++Y+VVD   V KI    PL   CL+ CG STG G+A KVA V  GST
Sbjct: 134 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQGST 193
Query: 187 VAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246
            A+F             +   A++IIGVDIN +KF   K+ G T+ +NP     K + +V
Sbjct: 194 CAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDY-KKPIQEV 252
Query: 247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS 306
           + EM++GG D+ FE IG    M  A +  +E +G +VI+GV      +S+N + +L GR+
Sbjct: 253 LTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRT 312
Query: 307 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
             G  FGG K +  +  L   ++ K+  L   ITH + F  IN+ FDLL  GKS+R I+
Sbjct: 313 WKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGKSIRTIL 371

>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant Length = 374

Iteration: 1
 Score =  218 bits (554), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 131/359 (36%), Positives = 182/359 (50%), Gaps = 5/359 (1%)
Query: 7   KPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXX 66
           KP           KA E+RIK++ T +C SD      +      PLPVI           
Sbjct: 19  KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL---VTPLPVIAGHEAAGIVES 75
Query: 67  XXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 126
                      D V+P+    CG+CR CK  + N C K          +DGTSRF   +G
Sbjct: 76  IGEGVTTVRPGDKVIPLATPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFT-CRG 134
Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGST 186
             IHHFL  S+F++Y+VVD   V KI    PL   CL+ CG STG G+A KVA V  GST
Sbjct: 135 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGST 194
Query: 187 VAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246
            A+F             +   A++IIGVDIN +KF   K+ G T+ +NP     K + +V
Sbjct: 195 CAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDY-KKPIQEV 253
Query: 247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS 306
           + EM++GG D+ FE IG    M  A +  +E +G +VI+GV      +S+N + +L GR+
Sbjct: 254 LTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRT 313
Query: 307 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
             G  FGG K +  +  L   ++ K+  L   ITH + F  IN+ FDLL  G+S+R I+
Sbjct: 314 WKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTIL 372

>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score =  217 bits (553), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 133/359 (37%), Positives = 183/359 (50%), Gaps = 6/359 (1%)
Query: 7   KPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXX 66
           KP           KA E+RIK++   +C SD      +      PLPVI           
Sbjct: 19  KPFSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSGTL---VAPLPVIAGHEAAGIVES 75
Query: 67  XXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 126
                      D V+P+F   CG+C  CK  + N C K     R  M +DGTSRF   +G
Sbjct: 76  IGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLCLKNLSMPRGTM-QDGTSRFT-CRG 133
Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGST 186
             IHHFL  S+F++Y+VVD   V KI    PL   CL+ CG STG G+A KVA V  GST
Sbjct: 134 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQGST 193
Query: 187 VAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246
            A+F             +   A++IIGVDIN +KF   K+ G T+ +NP     K + +V
Sbjct: 194 CAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDY-KKPIQEV 252
Query: 247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS 306
           + EM++GG D+ FE IG    M  A +  +E +G +VI+GV      +S+N + +L GR+
Sbjct: 253 LTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRT 312
Query: 307 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
             G  FGG K +  +  L   ++ K+  L   ITH + F  IN+ FDLL  GKS+R I+
Sbjct: 313 WKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGKSIRTIL 371

>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase (Adh4) In Complex With Nad And Zn Length = 381

Iteration: 1
 Score =  212 bits (540), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 130/364 (35%), Positives = 181/364 (49%), Gaps = 8/364 (2%)
Query: 6   GKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXX 65
           GKPL          KA E+RI+I+ TSLCH+D T   S      L  PVI          
Sbjct: 20  GKPLCIEEVEVAPPKAHEVRIQIIATSLCHTDATVIDSK--FEGLAFPVIVGHEAAGIVE 77
Query: 66  XXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRP----NMPRDGTSRF 121
                       D V+P++   C +C+ C S  +N C K      P     +  D TSRF
Sbjct: 78  SIGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKISNLKSPASDQQLMEDKTSRF 137
Query: 122 RELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGV 181
              KG  ++HF   S+F++Y+VV   ++ KI     L   CLL CG STG GAA   A V
Sbjct: 138 T-CKGKPVYHFFGTSTFSQYTVVSDINLAKIDDDANLERVCLLGCGFSTGYGAAINNAKV 196
Query: 182 EVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 241
             GST A+F             +   AS+IIG+DIN EKF   K  G TD +NP     K
Sbjct: 197 TPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKALGATDCLNPRDL-HK 255
Query: 242 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI 301
            + +VI E+T GG D+  +C G +  M  A + +  GWG    +GV      +++   E+
Sbjct: 256 PIQEVIIELTKGGVDFALDCAGGSETMKAALDCTTAGWGSCTFIGVAAGSKGLTVFPEEL 315
Query: 302 LKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL 361
           + GR++ GT+FGG K    I  L   Y +K+ NL   +TH + F  I++AFDL+ +GKS+
Sbjct: 316 IIGRTINGTFFGGWKSVDSIPKLVTDYKNKKFNLDALVTHTLPFDKISEAFDLMNQGKSI 375
Query: 362 RCII 365
           R I+
Sbjct: 376 RTIL 379

>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a) Length = 374

Iteration: 1
 Score =  212 bits (539), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 131/360 (36%), Positives = 179/360 (49%), Gaps = 5/360 (1%)
Query: 7   KPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXX 66
           KP           KA E+RIK++   +C +D      +      PLPVI           
Sbjct: 19  KPFSIEEVEVAPPKAHEVRIKMVAVGICGTDDHVVSGTM---VTPLPVILGHEAAGIVES 75
Query: 67  XXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 126
                      D V+P+    CG+CR CK+ +SN C K          +DGTSRF   + 
Sbjct: 76  VGEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYCLKNDVSNPQGTLQDGTSRFT-CRR 134
Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGST 186
             IHHFL IS+F++Y+VVD   V KI    PL   CL+ CG STG G+A  VA V  GST
Sbjct: 135 KPIHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGST 194
Query: 187 VAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246
            A+F             +   A++II VDIN +KF   K+ G T+ INP     K + +V
Sbjct: 195 CAVFGLGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDY-KKPIQEV 253
Query: 247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS 306
           +KEMTDGG D+ FE IG    M  +     E  G +VI+GV      +S+N + +L GR+
Sbjct: 254 LKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQNLSMNPMLLLTGRT 313
Query: 307 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIW 366
             G   GG K +  +  L   ++ K+ +L   ITH + F  IN+ FDLL  GKS+R I+ 
Sbjct: 314 WKGAILGGFKSKECVPKLVADFMAKKFSLDALITHVLPFEKINEGFDLLHSGKSIRTILM 373

>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  206 bits (525), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 124/365 (33%), Positives = 185/365 (50%), Gaps = 13/365 (3%)
Query: 6   GKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPL-PVIFXXXXXXXX 64
           G PL          KA E+RI+++ T +CH+D+    ++TD  K  L PV+         
Sbjct: 18  GSPLCIEEIEVSPPKACEVRIQVIATCVCHTDI----NATDPKKKALFPVVLGHECAGIV 73
Query: 65  XXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR----DGTSR 120
                        D V+P F   C  C+ C S  +N C K      P + +    D TSR
Sbjct: 74  ESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSR 133
Query: 121 FRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAG 180
           F   KG  I+HF+ +SSF++Y+VV   ++ ++     L   CL+ CG S+G GAA   A 
Sbjct: 134 FT-CKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAK 192
Query: 181 VEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 240
           V  GST A+F             ++  AS+II +DIN EKF   K  G TD +NP    D
Sbjct: 193 VTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPREL-D 251
Query: 241 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE 300
           K V  VI E+T GG DY  +C G    +  A + +  GWG   ++G ++    +++ +++
Sbjct: 252 KPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVD--EMTIPTVD 309
Query: 301 ILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS 360
           ++ GRS+ GT+FGG K    +  L   Y +K+ +L   +TH + F  IN A DL+ EGKS
Sbjct: 310 VILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGKS 369
Query: 361 LRCII 365
           +R I+
Sbjct: 370 IRTIL 374

>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  203 bits (516), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/365 (33%), Positives = 184/365 (50%), Gaps = 13/365 (3%)
Query: 6   GKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPL-PVIFXXXXXXXX 64
           G PL          KA E+RI+++ T +C +D+    ++TD  K  L PV+         
Sbjct: 18  GSPLCIEEIEVSPPKACEVRIQVIATCVCPTDI----NATDPKKKALFPVVLGHECAGIV 73
Query: 65  XXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR----DGTSR 120
                        D V+P F   C  C+ C S  +N C K      P + +    D TSR
Sbjct: 74  ESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSR 133
Query: 121 FRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAG 180
           F   KG  I+HF+ +SSF++Y+VV   ++ ++     L   CL+ CG S+G GAA   A 
Sbjct: 134 FT-CKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAK 192
Query: 181 VEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 240
           V  GST A+F             ++  AS+II +DIN EKF   K  G TD +NP    D
Sbjct: 193 VTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPREL-D 251
Query: 241 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE 300
           K V  VI E+T GG DY  +C G    +  A + +  GWG   ++G ++    +++ +++
Sbjct: 252 KPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVD--EMTIPTVD 309
Query: 301 ILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS 360
           ++ GRS+ GT+FGG K    +  L   Y +K+ +L   +TH + F  IN A DL+ EGKS
Sbjct: 310 VILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGKS 369
Query: 361 LRCII 365
           +R I+
Sbjct: 370 IRTIL 374

>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine At Position 141 Length = 373

Iteration: 1
 Score =  200 bits (509), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 127/349 (36%), Positives = 178/349 (51%), Gaps = 12/349 (3%)
Query: 20  KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXXXXXXXXXXXXRDL 79
           K  E+RIKIL T +C +D    K  T + K P  VI                      D 
Sbjct: 32  KTKEVRIKILATGICRTDDHVIKG-TMVSKFP--VIVGHEATGIVESIGEGVTTVKPGDK 88
Query: 80  VLPIFHRDCGECRDCKSSKSNTCSK---FGRGYRPNMPRDGTSRFRELKGDVIHHFLNIS 136
           V+P+F   C EC  C++   N C +    GRG       DGT+RF   KG  +HHFLN S
Sbjct: 89  VIPLFLPQCRECNACRNPDGNLCIRSDITGRGVL----ADGTTRFT-CKGKPVHHFLNTS 143
Query: 137 SFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXXX 196
           +FTEY+VVD + V KI    P    CL+ CG STG GAA K   V+ GST  +F      
Sbjct: 144 TFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVG 203
Query: 197 XXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGAD 256
                  +   AS+IIG+D+N +KFE     G T+ I+P     K +S+V+ EMT     
Sbjct: 204 LSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKD-STKPISEVLSEMTGNNVG 262
Query: 257 YCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLK 316
           Y FE IG    M DA  S    +G +V++GV      ++ + + +  GR+  G  FGGLK
Sbjct: 263 YTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLK 322
Query: 317 PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
            R D+  L  ++L K+ +L + ITH + F  I++ F+LL  G+S+R ++
Sbjct: 323 SRDDVPKLVTEFLAKKFDLDQLITHVLPFKKISEGFELLNSGQSIRTVL 371

>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate Alcohol Dehydrogenase (Adh8) Length = 373

Iteration: 1
 Score =  200 bits (509), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 130/361 (36%), Positives = 186/361 (51%), Gaps = 7/361 (1%)
Query: 5   PGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXX 64
           P KPL          KA E+RIKIL + +C SD +  K   ++     PVI         
Sbjct: 18  PHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLK---EIIPSKFPVILGHEAVGVV 74
Query: 65  XXXXXXXXXXXXRDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFREL 124
                        D V+P+F   CG CR CKSS SN C K   G +  +  D TSRF   
Sbjct: 75  ESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFT-C 133
Query: 125 KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVG 184
           +G  I++ +  S+FTEY+VV    V KI P  PL  +CL+ CG +TG GAA   A V  G
Sbjct: 134 RGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLE-SCLIGCGFATGYGAAVNTAKVTPG 192
Query: 185 STVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVS 244
           ST A+F             +   AS+IIGV  + +KF    + G T+ +NP    DK + 
Sbjct: 193 STCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDY-DKPIY 251
Query: 245 QVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKG 304
           +VI E T+GG DY  EC G    M +A  S+  G G TV+LG+      + L+ + +L G
Sbjct: 252 EVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTG 311
Query: 305 RSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCI 364
           RS+ G+ FGG K   +++ L   Y+ K++N+   ++ +++   INKAF+LL  G+ +R I
Sbjct: 312 RSLKGSVFGGFKGE-EVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQGVRSI 370
Query: 365 I 365
           +
Sbjct: 371 M 371

>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase Length = 373

Iteration: 1
 Score =  200 bits (508), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/349 (36%), Positives = 178/349 (51%), Gaps = 12/349 (3%)
Query: 20  KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXXXXXXXXXXXXRDL 79
           K  E+RIKIL T +C +D    K  T + K P  VI                      D 
Sbjct: 32  KTKEVRIKILATGICRTDDHVIKG-TMVSKFP--VIVGHEATGIVESIGEGVTTVKPGDK 88
Query: 80  VLPIFHRDCGECRDCKSSKSNTCSK---FGRGYRPNMPRDGTSRFRELKGDVIHHFLNIS 136
           V+P+F   C EC  C++   N C +    GRG       DGT+RF   KG  +HHF+N S
Sbjct: 89  VIPLFLPQCRECNACRNPDGNLCIRSDITGRGVL----ADGTTRFT-CKGKPVHHFMNTS 143
Query: 137 SFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXXX 196
           +FTEY+VVD + V KI    P    CL+ CG STG GAA K   V+ GST  +F      
Sbjct: 144 TFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVG 203
Query: 197 XXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGAD 256
                  +   AS+IIG+D+N +KFE     G T+ I+P     K +S+V+ EMT     
Sbjct: 204 LSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKD-STKPISEVLSEMTGNNVG 262
Query: 257 YCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLK 316
           Y FE IG    M DA  S    +G +V++GV      ++ + + +  GR+  G  FGGLK
Sbjct: 263 YTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLK 322
Query: 317 PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
            R D+  L  ++L K+ +L + ITH + F  I++ F+LL  G+S+R ++
Sbjct: 323 SRDDVPKLVTEFLAKKFDLDQLITHVLPFKKISEGFELLNSGQSIRTVL 371

>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From Acinetobacter Calcoaceticus Length = 371

Iteration: 1
 Score =  105 bits (261), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 84/345 (24%), Positives = 145/345 (42%), Gaps = 11/345 (3%)
Query: 23  EIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLP 82
           E+ +K++ T +CH+D+           +PLP +                      D V+ 
Sbjct: 33  EVLVKVVATGMCHTDLIVRDQKY---PVPLPAVLGHEGSGIIEAIGPNVTELQVGDHVV- 88
Query: 83  IFHRDCGECRDCKSSKSNTCSKF-GRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEY 141
           + +  CG+C  C +     CS+F GR +         +     +G V  HF   SSF  Y
Sbjct: 89  LSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATY 148
Query: 142 SVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXXXXX 201
           ++    + VK+T  +P+ +   L CG+ TG GA      V   S+   +           
Sbjct: 149 ALSRENNTVKVTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALL 208
Query: 202 XXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 261
             ++  AS II VDI   + E+ K+ G T  IN  T   +     IKE+TDGG ++  E 
Sbjct: 209 AAKVCGASIIIAVDIVESRLELAKQLGATHVINSKT---QDPVAAIKEITDGGVNFALES 265
Query: 262 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGTYFGGLKPRSD 320
            G   ++    ++     GK  ++G    G+    +  + +L G+++ G   G   P+  
Sbjct: 266 TGSPEILKQGVDALGI-LGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKF 324
Query: 321 IATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
           I  L + Y   +    + +    +F +IN+A     +G +L+ II
Sbjct: 325 IPELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSRKGITLKPII 368

>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From Thermotoga Maritima At 2.00 A Resolution Length = 380

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 79/355 (22%), Positives = 139/355 (39%), Gaps = 34/355 (9%)
Query: 24  IRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXXXXXXXXXXXXRDLV--- 80
           I ++IL   +C SDV  ++     P++PLP+I                       L    
Sbjct: 45  ILVEILSAGVCGSDVHMFRGED--PRVPLPIILGHEGAGRVVEVNGEKRDLNGELLKPGD 102
Query: 81  LPIFHR--DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSF 138
           L +++R   CGEC  CK SK        + Y  N    G S +  L+G           +
Sbjct: 103 LIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINR---GCSEYPHLRG----------CY 149
Query: 139 TEYSVVDI-THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXXXX 197
           + + V+D  T V+K++    L +  +  C  +T   A  +      G TV I        
Sbjct: 150 SSHIVLDPETDVLKVSEKDDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGL 209
Query: 198 XXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GAD 256
                 R   A  +I +  +P + ++ ++ G    +N      +   + I ++T G GAD
Sbjct: 210 FGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGAD 269
Query: 257 YCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE--ILKGRSVCGTYFGG 314
           +  E  G +  + +     R G G   + GV +   P+     E  +LK  +  G +   
Sbjct: 270 FILEATGDSRALLEGSELLRRG-GFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWV-- 326
Query: 315 LKPRSDIATLAQKYLDKELN---LGEFITHEVSFHDINKAFDLLLEGKSLRCIIW 366
               SD +   +       N   L + ITH +   + NKA +L+   ++L+ I++
Sbjct: 327 ----SDTSHFVKTVSITSRNYQLLSKLITHRLPLKEANKALELMESREALKVILY 377

>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 79/341 (23%), Positives = 125/341 (36%), Gaps = 44/341 (12%)
Query: 23  EIRIKILCTSLCHSDVTFWKSSTDLPKLP-LPVIFXXXXXXXXXXXXXXXXXXXXRDLV- 80
           E+ ++I    +CH+D     +  D P  P LP+I                      D V 
Sbjct: 27  EVLVRIKACGVCHTD--LHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVG 84
Query: 81  LPIFHRDCGECRDCKSSKSNTCS-KFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFT 139
           +P  +  CG C  C S +   C  +   GY  +                         + 
Sbjct: 85  IPWLYSACGHCDYCLSGQETLCEHQKNAGYSVD-----------------------GGYA 121
Query: 140 EYSVVDITHVVKITPHIPLGIACLLSC-GVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXX 198
           EY      +VVKI  ++    A  + C GV+T    A KV G + G  VAI+        
Sbjct: 122 EYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTY--KALKVTGAKPGEWVAIYGIGGLGHV 179
Query: 199 XXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYC 258
                +      ++ VDI  EK E+ K+ G    +NP     +  ++ +KE   GG    
Sbjct: 180 AVQYAK-AMGLNVVAVDIGDEKLELAKELGADLVVNPLK---EDAAKFMKEKV-GGVHAA 234
Query: 259 FECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPR 318
                       A+NS R G G  V++G+     PI +    +L G  + G+  G    R
Sbjct: 235 VVTAVSKPAFQSAYNSIRRG-GACVLVGLPPEEMPIPIFDT-VLNGIKIIGSIVG---TR 289
Query: 319 SDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGK 359
            D+    Q   + ++     I        IN+ FD +L+G+
Sbjct: 290 KDLQEALQFAAEGKVKT---IIEVQPLEKINEVFDRMLKGQ 327

>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 79/341 (23%), Positives = 125/341 (36%), Gaps = 44/341 (12%)
Query: 23  EIRIKILCTSLCHSDVTFWKSSTDLPKLP-LPVIFXXXXXXXXXXXXXXXXXXXXRDLV- 80
           E+ ++I    +CH+D     +  D P  P LP+I                      D V 
Sbjct: 27  EVLVRIKACGVCHTD--LHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVG 84
Query: 81  LPIFHRDCGECRDCKSSKSNTCS-KFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFT 139
           +P  +  CG C  C S +   C  +   GY  +                         + 
Sbjct: 85  IPWLYSACGHCDYCLSGQETLCEHQKNAGYSVD-----------------------GGYA 121
Query: 140 EYSVVDITHVVKITPHIPLGIACLLSC-GVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXX 198
           EY      +VVKI  ++    A  + C GV+T    A KV G + G  VAI+        
Sbjct: 122 EYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTY--KALKVTGAKPGEWVAIYGIGGFGHV 179
Query: 199 XXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYC 258
                +      ++ VDI  EK E+ K+ G    +NP     +  ++ +KE   GG    
Sbjct: 180 AVQYAK-AMGLNVVAVDIGDEKLELAKELGADLVVNPLK---EDAAKFMKEKV-GGVHAA 234
Query: 259 FECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPR 318
                       A+NS R G G  V++G+     PI +    +L G  + G+  G    R
Sbjct: 235 VVTAVSKPAFQSAYNSIRRG-GACVLVGLPPEEMPIPIFDT-VLNGIKIIGSIVG---TR 289
Query: 319 SDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGK 359
            D+    Q   + ++     I        IN+ FD +L+G+
Sbjct: 290 KDLQEALQFAAEGKVKT---IIEVQPLEKINEVFDRMLKGQ 327

>pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE BY EXCHANGE Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 104/243 (42%), Gaps = 23/243 (9%)
Query: 120 RFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVA 179
           +F  +K  V   F +++     + +++ H+ K    IPL  A ++   ++TG   A ++A
Sbjct: 111 KFSNVKDGVFGEFFHVND----ADMNLAHLPK---EIPLEAAVMIPDMMTTGFHGA-ELA 162
Query: 180 GVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG 239
            +E+GS+V +              +L  A +IIGV   P   E  K +G TD +N     
Sbjct: 163 DIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKN-- 220
Query: 240 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI 299
              V QV+K     G D      G +  ++ A    + G    +I  +  HGS  +L   
Sbjct: 221 GHIVDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPG---GIISNINYHGSGDALLIP 277
Query: 300 EILKGRSVCG----TYFGGLKP--RSDIATLAQKYLDKELNLGEFITHEV-SFHDINKAF 352
            +  G   CG    T  GGL P  R  +  L      K ++  + +TH    F +I KAF
Sbjct: 278 RVEWG---CGMAHKTIKGGLCPGGRLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAF 334
Query: 353 DLL 355
            L+
Sbjct: 335 MLM 337

>pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 105/243 (43%), Gaps = 23/243 (9%)
Query: 120 RFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVA 179
           +F  +K  V   F +++     + +++ H+ K    IPL  A ++   ++TG   A ++A
Sbjct: 111 KFSNVKDGVFGEFFHVND----ADMNLAHLPK---EIPLEAAVMIPDMMTTGFHGA-ELA 162
Query: 180 GVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG 239
            +++GS+V +              +L  A +IIGV   P   E  K +G TD +N     
Sbjct: 163 DIQMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKN-- 220
Query: 240 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI 299
              V QV+K     G D      G +  ++ A +  + G    +I  +  HGS  +L   
Sbjct: 221 GHIVDQVMKLTNGKGVDRVIMAGGGSETLSQAVSMVKPG---GIISNINYHGSGDALLIP 277
Query: 300 EILKGRSVCG----TYFGGLKP--RSDIATLAQKYLDKELNLGEFITHEV-SFHDINKAF 352
            +  G   CG    T  GGL P  R  +  L      K ++  + +TH    F +I KAF
Sbjct: 278 RVEWG---CGMAHKTIKGGLCPGGRLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAF 334
Query: 353 DLL 355
            L+
Sbjct: 335 MLM 337

>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 88/373 (23%), Positives = 130/373 (34%), Gaps = 66/373 (17%)
Query: 3   RIPGKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLP-LPVIFXXXXX 61
           R  GKPL             +I++ I  + +CH+D     +  D P  P  P I      
Sbjct: 32  RAFGKPLTIDEVPIPQPGPGQIQVAIQASGVCHTD--LHAAEGDWPVKPNPPFIPGHEGV 89
Query: 62  XXXXXXXXXXXXXXXRDLV-LPIFHRDCGECRDCKSSKSNTC-SKFGRGYRPNMPRDGTS 119
                           D V +P  +  CG CR C       C  +   GY  N       
Sbjct: 90  GFVSAVGSGVKHVKEGDRVGIPWLYTACGHCRHCLGGWETLCEEQLNTGYSVN------- 142
Query: 120 RFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLG-IACLLSCGVSTGVGAAWKV 178
                             F EY V D   V  +  +I    IA +L  GV+  V    KV
Sbjct: 143 ----------------GGFAEYVVADPNFVGHLPKNIDFNEIAPVLCAGVT--VYKGLKV 184
Query: 179 AGVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATC 238
              + G  V I              R      +  VDI+  K ++ ++ G T  +N  T 
Sbjct: 185 TDTKPGDWVVISGIGGLGHMAVQYARA-MGLNVAAVDIDDRKLDLARRLGATVTVNAKTV 243
Query: 239 GDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNS 298
            D   +  I++ TDGGA    + + +T+V   AF  +         LG+   G  +SLN 
Sbjct: 244 ADP--AAYIRKETDGGA----QGVLVTAVSPKAFEQA---------LGMVARGGTVSLNG 288
Query: 299 IE-----------ILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVS-FH 346
           +            +L G +V G+  G    R D+    Q+ LD   +     T +     
Sbjct: 289 LPPGDFPLSIFNMVLNGVTVRGSIVG---TRLDL----QESLDFAADGKVKATIQTGKLE 341
Query: 347 DINKAFDLLLEGK 359
           DIN  FD + +G 
Sbjct: 342 DINAIFDDMRQGN 354

>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus Horikoshii Length = 347

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 77/351 (21%), Positives = 130/351 (37%), Gaps = 40/351 (11%)
Query: 23  EIRIKILCTSLCHSDVTFWK-SSTDLPKLPLPVIFXXXXXXXXXXXXXXXXXXXXRDLVL 81
           E+ IK+L TS+C +D+  ++ +     ++  P I                      D V 
Sbjct: 30  EVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVEGIEVGDYVS 89
Query: 82  PIFHRDCGECRDCKSSKSNTCSK---FGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSF 138
              H  CG+C  C+  + + C     FG      +  DG                    F
Sbjct: 90  VETHIVCGKCYACRRGQYHVCQNTKIFG------VDTDGV-------------------F 124
Query: 139 TEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXX 198
            EY+VV   ++ K    IP   A L       G      +AG   G +V I         
Sbjct: 125 AEYAVVPAQNIWKNPKSIPPEYATLQE---PLGNAVDTVLAGPISGKSVLITGAGPLGLL 181
Query: 199 XXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADY 257
                + + A  +I  + +  + E+ KK G    INP    ++ V + + ++TDG G D 
Sbjct: 182 GIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPF---EEDVVKEVXDITDGNGVDV 238
Query: 258 CFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKP 317
             E  G    +     +     G+  +LG+      I  N++ I K  ++ G    G   
Sbjct: 239 FLEFSGAPKALEQGLQAVTPA-GRVSLLGLYPGKVTIDFNNLIIFKALTIYG--ITGRHL 295
Query: 318 RSDIATLAQKYLDKELNLGEFITHEV-SFHDINKAFDLLLEGKSLRCIIWM 367
                T+++     +LNL   ITH+   F    +AF+L   GK+ + +  +
Sbjct: 296 WETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELXRAGKTGKVVFXL 346

>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3 Length = 348

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 77/351 (21%), Positives = 130/351 (37%), Gaps = 40/351 (11%)
Query: 23  EIRIKILCTSLCHSDVTFWK-SSTDLPKLPLPVIFXXXXXXXXXXXXXXXXXXXXRDLVL 81
           E+ IK+L TS+C +D+  ++ +     ++  P I                      D V 
Sbjct: 31  EVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVEGIEVGDYVS 90
Query: 82  PIFHRDCGECRDCKSSKSNTCSK---FGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSF 138
              H  CG+C  C+  + + C     FG      +  DG                    F
Sbjct: 91  VETHIVCGKCYACRRGQYHVCQNTKIFG------VDTDGV-------------------F 125
Query: 139 TEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXX 198
            EY+VV   ++ K    IP   A L       G      +AG   G +V I         
Sbjct: 126 AEYAVVPAQNIWKNPKSIPPEYATLQE---PLGNAVDTVLAGPISGKSVLITGAGPLGLL 182
Query: 199 XXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADY 257
                + + A  +I  + +  + E+ KK G    INP    ++ V + + ++TDG G D 
Sbjct: 183 GIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPF---EEDVVKEVXDITDGNGVDV 239
Query: 258 CFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKP 317
             E  G    +     +     G+  +LG+      I  N++ I K  ++ G    G   
Sbjct: 240 FLEFSGAPKALEQGLQAVTPA-GRVSLLGLYPGKVTIDFNNLIIFKALTIYG--ITGRHL 296
Query: 318 RSDIATLAQKYLDKELNLGEFITHEV-SFHDINKAFDLLLEGKSLRCIIWM 367
                T+++     +LNL   ITH+   F    +AF+L   GK+ + +  +
Sbjct: 297 WETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELXRAGKTGKVVFXL 347

>pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The Alcohol Dehydrogenases (Adhs) Length = 352

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 102/244 (41%), Gaps = 25/244 (10%)
Query: 120 RFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVA 179
           +F  +K  V   F +++     + +++ H+ K    IPL  A ++   ++TG   A ++A
Sbjct: 111 KFSNVKDGVFGEFFHVND----ADMNLAHLPK---EIPLEAAVMIPDMMTTGFHGA-ELA 162
Query: 180 GVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG 239
            +E+G+TVA+              +L  A +II V   P   +  K +G TD +N     
Sbjct: 163 DIELGATVAVLGIGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIVN---YK 219
Query: 240 DKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNS 298
           D  +   I  +T+G G D      G   +M  A    + G     I  V   G    L+ 
Sbjct: 220 DGPIESQIMNLTEGKGVDAAIIAGGNADIMATAVKIVKPG---GTIANVNYFGEGEVLDV 276
Query: 299 IEILKGRSVCG----TYFGGLKP--RSDIATLAQKYLDKELNLGEFITHEV-SFHDINKA 351
             +  G   CG    T  GGL P  R  +  L      K ++  + +TH    F +I KA
Sbjct: 277 PRLEWG---CGMAHKTIKGGLCPGGRLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKA 333
Query: 352 FDLL 355
           F L+
Sbjct: 334 FMLM 337

>pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium Brockii Length = 352

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 101/244 (41%), Gaps = 25/244 (10%)
Query: 120 RFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVA 179
           +F  +K  V   F +++     + +++ H+ K    IPL  A ++   ++TG   A ++A
Sbjct: 111 KFSNVKDGVFGEFFHVND----ADMNLAHLPK---EIPLEAAVMIPDMMTTGFHGA-ELA 162
Query: 180 GVEVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG 239
            +E+G+TVA+              +L  A +II V   P   +  K +G TD +N     
Sbjct: 163 DIELGATVAVLGIGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIVN---YK 219
Query: 240 DKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNS 298
           D  +   I  +T+G G D      G   +M  A    + G     I  V   G    L  
Sbjct: 220 DGPIESQIMNLTEGKGVDAAIIAGGNADIMATAVKIVKPG---GTIANVNYFGEGEVLPV 276
Query: 299 IEILKGRSVCG----TYFGGLKP--RSDIATLAQKYLDKELNLGEFITHEV-SFHDINKA 351
             +  G   CG    T  GGL P  R  +  L      K ++  + +TH    F +I KA
Sbjct: 277 PRLEWG---CGMAHKTIKGGLCPGGRLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKA 333
Query: 352 FDLL 355
           F L+
Sbjct: 334 FMLM 337

>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm 44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol Length = 345

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/252 (21%), Positives = 89/252 (35%), Gaps = 25/252 (9%)
Query: 23  EIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFXXXXXXXXXXXXXXXXXXXXRDLVLP 82
           EI +K+    LCHSD+             LP+                       D V  
Sbjct: 27  EILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGVGDAVAV 86
Query: 83  IFHRDCGECRDCKSSKSNTCSKFGR-GYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEY 141
                CG C  C   + N C++    G  P  P  G+                  S  EY
Sbjct: 87  YGPWGCGACHACARGRENYCTRAADLGITP--PGLGSP----------------GSMAEY 128
Query: 142 SVVDIT-HVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXXXX 200
            +VD   H+V I    P+  A L   G++     +  +  +  GST  +           
Sbjct: 129 MIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGI 188
Query: 201 XXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCF 259
              R   A+++I VD++ ++  + ++ G     + A       +  I+E+T G GA   F
Sbjct: 189 QILRAVSAARVIAVDLDDDRLALAREVG----ADAAVKSGAGAADAIRELTGGQGATAVF 244
Query: 260 ECIGLTSVMNDA 271
           + +G  S ++ A
Sbjct: 245 DFVGAQSTIDTA 256

>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium Beijerinckii Alcohol Dehydrogenase Is Critical For Thermostabilization Length = 351

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 96/227 (42%), Gaps = 18/227 (7%)
Query: 138 FTEY-SVVDITHVVKITPH-IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXX 195
           F EY  V D    + I P  +PL  A +++  ++TG   A ++A +++GS+V +      
Sbjct: 120 FGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGA-ELADIQMGSSVVVIGIGAV 178
Query: 196 XXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGA 255
                   +L  A +IIGV   P   E  K +G TD +N        V QV+K     G 
Sbjct: 179 GLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKN--GHIVDQVMKLTNGKGV 236
Query: 256 DYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCG----TY 311
           D      G +  ++ A +  + G    +I  +  HGS  +L    +  G   CG    T 
Sbjct: 237 DRVIMAGGGSETLSQAVSMVKPG---GIISNINYHGSGDALLIPRVEWG---CGMAHKTI 290
Query: 312 FGGLKP--RSDIATLAQKYLDKELNLGEFITHEV-SFHDINKAFDLL 355
            GGL P  R     L    +   ++L + +TH    F  I +A  L+
Sbjct: 291 KGGLCPGGRLRAEMLRDMVVYNRVDLSKLVTHVYHGFDHIEEALLLM 337

>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form) Length = 351

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 96/227 (42%), Gaps = 18/227 (7%)
Query: 138 FTEY-SVVDITHVVKITPH-IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXX 195
           F EY  V D    + I P  +PL  A +++  ++TG   A ++A +++GS+V +      
Sbjct: 120 FGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGA-ELADIQMGSSVVVIGIGAV 178
Query: 196 XXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGA 255
                   +L  A +IIGV   P   E  K +G TD +N        V QV+K     G 
Sbjct: 179 GLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKN--GHIVDQVMKLTNGKGV 236
Query: 256 DYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCG----TY 311
           D      G +  ++ A +  + G    +I  +  HGS  +L    +  G   CG    T 
Sbjct: 237 DRVIMAGGGSETLSQAVSMVKPG---GIISNINYHGSGDALLIPRVEWG---CGMAHKTI 290
Query: 312 FGGLKP--RSDIATLAQKYLDKELNLGEFITHEV-SFHDINKAFDLL 355
            GGL P  R     L    +   ++L + +TH    F  I +A  L+
Sbjct: 291 KGGLCPGGRLRAEMLRDMVVYNRVDLSKLVTHVYHGFDHIEEALLLM 337

>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase (Target Psi-012003) From Sinorhizobium Meliloti 1021 Length = 370

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 87/221 (39%), Gaps = 37/221 (16%)
Query: 88  CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT 147
           CG C  C++ + N C                   R L+   IH       F EY +V   
Sbjct: 111 CGRCPQCQAGRVNLC-------------------RNLRAIGIHRD---GGFAEYVLVPRK 148
Query: 148 HVVKITPHI-PL-GIAC-LLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXXXXXXXR 204
              +I   + P+ G  C  L+C +         ++G++ GSTVAI              R
Sbjct: 149 QAFEIPLTLDPVHGAFCEPLACCLH-----GVDLSGIKAGSTVAILGGGVIGLLTVQLAR 203
Query: 205 LNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIK---EMTDGGADYCFEC 261
           L  A+ +I       K  + ++ G T  ++P + GD  V + I     +  GG D   EC
Sbjct: 204 LAGATTVILSTRQATKRRLAEEVGATATVDP-SAGD--VVEAIAGPVGLVPGGVDVVIEC 260
Query: 262 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL 302
            G+   +  +   ++ G G  VILGV   G  + +   +IL
Sbjct: 261 AGVAETVKQSTRLAKAG-GTVVILGVLPQGEKVEIEPFDIL 300

>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii: Crystal Structure Of Mutant With Enhanced Thermal Stability Length = 351

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 94/227 (41%), Gaps = 18/227 (7%)
Query: 138 FTEY-SVVDITHVVKITPH-IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXX 195
           F EY  V D    + I P  +PL  A +++  ++TG   A ++A +E+GS+V +      
Sbjct: 120 FGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIGIGAV 178
Query: 196 XXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGA 255
                   +L  A +IIGV   P   E  K +G TD +N          QV+K     G 
Sbjct: 179 GLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKN--GHIEDQVMKLTNGKGV 236
Query: 256 DYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCG----TY 311
           D      G +  ++ A    + G    +I  +  HGS  +L    +  G   CG    T 
Sbjct: 237 DRVIMAGGGSETLSQAVKMVKPG---GIISNINYHGSGDALLIPRVEWG---CGMAHKTI 290
Query: 312 FGGLKP--RSDIATLAQKYLDKELNLGEFITHEV-SFHDINKAFDLL 355
            GGL P  R     L    +   ++L + +TH    F  I +A  L+
Sbjct: 291 KGGLCPGGRLRAERLRDMVVYNRVDLSKLVTHVYHGFDHIEEALLLM 337

>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 81/363 (22%), Positives = 130/363 (35%), Gaps = 54/363 (14%)
Query: 6   GKPLXXXXXXXXXXKAWEIRIKILCTSLCHSDVTFWKSSTDLP-KLPLPVIFXXXXXXXX 64
           G PL             ++ +KI  + +CH+D     +  D P K PLP I         
Sbjct: 16  GAPLRIEEVKVPLPGPGQVLVKIEASGVCHTD--LHAAEGDWPVKPPLPFIPGHEGVGYV 73
Query: 65  XXXXXXXXXXXXRDLV-LPIFHRDCGECRDCKSSKSNTC-SKFGRGYRPNMPRDGTSRFR 122
                        D V +P  +  CG C  C +     C S+   GY  N          
Sbjct: 74  AAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVN---------- 123
Query: 123 ELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLG-IACLLSCGVSTGVGAAWKVAGV 181
                          + EY + D  +V  +  ++    IA +L  GV+   G   K    
Sbjct: 124 -------------GGYAEYVLADPNYVGILPKNVEFAEIAPILCAGVTVYKG--LKQTNA 168
Query: 182 EVGSTVAIFXXXXXXXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 241
             G  VAI              R      +  +DI+  K E+ +K G +  +N     + 
Sbjct: 169 RPGQWVAISGIGGLGHVAVQYAR-AMGLHVAAIDIDDAKLELARKLGASLTVNARQ--ED 225
Query: 242 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNS----SREGWGKTVILGVEMHGSPISLN 297
            V  + +++  GGA        +T+V N AF      +R G G   ++G+     P  + 
Sbjct: 226 PVEAIQRDI--GGAHGVL----VTAVSNSAFGQAIGMARRG-GTIALVGLPPGDFPTPIF 278
Query: 298 SIEILKGRSVCGTYFGGLKPRSDIATLAQKYLD-KELNLGEFITHEVSFHDINKAFDLLL 356
            + +LKG  + G+  G    R+D+    Q+ LD     L +   H     DIN+  D + 
Sbjct: 279 DV-VLKGLHIAGSIVG---TRADL----QEALDFAGEGLVKATIHPGKLDDINQILDQMR 330
Query: 357 EGK 359
            G+
Sbjct: 331 AGQ 333

>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The Hyperthermophilic Archaeon Thermococcus Kodakaraensis Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 72/353 (20%), Positives = 128/353 (36%), Gaps = 40/353 (11%)
Query: 23  EIRIKILCTSLCHSDVTFWK-SSTDLPKLPLPVIFXXXXXXXXXXXXXXXXXXXXRDLVL 81
           E+ IK+L TS+C +D+  ++ +     ++  P I                      D + 
Sbjct: 31  EVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEVGPGVEDLQVGDYIS 90
Query: 82  PIFHRDCGECRDCKSSKSNTCSK---FGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSF 138
              H  CG+C  CK ++ + C     FG      +  DG                    F
Sbjct: 91  VETHIVCGKCYACKHNRYHVCQNTKIFG------VDMDGV-------------------F 125
Query: 139 TEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXX 198
             Y++V   +  K    +P   A L       G      +AG   G +  I         
Sbjct: 126 AHYAIVPAKNAWKNPKDMPPEYAALQE---PLGNAVDTVLAGPIAGRSTLITGAGPLGLL 182
Query: 199 XXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADY 257
                + + A  +I  + +  + ++ KK G    +NP    ++   + + ++TDG G + 
Sbjct: 183 GIAVAKASGAYPVIVSEPSEFRRKLAKKVGADYVVNPF---EEDPVKFVMDITDGAGVEV 239
Query: 258 CFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKP 317
             E  G    +     +   G G+  +LG+      I  N++ I K   V G    G   
Sbjct: 240 FLEFSGAPKALEQGLKAVTPG-GRVSLLGLFPREVTIDFNNLIIFKALEVHG--ITGRHL 296
Query: 318 RSDIATLAQKYLDKELNLGEFITHEV-SFHDINKAFDLLLEGKSLRCIIWMDK 369
                T++      +LNL   ITH+   F    +AF+L+  GK+ + + +  K
Sbjct: 297 WETWYTVSSLIQSGKLNLDPIITHKYKGFDKFEEAFELMRAGKTGKVVFFPHK 349

>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Length = 343

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 64/344 (18%), Positives = 119/344 (34%), Gaps = 32/344 (9%)
Query: 23  EIRIKILCTSLCHSDVTFWK-SSTDLPKLPLPVIFXXXXXXXXXXXXXXXXXXXXRDLVL 81
           EI +++   S+C +D+  WK  +    ++  P++                      D V 
Sbjct: 27  EILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQVGDHVS 86
Query: 82  PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEY 141
              H  C  C  C++   + C          + RDG                    F EY
Sbjct: 87  LESHIVCHACPACRTGNYHVCLNT---QILGVDRDG-------------------GFAEY 124
Query: 142 SVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXXXXXXXX 201
            VV   +       +P  +A +L       V   +  +GV  G +V I            
Sbjct: 125 VVVPAENAWVNPKDLPFEVAAILEP-FGNAVHTVYAGSGVS-GKSVLITGAGPIGLMAAM 182
Query: 202 XXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 261
             R + A  I+  D NP +    + +     +NP    ++ + +V++ +T  G +   E 
Sbjct: 183 VVRASGAGPILVSDPNPYRLAFARPYA-DRLVNPL---EEDLLEVVRRVTGSGVEVLLEF 238
Query: 262 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDI 321
            G  + ++    +   G G+  ILG+     PI  +    L  R +      G +     
Sbjct: 239 SGNEAAIHQGLMALIPG-GEARILGIP--SDPIRFDLAGELVMRGITAFGIAGRRLWQTW 295
Query: 322 ATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365
                      ++L   +TH +      +AF LL  G++++ I+
Sbjct: 296 MQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLLASGQAVKVIL 339

>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of C. Beijerinckii Adh By T. Brockii Adh Length = 351

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 7/144 (4%)
Query: 138 FTEY-SVVDITHVVKITPH-IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFXXXXX 195
           F EY  V D    + I P  +PL  A +++  ++TG   A ++A +E+G+TVA+      
Sbjct: 120 FGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGA-ELADIELGATVAVLGIGPV 178
Query: 196 XXXXXXXXRLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-G 254
                   +L  A +II V   P   +  K +G TD +N     D  +   I  +T+G G
Sbjct: 179 GLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIVN---YKDGPIESQIMNLTEGKG 235
Query: 255 ADYCFECIGLTSVMNDAFNSSREG 278
            D      G   +M  A    + G
Sbjct: 236 VDAAIIAGGNADIMATAVKIVKPG 259

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	371
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	0.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	0.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	0.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	0.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	0.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	1e-149
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	1e-135
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	2e-73
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	4e-64
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	4e-64
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	7e-63
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	8e-63
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	3e-60
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	6e-60
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	1e-59
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	2e-59
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	2e-58
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	9e-58
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	2e-54
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	5e-54
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	5e-50
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	6e-47
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	3e-46
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	1e-45
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	8e-45
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	4e-37
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	1e-35
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	3e-28
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	2e-25
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	3e-24
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	2e-21
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	2e-20
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	5e-18
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	6e-18
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	1e-17
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	2e-17
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	3e-17
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	7e-17
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	8e-16
3gms_A	340	Putative NADPH:quinone reductase; structural genom	4e-15
4eye_A	342	Probable oxidoreductase; structural genomics, niai	1e-12
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	3e-12
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	2e-11
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	2e-11
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	1e-10
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	1e-10
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	3e-10
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	2e-09
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	6e-09
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	1e-08
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	1e-08
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	2e-07
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	2e-07
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	3e-05
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	5e-05
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	7e-05
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	4e-04
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	6e-04

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score =  530 bits (1369), Expect = 0.0
 Identities = 170/363 (46%), Positives = 228/363 (62%), Gaps = 4/363 (1%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
            GKPL IEEIEV PPKA E+RIKI+ T++CH+D      S   P+   PVI GH   G+V
Sbjct: 15  AGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTL--SGADPEGCFPVILGHLGAGIV 72

Query: 65  ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFREL 124
           ESVGE V ++K  D V+P++   CGEC+ C + K+N C K        +  DGTSRF   
Sbjct: 73  ESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFT-C 131

Query: 125 KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVG 184
           KG  I H++  S+F+EY+VV    V KI P  PL   CLL CG+STG GAA   A +E G
Sbjct: 132 KGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPG 191

Query: 185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVS 244
           S  A+FGLG VGLAV  G ++  AS+IIGVDIN +KF   K+FG T+ INP     K + 
Sbjct: 192 SVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDF-SKPIQ 250

Query: 245 QVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKG 304
           +V+ EMTDGG DY FECIG   VM  A  +  +GWG +V++GV   G  I+    +++ G
Sbjct: 251 EVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTG 310

Query: 305 RSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCI 364
           R+  GT FGG K    +  L  +Y+ K++ + EF+TH +SF +INKAF+L+  GKS+R +
Sbjct: 311 RTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKSIRTV 370

Query: 365 IWM 367
           + +
Sbjct: 371 VKI 373

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score =  515 bits (1329), Expect = 0.0
 Identities = 160/363 (44%), Positives = 219/363 (60%), Gaps = 5/363 (1%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
             KPLVIEEIEV+ P A EIRIKI+ T +CH+D+          K   PV+ GHE  G+V
Sbjct: 17  ANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHL--FEGKHKDGFPVVLGHEGAGIV 74

Query: 65  ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFREL 124
           ESVG  V E +  + V+P+F   CGECR C+S K+N C K      P++     +RF   
Sbjct: 75  ESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFT-C 133

Query: 125 KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVG 184
           KG  +  FL  S+F++Y+VV+   V KI P  PL   CLL CGVSTG GAA   A VE G
Sbjct: 134 KGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPG 193

Query: 185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVS 244
           ST A+FGLGAVGLA   G     A +II VD+NP+KFE  K FG TDF+NP     + +S
Sbjct: 194 STCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDH-SEPIS 252

Query: 245 QVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKG 304
           QV+ +MT+GG D+  EC+G   VM +A  S  +GWG +V++G       ++   I+++ G
Sbjct: 253 QVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGW-TDLHDVATRPIQLIAG 311

Query: 305 RSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCI 364
           R+  G+ FGG K +  +  + + YLDK++ L EFITH +    +N A DL+  GK +R +
Sbjct: 312 RTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKCIRTV 371

Query: 365 IWM 367
           + +
Sbjct: 372 LSL 374

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score =  513 bits (1323), Expect = 0.0
 Identities = 161/361 (44%), Positives = 216/361 (59%), Gaps = 5/361 (1%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
             KP  IEE+EV PPKA E+RIK++ T +C SD      S  L   PLPVI GHEA G+V
Sbjct: 17  EKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVV--SGTLVT-PLPVIAGHEAAGIV 73

Query: 65  ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFREL 124
           ES+GE V  V+  D V+P+F   CG+CR CK  + N C K          +DGTSRF   
Sbjct: 74  ESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFT-C 132

Query: 125 KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVG 184
           +G  IHHFL  S+F++Y+VVD   V KI    PL   CL+ CG STG G+A KVA V  G
Sbjct: 133 RGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQG 192

Query: 185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVS 244
           ST A+FGLG VGL+V  G +   A++IIGVDIN +KF   K+ G T+ +NP     K + 
Sbjct: 193 STCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDY-KKPIQ 251

Query: 245 QVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKG 304
           +V+ EM++GG D+ FE IG    M  A +  +E +G +VI+GV      +S+N + +L G
Sbjct: 252 EVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSG 311

Query: 305 RSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCI 364
           R+  G  FGG K +  +  L   ++ K+  L   ITH + F  IN+ FDLL  G+S+R I
Sbjct: 312 RTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTI 371

Query: 365 I 365
           +
Sbjct: 372 L 372

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score =  512 bits (1322), Expect = 0.0
 Identities = 146/365 (40%), Positives = 204/365 (55%), Gaps = 11/365 (3%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
            G PL IEEIEV PPKA E+RI+++ T +C +D+          K   PV+ GHE  G+V
Sbjct: 17  TGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK---KKALFPVVLGHECAGIV 73

Query: 65  ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPN----MPRDGTSR 120
           ESVG  V   K  D V+P F   C  C+ C S  +N C K      P     +  D TSR
Sbjct: 74  ESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSR 133

Query: 121 FRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAG 180
           F   KG  I+HF+ +SSF++Y+VV   ++ ++     L   CL+ CG S+G GAA   A 
Sbjct: 134 FT-CKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAK 192

Query: 181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 240
           V  GST A+FGLG VGL+   G ++  AS+II +DIN EKF   K  G TD +NP    D
Sbjct: 193 VTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPREL-D 251

Query: 241 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE 300
           K V  VI E+T GG DY  +C G    +  A + +  GWG   ++G       +++ +++
Sbjct: 252 KPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGA--KVDEMTIPTVD 309

Query: 301 ILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS 360
           ++ GRS+ GT+FGG K    +  L   Y +K+ +L   +TH + F  IN A DL+ EGKS
Sbjct: 310 VILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGKS 369

Query: 361 LRCII 365
           +R I+
Sbjct: 370 IRTIL 374

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score =  511 bits (1318), Expect = 0.0
 Identities = 155/361 (42%), Positives = 213/361 (59%), Gaps = 7/361 (1%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
           P KPL +E I V PPKA E+RIKIL + +C SD +       +P    PVI GHEAVGVV
Sbjct: 18  PHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVL--KEIIPS-KFPVILGHEAVGVV 74

Query: 65  ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFREL 124
           ES+G  V  VK  D V+P+F   CG CR CKSS SN C K   G +  +  D TSRF   
Sbjct: 75  ESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFT-C 133

Query: 125 KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVG 184
           +G  I++ +  S+FTEY+VV    V KI P  PL  +CL+ CG +TG GAA   A V  G
Sbjct: 134 RGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLE-SCLIGCGFATGYGAAVNTAKVTPG 192

Query: 185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVS 244
           ST A+FGLG VG +   G +   AS+IIGV  + +KF    + G T+ +NP    DK + 
Sbjct: 193 STCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDY-DKPIY 251

Query: 245 QVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKG 304
           +VI E T+GG DY  EC G    M +A  S+  G G TV+LG+      + L+ + +L G
Sbjct: 252 EVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTG 311

Query: 305 RSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCI 364
           RS+ G+ FGG K   +++ L   Y+ K++N+   ++ +++   INKAF+LL  G+ +R I
Sbjct: 312 RSLKGSVFGGFKGE-EVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQGVRSI 370

Query: 365 I 365
           +
Sbjct: 371 M 371

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score =  425 bits (1095), Expect = e-149
 Identities = 101/369 (27%), Positives = 173/369 (46%), Gaps = 19/369 (5%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
            G    ++ +++  P+  E+ +K++ T +CH+D+         P  PLP + GHE  G++
Sbjct: 15  KGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVR--DQKYPV-PLPAVLGHEGSGII 71

Query: 65  ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKF----GRGYRPNMPRDGTSR 120
           E++G  V E++  D V+  +   CG+C  C +     CS+F      G       +G   
Sbjct: 72  EAIGPNVTELQVGDHVVLSYG-YCGKCTQCNTGNPAYCSEFFGRNFSGADS----EGNHA 126

Query: 121 FREL-KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVA 179
                +G V  HF   SSF  Y++    + VK+T  +P+ +   L CG+ TG GA     
Sbjct: 127 LCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQTGAGACINAL 186

Query: 180 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG 239
            V   S+   +G GAVGL+    A++  AS II VDI   + E+ K+ G T  IN     
Sbjct: 187 KVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSK--- 243

Query: 240 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI 299
            +     IKE+TDGG ++  E  G   ++    ++     GK  ++G    G+    +  
Sbjct: 244 TQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQLGTTAQFDVN 302

Query: 300 EIL-KGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEG 358
           ++L  G+++ G   G   P+  I  L + Y   +    + +    +F +IN+A     +G
Sbjct: 303 DLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSRKG 361

Query: 359 KSLRCIIWM 367
            +L+ II +
Sbjct: 362 ITLKPIIKI 370

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score =  389 bits (1001), Expect = e-135
 Identities = 94/373 (25%), Positives = 158/373 (42%), Gaps = 28/373 (7%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
             +PLV +E E+       I ++IL   +C SDV  ++   + P++PLP+I GHE  G V
Sbjct: 26  FNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRG--EDPRVPLPIILGHEGAGRV 83

Query: 65  ESVGEYV-----EEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTS 119
             V         E +K  DL++      CGEC  CK SK        + Y  N    G S
Sbjct: 84  VEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGIN---RGCS 140

Query: 120 RFRELKGDVIHHFLNISSFTEYSVVDI-THVVKITPHIPLGIACLLSCGVSTGVGAAWKV 178
            +  L+G           ++ + V+D  T V+K++    L +  +  C  +T   A  + 
Sbjct: 141 EYPHLRG----------CYSSHIVLDPETDVLKVSEKDDLDVLAMAMCSGATAYHAFDEY 190

Query: 179 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATC 238
                G TV I G G +GL     AR   A  +I +  +P + ++ ++ G    +N    
Sbjct: 191 PESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRET 250

Query: 239 GDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLN 297
             +   + I ++T G GAD+  E  G +  + +     R G G   + GV +   P+   
Sbjct: 251 SVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGVAVPQDPVPFK 309

Query: 298 SIE--ILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLL 355
             E  +LK  +  G +       S               L + ITH +   + NKA +L+
Sbjct: 310 VYEWLVLKNATFKGIWVSD---TSHFVKTVSITSRNYQLLSKLITHRLPLKEANKALELM 366

Query: 356 LEGKSLRCIIWMD 368
              ++L+ I++ +
Sbjct: 367 ESREALKVILYPE 379

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score =  230 bits (589), Expect = 2e-73
 Identities = 79/359 (22%), Positives = 134/359 (37%), Gaps = 35/359 (9%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
            G   V+ +I    P   EI +K+    LCHSD+             LP+  GHE VG V
Sbjct: 9   IGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTV 68

Query: 65  ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTC--SKFGRGYRPNMPRDGTSRFR 122
             +GE V      D V       CG C  C   + N C  +       P +   G+    
Sbjct: 69  AELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGS---- 124

Query: 123 ELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI-PLGIACLLSCGVSTGVGAAWKVAGV 181
                            EY +VD    +     + P+  A L   G++     +  +  +
Sbjct: 125 ---------------MAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISRVLPLL 169

Query: 182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 241
             GST  + G+G +G    +  R   A+++I VD++ ++  + ++ G    +        
Sbjct: 170 GPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKS----GA 225

Query: 242 TVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE 300
             +  I+E+T G GA   F+ +G  S ++ A        G   ++G+           + 
Sbjct: 226 GAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVD-GHISVVGIHAGAHAKVGFFM- 283

Query: 301 ILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGK 359
           I  G SV   Y+G    RS++  +        L++    T   +  +   A+  L EG 
Sbjct: 284 IPFGASVVTPYWG---TRSELMEVVALARAGRLDI---HTETFTLDEGPAAYRRLREGS 336

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score =  207 bits (528), Expect = 4e-64
 Identities = 82/374 (21%), Positives = 140/374 (37%), Gaps = 56/374 (14%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPK-LPLPVIFGHEAVGV 63
           P + L + +  V  P   EI +++   S+C +D+  WK        +  P++ GHE  GV
Sbjct: 9   PEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGV 68

Query: 64  VESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNM-----PRDGT 118
           VE+VG  V   +  D V    H  C  C  C++   + C         N       RDG 
Sbjct: 69  VEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVC--------LNTQILGVDRDGG 120

Query: 119 SRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LSCGVSTGVGAA 175
                              F EY VV   +       +P  +A +       V       
Sbjct: 121 -------------------FAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAV-----HT 156

Query: 176 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 235
                   G +V I G G +GL  A   R + A  I+  D NP +    + +     +NP
Sbjct: 157 VYAGSGVSGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYA-DRLVNP 215

Query: 236 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS 295
               ++ + +V++ +T  G +   E  G  + ++    +   G G+  ILG+        
Sbjct: 216 L---EEDLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPG-GEARILGIPSDPIRFD 271

Query: 296 LNSIEILKGRSVCGTYFGGLKPRSD----IATLAQKYLDKELNLGEFITHEVSFHDINKA 351
           L    +++G +  G    G +         A +    +D    L   +TH +      +A
Sbjct: 272 LAGELVMRGITAFGIA--GRRLWQTWMQGTALVYSGRVD----LSPLLTHRLPLSRYREA 325

Query: 352 FDLLLEGKSLRCII 365
           F LL  G++++ I+
Sbjct: 326 FGLLASGQAVKVIL 339

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score =  207 bits (529), Expect = 4e-64
 Identities = 73/365 (20%), Positives = 133/365 (36%), Gaps = 47/365 (12%)

Query: 9   LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG 68
           + +  + +  P   ++ +K+    +C +D               PV  GHE  G+V   G
Sbjct: 35  ISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFPSTP---PVTLGHEFCGIVVEAG 91

Query: 69  EYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKF-GRGYRPNMPRDGTSRFRELKGD 127
             V ++     +    +  CG C  C++ + N C      G      RDG          
Sbjct: 92  SAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGI----HRDG---------- 137

Query: 128 VIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LSCGVSTGVGAAWKVAGVEVG 184
                     F EY +V      +I   +          L+C +         ++G++ G
Sbjct: 138 ---------GFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCL-----HGVDLSGIKAG 183

Query: 185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVS 244
           STVAI G G +GL   + ARL  A+ +I       K  + ++ G T  ++P+      V 
Sbjct: 184 STVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPS---AGDVV 240

Query: 245 QVIKEMTDG---GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI 301
           + I         G D   EC G+   +  +   ++ G G  VILGV   G  + +   +I
Sbjct: 241 EAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAG-GTVVILGVLPQGEKVEIEPFDI 299

Query: 302 L-KGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS 360
           L +   V G++      R     +A   ++    +   I+  +S  +             
Sbjct: 300 LFRELRVLGSFINPFVHRRAADLVATGAIE----IDRMISRRISLDEAPDVISNPAAAGE 355

Query: 361 LRCII 365
           ++ ++
Sbjct: 356 VKVLV 360

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score =  203 bits (519), Expect = 7e-63
 Identities = 95/376 (25%), Positives = 151/376 (40%), Gaps = 58/376 (15%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWK-SSTDLPKLPLPVIFGHEAVGV 63
           PG    + E++V  P   E+ IK+L TS+C +D+  ++ +     ++  P I GHE  G 
Sbjct: 13  PGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGE 72

Query: 64  VESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNM-----PRDGT 118
           V  +G  VE ++  D V    H  CG+C  C+  + + C         N        DG 
Sbjct: 73  VVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVC--------QNTKIFGVDTDGV 124

Query: 119 SRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LSCGVSTGVGAA 175
                              F EY+VV   ++ K    IP   A L   L   V T     
Sbjct: 125 -------------------FAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNAVDT----- 160

Query: 176 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 235
             +AG   G +V I G G +GL     A+ + A  +I  + +  + E+ KK G    INP
Sbjct: 161 -VLAGPISGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINP 219

Query: 236 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPI 294
               ++ V + + ++TDG G D   E  G    +     +     G+  +LG+      I
Sbjct: 220 F---EEDVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPA-GRVSLLGLYPGKVTI 275

Query: 295 SLNSIEILKGRSVCGTYFGGLKPRSD----IATLAQKYLDKELNLGEFITHEVS-FHDIN 349
             N++ I K  ++ G    G             L    L+    L   ITH+   F    
Sbjct: 276 DFNNLIIFKALTIYGIT--GRHLWETWYTVSRLLQSGKLN----LDPIITHKYKGFDKYE 329

Query: 350 KAFDLLLEGKSLRCII 365
           +AF+L+  GK+ + + 
Sbjct: 330 EAFELMRAGKTGKVVF 345

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score =  204 bits (520), Expect = 8e-63
 Identities = 73/365 (20%), Positives = 141/365 (38%), Gaps = 48/365 (13%)

Query: 5   PGKPLVIEEIEV-EPPKAWEIRIKILCTSLCHSDVTFWK-SSTDLPKLPLPVIFGHEAVG 62
             KPL IE+++       +++ ++I    +CH+D+   +    +L +  LP   GHE VG
Sbjct: 24  YNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVG 83

Query: 63  VVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFG-RGYRPNMPRDGTSRF 121
            +E V E VE +++ D V+       G C  C++ +   C      G       DG    
Sbjct: 84  YIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLN----IDGG--- 136

Query: 122 RELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI---ACLLSCGVSTGVGAAWKV 178
                           F E+       V+K+   I          L+    T   A  K 
Sbjct: 137 ----------------FAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAV-KK 179

Query: 179 AGVEV--GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 236
           A   +  G+ VAI G+G +G    +  ++   + +I +D+  EK ++ ++ G    ++  
Sbjct: 180 AARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDA- 238

Query: 237 TCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS 295
               +   + + E+T G G +   + +G  + ++          G+ +I+G    G  + 
Sbjct: 239 ---RRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRM-GRLIIVGY---GGELR 291

Query: 296 LNSIE-ILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDL 354
             +I  I    S  G+  G      ++  L    L  ++ +           +IN   + 
Sbjct: 292 FPTIRVISSEVSFEGSLVG---NYVELHELVTLALQGKVRV---EVDIHKLDEINDVLER 345

Query: 355 LLEGK 359
           L +G+
Sbjct: 346 LEKGE 350

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score =  196 bits (501), Expect = 3e-60
 Identities = 71/368 (19%), Positives = 132/368 (35%), Gaps = 57/368 (15%)

Query: 9   LVIEEIEV-EPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESV 67
           + + E  + E     E+R+KI  + LC SD+     +        P+  GHE  G +++V
Sbjct: 12  VRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKN---GAHYYPITLGHEFSGYIDAV 68

Query: 68  GEYVEEVKERDLVL--PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNM-----PRDGTSR 120
           G  V+++   D V   P+    C  C +C     + C                 RDG   
Sbjct: 69  GSGVDDLHPGDAVACVPLLP--CFTCPECLKGFYSQC--------AKYDFIGSRRDGG-- 116

Query: 121 FRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LSCGVSTGVGAAWK 177
                            F EY VV   +V  +   +P+        ++ G+      A+ 
Sbjct: 117 -----------------FAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGL-----HAFH 154

Query: 178 VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPAT 237
           +A       V I G G +GL   + A    A  +  +DI+ EK  + K FG     N + 
Sbjct: 155 LAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSS- 213

Query: 238 CGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISL 296
             + +  Q+   + +        E  G+   +  A   +     +  ++G       ++ 
Sbjct: 214 --EMSAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPH-AQLALVGTLHQDLHLTS 270

Query: 297 NSIE--ILKGRSVCGT--YFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAF 352
            +    + K  +V G+   +    P  +  T ++   +++L+L   I H  SF    +A 
Sbjct: 271 ATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAV 330

Query: 353 DLLLEGKS 360
             +     
Sbjct: 331 RDIARNAM 338

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score =  197 bits (504), Expect = 6e-60
 Identities = 74/388 (19%), Positives = 121/388 (31%), Gaps = 61/388 (15%)

Query: 6   GKPLVIEEIEV-EPPKAWEIRIKILCTSLCHSDV-----TFWKSSTDLPKLPLPVIFGHE 59
              + +EE+      K  EI IK+    +C SDV                   PV  GHE
Sbjct: 39  YPEVRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHE 98

Query: 60  AVGVVESVGEYVEEVKER------DLVLPIFHRDCGECRDCKSSKSNTCSKF-GRGYRPN 112
             GVV   G      +        + V       CG CR C     N C      G+   
Sbjct: 99  FSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNELGF--- 155

Query: 113 MPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI-------TPHIPLGIACL-- 163
              DG                    F EY  VD  +   +                 L  
Sbjct: 156 -NVDGA-------------------FAEYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVE 195

Query: 164 -LSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFE 222
             S   +       +  G+  G  V I G G +GLA     +   ASK+I  + +  +  
Sbjct: 196 PTSVAYN---AVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRN 252

Query: 223 IGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNS----SRE 277
           + K+ G    I+P     +   + + + T+G GA    E  G+  ++          +R 
Sbjct: 253 LAKELGADHVIDPT---KENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARG 309

Query: 278 GWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGE 337
                 I+       P++      ++   + G+   G              +   +++ +
Sbjct: 310 INATVAIVARADAKIPLTGEVF-QVRRAQIVGSQ--GHSGHGTFPR-VISLMASGMDMTK 365

Query: 338 FITHEVSFHDINKAFDLLLEGKSLRCII 365
            I+  VS  +I +    L   KSL  + 
Sbjct: 366 IISKTVSMEEIPEYIKRLQTDKSLVKVT 393

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score =  195 bits (498), Expect = 1e-59
 Identities = 70/375 (18%), Positives = 143/375 (38%), Gaps = 56/375 (14%)

Query: 9   LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKS-STDLPKLPLPVIFGHEAVGVVESV 67
           L +E   +  P   E+ +++    +C SDV +W+        +  P++ GHEA G VE V
Sbjct: 19  LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKV 78

Query: 68  GEYVEEVKERDLVL--PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNM------PRDGTS 119
           G  V+ +K  D V   P           CK  + N          P++      P DG  
Sbjct: 79  GSSVKHLKPGDRVAIEPGAP--RENDEFCKMGRYNLS--------PSIFFCATPPDDGN- 127

Query: 120 RFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LSCGVSTGVGAAW 176
                                +   +     K+  ++      L   LS G+      A 
Sbjct: 128 ------------------LCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGI-----HAC 164

Query: 177 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 236
           +  GV +G  V + G G +G+     A+   A++++  D++  +    K+ G    +  +
Sbjct: 165 RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQIS 224

Query: 237 TCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISL 296
               + +++ ++       +   EC G  + +     ++R G G  V++G  +     ++
Sbjct: 225 KESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVG--LGSEMTTV 281

Query: 297 NSIEI-LKGRSVCGTY-FGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDL 354
             +   ++   + G + +    P + I+ LA K ++    +   +TH        +AF+ 
Sbjct: 282 PLLHAAIREVDIKGVFRYCNTWPVA-ISMLASKSVN----VKPLVTHRFPLEKALEAFET 336

Query: 355 LLEGKSLRCIIWMDK 369
             +G  L+ ++  D 
Sbjct: 337 FKKGLGLKIMLKCDP 351

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score =  194 bits (496), Expect = 2e-59
 Identities = 75/361 (20%), Positives = 137/361 (37%), Gaps = 43/361 (11%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
             +PL IE++ +  P+  E+ I+I    +C +D+  WK         LP+I GHE  G +
Sbjct: 12  FSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTI 71

Query: 65  ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSK-FGRGYRPNMPRDGTSRFRE 123
             VGE + +VK+ D V+         CR C+  K N C      G       +G      
Sbjct: 72  VEVGE-LAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQT----TNG------ 120

Query: 124 LKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGA---AWKVAG 180
                         F+EY +V  +  +     +    A  L+   +T +GA   A     
Sbjct: 121 -------------GFSEYMLVKSSRWLVKLNSLSPVEAAPLADAGTTSMGAIRQALPFIS 167

Query: 181 VEVGSTVAIFGLGAVG-LAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG 239
                 V + G+G +    +     L +   I+G+  + +  +   + G           
Sbjct: 168 KFAEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEM---- 223

Query: 240 DKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNS 298
            K    +I ++TDG GA    + +G      +      +  G  +++G+E     +    
Sbjct: 224 -KDAESLINKLTDGLGASIAIDLVGTEETTYNLGKLLAQE-GAIILVGMEGKRVSLEAFD 281

Query: 299 IEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEG 358
              +  + + G+ +G     +D+  + +     ++        +V   DINKAF  L EG
Sbjct: 282 T-AVWNKKLLGSNYG---SLNDLEDVVRLSESGKIKP---YIIKVPLDDINKAFTNLDEG 334

Query: 359 K 359
           +
Sbjct: 335 R 335

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score =  192 bits (490), Expect = 2e-58
 Identities = 84/364 (23%), Positives = 139/364 (38%), Gaps = 43/364 (11%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWK------SSTDLPKLPLPVIFGH 58
            GKPL ++EI V  PK  ++ IK+    +CHSDV   +         +   + LPV  GH
Sbjct: 9   IGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGH 68

Query: 59  EAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSK-FGRGYRPNMPRDG 117
           E  G +E VG+ V    + DLV     +  G C  C+  + + C      G       DG
Sbjct: 69  EIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGIN----FDG 124

Query: 118 TSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWK 177
                              ++ EY +V     +     +    A  L+C   T   A  +
Sbjct: 125 -------------------AYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAV-R 164

Query: 178 VAGVEVGSTVAIFG-LGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 236
            A ++   T+ + G  G +G    + A+    + IIGVD+  E  E  K+ G    IN +
Sbjct: 165 KASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINAS 224

Query: 237 TCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS 295
               +     I+ +T+  G D   +       ++    +  +  GK V++G+        
Sbjct: 225 ---MQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGLFGADLHYH 280

Query: 296 LNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLL 355
              I  L      G+  G    +SD   + +  L +   +   IT  +   + N+A D L
Sbjct: 281 APLI-TLSEIQFVGSLVG---NQSDFLGIMR--LAEAGKVKPMITKTMKLEEANEAIDNL 334

Query: 356 LEGK 359
              K
Sbjct: 335 ENFK 338

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score =  190 bits (486), Expect = 9e-58
 Identities = 77/372 (20%), Positives = 129/372 (34%), Gaps = 54/372 (14%)

Query: 3   RIPGKPLVIEEIEVEP-PKAWEIRIKILCTSLCHSDVTFWKS-STDLPKLPLPVIFGHEA 60
            I      +E ++     K  E+ + +  T +C SDV FWK        +    + GHE+
Sbjct: 21  WISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHES 80

Query: 61  VGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNM------P 114
            G V +V   V+ +K  D V       C  C  C + + N C          +      P
Sbjct: 81  AGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGC--------ERVDFLSTPP 132

Query: 115 RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LSCGVSTG 171
             G                       Y         KI  ++      +   LS  +   
Sbjct: 133 VPGL-------------------LRRYVNHPAVWCHKI-GNMSYENGAMLEPLSVAL--- 169

Query: 172 VGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD 231
             A  + AGV +G  V I G G +GL     A+   A  ++  DI+  + +  K+     
Sbjct: 170 --AGLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEV 227

Query: 232 FINPATCGD-KTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM 289
             +       +  ++ I E   G       EC G+ S +  A  + + G GK  ++GV  
Sbjct: 228 VTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFG-GKVFVIGVGK 286

Query: 290 HGSPISLNSIEILKGRSVCGTY-FGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDI 348
           +   I       ++   +   Y +    PR+ I  +    +D    L   +TH     D 
Sbjct: 287 NEIQIPFMRA-SVREVDLQFQYRYCNTWPRA-IRLVENGLVD----LTRLVTHRFPLEDA 340

Query: 349 NKAFDLLLEGKS 360
            KAF+   + K+
Sbjct: 341 LKAFETASDPKT 352

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score =  182 bits (463), Expect = 2e-54
 Identities = 78/368 (21%), Positives = 146/368 (39%), Gaps = 59/368 (16%)

Query: 9   LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKS-STDLPKLPLPVIFGHEAVGVVESV 67
           L +E+  +  PK  E+ +++    +C SDV +++        +  P++ GHEA G V  V
Sbjct: 16  LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKV 75

Query: 68  GEYVEEVKERDLVL--PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNM------PRDGTS 119
           G+ V+ +K+ D V   P     C  C+ CK  K N C        P++      P DG  
Sbjct: 76  GKNVKHLKKGDRVAVEPGVP--CRRCQFCKEGKYNLC--------PDLTFCATPPDDGN- 124

Query: 120 RFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LSCGVSTGVGAAW 176
                                Y V       K+  ++ L    L   LS GV      A 
Sbjct: 125 ------------------LARYYVHAADFCHKLPDNVSLEEGALLEPLSVGV-----HAC 161

Query: 177 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG--ITDFIN 234
           + AGV++G+TV + G G +GL     A+   A  ++    +P + E+ K  G  +T  ++
Sbjct: 162 RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAF-VVCTARSPRRLEVAKNCGADVTLVVD 220

Query: 235 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPI 294
           PA   + ++ + I+       +   +C G    +    N +R G G  +++G  M    +
Sbjct: 221 PAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLMLVG--MGSQMV 277

Query: 295 SLNSIEI-LKGRSVCGTY-FGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAF 352
           ++  +    +   +   + +    P + +  +A    +    + + +TH         AF
Sbjct: 278 TVPLVNACAREIDIKSVFRYCNDYPIA-LEMVASGRCN----VKQLVTHSFKLEQTVDAF 332

Query: 353 DLLLEGKS 360
           +   +   
Sbjct: 333 EAARKKAD 340

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score =  181 bits (460), Expect = 5e-54
 Identities = 69/382 (18%), Positives = 125/382 (32%), Gaps = 50/382 (13%)

Query: 5   PGKPLVIEEIEV-EPPKAWEIRIKILCTSLCHSDVTFWK---SSTDLPKLPLPVIFGHEA 60
           P   + +++++  +     +I+I+ +   +C +D        + + LPK    ++ GHEA
Sbjct: 9   PNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGHEA 68

Query: 61  VGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSR 120
           +GVVE          + DLV+P+  R CG CR+C   + + C     G       DG   
Sbjct: 69  IGVVEES---YHGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGF-- 123

Query: 121 FRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI--------PLGI---ACLLSCGVS 169
                              E+   D  ++VKI   I        PL     +      V 
Sbjct: 124 -----------------MREWWYDDPKYLVKIPKSIEDIGILAQPLADIEKSIEEILEVQ 166

Query: 170 TGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI 229
             V       G      V + G G +G+      R       +     P + E       
Sbjct: 167 KRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEET 226

Query: 230 TDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT-SVMNDAFNSSREGWGKTVILGVE 288
                            +K+   G  D   +  G   +++ +         G   + G  
Sbjct: 227 KTNYYN----SSNGYDKLKDSV-GKFDVIIDATGADVNILGNVIPLLGRN-GVLGLFGFS 280

Query: 289 MHGS-PISLNSIE--ILKGRSVCGTYFGGLK--PRSDIATLAQKYLDKELNLGEFITHEV 343
             GS P+   +++  +   +++ G   G      ++ +  LA             IT  V
Sbjct: 281 TSGSVPLDYKTLQEIVHTNKTIIGLVNGQKPHFQQA-VVHLASWKTLYPKAAKMLITKTV 339

Query: 344 SFHDINKAFDLLLEGKSLRCII 365
           S +D  +   +L E +     I
Sbjct: 340 SINDEKELLKVLREKEHGEIKI 361

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score =  170 bits (433), Expect = 5e-50
 Identities = 82/336 (24%), Positives = 124/336 (36%), Gaps = 35/336 (10%)

Query: 26  IKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH 85
           ++ L  + C SD+               +I GHEAVG V  VG  V++ K  D V+    
Sbjct: 29  VRPLAVAPCTSDI--HTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKPGDRVVVPAI 86

Query: 86  RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVV- 144
                  + +            G++ +  +DG                    F E+  V 
Sbjct: 87  TPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGV-------------------FGEFFHVN 127

Query: 145 --DITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEG 202
             D+     +   IPL  A ++   ++TG   A ++A +++G TV + G+G VGL    G
Sbjct: 128 DADMNLA-HLPKEIPLEAAVMIPDMMTTGFHGA-ELANIKLGDTVCVIGIGPVGLMSVAG 185

Query: 203 ARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFEC 261
           A    A +I  V       +I  ++G TD IN        V Q I + TDG G D     
Sbjct: 186 ANHLGAGRIFAVGSRKHCCDIALEYGATDIINYK--NGDIVEQ-ILKATDGKGVDKVVIA 242

Query: 262 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKP--RS 319
            G       A    + G      +     G  I +   E   G        GGL P  R 
Sbjct: 243 GGDVHTFAQAVKMIKPG-SDIGNVNYLGEGDNIDIPRSEWGVGMGH-KHIHGGLCPGGRL 300

Query: 320 DIATLAQKYLDKELNLGEFITHEV-SFHDINKAFDL 354
            +  L      K ++  + +TH    F +I KAF L
Sbjct: 301 RMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFML 336

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score =  162 bits (412), Expect = 6e-47
 Identities = 57/362 (15%), Positives = 117/362 (32%), Gaps = 49/362 (13%)

Query: 9   LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWK-SSTDLPKLPLPVIFGHEAVGVVESV 67
            V+ E     P++ E  ++ L   +C +D           P+    ++ GHEAVGVV   
Sbjct: 13  PVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGHEAVGVVVDP 72

Query: 68  GEYVEEVKERDLVLPIFHR--DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELK 125
                E++E D+V+P   R    G     +  + +         R  +   G        
Sbjct: 73  N--DTELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGY------- 123

Query: 126 GDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL---LSCGV-STGVGAAWKVAGV 181
                        +E+      ++V+I P     +  L   +S    +     A + A  
Sbjct: 124 ------------MSEFFTSPEKYLVRI-PRSQAELGFLIEPISITEKALEHAYASRSAFD 170

Query: 182 EVGSTVAIFGLGAVGLAVAEGARLN--RASKIIGV---DINPEKFEIGKKFGITDFINPA 236
              S+  + G G++GL      +++      +  +   D      +I ++   T   +  
Sbjct: 171 WDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYVDS-- 228

Query: 237 TCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGV---EMHGSP 293
               +T  + + ++     D+ +E  G       +  +     G   +LGV         
Sbjct: 229 ---RQTPVEDVPDVY-EQMDFIYEATGFPKHAIQSVQALAPN-GVGALLGVPSDWAFEVD 283

Query: 294 ISLNSIEI-LKGRSVCGTYFGGLKPRSDIATLAQKYL-DKELNLGEFITHEVSFHDINKA 351
                 E+ L  +++ G+                 +    +  L + +T      +   A
Sbjct: 284 AGAFHREMVLHNKALVGSVNSH---VEHFEAATVTFTKLPKWFLEDLVTGVHPLSEFEAA 340

Query: 352 FD 353
           FD
Sbjct: 341 FD 342

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score =  160 bits (406), Expect = 3e-46
 Identities = 96/367 (26%), Positives = 140/367 (38%), Gaps = 60/367 (16%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLP-LPVIFGHEAVGV 63
            G PL I+E+ V  P   ++++KI  + +CH+D+       D P  P LP I GHE VG 
Sbjct: 11  FGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADG--DWPVKPTLPFIPGHEGVGY 68

Query: 64  VESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSK-FGRGYRPNMPRDGTSRF 121
           V +VG  V  VKE D V +P  +  CG C  C       C K    GY      +G    
Sbjct: 69  VSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGY----SVNGG--- 121

Query: 122 RELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC-GVSTGVGAAWKVAG 180
                           + EY V D  +V  +   +       + C GV+       KV  
Sbjct: 122 ----------------YGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTV--YKGLKVTD 163

Query: 181 VEVGSTVAIFGLG-----AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 235
              G  V I G+G     AV  A A G R      +  VDI+  K  + ++ G    +N 
Sbjct: 164 TRPGQWVVISGIGGLGHVAVQYARAMGLR------VAAVDIDDAKLNLARRLGAEVAVNA 217

Query: 236 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS 295
               D   +  +++   GGA             + A    R G G   + G  +      
Sbjct: 218 R---DTDPAAWLQKEI-GGAHGVLVTAVSPKAFSQAIGMVRRG-GTIALNG--LPPGDFG 270

Query: 296 LNSIE-ILKGRSVCGTYFGGLKPRSDIATLAQKYLD--KELNLGEFITHEVSFHDINKAF 352
               + +LKG ++ G+  G    RSD     Q+ LD     ++   +       D+N  F
Sbjct: 271 TPIFDVVLKGITIRGSIVGT---RSD----LQESLDFAAHGDVKATV-STAKLDDVNDVF 322

Query: 353 DLLLEGK 359
             L EGK
Sbjct: 323 GRLREGK 329

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score =  158 bits (402), Expect = 1e-45
 Identities = 106/366 (28%), Positives = 153/366 (41%), Gaps = 58/366 (15%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLP-LPVIFGHEAVGV 63
             +PL I+E+E       E+ ++I    +CH+D+       D P  P LP+I GHE VG+
Sbjct: 9   FKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHG--DWPVKPKLPLIPGHEGVGI 66

Query: 64  VESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSK-FGRGYRPNMPRDGTSRF 121
           VE VG  V  +K  D V +P  +  CG C  C S +   C      GY      DG    
Sbjct: 67  VEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGY----SVDGG--- 119

Query: 122 RELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC-GVSTGVGAAWKVAG 180
                           + EY      +VVKI  ++    A  + C GV+T    A KV G
Sbjct: 120 ----------------YAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTT--YKALKVTG 161

Query: 181 VEVGSTVAIFGLG-----AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 235
            + G  VAI+G+G     AV  A A G        ++ VDI  EK E+ K+ G    +NP
Sbjct: 162 AKPGEWVAIYGIGGLGHVAVQYAKAMGLN------VVAVDIGDEKLELAKELGADLVVNP 215

Query: 236 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS 295
                +  ++ +KE   GG                A+NS R G G  V++G+     PI 
Sbjct: 216 L---KEDAAKFMKEKV-GGVHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLPPEEMPIP 270

Query: 296 LNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLD--KELNLGEFITHEVSFHDINKAFD 353
           +    +L G  + G+  G    R D     Q+ L    E  +   I        IN+ FD
Sbjct: 271 IFDT-VLNGIKIIGSIVGT---RKD----LQEALQFAAEGKVKTII-EVQPLEKINEVFD 321

Query: 354 LLLEGK 359
            +L+G+
Sbjct: 322 RMLKGQ 327

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score =  156 bits (397), Expect = 8e-45
 Identities = 87/368 (23%), Positives = 143/368 (38%), Gaps = 58/368 (15%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLP-KLPLPVIFGHEAVGV 63
               L  ++I V  PKA E+ I +  + +CH+D+  W    D P  + LP++ GHE  GV
Sbjct: 14  SHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHG--DWPLPVKLPLVGGHEGAGV 71

Query: 64  VESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSK-FGRGYRPNMPRDGTSRF 121
           V  +GE V+  K  D   +   +  C  C  C+    + C      GY      DG+   
Sbjct: 72  VVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGY----THDGS--- 124

Query: 122 RELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC-GVSTGVGAAWKVAG 180
                           F +Y+  D      I     L     + C G++     A K A 
Sbjct: 125 ----------------FQQYATADAVQAAHIPQGTDLAQVAPILCAGITV--YKALKSAN 166

Query: 181 VEVGSTVAIFGLG------AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 234
           +  G  VAI G        AV  A A G R      ++G+D    K E+ +  G   FI+
Sbjct: 167 LMAGHWVAISGAAGGLGSLAVQYAKAMGYR------VLGIDGGEGKEELFRSIGGEVFID 220

Query: 235 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPI 294
                D  +   + + TDGGA          + +  +    R   G TV++G+   G+  
Sbjct: 221 FTKEKD--IVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRAN-GTTVLVGM-PAGAKC 276

Query: 295 SLNSIE-ILKGRSVCGTYFGGLKPRSDIATLAQKYLD--KELNLGEFITHEVSFHDINKA 351
             +    ++K  S+ G+Y G    R+D     ++ LD      +   I   V    + + 
Sbjct: 277 CSDVFNQVVKSISIVGSYVGN---RAD----TREALDFFARGLVKSPI-KVVGLSTLPEI 328

Query: 352 FDLLLEGK 359
           ++ + +G+
Sbjct: 329 YEKMEKGQ 336

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398

 Score =  137 bits (347), Expect = 4e-37
 Identities = 84/368 (22%), Positives = 129/368 (35%), Gaps = 66/368 (17%)

Query: 26  IKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH 85
           +K++ T++C SD    +  T        ++ GHE  G V   G  VE ++  DLV   F+
Sbjct: 38  LKVVSTNICGSDQHMVRGRTTAQV---GLVLGHEITGEVIEKGRDVENLQIGDLVSVPFN 94

Query: 86  RDCGECRDCKSSKSNTC--SKFGR-----GYRPNMPRDGTSRFRELKGDVIHHFLNISSF 138
             CG CR CK   +  C      R     GY       G                     
Sbjct: 95  VACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGG-------------------Q 135

Query: 139 TEYSVV---DITHVV---KITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL 192
            EY +V   D   +    +      +     LS  + TG   A   AGV  GSTV + G 
Sbjct: 136 AEYVLVPYADFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGA-VTAGVGPGSTVYVAGA 194

Query: 193 GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD 252
           G VGLA A  ARL  A+ +I  D+NP +    K  G           D  + + I  +  
Sbjct: 195 GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSL---DTPLHEQIAALLG 251

Query: 253 G-GADYCFECIGL---------------TSVMNDAFNSSREGWGKTVILGVEMHGSPISL 296
               D   + +G                 +V+N     +R   GK  I G+ +   P ++
Sbjct: 252 EPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVA-GKIGIPGLYVTEDPGAV 310

Query: 297 NSIEILKGRSV-CGTYF-------GGLKP-RSDIATLAQKYLDKELNLGE-FITHEVSFH 346
           ++   +   S+  G  +        G  P       L Q  +   +N+ E      +S  
Sbjct: 311 DAAAKIGSLSIRFGLGWAKSHSFHTGQTPVMKYNRALMQAIMWDRINIAEVVGVQVISLD 370

Query: 347 DINKAFDL 354
           D  + +  
Sbjct: 371 DAPRGYGE 378

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398

 Score =  133 bits (337), Expect = 1e-35
 Identities = 80/361 (22%), Positives = 128/361 (35%), Gaps = 51/361 (14%)

Query: 26  IKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH 85
           +K++ T++C SD   ++    +PK     + GHE  G V   G  VE +   DLV   F+
Sbjct: 37  LKVVSTNICGSDQHIYRGRFIVPK---GHVLGHEITGEVVEKGSDVELMDIGDLVSVPFN 93

Query: 86  RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVV- 144
             CG CR+CK ++S+ C         N   D  + F                  EY +V 
Sbjct: 94  VACGRCRNCKEARSDVCENNL----VNPDADLGA-FGFDLKGWS------GGQAEYVLVP 142

Query: 145 --DITHVV---KITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAV 199
             D   +    K      +    L+S  + TG       AGV+ GS V I G G VG   
Sbjct: 143 YADYMLLKFGDKEQAMEKIKDLTLISDILPTGFHGC-VSAGVKPGSHVYIAGAGPVGRCA 201

Query: 200 AEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYC 258
           A GARL  A+ +I  D NPE+ ++    G    I+        +   I ++      D  
Sbjct: 202 AAGARLLGAACVIVGDQNPERLKLLSDAGFET-IDLRN--SAPLRDQIDQILGKPEVDCG 258

Query: 259 FECIGL--------------TSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKG 304
            + +G                  +N  F+  R G G   I G+ +   P  +N       
Sbjct: 259 VDAVGFEAHGLGDEANTETPNGALNSLFDVVRAG-GAIGIPGIYVGSDPDPVNKDAGSGR 317

Query: 305 RSV-CGTYF-------GGLKP-RSDIATLAQKYLDKELNLG--EFITHEVSFHDINKAFD 353
             +  G  +        G+ P  +    L +  L  ++           ++       + 
Sbjct: 318 LHLDFGKMWTKSIRIMTGMAPVTNYNRHLTEAILWDQMPYLSKVMNIEVITLDQAPDGYA 377

Query: 354 L 354
            
Sbjct: 378 K 378

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =  111 bits (281), Expect = 3e-28
 Identities = 80/380 (21%), Positives = 137/380 (36%), Gaps = 68/380 (17%)

Query: 1   MQRI----PGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPV 54
           M+ +     G P  L + ++ V  P   E+R+++   +L H DV   K     PKLPLP 
Sbjct: 1   MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVA-SPKLPLPH 59

Query: 55  IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP 114
           + G +  GVV++VG  VE     D V+      CG C  C + + N C ++         
Sbjct: 60  VLGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQ---ILGEH 116

Query: 115 RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGA 174
           R GT                   + EY V+   ++     ++    A  +     T    
Sbjct: 117 RHGT-------------------YAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLT---- 153

Query: 175 AW----KVAGVEVGSTVAIFGLG------AVGLAVAEGARLNRASKIIGVDINPEKFEIG 224
           AW       GV  G  V +   G      A+ +A   GAR      +I    + +K    
Sbjct: 154 AWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGAR------VIATAGSEDKLRRA 207

Query: 225 KKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTV 283
           K  G  + +N     D    + ++ +T G GAD   +  G          ++  G G+  
Sbjct: 208 KALGADETVNYTH-PD--WPKEVRRLTGGKGADKVVDHTG-ALYFEGVIKATANG-GRIA 262

Query: 284 ILGVEMHGSPISLNSIEIL-KGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEF---I 339
           I G    G   +L    +  +  S+ G+       +S +  + +      +  G+    +
Sbjct: 263 IAGA-SSGYEGTLPFAHVFYRQLSILGSTMA---SKSRLFPILRF-----VEEGKLKPVV 313

Query: 340 THEVSFHDINKAFDLLLEGK 359
              +      +   LL E +
Sbjct: 314 GQVLPLEAAAEGHRLLEERR 333

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score =  104 bits (261), Expect = 2e-25
 Identities = 72/361 (19%), Positives = 117/361 (32%), Gaps = 58/361 (16%)

Query: 9   LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG 68
           L + E  V      +I ++ L  SL + D    ++      L  P +   +  GVVE+VG
Sbjct: 41  LKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMG-LDLAFPFVPASDMSGVVEAVG 99

Query: 69  EYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDV 128
           + V   +  D V+  F     +     + ++      G          G           
Sbjct: 100 KSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLG------GAHPGV---------- 143

Query: 129 IHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAW----KVAGVEVG 184
                     +EY V+     V     +    A  L C   T    AW    +   +  G
Sbjct: 144 ---------LSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLT----AWFALVEKGHLRAG 190

Query: 185 STVAIFGLGAVG-----LAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG 239
             V + G G V      +A A GA       +I    + EK +     G    IN     
Sbjct: 191 DRVVVQGTGGVALFGLQIAKATGAE------VIVTSSSREKLDRAFALGADHGINRLE-E 243

Query: 240 DKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNS 298
           D    + +  +T   GAD+  E  G  + +  +  +     G+  ++GV + G  +S   
Sbjct: 244 D--WVERVYALTGDRGADHILEIAG-GAGLGQSLKAVAPD-GRISVIGV-LEGFEVSGPV 298

Query: 299 IEIL-KGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLE 357
             +L K   V G   G    R  +  L        L     I     F ++ +A   L  
Sbjct: 299 GPLLLKSPVVQGISVG---HRRALEDLVGAVDRLGLKP--VIDMRYKFTEVPEALAHLDR 353

Query: 358 G 358
           G
Sbjct: 354 G 354

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score =  102 bits (256), Expect = 3e-24
 Identities = 64/395 (16%), Positives = 121/395 (30%), Gaps = 76/395 (19%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDV---------------TFWKSSTDLPK 49
           P K + ++++ V      E  + ++ +S+ ++ V                + + S    +
Sbjct: 54  PRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDLAKR 113

Query: 50  LPLPV-IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRG 108
             LP  + G +  GVV   G  V   +  D V+        E  D  +       +   G
Sbjct: 114 HDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWG 173

Query: 109 YRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGV 168
           +  N    G                      E ++V    ++    H+    A       
Sbjct: 174 FETN---FGG-------------------LAEIALVKSNQLMPKPDHLSWEEAAAPGLVN 211

Query: 169 STGVGA--AWKVAGVEVGSTVAIFGLG------AVGLAVAEGARLNRASKIIGVDINPEK 220
           ST      +   AG++ G  V I+G        A   A+A GA        I V  +P+K
Sbjct: 212 STAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGAN------PICVVSSPQK 265

Query: 221 FEIGKKFGITDFIN--------------PATCGDKTVSQVIKEMTDG-GADYCFECIGLT 265
            EI +  G    I+                    K   + I+E+T G   D  FE  G  
Sbjct: 266 AEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPG-R 324

Query: 266 SVMNDAFNSSREGWGKTVILGV-EMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATL 324
                +   +R+G G          +        +  +  + + G++F       +    
Sbjct: 325 ETFGASVFVTRKG-GTITTCASTSGYMHEYDNRYL-WMSLKRIIGSHFA---NYREAWEA 379

Query: 325 AQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGK 359
            +      ++    ++   S  D  +A   +    
Sbjct: 380 NRLIAKGRIHP--TLSKVYSLEDTGQAAYDVHRNL 412

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score = 93.1 bits (232), Expect = 2e-21
 Identities = 63/377 (16%), Positives = 108/377 (28%), Gaps = 86/377 (22%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-------PKLPLPVIFG 57
           P K + ++ +E+   +  ++R+K+L   +  SD+                    LP + G
Sbjct: 38  PAKVVELKNLELAAVRGSDVRVKMLAAPINPSDI--------NMIQGNYGLLPELPAVGG 89

Query: 58  HEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDG 117
           +E V  V +VG  V  +K  D V+P                                  G
Sbjct: 90  NEGVAQVVAVGSNVTGLKPGDWVIPA-----------------------------NAGLG 120

Query: 118 TSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWK 177
           T                   +   +V     ++++   IPL  A  L     T       
Sbjct: 121 T-------------------WRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMD 161

Query: 178 VAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFE----IGKKFGITDF 232
              ++ G +V        VG AV + A      + I V  +    +      K  G    
Sbjct: 162 FEQLQPGDSVIQNASNSGVGQAVIQIAAALGL-RTINVVRDRPDIQKLSDRLKSLGAEHV 220

Query: 233 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG 291
           I           ++     D         C+G      +       G G  V  G  M  
Sbjct: 221 ITEEELRRP---EMKNFFKDMPQPRLALNCVG-GKSSTELLRQLARG-GTMVTYGG-MAK 274

Query: 292 SPISLN-SIEILKGRSVCGTYFGG----LKP---RSDIATLAQKYLDKELNLGEFITHEV 343
            P+  + S+ I K   + G +         P   +  I TL       +L        +V
Sbjct: 275 QPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTA--PACSQV 332

Query: 344 SFHDINKAFDLLLEGKS 360
              D   A +  ++   
Sbjct: 333 PLQDYQSALEASMKPFI 349

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score = 91.4 bits (227), Expect = 2e-20
 Identities = 49/395 (12%), Positives = 109/395 (27%), Gaps = 76/395 (19%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDV----------------TFWKSSTDLP 48
             K L + E+ +      E+ + ++ +S+ ++ V                   +      
Sbjct: 46  VRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWATR 105

Query: 49  KLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRG 108
                 + G +  GVV   G  V   K  D V+                     ++    
Sbjct: 106 HDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDE-QEPATHGDGMLGTEQRAW 164

Query: 109 YRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGV 168
                   G                      EY VV  + ++    H+    A +     
Sbjct: 165 GFE--TNFGG-------------------LAEYGVVRASQLLPKPAHLTWEEAAVSPLCA 203

Query: 169 STGVGA--AWKVAGVEVGSTVAIFGLG------AVGLAVAEGARLNRASKIIGVDINPEK 220
            T      + + A ++ G  V I+G        A+      G         + V  + +K
Sbjct: 204 GTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGI------PVAVVSSAQK 257

Query: 221 FEIGKKFGITDFIN---------------PATCGDKTVSQVIKEMTDGGADYCFECIGLT 265
               +  G    IN                     + +++++ E      D  FE  G  
Sbjct: 258 EAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTG-R 316

Query: 266 SVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFGGLKPRSDIATL 324
                +   +R G G  V  G    G   + ++  + +K + + G++        +    
Sbjct: 317 VTFGLSVIVARRG-GTVVTCGS-SSGYLHTFDNRYLWMKLKKIVGSHGA---NHEEQQAT 371

Query: 325 AQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGK 359
            + +    +     ++      +  +A  ++   +
Sbjct: 372 NRLFESGAVVP--AMSAVYPLAEAAEACRVVQTSR 404

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score = 83.4 bits (207), Expect = 5e-18
 Identities = 79/370 (21%), Positives = 131/370 (35%), Gaps = 63/370 (17%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
             +     +         ++ I IL   +CHSD+    S  +  +   P+I GHE  G++
Sbjct: 13  KDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYS--EWKEGIYPMIPGHEIAGII 70

Query: 65  ESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRE 123
           + VG+ V++ K  D+V +  F   C  C+ CK  +   C+K    Y              
Sbjct: 71  KEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTY--------DCLDSF 122

Query: 124 LKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC-GVST-------GVGAA 175
              +          ++   VVD  +V+ +  + PL     L C G++T        V   
Sbjct: 123 HDNEPHM-----GGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTYSPLKFSKVTKG 177

Query: 176 WKVAGVEVGSTVAIFGLG--AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 233
            KV     G      GLG  AV  AVA GA      ++     N  K +     G+  F 
Sbjct: 178 TKVGVAGFG------GLGSMAVKYAVAMGA------EVSVFARNEHKKQDALSMGVKHFY 225

Query: 234 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP 293
                         K+      D+    I     + D         G   ++G+      
Sbjct: 226 TDP-----------KQCK-EELDFIISTIPTHYDLKDYLKLLTYN-GDLALVGLPPVEVA 272

Query: 294 ISLNSIEIL--KGRSVCGTYFGGLKPRSDIATLAQKYLD--KELNLGEFITHEVSFHDIN 349
             L+  + +    R V G+  GG+K   +     Q+ +D   + N+   I   +   DI+
Sbjct: 273 PVLSVFDFIHLGNRKVYGSLIGGIK---ET----QEMVDFSIKHNIYPEID-LILGKDID 324

Query: 350 KAFDLLLEGK 359
            A+  L  GK
Sbjct: 325 TAYHNLTHGK 334

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score = 83.0 bits (206), Expect = 6e-18
 Identities = 83/375 (22%), Positives = 139/375 (37%), Gaps = 71/375 (18%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
               L             ++R K+L   +CHSD+   K+  D      P++ GHE VG V
Sbjct: 25  QSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKN--DWGFSMYPLVPGHEIVGEV 82

Query: 65  ESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP-RDGTSRFR 122
             VG  V++V   D V +      C  C  C +   N C K    Y       DGT  + 
Sbjct: 83  TEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTY--ASIYHDGTITY- 139

Query: 123 ELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC-GVST-------GVGA 174
              G           ++ + V +  ++++   ++PL     L C G++        G+  
Sbjct: 140 ---G----------GYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLKYFGLDE 186

Query: 175 AWKVAGVEVGSTVAIFGLG-----AVGLAVAEGARLNRASKIIGVDINPEKF-EIGKKFG 228
                    G  + I GLG     AV  A A G+      K+  +  +P K  E  K FG
Sbjct: 187 P--------GKHIGIVGLGGLGHVAVKFAKAFGS------KVTVISTSPSKKEEALKNFG 232

Query: 229 ITDFINPATCGDKTVSQVIKEMTD--GGADYCFECIGLTSVMNDAFNSSREGWGKTVILG 286
              F+         VS+  ++M    G  D   + +     +   F   +   GK +++G
Sbjct: 233 ADSFL---------VSRDQEQMQAAAGTLDGIIDTVSAVHPLLPLFGLLKSH-GKLILVG 282

Query: 287 VEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLD--KELNLGEFITHEVS 344
                  +   S+ I   + V G+  GG+K   +     Q+ +D   + N+   I   +S
Sbjct: 283 APEKPLELPAFSL-IAGRKIVAGSGIGGMK---ET----QEMIDFAAKHNITADIE-VIS 333

Query: 345 FHDINKAFDLLLEGK 359
              +N A + L +  
Sbjct: 334 TDYLNTAMERLAKND 348

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score = 82.1 bits (203), Expect = 1e-17
 Identities = 53/387 (13%), Positives = 107/387 (27%), Gaps = 88/387 (22%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
             +  V            ++ +++   ++  SD                   G +  G V
Sbjct: 20  HDEVTVWNAAPCPMLPRDQVYVRVEAVAINPSD---TSMRGQFA--TPWAFLGTDYAGTV 74

Query: 65  ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFREL 124
            +VG  V  ++  D V        G                     P  P  G       
Sbjct: 75  VAVGSDVTHIQVGDRV-------YG---------------AQNEMCPRTPDQGA------ 106

Query: 125 KGDVIHHFLNISSFTEYSVVDITHVVKITPH--------IPLGIA----CLLSCGVSTGV 172
                        F++Y+V       KI           +P GI+     +   G+    
Sbjct: 107 -------------FSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLLGLPLPS 153

Query: 173 GAAWKVAGVEVGSTVAIFG-LGAVG-----LAVAEGARLNRASKIIGVDINPEKFEIGKK 226
            +A +         V ++G   A       +    G         I    +P  F++ K 
Sbjct: 154 PSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYI------PIAT-CSPHNFDLAKS 206

Query: 227 FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNS-SREGWGKTVIL 285
            G  +  +        ++Q I+  T     Y  +CI         F +  R G     + 
Sbjct: 207 RGAEEVFDYR---APNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLN 263

Query: 286 GVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKE--------LNLGE 337
               H +   + + +   G ++ G       P     +  ++   ++        +  G 
Sbjct: 264 PFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGEDLWRIAGQLVEDGR 323

Query: 338 FITHEV-----SFHDINKAFDLLLEGK 359
            + H +      F  I +  +L+ +G+
Sbjct: 324 LVHHPLRVVQGGFDHIKQGMELVRKGE 350

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score = 81.9 bits (203), Expect = 2e-17
 Identities = 59/243 (24%), Positives = 94/243 (38%), Gaps = 42/243 (17%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
             +PL   +I    P   +++I+I    +CHSD+   +S  +      P + GHE VG V
Sbjct: 31  AKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRS--EWAGTVYPCVPGHEIVGRV 88

Query: 65  ESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP-RDGTSRFR 122
            +VG+ VE+    DLV +      C  C +C+    N C      Y  N P  D      
Sbjct: 89  VAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTY--NSPTPDEPGH-- 144

Query: 123 ELKGDVIHHFLNISSFTEYSVVDITHVVKITPH--IPLGIACLLSC-GVSTGVGAAW--- 176
              G           +++  VV   +V++I  H    L     L C G++T     +   
Sbjct: 145 -TLG----------GYSQQIVVHERYVLRI-RHPQEQLAAVAPLLCAGITT-----YSPL 187

Query: 177 KVAGVEVGSTVAIFGLG-----AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD 231
           +      G  V + G+G      + LA A GA       ++    +  K E  K  G  +
Sbjct: 188 RHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGA------HVVAFTTSEAKREAAKALGADE 241

Query: 232 FIN 234
            +N
Sbjct: 242 VVN 244

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score = 81.3 bits (201), Expect = 3e-17
 Identities = 63/394 (15%), Positives = 110/394 (27%), Gaps = 93/394 (23%)

Query: 5   PGKPLVIEEIEVEPP--KAWEIRIKILCTSLCHSDVTF--------WKSSTDLPKLPLPV 54
           P   L  +  E++       E+ +K L + +  SD+             +T         
Sbjct: 15  PKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAA 74

Query: 55  IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP 114
             G+E +  V  VG  V  ++  D V+P                                
Sbjct: 75  PCGNEGLFEVIKVGSNVSSLEAGDWVIPSH-----------------------------V 105

Query: 115 RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGA 174
             GT                   +  +++ +    +K+ P+     A     G++   GA
Sbjct: 106 NFGT-------------------WRTHALGNDDDFIKL-PNPAQSKANGKPNGLTINQGA 145

Query: 175 AWKV------------AGVEVGSTVAIF--GLGAVGLAVAEGARLNRASKIIGV----DI 216
              V              +  G    I   G  AVG   ++  +L      I V      
Sbjct: 146 TISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDRPN 204

Query: 217 NPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD---GGADYCFECIGLTSVMNDAFN 273
             E     K+ G T  I       +     IKE      G A     C+G          
Sbjct: 205 LDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVG-GKSSTGIAR 263

Query: 274 SSREGWGKTVILGVEMHGSPISLN-SIEILKGRSVCGTYFGGL------KPRSDIATLAQ 326
                 G  +  G  M   P+++  S+ I K  +  G +   L         S +  +  
Sbjct: 264 KLNNN-GLMLTYGG-MSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIA 321

Query: 327 KYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS 360
            Y + +L      + E  +       +L  +G +
Sbjct: 322 WYEEGKLTD--AKSIETLYDGTKPLHELYQDGVA 353

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score = 79.9 bits (198), Expect = 7e-17
 Identities = 79/372 (21%), Positives = 137/372 (36%), Gaps = 65/372 (17%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
           P   L      +      ++ I+I+C  +CH+D+   K+  DL     P++ GHE VG V
Sbjct: 18  PSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKN--DLGMSNYPMVPGHEVVGEV 75

Query: 65  ESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP-RDGTSRFR 122
             VG  V +    D+V +      CG C  C+      C K    Y  N    +G     
Sbjct: 76  VEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSY--NDVYINGQPTQ- 132

Query: 123 ELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGA-----AWK 177
              G           F + +VV    VVKI   + +  A  L C    GV        + 
Sbjct: 133 ---G----------GFAKATVVHQKFVVKIPEGMAVEQAAPLLCA---GVTVYSPLSHFG 176

Query: 178 VAGVEVGSTVAIFGLG-----AVGLAVAEGARLNRASKIIGVDINPEKF-EIGKKFGITD 231
           +     G    I GLG      V +A A G        +  +  + +K  E  +  G  D
Sbjct: 177 LKQ--PGLRGGILGLGGVGHMGVKIAKAMGH------HVTVISSSNKKREEALQDLGADD 228

Query: 232 FINPATCGDKTVSQVIKEMTD--GGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM 289
           ++         +     +M++     DY  + + +   +    +  +   GK +++GV  
Sbjct: 229 YV---------IGSDQAKMSELADSLDYVIDTVPVHHALEPYLSLLKLD-GKLILMGVIN 278

Query: 290 HGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLD--KELNLGEFITHEVSFHD 347
           +        + +L  + + G++ G +K   +     ++ L+  KE  L   I   V    
Sbjct: 279 NPLQFLTPLL-MLGRKVITGSFIGSMK---ET----EEMLEFCKEKGLSSII-EVVKMDY 329

Query: 348 INKAFDLLLEGK 359
           +N AF+ L +  
Sbjct: 330 VNTAFERLEKND 341

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score = 76.8 bits (190), Expect = 8e-16
 Identities = 79/375 (21%), Positives = 135/375 (36%), Gaps = 67/375 (17%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
             K     + + +P    +I IKI    +C SD+           + +P++ GHE VG V
Sbjct: 17  DWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAG--HWGNMKMPLVVGHEIVGKV 74

Query: 65  ESVGEYVE-EVKERDLV-LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP-RDGTSRF 121
             +G      +K    V +      C EC  CK+     C+KF   Y  + P  DG    
Sbjct: 75  VKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTY--SQPYEDGYVSQ 132

Query: 122 RELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC-GVST-------GVG 173
               G           +  Y  V    VV I  +IP  +A  L C G++        G G
Sbjct: 133 ----G----------GYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPLVRNGCG 178

Query: 174 AAWKVAGVEVGSTVAIFGLG--AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD 231
              KV  V +G      G+G     ++ A GA      +   +  +  K E   K G   
Sbjct: 179 PGKKVGIVGLG------GIGSMGTLISKAMGA------ETYVISRSSRKREDAMKMGADH 226

Query: 232 FINPATCGDKTVSQVIKEMTDGGA---DYCFECI-GLTSVMNDAFNSSREGWGKTVILGV 287
           +I          +    +  +      D    C   LT +  +    + +  G+ V + +
Sbjct: 227 YI---------ATLEEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISI 277

Query: 288 EMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLD--KELNLGEFI-THEVS 344
                 +SL     LK  S+  +  G +K   ++     + L    E ++  ++ T  V 
Sbjct: 278 PEQHEMLSLKPY-GLKAVSISYSALGSIK---EL----NQLLKLVSEKDIKIWVETLPVG 329

Query: 345 FHDINKAFDLLLEGK 359
              +++AF+ + +G 
Sbjct: 330 EAGVHEAFERMEKGD 344

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score = 74.5 bits (184), Expect = 4e-15
 Identities = 66/369 (17%), Positives = 118/369 (31%), Gaps = 77/369 (20%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
           P   L +E   +EP K  E+ +++L   +  SD+    +     ++PLP I G+E VG+V
Sbjct: 16  PKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIP-ITGAYAHRIPLPNIPGYEGVGIV 74

Query: 65  ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFREL 124
           E+VG +V        VLP                                          
Sbjct: 75  ENVGAFVSRELIGKRVLP------------------------------------------ 92

Query: 125 KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVG 184
                       ++ EY       VV I   I    A  +     T      +   ++  
Sbjct: 93  -------LRGEGTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRN 145

Query: 185 STVAI------FGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATC 238
             + +       G     L+     RL      I V  N +  E   + G    I+ +T 
Sbjct: 146 DVLLVNACGSAIGHLFAQLSQILNFRL------IAVTRNNKHTEELLRLGAAYVIDTST- 198

Query: 239 GDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLN 297
               + + + E+T+G GAD   + IG     N+   S R   G  + +G+ + G  ++  
Sbjct: 199 AP--LYETVMELTNGIGADAAIDSIGGPDG-NELAFSLRPN-GHFLTIGL-LSGIQVNWA 253

Query: 298 SIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNL---GEF----ITHEVSFHDINK 350
            I + K +     +              Q+     + L    +     +       D+  
Sbjct: 254 EI-VTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIRLVENEQLRFMKVHSTYELADVKA 312

Query: 351 AFDLLLEGK 359
           A D++   +
Sbjct: 313 AVDVVQSAE 321

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score = 66.8 bits (164), Expect = 1e-12
 Identities = 70/377 (18%), Positives = 123/377 (32%), Gaps = 93/377 (24%)

Query: 5   PGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-------PKLPLPVI 55
              P  LV  ++E        + + +    +C  D         L        K+  P +
Sbjct: 30  LSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDY--------LMTKGEYQLKMEPPFV 81

Query: 56  FGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR 115
            G E  GVV S  E                                    G G +P    
Sbjct: 82  PGIETAGVVRSAPE------------------------------------GSGIKP---- 101

Query: 116 DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAA 175
                     GD +  F  I  + E   V  ++++   P +    A  L     T   A 
Sbjct: 102 ----------GDRVMAFNFIGGYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAY 151

Query: 176 WKVAGVEVGSTVAIF------GLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI 229
            +   +  G TV +       G  A+ +A   GA+      +I V       E  K  G 
Sbjct: 152 ARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAK------VIAVVNRTAATEFVKSVGA 205

Query: 230 TDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 288
              +      ++  ++ ++E T G G D   + IG     +DA  +     G+ +++G  
Sbjct: 206 DIVLP----LEEGWAKAVREATGGAGVDMVVDPIG-GPAFDDAVRTLASE-GRLLVVGF- 258

Query: 289 MHGS--PISLNSIEILKGRSVCGTYFGG-LKPRSDIATLAQKYLDKELNLG--EFITHEV 343
             G    I +N + +L+  S+ G  +G  L+  +D     Q  L+K +  G    ++  +
Sbjct: 259 AAGGIPTIKVNRL-LLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVAEGMRPPVSARI 317

Query: 344 SFHDINKAFDLLLEGKS 360
              +  +A     +GK 
Sbjct: 318 PLSEGRQALQDFADGKV 334

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score = 66.1 bits (162), Expect = 3e-12
 Identities = 46/324 (14%), Positives = 89/324 (27%), Gaps = 80/324 (24%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
               L    I V  P   ++ IK+   S+  SDV F K     P+       G E VG +
Sbjct: 33  MEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPR-VKGRPAGFEGVGTI 91

Query: 65  ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFREL 124
            + G+                                              +  ++    
Sbjct: 92  VAGGD----------------------------------------------EPYAKSL-- 103

Query: 125 KGDVIHHFLNIS---SFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAW---KV 178
            G  +     +S   S+ EY+V +    + +   +       +     T    A     +
Sbjct: 104 VGKRVAFATGLSNWGSWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLT----AIAMFDI 159

Query: 179 AGVEVGSTVAI------FGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 232
              E      +           +GLA  EG R       I      E+  + K  G    
Sbjct: 160 VKQEGEKAFVMTAGASQLCKLIIGLAKEEGFR------PIVTVRRDEQIALLKDIGAAHV 213

Query: 233 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG 291
           +N     D      ++E+          + +    + +  FN+  +   + +I G  +  
Sbjct: 214 LNEKA-PD--FEATLREVMKAEQPRIFLDAVT-GPLASAIFNAMPKR-ARWIIYGR-LDP 267

Query: 292 SPISLNSIE--ILKGRSVCGTYFG 313
               +      I + + + G +  
Sbjct: 268 DATVIREPGQLIFQHKHIEGFWLS 291

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score = 63.4 bits (155), Expect = 2e-11
 Identities = 52/280 (18%), Positives = 87/280 (31%), Gaps = 75/280 (26%)

Query: 1   MQRI----PGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWK-SSTDLPKLPLP 53
           +        G P   V EE++V  P   ++R++     +   D          L     P
Sbjct: 2   VMAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPP 61

Query: 54  VIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNM 113
           ++ G EA  VVE VG  V +                                        
Sbjct: 62  IVVGFEAAAVVEEVGPGVTDFTV------------------------------------- 84

Query: 114 PRDGTSRFRELKGD-VIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVS--T 170
                       G+ V      + ++++  +     ++K+   + L    L    +   T
Sbjct: 85  ------------GERVCTCLPPLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMT 132

Query: 171 GVGAAWKVAGVEVGSTVAI------FGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG 224
                 +   V+ G  V I       G   V  A   GA       +IG     EK E  
Sbjct: 133 AQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGAT------VIGTVSTEEKAETA 186

Query: 225 KKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIG 263
           +K G    IN      +  ++V++E+T G G D  ++ IG
Sbjct: 187 RKLGCHHTIN---YSTQDFAEVVREITGGKGVDVVYDSIG 223

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score = 63.0 bits (154), Expect = 2e-11
 Identities = 48/277 (17%), Positives = 81/277 (29%), Gaps = 74/277 (26%)

Query: 1   MQRI----PGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPV 54
             RI     G P  L   E     P   EI+++     +   D          P LP   
Sbjct: 2   ATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPS-- 59

Query: 55  IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP 114
             G EA G+V  VG  V+ +K                                       
Sbjct: 60  GLGTEAAGIVSKVGSGVKHIKA-------------------------------------- 81

Query: 115 RDGTSRFRELKGD-VIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA--CLLSCGVSTG 171
                      GD V++    + +++    +       +   I    A    L      G
Sbjct: 82  -----------GDRVVYAQSALGAYSSVHNIIADKAAILPAAISFEQAAASFLK-----G 125

Query: 172 VGA---AWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF 227
           +       K   ++           G VGL   + A+    +K+IG     +K +   K 
Sbjct: 126 LTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKA-LGAKLIGTVGTAQKAQSALKA 184

Query: 228 GITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIG 263
           G    IN     ++ + + +KE+T G      ++ +G
Sbjct: 185 GAWQVIN---YREEDLVERLKEITGGKKVRVVYDSVG 218

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score = 61.1 bits (149), Expect = 1e-10
 Identities = 56/283 (19%), Positives = 93/283 (32%), Gaps = 86/283 (30%)

Query: 1   MQRI----PGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-PKLPLP 53
            +RI     G P  L   + E E P    + ++     L   D  +    + L P   LP
Sbjct: 2   AKRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYY---RSGLYPAPFLP 58

Query: 54  VIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNM 113
              G E  GVVE+VG+ V   K                                      
Sbjct: 59  SGLGAEGAGVVEAVGDEVTRFKV------------------------------------- 81

Query: 114 PRDGTSRFRELKGD-VIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA--CLLSCGVST 170
                       GD V +    + +++E  V+   ++VK+   +    A   +L      
Sbjct: 82  ------------GDRVAYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLK----- 124

Query: 171 GVGA---AWKVAGVEVGSTVAI------FGLGAVGLAVAEGARLNRASKIIGVDINPEKF 221
           G+       +   V+ G  +         G  A   A A GA+      +IG   +PEK 
Sbjct: 125 GLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAK------LIGTVSSPEKA 178

Query: 222 EIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIG 263
              K  G  + I+      + V++ + E+TDG      ++ +G
Sbjct: 179 AHAKALGAWETID---YSHEDVAKRVLELTDGKKCPVVYDGVG 218

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score = 60.7 bits (148), Expect = 1e-10
 Identities = 56/402 (13%), Positives = 118/402 (29%), Gaps = 113/402 (28%)

Query: 1   MQRI----PGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL------- 47
           M+ +     G    L +    +  P+  E++I++    L   D+        +       
Sbjct: 4   MRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDL--------MVRQGNID 55

Query: 48  PKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGR 107
                P++ G E  G+VE++G+ V+  +  D V                           
Sbjct: 56  NPPKTPLVPGFECSGIVEALGDSVKGYEIGDRV-------MAFVN-------------YN 95

Query: 108 GYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG 167
            +                              E     +  V KI   +    A      
Sbjct: 96  AW-----------------------------AEVVCTPVEFVYKIPDDMSFSEAAAFPMN 126

Query: 168 VSTGVGAAW----KVAGVEVGSTVAIFG-LGAVGLAVAEGARLNRASKIIGVDINPEKFE 222
             T    A+    +VA +  G +V +    G VG AVA+         + G   +  K E
Sbjct: 127 FVT----AYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHE 181

Query: 223 IGKKFGITDFINPATCGDKTV--SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWG 280
             K       +      D+     Q +K ++  G D   +C+          +  +   G
Sbjct: 182 AIKDSV--THLF-----DRNADYVQEVKRISAEGVDIVLDCLC-GDNTGKGLSLLKPL-G 232

Query: 281 KTVILGV---------------EMHGSPISLNSIEIL-KGRSVCGTYFGGLKPRSDIATL 324
             ++ G                +       +N I++  + + + G     L  +   A L
Sbjct: 233 TYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGL 292

Query: 325 AQKYLDKELNL---GEF---ITHEVSFHDINKAFDLLLEGKS 360
            +  ++K + L    +    +    +  ++ +A   + +  +
Sbjct: 293 IRGVVEKLIGLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGN 334

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score = 59.9 bits (146), Expect = 3e-10
 Identities = 52/275 (18%), Positives = 94/275 (34%), Gaps = 69/275 (25%)

Query: 1   MQRI----PGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPV 54
            + I     G    +  E+  V      E+ IK   T + + +  F      +     P 
Sbjct: 9   QKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYF---RKGIYPCEKPY 65

Query: 55  IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP 114
           + G EA G V + G+ V   +  D V                            Y     
Sbjct: 66  VLGREASGTVVAKGKGVTNFEVGDQV---------------------------AY----- 93

Query: 115 RDGTSRFRELKGDVIHHFLNISSFTEYSVV-DITHVVKITPHIPLGIACLLSCGVSTGVG 173
                             ++ S+F +YS +     V+K+          L + G+   + 
Sbjct: 94  ------------------ISNSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQVLT 135

Query: 174 A---AWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI 229
           A     +   V+ G  V +F   G VGL + +  ++ + +  I V    EK +I K++G 
Sbjct: 136 ALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKM-KGAHTIAVASTDEKLKIAKEYGA 194

Query: 230 TDFINPATCGDKTVSQVIKEMTDG-GADYCFECIG 263
              IN      + + + + + T+G G D  F+ +G
Sbjct: 195 EYLIN---ASKEDILRQVLKFTNGKGVDASFDSVG 226

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score = 57.6 bits (140), Expect = 2e-09
 Identities = 36/243 (14%), Positives = 67/243 (27%), Gaps = 77/243 (31%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWK-SSTDLPKLPLPVIFGHEAVGV 63
               + +  +++    A +I ++     +   D   WK    +        + G +  GV
Sbjct: 13  KTHSVTLNSVDIPALAADDILVQNQAIGINPVD---WKFIKANPINWSNGHVPGVDGAGV 69

Query: 64  VESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRE 123
           +  VG  V+       V                            Y  ++ R G+     
Sbjct: 70  IVKVGAKVDSKMLGRRVA---------------------------YHTSLKRHGS----- 97

Query: 124 LKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI----ACLLSCGVSTGVGAAW--- 176
                         F E++V++   V+     +P  +    A  L C + T    AW   
Sbjct: 98  --------------FAEFTVLNTDRVM----TLPDNLSFERAAALPCPLLT----AWQAF 135

Query: 177 KVAGVEVGSTVAIFGLGAVG-----LAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD 231
           +   +     V I G GAV      +    G        +  V        +  K G+  
Sbjct: 136 EKIPLTKQREVLIVGFGAVNNLLTQMLNNAGYV------VDLVS-ASLSQALAAKRGVRH 188

Query: 232 FIN 234
              
Sbjct: 189 LYR 191

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score = 56.1 bits (135), Expect = 6e-09
 Identities = 53/412 (12%), Positives = 104/412 (25%), Gaps = 120/412 (29%)

Query: 5   PGKPLV--IEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLP----------- 51
               L   ++ I+   P   E+ I+I  + L  SD+     + D+               
Sbjct: 14  SSGELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVT 73

Query: 52  ----------------LPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCK 95
                             +  G+E  GVV   G                           
Sbjct: 74  ARVPEGAMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKT--------------- 118

Query: 96  SSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 155
                  +  G                               +++Y  +     + +   
Sbjct: 119 ------VAAIGGA----------------------------MYSQYRCIPADQCLVLPEG 144

Query: 156 IPLGI-ACLLSCGVSTGVGAAW---KVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASK 210
                 A      ++     A    +   +E  S +        +G  + +    +   K
Sbjct: 145 ATPADGASSFVNPLT-----ALGMVETMRLEGHSALVHTAAASNLGQMLNQICLKDGI-K 198

Query: 211 IIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIG------ 263
           ++ +    E+ ++ K  G     N        +  +  E     GA   F+  G      
Sbjct: 199 LVNIVRKQEQADLLKAQGAVHVCN--AASPTFMQDL-TEALVSTGATIAFDATGGGKLGG 255

Query: 264 -LTSVMNDAFNSSREGW-------GKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGL 315
            + + M  A N S   +        K V L   +  SP   N         + G     L
Sbjct: 256 QILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDTSPTEFNRN-FGMAWGMGGWL---L 311

Query: 316 KPRS-----DIATLAQKYLDKELNLGEF---ITHEVSFHDINKAFDLLLEGK 359
            P       + A   ++ +  EL    F    + E+S  ++     + +  K
Sbjct: 312 FPFLQKIGRERANALKQRVVAELK-TTFASHYSKEISLAEVLDLDMIAVYNK 362

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score = 55.0 bits (133), Expect = 1e-08
 Identities = 42/257 (16%), Positives = 82/257 (31%), Gaps = 59/257 (22%)

Query: 9   LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG 68
            +  +  V  P   ++ ++     +  SD+  + +    P +  P   G E +G V ++G
Sbjct: 41  TLSRDCPVPLPGDGDLLVRNRFVGVNASDI-NYSAGRYDPSVKPPFDIGFEGIGEVVALG 99

Query: 69  EYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDV 128
                                                            ++R+    G  
Sbjct: 100 LSA----------------------------------------------SARYTV--GQA 111

Query: 129 IHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG-VSTGVGAAWKVAGVEVGSTV 187
           +  ++   SF EY+VV  +    +    P  +  L+S       +    ++ G+  G  V
Sbjct: 112 V-AYMAPGSFAEYTVVPASIATPVPSVKPEYLTLLVSGTTAYISLK---ELGGLSEGKKV 167

Query: 188 AIFG-LGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246
            +    G  G    + ++  +   +IG   + EK    K  G    IN        V  V
Sbjct: 168 LVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKSLGCDRPIN-YKTEP--VGTV 223

Query: 247 IKEMTDGGADYCFECIG 263
           +K+    G D  +E +G
Sbjct: 224 LKQEYPEGVDVVYESVG 240

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score = 54.9 bits (133), Expect = 1e-08
 Identities = 66/376 (17%), Positives = 119/376 (31%), Gaps = 83/376 (22%)

Query: 1   MQRI----PGKP--LVIE-EIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLP 53
           M+ +     G P  L +  +I V  PK  ++ IK+    +   +    +S T   K  LP
Sbjct: 30  MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYI-RSGTYSRKPLLP 88

Query: 54  VIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNM 113
              G +  GV+E+VG+     K+ D V                      S    G     
Sbjct: 89  YTPGSDVAGVIEAVGDNASAFKKGDRVF--------------------TSSTISG----- 123

Query: 114 PRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVG 173
                                   + EY++     V K+   +       +     T   
Sbjct: 124 -----------------------GYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYR 160

Query: 174 AAWKVAGVEVGSTVAI------FGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF 227
           A    A V+ G +V +       GL A  +A A G +      I+G     E  +I  + 
Sbjct: 161 ALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLK------ILGTAGTEEGQKIVLQN 214

Query: 228 GITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILG 286
           G  +  N            IK+     G D   E +     ++   +    G G+ +++G
Sbjct: 215 GAHEVFNHRE---VNYIDKIKKYVGEKGIDIIIEMLA-NVNLSKDLSLLSHG-GRVIVVG 269

Query: 287 VEMHGSPISLNSIEIL-KGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEF---ITHE 342
                  I +N  + + K  S+ G        + +    A       + +G     I  +
Sbjct: 270 S---RGTIEINPRDTMAKESSIIGV-TLFSSTKEEFQQYAAALQAG-MEIGWLKPVIGSQ 324

Query: 343 VSFHDINKAFDLLLEG 358
                + +A + ++ G
Sbjct: 325 YPLEKVAEAHENIIHG 340

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score = 51.5 bits (124), Expect = 2e-07
 Identities = 48/270 (17%), Positives = 82/270 (30%), Gaps = 71/270 (26%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
              P V+ ++    P   ++ ++I  +     D           + PLP I G +  G V
Sbjct: 16  ANGPFVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDLAGTV 75

Query: 65  ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFREL 124
            +VG  V+  +  D V        G                       +          L
Sbjct: 76  VAVGPEVDSFRVGDAV-------FG-----------------------LTGG----VGGL 101

Query: 125 KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAW----KVAG 180
           +G          +  +++ VD   +       P  +    +  +      AW      A 
Sbjct: 102 QG----------THAQFAAVDARLLA----SKPAALTMRQASVLPLVFITAWEGLVDRAQ 147

Query: 181 VEVGSTVAIF----GLG--AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 234
           V+ G TV I     G+G  A+ +A+A GAR      +          E  +  G T    
Sbjct: 148 VQDGQTVLIQGGGGGVGHVAIQIALARGAR------VFATA-RGSDLEYVRDLGATPIDA 200

Query: 235 PATCGDKTVSQVIKEMTDG-GADYCFECIG 263
                 +       E T G G D  ++ +G
Sbjct: 201 -----SREPEDYAAEHTAGQGFDLVYDTLG 225

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score = 51.4 bits (124), Expect = 2e-07
 Identities = 38/214 (17%), Positives = 58/214 (27%), Gaps = 63/214 (29%)

Query: 5   PGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLP---KLPLPVIFGHE 59
            G P  L + +      +  ++ IK+   SL   D      S  +    K  LP   G++
Sbjct: 15  FGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYD 74

Query: 60  AVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTS 119
             G V  +G  V  V   D V                         G       P     
Sbjct: 75  FSGEVIELGSDVNNVNIGDKV------------------------MG---IAGFPDHP-- 105

Query: 120 RFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKV- 178
                             + EY       ++         ++ L +  + T    A +  
Sbjct: 106 ----------------CCYAEYVCASPDTII----QKLEKLSFLQAASLPTAGLTALQAL 145

Query: 179 --AGVEVGSTVAIFG-LGAVG-----LAVAEGAR 204
             A V+ G  V I    G VG     LA  +G  
Sbjct: 146 NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTT 179

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score = 44.6 bits (106), Expect = 3e-05
 Identities = 44/276 (15%), Positives = 79/276 (28%), Gaps = 68/276 (24%)

Query: 8   PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKS-STDLPKLPLPVIFGHEAVGVVES 66
            L+  E+    P   +I +++   S+   D   +K   +  P      + G++A G+V +
Sbjct: 39  SLLDIELPKPAPAGHDILVEVKAVSVNPVD---YKVRRSTPPDGTDWKVIGYDAAGIVSA 95

Query: 67  VGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKG 126
           VG  V   +  D V                            Y  ++ R G         
Sbjct: 96  VGPDVTLFRPGDEVF---------------------------YAGSIIRPG--------- 119

Query: 127 DVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAW---------K 177
                     +  E+ +VD     +I    P  +    +  +      AW          
Sbjct: 120 ----------TNAEFHLVD----ERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVN 165

Query: 178 VAGVEVGSTVAIF-GLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 236
                    + I  G G VG    + AR      +I     PE  E  K  G    I+ +
Sbjct: 166 KPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHS 225

Query: 237 TCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAF 272
               K ++  +  +  G   + F          +  
Sbjct: 226 ----KPLAAEVAALGLGAPAFVFSTTHTDKHAAEIA 257

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A* Length = 355

 Score = 43.7 bits (104), Expect = 5e-05
 Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 13/71 (18%)

Query: 167 GVSTGVGAAWKVAGVEV--GSTVAIFGLGAVGLAVA-----EGARLNRASKIIGVDINPE 219
           GV   + A     G+    G TV + GLGAVG ++A      GA      +++  D + E
Sbjct: 156 GVFEAMKATVAHRGLGSLDGLTVLVQGLGAVGGSLASLAAEAGA------QLLVADTDTE 209

Query: 220 KFEIGKKFGIT 230
           +       G T
Sbjct: 210 RVAHAVALGHT 220

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score = 43.3 bits (103), Expect = 7e-05
 Identities = 72/373 (19%), Positives = 119/373 (31%), Gaps = 83/373 (22%)

Query: 5   PGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVG 62
            G P  +VI +  +      E+ ++     +   D+   + S   PK     I G E  G
Sbjct: 37  FGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPK-DASPILGLELSG 95

Query: 63  VVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFR 122
            +  VG                                                G S + 
Sbjct: 96  EIVGVG-----------------------------------------------PGVSGYA 108

Query: 123 ELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVE 182
              GD +    N  ++ EY ++    ++          A  L     T     +++AG+ 
Sbjct: 109 V--GDKVCGLANGGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQMAGLT 166

Query: 183 VGSTVAI------FGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 236
            G +V I       G  A+ LA A GA       +     +  K E  ++ G    IN  
Sbjct: 167 EGESVLIHGGTSGIGTTAIQLARAFGAE------VYATAGSTGKCEACERLGAKRGIN-- 218

Query: 237 TCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGS-PIS 295
               +  + VIK  T  G D   + IG  +       S  +  G   I+   + G+    
Sbjct: 219 -YRSEDFAAVIKAETGQGVDIILDMIG-AAYFERNIASLAKD-GCLSIIAF-LGGAVAEK 274

Query: 296 LNSIEILKGR-SVCGTYFGGLKPRSDI--ATLAQKYLDKELNL---GEF---ITHEVSFH 346
           +N   I+  R +V G+    ++PR+      +    L +   L   G     I    +F 
Sbjct: 275 VNLSPIMVKRLTVTGST---MRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHKVFAFE 331

Query: 347 DINKAFDLLLEGK 359
           D+  A  LL EG 
Sbjct: 332 DVADAHRLLEEGS 344

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score = 41.1 bits (97), Expect = 4e-04
 Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 4/73 (5%)

Query: 8  PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESV 67
                +++  PK  EI +KI   S+   D    K          P + G +A+GVVESV
Sbjct: 19 LFKTFNLDIPEPKVHEILVKIQSISVNPVD---TKQRLMDVS-KAPRVLGFDAIGVVESV 74

Query: 68 GEYVEEVKERDLV 80
          G  V    + D+V
Sbjct: 75 GNEVTMFNQGDIV 87

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* Length = 144

 Score = 38.8 bits (91), Expect = 6e-04
 Identities = 18/79 (22%), Positives = 30/79 (37%), Gaps = 8/79 (10%)

Query: 186 TVAIFGLGAVGLAVAEGARLNRASK-IIGVDINPEKFEIGKKFGITDFINPATCGDKTVS 244
             A+ GLG  G ++ +   L+R    ++ VDIN EK           +   A   + T  
Sbjct: 8   QFAVIGLGRFGGSIVK--ELHRMGHEVLAVDINEEKVN-----AYASYATHAVIANATEE 60

Query: 245 QVIKEMTDGGADYCFECIG 263
             +  +     +Y    IG
Sbjct: 61  NELLSLGIRNFEYVIVAIG 79

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	371
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	100.0
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.89
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	99.17
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.93
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.78
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.62
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.52
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.51
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.38
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.37
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	98.13
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	98.1
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.01
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	97.99
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.95
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.91
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	97.89
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.82
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	97.8
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	97.75
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.72
2b25_A	336	Hypothetical protein; structural genomics, methyl	97.71
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.68
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.62
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.61
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	97.58
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.57
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.48
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.45
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	97.43
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.39
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	97.36
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	97.36
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	97.35
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.33
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	97.32
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	97.28
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	97.23
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	97.22
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	97.22
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	97.21
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	97.2
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	97.19
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.1
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	97.1
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	97.1
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.09
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	97.08
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	97.06
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	97.03
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	97.03
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	97.02
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	97.02
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	97.01
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	97.01
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	97.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	96.99
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	96.99
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	96.98
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	96.98
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	96.98
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	96.97
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	96.95
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.95
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	96.93
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	96.93
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	96.93
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	96.91
1spx_A	278	Short-chain reductase family member (5L265); paral	96.91
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	96.91
1xhl_A	297	Short-chain dehydrogenase/reductase family member	96.89
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	96.88
3imf_A	257	Short chain dehydrogenase; structural genomics, in	96.88
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	96.87
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	96.87
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	96.86
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	96.85
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.85
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	96.85
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	96.85
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	96.85
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	96.85
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	96.85
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	96.84
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	96.83
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.83
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	96.83
4dqx_A	277	Probable oxidoreductase protein; structural genomi	96.83
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	96.83
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	96.82
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	96.82
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	96.82
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	96.81
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	96.81
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	96.81
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	96.81
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	96.8
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	96.8
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	96.8
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	96.79
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	96.79
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	96.79
3rih_A	293	Short chain dehydrogenase or reductase; structural	96.78
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	96.78
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	96.78
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	96.78
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	96.78
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.78
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	96.78
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	96.77
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	96.77
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	96.76
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	96.76
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	96.76
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	96.74
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	96.74
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	96.74
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	96.74
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	96.74
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	96.74
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	96.73
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	96.73
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	96.72
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	96.72
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	96.72
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	96.72
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.71
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	96.71
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	96.71
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	96.71
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	96.71
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	96.7
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	96.7
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	96.69
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	96.69
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	96.69
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	96.68
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	96.67
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	96.67
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	96.67
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	96.67
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	96.66
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	96.66
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	96.65
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	96.65
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	96.64
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	96.64
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	96.64
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	96.64
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	96.63
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	96.63
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	96.62
3cxt_A	291	Dehydrogenase with different specificities; rossma	96.62
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	96.62
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	96.62
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	96.62
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	96.62
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	96.61
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	96.61
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.61
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	96.6
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	96.6
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	96.59
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	96.58
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	96.58
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	96.58
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	96.58
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	96.57
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	96.57
1nvm_B	312	Acetaldehyde dehydrogenase (acylating), 4-hydroxy-	96.56
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	96.56
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	96.56
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	96.55
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.55
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	96.55
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	96.53
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	96.53
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	96.52
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	96.52
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	96.52
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	96.51
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	96.51
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	96.5
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	96.5
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	96.5
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.5
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	96.48
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	96.48
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	96.48
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.47
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	96.47
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	96.47
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	96.47
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	96.46
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.46
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	96.46
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	96.46
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	96.46
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	96.45
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	96.45
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	96.45
1xkq_A	280	Short-chain reductase family member (5D234); parra	96.45
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	96.44
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	96.43
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	96.43
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	96.43
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	96.42
1xq1_A	266	Putative tropinone reducatse; structural genomics,	96.42
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	96.42
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	96.41
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	96.4
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	96.4
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	96.38
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	96.38
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	96.38
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	96.37
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	96.37
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	96.37
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	96.37
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	96.36
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	96.36
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	96.35
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	96.35
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	96.35
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	96.35
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	96.35
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	96.34
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	96.33
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	96.32
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	96.32
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	96.32
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	96.32
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	96.3
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.3
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	96.3
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	96.29
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.28
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	96.28
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	96.28
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	96.28
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.27
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	96.27
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	96.27
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	96.26
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.24
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	96.21
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	96.21
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.2
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.19
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	96.19
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	96.18
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	96.18
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	96.18
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	96.18
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	96.17
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.17
1id1_A	153	Putative potassium channel protein; RCK domain, E.	96.17
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	96.17
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	96.17
3e18_A	359	Oxidoreductase; dehydrogenase, NAD-binding, struct	96.16
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	96.16
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	96.14
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	96.14
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.13
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	96.13
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	96.12
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	96.12
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	96.11
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	96.11
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	96.1
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	96.09
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	96.07
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	96.07
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	96.07
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	96.07
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	96.06
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	96.06
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	96.05
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	96.05
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	96.03
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	96.03
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	96.03
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	96.02
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	96.02
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	96.02
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	96.01
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	96.01
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	96.01
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.01
1xq6_A	253	Unknown protein; structural genomics, protein stru	96.0
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	95.99
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	95.99
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	95.98
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	95.97
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	95.97
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	95.97
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	95.96
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	95.96
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	95.96
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	95.96
3c3y_A	237	Pfomt, O-methyltransferase; plant secondary metabo	95.96
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	95.95
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	95.95
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	95.94
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.93
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	95.93
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	95.91
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	95.91
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	95.91
4had_A	350	Probable oxidoreductase protein; structural genomi	95.9
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	95.9
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	95.88
3dli_A	240	Methyltransferase; PSI-II, NYSGXRC, structural gen	95.88
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	95.87
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	95.86
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	95.86
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	95.85
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	95.84
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	95.82
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	95.8
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	95.79
3q2i_A	354	Dehydrogenase; rossmann fold, UDP-sugar binding, N	95.79
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	95.79
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	95.77
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	95.77
4fb5_A	393	Probable oxidoreductase protein; PSI-biology, nysg	95.77
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	95.76
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	95.76
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	95.76
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	95.75
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	95.74
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	95.73
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	95.71
3bwc_A	304	Spermidine synthase; SAM, SGPP, structura genomics	95.7
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	95.69
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	95.66
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	95.65
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	95.65
1mjf_A	281	Spermidine synthase; spermidine synthetase, struct	95.64
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	95.62
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	95.62
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	95.61
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	95.6
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	95.59
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	95.59
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	95.58
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	95.58
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	95.56
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	95.55
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	95.55
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	95.52
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	95.51
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	95.5
1j4a_A	333	D-LDH, D-lactate dehydrogenase; NAD-dependent dehy	95.5
4hkt_A	331	Inositol 2-dehydrogenase; structural genomics, nys	95.49
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	95.48
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	95.48
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	95.48
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	95.46
1xj5_A	334	Spermidine synthase 1; structural genomics, protei	95.46
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	95.45
3ezy_A	344	Dehydrogenase; structural genomics, unknown functi	95.44
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	95.43
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	95.43
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	95.42
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	95.42
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	95.42
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	95.4
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	95.38
3uwp_A	438	Histone-lysine N-methyltransferase, H3 lysine-79;	95.37
3ajd_A	274	Putative methyltransferase MJ0026; tRNA, M5C, ross	95.37
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	95.36
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	95.34
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	95.33
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	95.33
3iv6_A	261	Putative Zn-dependent alcohol dehydrogenase; alpha	95.31
2o57_A	297	Putative sarcosine dimethylglycine methyltransfera	95.3
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	95.3
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	95.3
4gqa_A	412	NAD binding oxidoreductase; structural genomics, P	95.29
2b2c_A	314	Spermidine synthase; beta-alpha, transferase; 2.50	95.29
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	95.28
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	95.25
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	95.25
3db2_A	354	Putative NADPH-dependent oxidoreductase; two domai	95.23
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	95.23
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	95.23
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	95.23
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	95.21
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	95.21
3rc1_A	350	Sugar 3-ketoreductase; sugar biosynthesis, TDP bin	95.18
1zh8_A	340	Oxidoreductase; TM0312, structural genomics, JO ce	95.15
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	95.15
1vl5_A	260	Unknown conserved protein BH2331; putative methylt	95.14
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	95.14
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	95.12
2pxx_A	215	Uncharacterized protein MGC2408; structural genomi	95.09
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	95.08
3gjy_A	317	Spermidine synthase; APC62791, structural genomics	95.06
3euw_A	344	MYO-inositol dehydrogenase; protein structure init	95.05
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	95.03
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	95.03
3e9m_A	330	Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA,	95.0
3adn_A	294	Spermidine synthase; aminopropyltransferase, polya	95.0
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	94.99
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	94.96
3g07_A	292	7SK snRNA methylphosphate capping enzyme; structur	94.95
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	94.93
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	94.93
3ohs_X	334	Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; d	94.92
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	94.91
4gek_A	261	TRNA (CMO5U34)-methyltransferase; structural genom	94.91
3m33_A	226	Uncharacterized protein; structural genomics, PSI-	94.91
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	94.89
3e82_A	364	Putative oxidoreductase; NAD, GFO/IDH/MOCA family,	94.89
1iy9_A	275	Spermidine synthase; rossmann fold, structural gen	94.89
2d0i_A	333	Dehydrogenase; structural genomics, NPPSFA, nation	94.87
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	94.87
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	94.84
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	94.83
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	94.82
1ixk_A	315	Methyltransferase; open beta sheet; 1.90A {Pyrococ	94.82
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	94.82
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	94.81
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	94.79
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	94.78
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	94.78
3f4k_A	257	Putative methyltransferase; structural genomics, P	94.77
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	94.76
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	94.76
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	94.75

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=1.2e-60  Score=453.48  Aligned_cols=362  Identities=49%  Similarity=0.870  Sum_probs=315.7

Q ss_pred             ccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEee
Q 017457            3 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP   82 (371)
Q Consensus         3 ~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~   82 (371)
                      ..++++++++++|.|+|+++||||||++++||++|++++.|..+..  .+|.++|||++|+|+++|++|++|++||+|++
T Consensus        15 ~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~P~v~GhE~~G~V~~vG~~v~~~~vGdrV~~   92 (378)
T 3uko_A           15 YEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEG--LFPCILGHEAAGIVESVGEGVTEVQAGDHVIP   92 (378)
T ss_dssp             CSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTCCTTC--CSSBCCCCEEEEEEEEECTTCCSCCTTCEEEE
T ss_pred             ecCCCccEEEEecCCCCCCCeEEEEEEEeecCHHHHHHhcCCCCCC--CCCccCCccceEEEEEeCCCCCcCCCCCEEEE
Confidence            4556669999999999999999999999999999999999986655  78999999999999999999999999999999


Q ss_pred             ccCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchh
Q 017457           83 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP-RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA  161 (371)
Q Consensus        83 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~a  161 (371)
                      .+...|+.|++|+.+++++|.........|+. .+|..++. .+|...+++++.|+|+||++++++.++++|+++++++|
T Consensus        93 ~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~-~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~a  171 (378)
T 3uko_A           93 CYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFS-VNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKV  171 (378)
T ss_dssp             CSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEE-ETTEEEBCCTTTCCSBSEEEEEGGGEEECCTTSCHHHH
T ss_pred             ecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccc-cCCcccccccCCcceEeEEEechhheEECCCCCCHHHh
Confidence            99999999999999999999976431112322 22222221 13444555666789999999999999999999999999


Q ss_pred             hccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCc
Q 017457          162 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK  241 (371)
Q Consensus       162 a~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~  241 (371)
                      |.+++++.|||+++.+..++++|++|||+|+|++|++++|+|+++|+++|++++++++|+++++++|+++++|+.+ .+.
T Consensus       172 a~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~-~~~  250 (378)
T 3uko_A          172 CLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKD-HDK  250 (378)
T ss_dssp             GGGGTHHHHHHHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGG-CSS
T ss_pred             hhhhhhHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEcccc-Cch
Confidence            9999999999998888899999999999999999999999999999978999999999999999999999999862 126


Q ss_pred             cHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhc-CCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCchhh
Q 017457          242 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSRE-GWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSD  320 (371)
Q Consensus       242 ~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~-~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  320 (371)
                      ++.+.+++++++++|+|||++|++..++.+++++++ + |+++.+|.........++...++.++++.|+.+..+...++
T Consensus       251 ~~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~-G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~  329 (378)
T 3uko_A          251 PIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGW-GTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRTQ  329 (378)
T ss_dssp             CHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTT-CEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCCHHHH
T ss_pred             hHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccC-CEEEEEcccCCCCccccCHHHHhcCcEEEEEEecCCCchHH
Confidence            899999999988999999999997779999999999 5 99999997555556777777776789999987776666778


Q ss_pred             HHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEEeCc
Q 017457          321 IATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWMDK  369 (371)
Q Consensus       321 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~~~~  369 (371)
                      +.++++++++|++.+.++++++|+|+++++||+.+.+++..|++|++++
T Consensus       330 ~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~g~~~Kvvi~~~~  378 (378)
T 3uko_A          330 VPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCLRCVLDTSK  378 (378)
T ss_dssp             HHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHTTCTTCSEEEEETTC
T ss_pred             HHHHHHHHHcCCCChhHheeeEeeHHHHHHHHHHHHCCCceEEEEecCC
Confidence            9999999999999988899999999999999999998887799999875

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=5.8e-57  Score=427.50  Aligned_cols=357  Identities=43%  Similarity=0.732  Sum_probs=298.0

Q ss_pred             ccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEee
Q 017457            3 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP   82 (371)
Q Consensus         3 ~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~   82 (371)
                      ..++.+++++++|.|+|+++||||||++++||++|++++.|.++ .  .+|.++|||++|+|+++|++|++|++||+|++
T Consensus        16 ~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~--~~P~v~GhE~~G~V~~vG~~v~~~~vGdrV~~   92 (373)
T 1p0f_A           16 WEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP-S--KFPVILGHEAVGVVESIGAGVTCVKPGDKVIP   92 (373)
T ss_dssp             SSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-C--CSSBCCCCCEEEEEEEECTTCCSCCTTCEEEE
T ss_pred             EcCCCCeeEEEeeCCCCCCCeEEEEEeEEeecchhHHHhcCCCC-C--CCCcccCcCceEEEEEECCCCCccCCCCEEEE
Confidence            34555699999999999999999999999999999999998765 3  68999999999999999999999999999999


Q ss_pred             ccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhh
Q 017457           83 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC  162 (371)
Q Consensus        83 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa  162 (371)
                      .+...||+|++|+++.+++|.........|+..+|..++. ..|...+++...|+|+||++++++.++++|++++++ ||
T Consensus        93 ~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~-~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~-aa  170 (373)
T 1p0f_A           93 LFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFT-CRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLE-SC  170 (373)
T ss_dssp             CSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEE-ETTEEEBCSTTTCCSBSEEEEETTSEEEECTTCCGG-GG
T ss_pred             CCCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccc-cCCcccccccCCccceeEEEEchhhEEECCCCCChh-hh
Confidence            9999999999999999999987653111133222211100 011122233344799999999999999999999999 99


Q ss_pred             ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457          163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT  242 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~  242 (371)
                      ++++++.|||+++.+.+++++|++|||+|+|++|++++|+||++|+++|++++++++++++++++|+++++|+++ .+++
T Consensus       171 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~-~~~~  249 (373)
T 1p0f_A          171 LIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKD-YDKP  249 (373)
T ss_dssp             GGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGG-CSSC
T ss_pred             hhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEeccc-ccch
Confidence            999999999998878889999999999999999999999999999978999999999999999999999998763 0146


Q ss_pred             HHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCC-ceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCchhhH
Q 017457          243 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGW-GKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDI  321 (371)
Q Consensus       243 ~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  321 (371)
                      +.+.+++++++++|+|||++|+...++.+++++++ + |+++.+|.........++...++.+.++.|+.+..+. .+++
T Consensus       250 ~~~~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~-~~~~  327 (373)
T 1p0f_A          250 IYEVICEKTNGGVDYAVECAGRIETMMNALQSTYC-GSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFK-GEEV  327 (373)
T ss_dssp             HHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCT-TTCEEEECCCCCTTCCEEECTHHHHTTCEEEECSGGGCC-GGGH
T ss_pred             HHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHhc-CCCEEEEEccCCCCCccccCHHHhccCceEEeeccCCcC-HHHH
Confidence            88889998877999999999987668999999999 5 9999999754333456766666553399988654433 3679


Q ss_pred             HHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEEe
Q 017457          322 ATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM  367 (371)
Q Consensus       322 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~~  367 (371)
                      +++++++++|++.+.++++++|+|+++++|++.+.+++..|+++.+
T Consensus       328 ~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvi~~  373 (373)
T 1p0f_A          328 SRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQGVRSIMIY  373 (373)
T ss_dssp             HHHHHHHHTTSSCGGGGEEEEECGGGHHHHHHHTTTSSCSEEEEEC
T ss_pred             HHHHHHHHcCCCCchheEEEEeeHHHHHHHHHHHHCCCcceEEEeC
Confidence            9999999999998878889999999999999999887767999874

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=9.2e-57  Score=426.28  Aligned_cols=358  Identities=44%  Similarity=0.748  Sum_probs=299.7

Q ss_pred             ccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEee
Q 017457            3 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP   82 (371)
Q Consensus         3 ~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~   82 (371)
                      ..++.+++++++|.|+|+++||||||++++||++|++++.|.++.   .+|.++|||++|+|+++|++|++|++||+|++
T Consensus        15 ~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~P~v~GhE~~G~V~~vG~~v~~~~vGdrV~~   91 (374)
T 2jhf_A           15 WEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT---PLPVIAGHEAAGIVESIGEGVTTVRPGDKVIP   91 (374)
T ss_dssp             CSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCC---CSSBCCCCSEEEEEEEECTTCCSCCTTCEEEE
T ss_pred             ecCCCceEEEEccCCCCCCCeEEEEEeEEeechhhHHHHcCCCCC---CCCcccCcCceEEEEEECCCCCCCCCCCEEEE
Confidence            345556999999999999999999999999999999999987542   37899999999999999999999999999999


Q ss_pred             ccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhh
Q 017457           83 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC  162 (371)
Q Consensus        83 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa  162 (371)
                      .+...|++|++|+.+.+++|.........|+..+|..++. ..|...++++..|+|+||++++++.++++|+++++++||
T Consensus        92 ~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~-~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa  170 (374)
T 2jhf_A           92 LFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVC  170 (374)
T ss_dssp             CSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEE-ETTEEEBCSTTTCCSBSEEEEEGGGEEECCTTCCHHHHG
T ss_pred             CCCCCCCCCccccCCCcCcCCCCccccccccccCCccccc-ccccccccccCCccCeeEEEEchHHeEECCCCCCHHHhh
Confidence            9999999999999999999987653111233322211110 011122333345799999999999999999999999999


Q ss_pred             ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457          163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT  242 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~  242 (371)
                      ++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+++|+++|+++++++++++.++++|+++++|+.+ ..++
T Consensus       171 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~-~~~~  249 (374)
T 2jhf_A          171 LIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQD-YKKP  249 (374)
T ss_dssp             GGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGG-CSSC
T ss_pred             hhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccc-cchh
Confidence            999999999998878889999999999999999999999999999978999999999999999999999998753 0146


Q ss_pred             HHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCC-ceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhh
Q 017457          243 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGW-GKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSD  320 (371)
Q Consensus       243 ~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~  320 (371)
                      +.+.+++++++++|+|||++|....++.+++++++ + |+++.+|.........++...++. + ++.|+.+..+...++
T Consensus       250 ~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~~~~~~~~~  327 (374)
T 2jhf_A          250 IQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQE-AYGVSVIVGVPPDSQNLSMNPMLLLSGR-TWKGAIFGGFKSKDS  327 (374)
T ss_dssp             HHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCT-TTCEEEECSCCCTTCCEEECTHHHHTTC-EEEECSGGGCCHHHH
T ss_pred             HHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhc-CCcEEEEeccCCCCCccccCHHHHhcCC-eEEEeccCCCChHHH
Confidence            88888888877999999999987668999999999 5 999999975433345666666655 6 999886554444578


Q ss_pred             HHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEEe
Q 017457          321 IATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM  367 (371)
Q Consensus       321 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~~  367 (371)
                      ++++++++++|++.+.++++++|+|+++++|++.+.+++..|+++.+
T Consensus       328 ~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~Kvvi~~  374 (374)
T 2jhf_A          328 VPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTILTF  374 (374)
T ss_dssp             HHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             HHHHHHHHHcCCCCchhheEEEEeHHHHHHHHHHHHCCCcceEEEeC
Confidence            99999999999998888889999999999999999888777999874

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=8e-57  Score=426.68  Aligned_cols=357  Identities=44%  Similarity=0.781  Sum_probs=299.6

Q ss_pred             cCCCCcEEEEEecCCCCCCeEEEEEeEeeccccccc-ccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEee
Q 017457            4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVT-FWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP   82 (371)
Q Consensus         4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~-~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~   82 (371)
                      .++.+++++++|.|+|+++||||||.+++||++|++ ++.|.++ .  .+|.++|||++|+|+++|++|++|++||+|++
T Consensus        16 ~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~-~--~~P~v~GhE~~G~V~~vG~~V~~~~vGdrV~~   92 (374)
T 1cdo_A           16 EANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK-D--GFPVVLGHEGAGIVESVGPGVTEFQPGEKVIP   92 (374)
T ss_dssp             STTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCT-T--SCSEECCCCEEEEEEEECTTCCSCCTTCEEEE
T ss_pred             cCCCCeEEEEeeCCCCCCCEEEEEEeEEeechhhHHHHhCCCCC-C--CCCcccCccceEEEEEECCCCccCCCCCEEEe
Confidence            445569999999999999999999999999999999 8888765 3  68999999999999999999999999999999


Q ss_pred             ccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhh
Q 017457           83 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC  162 (371)
Q Consensus        83 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa  162 (371)
                      .+...||+|++|+.+++++|.........|+..+|..++. ..|...+++...|+|+||+++++++++++|+++++++||
T Consensus        93 ~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~-~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa  171 (374)
T 1cdo_A           93 LFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFT-CKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVC  171 (374)
T ss_dssp             CSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEE-ETTEEEEEGGGTCCSBSEEEEEGGGEEECCTTCCHHHHG
T ss_pred             CCCCCCCCChhhcCCCcCcCCCcccccccccccCCccccc-cCCcccccccCCccceeEEEEchhheEECCCCCCHHHHh
Confidence            9999999999999999999987542111133222211110 112222333345799999999999999999999999999


Q ss_pred             ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457          163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT  242 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~  242 (371)
                      ++++++.|||+++.+..++++|++|||+|+|++|++++|+|+++|+++|+++++++++++.++++|+++++|+.+ .+++
T Consensus       172 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~-~~~~  250 (374)
T 1cdo_A          172 LLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPND-HSEP  250 (374)
T ss_dssp             GGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGG-CSSC
T ss_pred             hhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccc-cchh
Confidence            999999999998878889999999999999999999999999999978999999999999999999999998753 1146


Q ss_pred             HHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCC-ceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCchhhH
Q 017457          243 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGW-GKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDI  321 (371)
Q Consensus       243 ~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  321 (371)
                      +.+.+++++++++|++||++|....++.+++++++ + |+++.+|.... ....++...++.+.++.|+.+..+...+++
T Consensus       251 ~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~  328 (374)
T 1cdo_A          251 ISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLK-GWGVSVLVGWTDL-HDVATRPIQLIAGRTWKGSMFGGFKGKDGV  328 (374)
T ss_dssp             HHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCT-TTCEEEECSCCSS-SCEEECHHHHHTTCEEEECSGGGCCHHHHH
T ss_pred             HHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhc-CCcEEEEEcCCCC-CCcccCHHHHhcCCeEEEEecCCCCcHHHH
Confidence            88888888877999999999987668999999999 6 99999997443 345677666665339998865544445789


Q ss_pred             HHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEEe
Q 017457          322 ATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM  367 (371)
Q Consensus       322 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~~  367 (371)
                      +++++++++|++.+.++++++|+|+++++||+.+.+++..|+++.|
T Consensus       329 ~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvi~~  374 (374)
T 1cdo_A          329 PKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  374 (374)
T ss_dssp             HHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             HHHHHHHHcCCCChHHheeeEecHHHHHHHHHHHHCCCeeEEEEeC
Confidence            9999999999998878889999999999999999888777999875

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=3e-57  Score=429.56  Aligned_cols=360  Identities=46%  Similarity=0.795  Sum_probs=299.8

Q ss_pred             ccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEee
Q 017457            3 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP   82 (371)
Q Consensus         3 ~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~   82 (371)
                      ..++.+++++++|.|+|+++||||||++++||++|++++.|.++..  .+|.++|||++|+|+++|++|++|++||+|++
T Consensus        13 ~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~P~v~GhE~~G~V~~vG~~V~~~~vGdrV~~   90 (373)
T 2fzw_A           13 WEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEG--CFPVILGHLGAGIVESVGEGVTKLKAGDTVIP   90 (373)
T ss_dssp             CSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTC--CSSBCCCCEEEEEEEEECTTCCSCCTTCEEEE
T ss_pred             ecCCCCcEEEEeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCCCCC--CCCccccccccEEEEEECCCCCCCCCCCEEEE
Confidence            3455569999999999999999999999999999999999876544  68999999999999999999999999999999


Q ss_pred             ccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhh
Q 017457           83 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC  162 (371)
Q Consensus        83 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa  162 (371)
                      .+...||+|++|+.+.+++|.......+.|+..+|..++. ..|...+++...|+|+||++++++.++++|+++++++||
T Consensus        91 ~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~-~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa  169 (373)
T 2fzw_A           91 LYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFT-CKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVC  169 (373)
T ss_dssp             CSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEE-ETTEEEBCCTTTCCSBSEEEEEGGGEEECCTTSCHHHHG
T ss_pred             CCCCCCCCChHHcCcCcccCCCcccccccccccCCccccc-ccccccccccCCccceeEEEEchhheEECCCCCCHHHHh
Confidence            9999999999999999999986431000122222211100 012222333345799999999999999999999999999


Q ss_pred             ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457          163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT  242 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~  242 (371)
                      ++++++.|||+++.+..++++|++|||+|+|++|++++|+|+++|+++|+++++++++++.++++|+++++++.+ ...+
T Consensus       170 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~-~~~~  248 (373)
T 2fzw_A          170 LLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQD-FSKP  248 (373)
T ss_dssp             GGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGG-CSSC
T ss_pred             hhccHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecccc-cccc
Confidence            999999999998878889999999999999999999999999999977999999999999999999999998753 1146


Q ss_pred             HHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCC-ceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCchhhH
Q 017457          243 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGW-GKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDI  321 (371)
Q Consensus       243 ~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  321 (371)
                      +.+.+++++++++|+|||++|....++.+++++++ . |+++.+|.........++...++.+.++.|+.+..+...+++
T Consensus       249 ~~~~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~  327 (373)
T 2fzw_A          249 IQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHK-GWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESV  327 (373)
T ss_dssp             HHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCT-TTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCCHHHHH
T ss_pred             HHHHHHHHhCCCCCEEEECCCcHHHHHHHHHhhcc-CCcEEEEEecCCCCceeeeCHHHHhcCCEEEEeccCCCCcHHHH
Confidence            88889888877999999999987668999999999 6 999999975433345666666655339998865544445789


Q ss_pred             HHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEEe
Q 017457          322 ATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM  367 (371)
Q Consensus       322 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~~  367 (371)
                      +++++++++|++.+.++++++|+|+++++||+.+.+++..|+++.+
T Consensus       328 ~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvi~~  373 (373)
T 2fzw_A          328 PKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  373 (373)
T ss_dssp             HHHHHHHHTTSSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             HHHHHHHHcCCCCchheEeEEeeHHHHHHHHHHHhCCCcceEEEeC
Confidence            9999999999998888889999999999999999888777999874

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=8.6e-57  Score=426.76  Aligned_cols=356  Identities=39%  Similarity=0.711  Sum_probs=296.7

Q ss_pred             ccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEee
Q 017457            3 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP   82 (371)
Q Consensus         3 ~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~   82 (371)
                      ..++.+++++++|.|+|+++||||||++++||++|++++.|. +..  .+|.++|||++|+|+++|++|++|++||+|++
T Consensus        15 ~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-~~~--~~P~v~GhE~~G~V~~vG~~v~~~~vGdrV~~   91 (376)
T 1e3i_A           15 WKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK-KKA--LFPVVLGHECAGIVESVGPGVTNFKPGDKVIP   91 (376)
T ss_dssp             CSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTT-SCC--CSSBCCCCEEEEEEEEECTTCCSCCTTCEEEE
T ss_pred             ecCCCCeEEEEeeCCCCCCCeEEEEEeEEeEchhhHHHhcCC-CCC--CCCcccCccccEEEEEECCCCccCCCCCEEEE
Confidence            345556999999999999999999999999999999999886 333  68999999999999999999999999999999


Q ss_pred             ccCCCCCCCccccCCCCCCCCCCCC----CCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCc
Q 017457           83 IFHRDCGECRDCKSSKSNTCSKFGR----GYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPL  158 (371)
Q Consensus        83 ~~~~~~~~c~~~~~~~~~~~~~~~~----~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~  158 (371)
                      .+...||+|++|+.+++++|.....    ..+.|+..+|..++ ...|...+++...|+|+||++++++.++++|+++++
T Consensus        92 ~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~-~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~  170 (376)
T 1e3i_A           92 FFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRF-TCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANL  170 (376)
T ss_dssp             CSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSE-EETTEEEBCCTTTCCSBSEEEEEGGGEEECCTTCCH
T ss_pred             CCcCCCCCCccccCCCcccCcCcCccccccccccccccCcccc-ccCCcccccccCCccceeEEEeccccEEECCCCCCH
Confidence            9999999999999999999986441    00012222221100 000111222333479999999999999999999999


Q ss_pred             chhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCC
Q 017457          159 GIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATC  238 (371)
Q Consensus       159 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~  238 (371)
                      ++||++++++.|||+++.+.+++++|++|||+|+|++|++++|+||++|+++|+++++++++++.++++|+++++|+.+ 
T Consensus       171 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~-  249 (376)
T 1e3i_A          171 ERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRE-  249 (376)
T ss_dssp             HHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGG-
T ss_pred             HHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEcccc-
Confidence            9999999999999998878889999999999999999999999999999978999999999999999999999998763 


Q ss_pred             CCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCC-ceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCC
Q 017457          239 GDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGW-GKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLK  316 (371)
Q Consensus       239 ~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~  316 (371)
                      .++++.+.+++++++++|+|||++|+...++.+++++++ + |+++.+|..  .....++...++. + ++.|+.+..+.
T Consensus       250 ~~~~~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~-~~G~iv~~G~~--~~~~~~~~~~~~~~~-~i~g~~~~~~~  325 (376)
T 1e3i_A          250 LDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVL-GWGSCTVVGAK--VDEMTIPTVDVILGR-SINGTFFGGWK  325 (376)
T ss_dssp             CSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCT-TTCEEEECCCS--SSEEEEEHHHHHTTC-EEEECSGGGCC
T ss_pred             ccchHHHHHHHHhCCCccEEEECCCCHHHHHHHHHHhhc-CCCEEEEECCC--CCccccCHHHhhccC-eEEEEecCCCC
Confidence            114688889888877999999999987668999999999 5 999999972  3345666666665 6 99988655444


Q ss_pred             chhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEEe
Q 017457          317 PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM  367 (371)
Q Consensus       317 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~~  367 (371)
                      ..++++++++++++|++.+.++++++|+|+++++|++.+.+++..|+++.+
T Consensus       326 ~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~Kvvi~~  376 (376)
T 1e3i_A          326 SVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGKSIRTILTF  376 (376)
T ss_dssp             HHHHHHHHHHHHHTTSSCGGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             cHHHHHHHHHHHHcCCCCcHHhEeeeecHHHHHHHHHHHhcCCcceEEEeC
Confidence            457899999999999998888889999999999999999888767999874

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.7e-57  Score=429.48  Aligned_cols=356  Identities=28%  Similarity=0.522  Sum_probs=297.2

Q ss_pred             cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457            4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI   83 (371)
Q Consensus         4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~   83 (371)
                      .++.+++++++|.|+|+++||||||++++||++|++++.|.++ .  .+|.++|||++|+|+++|++|++|++||+|++.
T Consensus        14 ~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~--~~P~v~GhE~~G~V~~vG~~v~~~~~GdrV~~~   90 (371)
T 1f8f_A           14 CKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP-V--PLPAVLGHEGSGIIEAIGPNVTELQVGDHVVLS   90 (371)
T ss_dssp             STTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-C--CSSBCCCCEEEEEEEEECTTCCSCCTTCEEEEC
T ss_pred             CCCCCeEEEEecCCCCCCCEEEEEEEEeecCchhHHHHcCCCC-C--CCCcccCcccceEEEEeCCCCCCCCCCCEEEec
Confidence            3455699999999999999999999999999999999998764 2  579999999999999999999999999999999


Q ss_pred             cCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcee-ecccCcccccceeeeecceeEECCCCCCcchhh
Q 017457           84 FHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVI-HHFLNISSFTEYSVVDITHVVKITPHIPLGIAC  162 (371)
Q Consensus        84 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~-~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa  162 (371)
                      + ..||+|++|+++++++|.........|+..+|..++....|... .++...|+|+||+++++++++++|+++++++||
T Consensus        91 ~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa  169 (371)
T 1f8f_A           91 Y-GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLG  169 (371)
T ss_dssp             C-CCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECTTSCGGGTG
T ss_pred             C-CCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeEEechhheEECCCCCCHHHHH
Confidence            9 99999999999999999865410001221222110000000000 112234699999999999999999999999999


Q ss_pred             ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457          163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT  242 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~  242 (371)
                      .+++++.|||+++.+.+++++|++|||+|+|++|++++|+|+++|+++|++++++++++++++++|+++++++++   .+
T Consensus       170 ~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~---~~  246 (371)
T 1f8f_A          170 PLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKT---QD  246 (371)
T ss_dssp             GGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTT---SC
T ss_pred             HhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCc---cC
Confidence            999999999998878889999999999999999999999999999967999999999999999999999999887   78


Q ss_pred             HHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhhH
Q 017457          243 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDI  321 (371)
Q Consensus       243 ~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~  321 (371)
                      +.+.+++++++++|+|||++|....++.++++++++ |+++.+|.........++...++. ++++.|+....+...+++
T Consensus       247 ~~~~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~  325 (371)
T 1f8f_A          247 PVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFI  325 (371)
T ss_dssp             HHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEE-EEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGGGSCHHHHH
T ss_pred             HHHHHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcC-CEEEEeCCCCCCCccccCHHHHHhCCCEEEEeCCCCCchHHHH
Confidence            889999988779999999999876689999999998 999999975433345666666555 899999876544345679


Q ss_pred             HHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEEeC
Q 017457          322 ATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWMD  368 (371)
Q Consensus       322 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~~~  368 (371)
                      +++++++++|++.+.+++++ |+|+++++|++.+.+++..|+++.++
T Consensus       326 ~~~~~l~~~g~l~~~~~i~~-~~l~~~~~A~~~~~~~~~~Kvvv~~~  371 (371)
T 1f8f_A          326 PELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSRKGITLKPIIKIA  371 (371)
T ss_dssp             HHHHHHHHTTSCCGGGGEEE-EEGGGHHHHHHHHHHTSCSEEEEECC
T ss_pred             HHHHHHHHcCCCCcccceeE-ecHHHHHHHHHHHHCCCceEEEEeeC
Confidence            99999999999988888888 99999999999998877779999863

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=2.7e-57  Score=428.86  Aligned_cols=330  Identities=22%  Similarity=0.398  Sum_probs=293.5

Q ss_pred             CCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccC
Q 017457            6 GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH   85 (371)
Q Consensus         6 ~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~   85 (371)
                      ..+++++++|.|+|++|||+|||.|++||++|++++.|.++ .  .+|.++|||++|+|+++|++|++|++||+|++.+.
T Consensus        32 ~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~-~--~~p~v~G~e~~G~V~~vG~~v~~~~vGdrV~~~~~  108 (370)
T 4ej6_A           32 VGNISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFP-S--TPPVTLGHEFCGIVVEAGSAVRDIAPGARITGDPN  108 (370)
T ss_dssp             TTEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTSSC-C--CSSEECCCSEEEEEEEECTTCCSSCTTCEEEECCE
T ss_pred             CCceEEEEccCCCCCCCeEEEEEEEEeecHHHHHHHcCCCC-C--CCCeecCcceEEEEEEECCCCCCCCCCCEEEECCC
Confidence            34689999999999999999999999999999999999863 2  68999999999999999999999999999999999


Q ss_pred             CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccc
Q 017457           86 RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLS  165 (371)
Q Consensus        86 ~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~  165 (371)
                      ..|+.|++|+.+.+++|.....   .|+..+|                   +|+||++++++.++++|+++++++|| +.
T Consensus       109 ~~cg~C~~C~~g~~~~C~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~~P~~~~~~~aa-l~  165 (370)
T 4ej6_A          109 ISCGRCPQCQAGRVNLCRNLRA---IGIHRDG-------------------GFAEYVLVPRKQAFEIPLTLDPVHGA-FC  165 (370)
T ss_dssp             ECCSSSHHHHTTCGGGCTTCEE---BTTTBCC-------------------SSBSEEEEEGGGEEEECTTSCTTGGG-GH
T ss_pred             CCCCCChHHhCcCcccCCCccc---cCCCCCC-------------------cceEEEEEchhhEEECCCCCCHHHHh-hh
Confidence            9999999999999999998764   5665555                   99999999999999999999999998 55


Q ss_pred             cchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHH
Q 017457          166 CGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQ  245 (371)
Q Consensus       166 ~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~  245 (371)
                      .++.|||+++ +.+++++|++|||+|+|++|++++|+|+++|+++|+++++++++++.++++|+++++|+.+   .++.+
T Consensus       166 ~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~---~~~~~  241 (370)
T 4ej6_A          166 EPLACCLHGV-DLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSA---GDVVE  241 (370)
T ss_dssp             HHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTS---SCHHH
T ss_pred             hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCC---cCHHH
Confidence            5999999976 7889999999999999999999999999999988999999999999999999999999887   78989


Q ss_pred             HHHH---hhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhhH
Q 017457          246 VIKE---MTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDI  321 (371)
Q Consensus       246 ~i~~---~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~  321 (371)
                      .+++   ++++++|+|||++|+...++.++++++++ |+++.+|.........++...++. ++++.|+....    .++
T Consensus       242 ~i~~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~-G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~----~~~  316 (370)
T 4ej6_A          242 AIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAG-GTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINP----FVH  316 (370)
T ss_dssp             HHHSTTSSSTTCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECSCCCTTCCCCCCHHHHHHTTCEEEECCSCT----TCH
T ss_pred             HHHhhhhccCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEeccCCCCccccCHHHHHhCCcEEEEeccCh----HHH
Confidence            9888   77779999999999877799999999998 999999975544456777777666 89999986443    468


Q ss_pred             HHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCce--eeEEEEeCcC
Q 017457          322 ATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS--LRCIIWMDKL  370 (371)
Q Consensus       322 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~--~kvvv~~~~~  370 (371)
                      +++++++++|++.+.++++++|+|+++++|++.+.++..  .|++++++++
T Consensus       317 ~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~kvv~~~~~i  367 (370)
T 4ej6_A          317 RRAADLVATGAIEIDRMISRRISLDEAPDVISNPAAAGEVKVLVIPSAERV  367 (370)
T ss_dssp             HHHHHHHHTTCSCCGGGEEEEECGGGHHHHHHSCCCTTCSEEEECCC----
T ss_pred             HHHHHHHHcCCCChhHcEEEEEEHHHHHHHHHHHHcCCCCeEEEEEccccc
Confidence            999999999999999999999999999999999988663  3899888765

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=4e-56  Score=416.64  Aligned_cols=328  Identities=25%  Similarity=0.407  Sum_probs=292.0

Q ss_pred             cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEE-ee
Q 017457            4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLV-LP   82 (371)
Q Consensus         4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V-~~   82 (371)
                      +++.+++++++|.|+|++|||||||.+++||++|++.+.|.++... .+|.++|||++|+|+++|++|++|++||+| +.
T Consensus        10 ~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~-~~P~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~   88 (340)
T 3s2e_A           10 AFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKP-TLPFIPGHEGVGYVSAVGSGVSRVKEGDRVGVP   88 (340)
T ss_dssp             STTSCCEEEEEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSSSCC-CSSBCCCSEEEEEEEEECSSCCSCCTTCEEEEE
T ss_pred             cCCCCCEEEEccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCCCCC-CCCcccCCcceEEEEEECCCCCcCCCCCEEEec
Confidence            4566799999999999999999999999999999999999876432 789999999999999999999999999999 56


Q ss_pred             ccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhh
Q 017457           83 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC  162 (371)
Q Consensus        83 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa  162 (371)
                      ++...|+.|.+|+.++++.|.....   .|+..+|                   +|+||++++++.++++|+++++++||
T Consensus        89 ~~~~~cg~C~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~iP~~~~~~~aa  146 (340)
T 3s2e_A           89 WLYSACGYCEHCLQGWETLCEKQQN---TGYSVNG-------------------GYGEYVVADPNYVGLLPDKVGFVEIA  146 (340)
T ss_dssp             SEEECCSSSHHHHTTCGGGCTTCEE---BTTTBCC-------------------SSBSEEEECTTTSEECCTTSCHHHHG
T ss_pred             CCCCCCCCChHHhCcCcccCccccc---cCCCCCC-------------------cceeEEEechHHEEECCCCCCHHHhh
Confidence            7788999999999999999998764   5666665                   99999999999999999999999999


Q ss_pred             ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457          163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT  242 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~  242 (371)
                      .+++++.|||+++ +..++++|++|||+|+|++|++++|+|+++|+ +|++++++++++++++++|+++++|+++   .+
T Consensus       147 ~l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~i~~~~---~~  221 (340)
T 3s2e_A          147 PILCAGVTVYKGL-KVTDTRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAEVAVNARD---TD  221 (340)
T ss_dssp             GGGTHHHHHHHHH-HTTTCCTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEETTT---SC
T ss_pred             cccchhHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCCEEEeCCC---cC
Confidence            9999999999976 67799999999999999999999999999999 9999999999999999999999999887   78


Q ss_pred             HHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhhH
Q 017457          243 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDI  321 (371)
Q Consensus       243 ~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~  321 (371)
                      +.+.+++ +.+++|++||++++...++.++++++++ |+++.+|...  ....++...++. ++++.|+....   .+++
T Consensus       222 ~~~~~~~-~~g~~d~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~~~~~i~g~~~~~---~~~~  294 (340)
T 3s2e_A          222 PAAWLQK-EIGGAHGVLVTAVSPKAFSQAIGMVRRG-GTIALNGLPP--GDFGTPIFDVVLKGITIRGSIVGT---RSDL  294 (340)
T ss_dssp             HHHHHHH-HHSSEEEEEESSCCHHHHHHHHHHEEEE-EEEEECSCCS--SEEEEEHHHHHHTTCEEEECCSCC---HHHH
T ss_pred             HHHHHHH-hCCCCCEEEEeCCCHHHHHHHHHHhccC-CEEEEeCCCC--CCCCCCHHHHHhCCeEEEEEecCC---HHHH
Confidence            8888888 4458999999999888799999999998 9999999743  345566665555 89999986443   5789


Q ss_pred             HHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEeCc
Q 017457          322 ATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDK  369 (371)
Q Consensus       322 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~~~  369 (371)
                      +++++++++|++.+.  + ++++|+++++||+.+.+++.. |+++++++
T Consensus       295 ~~~~~l~~~g~l~~~--~-~~~~l~~~~~A~~~~~~~~~~Gkvvv~~~~  340 (340)
T 3s2e_A          295 QESLDFAAHGDVKAT--V-STAKLDDVNDVFGRLREGKVEGRVVLDFSR  340 (340)
T ss_dssp             HHHHHHHHTTSCCCC--E-EEECGGGHHHHHHHHHTTCCCSEEEEECCC
T ss_pred             HHHHHHHHhCCCCce--E-EEEeHHHHHHHHHHHHcCCCceEEEEecCC
Confidence            999999999988753  4 788999999999999998765 99999875

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=8.4e-56  Score=415.58  Aligned_cols=334  Identities=22%  Similarity=0.343  Sum_probs=291.2

Q ss_pred             CccCCCCcEEEEEecCC-CCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEE
Q 017457            2 QRIPGKPLVIEEIEVEP-PKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLV   80 (371)
Q Consensus         2 ~~~~~~~l~~~~~~~~~-~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V   80 (371)
                      ++.....++++|+|.|+ +++|||||||.|++||++|++.+.|..+.   .+|.++|||++|+|+++|++|+++++||+|
T Consensus         5 v~~~~g~l~v~e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~~~---~~P~i~G~E~~G~V~~vG~~V~~~~~GdrV   81 (346)
T 4a2c_A            5 VNDTDGIVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGAH---YYPITLGHEFSGYIDAVGSGVDDLHPGDAV   81 (346)
T ss_dssp             EECSSSCEEEEECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSCSS---SSSBCCCCEEEEEEEEECTTCCSCCTTCEE
T ss_pred             EEecCCCEEEEEEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCCCC---CCCccccEEEEEEEEEECCCcccccCCCeE
Confidence            34455569999999998 57999999999999999999999886543   689999999999999999999999999999


Q ss_pred             eeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcch
Q 017457           81 LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI  160 (371)
Q Consensus        81 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~  160 (371)
                      ++.+...|++|.+|..+.+++|.....   .|...+|                   +|+||+++++++++++|+++|+++
T Consensus        82 ~~~~~~~~g~c~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~iP~~l~~~~  139 (346)
T 4a2c_A           82 ACVPLLPCFTCPECLKGFYSQCAKYDF---IGSRRDG-------------------GFAEYIVVKRKNVFALPTDMPIED  139 (346)
T ss_dssp             EECCEECCSCSHHHHTTCGGGCSSCEE---BTTTBCC-------------------SSBSEEEEEGGGEEECCTTSCGGG
T ss_pred             EeeeccCCCCcccccCCccccCCCccc---ccCCCCc-------------------ccccccccchheEEECCCCCCHHH
Confidence            999999999999999999999998775   6666666                   999999999999999999999999


Q ss_pred             hhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCC
Q 017457          161 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD  240 (371)
Q Consensus       161 aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~  240 (371)
                      ||+++ .+.++++ +....++++|++|||+|+|++|++++|+|+++|+..+++++++++|+++++++|+++++|+.+   
T Consensus       140 aa~l~-~~~~~~~-~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~---  214 (346)
T 4a2c_A          140 GAFIE-PITVGLH-AFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSE---  214 (346)
T ss_dssp             GGGHH-HHHHHHH-HHHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTT---
T ss_pred             HHhch-HHHHHHH-HHHHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCC---
Confidence            99876 5555555 567889999999999999999999999999999977889999999999999999999999988   


Q ss_pred             ccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCce-ecCHHHHhc-CceEEEeeccCCC-
Q 017457          241 KTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPI-SLNSIEILK-GRSVCGTYFGGLK-  316 (371)
Q Consensus       241 ~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~-~~~~~~~~~-~~~~~g~~~~~~~-  316 (371)
                      .++.+.++.++++ ++|+|+|++|.+..++.++++++++ |+++.+|........ ..+...++. ++++.|+...... 
T Consensus       215 ~~~~~~~~~~~~~~g~d~v~d~~G~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~~~~~~  293 (346)
T 4a2c_A          215 MSAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPH-AQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSP  293 (346)
T ss_dssp             SCHHHHHHHHGGGCSSEEEEECSCSHHHHHHHHHHCCTT-CEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCTTCCSS
T ss_pred             CCHHHHHHhhcccCCcccccccccccchhhhhhheecCC-eEEEEEeccCCCccccccCHHHHhhceeEEEEEeccccCc
Confidence            7888888888887 9999999999988799999999998 999999975443222 233334444 8999998654322 


Q ss_pred             -chhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEE
Q 017457          317 -PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW  366 (371)
Q Consensus       317 -~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~  366 (371)
                       ..++++++++++++|++++.++++++|+|+++++|++.+.+++.. |+||.
T Consensus       294 ~~~~~~~~~~~l~~~g~l~~~~lI~~~~~l~~~~~A~~~l~~~~~~GKvVl~  345 (346)
T 4a2c_A          294 WPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLI  345 (346)
T ss_dssp             TTCHHHHHHHHHHHTTCSCCGGGEEEEECHHHHHHHHHHHTTSCCCSEEEEC
T ss_pred             chHHHHHHHHHHHHcCCCCCCccEeEEEeHHHHHHHHHHHHcCCCceEEEEE
Confidence             346799999999999999999999999999999999999887765 99885

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=6.5e-56  Score=417.10  Aligned_cols=334  Identities=23%  Similarity=0.336  Sum_probs=289.7

Q ss_pred             CCCcEEEEEecCCCCCCeEEEEEeEeeccccccc-ccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeecc
Q 017457            6 GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVT-FWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIF   84 (371)
Q Consensus         6 ~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~-~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~   84 (371)
                      ...++++++|.|+|++|||||||++++||++|++ ++.|.++.   .+|.++|||++|+|+++|++|++|++||+|++.+
T Consensus         9 ~~~~~~~e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~---~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~   85 (352)
T 3fpc_A            9 IGKVGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGE---RHNMILGHEAVGEVVEVGSEVKDFKPGDRVVVPA   85 (352)
T ss_dssp             TTEEEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTCC---CSSEECCCEEEEEEEEECTTCCSCCTTCEEEECS
T ss_pred             CCCceEEeCCCCCCCCCeEEEEeCEEeEcccchHHHhCCCCCC---CCCcccCCcceEEEEEECCCCCcCCCCCEEEEcc
Confidence            3448899999999999999999999999999999 55776543   5799999999999999999999999999999999


Q ss_pred             CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecc--eeEECCCCCCcchhh
Q 017457           85 HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKITPHIPLGIAC  162 (371)
Q Consensus        85 ~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~~P~~l~~~~aa  162 (371)
                      ...|+.|.+|+.++++.|.....+...+...+                   |+|+||+.+++.  .++++|+++++++|+
T Consensus        86 ~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~~-------------------G~~aey~~v~~~~~~~~~iP~~~~~~~aa  146 (352)
T 3fpc_A           86 ITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKD-------------------GVFGEFFHVNDADMNLAHLPKEIPLEAAV  146 (352)
T ss_dssp             BCCCSSSHHHHTTCGGGTTSTTTTBCBTTTBC-------------------CSSBSCEEESSHHHHCEECCTTSCHHHHT
T ss_pred             ccCCCCchhhcCCCcCCccccccccccccCCC-------------------CcccceEEeccccCeEEECCCCCCHHHHh
Confidence            99999999999999999876543222233333                   499999999976  999999999999999


Q ss_pred             ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457          163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT  242 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~  242 (371)
                      .+++++.|||+++ +..++++|++|||+|+|++|++++|+|+++|+++|++++++++|++.++++|+++++++++   .+
T Consensus       147 ~~~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~---~~  222 (352)
T 3fpc_A          147 MIPDMMTTGFHGA-ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKN---GD  222 (352)
T ss_dssp             TTTTHHHHHHHHH-HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGG---SC
T ss_pred             hccchhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCC---cC
Confidence            9998999999976 7889999999999999999999999999999978999999999999999999999999887   78


Q ss_pred             HHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHH---hcCceEEEeeccCCCch
Q 017457          243 VSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI---LKGRSVCGTYFGGLKPR  318 (371)
Q Consensus       243 ~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~---~~~~~~~g~~~~~~~~~  318 (371)
                      +.+.+++++++ ++|+|||++|++..++.++++++++ |+++.+|........+++...+   ++++++.|+...  ...
T Consensus       223 ~~~~v~~~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~--~~~  299 (352)
T 3fpc_A          223 IVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPG-SDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCP--GGR  299 (352)
T ss_dssp             HHHHHHHHTTTCCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBCCC--CHH
T ss_pred             HHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEecccCCCCceecchhHhhhhccccEEEEeecc--Cch
Confidence            99999999988 9999999999976699999999998 9999999755444444443322   346788887432  225


Q ss_pred             hhHHHHHHHHHcCCCCCCCceeEEEe-cccHHHHHHHHhcCc-e-eeEEEEeC
Q 017457          319 SDIATLAQKYLDKELNLGEFITHEVS-FHDINKAFDLLLEGK-S-LRCIIWMD  368 (371)
Q Consensus       319 ~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~a~~~~~~~~-~-~kvvv~~~  368 (371)
                      ++++++++++++|++.+.++++++|+ |+++++||+.+.++. . .|++++++
T Consensus       300 ~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~~~~Kvvi~~~  352 (352)
T 3fpc_A          300 LRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVILA  352 (352)
T ss_dssp             HHHHHHHHHHHTTSCCGGGGEEEEEESTTHHHHHHHHHHSCCTTCSEEEEECC
T ss_pred             hHHHHHHHHHHcCCCChhHhheeeCCCHHHHHHHHHHHHhCCCCcEEEEEEeC
Confidence            67999999999999999888999999 999999999998854 3 49999874

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=1.9e-55  Score=413.29  Aligned_cols=331  Identities=26%  Similarity=0.415  Sum_probs=277.1

Q ss_pred             CCCCcEEEEEecCCCCCCeEEEEEeEeeccccccccccc-CCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457            5 PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKS-STDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI   83 (371)
Q Consensus         5 ~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g-~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~   83 (371)
                      ++.+++++++|.|+|+++||||||.+++||++|++.+.| .++.....+|.++|||++|+|+++|++|++|++||+|++.
T Consensus        13 ~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~   92 (348)
T 2d8a_A           13 PGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGVEGIEVGDYVSVE   92 (348)
T ss_dssp             SSSSCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEEEEEEEEECTTCCSCCTTCEEEEC
T ss_pred             CCCCEEEEECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccceEEEEEECCCCCcCCCCCEEEEc
Confidence            343799999999999999999999999999999999988 4321011688999999999999999999999999999999


Q ss_pred             cCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhc
Q 017457           84 FHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL  163 (371)
Q Consensus        84 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~  163 (371)
                      +...|++|++|+.+++++|.....   .|...+|                   +|+||++++++.++++|+++++++||+
T Consensus        93 ~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~iP~~~~~~~aa~  150 (348)
T 2d8a_A           93 THIVCGKCYACRRGQYHVCQNTKI---FGVDTDG-------------------VFAEYAVVPAQNIWKNPKSIPPEYATL  150 (348)
T ss_dssp             CEECCSCCC------------CEE---TTTSSCC-------------------SSBSEEEEEGGGEEECCTTSCHHHHTT
T ss_pred             CCCCCCCChhhhCcCcccCCCCCe---ecCCCCC-------------------cCcceEEeChHHeEECCCCCCHHHHHh
Confidence            999999999999999999987653   4544444                   999999999999999999999999998


Q ss_pred             cccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccH
Q 017457          164 LSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTV  243 (371)
Q Consensus       164 ~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~  243 (371)
                      ++ ++.|||+++ +..++ +|++|||+|+|++|++++|+|+++|+++|+++++++++++.++++|+++++++++   +++
T Consensus       151 ~~-~~~ta~~~l-~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~---~~~  224 (348)
T 2d8a_A          151 QE-PLGNAVDTV-LAGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFE---EDV  224 (348)
T ss_dssp             HH-HHHHHHHHH-TTSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTT---SCH
T ss_pred             hh-HHHHHHHHH-HhcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCC---cCH
Confidence            86 888999987 67888 9999999999999999999999999878999999999999999999999999877   789


Q ss_pred             HHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCH-HHHhc-CceEEEeeccCCCchhh
Q 017457          244 SQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNS-IEILK-GRSVCGTYFGGLKPRSD  320 (371)
Q Consensus       244 ~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~-~~~~~g~~~~~~~~~~~  320 (371)
                      .+.+++++++ ++|+|||++|....++.++++++++ |+++.+|....  ...++. ..++. ++++.|+....  ..++
T Consensus       225 ~~~v~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~--~~~~~~~~~~~~~~~~i~g~~~~~--~~~~  299 (348)
T 2d8a_A          225 VKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPA-GRVSLLGLYPG--KVTIDFNNLIIFKALTIYGITGRH--LWET  299 (348)
T ss_dssp             HHHHHHHTTTSCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECCCCSS--CCCCCHHHHTTTTTCEEEECCCCC--SHHH
T ss_pred             HHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCC--CcccCchHHHHhCCcEEEEecCCC--cHHH
Confidence            9999999987 9999999999866689999999998 99999997433  345665 55544 88999875332  1567


Q ss_pred             HHHHHHHHHcCCCCCCCceeEEEe-cccHHHHHHHHhcCceeeEEEEeC
Q 017457          321 IATLAQKYLDKELNLGEFITHEVS-FHDINKAFDLLLEGKSLRCIIWMD  368 (371)
Q Consensus       321 ~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~a~~~~~~~~~~kvvv~~~  368 (371)
                      ++++++++++|++++.++++++|+ |+++++|++.+.++..+|+++.++
T Consensus       300 ~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~gKvvi~~~  348 (348)
T 2d8a_A          300 WYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELMRAGKTGKVVFMLK  348 (348)
T ss_dssp             HHHHHHHHHHTCCCCTTTEEEEEESSTTHHHHHHHHHTTCCSEEEEEC-
T ss_pred             HHHHHHHHHcCCCChHHhheeeCCCHHHHHHHHHHHhCCCceEEEEeeC
Confidence            999999999999888888999999 999999999997755559999864

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=2.4e-55  Score=412.19  Aligned_cols=331  Identities=25%  Similarity=0.408  Sum_probs=285.6

Q ss_pred             cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457            4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI   83 (371)
Q Consensus         4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~   83 (371)
                      +++++++++++|.|+|++|||||||++++||++|++.+.|.++.....+|.++|||++|+|+++|++|++|++||+|++.
T Consensus         8 ~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~vGdrV~~~   87 (345)
T 3jv7_A            8 EIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGVGDAVAVY   87 (345)
T ss_dssp             STTSCCEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTTCCSCSSEECCSEEEEEEEEECTTCCSCCTTCEEEEC
T ss_pred             CCCCceEEEEecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCccCCCCCcccCcccEEEEEEECCCCCCCCCCCEEEEe
Confidence            45556999999999999999999999999999999999987653323789999999999999999999999999999999


Q ss_pred             cCCCCCCCccccCCCCCCCCCCCC-C-CCCCCCCCCCccccccCCceeecccCcccccceeeee-cceeEECCCCCCcch
Q 017457           84 FHRDCGECRDCKSSKSNTCSKFGR-G-YRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVD-ITHVVKITPHIPLGI  160 (371)
Q Consensus        84 ~~~~~~~c~~~~~~~~~~~~~~~~-~-~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~-~~~~~~~P~~l~~~~  160 (371)
                      +...|+.|++|+.+.+++|..... + ...|+..+                   |+|+||++++ ++.++++|+ +++++
T Consensus        88 ~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~~~-------------------G~~aey~~v~~~~~~~~~p~-~~~~~  147 (345)
T 3jv7_A           88 GPWGCGACHACARGRENYCTRAADLGITPPGLGSP-------------------GSMAEYMIVDSARHLVPIGD-LDPVA  147 (345)
T ss_dssp             CSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTTBC-------------------CSSBSEEEESCGGGEEECTT-CCHHH
T ss_pred             cCCCCCCChHHHCcCcCcCccccccccccCCcCCC-------------------ceeeEEEEecchhceEeCCC-CCHHH
Confidence            999999999999999999954321 0 00222233                   4999999999 999999999 99999


Q ss_pred             hhccccchhhhHHHHHH-HcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCC
Q 017457          161 ACLLSCGVSTGVGAAWK-VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG  239 (371)
Q Consensus       161 aa~~~~~~~ta~~~l~~-~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~  239 (371)
                      ||.++++++|||+++.+ ...+++|++|||+|+|++|++++|+|+++|..+|++++++++|++.++++|+++++++++  
T Consensus       148 aa~l~~~~~ta~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~--  225 (345)
T 3jv7_A          148 AAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGA--  225 (345)
T ss_dssp             HGGGGTTTHHHHHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECST--
T ss_pred             hhhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCC--
Confidence            99999999999998766 458999999999999999999999999994449999999999999999999999998765  


Q ss_pred             CccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCc
Q 017457          240 DKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKP  317 (371)
Q Consensus       240 ~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~  317 (371)
                        ++.+.+++++++ ++|+|||++|++..++.++++++++ |+++.+|.... ....++. .++. ++++.++....   
T Consensus       226 --~~~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~-~~~~~~~~i~g~~~~~---  297 (345)
T 3jv7_A          226 --GAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVD-GHISVVGIHAG-AHAKVGF-FMIPFGASVVTPYWGT---  297 (345)
T ss_dssp             --THHHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEE-EEEEECSCCTT-CCEEEST-TTSCTTCEEECCCSCC---
T ss_pred             --cHHHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcC-CEEEEECCCCC-CCCCcCH-HHHhCCCEEEEEecCC---
Confidence              788899999988 9999999999986699999999998 99999997543 2455664 4444 88999875443   


Q ss_pred             hhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEe
Q 017457          318 RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM  367 (371)
Q Consensus       318 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~  367 (371)
                      .++++++++++++|++.+   ++++|+++++++||+.+.+++.. |++|.+
T Consensus       298 ~~~~~~~~~l~~~g~l~~---~~~~~~l~~~~~A~~~~~~~~~~Gkvvv~p  345 (345)
T 3jv7_A          298 RSELMEVVALARAGRLDI---HTETFTLDEGPAAYRRLREGSIRGRGVVVP  345 (345)
T ss_dssp             HHHHHHHHHHHHTTCCCC---CEEEECSTTHHHHHHHHHHTCCSSEEEECC
T ss_pred             HHHHHHHHHHHHcCCCce---EEEEEcHHHHHHHHHHHHcCCCceeEEeCC
Confidence            578999999999998876   35999999999999999988765 998864

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.6e-55  Score=413.86  Aligned_cols=323  Identities=22%  Similarity=0.384  Sum_probs=283.2

Q ss_pred             cCCCCcEEEEEecCC-CCCCeEEEEEeEeecccccccccccCCC---CCCCCCCccccccccEEEEEeCCCCCCcCCCCE
Q 017457            4 IPGKPLVIEEIEVEP-PKAWEIRIKILCTSLCHSDVTFWKSSTD---LPKLPLPVIFGHEAVGVVESVGEYVEEVKERDL   79 (371)
Q Consensus         4 ~~~~~l~~~~~~~~~-~~~~eVlVkv~~~~i~~~D~~~~~g~~~---~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~   79 (371)
                      .++.+++++++|.|+ |++|||||||.+++||++|++.+.|.++   ..  .+|.++|||++|+|+++|++|++|++||+
T Consensus        23 ~~g~~l~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~--~~p~v~G~E~~G~V~~vG~~v~~~~vGdr  100 (359)
T 1h2b_A           23 EYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQP--KLPYTLGHENVGYIEEVAEGVEGLEKGDP  100 (359)
T ss_dssp             STTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCC--CSSEECCCCEEEEEEEECTTCCSCCTTCE
T ss_pred             cCCCCcEEEEccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCC--CCCeecCcCceEEEEEECCCCCCCCCCCE
Confidence            344469999999999 9999999999999999999999998764   23  68999999999999999999999999999


Q ss_pred             EeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcc
Q 017457           80 VLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLG  159 (371)
Q Consensus        80 V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~  159 (371)
                      |+..+...||.|++|+.+.+++|.....   .|+..+|                   +|+||+++++++++++|++++++
T Consensus       101 V~~~~~~~Cg~C~~C~~g~~~~C~~~~~---~G~~~~G-------------------~~aey~~v~~~~~~~iP~~~~~~  158 (359)
T 1h2b_A          101 VILHPAVTDGTCLACRAGEDMHCENLEF---PGLNIDG-------------------GFAEFMRTSHRSVIKLPKDISRE  158 (359)
T ss_dssp             EEECSCBCCSCSHHHHTTCGGGCTTCBC---BTTTBCC-------------------SSBSEEEECGGGEEECCTTCCHH
T ss_pred             EEeCCCCCCCCChhhhCcCcccCCCccc---cccCCCC-------------------cccceEEechHhEEECCCCCCHH
Confidence            9999899999999999999999987653   4554454                   99999999999999999999999


Q ss_pred             hhh---ccccchhhhHHHHHHH-cCCCCCCeEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHHhCcceEEc
Q 017457          160 IAC---LLSCGVSTGVGAAWKV-AGVEVGSTVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKFGITDFIN  234 (371)
Q Consensus       160 ~aa---~~~~~~~ta~~~l~~~-~~~~~g~~VLI~G~g~~G~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~lga~~v~~  234 (371)
                      +||   .+++++.|||+++.+. .++++|++|||+|+|++|++++|+||++ |+ +|++++++++++++++++|+++++|
T Consensus       159 ~aa~~~~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~  237 (359)
T 1h2b_A          159 KLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPA-TVIALDVKEEKLKLAERLGADHVVD  237 (359)
T ss_dssp             HHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCC-EEEEEESSHHHHHHHHHTTCSEEEE
T ss_pred             HHhhccchhhhHHHHHHHHHhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEeCCHHHHHHHHHhCCCEEEe
Confidence            999   7888999999987655 8999999999999999999999999999 99 8999999999999999999999999


Q ss_pred             CCCCCCccHHHHHHHhhCC-CcCEEEECCCChH--HHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEe
Q 017457          235 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTS--VMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGT  310 (371)
Q Consensus       235 ~~~~~~~~~~~~i~~~~~g-g~d~vid~~g~~~--~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~  310 (371)
                      +++   . +.+.+++++++ ++|+|||++|++.  .++.++++  ++ |+++.+|.....   .++...++. ++++.|+
T Consensus       238 ~~~---~-~~~~v~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~-G~~v~~g~~~~~---~~~~~~~~~~~~~i~g~  307 (359)
T 1h2b_A          238 ARR---D-PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLG--RM-GRLIIVGYGGEL---RFPTIRVISSEVSFEGS  307 (359)
T ss_dssp             TTS---C-HHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEE--EE-EEEEECCCSSCC---CCCHHHHHHTTCEEEEC
T ss_pred             ccc---h-HHHHHHHHhCCCCCcEEEECCCCchHHHHHHHhhc--CC-CEEEEEeCCCCC---CCCHHHHHhCCcEEEEe
Confidence            887   5 88889999987 9999999999985  58888887  87 999999974322   566655544 8999997


Q ss_pred             eccCCCchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCce-eeEEEEe
Q 017457          311 YFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS-LRCIIWM  367 (371)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvv~~  367 (371)
                      ....   .++++++++++++|++.+  .+ ++|+|+++++|++.+.+++. +|+++.+
T Consensus       308 ~~~~---~~~~~~~~~l~~~g~l~~--~i-~~~~l~~~~~A~~~~~~~~~~gKvvv~~  359 (359)
T 1h2b_A          308 LVGN---YVELHELVTLALQGKVRV--EV-DIHKLDEINDVLERLEKGEVLGRAVLIP  359 (359)
T ss_dssp             CSCC---HHHHHHHHHHHHTTSCCC--CE-EEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             cCCC---HHHHHHHHHHHHcCCCcc--eE-EEEeHHHHHHHHHHHHcCCCceEEEeeC
Confidence            5433   578999999999998754  47 99999999999999998875 4999864

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=2.1e-55  Score=412.25  Aligned_cols=329  Identities=25%  Similarity=0.420  Sum_probs=288.6

Q ss_pred             CCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCC---CCCCCCCccccccccEEEEEeCCCCCCcCCCCEEe
Q 017457            5 PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTD---LPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVL   81 (371)
Q Consensus         5 ~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~---~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~   81 (371)
                      ++.+++++++|.|+|++|||||||.+++||++|++.+.|.++   ..  .+|.++|||++|+|+++|++|++|++||+|+
T Consensus         9 ~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~--~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~   86 (343)
T 2dq4_A            9 PEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRI--RPPLVTGHEFSGVVEAVGPGVRRPQVGDHVS   86 (343)
T ss_dssp             SSSSCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHC--CSSEECCCEEEEEEEEECTTCCSSCTTCEEE
T ss_pred             CCCcEEEEeccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCccccC--CCCCcCCccceEEEEEECCCCCcCCCCCEEE
Confidence            344499999999999999999999999999999999988654   23  6889999999999999999999999999999


Q ss_pred             eccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchh
Q 017457           82 PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA  161 (371)
Q Consensus        82 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~a  161 (371)
                      +.+...|+.|++|+.+.+++|.....   .|+..+|                   +|+||+++++++++++|+++++++|
T Consensus        87 ~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~iP~~~~~~~a  144 (343)
T 2dq4_A           87 LESHIVCHACPACRTGNYHVCLNTQI---LGVDRDG-------------------GFAEYVVVPAENAWVNPKDLPFEVA  144 (343)
T ss_dssp             ECCEECCSCSHHHHTTCGGGCTTCEE---BTTTBCC-------------------SSBSEEEEEGGGEEEECTTSCHHHH
T ss_pred             ECCCCCCCCChhhhCcCcccCCCcce---ecCCCCC-------------------cceeEEEEchHHeEECCCCCCHHHH
Confidence            99999999999999999999987653   4444444                   9999999999999999999999999


Q ss_pred             hccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCc
Q 017457          162 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK  241 (371)
Q Consensus       162 a~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~  241 (371)
                      |.+. ++.|||+++.+..++ +|++|||+|+|++|++++|+|+++|+++|+++++++++++.++++ +++++++.+   +
T Consensus       145 a~~~-~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~---~  218 (343)
T 2dq4_A          145 AILE-PFGNAVHTVYAGSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLE---E  218 (343)
T ss_dssp             TTHH-HHHHHHHHHHSTTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTTT---S
T ss_pred             Hhhh-HHHHHHHHHHHhCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcCc---c
Confidence            9885 788999987547888 999999999999999999999999997899999999999999999 999999887   7


Q ss_pred             cHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCH-HHHhc-CceEEEeeccCCCchh
Q 017457          242 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNS-IEILK-GRSVCGTYFGGLKPRS  319 (371)
Q Consensus       242 ~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~-~~~~~g~~~~~~~~~~  319 (371)
                      ++.+.+++++++++|+|||++|+...++.++++++++ |+++.+|...  ....++. ..++. ++++.|+....  ..+
T Consensus       219 ~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~--~~~~~~~~~~~~~~~~~i~g~~~~~--~~~  293 (343)
T 2dq4_A          219 DLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPG-GEARILGIPS--DPIRFDLAGELVMRGITAFGIAGRR--LWQ  293 (343)
T ss_dssp             CHHHHHHHHHSSCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECCCCS--SCEEECHHHHTGGGTCEEEECCSCC--TTH
T ss_pred             CHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCC--CCceeCcHHHHHhCceEEEEeecCC--CHH
Confidence            8899999888339999999999966689999999998 9999999743  3456666 55544 89999985431  246


Q ss_pred             hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEEeC
Q 017457          320 DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWMD  368 (371)
Q Consensus       320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~~~  368 (371)
                      +++++++++++|++++.++++++|+++++++|++.+.+++.+|+++.++
T Consensus       294 ~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~gKvv~~~~  342 (343)
T 2dq4_A          294 TWMQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLLASGQAVKVILDPK  342 (343)
T ss_dssp             HHHHHHHHHHHTSSCCGGGEEEEEEGGGHHHHHHHHHHSSCSEEEEETT
T ss_pred             HHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCceEEEEeeC
Confidence            7999999999999888888999999999999999998876689999875

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=2.6e-55  Score=414.71  Aligned_cols=335  Identities=22%  Similarity=0.315  Sum_probs=287.1

Q ss_pred             CccCCCCcEEEEEecC--------CCCCCeEEEEEeEeecccccccccccCC-CCCCCCCCccccccccEEEEEeCCCCC
Q 017457            2 QRIPGKPLVIEEIEVE--------PPKAWEIRIKILCTSLCHSDVTFWKSST-DLPKLPLPVIFGHEAVGVVESVGEYVE   72 (371)
Q Consensus         2 ~~~~~~~l~~~~~~~~--------~~~~~eVlVkv~~~~i~~~D~~~~~g~~-~~~~~~~p~~~G~e~~G~Vv~vG~~v~   72 (371)
                      ++.+.++++++++|.|        +|++|||||||.+++||++|++++.+.. ......+|.++|||++|+|+++|++|+
T Consensus        13 ~~~~~~~l~~~~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~   92 (363)
T 3m6i_A           13 FTNPQHDLWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEVIAVHPSVK   92 (363)
T ss_dssp             EECTTCCEEEEECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCC
T ss_pred             EEeCCCcEEEEEecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCcccCcceEEEEEEECCCCC
Confidence            3455667999999999        9999999999999999999999887432 222226799999999999999999999


Q ss_pred             CcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCccccccCCceeecccCcccccceeeeecceeEE
Q 017457           73 EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP-RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVK  151 (371)
Q Consensus        73 ~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~  151 (371)
                      +|++||+|++.+...|+.|++|+.+.++.|.....   .|.. .+                   |+|+||++++++++++
T Consensus        93 ~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~---~g~~~~~-------------------G~~aey~~v~~~~~~~  150 (363)
T 3m6i_A           93 SIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDF---LSTPPVP-------------------GLLRRYVNHPAVWCHK  150 (363)
T ss_dssp             SCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEE---TTSTTSC-------------------CSCBSEEEEEGGGEEE
T ss_pred             CCCCCCEEEEecccCCCCCHHHHCcCcccCCCccc---cCCCCCC-------------------ccceeEEEEehhhEEE
Confidence            99999999999999999999999999999998764   3332 33                   4999999999999999


Q ss_pred             CCCCCCcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcce
Q 017457          152 ITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD  231 (371)
Q Consensus       152 ~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~  231 (371)
                      +|+ +|+++||++. ++.|||+++ +.+++++|++|||+|+|++|++++|+||++|+++|++++++++++++++++ +++
T Consensus       151 iP~-~s~~~aa~~~-~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~  226 (363)
T 3m6i_A          151 IGN-MSYENGAMLE-PLSVALAGL-QRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPE  226 (363)
T ss_dssp             CTT-CCHHHHHHHH-HHHHHHHHH-HHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTT
T ss_pred             CCC-CCHHHHHhhh-HHHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chh
Confidence            999 9999999885 889999986 788999999999999999999999999999995599999999999999999 765


Q ss_pred             EEcCC--CCCCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceE
Q 017457          232 FINPA--TCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSV  307 (371)
Q Consensus       232 v~~~~--~~~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~  307 (371)
                      ++++.  ..+.+++.+.+++++++ ++|+|||++|++..++.++++++++ |+++.+|....  ...++...++. ++++
T Consensus       227 ~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~~~~~i  303 (363)
T 3m6i_A          227 VVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFG-GKVFVIGVGKN--EIQIPFMRASVREVDL  303 (363)
T ss_dssp             CEEEECCSCCHHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECCCCCS--CCCCCHHHHHHHTCEE
T ss_pred             cccccccccchHHHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEEccCCC--CccccHHHHHhcCcEE
Confidence            55432  11125788899999987 9999999999986689999999998 99999997433  34456555555 8999


Q ss_pred             EEeeccCCCchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcC-ce-eeEEEEeCc
Q 017457          308 CGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEG-KS-LRCIIWMDK  369 (371)
Q Consensus       308 ~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~-~kvvv~~~~  369 (371)
                      .|+...    .++++++++++++|++.+.++++++|+|+++++||+.+.++ .. .|++++.++
T Consensus       304 ~g~~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~  363 (363)
T 3m6i_A          304 QFQYRY----CNTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIKVQIQSLE  363 (363)
T ss_dssp             EECCSC----SSCHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHCGGGCCSEEEEECC-
T ss_pred             EEccCC----HHHHHHHHHHHHhCCCChHHceeeeeeHHHHHHHHHHHhccCCCeEEEEEecCC
Confidence            988543    46799999999999998888899999999999999999886 33 499998864

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=3.2e-55  Score=412.87  Aligned_cols=333  Identities=19%  Similarity=0.327  Sum_probs=285.0

Q ss_pred             CCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCC-CCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeecc
Q 017457            6 GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSST-DLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIF   84 (371)
Q Consensus         6 ~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~-~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~   84 (371)
                      ...++++++|.|+|+++||||||.+++||++|++++.|.. ......+|.++|||++|+|+++|++|++|++||+|++.+
T Consensus        16 ~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~V~~~~vGdrV~~~~   95 (356)
T 1pl8_A           16 PGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEP   95 (356)
T ss_dssp             TTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCSCCTTCEEEECS
T ss_pred             CCcEEEEEccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECCCCCCCCCCCEEEEec
Confidence            3458899999999999999999999999999999887532 111115789999999999999999999999999999999


Q ss_pred             CCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhc
Q 017457           85 HRDCGECRDCKSSKSNTCSKFGRGYRPNMP-RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL  163 (371)
Q Consensus        85 ~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~  163 (371)
                      ...|+.|++|+.+.+++|.....   .|.. .+                   |+|+||+++++++++++|+++++++|+.
T Consensus        96 ~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~~-------------------G~~aey~~v~~~~~~~iP~~l~~~~aa~  153 (356)
T 1pl8_A           96 GAPRENDEFCKMGRYNLSPSIFF---CATPPDD-------------------GNLCRFYKHNAAFCYKLPDNVTFEEGAL  153 (356)
T ss_dssp             EECSSCCHHHHTTCGGGCTTCEE---TTBTTBC-------------------CSCBSEEEEEGGGEEECCTTSCHHHHHH
T ss_pred             cCCCCCChHHHCcCcccCCCccc---cCcCCCC-------------------CccccEEEeehHHEEECcCCCCHHHHHh
Confidence            99999999999999999987653   3332 23                   4999999999999999999999999987


Q ss_pred             cccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccH
Q 017457          164 LSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTV  243 (371)
Q Consensus       164 ~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~  243 (371)
                      +. ++.|||+++ +..++++|++|||+|+|++|++++|+|+++|+++|++++++++++++++++|++++++++..++.++
T Consensus       154 ~~-~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~  231 (356)
T 1pl8_A          154 IE-PLSVGIHAC-RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEI  231 (356)
T ss_dssp             HH-HHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHH
T ss_pred             hc-hHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchH
Confidence            64 888999976 7889999999999999999999999999999978999999999999999999999998762001567


Q ss_pred             HHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhhHH
Q 017457          244 SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIA  322 (371)
Q Consensus       244 ~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~  322 (371)
                      .+.+++.+++++|+|||++|+...++.++++++++ |+++.+|...  ....++...++. ++++.|+...    .++++
T Consensus       232 ~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~~~~~i~g~~~~----~~~~~  304 (356)
T 1pl8_A          232 ARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGLGS--EMTTVPLLHAAIREVDIKGVFRY----CNTWP  304 (356)
T ss_dssp             HHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCC--SCCCCCHHHHHHTTCEEEECCSC----SSCHH
T ss_pred             HHHHHHHhCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEEecCC--CCCccCHHHHHhcceEEEEeccc----HHHHH
Confidence            77888887668999999999986689999999998 9999999632  234566655554 8899987533    35689


Q ss_pred             HHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEEeCc
Q 017457          323 TLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWMDK  369 (371)
Q Consensus       323 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~~~~  369 (371)
                      ++++++++|++.+.++++++|+++++++|++.+.++..+|+++.+++
T Consensus       305 ~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~gKvvi~~~~  351 (356)
T 1pl8_A          305 VAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKGLGLKIMLKCDP  351 (356)
T ss_dssp             HHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEECCT
T ss_pred             HHHHHHHcCCCChHHheEEEecHHHHHHHHHHHhCCCceEEEEeCCC
Confidence            99999999999888889999999999999999988844599998853

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=1.8e-54  Score=405.21  Aligned_cols=328  Identities=27%  Similarity=0.430  Sum_probs=285.8

Q ss_pred             cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457            4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI   83 (371)
Q Consensus         4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~   83 (371)
                      .++.++++++.|.|+|++|||+|||.+++||++|++.+.|.++.. ..+|.++|||++|+|+++|++|++|++||+|++.
T Consensus         8 ~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~~~p~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~   86 (339)
T 1rjw_A            8 QFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVK-PKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIP   86 (339)
T ss_dssp             STTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSC-CCSSBCCCSCEEEEEEEECTTCCSCCTTCEEEEC
T ss_pred             CCCCCcEEEEeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCCcC-CCCCeeccccceEEEEEECCCCCcCCCCCEEEEe
Confidence            445469999999999999999999999999999999999876532 2689999999999999999999999999999886


Q ss_pred             cCC-CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhh
Q 017457           84 FHR-DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC  162 (371)
Q Consensus        84 ~~~-~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa  162 (371)
                      +.. .||.|++|+.+.+++|.....   .|+..+|                   +|+||+++++++++++|+++|+++||
T Consensus        87 ~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~~P~~~~~~~aa  144 (339)
T 1rjw_A           87 WLYSACGHCDYCLSGQETLCEHQKN---AGYSVDG-------------------GYAEYCRAAADYVVKIPDNLSFEEAA  144 (339)
T ss_dssp             SEEECCSCSHHHHTTCGGGCTTCEE---BTTTBCC-------------------SSBSEEEEEGGGCEECCTTSCHHHHG
T ss_pred             cCCCCCCCCchhhCcCcccCCCcce---eecCCCC-------------------cceeeEEechHHEEECCCCCCHHHhh
Confidence            654 599999999999999987653   4544454                   99999999999999999999999999


Q ss_pred             ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457          163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT  242 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~  242 (371)
                      .+++++.|||+++.. .++++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.++++|+++++|+.+   .+
T Consensus       145 ~l~~~~~ta~~~l~~-~~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~d~~~---~~  219 (339)
T 1rjw_A          145 PIFCAGVTTYKALKV-TGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNPLK---ED  219 (339)
T ss_dssp             GGGTHHHHHHHHHHH-HTCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECTTT---SC
T ss_pred             hhhhhHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEecCCC---cc
Confidence            999999999998654 589999999999998899999999999999 9999999999999999999999999876   67


Q ss_pred             HHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhhH
Q 017457          243 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDI  321 (371)
Q Consensus       243 ~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~  321 (371)
                      +.+.+++.+ +++|++||++|....++.++++++++ |+++.+|....  ...++...++. ++++.|+....   .+++
T Consensus       220 ~~~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~~---~~~~  292 (339)
T 1rjw_A          220 AAKFMKEKV-GGVHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLPPE--EMPIPIFDTVLNGIKIIGSIVGT---RKDL  292 (339)
T ss_dssp             HHHHHHHHH-SSEEEEEESSCCHHHHHHHHHHEEEE-EEEEECCCCSS--EEEEEHHHHHHTTCEEEECCSCC---HHHH
T ss_pred             HHHHHHHHh-CCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCC--CCccCHHHHHhCCcEEEEeccCC---HHHH
Confidence            888888887 68999999999866689999999998 99999997432  35566665554 89999875433   5689


Q ss_pred             HHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCce-eeEEEEeCc
Q 017457          322 ATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS-LRCIIWMDK  369 (371)
Q Consensus       322 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvv~~~~  369 (371)
                      +++++++++|++.+.   +++|+++++++|++.+.+++. +|+++.+++
T Consensus       293 ~~~~~l~~~g~l~~~---~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  338 (339)
T 1rjw_A          293 QEALQFAAEGKVKTI---IEVQPLEKINEVFDRMLKGQINGRVVLTLED  338 (339)
T ss_dssp             HHHHHHHHTTSCCCC---EEEEEGGGHHHHHHHHHTTCCSSEEEEECCC
T ss_pred             HHHHHHHHcCCCCcc---EEEEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence            999999999987653   489999999999999988765 499998865

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.4e-54  Score=408.11  Aligned_cols=330  Identities=23%  Similarity=0.370  Sum_probs=283.6

Q ss_pred             CCCcEEEEEecCCCCCCeEEEEEeEeeccccccccccc-CCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeecc
Q 017457            6 GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKS-STDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIF   84 (371)
Q Consensus         6 ~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g-~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~   84 (371)
                      ...+++++.|.|+|+++||||||++++||++|++.+.+ .+......+|.++|||++|+|+++|++|++|++||+|++.+
T Consensus        13 ~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~   92 (352)
T 1e3j_A           13 QNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKKGDRVAVEP   92 (352)
T ss_dssp             TTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSCCTTCEEEECC
T ss_pred             CCcEEEEEecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEEEEEeCCCCCCCCCCCEEEEcC
Confidence            34588999999999999999999999999999998874 33221125789999999999999999999999999999999


Q ss_pred             CCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhc
Q 017457           85 HRDCGECRDCKSSKSNTCSKFGRGYRPNMP-RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL  163 (371)
Q Consensus        85 ~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~  163 (371)
                      ...|+.|++|+.+.+++|.....   .|.. .+                   |+|+||+++++++++++|+++|+++||.
T Consensus        93 ~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~~-------------------G~~aey~~v~~~~~~~iP~~~~~~~aa~  150 (352)
T 1e3j_A           93 GVPCRRCQFCKEGKYNLCPDLTF---CATPPDD-------------------GNLARYYVHAADFCHKLPDNVSLEEGAL  150 (352)
T ss_dssp             EECCSSSHHHHTTCGGGCTTCEE---TTBTTBC-------------------CSCBSEEEEEGGGEEECCTTSCHHHHHT
T ss_pred             cCCCCCChhhhCcCcccCCCCcc---cCcCCCC-------------------ccceeEEEeChHHeEECcCCCCHHHHHh
Confidence            99999999999999999987653   3332 23                   4999999999999999999999999987


Q ss_pred             cccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccH
Q 017457          164 LSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTV  243 (371)
Q Consensus       164 ~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~  243 (371)
                      +. ++.|||+++ +.+++++|++|||+|+|++|++++|+|+++|+ +|++++++++++++++++|+++++++++  ..++
T Consensus       151 ~~-~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~~~~~--~~~~  225 (352)
T 1e3j_A          151 LE-PLSVGVHAC-RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVVDP--AKEE  225 (352)
T ss_dssp             HH-HHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEECCT--TTSC
T ss_pred             hc-hHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCcc--cccH
Confidence            64 888999977 78899999999999999999999999999999 7999999999999999999999998762  1466


Q ss_pred             HHHHHHhhC---C-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCch
Q 017457          244 SQVIKEMTD---G-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPR  318 (371)
Q Consensus       244 ~~~i~~~~~---g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~  318 (371)
                      .+.+++.++   + ++|++||++|+...++.++++++++ |+++.+|...  ....++...+.. ++++.|+...    .
T Consensus       226 ~~~i~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~~~~~i~g~~~~----~  298 (352)
T 1e3j_A          226 ESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLMLVGMGS--QMVTVPLVNACAREIDIKSVFRY----C  298 (352)
T ss_dssp             HHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCS--SCCCCCHHHHHTTTCEEEECCSC----S
T ss_pred             HHHHHHHhccccCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCC--CCccccHHHHHhcCcEEEEeccc----h
Confidence            778888776   4 8999999999986689999999998 9999999633  234566555555 8899987532    3


Q ss_pred             hhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCc--eeeEEEEeCc
Q 017457          319 SDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGK--SLRCIIWMDK  369 (371)
Q Consensus       319 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~--~~kvvv~~~~  369 (371)
                      ++++++++++++|++.+.++++++|+|+++++|++.+.+++  ..|+++.+++
T Consensus       299 ~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~  351 (352)
T 1e3j_A          299 NDYPIALEMVASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMISCRQ  351 (352)
T ss_dssp             SCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHHCCTTCSEEEEECCC
T ss_pred             HHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCCCceEEEEecCC
Confidence            57999999999999888888899999999999999998876  4599998763

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=1.8e-54  Score=406.81  Aligned_cols=328  Identities=26%  Similarity=0.379  Sum_probs=290.0

Q ss_pred             CCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeecc
Q 017457            5 PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIF   84 (371)
Q Consensus         5 ~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~   84 (371)
                      ++..++++|+|.|+|++|||||||.|++||++|+++++|.++.   .+|.++|||++|+|+++|++|++|++||+|.+.+
T Consensus        10 ~~~~~~l~e~~~P~~~p~eVLVkv~a~gic~~D~~~~~G~~~~---~~p~i~GhE~aG~V~~vG~~V~~~~~GdrV~~~~   86 (348)
T 4eez_A           10 PDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFGN---KAGTVLGHEGIGIVKEIGADVSSLQVGDRVSVAW   86 (348)
T ss_dssp             CCSSEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTTTCC---CTTCBCCSEEEEEEEEECTTCCSCCTTCEEEEES
T ss_pred             CCCcEEEEEeECCCCCCCEEEEEEEEEEECHHHHHHhcCCCCC---CCCcccceeEEEEEEEECceeeecccCCeEeecc
Confidence            4456899999999999999999999999999999999998753   5899999999999999999999999999998766


Q ss_pred             C-CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhc
Q 017457           85 H-RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL  163 (371)
Q Consensus        85 ~-~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~  163 (371)
                      . ..|+.|.+|..+.++.|.....   .+...+|                   +|+||+.++++.++++|+++++++|++
T Consensus        87 ~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~G-------------------~~ae~~~~~~~~~~~iP~~~~~~~aa~  144 (348)
T 4eez_A           87 FFEGCGHCEYCVSGNETFCREVKN---AGYSVDG-------------------GMAEEAIVVADYAVKVPDGLDPIEASS  144 (348)
T ss_dssp             EEECCSSSHHHHTTCGGGCTTCEE---BTTTBCC-------------------SSBSEEEEEGGGSCBCCTTSCHHHHHH
T ss_pred             cccccCccccccCCcccccccccc---cccccCC-------------------cceeeccccccceeecCCCCCHHHHhh
Confidence            5 5689999999999999988775   5555665                   999999999999999999999999999


Q ss_pred             cccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccH
Q 017457          164 LSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTV  243 (371)
Q Consensus       164 ~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~  243 (371)
                      +++++.|||+++ +..++++|++|||+|+|++|.+++|+|+.++..+|++++++++|++.++++|+++++|+.+   .++
T Consensus       145 l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~---~~~  220 (348)
T 4eez_A          145 ITCAGVTTYKAI-KVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGD---VNP  220 (348)
T ss_dssp             HHHHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-C---CCH
T ss_pred             cccceeeEEeee-cccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCC---CCH
Confidence            999999999965 6788999999999999999999999999775449999999999999999999999999988   899


Q ss_pred             HHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhhH
Q 017457          244 SQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDI  321 (371)
Q Consensus       244 ~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~  321 (371)
                      .+.+++++++ ++|.+++++++..++..++++++++ |+++.+|...  ....++...++. ++++.|+..+.   ++++
T Consensus       221 ~~~v~~~t~g~g~d~~~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~i~gs~~~~---~~~~  294 (348)
T 4eez_A          221 VDEIKKITGGLGVQSAIVCAVARIAFEQAVASLKPM-GKMVAVAVPN--TEMTLSVPTVVFDGVEVAGSLVGT---RLDL  294 (348)
T ss_dssp             HHHHHHHTTSSCEEEEEECCSCHHHHHHHHHTEEEE-EEEEECCCCS--CEEEECHHHHHHSCCEEEECCSCC---HHHH
T ss_pred             HHHhhhhcCCCCceEEEEeccCcchhheeheeecCC-ceEEEEeccC--CCCccCHHHHHhCCeEEEEEecCC---HHHH
Confidence            9999999998 9999999999988899999999998 9999999643  345566666555 89999986544   5789


Q ss_pred             HHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEeCcC
Q 017457          322 ATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDKL  370 (371)
Q Consensus       322 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~~~~  370 (371)
                      +++++++++|++.+  + +++|+|+++++|++.+.+++.. |+||+|++|
T Consensus       295 ~~~~~l~~~g~i~p--~-~~~~~l~~~~~A~~~l~~g~~~GKvVl~~skL  341 (348)
T 4eez_A          295 AEAFQFGAEGKVKP--I-VATRKLEEINDIIDEMKAGKIEGRMVIDFTKL  341 (348)
T ss_dssp             HHHHHHHHTTSCCC--C-EEEECGGGHHHHHHHHHTTCCSSEEEEECC--
T ss_pred             HHHHHHHHcCCCEE--E-EEEEeHHHHHHHHHHHHCCCCccEEEEEcccc
Confidence            99999999998753  3 4899999999999999998765 999999987

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=1.1e-54  Score=408.03  Aligned_cols=332  Identities=21%  Similarity=0.294  Sum_probs=278.3

Q ss_pred             ccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEee
Q 017457            3 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP   82 (371)
Q Consensus         3 ~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~   82 (371)
                      .+++++++++++|.|+|+++||||||++++||++|++.+.|.++..  .+|.++|||++|+|+++|++|++|++||+|++
T Consensus        11 ~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~p~i~G~E~~G~V~~vG~~v~~~~vGdrV~~   88 (348)
T 3two_A           11 FSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEG--IYPMIPGHEIAGIIKEVGKGVKKFKIGDVVGV   88 (348)
T ss_dssp             CSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTSSSCC--CSSBCCCCCEEEEEEEECTTCCSCCTTCEEEE
T ss_pred             ccCCCCCeEEEeeCCCCCCCeEEEEEEEeeecccchhhhcCCCCCC--CCCeecCcceeEEEEEECCCCCCCCCCCEEEE
Confidence            4566779999999999999999999999999999999999987665  78999999999999999999999999999988


Q ss_pred             ccC-CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchh
Q 017457           83 IFH-RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA  161 (371)
Q Consensus        83 ~~~-~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~a  161 (371)
                      .+. ..||.|++|+.+++++|. ...   .++..+..     .+    ......|+|+||+++++++++++|+++++++|
T Consensus        89 ~~~~~~Cg~C~~C~~g~~~~c~-~~~---~~~~~~~~-----~~----~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~a  155 (348)
T 3two_A           89 GCFVNSCKACKPCKEHQEQFCT-KVV---FTYDCLDS-----FH----DNEPHMGGYSNNIVVDENYVISVDKNAPLEKV  155 (348)
T ss_dssp             CSEEECCSCSHHHHTTCGGGCT-TCE---ESSSSEEG-----GG----TTEECCCSSBSEEEEEGGGCEECCTTSCHHHH
T ss_pred             eCCcCCCCCChhHhCCCcccCc-ccc---cccccccc-----cc----cCCcCCccccceEEechhhEEECCCCCCHHHh
Confidence            654 789999999999999998 322   33332200     00    00111259999999999999999999999999


Q ss_pred             hccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCc
Q 017457          162 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK  241 (371)
Q Consensus       162 a~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~  241 (371)
                      |.+++++.|||+++ ...++++|++|||+|+|++|++++|+|+++|+ +|++++++++++++++++|+++++ .+.   .
T Consensus       156 a~l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v~-~~~---~  229 (348)
T 3two_A          156 APLLCAGITTYSPL-KFSKVTKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALSMGVKHFY-TDP---K  229 (348)
T ss_dssp             GGGGTHHHHHHHHH-HHTTCCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHHTTCSEEE-SSG---G
T ss_pred             hhhhhhHHHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCeec-CCH---H
Confidence            99999999999976 45699999999999999999999999999999 999999999999999999999988 322   1


Q ss_pred             cHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHh-c-CceEEEeeccCCCchh
Q 017457          242 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-K-GRSVCGTYFGGLKPRS  319 (371)
Q Consensus       242 ~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~-~~~~~g~~~~~~~~~~  319 (371)
                      .+        ..++|+|||++|+...++.++++++++ |+++.+|.........++...++ . ++++.|+....   .+
T Consensus       230 ~~--------~~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~  297 (348)
T 3two_A          230 QC--------KEELDFIISTIPTHYDLKDYLKLLTYN-GDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIGG---IK  297 (348)
T ss_dssp             GC--------CSCEEEEEECCCSCCCHHHHHTTEEEE-EEEEECCCCCGGGCCEEEHHHHHHTCSCEEEECCSCC---HH
T ss_pred             HH--------hcCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEECCCCCCCcccCCHHHHHhhCCeEEEEEecCC---HH
Confidence            11        118999999999985599999999998 99999997431222225555555 4 89999986544   56


Q ss_pred             hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEeCcC
Q 017457          320 DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDKL  370 (371)
Q Consensus       320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~~~~  370 (371)
                      +++++++++++|++.+.  + ++|+++++++||+.+.+++.. |+++++++.
T Consensus       298 ~~~~~~~l~~~g~l~~~--~-~~~~l~~~~~A~~~~~~~~~~gKvVi~~~~~  346 (348)
T 3two_A          298 ETQEMVDFSIKHNIYPE--I-DLILGKDIDTAYHNLTHGKAKFRYVIDMKKS  346 (348)
T ss_dssp             HHHHHHHHHHHTTCCCC--E-EEECGGGHHHHHHHHHTTCCCSEEEEEGGGC
T ss_pred             HHHHHHHHHHhCCCCce--E-EEEEHHHHHHHHHHHHcCCCceEEEEecCCc
Confidence            89999999999988763  4 899999999999999998764 999999875

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3e-54  Score=409.58  Aligned_cols=337  Identities=25%  Similarity=0.369  Sum_probs=285.2

Q ss_pred             cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCC------CcCCC
Q 017457            4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE------EVKER   77 (371)
Q Consensus         4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~------~~~~G   77 (371)
                      .++..++++++|.|+|+++||||||.+++||++|++.+.|.++..  .+|.++|||++|+|+++| +|+      +|++|
T Consensus        25 ~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~--~~P~v~GhE~~G~V~~vG-~V~~~~~~~~~~vG  101 (380)
T 1vj0_A           25 KFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRV--PLPIILGHEGAGRVVEVN-GEKRDLNGELLKPG  101 (380)
T ss_dssp             STTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTC--CSSBCCCCEEEEEEEEES-SCCBCTTSCBCCTT
T ss_pred             cCCCCeEEEEccCCCCCCCEEEEEEeEEeecccchHHhcCCCCCC--CCCcccCcCcEEEEEEeC-CccccccCCCCCCC
Confidence            344479999999999999999999999999999999999876533  689999999999999999 999      99999


Q ss_pred             CEEeeccCCCCCCCcccc-CCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeee-ecceeEECCCC
Q 017457           78 DLVLPIFHRDCGECRDCK-SSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVV-DITHVVKITPH  155 (371)
Q Consensus        78 d~V~~~~~~~~~~c~~~~-~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v-~~~~~~~~P~~  155 (371)
                      |+|++.+...||.|++|+ .+.+++|.....   .|.....        +   ..+...|+|+||+++ +++.++++|++
T Consensus       102 drV~~~~~~~cg~C~~C~~~g~~~~C~~~~~---~g~~~~~--------~---~~~~~~G~~aey~~v~~~~~~~~iP~~  167 (380)
T 1vj0_A          102 DLIVWNRGITCGECYWCKVSKEPYLCPNRKV---YGINRGC--------S---EYPHLRGCYSSHIVLDPETDVLKVSEK  167 (380)
T ss_dssp             CEEEECSEECCSSSHHHHTSCCGGGCTTCEE---TTTTCCS--------S---STTCCCSSSBSEEEECTTCCEEEECTT
T ss_pred             CEEEEcccCCCCCCHHHhcCCCcccCCCcce---ecccccc--------C---CCCCCCccccceEEEcccceEEECCCC
Confidence            999999999999999999 999999986543   3321000        0   000112599999999 99999999999


Q ss_pred             CCcc-hhhccccchhhhHHHHHHHcC-CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEE
Q 017457          156 IPLG-IACLLSCGVSTGVGAAWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI  233 (371)
Q Consensus       156 l~~~-~aa~~~~~~~ta~~~l~~~~~-~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~  233 (371)
                      ++++ +|+.++ ++.|||+++ +..+ +++|++|||+|+|++|++++|+|+++|+.+|++++++++++++++++|+++++
T Consensus       168 l~~~~~Aa~~~-~~~ta~~al-~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi  245 (380)
T 1vj0_A          168 DDLDVLAMAMC-SGATAYHAF-DEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTL  245 (380)
T ss_dssp             SCHHHHHHHTT-HHHHHHHHH-HTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEE
T ss_pred             CChHHhHhhhc-HHHHHHHHH-HhcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEEE
Confidence            9999 666666 999999987 6678 99999999999999999999999999944999999999999999999999999


Q ss_pred             cCC---CCCCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHH-Hhc-CceE
Q 017457          234 NPA---TCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILK-GRSV  307 (371)
Q Consensus       234 ~~~---~~~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~-~~~~  307 (371)
                      ++.   +   .++.+.+++++++ ++|+|||++|++..++.++++++++ |+++.+|.........++... ++. ++++
T Consensus       246 ~~~~~~~---~~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i  321 (380)
T 1vj0_A          246 NRRETSV---EERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGVAVPQDPVPFKVYEWLVLKNATF  321 (380)
T ss_dssp             ETTTSCH---HHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCSCCCCEEECHHHHTTTTTCEE
T ss_pred             eccccCc---chHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCCCCeeEchHHHHHhCCeEE
Confidence            987   5   6788889999988 9999999999866589999999998 999999975412245677666 555 8999


Q ss_pred             EEeeccCCCchhhHHHHHHHHHc--CCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEEeC
Q 017457          308 CGTYFGGLKPRSDIATLAQKYLD--KELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWMD  368 (371)
Q Consensus       308 ~g~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~~~  368 (371)
                      .|+....   .++++++++++++  |++  .++++++|+|+++++|++.+.+++..|+++.++
T Consensus       322 ~g~~~~~---~~~~~~~~~l~~~~~g~l--~~~i~~~~~l~~~~~A~~~~~~~~~~Kvvl~~~  379 (380)
T 1vj0_A          322 KGIWVSD---TSHFVKTVSITSRNYQLL--SKLITHRLPLKEANKALELMESREALKVILYPE  379 (380)
T ss_dssp             EECCCCC---HHHHHHHHHHHHTCHHHH--GGGCCEEEEGGGHHHHHHHHHHTSCSCEEEECC
T ss_pred             EEeecCC---HHHHHHHHHHHHhhcCCe--eeEEEEEEeHHHHHHHHHHHhcCCCceEEEEeC
Confidence            9986443   5789999999999  976  556789999999999999998765449999864

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=9e-54  Score=401.11  Aligned_cols=324  Identities=21%  Similarity=0.351  Sum_probs=283.9

Q ss_pred             cEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCCC
Q 017457            9 LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDC   88 (371)
Q Consensus         9 l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~   88 (371)
                      ++++++|.|+|++|||||||++++||++|++++.|.++.. ..+|.++|||++|+|+++|++|++|++||+|++.+...|
T Consensus        15 l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~c   93 (343)
T 2eih_A           15 LEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPK-LPLPHVLGADGSGVVDAVGPGVEGFAPGDEVVINPGLSC   93 (343)
T ss_dssp             EEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSSTT-CCSSEECCSEEEEEEEEECSSCCSCCTTCEEEECCEECC
T ss_pred             EEEEecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCCCC-CCCCcccccceEEEEEEECCCCCCCCCCCEEEECCCCCc
Confidence            8899999999999999999999999999999999876532 268999999999999999999999999999999999999


Q ss_pred             CCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccch
Q 017457           89 GECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGV  168 (371)
Q Consensus        89 ~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~~  168 (371)
                      +.|++|+.+.+++|.....   .|+..+|                   +|+||++++++.++++|+++++++||++++++
T Consensus        94 g~c~~C~~g~~~~C~~~~~---~G~~~~G-------------------~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~  151 (343)
T 2eih_A           94 GRCERCLAGEDNLCPRYQI---LGEHRHG-------------------TYAEYVVLPEANLAPKPKNLSFEEAAAIPLTF  151 (343)
T ss_dssp             SCSHHHHTTCGGGCTTCEE---TTTSSCC-------------------SSBSEEEEEGGGEEECCTTSCHHHHHHSHHHH
T ss_pred             ccchhhccCcccccccccc---cCcCCCc-------------------cceeEEEeChHHeEECCCCCCHHHHhhchhhH
Confidence            9999999999999987664   4554444                   99999999999999999999999999999999


Q ss_pred             hhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHH
Q 017457          169 STGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVI  247 (371)
Q Consensus       169 ~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i  247 (371)
                      .|||+++.+.+++++|++|||+|+ |++|++++|+|+++|+ +|+++++++++++.++++|+++++|+.+   .++.+.+
T Consensus       152 ~ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~ga~~~~d~~~---~~~~~~~  227 (343)
T 2eih_A          152 LTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGADETVNYTH---PDWPKEV  227 (343)
T ss_dssp             HHHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEETTS---TTHHHHH
T ss_pred             HHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEcCCc---ccHHHHH
Confidence            999998766678999999999998 9999999999999999 9999999999999999999999998876   6788888


Q ss_pred             HHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhhHHHHH
Q 017457          248 KEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATLA  325 (371)
Q Consensus       248 ~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~  325 (371)
                      .+.+++ ++|++||++|... ++.++++++++ |+++.+|..... ...++...++. ++++.|+...   ..+++++++
T Consensus       228 ~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~  301 (343)
T 2eih_A          228 RRLTGGKGADKVVDHTGALY-FEGVIKATANG-GRIAIAGASSGY-EGTLPFAHVFYRQLSILGSTMA---SKSRLFPIL  301 (343)
T ss_dssp             HHHTTTTCEEEEEESSCSSS-HHHHHHHEEEE-EEEEESSCCCSC-CCCCCTTHHHHTTCEEEECCSC---CGGGHHHHH
T ss_pred             HHHhCCCCceEEEECCCHHH-HHHHHHhhccC-CEEEEEecCCCC-cCccCHHHHHhCCcEEEEecCc---cHHHHHHHH
Confidence            888876 8999999999544 89999999998 999999974332 22355445444 8999987532   256799999


Q ss_pred             HHHHcCCCCCCCceeEEEecccHHHHHHHHhcCce-eeEEEEe
Q 017457          326 QKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS-LRCIIWM  367 (371)
Q Consensus       326 ~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvv~~  367 (371)
                      +++++|++.  +.++++|+|+++++||+.+.+++. +|+++.+
T Consensus       302 ~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  342 (343)
T 2eih_A          302 RFVEEGKLK--PVVGQVLPLEAAAEGHRLLEERRVFGKVVLQV  342 (343)
T ss_dssp             HHHHHTSSC--CCEEEEEEGGGHHHHHHHHHTTCSSSEEEEEC
T ss_pred             HHHHcCCCC--CceeEEeeHHHHHHHHHHHHcCCCceEEEEec
Confidence            999999765  457899999999999999988765 4999875

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=6e-54  Score=410.68  Aligned_cols=328  Identities=22%  Similarity=0.306  Sum_probs=285.9

Q ss_pred             CcEEEEEecCC-CCCCeEEEEEeEeecccccccccccCCC-----CCCCCCCccccccccEEEEEeCCCC------CCcC
Q 017457            8 PLVIEEIEVEP-PKAWEIRIKILCTSLCHSDVTFWKSSTD-----LPKLPLPVIFGHEAVGVVESVGEYV------EEVK   75 (371)
Q Consensus         8 ~l~~~~~~~~~-~~~~eVlVkv~~~~i~~~D~~~~~g~~~-----~~~~~~p~~~G~e~~G~Vv~vG~~v------~~~~   75 (371)
                      .++++++|.|+ |++|||||||.+++||++|++++.|...     .....+|.++|||++|+|+++|++|      ++|+
T Consensus        41 ~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~P~i~G~E~~G~V~~vG~~v~~~~~~~~~~  120 (404)
T 3ip1_A           41 EVRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTNKRFE  120 (404)
T ss_dssp             EEEEEEECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTSBBSCCSCBCSSEECCCEEEEEEEEECTTCEETTTTEECC
T ss_pred             ceEEEEcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCccccccccCCCCcccCccceEEEEEECCCccccccCCCCC
Confidence            58899999999 9999999999999999999999886421     1112689999999999999999999      8999


Q ss_pred             CCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCC
Q 017457           76 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH  155 (371)
Q Consensus        76 ~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~  155 (371)
                      +||+|++.+...|+.|++|+.+.+++|.....   .|+..+|                   +|+||++++++.++++|++
T Consensus       121 vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~iP~~  178 (404)
T 3ip1_A          121 IGEPVCAEEMLWCGHCRPCAEGFPNHCENLNE---LGFNVDG-------------------AFAEYVKVDAKYAWSLREL  178 (404)
T ss_dssp             TTCEEEECSEECCSCSHHHHTTCGGGCTTCEE---BTTTBCC-------------------SSBSEEEEEGGGEEECGGG
T ss_pred             CCCEEEECCccCCCCCHHHHCcCcccCccccc---cCCCCCC-------------------CCcceEEechHHeEecccc
Confidence            99999999999999999999999999998764   6666665                   9999999999999999998


Q ss_pred             CC------cchhhccccchhhhHHHHHHH-cCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhC
Q 017457          156 IP------LGIACLLSCGVSTGVGAAWKV-AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG  228 (371)
Q Consensus       156 l~------~~~aa~~~~~~~ta~~~l~~~-~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lg  228 (371)
                      ++      +.++|+++.+++|||+++... +++++|++|||+|+|++|++++|+|+++|+++|++++++++++++++++|
T Consensus       179 ~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lG  258 (404)
T 3ip1_A          179 EGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELG  258 (404)
T ss_dssp             BTTBCTHHHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHT
T ss_pred             ccccccccchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcC
Confidence            86      455888888999999987655 48999999999999999999999999999988999999999999999999


Q ss_pred             cceEEcCCCCCCccHHHHHHHhhCC-CcCEEEECCCCh-HHHHHHHHHh----hcCCceEEEECccCCCCceecCHHHHh
Q 017457          229 ITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLT-SVMNDAFNSS----REGWGKTVILGVEMHGSPISLNSIEIL  302 (371)
Q Consensus       229 a~~v~~~~~~~~~~~~~~i~~~~~g-g~d~vid~~g~~-~~~~~~~~~l----~~~~G~~v~~g~~~~~~~~~~~~~~~~  302 (371)
                      +++++++++   .++.+.+++++++ ++|+|||++|++ ..+..+++++    +++ |+++.+|....  ...++...++
T Consensus       259 a~~vi~~~~---~~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~-G~iv~~G~~~~--~~~~~~~~~~  332 (404)
T 3ip1_A          259 ADHVIDPTK---ENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGIN-ATVAIVARADA--KIPLTGEVFQ  332 (404)
T ss_dssp             CSEEECTTT---SCHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCC-CEEEECSCCCS--CEEECHHHHH
T ss_pred             CCEEEcCCC---CCHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCC-cEEEEeCCCCC--CCcccHHHHh
Confidence            999999988   7899999999988 999999999998 3467777888    998 99999997543  3567777666


Q ss_pred             c-CceEEEeeccCCCchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEEeCc
Q 017457          303 K-GRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWMDK  369 (371)
Q Consensus       303 ~-~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~~~~  369 (371)
                      . ++++.|+....  ..++++++++++++| +.+.++++++|+|+++++||+.+..   +|+++++++
T Consensus       333 ~~~~~i~g~~~~~--~~~~~~~~~~ll~~g-l~~~~~i~~~~~l~~~~~A~~~~~~---GKvvl~~~~  394 (404)
T 3ip1_A          333 VRRAQIVGSQGHS--GHGTFPRVISLMASG-MDMTKIISKTVSMEEIPEYIKRLQT---DKSLVKVTM  394 (404)
T ss_dssp             HTTCEEEECCCCC--STTHHHHHHHHHHTT-CCGGGGCCEEECGGGHHHHHHHTTT---CTTCSCEEE
T ss_pred             ccceEEEEecCCC--chHHHHHHHHHHHcC-CChhheEEEEeeHHHHHHHHHHHhC---CcEEEecCC
Confidence            5 89999985332  246799999999999 9888889999999999999999883   377776643

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.3e-53  Score=396.50  Aligned_cols=331  Identities=24%  Similarity=0.377  Sum_probs=285.2

Q ss_pred             cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457            4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI   83 (371)
Q Consensus         4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~   83 (371)
                      .++.+++++++|.|+|+++||||||.+++||++|++++.|.++.. ..+|.++|||++|+|+++|++|++|++||+|++.
T Consensus        13 ~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~~~p~v~G~E~~G~V~~vG~~v~~~~~GdrV~~~   91 (347)
T 2hcy_A           13 ESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLP-VKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIK   91 (347)
T ss_dssp             STTCCCEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSC-CCSSEECCCEEEEEEEEECTTCCSCCTTCEEEEC
T ss_pred             CCCCCCEEEEeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCCCC-CCCCcccCccceEEEEEECCCCCCCcCCCEEEEe
Confidence            445469999999999999999999999999999999999876532 2689999999999999999999999999999886


Q ss_pred             cCC-CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhh
Q 017457           84 FHR-DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC  162 (371)
Q Consensus        84 ~~~-~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa  162 (371)
                      +.. .||.|++|+.+.+++|.....   .|+..+|                   +|+||++++++.++++|+++++++||
T Consensus        92 ~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~iP~~~~~~~aa  149 (347)
T 2hcy_A           92 WLNGSCMACEYCELGNESNCPHADL---SGYTHDG-------------------SFQQYATADAVQAAHIPQGTDLAQVA  149 (347)
T ss_dssp             SEEECCSSSTTTTTTCGGGCTTCEE---BTTTBCC-------------------SSBSEEEEETTTSEEECTTCCHHHHG
T ss_pred             cCCCCCCCChhhhCCCcccCccccc---cccCCCC-------------------cceeEEEeccccEEECCCCCCHHHHH
Confidence            654 599999999999999987653   4544454                   99999999999999999999999999


Q ss_pred             ccccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCc
Q 017457          163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK  241 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~  241 (371)
                      .+++++.|||+++. ..++++|++|||+|+ |++|++++|+++.+|+ +|+++++++++.+.++++|+++++|..+  .+
T Consensus       150 ~l~~~~~ta~~~l~-~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~~~~~~~g~~~~~d~~~--~~  225 (347)
T 2hcy_A          150 PILCAGITVYKALK-SANLMAGHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRSIGGEVFIDFTK--EK  225 (347)
T ss_dssp             GGGTHHHHHHHHHH-TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHHHHHHHTTCCEEEETTT--CS
T ss_pred             HHhhhHHHHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHHHHHHHcCCceEEecCc--cH
Confidence            99999999999764 458999999999998 9999999999999999 9999999999999999999999888662  16


Q ss_pred             cHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhh
Q 017457          242 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSD  320 (371)
Q Consensus       242 ~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~  320 (371)
                      ++.+.+++.+.+++|++||++|....++.++++++++ |+++.+|... .....++...++. ++++.|+....   .++
T Consensus       226 ~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~~l~~~-G~iv~~g~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~  300 (347)
T 2hcy_A          226 DIVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRAN-GTTVLVGMPA-GAKCCSDVFNQVVKSISIVGSYVGN---RAD  300 (347)
T ss_dssp             CHHHHHHHHHTSCEEEEEECSSCHHHHHHHTTSEEEE-EEEEECCCCT-TCEEEEEHHHHHHTTCEEEECCCCC---HHH
T ss_pred             hHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEEeCCC-CCCCCCCHHHHhhCCcEEEEccCCC---HHH
Confidence            7888888887668999999999866689999999998 9999999743 2345666666555 89999875433   568


Q ss_pred             HHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCce-eeEEEEeCc
Q 017457          321 IATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS-LRCIIWMDK  369 (371)
Q Consensus       321 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvv~~~~  369 (371)
                      ++++++++++|++.+.   +++|+++++++||+.+.+++. +|+++.+++
T Consensus       301 ~~~~~~l~~~g~l~~~---~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~  347 (347)
T 2hcy_A          301 TREALDFFARGLVKSP---IKVVGLSTLPEIYEKMEKGQIVGRYVVDTSK  347 (347)
T ss_dssp             HHHHHHHHHTTSCCCC---EEEEEGGGHHHHHHHHHTTCCSSEEEEESCC
T ss_pred             HHHHHHHHHhCCCccc---eEEEcHHHHHHHHHHHHcCCcceeEEEecCC
Confidence            9999999999987653   479999999999999988765 599998864

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=5.2e-53  Score=396.56  Aligned_cols=328  Identities=26%  Similarity=0.351  Sum_probs=285.0

Q ss_pred             cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCC------CCCCCCccccccccEEEEEeCCCCCCcCCC
Q 017457            4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL------PKLPLPVIFGHEAVGVVESVGEYVEEVKER   77 (371)
Q Consensus         4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~------~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~G   77 (371)
                      .++.+++++++|.|+|+++||||||.+++||++|++++.|.++.      ....+|.++|||++|+|+++|++|++|++|
T Consensus         8 ~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~vG   87 (347)
T 1jvb_A            8 EIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSKG   87 (347)
T ss_dssp             STTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTTCCSCCTT
T ss_pred             cCCCCeEEEEeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEEECCCCCCCCCC
Confidence            34456999999999999999999999999999999999886542      012689999999999999999999999999


Q ss_pred             CEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeec-ceeEECCCCC
Q 017457           78 DLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI-THVVKITPHI  156 (371)
Q Consensus        78 d~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~-~~~~~~P~~l  156 (371)
                      |+|+..+...|+.|++|+.+++++|.....   .|+..+|                   +|+||+++++ +.++++ +++
T Consensus        88 drV~~~~~~~Cg~C~~C~~g~~~~C~~~~~---~G~~~~G-------------------~~aey~~v~~~~~~~~i-~~~  144 (347)
T 1jvb_A           88 DLVAVNPWQGEGNCYYCRIGEEHLCDSPRW---LGINFDG-------------------AYAEYVIVPHYKYMYKL-RRL  144 (347)
T ss_dssp             CEEEECCEECCSSSHHHHTTCGGGCSSCEE---BTTTBCC-------------------SSBSEEEESCGGGEEEC-SSS
T ss_pred             CEEEeCCCCCCCCChhhhCcCcccCccccc---ccccCCC-------------------cceeEEEecCccceEEe-CCC
Confidence            999988888999999999999999987653   4554444                   9999999999 999999 999


Q ss_pred             CcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHHhCcceEEc
Q 017457          157 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKFGITDFIN  234 (371)
Q Consensus       157 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~lga~~v~~  234 (371)
                      ++++|+.+++++.|||+++ ...++++|++|||+|+ |++|++++|+++.+ |+ +|+++++++++++.++++|++++++
T Consensus       145 ~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~~g~~~~~~  222 (347)
T 1jvb_A          145 NAVEAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKRAGADYVIN  222 (347)
T ss_dssp             CHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CHHHcccchhhHHHHHHHH-HhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHHhCCCEEec
Confidence            9999999999999999976 4588999999999998 59999999999999 99 8999999999999999999999998


Q ss_pred             CCCCCCccHHHHHHHhhC-CCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeec
Q 017457          235 PATCGDKTVSQVIKEMTD-GGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYF  312 (371)
Q Consensus       235 ~~~~~~~~~~~~i~~~~~-gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~  312 (371)
                      +.+   .++.+.+.+++. +++|++||++|+...++.++++++++ |+++.+|..... . .++...++. ++++.|+..
T Consensus       223 ~~~---~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~~-~-~~~~~~~~~~~~~i~g~~~  296 (347)
T 1jvb_A          223 ASM---QDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGLFGAD-L-HYHAPLITLSEIQFVGSLV  296 (347)
T ss_dssp             TTT---SCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEE-EEEEECCSSCCC-C-CCCHHHHHHHTCEEEECCS
T ss_pred             CCC---ccHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHHHhcC-CEEEEECCCCCC-C-CCCHHHHHhCceEEEEEec
Confidence            877   678888888886 58999999999986689999999998 999999974312 2 566655554 899999754


Q ss_pred             cCCCchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCce-eeEEEEe
Q 017457          313 GGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS-LRCIIWM  367 (371)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvv~~  367 (371)
                      ..   .++++++++++++|++.  ++++++|+|+++++|++.+.+++. +|+++.+
T Consensus       297 ~~---~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  347 (347)
T 1jvb_A          297 GN---QSDFLGIMRLAEAGKVK--PMITKTMKLEEANEAIDNLENFKAIGRQVLIP  347 (347)
T ss_dssp             CC---HHHHHHHHHHHHTTSSC--CCCEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             cC---HHHHHHHHHHHHcCCCC--ceEEEEEcHHHHHHHHHHHHCCCCcceEEecC
Confidence            33   57899999999999764  457899999999999999988775 4999864

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=4.1e-53  Score=396.77  Aligned_cols=324  Identities=24%  Similarity=0.411  Sum_probs=259.1

Q ss_pred             cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457            4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI   83 (371)
Q Consensus         4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~   83 (371)
                      .++.+++++++|.|+|+++||||||++++||++|++.+.|.++.....+|.++|||++|+|+++|++ ++|++||+|+..
T Consensus        11 ~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~E~~G~V~~vG~~-~~~~~GdrV~~~   89 (344)
T 2h6e_A           11 KFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVGEL-AKVKKGDNVVVY   89 (344)
T ss_dssp             SCCC-----EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCCCTTCCSSEECCCCEEEEEEEECTT-CCCCTTCEEEEC
T ss_pred             cCCCCCeEEEeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCcccCCCCCccccccceEEEEEECCC-CCCCCCCEEEEC
Confidence            3444689999999999999999999999999999999998765211268999999999999999999 999999999988


Q ss_pred             cCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeee-cceeEECCCCCCcchhh
Q 017457           84 FHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVD-ITHVVKITPHIPLGIAC  162 (371)
Q Consensus        84 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~-~~~~~~~P~~l~~~~aa  162 (371)
                      +...||.|++|+.+.+++|.....   .|...+|                   +|+||++++ +++++++ +++|+++||
T Consensus        90 ~~~~Cg~C~~C~~g~~~~C~~~~~---~G~~~~G-------------------~~aey~~v~~~~~~~~i-~~l~~~~aa  146 (344)
T 2h6e_A           90 ATWGDLTCRYCREGKFNICKNQII---PGQTTNG-------------------GFSEYMLVKSSRWLVKL-NSLSPVEAA  146 (344)
T ss_dssp             SCBCCSCSTTGGGTCGGGCTTCBC---BTTTBCC-------------------SSBSEEEESCGGGEEEE-SSSCHHHHG
T ss_pred             CCCCCCCChhhhCCCcccCCCccc---cccccCC-------------------cceeeEEecCcccEEEe-CCCCHHHhh
Confidence            889999999999999999987643   4544444                   999999999 9999999 999999999


Q ss_pred             ccccchhhhHHHHHHH----cCCCCCCeEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCChhHHHHHHHhCcceEEcCC
Q 017457          163 LLSCGVSTGVGAAWKV----AGVEVGSTVAIFGLGAVGLAVAEGARLN--RASKIIGVDINPEKFEIGKKFGITDFINPA  236 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~----~~~~~g~~VLI~G~g~~G~~ai~la~~~--g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~  236 (371)
                      .+++++.|||+++...    .++ +|++|||+|+|++|++++|+|+++  |+ +|+++++++++++.++++|+++++|++
T Consensus       147 ~l~~~~~ta~~al~~~~~~~~~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~  224 (344)
T 2h6e_A          147 PLADAGTTSMGAIRQALPFISKF-AEPVVIVNGIGGLAVYTIQILKALMKNI-TIVGISRSKKHRDFALELGADYVSEMK  224 (344)
T ss_dssp             GGGTHHHHHHHHHHHHHHHHTTC-SSCEEEEECCSHHHHHHHHHHHHHCTTC-EEEEECSCHHHHHHHHHHTCSEEECHH
T ss_pred             hhhhhhHHHHHHHHhhhhcccCC-CCCEEEEECCCHHHHHHHHHHHHhcCCC-EEEEEeCCHHHHHHHHHhCCCEEeccc
Confidence            9999999999987554    288 999999999999999999999999  99 899999999999999999999998754


Q ss_pred             CCCCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccC
Q 017457          237 TCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGG  314 (371)
Q Consensus       237 ~~~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~  314 (371)
                      +   .  .+.+.+++++ ++|+|||++|+...++.++++++++ |+++.+|....  ...++...++. ++++.|+....
T Consensus       225 ~---~--~~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~~  296 (344)
T 2h6e_A          225 D---A--ESLINKLTDGLGASIAIDLVGTEETTYNLGKLLAQE-GAIILVGMEGK--RVSLEAFDTAVWNKKLLGSNYGS  296 (344)
T ss_dssp             H---H--HHHHHHHHTTCCEEEEEESSCCHHHHHHHHHHEEEE-EEEEECCCCSS--CCCCCHHHHHHTTCEEEECCSCC
T ss_pred             c---c--hHHHHHhhcCCCccEEEECCCChHHHHHHHHHhhcC-CEEEEeCCCCC--CcccCHHHHhhCCcEEEEEecCC
Confidence            2   0  2334566666 8999999999986699999999998 99999997432  34566665544 89999975432


Q ss_pred             CCchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCce-eeEEEEe
Q 017457          315 LKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS-LRCIIWM  367 (371)
Q Consensus       315 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvv~~  367 (371)
                         .++++++++++++|++.+  .+ ++|+|+++++|++.+.+++. +|+++.+
T Consensus       297 ---~~~~~~~~~l~~~g~i~~--~i-~~~~l~~~~~A~~~~~~~~~~gKvvl~~  344 (344)
T 2h6e_A          297 ---LNDLEDVVRLSESGKIKP--YI-IKVPLDDINKAFTNLDEGRVDGRQVITP  344 (344)
T ss_dssp             ---HHHHHHHHHHHHTTSSCC--CE-EEECC----------------CEEEECC
T ss_pred             ---HHHHHHHHHHHHcCCCCc--ce-EEEeHHHHHHHHHHHHcCCCceEEEEeC
Confidence               578999999999997764  46 99999999999999988775 4998863

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=1.5e-52  Score=395.53  Aligned_cols=323  Identities=21%  Similarity=0.234  Sum_probs=279.3

Q ss_pred             CCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccC
Q 017457            6 GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH   85 (371)
Q Consensus         6 ~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~   85 (371)
                      .++++++++|.|+|++|||||||++++||++|++++.|.++... .+|.++|||++|+|+++|++|++|++||+|++.+.
T Consensus        38 ~~~l~~~e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~-~~P~v~GhE~~G~V~~vG~~v~~~~vGDrV~~~~~  116 (363)
T 3uog_A           38 PHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGLDL-AFPFVPASDMSGVVEAVGKSVTRFRPGDRVISTFA  116 (363)
T ss_dssp             TTCCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCTTCCC-CSSBCCCCEEEEEEEEECTTCCSCCTTCEEEECSS
T ss_pred             CCCcEEEeeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCC-CCCcCcccceEEEEEEECCCCCCCCCCCEEEEecc
Confidence            35799999999999999999999999999999999999775322 78999999999999999999999999999998765


Q ss_pred             CCCCCCccccCCCCCCCCCCCCCCC-CCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcc
Q 017457           86 RDCGECRDCKSSKSNTCSKFGRGYR-PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLL  164 (371)
Q Consensus        86 ~~~~~c~~~~~~~~~~~~~~~~~~~-~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~  164 (371)
                      .      +|..+. +.|........ .|...+|                   +|+||+++++++++++|+++++++||++
T Consensus       117 ~------~c~~g~-~~c~~~~~~~~~~g~~~~G-------------------~~aey~~v~~~~~~~iP~~~~~~~aa~l  170 (363)
T 3uog_A          117 P------GWLDGL-RPGTGRTPAYETLGGAHPG-------------------VLSEYVVLPEGWFVAAPKSLDAAEASTL  170 (363)
T ss_dssp             T------TCCSSS-CCSCSSCCCCCCTTTTSCC-------------------CCBSEEEEEGGGEEECCTTSCHHHHHTT
T ss_pred             c------cccccc-cccccccccccccCcCCCC-------------------cceeEEEechHHeEECCCCCCHHHHhhc
Confidence            4      566677 88863221111 3334444                   9999999999999999999999999999


Q ss_pred             ccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHH
Q 017457          165 SCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVS  244 (371)
Q Consensus       165 ~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~  244 (371)
                      ++++.|||+++.+.+++++|++|||+|+|++|++++|+|+++|+ +|++++++++++++++++|+++++|...   +++.
T Consensus       171 ~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~---~~~~  246 (363)
T 3uog_A          171 PCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFALGADHGINRLE---EDWV  246 (363)
T ss_dssp             TTHHHHHHHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTCSEEEETTT---SCHH
T ss_pred             ccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhHHHHHHcCCCEEEcCCc---ccHH
Confidence            99999999988788999999999999999999999999999999 9999999999999999999999999654   6899


Q ss_pred             HHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhhHH
Q 017457          245 QVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIA  322 (371)
Q Consensus       245 ~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~  322 (371)
                      +.+++++++ ++|+|||++|... ++.++++++++ |+++.+|.... ....++...++. ++++.|+....   .++++
T Consensus       247 ~~v~~~~~g~g~D~vid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~  320 (363)
T 3uog_A          247 ERVYALTGDRGADHILEIAGGAG-LGQSLKAVAPD-GRISVIGVLEG-FEVSGPVGPLLLKSPVVQGISVGH---RRALE  320 (363)
T ss_dssp             HHHHHHHTTCCEEEEEEETTSSC-HHHHHHHEEEE-EEEEEECCCSS-CEECCBTTHHHHTCCEEEECCCCC---HHHHH
T ss_pred             HHHHHHhCCCCceEEEECCChHH-HHHHHHHhhcC-CEEEEEecCCC-cccCcCHHHHHhCCcEEEEEecCC---HHHHH
Confidence            999999988 9999999999766 99999999998 99999997443 335555555554 89999986543   57899


Q ss_pred             HHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEEe
Q 017457          323 TLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM  367 (371)
Q Consensus       323 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~~  367 (371)
                      ++++++++|++  .++++++|+++++++||+.+.+++.+|+++++
T Consensus       321 ~~~~l~~~g~l--~~~i~~~~~l~~~~~A~~~~~~~~~gKvvi~~  363 (363)
T 3uog_A          321 DLVGAVDRLGL--KPVIDMRYKFTEVPEALAHLDRGPFGKVVIEF  363 (363)
T ss_dssp             HHHHHHHHHTC--CCCEEEEEEGGGHHHHHHTGGGCCSBEEEEEC
T ss_pred             HHHHHHHcCCC--ccceeeEEcHHHHHHHHHHHHcCCCccEEEeC
Confidence            99999999965  45688999999999999999988855999875

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=3.4e-54  Score=406.06  Aligned_cols=323  Identities=16%  Similarity=0.209  Sum_probs=277.8

Q ss_pred             CCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCC---CccccccccEEEEEeCCCCCCcCCCCEEe
Q 017457            5 PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPL---PVIFGHEAVGVVESVGEYVEEVKERDLVL   81 (371)
Q Consensus         5 ~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~---p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~   81 (371)
                      ++.+++++++|.|+|++|||||||++++||++|++++.|.++..  .+   |.++|||++| |+++|++ ++|++||+|+
T Consensus         9 ~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~~~~p~v~G~E~~G-V~~vG~~-~~~~vGdrV~   84 (357)
T 2b5w_A            9 GEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGF--PEGEDHLVLGHEAVG-VVVDPND-TELEEGDIVV   84 (357)
T ss_dssp             TCSSCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCSTTS--CTTCSEEECCSEEEE-EEEECTT-SSCCTTCEEE
T ss_pred             CCCceEEEECCCCCCCcCEEEEEEeEEeechhcHHHHcCCCCCC--CCCCCCcccCceeEE-EEEECCC-CCCCCCCEEE
Confidence            34459999999999999999999999999999999999876543  56   8999999999 9999999 9999999999


Q ss_pred             eccCCC--CCCCccccCCCCCCCCCCCCCCCC--CC-CCCCCccccccCCceeecccCcccccceeeeecceeEECCCCC
Q 017457           82 PIFHRD--CGECRDCKSSKSNTCSKFGRGYRP--NM-PRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI  156 (371)
Q Consensus        82 ~~~~~~--~~~c~~~~~~~~~~~~~~~~~~~~--g~-~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l  156 (371)
                      +.+...  |+.|++|+.+.+++|.....   .  |+ ..+                   |+|+||++++++.++++|+++
T Consensus        85 ~~~~~~~~cg~C~~C~~g~~~~C~~~~~---~~~g~~~~~-------------------G~~aey~~v~~~~~~~iP~~~  142 (357)
T 2b5w_A           85 PTVRRPPASGTNEYFERDQPDMAPDGMY---FERGIVGAH-------------------GYMSEFFTSPEKYLVRIPRSQ  142 (357)
T ss_dssp             ECSEECCTTCCCHHHHTTCGGGCCTTSC---EEETTBEEC-------------------CSCBSEEEEEGGGEEECCGGG
T ss_pred             ECCcCCCCCCCChHHhCcCcccCCCCcc---cccCccCCC-------------------cceeeEEEEchHHeEECCCCc
Confidence            988888  99999999999999987553   2  32 223                   499999999999999999999


Q ss_pred             CcchhhccccchhhhHHHHHHHcCCCCC------CeEEEEcCChHHHHH-HHHH-HHcCCCeEEEEcCChh---HHHHHH
Q 017457          157 PLGIACLLSCGVSTGVGAAWKVAGVEVG------STVAIFGLGAVGLAV-AEGA-RLNRASKIIGVDINPE---KFEIGK  225 (371)
Q Consensus       157 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g------~~VLI~G~g~~G~~a-i~la-~~~g~~~Vi~~~~~~~---~~~~~~  225 (371)
                      + ++ |+++.+++|||+++ +.+++++|      ++|||+|+|++|+++ +|+| +++|+++|++++++++   ++++++
T Consensus       143 ~-~~-aal~~~~~ta~~al-~~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~  219 (357)
T 2b5w_A          143 A-EL-GFLIEPISITEKAL-EHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE  219 (357)
T ss_dssp             S-TT-GGGHHHHHHHHHHH-HHHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHH
T ss_pred             c-hh-hhhhchHHHHHHHH-HhcCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHH
Confidence            9 54 55777999999987 67889999      999999999999999 9999 9999955999999999   999999


Q ss_pred             HhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHH----
Q 017457          226 KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI----  301 (371)
Q Consensus       226 ~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~----  301 (371)
                      ++|++++ |+++   +++.+ ++++ ++++|+|||++|+...++.++++++++ |+++.+|.... ....++...+    
T Consensus       220 ~lGa~~v-~~~~---~~~~~-i~~~-~gg~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~~~~~~~~  291 (357)
T 2b5w_A          220 ELDATYV-DSRQ---TPVED-VPDV-YEQMDFIYEATGFPKHAIQSVQALAPN-GVGALLGVPSD-WAFEVDAGAFHREM  291 (357)
T ss_dssp             HTTCEEE-ETTT---SCGGG-HHHH-SCCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECCCCCC-CCCCCCHHHHHHHH
T ss_pred             HcCCccc-CCCc---cCHHH-HHHh-CCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEeCCCC-CCceecHHHHhHHH
Confidence            9999999 8876   67777 7777 559999999999986689999999998 99999997542 3345666665    


Q ss_pred             h-cCceEEEeeccCCCchhhHHHHHHHHHcC--CCCCCCceeEEEecccHHHHHHHHhcCceeeEEEEeCcC
Q 017457          302 L-KGRSVCGTYFGGLKPRSDIATLAQKYLDK--ELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWMDKL  370 (371)
Q Consensus       302 ~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~~~~~  370 (371)
                      + +++++.|+....   .++++++++++++|  ++ +.++++++|+++++++|++.+  +..+|+++.++++
T Consensus       292 ~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~~~~-~~~~i~~~~~l~~~~~A~~~~--~~~gKvvi~~~~~  357 (357)
T 2b5w_A          292 VLHNKALVGSVNSH---VEHFEAATVTFTKLPKWF-LEDLVTGVHPLSEFEAAFDDD--DTTIKTAIEFSTV  357 (357)
T ss_dssp             HHTTCEEEECCCCC---HHHHHHHHHHHHHSCHHH-HHHHEEEEEEGGGGGGGGCCS--TTCCEEEEECCCC
T ss_pred             HhCCeEEEEeccCC---HHHHHHHHHHHHhCchhh-hhhhcceeecHHHHHHHHHHh--CCCceEEEEecCC
Confidence            3 489999975443   57899999999999  76 667788999999999999988  4556999998864

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.5e-53  Score=399.65  Aligned_cols=329  Identities=21%  Similarity=0.319  Sum_probs=275.2

Q ss_pred             cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457            4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI   83 (371)
Q Consensus         4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~   83 (371)
                      .+++.++++++|.|+|++|||||||.+++||++|++++.|.++..  .+|.++|||++|+|+++|++|++|++||+|++.
T Consensus        30 ~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~P~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~  107 (369)
T 1uuf_A           30 SAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGT--VYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVG  107 (369)
T ss_dssp             STTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCC--CSSBCCCCCEEEEEEEECTTCCSCCTTCEEEEC
T ss_pred             CCCCCcEEEEecCCCCCCCeEEEEEEEEeecHHHHHHhcCCCCCC--CCCeecccCceEEEEEECCCCCCCCCCCEEEEc
Confidence            345679999999999999999999999999999999999876543  689999999999999999999999999999987


Q ss_pred             cC-CCCCCCccccCCCCCCCCCCCCCCC-----CCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCC-C
Q 017457           84 FH-RDCGECRDCKSSKSNTCSKFGRGYR-----PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH-I  156 (371)
Q Consensus        84 ~~-~~~~~c~~~~~~~~~~~~~~~~~~~-----~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~-l  156 (371)
                      +. ..||.|++|+.+.+++|........     .|...+                   |+|+||++++++.++++|++ +
T Consensus       108 ~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~-------------------G~~aeyv~v~~~~~~~~P~~~l  168 (369)
T 1uuf_A          108 CIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTL-------------------GGYSQQIVVHERYVLRIRHPQE  168 (369)
T ss_dssp             SEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCC-------------------CSSBSEEEEEGGGCEECCSCGG
T ss_pred             cCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCC-------------------CcccceEEEcchhEEECCCCCC
Confidence            75 4699999999999999986521100     011122                   49999999999999999999 9


Q ss_pred             CcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCC
Q 017457          157 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA  236 (371)
Q Consensus       157 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~  236 (371)
                      ++++||++++++.|||+++.+ .++++|++|||+|+|++|++++|+|+++|+ +|+++++++++++.++++|+++++|+.
T Consensus       169 s~~~aa~l~~~~~tA~~al~~-~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a~~lGa~~vi~~~  246 (369)
T 1uuf_A          169 QLAAVAPLLCAGITTYSPLRH-WQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGADEVVNSR  246 (369)
T ss_dssp             GHHHHGGGGTHHHHHHHHHHH-TTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEETT
T ss_pred             CHHHhhhhhhhHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEEeccc
Confidence            999999999999999998654 689999999999999999999999999999 899999999999999999999999887


Q ss_pred             CCCCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCC
Q 017457          237 TCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGL  315 (371)
Q Consensus       237 ~~~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~  315 (371)
                      +   .++.   .++. +++|+|||++|++..++.++++++++ |+++.+|..... ...++...++. ++++.|+.... 
T Consensus       247 ~---~~~~---~~~~-~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~~i~g~~~~~-  316 (369)
T 1uuf_A          247 N---ADEM---AAHL-KSFDFILNTVAAPHNLDDFTTLLKRD-GTMTLVGAPATP-HKSPEVFNLIMKRRAIAGSMIGG-  316 (369)
T ss_dssp             C---HHHH---HTTT-TCEEEEEECCSSCCCHHHHHTTEEEE-EEEEECCCC--------CHHHHHTTTCEEEECCSCC-
T ss_pred             c---HHHH---HHhh-cCCCEEEECCCCHHHHHHHHHHhccC-CEEEEeccCCCC-ccccCHHHHHhCCcEEEEeecCC-
Confidence            6   4433   3333 48999999999875589999999998 999999974321 11455555555 89999986443 


Q ss_pred             CchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCce-eeEEEEeCcC
Q 017457          316 KPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS-LRCIIWMDKL  370 (371)
Q Consensus       316 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvv~~~~~  370 (371)
                        .++++++++++++|++.+.  + ++|+|+++++|++.+.+++. +|+++.++++
T Consensus       317 --~~~~~~~~~l~~~g~i~~~--i-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~~  367 (369)
T 1uuf_A          317 --IPETQEMLDFCAEHGIVAD--I-EMIRADQINEAYERMLRGDVKYRFVIDNRTL  367 (369)
T ss_dssp             --HHHHHHHHHHHHHHTCCCC--E-EEECGGGHHHHHHHHHTTCSSSEEEEEGGGG
T ss_pred             --HHHHHHHHHHHHhCCCCcc--e-EEEcHHHHHHHHHHHHcCCCceEEEEecCCC
Confidence              5678999999999987653  5 67999999999999988775 4999998763

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=1.2e-53  Score=402.74  Aligned_cols=327  Identities=20%  Similarity=0.258  Sum_probs=274.4

Q ss_pred             cCCCCcEEEE--EecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCC-CcCCCCEE
Q 017457            4 IPGKPLVIEE--IEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE-EVKERDLV   80 (371)
Q Consensus         4 ~~~~~l~~~~--~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~-~~~~Gd~V   80 (371)
                      .++.++++++  +|.|+|+++||||||++++||++|++.+.|.++..  .+|.++|||++|+|+++|++|+ +|++||+|
T Consensus        14 ~~~~~l~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~p~v~GhE~~G~V~~vG~~v~~~~~~GdrV   91 (360)
T 1piw_A           14 SHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNM--KMPLVVGHEIVGKVVKLGPKSNSGLKVGQRV   91 (360)
T ss_dssp             CSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCC--CSSEECCCCEEEEEEEECTTCCSSCCTTCEE
T ss_pred             cCCCCeeEEeccccCCCCCCCeEEEEEEEeccchhhHHHhcCCCCCC--CCCcccCcCceEEEEEeCCCCCCCCCCCCEE
Confidence            3444688889  99999999999999999999999999999876544  6899999999999999999999 99999999


Q ss_pred             eec-cCCCCCCCccccCCCCCCCCCC-CC-CC--CCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCC
Q 017457           81 LPI-FHRDCGECRDCKSSKSNTCSKF-GR-GY--RPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH  155 (371)
Q Consensus        81 ~~~-~~~~~~~c~~~~~~~~~~~~~~-~~-~~--~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~  155 (371)
                      ++. ....|++|++|+.+.+++|... .. ..  ..|...+                   |+|+||+++++++++++|++
T Consensus        92 ~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~-------------------G~~aey~~v~~~~~~~iP~~  152 (360)
T 1piw_A           92 GVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQ-------------------GGYANYVRVHEHFVVPIPEN  152 (360)
T ss_dssp             EECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCC-------------------CSSBSEEEEEGGGEEECCTT
T ss_pred             EEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCC-------------------CcceeEEEEchhheEECCCC
Confidence            554 4578999999999999999864 11 00  0022223                   49999999999999999999


Q ss_pred             CCcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcC
Q 017457          156 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP  235 (371)
Q Consensus       156 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~  235 (371)
                      +++++||.+++++.|||+++.. +++++|++|||+|+|++|++++|+|+++|+ +|+++++++++++.++++|+++++++
T Consensus       153 ~~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v~~~  230 (360)
T 1piw_A          153 IPSHLAAPLLCGGLTVYSPLVR-NGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGADHYIAT  230 (360)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHH-TTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEEG
T ss_pred             CCHHHhhhhhhhHHHHHHHHHH-cCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCCEEEcC
Confidence            9999999999999999998754 899999999999999999999999999999 89999999999999999999999988


Q ss_pred             CCCCCc-cHHHHHHHhhCCCcCEEEECCCC--hHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEee
Q 017457          236 ATCGDK-TVSQVIKEMTDGGADYCFECIGL--TSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTY  311 (371)
Q Consensus       236 ~~~~~~-~~~~~i~~~~~gg~d~vid~~g~--~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~  311 (371)
                      .+   . ++.+.+.    +++|+|||++|+  ...++.++++++++ |+++.+|.... . ..++...++. ++++.|+.
T Consensus       231 ~~---~~~~~~~~~----~~~D~vid~~g~~~~~~~~~~~~~l~~~-G~iv~~g~~~~-~-~~~~~~~~~~~~~~i~g~~  300 (360)
T 1piw_A          231 LE---EGDWGEKYF----DTFDLIVVCASSLTDIDFNIMPKAMKVG-GRIVSISIPEQ-H-EMLSLKPYGLKAVSISYSA  300 (360)
T ss_dssp             GG---TSCHHHHSC----SCEEEEEECCSCSTTCCTTTGGGGEEEE-EEEEECCCCCS-S-CCEEECGGGCBSCEEEECC
T ss_pred             cC---chHHHHHhh----cCCCEEEECCCCCcHHHHHHHHHHhcCC-CEEEEecCCCC-c-cccCHHHHHhCCeEEEEEe
Confidence            76   4 5554433    489999999998  55588999999998 99999997433 1 1333334444 88999875


Q ss_pred             ccCCCchhhHHHHHHHHHcCCCCCCCceeEEEeccc--HHHHHHHHhcCcee-eEEEEeCc
Q 017457          312 FGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHD--INKAFDLLLEGKSL-RCIIWMDK  369 (371)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~a~~~~~~~~~~-kvvv~~~~  369 (371)
                      ...   .++++++++++++|++.+.  + ++|++++  +++|++.+.+++.. |+++.+++
T Consensus       301 ~~~---~~~~~~~~~l~~~g~l~~~--i-~~~~l~~~~~~~A~~~~~~~~~~gKvvi~~~~  355 (360)
T 1piw_A          301 LGS---IKELNQLLKLVSEKDIKIW--V-ETLPVGEAGVHEAFERMEKGDVRYRFTLVGYD  355 (360)
T ss_dssp             CCC---HHHHHHHHHHHHHTTCCCC--E-EEEESSHHHHHHHHHHHHHTCCSSEEEEECCH
T ss_pred             cCC---HHHHHHHHHHHHhCCCcce--E-EEEeccHhHHHHHHHHHHCCCCceEEEEecCc
Confidence            433   5689999999999987644  6 8999999  99999999887754 99998864

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=1.9e-53  Score=406.51  Aligned_cols=336  Identities=22%  Similarity=0.300  Sum_probs=283.4

Q ss_pred             CCCcEEEEEecCCC-CC-----CeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCE
Q 017457            6 GKPLVIEEIEVEPP-KA-----WEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDL   79 (371)
Q Consensus         6 ~~~l~~~~~~~~~~-~~-----~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~   79 (371)
                      ...++++++|.|+| ++     +||||||.+++||++|++++.|.++ .  .+|.++|||++|+|+++|++|++|++||+
T Consensus        11 ~~~l~~~~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~~-~--~~p~v~GhE~~G~V~~vG~~v~~~~vGDr   87 (398)
T 2dph_A           11 TRDLRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFI-V--PKGHVLGHEITGEVVEKGSDVELMDIGDL   87 (398)
T ss_dssp             TTEEEEEEECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTSSC-C--CTTCBCCCCEEEEEEEECTTCCSCCTTCE
T ss_pred             CCCEEEEEccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCCC-C--CCCcccCCceEEEEEEECCCCCCCCCCCE
Confidence            34688999999987 68     9999999999999999999998643 2  57899999999999999999999999999


Q ss_pred             EeeccCCCCCCCccccCCCCCCCCCCCCC-----CCCCCCCCCCccccccCCceeecccCcccccceeeeecc--eeEEC
Q 017457           80 VLPIFHRDCGECRDCKSSKSNTCSKFGRG-----YRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKI  152 (371)
Q Consensus        80 V~~~~~~~~~~c~~~~~~~~~~~~~~~~~-----~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~~  152 (371)
                      |++.+...||.|++|+++.+++|......     ..+|+...                ...|+|+||++++++  .++++
T Consensus        88 V~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~~----------------~~~G~~aey~~v~~~~~~~~~i  151 (398)
T 2dph_A           88 VSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLK----------------GWSGGQAEYVLVPYADYMLLKF  151 (398)
T ss_dssp             EECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTBS----------------SCCCSSBSEEEESSHHHHCEEC
T ss_pred             EEEcCCCCCCCChhhhCcCcccCCCccccccccccccccccC----------------CCCceeeeeEEeccccCeEEEC
Confidence            99999999999999999999999862110     01222100                012599999999987  89999


Q ss_pred             CCCCCcch----hhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhC
Q 017457          153 TPHIPLGI----ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG  228 (371)
Q Consensus       153 P~~l~~~~----aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lg  228 (371)
                      |+++++++    ||++++++.|||+++ +.+++++|++|||+|+|++|++++|+|+++|+++|+++++++++++.++++|
T Consensus       152 P~~~~~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lG  230 (398)
T 2dph_A          152 GDKEQAMEKIKDLTLISDILPTGFHGC-VSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAG  230 (398)
T ss_dssp             SSHHHHHHTHHHHTTTTTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTT
T ss_pred             CCCCChhhhcchhhhhcCHHHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcC
Confidence            99999998    888999999999987 7889999999999999999999999999999978999999999999999999


Q ss_pred             cceEEcCCCCCCccH-HHHHHHhhCC-CcCEEEECCCChH--------------HHHHHHHHhhcCCceEEEECccCC--
Q 017457          229 ITDFINPATCGDKTV-SQVIKEMTDG-GADYCFECIGLTS--------------VMNDAFNSSREGWGKTVILGVEMH--  290 (371)
Q Consensus       229 a~~v~~~~~~~~~~~-~~~i~~~~~g-g~d~vid~~g~~~--------------~~~~~~~~l~~~~G~~v~~g~~~~--  290 (371)
                      ++ ++++.+   .++ .+.+++++++ ++|+|||++|+..              .++.++++++++ |+++.+|....  
T Consensus       231 a~-~i~~~~---~~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~g-G~iv~~G~~~~~~  305 (398)
T 2dph_A          231 FE-TIDLRN---SAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAG-GAIGIPGIYVGSD  305 (398)
T ss_dssp             CE-EEETTS---SSCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEE-EEEECCSCCCSCC
T ss_pred             Cc-EEcCCC---cchHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcC-CEEEEeccccccc
Confidence            96 888876   565 8889999988 9999999999752              589999999998 99999997421  


Q ss_pred             ---------CCceecCHHHHhc-CceEEEeeccCCCchhhHHHHHHHHHcCCCC--CCCceeEEEecccHHHHHHHHhcC
Q 017457          291 ---------GSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKELN--LGEFITHEVSFHDINKAFDLLLEG  358 (371)
Q Consensus       291 ---------~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~a~~~~~~~  358 (371)
                               .....++...++. ++++.|+...   ..++++++++++++|++.  +.++++++|+|+++++|++.+.++
T Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~---~~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l~~~~~A~~~~~~~  382 (398)
T 2dph_A          306 PDPVNKDAGSGRLHLDFGKMWTKSIRIMTGMAP---VTNYNRHLTEAILWDQMPYLSKVMNIEVITLDQAPDGYAKFDKG  382 (398)
T ss_dssp             SSCSSHHHHTTEEEEEHHHHHHTTCEEECSSCC---GGGTHHHHHHHHHTTCCHHHHHHHCEEEECSTTHHHHHHHHHTT
T ss_pred             cccccccccCCcccccHHHHhhcCCEEEEeccC---cHHHHHHHHHHHHcCCCCccchhhEEEEEcHHHHHHHHHHHhcC
Confidence                     1234555555544 8888876422   246789999999999988  766788999999999999999887


Q ss_pred             ceeeEEEEeCc
Q 017457          359 KSLRCIIWMDK  369 (371)
Q Consensus       359 ~~~kvvv~~~~  369 (371)
                      +.+|+++.++.
T Consensus       383 ~~gKvvv~~~~  393 (398)
T 2dph_A          383 SPAKFVIDPHG  393 (398)
T ss_dssp             CSCEEEECTTS
T ss_pred             CceEEEEecCc
Confidence            66899998754

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=9.3e-53  Score=401.99  Aligned_cols=337  Identities=24%  Similarity=0.315  Sum_probs=278.9

Q ss_pred             CCcEEEEEecCCCC-CCe------EEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCE
Q 017457            7 KPLVIEEIEVEPPK-AWE------IRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDL   79 (371)
Q Consensus         7 ~~l~~~~~~~~~~~-~~e------VlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~   79 (371)
                      ..++++++|.|+|. ++|      |||||.+++||++|++++.|.++ .  .+|.++|||++|+|+++|++|++|++||+
T Consensus        12 ~~l~~~~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~--~~p~v~GhE~~G~V~~vG~~v~~~~vGDr   88 (398)
T 1kol_A           12 GKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT-A--QVGLVLGHEITGEVIEKGRDVENLQIGDL   88 (398)
T ss_dssp             TEEEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC-C--CTTCBCCCCEEEEEEEECTTCCSCCTTCE
T ss_pred             CceEEEEecCCCCCCCCcccccceEEEEEEEEeechhhHHHHcCCCC-C--CCCcccCcccEEEEEEECCCCCcCCCCCE
Confidence            45889999999997 898      99999999999999999998653 2  57899999999999999999999999999


Q ss_pred             EeeccCCCCCCCccccCCCCCCCCCCCCCC---CCCCCCCCCccccccCCceeecccCcccccceeeeecc--eeEECCC
Q 017457           80 VLPIFHRDCGECRDCKSSKSNTCSKFGRGY---RPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKITP  154 (371)
Q Consensus        80 V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~---~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~~P~  154 (371)
                      |++.+...||.|++|+.+.+++|.......   ..|+...+               ...|+|+||++++++  +++++|+
T Consensus        89 V~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~---------------~~~G~~aey~~v~~~~~~~~~~P~  153 (398)
T 1kol_A           89 VSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMG---------------DWTGGQAEYVLVPYADFNLLKLPD  153 (398)
T ss_dssp             EECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSC---------------CBCCCSBSEEEESSHHHHCEECSC
T ss_pred             EEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccCC---------------CCCceeeeEEEecchhCeEEECCC
Confidence            999888999999999999999998754210   01211000               012599999999986  8999999


Q ss_pred             CCCcch----hhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcc
Q 017457          155 HIPLGI----ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT  230 (371)
Q Consensus       155 ~l~~~~----aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~  230 (371)
                      ++++++    ++++++++.|||+++. ..++++|++|||+|+|++|++++|+||++|+++|++++++++|+++++++|++
T Consensus       154 ~~~~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~  232 (398)
T 1kol_A          154 RDKAMEKIRDLTCLSDILPTGYHGAV-TAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFE  232 (398)
T ss_dssp             HHHHHHTHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCE
T ss_pred             CcchhhhcccccccccHHHHHHHHHH-HcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCc
Confidence            999988    7888889999999874 78999999999999999999999999999997799999999999999999997


Q ss_pred             eEEcCCCCCCccHHHHHHHhhCC-CcCEEEECCCCh---------------HHHHHHHHHhhcCCceEEEECccCC-C--
Q 017457          231 DFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLT---------------SVMNDAFNSSREGWGKTVILGVEMH-G--  291 (371)
Q Consensus       231 ~v~~~~~~~~~~~~~~i~~~~~g-g~d~vid~~g~~---------------~~~~~~~~~l~~~~G~~v~~g~~~~-~--  291 (371)
                       ++++.+  ..++.+.+++++++ ++|+|||++|+.               ..++.++++++++ |+++.+|.... .  
T Consensus       233 -~i~~~~--~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~  308 (398)
T 1kol_A          233 -IADLSL--DTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVA-GKIGIPGLYVTEDPG  308 (398)
T ss_dssp             -EEETTS--SSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEE-EEEEECSCCCSCCTT
T ss_pred             -EEccCC--cchHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcC-CEEEEeccccCCccc
Confidence             777765  12378889999987 999999999976               2589999999998 99999996411 1  


Q ss_pred             --------CceecCHHHHhc-CceEEEeeccCCCchhhHHHHHHHHHcCCCC-CCCceeEEEecccHHHHHHHHhcCcee
Q 017457          292 --------SPISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKELN-LGEFITHEVSFHDINKAFDLLLEGKSL  361 (371)
Q Consensus       292 --------~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~a~~~~~~~~~~  361 (371)
                              ....++...++. ++++.++..   ...++++++++++++|++. ..++++++|+|+++++||+.+.+++.+
T Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~l~~~g~l~~~~~~i~~~~~l~~~~~A~~~~~~~~~g  385 (398)
T 1kol_A          309 AVDAAAKIGSLSIRFGLGWAKSHSFHTGQT---PVMKYNRALMQAIMWDRINIAEVVGVQVISLDDAPRGYGEFDAGVPK  385 (398)
T ss_dssp             CSSHHHHTTCCCCCHHHHHHTTCEEEESSC---CHHHHHHHHHHHHHTTSCCHHHHHTEEEECGGGHHHHHHHHHHTCSC
T ss_pred             ccccccccccccccHHHHhhcccEEEeccc---ChHHHHHHHHHHHHcCCCCCccceeEEEEcHHHHHHHHHHHhCCCce
Confidence                    123455555444 788887532   2245678899999999887 345678999999999999999887668


Q ss_pred             eEEEEeCc
Q 017457          362 RCIIWMDK  369 (371)
Q Consensus       362 kvvv~~~~  369 (371)
                      |+++.++.
T Consensus       386 Kvvi~~~~  393 (398)
T 1kol_A          386 KFVIDPHK  393 (398)
T ss_dssp             EEEECTTC
T ss_pred             EEEEEeCC
Confidence            99998753

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=6.6e-52  Score=390.35  Aligned_cols=332  Identities=22%  Similarity=0.343  Sum_probs=275.0

Q ss_pred             cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457            4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI   83 (371)
Q Consensus         4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~   83 (371)
                      .++.+++++++|.|+|++|||||||.+++||++|++.+.|.++..  .+|.++|||++|+|+++|++|++|++||+|++.
T Consensus        17 ~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~P~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~   94 (357)
T 2cf5_A           17 DPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMS--NYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVG   94 (357)
T ss_dssp             STTCCEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHTCTTTCC--CSSBCCCCEEEEEEEEECSSCCSCCTTCEEEEC
T ss_pred             cCCCCcEEEEecCCCCCCCEEEEEEEEEeecchhhhhhcCCCCCC--CCCeecCcceeEEEEEECCCCCCCCCCCEEEEc
Confidence            445679999999999999999999999999999999998876543  689999999999999999999999999999875


Q ss_pred             cC-CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhh
Q 017457           84 FH-RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC  162 (371)
Q Consensus        84 ~~-~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa  162 (371)
                      +. ..||.|++|+.+.+++|....... .+....|              ....|+|+||++++++.++++|+++|+++||
T Consensus        95 ~~~~~Cg~C~~c~~g~~~~C~~~~~~~-~~~~~~g--------------~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa  159 (357)
T 2cf5_A           95 CLVGCCGGCSPCERDLEQYCPKKIWSY-NDVYING--------------QPTQGGFAKATVVHQKFVVKIPEGMAVEQAA  159 (357)
T ss_dssp             SEEECCSSSHHHHTTCGGGCTTCEETT-TSBCTTS--------------CBCCCSSBSCEEEEGGGEEECCSSCCHHHHT
T ss_pred             CCCCCCCCChHHhCcCcccCCCccccc-cccccCC--------------CCCCCccccEEEechhhEEECcCCCCHHHhh
Confidence            54 579999999999999996543210 0000011              1123599999999999999999999999999


Q ss_pred             ccccchhhhHHHHHHHcCCC-CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhCcceEEcCCCCCC
Q 017457          163 LLSCGVSTGVGAAWKVAGVE-VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFINPATCGD  240 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~-~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga~~v~~~~~~~~  240 (371)
                      .+++++.|||+++ ...+++ +|++|||+|+|++|++++|+|+++|+ +|+++++++++++.++ ++|+++++++++   
T Consensus       160 ~l~~~~~ta~~~l-~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~---  234 (357)
T 2cf5_A          160 PLLCAGVTVYSPL-SHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSNKKREEALQDLGADDYVIGSD---  234 (357)
T ss_dssp             GGGTHHHHHHHHH-HHTSTTSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHHTTSCCSCEEETTC---
T ss_pred             hhhhhHHHHHHHH-HhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHcCCceeecccc---
Confidence            9999999999976 457888 99999999999999999999999999 9999999999999988 899999998765   


Q ss_pred             ccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCchhh
Q 017457          241 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSD  320 (371)
Q Consensus       241 ~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  320 (371)
                      .   +.+++.++ ++|+|||++|.+..++.++++++++ |+++.+|...... ..++...+.+++++.|+....   .++
T Consensus       235 ~---~~~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~-~~~~~~~~~~~~~i~g~~~~~---~~~  305 (357)
T 2cf5_A          235 Q---AKMSELAD-SLDYVIDTVPVHHALEPYLSLLKLD-GKLILMGVINNPL-QFLTPLLMLGRKVITGSFIGS---MKE  305 (357)
T ss_dssp             H---HHHHHSTT-TEEEEEECCCSCCCSHHHHTTEEEE-EEEEECSCCSSCC-CCCHHHHHHHTCEEEECCSCC---HHH
T ss_pred             H---HHHHHhcC-CCCEEEECCCChHHHHHHHHHhccC-CEEEEeCCCCCCc-cccCHHHHhCccEEEEEccCC---HHH
Confidence            2   34555554 8999999999875589999999998 9999999743221 114444233389999986433   567


Q ss_pred             HHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEeCc
Q 017457          321 IATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDK  369 (371)
Q Consensus       321 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~~~  369 (371)
                      ++++++++++|++.+.  + ++||++++++|++.+.+++.. |+++.+++
T Consensus       306 ~~~~~~l~~~g~l~~~--~-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  352 (357)
T 2cf5_A          306 TEEMLEFCKEKGLSSI--I-EVVKMDYVNTAFERLEKNDVRYRFVVDVEG  352 (357)
T ss_dssp             HHHHHHHHHHTTCCCC--E-EEEEGGGHHHHHHHHHTTCSSSEEEEETTS
T ss_pred             HHHHHHHHHcCCCCCc--e-EEEeHHHHHHHHHHHHCCCCceEEEEeCCc
Confidence            9999999999988653  5 799999999999999887754 99999876

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=4.6e-51  Score=385.75  Aligned_cols=331  Identities=21%  Similarity=0.344  Sum_probs=276.4

Q ss_pred             cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457            4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI   83 (371)
Q Consensus         4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~   83 (371)
                      .++..++++++|.|+|.+|||||||.+++||++|++.+.|.++..  .+|.++|||++|+|+++|++|++|++||+|++.
T Consensus        24 ~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~P~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~  101 (366)
T 1yqd_A           24 DQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFS--MYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVG  101 (366)
T ss_dssp             STTCCEEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHHTSSSCC--CSSBCCCCCEEEEEEEECTTCCSCCTTCEEEEC
T ss_pred             CCCCCcEEEEccCCCCCCCeEEEEEEEEeechhhHHHHcCCCCCC--CCCEecccceEEEEEEECCCCCcCCCCCEEEEc
Confidence            345679999999999999999999999999999999998876544  689999999999999999999999999999875


Q ss_pred             cC-CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhh
Q 017457           84 FH-RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC  162 (371)
Q Consensus        84 ~~-~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa  162 (371)
                      +. ..||.|++|+.+.+++|....... .+....|              ....|+|+||+++++++++++|+++|+++||
T Consensus       102 ~~~~~Cg~C~~c~~g~~~~C~~~~~~~-~~~~~~g--------------~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa  166 (366)
T 1yqd_A          102 CLVGACHSCESCANDLENYCPKMILTY-ASIYHDG--------------TITYGGYSNHMVANERYIIRFPDNMPLDGGA  166 (366)
T ss_dssp             SEEECCSSSHHHHTTCGGGCTTCEESS-SSBCTTS--------------CBCCCSSBSEEEEEGGGCEECCTTSCTTTTG
T ss_pred             CCcCCCCCChhhhCcCcccCCcccccc-cccccCC--------------CcCCCccccEEEEchhhEEECCCCCCHHHhh
Confidence            54 589999999999999996543210 0110011              1122599999999999999999999999999


Q ss_pred             ccccchhhhHHHHHHHcCCC-CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhCcceEEcCCCCCC
Q 017457          163 LLSCGVSTGVGAAWKVAGVE-VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFINPATCGD  240 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~-~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga~~v~~~~~~~~  240 (371)
                      .+++++.|||+++. ..+++ +|++|||+|+|++|++++|+|+++|+ +|+++++++++++.++ ++|+++++|+.+   
T Consensus       167 ~l~~~~~ta~~al~-~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~---  241 (366)
T 1yqd_A          167 PLLCAGITVYSPLK-YFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGS-KVTVISTSPSKKEEALKNFGADSFLVSRD---  241 (366)
T ss_dssp             GGGTHHHHHHHHHH-HTTCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGHHHHHHTSCCSEEEETTC---
T ss_pred             hhhhhHHHHHHHHH-hcCcCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCceEEeccC---
Confidence            99999999999764 56788 99999999999999999999999999 9999999999999877 899999998765   


Q ss_pred             ccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchh
Q 017457          241 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRS  319 (371)
Q Consensus       241 ~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~  319 (371)
                      .   +.+.+.++ ++|+|||++|....++.++++++++ |+++.+|....  ...++...++. ++++.|+....   .+
T Consensus       242 ~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~~---~~  311 (366)
T 1yqd_A          242 Q---EQMQAAAG-TLDGIIDTVSAVHPLLPLFGLLKSH-GKLILVGAPEK--PLELPAFSLIAGRKIVAGSGIGG---MK  311 (366)
T ss_dssp             H---HHHHHTTT-CEEEEEECCSSCCCSHHHHHHEEEE-EEEEECCCCSS--CEEECHHHHHTTTCEEEECCSCC---HH
T ss_pred             H---HHHHHhhC-CCCEEEECCCcHHHHHHHHHHHhcC-CEEEEEccCCC--CCCcCHHHHHhCCcEEEEecCCC---HH
Confidence            3   34555554 8999999999875588999999998 99999997432  34566666655 88999875433   46


Q ss_pred             hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEeCc
Q 017457          320 DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDK  369 (371)
Q Consensus       320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~~~  369 (371)
                      +++++++++++|++.+.  + ++|+|+++++||+.+.+++.. |+++.+++
T Consensus       312 ~~~~~~~l~~~g~l~~~--~-~~~~l~~~~~A~~~~~~~~~~gKvvl~~~~  359 (366)
T 1yqd_A          312 ETQEMIDFAAKHNITAD--I-EVISTDYLNTAMERLAKNDVRYRFVIDVGN  359 (366)
T ss_dssp             HHHHHHHHHHHTTCCCC--E-EEECGGGHHHHHHHHHTTCCSSEEEECHHH
T ss_pred             HHHHHHHHHHcCCCCCc--e-EEEcHHHHHHHHHHHHcCCcceEEEEEccc
Confidence            78999999999988754  5 799999999999999887754 99998743

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=3e-50  Score=390.23  Aligned_cols=330  Identities=15%  Similarity=0.156  Sum_probs=274.7

Q ss_pred             CCcEEEEEecCCCCCCeEEEEEeEeecccccccccc----------------cCCCCCCCCCC-ccccccccEEEEEeCC
Q 017457            7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWK----------------SSTDLPKLPLP-VIFGHEAVGVVESVGE   69 (371)
Q Consensus         7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~----------------g~~~~~~~~~p-~~~G~e~~G~Vv~vG~   69 (371)
                      +.++++++|.|+|++|||||||.+++||++|++...                |.+... ..+| .++|||++|+|+++|+
T Consensus        48 ~~l~~~e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~P~~v~GhE~~G~V~~vG~  126 (447)
T 4a0s_A           48 KSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWATR-HDQPYHVLGSDCSGVVVRTGI  126 (447)
T ss_dssp             HHCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHHTTCGGGGG-GCCSEEECCSCEEEEEEEECT
T ss_pred             CCceEEeccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhcccCccccc-cCCCCcccccceeEEEEEECC
Confidence            468999999999999999999999999999975432                221111 1466 6999999999999999


Q ss_pred             CCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeeccee
Q 017457           70 YVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHV  149 (371)
Q Consensus        70 ~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~  149 (371)
                      +|++|++||+|++.+...|+.|..| .+.++.|.....   .|+....                  |+|+||++++++++
T Consensus       127 ~V~~~~vGDrV~~~~~~~~~~~~~~-~~~~~~c~~~~~---~G~~~~~------------------G~~aey~~v~~~~~  184 (447)
T 4a0s_A          127 GVRRWKPGDHVIVHPAHVDEQEPAT-HGDGMLGTEQRA---WGFETNF------------------GGLAEYGVVRASQL  184 (447)
T ss_dssp             TCCSCCTTCEEEECSEECCTTSGGG-GTCTTCSTTCEE---TTTTSSS------------------CSSBSEEEEEGGGE
T ss_pred             CCCCCCCCCEEEEecCcCcCccccc-cccccccccccc---ccccCCC------------------CceeeeeecCHHHc
Confidence            9999999999999998889888755 467899987764   5554431                  49999999999999


Q ss_pred             EECCCCCCcchhhccccchhhhHHHHHH--HcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 017457          150 VKITPHIPLGIACLLSCGVSTGVGAAWK--VAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK  226 (371)
Q Consensus       150 ~~~P~~l~~~~aa~~~~~~~ta~~~l~~--~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~  226 (371)
                      +++|+++++++||++++++.|||+++..  .+++++|++|||+|+ |++|++++|+|+++|+ +|+++++++++++.+++
T Consensus       185 ~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga-~vi~~~~~~~~~~~~~~  263 (447)
T 4a0s_A          185 LPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGG-IPVAVVSSAQKEAAVRA  263 (447)
T ss_dssp             EECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH
T ss_pred             EECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHh
Confidence            9999999999999999999999998764  388999999999998 9999999999999999 89999999999999999


Q ss_pred             hCcceEEcCCCCCC---------------ccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCC
Q 017457          227 FGITDFINPATCGD---------------KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG  291 (371)
Q Consensus       227 lga~~v~~~~~~~~---------------~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~  291 (371)
                      +|+++++++.+.+.               ..+.+.+++.+++++|++||++|+.. ++.++++++++ |+++.+|... .
T Consensus       264 lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~~~-~~~~~~~l~~~-G~iv~~G~~~-~  340 (447)
T 4a0s_A          264 LGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVT-FGLSVIVARRG-GTVVTCGSSS-G  340 (447)
T ss_dssp             TTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCHHH-HHHHHHHSCTT-CEEEESCCTT-C
T ss_pred             cCCCEEEecccccccccccccccccchhhhHHHHHHHHHhCCCceEEEECCCchH-HHHHHHHHhcC-CEEEEEecCC-C
Confidence            99999987654110               01367788888449999999999865 89999999998 9999999743 3


Q ss_pred             CceecCHHHHhc-CceEEEeeccCCCchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEeC
Q 017457          292 SPISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMD  368 (371)
Q Consensus       292 ~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~~  368 (371)
                      ....++...++. ++++.|+....   .+++.++++++++|++.  ++++++|+|+++++||+.+.+++.. |++|.+.
T Consensus       341 ~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~GKvvv~~~  414 (447)
T 4a0s_A          341 YLHTFDNRYLWMKLKKIVGSHGAN---HEEQQATNRLFESGAVV--PAMSAVYPLAEAAEACRVVQTSRQVGKVAVLCM  414 (447)
T ss_dssp             SEEEEEHHHHHHTTCEEEECCSCC---HHHHHHHHHHHHTTSSC--CCEEEEEEGGGHHHHHHHHHTTCCSSEEEEESS
T ss_pred             cccccCHHHHHhCCCEEEecCCCC---HHHHHHHHHHHHcCCcc--cceeEEEcHHHHHHHHHHHhcCCCceEEEEEeC
Confidence            345555555555 78999886444   46788999999999775  5688999999999999999887765 9988873

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=2.3e-50  Score=391.62  Aligned_cols=331  Identities=18%  Similarity=0.178  Sum_probs=277.5

Q ss_pred             CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccC-------------CCC--CCCCCC-ccccccccEEEEEeCCC
Q 017457            7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSS-------------TDL--PKLPLP-VIFGHEAVGVVESVGEY   70 (371)
Q Consensus         7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~-------------~~~--~~~~~p-~~~G~e~~G~Vv~vG~~   70 (371)
                      ++++++++|.|+|+++||||||.+++||++|++...+.             ...  ....+| .++|||++|+|+++|++
T Consensus        56 ~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~P~~v~GhE~~G~Vv~vG~~  135 (456)
T 3krt_A           56 KSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPG  135 (456)
T ss_dssp             HHCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHHHHHTSCHHHHTTCCSEEECCSCCEEEEEEECTT
T ss_pred             CCcEEEEccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhhhccccccccccCCCCcccccceeEEEEEEECCC
Confidence            46899999999999999999999999999998764321             100  001467 69999999999999999


Q ss_pred             CCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeE
Q 017457           71 VEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVV  150 (371)
Q Consensus        71 v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~  150 (371)
                      |++|++||+|++.+. .|..|..|..+.++.|.....   .|+...                  .|+|+||+++++++++
T Consensus       136 v~~~~vGdrV~~~~~-~c~~~~~~~~~~~~~c~~~~~---~G~~~~------------------~G~~aey~~v~~~~~~  193 (456)
T 3krt_A          136 VNAWQAGDEVVAHCL-SVELESSDGHNDTMLDPEQRI---WGFETN------------------FGGLAEIALVKSNQLM  193 (456)
T ss_dssp             CCSCCTTCEEEECCE-ECCCCSGGGTTSGGGCTTCEE---TTTTSS------------------SCSSBSEEEEEGGGEE
T ss_pred             CCCCCCCCEEEEeCC-cccccccccccccccCccccc---cccCCC------------------CCcccceEEechHHee
Confidence            999999999998654 588888898899999987765   555443                  1499999999999999


Q ss_pred             ECCCCCCcchhhccccchhhhHHHHHHH--cCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh
Q 017457          151 KITPHIPLGIACLLSCGVSTGVGAAWKV--AGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF  227 (371)
Q Consensus       151 ~~P~~l~~~~aa~~~~~~~ta~~~l~~~--~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l  227 (371)
                      ++|+++++++||++++++.|||+++...  +++++|++|||+|+ |++|++++|+|+++|+ +|++++++++++++++++
T Consensus       194 ~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga-~vi~~~~~~~~~~~~~~l  272 (456)
T 3krt_A          194 PKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGA-NPICVVSSPQKAEICRAM  272 (456)
T ss_dssp             ECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHH
T ss_pred             ECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHhh
Confidence            9999999999999999999999987654  78999999999998 9999999999999999 899998999999999999


Q ss_pred             CcceEEcCCCCCC--------------ccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCC
Q 017457          228 GITDFINPATCGD--------------KTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGS  292 (371)
Q Consensus       228 ga~~v~~~~~~~~--------------~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~  292 (371)
                      |+++++++.+.+.              ..+.+.+++++++ ++|+|||++|+.. +..++++++++ |+++.+|... ..
T Consensus       273 Ga~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~~~-~~~~~~~l~~~-G~iv~~G~~~-~~  349 (456)
T 3krt_A          273 GAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRET-FGASVFVTRKG-GTITTCASTS-GY  349 (456)
T ss_dssp             TCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCHHH-HHHHHHHEEEE-EEEEESCCTT-CS
T ss_pred             CCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCchh-HHHHHHHhhCC-cEEEEEecCC-Cc
Confidence            9999999876211              1235788899987 9999999999955 99999999998 9999999743 33


Q ss_pred             ceecCHHHHhc-CceEEEeeccCCCchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEeC
Q 017457          293 PISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMD  368 (371)
Q Consensus       293 ~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~~  368 (371)
                      ...++...+.. ++++.|+....   ..++.++++++++|++.  ++++++|+|+++++|++.+.+++.. |++|.+.
T Consensus       350 ~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~eA~~~l~~~~~~GKvvv~~~  422 (456)
T 3krt_A          350 MHEYDNRYLWMSLKRIIGSHFAN---YREAWEANRLIAKGRIH--PTLSKVYSLEDTGQAAYDVHRNLHQGKVGVLCL  422 (456)
T ss_dssp             EEEEEHHHHHHTTCEEEECCSCC---HHHHHHHHHHHHTTSSC--CCEEEEEEGGGHHHHHHHHHTTCSSSEEEEESS
T ss_pred             ccccCHHHHHhcCeEEEEeccCC---HHHHHHHHHHHHcCCcc--cceeEEEcHHHHHHHHHHHHhCCCCCcEEEEeC
Confidence            45566555555 78999986544   45677899999999775  5688999999999999999887765 9988763

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=3.4e-51  Score=386.89  Aligned_cols=322  Identities=18%  Similarity=0.288  Sum_probs=267.8

Q ss_pred             CCCCcEEEEEecCCCCC-CeEEEEEeEeeccccccccccc--CCCCCCCCC---CccccccccEEEEEeCCCCCCcCCCC
Q 017457            5 PGKPLVIEEIEVEPPKA-WEIRIKILCTSLCHSDVTFWKS--STDLPKLPL---PVIFGHEAVGVVESVGEYVEEVKERD   78 (371)
Q Consensus         5 ~~~~l~~~~~~~~~~~~-~eVlVkv~~~~i~~~D~~~~~g--~~~~~~~~~---p~~~G~e~~G~Vv~vG~~v~~~~~Gd   78 (371)
                      ++.+++++++|.|+|++ +||||||.|++||++|++++.|  .++..  .+   |.++|||++|+|++  ++ ++|++||
T Consensus         9 ~g~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~--~~~~~p~v~G~E~~G~V~~--~~-~~~~~GD   83 (366)
T 2cdc_A            9 PNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTL--PKGKDFLVLGHEAIGVVEE--SY-HGFSQGD   83 (366)
T ss_dssp             TSCCCEEEECCGGGSCCCSSEEEEEEEEEECHHHHHHHTTCC---------CCSCEECCSEEEEEECS--CC-SSCCTTC
T ss_pred             CCCceEEEECcCCCCCCCCEEEEEEEEEeeccccHHHHcCCCCCCCC--CcCCCCCcCCcceEEEEEe--CC-CCCCCCC
Confidence            34349999999999999 9999999999999999999998  55422  46   89999999999999  66 8899999


Q ss_pred             EEeeccCCCCCCCccccCCCCCCCCCCCCCCCC--CCC-CCCCccccccCCceeecccCcccccceeeeecceeEECCCC
Q 017457           79 LVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRP--NMP-RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH  155 (371)
Q Consensus        79 ~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~--g~~-~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~  155 (371)
                      +|++.+...||.|++|+.+++++|.....   .  |+. .+                   |+|+||++++++.++++|++
T Consensus        84 rV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~~~g~~~~~-------------------G~~aey~~v~~~~~~~iP~~  141 (366)
T 2cdc_A           84 LVMPVNRRGCGICRNCLVGRPDFCETGEF---GEAGIHKMD-------------------GFMREWWYDDPKYLVKIPKS  141 (366)
T ss_dssp             EEEECSEECCSSSHHHHTTCGGGCSSSCC---EEETTBEEC-------------------CSCBSEEEECGGGEEEECGG
T ss_pred             EEEEcCCCCCCCChhhhCcCcccCCCCCc---ccCCccCCC-------------------CceeEEEEechHHeEECcCC
Confidence            99999999999999999999999986542   2  332 23                   49999999999999999999


Q ss_pred             CCcchhhccccchhhhHHHHH--H--HcCCC--C-------CCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh---h
Q 017457          156 IPLGIACLLSCGVSTGVGAAW--K--VAGVE--V-------GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP---E  219 (371)
Q Consensus       156 l~~~~aa~~~~~~~ta~~~l~--~--~~~~~--~-------g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~---~  219 (371)
                      ++ ++|+ ++.++.|||+++.  .  ..+++  +       |++|||+|+|++|++++|+|+++|+ +|+++++++   +
T Consensus       142 l~-~~Aa-l~~~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~  218 (366)
T 2cdc_A          142 IE-DIGI-LAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPTEV  218 (366)
T ss_dssp             GT-TTGG-GHHHHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCCHH
T ss_pred             cc-hhhh-hcCcHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccchH
Confidence            99 7765 6669999999876  4  77888  8       9999999999999999999999999 999999998   8


Q ss_pred             HHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCChHHH-HHHHHHhhcCCceEEEECccCCCCceecCH
Q 017457          220 KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVM-NDAFNSSREGWGKTVILGVEMHGSPISLNS  298 (371)
Q Consensus       220 ~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~~~~~-~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~  298 (371)
                      +++.++++|++++ | .+    ++.+.+.+ +++++|++||++|+...+ +.++++++++ |+++.+|.... ....++.
T Consensus       219 ~~~~~~~~ga~~v-~-~~----~~~~~~~~-~~~~~d~vid~~g~~~~~~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~  289 (366)
T 2cdc_A          219 EQTVIEETKTNYY-N-SS----NGYDKLKD-SVGKFDVIIDATGADVNILGNVIPLLGRN-GVLGLFGFSTS-GSVPLDY  289 (366)
T ss_dssp             HHHHHHHHTCEEE-E-CT----TCSHHHHH-HHCCEEEEEECCCCCTHHHHHHGGGEEEE-EEEEECSCCCS-CEEEEEH
T ss_pred             HHHHHHHhCCcee-c-hH----HHHHHHHH-hCCCCCEEEECCCChHHHHHHHHHHHhcC-CEEEEEecCCC-CccccCh
Confidence            9999999999988 6 33    45556666 556899999999987557 9999999998 99999997433 2355665


Q ss_pred             HH---Hhc-CceEEEeeccCCCchhhHHHHHHHHHcCCCC----CCCceeEEEecccHHHHHHH--HhcCceeeEEEEeC
Q 017457          299 IE---ILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKELN----LGEFITHEVSFHDINKAFDL--LLEGKSLRCIIWMD  368 (371)
Q Consensus       299 ~~---~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~----~~~~~~~~~~~~~~~~a~~~--~~~~~~~kvvv~~~  368 (371)
                      ..   ++. ++++.|+...   ..++++++++++++|+++    +.++++++|+|+++++||+.  +.++..+|+++.++
T Consensus       290 ~~~~~~~~~~~~i~g~~~~---~~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l~~~~~A~~~l~~~~~~~gKvvi~~~  366 (366)
T 2cdc_A          290 KTLQEIVHTNKTIIGLVNG---QKPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLREKEHGEIKIRILWE  366 (366)
T ss_dssp             HHHHHHHHTTCEEEECCCC---CHHHHHHHHHHHHHHHHHSHHHHTTSEEEEEETTCHHHHHHHHHCCCTTCCEEEEECC
T ss_pred             hhhHHHHhcCcEEEEecCC---CHHHHHHHHHHHHcCCCCcccchhhcEEEEEcHHHHHHHHHHHhhhcCCceEEEEecC
Confidence            55   444 8999987543   257899999999999876    77788899999999999999  55444459999874

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=1.6e-49  Score=373.47  Aligned_cols=303  Identities=19%  Similarity=0.221  Sum_probs=264.3

Q ss_pred             CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCC
Q 017457            7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHR   86 (371)
Q Consensus         7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~   86 (371)
                      +.+++++.|.|+|++|||||||.+++||++|++.+.|.++... .+|.++|||++|+|+++|++|++|++||+|....  
T Consensus        41 ~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~-~~p~i~G~E~~G~V~~vG~~v~~~~vGdrV~~~~--  117 (353)
T 4dup_A           41 DVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPK-DASPILGLELSGEIVGVGPGVSGYAVGDKVCGLA--  117 (353)
T ss_dssp             GGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSCCCT-TSCSSSCCEEEEEEEEECTTCCSCCTTCEEEEEC--
T ss_pred             cceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCC-CCCCccccccEEEEEEECCCCCCCCCCCEEEEec--
Confidence            3489999999999999999999999999999999999876543 6789999999999999999999999999996532  


Q ss_pred             CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcccc
Q 017457           87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC  166 (371)
Q Consensus        87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~  166 (371)
                                                  .+                   |+|+||++++++.++++|+++++++||++++
T Consensus       118 ----------------------------~~-------------------G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~  150 (353)
T 4dup_A          118 ----------------------------NG-------------------GAYAEYCLLPAGQILPFPKGYDAVKAAALPE  150 (353)
T ss_dssp             ----------------------------SS-------------------CCSBSEEEEEGGGEEECCTTCCHHHHHTSHH
T ss_pred             ----------------------------CC-------------------CceeeEEEEcHHHcEeCCCCCCHHHHhhhhh
Confidence                                        22                   4999999999999999999999999999999


Q ss_pred             chhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHH
Q 017457          167 GVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQ  245 (371)
Q Consensus       167 ~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~  245 (371)
                      +++|||+++.+.+++++|++|||+|+ |++|++++|+|+++|+ +|+++++++++++.++++|++.++++.+   .++.+
T Consensus       151 ~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~~~~~---~~~~~  226 (353)
T 4dup_A          151 TFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERLGAKRGINYRS---EDFAA  226 (353)
T ss_dssp             HHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEETTT---SCHHH
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEeCCc---hHHHH
Confidence            99999998878899999999999965 9999999999999999 9999999999999999999999999887   78999


Q ss_pred             HHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCch------
Q 017457          246 VIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPR------  318 (371)
Q Consensus       246 ~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~------  318 (371)
                      .+++.+++++|++|||+|+.. ++.++++++++ |+++.+|.........++...++. ++++.|+.+..+...      
T Consensus       227 ~~~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~  304 (353)
T 4dup_A          227 VIKAETGQGVDIILDMIGAAY-FERNIASLAKD-GCLSIIAFLGGAVAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIR  304 (353)
T ss_dssp             HHHHHHSSCEEEEEESCCGGG-HHHHHHTEEEE-EEEEECCCTTCSEEEEEECHHHHHTTCEEEECCSTTSCHHHHHHHH
T ss_pred             HHHHHhCCCceEEEECCCHHH-HHHHHHHhccC-CEEEEEEecCCCcccCCCHHHHHhcCceEEEEeccccchhhhHHHH
Confidence            999999449999999999876 89999999998 999999974433222255555554 899999876655421      


Q ss_pred             -hhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEe
Q 017457          319 -SDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM  367 (371)
Q Consensus       319 -~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~  367 (371)
                       +.++++++++++|++.  ++++++|+++++++||+.+.+++.. |+++++
T Consensus       305 ~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~l~~~~~~gKvvl~~  353 (353)
T 4dup_A          305 DDLLSEVWPLLEAGTVA--PVIHKVFAFEDVADAHRLLEEGSHVGKVMLTV  353 (353)
T ss_dssp             HHHHHHTHHHHHHTSSC--CCEEEEEEGGGHHHHHHHHHHTCCSSEEEEEC
T ss_pred             HHHHHHHHHHHHCCCcc--CCcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence             1167899999999764  5688999999999999999988765 999874

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=1.1e-48  Score=365.21  Aligned_cols=300  Identities=21%  Similarity=0.249  Sum_probs=262.6

Q ss_pred             CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457            8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD   87 (371)
Q Consensus         8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~   87 (371)
                      .+++++.|.|+|++|||||||.+++||++|++++.|.++.   .+|.++|||++|+|+++|+++++|++||+|++..   
T Consensus        22 ~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~---~~P~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~---   95 (334)
T 3qwb_A           22 VIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYPC---EKPYVLGREASGTVVAKGKGVTNFEVGDQVAYIS---   95 (334)
T ss_dssp             GEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHHTSSCC---CSSEECCSEEEEEEEEECTTCCSCCTTCEEEEEC---
T ss_pred             eeEEEeccCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC---CCCCccccceEEEEEEECCCCCCCCCCCEEEEee---
Confidence            3889999999999999999999999999999999987653   5899999999999999999999999999996632   


Q ss_pred             CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeee-cceeEECCCCCCcch---hhc
Q 017457           88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVD-ITHVVKITPHIPLGI---ACL  163 (371)
Q Consensus        88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~-~~~~~~~P~~l~~~~---aa~  163 (371)
                                                  +                   |+|+||++++ ++.++++|+++++++   +++
T Consensus        96 ----------------------------~-------------------G~~aey~~v~~~~~~~~~P~~~~~~~~~~aa~  128 (334)
T 3qwb_A           96 ----------------------------N-------------------STFAQYSKISSQGPVMKLPKGTSDEELKLYAA  128 (334)
T ss_dssp             ----------------------------S-------------------SCSBSEEEEETTSSEEECCTTCCHHHHHHHHH
T ss_pred             ----------------------------C-------------------CcceEEEEecCcceEEECCCCCCHHHhhhhhh
Confidence                                        1                   4999999999 999999999999999   888


Q ss_pred             cccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457          164 LSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT  242 (371)
Q Consensus       164 ~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~  242 (371)
                      +++.++|||+++.+..++++|++|||+|+ |++|++++|+|+++|+ +|+++++++++++.++++|+++++++.+   .+
T Consensus       129 ~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~~~~~---~~  204 (334)
T 3qwb_A          129 GLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAKEYGAEYLINASK---ED  204 (334)
T ss_dssp             HHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTT---SC
T ss_pred             hhhHHHHHHHHHHHhccCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEEEeCCC---ch
Confidence            88899999998877789999999999995 9999999999999999 9999999999999999999999999887   78


Q ss_pred             HHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCC-chh
Q 017457          243 VSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLK-PRS  319 (371)
Q Consensus       243 ~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~-~~~  319 (371)
                      +.+.+.+++++ ++|++||++|+.. ++.++++++++ |+++.+|... .....++...+.. ++++.++.+..+. ..+
T Consensus       205 ~~~~~~~~~~~~g~D~vid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (334)
T 3qwb_A          205 ILRQVLKFTNGKGVDASFDSVGKDT-FEISLAALKRK-GVFVSFGNAS-GLIPPFSITRLSPKNITLVRPQLYGYIADPE  281 (334)
T ss_dssp             HHHHHHHHTTTSCEEEEEECCGGGG-HHHHHHHEEEE-EEEEECCCTT-CCCCCBCGGGGTTTTCEEECCCGGGGSCSHH
T ss_pred             HHHHHHHHhCCCCceEEEECCChHH-HHHHHHHhccC-CEEEEEcCCC-CCCCCcchhhhhhCceEEEEEEeccccCCHH
Confidence            99999999987 9999999999865 99999999998 9999999743 2233455555555 7888887554432 222


Q ss_pred             ----hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEeCc
Q 017457          320 ----DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDK  369 (371)
Q Consensus       320 ----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~~~  369 (371)
                          .++++++++++|++.+.  ++++|+++++++||+.+.+++.. |+++++++
T Consensus       282 ~~~~~~~~~~~l~~~g~l~~~--i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~q  334 (334)
T 3qwb_A          282 EWKYYSDEFFGLVNSKKLNIK--IYKTYPLRDYRTAAADIESRKTVGKLVLEIPQ  334 (334)
T ss_dssp             HHHHHHHHHHHHHHTTSSCCC--EEEEEEGGGHHHHHHHHHTTCCCBEEEEECCC
T ss_pred             HHHHHHHHHHHHHHCCCccCc--eeeEEcHHHHHHHHHHHHhCCCceEEEEecCC
Confidence                34789999999988765  78999999999999999988765 99999864

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=4.5e-49  Score=368.78  Aligned_cols=301  Identities=22%  Similarity=0.253  Sum_probs=259.4

Q ss_pred             cEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCCC
Q 017457            9 LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDC   88 (371)
Q Consensus         9 l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~   88 (371)
                      ++++++|.|+|++|||+|||++++||++|++.+.|.++... .+|.++|||++|+|+++|++|++|++||+|+...    
T Consensus        20 l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~-~~p~i~G~E~~G~V~~vG~~v~~~~vGdrV~~~~----   94 (340)
T 3gms_A           20 LQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRI-PLPNIPGYEGVGIVENVGAFVSRELIGKRVLPLR----   94 (340)
T ss_dssp             EEEEEEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTTTTS-CSSBCCCSCCEEEEEEECTTSCGGGTTCEEEECS----
T ss_pred             EEEEecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCCCCC-CCCCcCCcceEEEEEEeCCCCCCCCCCCEEEecC----
Confidence            89999999999999999999999999999999999876432 7899999999999999999999999999996431    


Q ss_pred             CCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccch
Q 017457           89 GECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGV  168 (371)
Q Consensus        89 ~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~~  168 (371)
                                                .+                   |+|+||++++++.++++|+++++++||++++.+
T Consensus        95 --------------------------~~-------------------G~~aey~~v~~~~~~~vP~~l~~~~aa~l~~~~  129 (340)
T 3gms_A           95 --------------------------GE-------------------GTWQEYVKTSADFVVPIPDSIDDFTAAQMYINP  129 (340)
T ss_dssp             --------------------------SS-------------------CSSBSEEEEEGGGEEECCTTSCHHHHTTSSHHH
T ss_pred             --------------------------CC-------------------ccceeEEEcCHHHeEECCCCCCHHHHhhhcchH
Confidence                                      12                   499999999999999999999999999999999


Q ss_pred             hhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHH
Q 017457          169 STGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVI  247 (371)
Q Consensus       169 ~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i  247 (371)
                      +|||+++.+.+++++|++|||+|+ |++|++++|+|+++|+ +|+++++++++++.++++|+++++|+.+   .++.+.+
T Consensus       130 ~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lga~~~~~~~~---~~~~~~~  205 (340)
T 3gms_A          130 LTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRLGAAYVIDTST---APLYETV  205 (340)
T ss_dssp             HHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEETTT---SCHHHHH
T ss_pred             HHHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhCCCcEEEeCCc---ccHHHHH
Confidence            999999888899999999999998 6999999999999999 9999999999999999999999999887   7899999


Q ss_pred             HHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc--CceEEEeeccCC-------Cc
Q 017457          248 KEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK--GRSVCGTYFGGL-------KP  317 (371)
Q Consensus       248 ~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~-------~~  317 (371)
                      .+++++ ++|++|||+|+.. ...++++++++ |+++.+|.... .  .++...+..  ++++....+..+       ..
T Consensus       206 ~~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (340)
T 3gms_A          206 MELTNGIGADAAIDSIGGPD-GNELAFSLRPN-GHFLTIGLLSG-I--QVNWAEIVTKAKVHANIFHLRHWNDEVSPYKW  280 (340)
T ss_dssp             HHHTTTSCEEEEEESSCHHH-HHHHHHTEEEE-EEEEECCCTTS-C--CCCHHHHHHTSCCEEEECCHHHHHHHSCHHHH
T ss_pred             HHHhCCCCCcEEEECCCChh-HHHHHHHhcCC-CEEEEEeecCC-C--CCCHHHhhhcccceEEEEEehhhhhhcCHHHH
Confidence            999988 9999999999988 66777999998 99999997432 2  333333332  444444432211       11


Q ss_pred             hhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCc-e-eeEEEEeCc
Q 017457          318 RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGK-S-LRCIIWMDK  369 (371)
Q Consensus       318 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~-~kvvv~~~~  369 (371)
                      .++++++++++++|++.+.. ++++|+++++++||+.+.+++ . +|+++.+.+
T Consensus       281 ~~~~~~~~~l~~~g~l~~~~-i~~~~~l~~~~~A~~~~~~~~~~~GKvvl~~~~  333 (340)
T 3gms_A          281 QETFRHLIRLVENEQLRFMK-VHSTYELADVKAAVDVVQSAEKTKGKVFLTSYE  333 (340)
T ss_dssp             HHHHHHHHHHHHTTSSCCCC-EEEEEEGGGHHHHHHHHHCTTCCSSEEEEECC-
T ss_pred             HHHHHHHHHHHHcCCCcccc-ccEEEeHHHHHHHHHHHHhcCCCCCeEEEEEec
Confidence            35788999999999988765 679999999999999999986 4 699999865

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=2.4e-48  Score=367.81  Aligned_cols=315  Identities=17%  Similarity=0.196  Sum_probs=257.2

Q ss_pred             ccCCCCcEEE-EEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEe
Q 017457            3 RIPGKPLVIE-EIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVL   81 (371)
Q Consensus         3 ~~~~~~l~~~-~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~   81 (371)
                      +....+++++ ++|.|+|++|||||||.+++||++|++++.+.   .  .+|.++|||++|+|+++|++|++|++||+|.
T Consensus        17 ~~~~~~l~~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~---~--~~p~v~G~e~~G~V~~vG~~v~~~~~GdrV~   91 (371)
T 3gqv_A           17 VNDHDEVTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQF---A--TPWAFLGTDYAGTVVAVGSDVTHIQVGDRVY   91 (371)
T ss_dssp             ECTTSCEEEEEEECCCCCCTTSEEEEEEEEECCGGGGC--------C--CTTSCCCSEEEEEEEEECTTCCSCCTTCEEE
T ss_pred             EcCCCceEEeccCCCCCCCCCEEEEEEEEEEcCHHHHHHhhcC---C--CCCccCccccEEEEEEeCCCCCCCCCCCEEE
Confidence            3444569998 99999999999999999999999999988763   2  5688999999999999999999999999995


Q ss_pred             eccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchh
Q 017457           82 PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA  161 (371)
Q Consensus        82 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~a  161 (371)
                      .       .|..|..+               ...+                   |+|+||++++++.++++|+++++++|
T Consensus        92 ~-------~~~~~~~~---------------~~~~-------------------G~~aey~~v~~~~~~~~P~~~~~~~a  130 (371)
T 3gqv_A           92 G-------AQNEMCPR---------------TPDQ-------------------GAFSQYTVTRGRVWAKIPKGLSFEQA  130 (371)
T ss_dssp             E-------ECCTTCTT---------------CTTC-------------------CSSBSEEECCTTCEEECCTTCCHHHH
T ss_pred             E-------eccCCCCC---------------CCCC-------------------CcCcCeEEEchhheEECCCCCCHHHH
Confidence            4       45555432               1223                   49999999999999999999999999


Q ss_pred             hccccchhhhHHHHHHH-cCC-----------CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhC
Q 017457          162 CLLSCGVSTGVGAAWKV-AGV-----------EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG  228 (371)
Q Consensus       162 a~~~~~~~ta~~~l~~~-~~~-----------~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lg  228 (371)
                      |.+++++.|||+++.+. .++           ++|++|||+|+ |++|++++|+|+++|+ +|+++. +++|+++++++|
T Consensus       131 a~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~~~-~~~~~~~~~~lG  208 (371)
T 3gqv_A          131 AALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATC-SPHNFDLAKSRG  208 (371)
T ss_dssp             HTSHHHHHHHHHHHHHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHHTT
T ss_pred             hhhhhhHHHHHHHHHhhccCCCCCccccccccCCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe-CHHHHHHHHHcC
Confidence            99999999999988776 553           89999999998 9999999999999999 899887 789999999999


Q ss_pred             cceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHh-hcCCceEEEECccCC----CCcee--cC-HHH
Q 017457          229 ITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSS-REGWGKTVILGVEMH----GSPIS--LN-SIE  300 (371)
Q Consensus       229 a~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l-~~~~G~~v~~g~~~~----~~~~~--~~-~~~  300 (371)
                      +++++|+++   .++.+.+++++++++|+|||++|++..++.+++++ +++ |+++.+|....    .....  +. ...
T Consensus       209 a~~vi~~~~---~~~~~~v~~~t~g~~d~v~d~~g~~~~~~~~~~~l~~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~  284 (371)
T 3gqv_A          209 AEEVFDYRA---PNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAG-GHYVSLNPFPEHAATRKMVTTDWTLGPT  284 (371)
T ss_dssp             CSEEEETTS---TTHHHHHHHHTTTCCCEEEESSCSHHHHHHHHHHSCTTC-EEEEESSCCCC---CCSCEEEEECCGGG
T ss_pred             CcEEEECCC---chHHHHHHHHccCCccEEEECCCchHHHHHHHHHhhcCC-CEEEEEecCccccccccccceeeeeeee
Confidence            999999988   88999999999889999999999977799999999 587 99999996432    11122  11 223


Q ss_pred             Hh-cCceEEEeeccCCCc------hhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCce-e-eEEEEeCc
Q 017457          301 IL-KGRSVCGTYFGGLKP------RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS-L-RCIIWMDK  369 (371)
Q Consensus       301 ~~-~~~~~~g~~~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~-kvvv~~~~  369 (371)
                      ++ +++++.|+.......      .+.++++++++++|++.+...++++|+++++++||+.+.+++. + |+++.+++
T Consensus       285 ~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~l~~~~~A~~~l~~g~~~Gkkvvv~~~~  362 (371)
T 3gqv_A          285 IFGEGSTWPAPYGRPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVVRLEG  362 (371)
T ss_dssp             GGTSCBSCSTTTCBCCCHHHHHHHHHHHHHHHHHHHTTSSCCCCEEEEEECHHHHHHHHHHHHTTCCSSCEEEEEECC
T ss_pred             eccccccccccccccccHHHHHHHHHHHHHHHHHHHCCeeeCCcCeecCCcHHHHHHHHHHHHcCCCceEEEEEEeCC
Confidence            33 377777764332221      1223578899999999998888888999999999999998765 4 78888765

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=1.8e-48  Score=362.39  Aligned_cols=301  Identities=21%  Similarity=0.211  Sum_probs=259.6

Q ss_pred             CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457            8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD   87 (371)
Q Consensus         8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~   87 (371)
                      .+++++.|.|+|++|||+|||.+++||++|++++.|.++..  .+|.++|||++|+|+++|+++++|++||+|+....  
T Consensus        15 ~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~p~v~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~--   90 (325)
T 3jyn_A           15 VLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAP--FLPSGLGAEGAGVVEAVGDEVTRFKVGDRVAYGTG--   90 (325)
T ss_dssp             GCEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCS--SSSBCCCCCEEEEEEEECTTCCSCCTTCEEEESSS--
T ss_pred             eeEEeecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCC--CCCCCCCceeEEEEEEECCCCCCCCCCCEEEEecC--
Confidence            48999999999999999999999999999999999987764  78999999999999999999999999999966321  


Q ss_pred             CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccc
Q 017457           88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG  167 (371)
Q Consensus        88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~  167 (371)
                                                 .+                   |+|+||+.++++.++++|+++++++||++++.
T Consensus        91 ---------------------------~~-------------------G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~  124 (325)
T 3jyn_A           91 ---------------------------PL-------------------GAYSEVHVLPEANLVKLADSVSFEQAAALMLK  124 (325)
T ss_dssp             ---------------------------SS-------------------CCSBSEEEEEGGGEEECCTTSCHHHHHHHHHH
T ss_pred             ---------------------------CC-------------------ccccceEEecHHHeEECCCCCCHHHHhhhhhh
Confidence                                       12                   49999999999999999999999999999999


Q ss_pred             hhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHH
Q 017457          168 VSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV  246 (371)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~  246 (371)
                      ++|||+++.+.+++++|++|||+|+ |++|++++|+|+++|+ +|+++++++++++.++++|+++++|+.+   .++.+.
T Consensus       125 ~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~---~~~~~~  200 (325)
T 3jyn_A          125 GLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKALGAWETIDYSH---EDVAKR  200 (325)
T ss_dssp             HHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEETTT---SCHHHH
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCC---ccHHHH
Confidence            9999998888889999999999995 9999999999999999 9999999999999999999999999887   789999


Q ss_pred             HHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc--CceEEEeeccCCC-ch----
Q 017457          247 IKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK--GRSVCGTYFGGLK-PR----  318 (371)
Q Consensus       247 i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~-~~----  318 (371)
                      +.+++++ ++|++||++|+.. +..++++++++ |+++.+|.... ....++...+..  .+.+.+..+..+. ..    
T Consensus       201 ~~~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (325)
T 3jyn_A          201 VLELTDGKKCPVVYDGVGQDT-WLTSLDSVAPR-GLVVSFGNASG-PVSGVNLGILAQKDSVYVTRPTLGSYANNAQNLQ  277 (325)
T ss_dssp             HHHHTTTCCEEEEEESSCGGG-HHHHHTTEEEE-EEEEECCCTTC-CCCSCCTHHHHHTTSCEEECCCHHHHSCSTTHHH
T ss_pred             HHHHhCCCCceEEEECCChHH-HHHHHHHhcCC-CEEEEEecCCC-CCCCCCHHHHhhcCcEEEEeeeeeeecCCHHHHH
Confidence            9999988 9999999999966 89999999998 99999997543 223455554444  3455544322211 12    


Q ss_pred             hhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEe
Q 017457          319 SDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM  367 (371)
Q Consensus       319 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~  367 (371)
                      +.++++++++++|++.+.  ++++|+++++++||+.+.+++.. |+++.+
T Consensus       278 ~~~~~~~~l~~~g~l~~~--i~~~~~l~~~~~A~~~~~~~~~~Gkvvl~p  325 (325)
T 3jyn_A          278 TMADELFDMLASGKLKVD--GIEQYALKDAAKAQIELSARRTTGSTILIP  325 (325)
T ss_dssp             HHHHHHHHHHHTTSSCCC--CCEEEEGGGHHHHHHHHHTTCCCSCEEEEC
T ss_pred             HHHHHHHHHHHCCCeeCc--cccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            234589999999988765  67999999999999999998776 998863

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=9.3e-49  Score=366.76  Aligned_cols=299  Identities=20%  Similarity=0.265  Sum_probs=254.0

Q ss_pred             CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCC
Q 017457            7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHR   86 (371)
Q Consensus         7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~   86 (371)
                      +.++++++|.|+|++|||||||.+++||++|++++.|.++... .+|.++|||++|+|+++|++++ |++||+|++..  
T Consensus        34 ~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~-~~p~v~G~E~~G~V~~vG~~v~-~~vGDrV~~~~--  109 (342)
T 4eye_A           34 EGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKM-EPPFVPGIETAGVVRSAPEGSG-IKPGDRVMAFN--  109 (342)
T ss_dssp             GGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSSSCC-CSSBCCCSEEEEEEEECCTTSS-CCTTCEEEEEC--
T ss_pred             ceeEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCC-CCCCccceeEEEEEEEECCCCC-CCCCCEEEEec--
Confidence            3489999999999999999999999999999999999875432 7899999999999999999999 99999996642  


Q ss_pred             CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcccc
Q 017457           87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC  166 (371)
Q Consensus        87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~  166 (371)
                                                  .+                   |+|+||++++++.++++|+++++++||++++
T Consensus       110 ----------------------------~~-------------------G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~  142 (342)
T 4eye_A          110 ----------------------------FI-------------------GGYAERVAVAPSNILPTPPQLDDAEAVALIA  142 (342)
T ss_dssp             ----------------------------SS-------------------CCSBSEEEECGGGEEECCTTSCHHHHHHHTT
T ss_pred             ----------------------------CC-------------------CcceEEEEEcHHHeEECCCCCCHHHHHHhhh
Confidence                                        12                   4999999999999999999999999999999


Q ss_pred             chhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHH
Q 017457          167 GVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQ  245 (371)
Q Consensus       167 ~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~  245 (371)
                      +++|||+++.+.+++++|++|||+|+ |++|++++|+|+++|+ +|+++++++++++.++++|+++++++++    ++.+
T Consensus       143 ~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~v~~~~~----~~~~  217 (342)
T 4eye_A          143 NYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSVGADIVLPLEE----GWAK  217 (342)
T ss_dssp             HHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEESST----THHH
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEecCch----hHHH
Confidence            99999998878899999999999998 9999999999999999 9999999999999999999999998764    7888


Q ss_pred             HHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCC------c
Q 017457          246 VIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLK------P  317 (371)
Q Consensus       246 ~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~------~  317 (371)
                      .+++.+++ ++|++|||+|++. +..++++++++ |+++.+|..... ...++...++. ++++.|+....+.      .
T Consensus       218 ~v~~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~  294 (342)
T 4eye_A          218 AVREATGGAGVDMVVDPIGGPA-FDDAVRTLASE-GRLLVVGFAAGG-IPTIKVNRLLLRNASLIGVAWGEFLRTHADYL  294 (342)
T ss_dssp             HHHHHTTTSCEEEEEESCC--C-HHHHHHTEEEE-EEEEEC-----------CCCCGGGTTCEEEECCHHHHHHHCTTHH
T ss_pred             HHHHHhCCCCceEEEECCchhH-HHHHHHhhcCC-CEEEEEEccCCC-CCccCHHHHhhcCCEEEEEehhhhhhcCHHHH
Confidence            99999988 9999999999876 89999999998 999999964322 22334333444 8999998654321      1


Q ss_pred             hhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEe
Q 017457          318 RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM  367 (371)
Q Consensus       318 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~  367 (371)
                      .++++++++++++|   +.++++++|+++++++||+.+.+++.. |+++..
T Consensus       295 ~~~~~~~~~l~~~g---l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~P  342 (342)
T 4eye_A          295 YETQAGLEKLVAEG---MRPPVSARIPLSEGRQALQDFADGKVYGKMVLVP  342 (342)
T ss_dssp             HHHHHHHHHHHHTT---CCCCEEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHHHHHHHHHHHcC---CCCCcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            24688899999999   455688999999999999999998775 998863

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=7.5e-48  Score=361.24  Aligned_cols=303  Identities=20%  Similarity=0.233  Sum_probs=257.5

Q ss_pred             CCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeecc
Q 017457            5 PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIF   84 (371)
Q Consensus         5 ~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~   84 (371)
                      +.+.++++++|.|+|++|||||||++++||++|++.+.|.  ..  .+|.++|||++|+|+++|++|++|++||+|+...
T Consensus        16 ~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~--~~--~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~   91 (346)
T 3fbg_A           16 DGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMD--VS--KAPRVLGFDAIGVVESVGNEVTMFNQGDIVYYSG   91 (346)
T ss_dssp             GCCCCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHTTSC--CS--SSCBCCCCCEEEEEEEECTTCCSCCTTCEEEECC
T ss_pred             CCceeEeccccCCCCCCCEEEEEEEEEEcCHHHHHHHhCC--CC--CCCcCcCCccEEEEEEeCCCCCcCCCCCEEEEcC
Confidence            3467999999999999999999999999999999998886  22  6899999999999999999999999999997632


Q ss_pred             CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcc
Q 017457           85 HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLL  164 (371)
Q Consensus        85 ~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~  164 (371)
                      .                           ...+                   |+|+||++++++.++++|+++++++||++
T Consensus        92 ~---------------------------~~~~-------------------G~~aey~~v~~~~~~~iP~~~~~~~aa~~  125 (346)
T 3fbg_A           92 S---------------------------PDQN-------------------GSNAEYQLINERLVAKAPKNISAEQAVSL  125 (346)
T ss_dssp             C---------------------------TTSC-------------------CSSBSEEEEEGGGEEECCSSSCHHHHTTS
T ss_pred             C---------------------------CCCC-------------------cceeEEEEEChHHeEECCCCCCHHHhhhc
Confidence            1                           1122                   49999999999999999999999999999


Q ss_pred             ccchhhhHHHHHHHcCCC------CCCeEEEEc-CChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCC
Q 017457          165 SCGVSTGVGAAWKVAGVE------VGSTVAIFG-LGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPAT  237 (371)
Q Consensus       165 ~~~~~ta~~~l~~~~~~~------~g~~VLI~G-~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~  237 (371)
                      ++++.|||+++.+..+++      +|++|||+| +|++|++++|+|+++|+ +|++++++++++++++++|+++++++++
T Consensus       126 ~~~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~  204 (346)
T 3fbg_A          126 PLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKKMGADIVLNHKE  204 (346)
T ss_dssp             HHHHHHHHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHHHHHTCSEEECTTS
T ss_pred             chhHHHHHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEECCc
Confidence            999999999988888888      999999996 59999999999999999 9999999999999999999999999865


Q ss_pred             CCCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCC-
Q 017457          238 CGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGL-  315 (371)
Q Consensus       238 ~~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~-  315 (371)
                          ++.+.+++..++++|++|||+|+...++.++++++++ |+++.++..    ...++...+.. ++++.++.+... 
T Consensus       205 ----~~~~~~~~~~~~g~Dvv~d~~g~~~~~~~~~~~l~~~-G~iv~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  275 (346)
T 3fbg_A          205 ----SLLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPR-GHIATIVAF----ENDQDLNALKPKSLSFSHEFMFARP  275 (346)
T ss_dssp             ----CHHHHHHHHTCCCEEEEEESSCHHHHHHHHHHHEEEE-EEEEESSCC----SSCBCGGGGTTTTCEEEECCTTHHH
T ss_pred             ----cHHHHHHHhCCCCccEEEECCCchHHHHHHHHHhccC-CEEEEECCC----CCCCccccccccceEEEEEEEeccc
Confidence                6888888884449999999999888789999999998 999988742    12344445544 788888653321 


Q ss_pred             --C------chhhHHHHHHHHHcCCCCCCCceeEEE---ecccHHHHHHHHhcCcee-eEEEEeCc
Q 017457          316 --K------PRSDIATLAQKYLDKELNLGEFITHEV---SFHDINKAFDLLLEGKSL-RCIIWMDK  369 (371)
Q Consensus       316 --~------~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~a~~~~~~~~~~-kvvv~~~~  369 (371)
                        .      ..+.++++++++++|++.  +.++++|   +++++++||+.+.+++.. |+++.+++
T Consensus       276 ~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~~~~l~~~~~A~~~~~~g~~~GKvvl~~~~  339 (346)
T 3fbg_A          276 LNQTDDMIKHHEYLEDITNKVEQNIYQ--PTTTKVIEGLTTENIYQAHQILESNTMIGKLVINLNE  339 (346)
T ss_dssp             HTTCTTTHHHHHHHHHHHHHHHTTSSC--CCEEEEEESCCHHHHHHHHHHHHTTCCCSEEEEEC--
T ss_pred             ccchhhHHHHHHHHHHHHHHHHCCCEE--CCccceecCCCHHHHHHHHHHHhcCCcceEEEEecCC
Confidence              0      125678899999999765  4477777   899999999999998866 99999864

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=6.8e-48  Score=363.55  Aligned_cols=304  Identities=17%  Similarity=0.181  Sum_probs=259.0

Q ss_pred             CCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccC
Q 017457            6 GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH   85 (371)
Q Consensus         6 ~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~   85 (371)
                      ...++++++|.|+|++|||+|||.+++||++|++++.|.++..  .+|.++|||++|+|+++|++|++|++||+|+... 
T Consensus        37 ~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~-  113 (363)
T 4dvj_A           37 DASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDG--TDWKVIGYDAAGIVSAVGPDVTLFRPGDEVFYAG-  113 (363)
T ss_dssp             TTSSEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCCC----CCSBCCCCCEEEEEEEECTTCCSCCTTCEEEECC-
T ss_pred             CceEEEeecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCCCCCC--CCCCcccceeEEEEEEeCCCCCCCCCCCEEEEcc-
Confidence            4569999999999999999999999999999999999987655  7899999999999999999999999999997632 


Q ss_pred             CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccc
Q 017457           86 RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLS  165 (371)
Q Consensus        86 ~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~  165 (371)
                                                +...+                   |+|+||++++++.++++|+++|+++||+++
T Consensus       114 --------------------------~~~~~-------------------G~~aey~~v~~~~~~~iP~~~~~~~aa~l~  148 (363)
T 4dvj_A          114 --------------------------SIIRP-------------------GTNAEFHLVDERIVGRKPKTLDWAEAAALP  148 (363)
T ss_dssp             --------------------------CTTSC-------------------CSCBSEEEEEGGGCEECCTTSCHHHHHTSH
T ss_pred             --------------------------CCCCC-------------------ccceEEEEeCHHHeeECCCCCCHHHHHhhh
Confidence                                      11223                   499999999999999999999999999999


Q ss_pred             cchhhhHHHHHHHcCCC-----CCCeEEEEcC-ChHHHHHHHHHHH-cCCCeEEEEcCChhHHHHHHHhCcceEEcCCCC
Q 017457          166 CGVSTGVGAAWKVAGVE-----VGSTVAIFGL-GAVGLAVAEGARL-NRASKIIGVDINPEKFEIGKKFGITDFINPATC  238 (371)
Q Consensus       166 ~~~~ta~~~l~~~~~~~-----~g~~VLI~G~-g~~G~~ai~la~~-~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~  238 (371)
                      ++++|||+++.+..+++     +|++|||+|+ |++|++++|+||+ .|+ +|++++++++++++++++|+++++++.+ 
T Consensus       149 ~~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~-~Vi~~~~~~~~~~~~~~lGad~vi~~~~-  226 (363)
T 4dvj_A          149 LTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDL-TVIATASRPETQEWVKSLGAHHVIDHSK-  226 (363)
T ss_dssp             HHHHHHHHHHHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCS-EEEEECSSHHHHHHHHHTTCSEEECTTS-
T ss_pred             hHHHHHHHHHHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCC-
Confidence            99999999887888888     8999999995 9999999999998 478 9999999999999999999999999865 


Q ss_pred             CCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCC--
Q 017457          239 GDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGL--  315 (371)
Q Consensus       239 ~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~--  315 (371)
                         ++.+.++++.++++|+||||+|++..++.++++++++ |+++.+|..     ..++...+.. ++++.++.....  
T Consensus       227 ---~~~~~v~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~-----~~~~~~~~~~k~~~i~~~~~~~~~~  297 (363)
T 4dvj_A          227 ---PLAAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQ-GRFCLIDDP-----SAFDIMLFKRKAVSIHHELMFTRPM  297 (363)
T ss_dssp             ---CHHHHHHTTCSCCEEEEEECSCHHHHHHHHHHHSCTT-CEEEECSCC-----SSCCGGGGTTTTCEEEECCTTHHHH
T ss_pred             ---CHHHHHHHhcCCCceEEEECCCchhhHHHHHHHhcCC-CEEEEECCC-----CccchHHHhhccceEEEEEeecccc
Confidence               6888888885559999999999886689999999998 999999642     2344444544 788888653321  


Q ss_pred             ---Cc----hhhHHHHHHHHHcCCCCCCCceeEEE---ecccHHHHHHHHhcCcee-eEEEEeCcC
Q 017457          316 ---KP----RSDIATLAQKYLDKELNLGEFITHEV---SFHDINKAFDLLLEGKSL-RCIIWMDKL  370 (371)
Q Consensus       316 ---~~----~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~a~~~~~~~~~~-kvvv~~~~~  370 (371)
                         ..    .+.++++++++++|++.+  .+++++   +++++++||+.+.+++.. |+++++..|
T Consensus       298 ~~~~~~~~~~~~~~~~~~l~~~g~l~~--~i~~~~~~~~l~~~~~A~~~~~~~~~~GKvVl~~~~~  361 (363)
T 4dvj_A          298 FGTPDMSEQGRLLNDVSRLVDEGRLRT--TLTNRLSPINAANLKQAHALVESGTARGKVVIEGFGL  361 (363)
T ss_dssp             HTCTTTHHHHHHHHHHHHHHHHTSSCC--CEEEEECSCSHHHHHHHHHHHHHTCCCSEEEEECSCC
T ss_pred             ccCcchhhHHHHHHHHHHHHHCCCeec--cccceecCCCHHHHHHHHHHHHhCCCceEEEEeCccc
Confidence               11    356789999999997764  466666   999999999999998765 999998765

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=5.6e-48  Score=361.62  Aligned_cols=304  Identities=19%  Similarity=0.243  Sum_probs=257.6

Q ss_pred             cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457            4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI   83 (371)
Q Consensus         4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~   83 (371)
                      .++.+++++++|.|+|++|||||||.+++||++|++++.|..+.....+|.++|||++|+|+++|+++++|++||+|+.+
T Consensus        15 ~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~   94 (343)
T 3gaz_A           15 EANGPFVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDLAGTVVAVGPEVDSFRVGDAVFGL   94 (343)
T ss_dssp             STTCCEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCGGGCCCSSBCCCCEEEEEEEEECTTCCSCCTTCEEEEE
T ss_pred             cCCCceEEEeccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCCCCCCCCCcccCcceEEEEEEECCCCCCCCCCCEEEEE
Confidence            44555999999999999999999999999999999999887533222789999999999999999999999999999764


Q ss_pred             cCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhh
Q 017457           84 FHRDCGECRDCKSSKSNTCSKFGRGYRPNMP-RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC  162 (371)
Q Consensus        84 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa  162 (371)
                      ..                          |.. .+                   |+|+||++++++.++++|+++++++||
T Consensus        95 ~~--------------------------g~~~~~-------------------G~~aey~~v~~~~~~~~P~~~~~~~aa  129 (343)
T 3gaz_A           95 TG--------------------------GVGGLQ-------------------GTHAQFAAVDARLLASKPAALTMRQAS  129 (343)
T ss_dssp             CC--------------------------SSTTCC-------------------CSSBSEEEEEGGGEEECCTTSCHHHHH
T ss_pred             eC--------------------------CCCCCC-------------------cceeeEEEecHHHeeeCCCCCCHHHHH
Confidence            32                          111 22                   499999999999999999999999999


Q ss_pred             ccccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCc
Q 017457          163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK  241 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~  241 (371)
                      .++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+++|+ +|+++ .++++++.++++|++. ++ .+   .
T Consensus       130 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~lGa~~-i~-~~---~  202 (343)
T 3gaz_A          130 VLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRDLGATP-ID-AS---R  202 (343)
T ss_dssp             TSHHHHHHHHHHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHHHTSEE-EE-TT---S
T ss_pred             HhhhhHHHHHHHHHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHHcCCCE-ec-cC---C
Confidence            999999999998878899999999999995 9999999999999999 99999 7999999999999998 77 44   6


Q ss_pred             cHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHH-hcCceEEEeeccCC----
Q 017457          242 TVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFGGL----  315 (371)
Q Consensus       242 ~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~----  315 (371)
                      ++.+.+++.+++ ++|++||++|+.. +..++++++++ |+++.+|...     .++...+ .+++++.++.....    
T Consensus       203 ~~~~~~~~~~~~~g~D~vid~~g~~~-~~~~~~~l~~~-G~iv~~g~~~-----~~~~~~~~~~~~~~~g~~~~~~~~~~  275 (343)
T 3gaz_A          203 EPEDYAAEHTAGQGFDLVYDTLGGPV-LDASFSAVKRF-GHVVSCLGWG-----THKLAPLSFKQATYSGVFTLHTLLAN  275 (343)
T ss_dssp             CHHHHHHHHHTTSCEEEEEESSCTHH-HHHHHHHEEEE-EEEEESCCCS-----CCCCHHHHHTTCEEEECCTTHHHHHT
T ss_pred             CHHHHHHHHhcCCCceEEEECCCcHH-HHHHHHHHhcC-CeEEEEcccC-----ccccchhhhcCcEEEEEEeccchhcc
Confidence            888999999988 9999999999866 99999999998 9999998643     2233333 34889998753211    


Q ss_pred             -C---chhhHHHHHHHHHcCCCCCCCcee-EEEecccHHHHHHHHhcCce-----eeEEEEeC
Q 017457          316 -K---PRSDIATLAQKYLDKELNLGEFIT-HEVSFHDINKAFDLLLEGKS-----LRCIIWMD  368 (371)
Q Consensus       316 -~---~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~-----~kvvv~~~  368 (371)
                       .   ..++++++++++++|++.  +.++ ++|+++++++|++.+.+++.     +|++++..
T Consensus       276 ~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~~l~~~~~A~~~~~~~~~~Gr~~GK~v~~~~  336 (343)
T 3gaz_A          276 EGLAHFGEMLREADALVQTGKLA--PRLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAITVE  336 (343)
T ss_dssp             CSHHHHHHHHHHHHHHHHTTCCC--CCBCSCCEETTCHHHHHHHHHTCTTCCCCSSBCEEECC
T ss_pred             cchHHHHHHHHHHHHHHHCCCcc--cCccCcEecHHHHHHHHHHHHcCCCcccccceEEEEec
Confidence             0   125788999999999875  4576 79999999999999988654     48998865

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=7.7e-48  Score=362.19  Aligned_cols=305  Identities=18%  Similarity=0.226  Sum_probs=258.9

Q ss_pred             CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCC-CCcCCCCEEeeccCC
Q 017457            8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYV-EEVKERDLVLPIFHR   86 (371)
Q Consensus         8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v-~~~~~Gd~V~~~~~~   86 (371)
                      .+++++.|.|+|+++||+|||.+++||++|++++.|.++... .+|.++|||++|+|+++|++| ++|++||+|+...  
T Consensus        36 ~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~-~~p~v~G~E~~G~V~~vG~~v~~~~~vGdrV~~~~--  112 (354)
T 2j8z_A           36 NLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPP-GASNILGLEASGHVAELGPGCQGHWKIGDTAMALL--  112 (354)
T ss_dssp             GEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCCT-TSCSSSCSEEEEEEEEECSCC--CCCTTCEEEEEC--
T ss_pred             ceEEeecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCCCCC-CCCcccceeeEEEEEEECCCcCCCCCCCCEEEEec--
Confidence            488999999999999999999999999999999998765432 578999999999999999999 9999999996532  


Q ss_pred             CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcccc
Q 017457           87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC  166 (371)
Q Consensus        87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~  166 (371)
                                                  .+                   |+|+||++++++.++++|+++++++||++++
T Consensus       113 ----------------------------~~-------------------G~~aey~~v~~~~~~~iP~~ls~~~aa~l~~  145 (354)
T 2j8z_A          113 ----------------------------PG-------------------GGQAQYVTVPEGLLMPIPEGLTLTQAAAIPE  145 (354)
T ss_dssp             ----------------------------SS-------------------CCSBSEEEEEGGGEEECCTTCCHHHHTTSHH
T ss_pred             ----------------------------CC-------------------CcceeEEEeCHHHcEECCCCCCHHHHHhccc
Confidence                                        12                   4999999999999999999999999999999


Q ss_pred             chhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHH
Q 017457          167 GVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQ  245 (371)
Q Consensus       167 ~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~  245 (371)
                      +++|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.++++|++.++|+.+   .++.+
T Consensus       146 ~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~  221 (354)
T 2j8z_A          146 AWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEKLGAAAGFNYKK---EDFSE  221 (354)
T ss_dssp             HHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTCSEEEETTT---SCHHH
T ss_pred             hHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecCC---hHHHH
Confidence            99999998877889999999999996 9999999999999999 9999999999999999999999999877   78888


Q ss_pred             HHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCH-HHHhc-CceEEEeeccCCCch----
Q 017457          246 VIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNS-IEILK-GRSVCGTYFGGLKPR----  318 (371)
Q Consensus       246 ~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~-~~~~~g~~~~~~~~~----  318 (371)
                      .+.+.+++ ++|++||++|+.. +..++++++++ |+++.+|.... ....++. ..++. ++++.|+.+......    
T Consensus       222 ~~~~~~~~~~~d~vi~~~G~~~-~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~  298 (354)
T 2j8z_A          222 ATLKFTKGAGVNLILDCIGGSY-WEKNVNCLALD-GRWVLYGLMGG-GDINGPLFSKLLFKRGSLITSLLRSRDNKYKQM  298 (354)
T ss_dssp             HHHHHTTTSCEEEEEESSCGGG-HHHHHHHEEEE-EEEEECCCTTC-SCCCSCHHHHHHHTTCEEEECCSTTCCHHHHHH
T ss_pred             HHHHHhcCCCceEEEECCCchH-HHHHHHhccCC-CEEEEEeccCC-CccCCChhHHHHhCCCEEEEEEcccccccccHH
Confidence            99888877 8999999999985 89999999998 99999997432 2345665 55544 899999865543211    


Q ss_pred             --h-hHHHHHHHHHcC-CCCCCCceeEEEecccHHHHHHHHhcCce-eeEEEEeCc
Q 017457          319 --S-DIATLAQKYLDK-ELNLGEFITHEVSFHDINKAFDLLLEGKS-LRCIIWMDK  369 (371)
Q Consensus       319 --~-~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvv~~~~  369 (371)
                        . .++++++++++| ++.+.++++++|+|+++++||+.+.+++. +|+++.+++
T Consensus       299 ~~~~~~~~~~~l~~~g~~~~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~  354 (354)
T 2j8z_A          299 LVNAFTEQILPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLELPQ  354 (354)
T ss_dssp             HHHHHHHHTGGGGTC---CCCCCCEEEEEEGGGHHHHHHHHHTTCCSSEEEEECCC
T ss_pred             HHHHHHHHHHHHHHcCCCccccCccceEEcHHHHHHHHHHHHhCCCCceEEEecCC
Confidence              1 124578888899 44556678899999999999999988765 499998753

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=1.2e-48  Score=367.14  Aligned_cols=304  Identities=14%  Similarity=0.154  Sum_probs=253.3

Q ss_pred             CCCcEEEEE---------ecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCC-CCcC
Q 017457            6 GKPLVIEEI---------EVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYV-EEVK   75 (371)
Q Consensus         6 ~~~l~~~~~---------~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v-~~~~   75 (371)
                      .+.++++++         |.|+|++|||||||++++||++|++.+.|.++... .+|.++|||++|+|+++|++| ++|+
T Consensus        25 ~~~l~~~~~~~~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~-~~p~v~G~E~~G~V~~vG~~v~~~~~  103 (349)
T 3pi7_A           25 PSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPR-VKGRPAGFEGVGTIVAGGDEPYAKSL  103 (349)
T ss_dssp             CCCSCCCCSTTTEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSSCB-CTTSBCCSEEEEEEEEECSSHHHHHH
T ss_pred             cccceEEEeecccccccCCCCCCCCCeEEEEEEEecCCHHHHHHhcccCCCCC-CCCCCccceEEEEEEEECCCccCCCC
Confidence            344666666         99999999999999999999999999999775432 689999999999999999999 9999


Q ss_pred             CCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCC
Q 017457           76 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH  155 (371)
Q Consensus        76 ~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~  155 (371)
                      +||+|++..                           |...+                   |+|+||++++++.++++|++
T Consensus       104 vGdrV~~~~---------------------------g~~~~-------------------G~~aey~~v~~~~~~~iP~~  137 (349)
T 3pi7_A          104 VGKRVAFAT---------------------------GLSNW-------------------GSWAEYAVAEAAACIPLLDT  137 (349)
T ss_dssp             TTCEEEEEC---------------------------TTSSC-------------------CSSBSEEEEEGGGEEECCTT
T ss_pred             CCCEEEEec---------------------------cCCCC-------------------ccceeeEeechHHeEECCCC
Confidence            999997642                           22233                   49999999999999999999


Q ss_pred             CCcchhhccccchhhhHHHHHHHcCCCCC-CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEE
Q 017457          156 IPLGIACLLSCGVSTGVGAAWKVAGVEVG-STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI  233 (371)
Q Consensus       156 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g-~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~  233 (371)
                      +++++||++++.++|||+ +.+.++ ++| ++|||+|+ |++|++++|+|+++|+ +|++++++++++++++++|+++++
T Consensus       138 ~~~~~aa~l~~~~~ta~~-~~~~~~-~~g~~~vli~gg~g~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~  214 (349)
T 3pi7_A          138 VRDEDGAAMIVNPLTAIA-MFDIVK-QEGEKAFVMTAGASQLCKLIIGLAKEEGF-RPIVTVRRDEQIALLKDIGAAHVL  214 (349)
T ss_dssp             CCC--GGGSSHHHHHHHH-HHHHHH-HHCCSEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHTCSEEE
T ss_pred             CCHHHHhhccccHHHHHH-HHHHHh-hCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEE
Confidence            999999999999999996 556666 666 78899865 9999999999999999 999999999999999999999999


Q ss_pred             cCCCCCCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCH-HHHh-cCceEEEe
Q 017457          234 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNS-IEIL-KGRSVCGT  310 (371)
Q Consensus       234 ~~~~~~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~-~~~~~~g~  310 (371)
                      |+++   .++.+.+++++++ ++|++|||+|+.. +..++++++++ |+++.+|.... ....++. ..++ +++++.|+
T Consensus       215 ~~~~---~~~~~~v~~~~~~~g~D~vid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~~~i~g~  288 (349)
T 3pi7_A          215 NEKA---PDFEATLREVMKAEQPRIFLDAVTGPL-ASAIFNAMPKR-ARWIIYGRLDP-DATVIREPGQLIFQHKHIEGF  288 (349)
T ss_dssp             ETTS---TTHHHHHHHHHHHHCCCEEEESSCHHH-HHHHHHHSCTT-CEEEECCCSCC-SCCCCSCTHHHHHSCCEEEEC
T ss_pred             ECCc---HHHHHHHHHHhcCCCCcEEEECCCChh-HHHHHhhhcCC-CEEEEEeccCC-CCCCCCchhhhhccccEEEEE
Confidence            9887   7899999999987 9999999999887 78999999998 99999996433 2344554 4444 48999998


Q ss_pred             eccCCC------chhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEEe
Q 017457          311 YFGGLK------PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM  367 (371)
Q Consensus       311 ~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~~  367 (371)
                      ....+.      ..++++++++++++|++.  ++++++|+|+++++||+.+.++..+|+++++
T Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~gKvvl~p  349 (349)
T 3pi7_A          289 WLSEWMRQFKERRGPAILEAQKRFSDGRWS--TDVTAVVPLAEAIAWVPAELTKPNGKVFIRP  349 (349)
T ss_dssp             CHHHHHHHTHHHHHHHHHHC-CTTTTSSCC--C-CCEEEEHHHHHHHHHHHHTSSSSCEEEEC
T ss_pred             EehhhhhhCcHHHHHHHHHHHHHHHcCCcc--cccceEEcHHHHHHHHHHHhCCCCceEEEeC
Confidence            654321      135678888999999774  4588999999999999966666556999874

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=3.8e-48  Score=363.68  Aligned_cols=302  Identities=19%  Similarity=0.300  Sum_probs=250.6

Q ss_pred             CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457            8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD   87 (371)
Q Consensus         8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~   87 (371)
                      .+++++.|.|+|++|||+|||.+++||++|++.+.|.++... .+|.++|||++|+|+++|+++++|++||+|+....  
T Consensus        17 ~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~-~~p~v~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~--   93 (349)
T 4a27_A           17 KLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPP-KTPLVPGFECSGIVEALGDSVKGYEIGDRVMAFVN--   93 (349)
T ss_dssp             GEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCC-CSSBCCCSEEEEEEEEECTTCCSCCTTCEEEEECS--
T ss_pred             eeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCcCCCC-CCCccccceeEEEEEEeCCCCCCCCCCCEEEEecC--
Confidence            589999999999999999999999999999999999875432 78999999999999999999999999999965421  


Q ss_pred             CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccc
Q 017457           88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG  167 (371)
Q Consensus        88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~  167 (371)
                                                  +                   |+|+||+.+++++++++|+++++++||+++++
T Consensus        94 ----------------------------~-------------------G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~  126 (349)
T 4a27_A           94 ----------------------------Y-------------------NAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMN  126 (349)
T ss_dssp             ----------------------------S-------------------CCSBSEEEEEGGGEEECCTTSCHHHHHTSHHH
T ss_pred             ----------------------------C-------------------CcceEEEEecHHHeEECCCCCCHHHHHHHHHH
Confidence                                        2                   49999999999999999999999999999999


Q ss_pred             hhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHH
Q 017457          168 VSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV  246 (371)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~  246 (371)
                      ++|||+++.+.+++++|++|||+|+ |++|++++|+|+++|..+|++++ ++++++.++ +|++++++ .+   .++.+.
T Consensus       127 ~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~ga~~~~~-~~---~~~~~~  200 (349)
T 4a27_A          127 FVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-DSVTHLFD-RN---ADYVQE  200 (349)
T ss_dssp             HHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-GGSSEEEE-TT---SCHHHH
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-cCCcEEEc-CC---ccHHHH
Confidence            9999998888899999999999998 99999999999999654898888 677888888 99999998 55   689999


Q ss_pred             HHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCC---------------ceecCHHHHhc-CceEEEe
Q 017457          247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGS---------------PISLNSIEILK-GRSVCGT  310 (371)
Q Consensus       247 i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~---------------~~~~~~~~~~~-~~~~~g~  310 (371)
                      +++++++++|+||||+|++. ++.++++++++ |+++.+|......               ...++...++. +.++.|+
T Consensus       201 ~~~~~~~g~Dvv~d~~g~~~-~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~  278 (349)
T 4a27_A          201 VKRISAEGVDIVLDCLCGDN-TGKGLSLLKPL-GTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGF  278 (349)
T ss_dssp             HHHHCTTCEEEEEEECC--------CTTEEEE-EEEEEEC-------------------------CHHHHHHHTCEEEEE
T ss_pred             HHHhcCCCceEEEECCCchh-HHHHHHHhhcC-CEEEEECCCcccccccccccccccccccccccCHHHHhhcCceEEEE
Confidence            99988779999999999988 69999999998 9999999642111               12244455555 8889988


Q ss_pred             eccCCC--------chhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEeCc
Q 017457          311 YFGGLK--------PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDK  369 (371)
Q Consensus       311 ~~~~~~--------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~~~  369 (371)
                      .+..+.        ..++++++++++++|++.  ++++++|+++++++|++.+.+++.. |+++++++
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~l~~~~~~GKvvi~~~~  344 (349)
T 4a27_A          279 SLLNLLFKQGRAGLIRGVVEKLIGLYNQKKIK--PVVDSLWALEEVKEAMQRIHDRGNIGKLILDVEK  344 (349)
T ss_dssp             CHHHHHHTSCCHHHHHHHHHHHHHHHHTTSCC--CCEEEEECGGGHHHHHHHHHTTCCSSEEEEETTC
T ss_pred             eehheeccccchHHHHHHHHHHHHHHHCCCcc--ccccceECHHHHHHHHHHHHhCCCCceEEEecCC
Confidence            643211        146789999999999774  5688999999999999999887765 99999864

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=4.5e-49  Score=365.01  Aligned_cols=293  Identities=15%  Similarity=0.151  Sum_probs=236.7

Q ss_pred             CCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeecc
Q 017457            5 PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIF   84 (371)
Q Consensus         5 ~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~   84 (371)
                      +.+.+++++.|.|+|++|||||||.+++||++|++.+.|.++..  .+|.++|||++|+|+++|+++++|++||+|+..+
T Consensus        13 ~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~p~i~G~e~~G~V~~vG~~v~~~~vGdrV~~~~   90 (315)
T 3goh_A           13 KTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINW--SNGHVPGVDGAGVIVKVGAKVDSKMLGRRVAYHT   90 (315)
T ss_dssp             TTTEEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHHCTTCC--CTTCCCCSEEEEEEEEECTTSCGGGTTCEEEEEC
T ss_pred             CCCeeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHcCCCCcC--CCCCEeeeeeEEEEEEeCCCCCCCCCCCEEEEeC
Confidence            45669999999999999999999999999999999999987655  7899999999999999999999999999997753


Q ss_pred             CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcc
Q 017457           85 HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLL  164 (371)
Q Consensus        85 ~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~  164 (371)
                                                 +...+                   |+|+||++++++.++++|+++++++||++
T Consensus        91 ---------------------------~~~~~-------------------G~~aey~~v~~~~~~~iP~~~~~~~aa~l  124 (315)
T 3goh_A           91 ---------------------------SLKRH-------------------GSFAEFTVLNTDRVMTLPDNLSFERAAAL  124 (315)
T ss_dssp             ---------------------------CTTSC-------------------CSSBSEEEEETTSEEECCTTSCHHHHHTS
T ss_pred             ---------------------------CCCCC-------------------cccccEEEEcHHHhccCcCCCCHHHHhhC
Confidence                                       22223                   49999999999999999999999999999


Q ss_pred             ccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHH
Q 017457          165 SCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVS  244 (371)
Q Consensus       165 ~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~  244 (371)
                      +++++|||+++ +.+++++|++|||+|+|++|++++|+||++|+ +|++++ +++++++++++|++++++.        .
T Consensus       125 ~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~lGa~~v~~d--------~  193 (315)
T 3goh_A          125 PCPLLTAWQAF-EKIPLTKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKRGVRHLYRE--------P  193 (315)
T ss_dssp             HHHHHHHHHHH-TTSCCCSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHHTEEEEESS--------G
T ss_pred             ccHHHHHHHHH-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHcCCCEEEcC--------H
Confidence            99999999988 88999999999999999999999999999999 999999 9999999999999999841        1


Q ss_pred             HHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCC---Cc----
Q 017457          245 QVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGL---KP----  317 (371)
Q Consensus       245 ~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---~~----  317 (371)
                      +.+    ++++|+||||+|+.. ...++++++++ |+++.+|.....  ..++  .+..++.+....+...   ..    
T Consensus       194 ~~v----~~g~Dvv~d~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  263 (315)
T 3goh_A          194 SQV----TQKYFAIFDAVNSQN-AAALVPSLKAN-GHIICIQDRIPA--PIDP--AFTRTISYHEIALGALHDFGDRQDW  263 (315)
T ss_dssp             GGC----CSCEEEEECC--------TTGGGEEEE-EEEEEECCC--------------CCSEEEEECGGGHHHHCCHHHH
T ss_pred             HHh----CCCccEEEECCCchh-HHHHHHHhcCC-CEEEEEeCCCCc--cccc--hhhhcceeeEEEeecccccCChhHH
Confidence            112    449999999999987 68899999998 999999753221  1111  1222445554433211   01    


Q ss_pred             ---hhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEEeCc
Q 017457          318 ---RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWMDK  369 (371)
Q Consensus       318 ---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~~~~  369 (371)
                         .+.++++++++++|++.  ++++++|+|+++++||+.+. ...+|+++++++
T Consensus       264 ~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~-~~~gKvvi~~~~  315 (315)
T 3goh_A          264 QILMQQGEALLTLIAQGKME--IAAPDIFRFEQMIEALDHSE-QTKLKTVLTLNE  315 (315)
T ss_dssp             HHHHHHHHHHHHHHHTTSSC--CCCCEEEEGGGHHHHHHHHH-HHCCCEEEESCC
T ss_pred             HHHHHHHHHHHHHHHCCCcc--cccceEecHHHHHHHHHHHH-hcCCcEEEEecC
Confidence               13467899999999765  56789999999999999998 555699999875

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=2.5e-47  Score=356.04  Aligned_cols=305  Identities=19%  Similarity=0.238  Sum_probs=255.8

Q ss_pred             CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCC-CCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCC
Q 017457            8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSST-DLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHR   86 (371)
Q Consensus         8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~-~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~   86 (371)
                      .+++++.|.|+|++|||||||.+++||++|++++.|.+ +.....+|.++|||++|+|+++|++|++|++||+|...+. 
T Consensus        15 ~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~-   93 (333)
T 1wly_A           15 NFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTDFTVGERVCTCLP-   93 (333)
T ss_dssp             GEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEEEECTTCCSCCTTCEEEECSS-
T ss_pred             eeEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEEEECCCCCCCCCCCEEEEecC-
Confidence            48899999999999999999999999999999998865 2210168999999999999999999999999999965321 


Q ss_pred             CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcch--hhcc
Q 017457           87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI--ACLL  164 (371)
Q Consensus        87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~--aa~~  164 (371)
                                                  .+                   |+|+||++++++.++++|+++++++  ||++
T Consensus        94 ----------------------------~~-------------------G~~aey~~v~~~~~~~iP~~~~~~~~~aa~l  126 (333)
T 1wly_A           94 ----------------------------PL-------------------GAYSQERLYPAEKLIKVPKDLDLDDVHLAGL  126 (333)
T ss_dssp             ----------------------------SC-------------------CCSBSEEEEEGGGCEECCTTCCCCHHHHHHH
T ss_pred             ----------------------------CC-------------------CcceeEEEecHHHcEeCCCCCChHHhCccch
Confidence                                        01                   4999999999999999999999999  9999


Q ss_pred             ccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccH
Q 017457          165 SCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTV  243 (371)
Q Consensus       165 ~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~  243 (371)
                      +++++|||+++.+..++++|++|||+|+ |++|++++|+++..|+ +|+++++++++++.++++|+++++|+.+   .++
T Consensus       127 ~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~g~~~~~d~~~---~~~  202 (333)
T 1wly_A          127 MLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKLGCHHTINYST---QDF  202 (333)
T ss_dssp             HHHHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEETTT---SCH
T ss_pred             hhhHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEECCC---HHH
Confidence            9999999998877789999999999997 9999999999999999 9999999999999999999999998877   788


Q ss_pred             HHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHH-HHhc-C--ceEEEeeccCCCc-
Q 017457          244 SQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI-EILK-G--RSVCGTYFGGLKP-  317 (371)
Q Consensus       244 ~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~-~--~~~~g~~~~~~~~-  317 (371)
                      .+.+.+.+.+ ++|++||++|+.. ++.++++++++ |+++.+|.... ....++.. .++. +  +++.|+....+.. 
T Consensus       203 ~~~i~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~  279 (333)
T 1wly_A          203 AEVVREITGGKGVDVVYDSIGKDT-LQKSLDCLRPR-GMCAAYGHASG-VADPIRVVEDLGVRGSLFITRPALWHYMSNR  279 (333)
T ss_dssp             HHHHHHHHTTCCEEEEEECSCTTT-HHHHHHTEEEE-EEEEECCCTTC-CCCCCCHHHHTTTTTSCEEECCCGGGGSCSH
T ss_pred             HHHHHHHhCCCCCeEEEECCcHHH-HHHHHHhhccC-CEEEEEecCCC-CcCCCChhHhhhhcCCcEEEEEeehhhccCH
Confidence            8888888876 8999999999855 89999999998 99999997432 23345555 4444 6  7888874421111 


Q ss_pred             ---hhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEeCc
Q 017457          318 ---RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDK  369 (371)
Q Consensus       318 ---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~~~  369 (371)
                         .++++++++++++|++.  +.++++|+++++++|++.+.+++.. |+++.+++
T Consensus       280 ~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  333 (333)
T 1wly_A          280 SEIDEGSKCLFDAVKAGVLH--SSVAKTFPLREAAAAHKYMGGRQTIGSIVLLPQA  333 (333)
T ss_dssp             HHHHHHHHHHHHHHHTTSCC--CCEEEEEEGGGHHHHHHHHHHCSCCSEEEEETTC
T ss_pred             HHHHHHHHHHHHHHHCCCcC--CCcceEEeHHHHHHHHHHHHcCCCceEEEEEeCC
Confidence               23688999999999775  4588999999999999999887654 99998764

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=5.5e-47  Score=351.86  Aligned_cols=294  Identities=18%  Similarity=0.178  Sum_probs=246.9

Q ss_pred             CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCC-----CCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEee
Q 017457            8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSST-----DLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP   82 (371)
Q Consensus         8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~-----~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~   82 (371)
                      .+++++.|.|+|++|||||||.+++||++|++.+.|..     ...  .+|.++|||++|+|+++|+++++|++||+|++
T Consensus        20 ~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~--~~p~v~G~E~~G~V~~vG~~v~~~~~GdrV~~   97 (321)
T 3tqh_A           20 VLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKN--NLPSGLGYDFSGEVIELGSDVNNVNIGDKVMG   97 (321)
T ss_dssp             GEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTT--SCSBCCCCEEEEEEEEECTTCCSCCTTCEEEE
T ss_pred             eeEEEecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccC--CCCCcccceeEEEEEEeCCCCCCCCCCCEEEE
Confidence            38999999999999999999999999999999998832     122  68999999999999999999999999999987


Q ss_pred             ccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhh
Q 017457           83 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC  162 (371)
Q Consensus        83 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa  162 (371)
                      .+...                          ..+                   |+|+||++++++.++++|+++++++||
T Consensus        98 ~~~~~--------------------------~~~-------------------G~~aey~~v~~~~~~~iP~~~~~~~aa  132 (321)
T 3tqh_A           98 IAGFP--------------------------DHP-------------------CCYAEYVCASPDTIIQKLEKLSFLQAA  132 (321)
T ss_dssp             ECSTT--------------------------TCC-------------------CCSBSEEEECGGGEEECCTTSCHHHHH
T ss_pred             ccCCC--------------------------CCC-------------------CcceEEEEecHHHhccCCCCCCHHHHh
Confidence            54210                          112                   499999999999999999999999999


Q ss_pred             ccccchhhhHHHHHHHcCCCCCCeEEEEc-CChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCc
Q 017457          163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFG-LGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK  241 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G-~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~  241 (371)
                      +++++++|||+++ +.+++++|++|||+| +|++|++++|+|+++|+ +|++++ +++++++++++|+++++|+++   .
T Consensus       133 ~l~~~~~ta~~al-~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~-~~~~~~~~~~lGa~~~i~~~~---~  206 (321)
T 3tqh_A          133 SLPTAGLTALQAL-NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTA-SKRNHAFLKALGAEQCINYHE---E  206 (321)
T ss_dssp             HSHHHHHHHHHHH-HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEE-CHHHHHHHHHHTCSEEEETTT---S
T ss_pred             hhhhHHHHHHHHH-HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEe-ccchHHHHHHcCCCEEEeCCC---c
Confidence            9999999999987 889999999999998 59999999999999999 899987 566789999999999999887   5


Q ss_pred             c-HHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCchhh
Q 017457          242 T-VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSD  320 (371)
Q Consensus       242 ~-~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  320 (371)
                      + +.+.+     +++|+||||+|++. .+.++++++++ |+++.+|.....  . .......+++++.++..  ....++
T Consensus       207 ~~~~~~~-----~g~D~v~d~~g~~~-~~~~~~~l~~~-G~iv~~g~~~~~--~-~~~~~~~~~~~~~~~~~--~~~~~~  274 (321)
T 3tqh_A          207 DFLLAIS-----TPVDAVIDLVGGDV-GIQSIDCLKET-GCIVSVPTITAG--R-VIEVAKQKHRRAFGLLK--QFNIEE  274 (321)
T ss_dssp             CHHHHCC-----SCEEEEEESSCHHH-HHHHGGGEEEE-EEEEECCSTTHH--H-HHHHHHHTTCEEECCCC--CCCHHH
T ss_pred             chhhhhc-----cCCCEEEECCCcHH-HHHHHHhccCC-CEEEEeCCCCch--h-hhhhhhhcceEEEEEec--CCCHHH
Confidence            5 44332     38999999999988 69999999998 999999853211  1 11112233778887532  223578


Q ss_pred             HHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEeC
Q 017457          321 IATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMD  368 (371)
Q Consensus       321 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~~  368 (371)
                      ++++++++++|++.+  .++++|+++++++||+.+.+++.. |++++++
T Consensus       275 ~~~~~~l~~~g~l~~--~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~~  321 (321)
T 3tqh_A          275 LHYLGKLVSEDKLRI--EISRIFQLSEAVTAHELLETGHVRGKLVFKVR  321 (321)
T ss_dssp             HHHHHHHHHTTSSCC--CEEEEECGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             HHHHHHHHHCCCccc--ccccEEcHHHHHHHHHHHHcCCCCceEEEEeC
Confidence            999999999998765  488999999999999999998765 9999864

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.7e-46  Score=350.13  Aligned_cols=299  Identities=20%  Similarity=0.282  Sum_probs=253.9

Q ss_pred             CcEE-EEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCC
Q 017457            8 PLVI-EEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHR   86 (371)
Q Consensus         8 ~l~~-~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~   86 (371)
                      .+++ ++.|.|+|++|||+|||.+++||++|++++.|.++.. +.+|.++|||++|+|+++|+++++|++||+|+.... 
T Consensus        43 ~l~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~-~~~P~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~-  120 (351)
T 1yb5_A           43 VLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRK-PLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSST-  120 (351)
T ss_dssp             GEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCC-CCSSBCCCSCEEEEEEEECTTCTTCCTTCEEEESCC-
T ss_pred             eeEEeeecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCC-CCCCCcCCceeEEEEEEECCCCCCCCCCCEEEEeCC-
Confidence            4788 7999999999999999999999999999999876432 268999999999999999999999999999966421 


Q ss_pred             CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcccc
Q 017457           87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC  166 (371)
Q Consensus        87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~  166 (371)
                                                  .+                   |+|+||++++++.++++|+++++++||++++
T Consensus       121 ----------------------------~~-------------------G~~aey~~v~~~~~~~~P~~l~~~~aA~l~~  153 (351)
T 1yb5_A          121 ----------------------------IS-------------------GGYAEYALAADHTVYKLPEKLDFKQGAAIGI  153 (351)
T ss_dssp             ----------------------------SS-------------------CSSBSEEEEEGGGEEECCTTSCHHHHTTTHH
T ss_pred             ----------------------------CC-------------------CcceeEEEECHHHeEECCCCCCHHHHHhhhh
Confidence                                        11                   4999999999999999999999999999999


Q ss_pred             chhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHH
Q 017457          167 GVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQ  245 (371)
Q Consensus       167 ~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~  245 (371)
                      ++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|++.++|+.+   .++.+
T Consensus       154 ~~~ta~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~d~~~---~~~~~  229 (351)
T 1yb5_A          154 PYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFNHRE---VNYID  229 (351)
T ss_dssp             HHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTS---TTHHH
T ss_pred             HHHHHHHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHcCCCEEEeCCC---chHHH
Confidence            99999998877889999999999998 9999999999999999 9999999999999999999999999877   78888


Q ss_pred             HHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhhH--
Q 017457          246 VIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDI--  321 (371)
Q Consensus       246 ~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~--  321 (371)
                      .+.+.+++ ++|++||++|+.. +..++++++++ |+++.+|.. .  ...++...++. ++++.|+.+.... .+++  
T Consensus       230 ~~~~~~~~~~~D~vi~~~G~~~-~~~~~~~l~~~-G~iv~~g~~-~--~~~~~~~~~~~~~~~i~g~~~~~~~-~~~~~~  303 (351)
T 1yb5_A          230 KIKKYVGEKGIDIIIEMLANVN-LSKDLSLLSHG-GRVIVVGSR-G--TIEINPRDTMAKESSIIGVTLFSST-KEEFQQ  303 (351)
T ss_dssp             HHHHHHCTTCEEEEEESCHHHH-HHHHHHHEEEE-EEEEECCCC-S--CEEECTHHHHTTTCEEEECCGGGCC-HHHHHH
T ss_pred             HHHHHcCCCCcEEEEECCChHH-HHHHHHhccCC-CEEEEEecC-C--CCccCHHHHHhCCcEEEEEEeecCC-HHHHHH
Confidence            89888877 8999999999876 88999999998 999999963 2  24555555555 8899998643322 2334  


Q ss_pred             --HHHHHHHHcCCCCCCCceeEEEecccHHHHHHH-HhcCc-eeeEEEEe
Q 017457          322 --ATLAQKYLDKELNLGEFITHEVSFHDINKAFDL-LLEGK-SLRCIIWM  367 (371)
Q Consensus       322 --~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~-~~~~~-~~kvvv~~  367 (371)
                        +.+.+++++|++.  ++++++|+++++++|++. +.++. .+|+++.+
T Consensus       304 ~~~~l~~~~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~~gKvvi~~  351 (351)
T 1yb5_A          304 YAAALQAGMEIGWLK--PVIGSQYPLEKVAEAHENIIHGSGATGKMILLL  351 (351)
T ss_dssp             HHHHHHHHHHHTCCC--CCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             HHHHHHHHHHCCCcc--CccceEEcHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence              4455677788654  568899999999999998 55544 45999864

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=4.8e-48  Score=359.53  Aligned_cols=302  Identities=14%  Similarity=0.128  Sum_probs=252.1

Q ss_pred             CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457            8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD   87 (371)
Q Consensus         8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~   87 (371)
                      .++++++|.|+|++|||||||++++||++|++.+.|.++... .+|.++|||++|+|+++|  +++|++||+|++.+.  
T Consensus        14 ~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~-~~p~v~G~E~~G~V~~~G--v~~~~vGdrV~~~~~--   88 (324)
T 3nx4_A           14 LASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIR-HFPMIPGIDFAGTVHASE--DPRFHAGQEVLLTGW--   88 (324)
T ss_dssp             EEEEEECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCTTCCC-SSSBCCCSEEEEEEEEES--STTCCTTCEEEEECT--
T ss_pred             eeeEeecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCCCCCC-CCCccccceeEEEEEEeC--CCCCCCCCEEEEccc--
Confidence            388999999999999999999999999999999999876432 789999999999999999  578999999987531  


Q ss_pred             CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccc
Q 017457           88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG  167 (371)
Q Consensus        88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~  167 (371)
                                            ..|...+|                   +|+||+.+++++++++|+++++++||++++.
T Consensus        89 ----------------------~~g~~~~G-------------------~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~  127 (324)
T 3nx4_A           89 ----------------------GVGENHWG-------------------GLAERARVKGDWLVALPAGLSSRNAMIIGTA  127 (324)
T ss_dssp             ----------------------TBTTTBCC-------------------SSBSEEEECGGGCEECCTTCCHHHHHHHHHH
T ss_pred             ----------------------ccCCCCCC-------------------ceeeEEecCHHHcEECCCCCCHHHHHHhhhH
Confidence                                  03333344                   9999999999999999999999999999999


Q ss_pred             hhhhHHHHHH--HcCCCCCC-eEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccH
Q 017457          168 VSTGVGAAWK--VAGVEVGS-TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTV  243 (371)
Q Consensus       168 ~~ta~~~l~~--~~~~~~g~-~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~  243 (371)
                      ++|||+++..  ..++++++ +|||+|+ |++|++++|+||++|+ +|++++++++++++++++|+++++|+++   .+.
T Consensus       128 ~~ta~~al~~~~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~---~~~  203 (324)
T 3nx4_A          128 GFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKSLGANRILSRDE---FAE  203 (324)
T ss_dssp             HHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTCSEEEEGGG---SSC
T ss_pred             HHHHHHHHHHhhhcccCCCCCeEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEecCC---HHH
Confidence            9999998753  45566633 4999998 9999999999999999 9999999999999999999999998876   332


Q ss_pred             HHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCc---hh
Q 017457          244 SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKP---RS  319 (371)
Q Consensus       244 ~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~---~~  319 (371)
                         +++++++++|++||++|++. ++.++++++++ |+++.+|... ....+++...++. ++++.|+.......   .+
T Consensus       204 ---~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  277 (324)
T 3nx4_A          204 ---SRPLEKQLWAGAIDTVGDKV-LAKVLAQMNYG-GCVAACGLAG-GFALPTTVMPFILRNVRLQGVDSVMTPPARRAE  277 (324)
T ss_dssp             ---CCSSCCCCEEEEEESSCHHH-HHHHHHTEEEE-EEEEECCCTT-CSEEEEESHHHHHHCCEEEECCSTTCCHHHHHH
T ss_pred             ---HHhhcCCCccEEEECCCcHH-HHHHHHHHhcC-CEEEEEecCC-CCCCCCCHHHHhhcCeEEEEEeccccChHHHHH
Confidence               45556669999999999875 99999999998 9999999743 3344555555544 99999986544331   24


Q ss_pred             hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEeC
Q 017457          320 DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMD  368 (371)
Q Consensus       320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~~  368 (371)
                      .++++++++++|++.+  + +++|+++++++||+.+.+++.. |++++++
T Consensus       278 ~~~~~~~l~~~g~l~~--~-~~~~~l~~~~~A~~~~~~~~~~gkvvv~~~  324 (324)
T 3nx4_A          278 AWARLVKDLPESFYAQ--A-ATEITLADAPKFADAIINNQVQGRTLVKIK  324 (324)
T ss_dssp             HHHHHHHHSCHHHHHH--H-EEEEEGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             HHHHHHHHHHcCCCCC--C-ceeEeHHHHHHHHHHHHhCCCCceEEEecC
Confidence            5788889999997653  4 7999999999999999998775 9999874

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=6.3e-47  Score=356.44  Aligned_cols=300  Identities=20%  Similarity=0.257  Sum_probs=246.9

Q ss_pred             cEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCCC
Q 017457            9 LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDC   88 (371)
Q Consensus         9 l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~   88 (371)
                      +++++.|.|+|+++||+|||.+++||++|++.+.|.++... .+|.++|||++|+|+++|++|++|++||+|++.+.   
T Consensus        42 l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~-~~P~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~---  117 (357)
T 1zsy_A           42 VELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLP-ELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPANA---  117 (357)
T ss_dssp             EEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCC-CSSEECCSCCEEEEEEECTTCCSCCTTCEEEESSS---
T ss_pred             EEEeeccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCCCCC-CCCccccceEEEEEEEeCCCCCCCCCCCEEEEcCC---
Confidence            78899999999999999999999999999999998765432 57999999999999999999999999999976431   


Q ss_pred             CCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccch
Q 017457           89 GECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGV  168 (371)
Q Consensus        89 ~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~~  168 (371)
                                                .+                   |+|+||++++++.++++|+++++++||++++++
T Consensus       118 --------------------------~~-------------------G~~aey~~v~~~~~~~iP~~l~~~~Aa~l~~~~  152 (357)
T 1zsy_A          118 --------------------------GL-------------------GTWRTEAVFSEEALIQVPSDIPLQSAATLGVNP  152 (357)
T ss_dssp             --------------------------CS-------------------CCSBSEEEEEGGGEEEECSSSCHHHHHHTTSHH
T ss_pred             --------------------------CC-------------------ccceeEEecCHHHcEECCCCCCHHHHhhhcccH
Confidence                                      01                   499999999999999999999999999999999


Q ss_pred             hhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh----hHHHHHHHhCcceEEcCCCCCCccH
Q 017457          169 STGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP----EKFEIGKKFGITDFINPATCGDKTV  243 (371)
Q Consensus       169 ~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~----~~~~~~~~lga~~v~~~~~~~~~~~  243 (371)
                      +|||+++.+.+++++|++|||+|+ |++|++++|+||++|+ +++++.++.    +++++++++|+++++++++    ..
T Consensus       153 ~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~----~~  227 (357)
T 1zsy_A          153 CTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGL-RTINVVRDRPDIQKLSDRLKSLGAEHVITEEE----LR  227 (357)
T ss_dssp             HHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEECCCSCHHHHHHHHHHTTCSEEEEHHH----HH
T ss_pred             HHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCC-EEEEEecCccchHHHHHHHHhcCCcEEEecCc----ch
Confidence            999998877789999999999998 9999999999999999 666665432    3567889999999998643    11


Q ss_pred             HHHHHHhhCC--CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCC----
Q 017457          244 SQVIKEMTDG--GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLK----  316 (371)
Q Consensus       244 ~~~i~~~~~g--g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~----  316 (371)
                      .+.+.+++.+  ++|+|||++|++. ...++++++++ |+++.+|... .....++...+.. ++++.|+....+.    
T Consensus       228 ~~~~~~~~~~~~~~Dvvid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~  304 (357)
T 1zsy_A          228 RPEMKNFFKDMPQPRLALNCVGGKS-STELLRQLARG-GTMVTYGGMA-KQPVVASVSLLIFKDLKLRGFWLSQWKKDHS  304 (357)
T ss_dssp             SGGGGGTTSSSCCCSEEEESSCHHH-HHHHHTTSCTT-CEEEECCCCT-TCCBCCCHHHHHHSCCEEEECCHHHHHHHSC
T ss_pred             HHHHHHHHhCCCCceEEEECCCcHH-HHHHHHhhCCC-CEEEEEecCC-CCCCCCCHHHHHhcCceEEEEEcchhcccCC
Confidence            2334555554  5999999999877 56789999998 9999998633 2334566555554 8999998654221    


Q ss_pred             ---chhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEe
Q 017457          317 ---PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM  367 (371)
Q Consensus       317 ---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~  367 (371)
                         ..+.++++++++++|++.+.  +.++|+|+++++|++.+.+++.. |+++.+
T Consensus       305 ~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  357 (357)
T 1zsy_A          305 PDQFKELILTLCDLIRRGQLTAP--ACSQVPLQDYQSALEASMKPFISSKQILTM  357 (357)
T ss_dssp             HHHHHHHHHHHHHHHHTTSSCCC--CEEEEEGGGHHHHHHHHTSSSCSSEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHcCCCcCc--cceEEcHHHHHHHHHHHHhCCCCCcEEEeC
Confidence               12457889999999987754  45999999999999999887654 999864

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=4.6e-46  Score=351.03  Aligned_cols=303  Identities=18%  Similarity=0.224  Sum_probs=254.2

Q ss_pred             CcEE-EEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCC-CcCCCCEEeeccC
Q 017457            8 PLVI-EEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE-EVKERDLVLPIFH   85 (371)
Q Consensus         8 ~l~~-~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~-~~~~Gd~V~~~~~   85 (371)
                      .+++ +++|.|+|++|||||||.+++||++|++++.|.++.. ..+|.++|||++|+|+++|++|+ +|++||+|+... 
T Consensus        39 ~l~~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~-~~~P~i~G~E~~G~V~~vG~~V~~~~~vGdrV~~~~-  116 (362)
T 2c0c_A           39 AVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPS-VKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMA-  116 (362)
T ss_dssp             HEEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTCTT-CCSCEECCSEEEEEEEEECTTGGGTCCTTCEEEEEC-
T ss_pred             eeEEEeecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCCCC-CCCCCCCCceeEEEEEEECCCccCCCCCCCEEEEcc-
Confidence            4788 8999999999999999999999999999999876432 16899999999999999999999 999999996632 


Q ss_pred             CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccc
Q 017457           86 RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLS  165 (371)
Q Consensus        86 ~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~  165 (371)
                                                    +                   |+|+||++++++.++++|+. + .++|+++
T Consensus       117 ------------------------------~-------------------G~~aey~~v~~~~~~~~P~~-~-~~aaal~  145 (362)
T 2c0c_A          117 ------------------------------P-------------------GSFAEYTVVPASIATPVPSV-K-PEYLTLL  145 (362)
T ss_dssp             ------------------------------S-------------------CCSBSEEEEEGGGCEECSSS-C-HHHHTTT
T ss_pred             ------------------------------C-------------------CcceeEEEEcHHHeEECCCC-c-hHhhccc
Confidence                                          1                   49999999999999999996 3 4677788


Q ss_pred             cchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHH
Q 017457          166 CGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVS  244 (371)
Q Consensus       166 ~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~  244 (371)
                      ++++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|+++++++.+   .++.
T Consensus       146 ~~~~ta~~al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~---~~~~  221 (362)
T 2c0c_A          146 VSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKSLGCDRPINYKT---EPVG  221 (362)
T ss_dssp             THHHHHHHHHHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTT---SCHH
T ss_pred             chHHHHHHHHHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHcCCcEEEecCC---hhHH
Confidence            899999999888889999999999996 9999999999999999 9999999999999999999999999877   6788


Q ss_pred             HHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCc-e--------ecCHHHHhcCceEEEeeccCC
Q 017457          245 QVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP-I--------SLNSIEILKGRSVCGTYFGGL  315 (371)
Q Consensus       245 ~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~-~--------~~~~~~~~~~~~~~g~~~~~~  315 (371)
                      +.+++.+++++|++||++|+.. ++.++++++++ |+++.+|....... .        .++...+.+++++.|+....+
T Consensus       222 ~~~~~~~~~g~D~vid~~g~~~-~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  299 (362)
T 2c0c_A          222 TVLKQEYPEGVDVVYESVGGAM-FDLAVDALATK-GRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHY  299 (362)
T ss_dssp             HHHHHHCTTCEEEEEECSCTHH-HHHHHHHEEEE-EEEEECCCGGGTTSSSCCCCCCCTTHHHHHHHHTCEEEECCGGGC
T ss_pred             HHHHHhcCCCCCEEEECCCHHH-HHHHHHHHhcC-CEEEEEeCCCCcCcccccccccccccHHHHHhhcceEEEEEhhhh
Confidence            8888877559999999999865 89999999998 99999997432110 0        122222334899999865443


Q ss_pred             C--chhhHHHHHHHHHcCCCCCCCc------eeEEEecccHHHHHHHHhcCce-eeEEEEeCc
Q 017457          316 K--PRSDIATLAQKYLDKELNLGEF------ITHEVSFHDINKAFDLLLEGKS-LRCIIWMDK  369 (371)
Q Consensus       316 ~--~~~~~~~~~~~~~~g~~~~~~~------~~~~~~~~~~~~a~~~~~~~~~-~kvvv~~~~  369 (371)
                      .  ..++++++++++++|++.+...      +++.++++++++|++.+.+++. +|+++.+++
T Consensus       300 ~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~  362 (362)
T 2c0c_A          300 LSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVELPH  362 (362)
T ss_dssp             GGGHHHHHHHHHHHHHTTCSCCCEECSTTSTTCSCBSTTHHHHHHHHHHTTCCSBEEEEECCC
T ss_pred             hhhHHHHHHHHHHHHHCCCeEeeeccccccccccccCHHHHHHHHHHHHcCCCCceEEEEcCC
Confidence            2  2457899999999998876532      2356899999999999988765 499998764

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.2e-46  Score=347.70  Aligned_cols=301  Identities=18%  Similarity=0.173  Sum_probs=253.5

Q ss_pred             CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457            8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD   87 (371)
Q Consensus         8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~   87 (371)
                      .+++++.|.|+|+++||+|||.+++||++|++.+.|.++..  .+|.++|||++|+|+++|++|++|++||+| ...   
T Consensus        15 ~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~p~v~G~E~~G~V~~vG~~v~~~~~GdrV-~~~---   88 (327)
T 1qor_A           15 VLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPP--SLPSGLGTEAAGIVSKVGSGVKHIKAGDRV-VYA---   88 (327)
T ss_dssp             GCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCS--SSSBCCCSCEEEEEEEECTTCCSCCTTCEE-EES---
T ss_pred             heEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCC--CCCCCCCceeEEEEEEECCCCCCCCCCCEE-EEC---
Confidence            48899999999999999999999999999999999876433  689999999999999999999999999999 321   


Q ss_pred             CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccc
Q 017457           88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG  167 (371)
Q Consensus        88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~  167 (371)
                                              | ..+                   |+|+||++++++.++++|+++|+++||+++++
T Consensus        89 ------------------------g-~~~-------------------G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~  124 (327)
T 1qor_A           89 ------------------------Q-SAL-------------------GAYSSVHNIIADKAAILPAAISFEQAAASFLK  124 (327)
T ss_dssp             ------------------------C-CSS-------------------CCSBSEEEEEGGGEEECCTTSCHHHHHHHHHH
T ss_pred             ------------------------C-CCC-------------------ceeeeEEEecHHHcEECCCCCCHHHHHHhhhH
Confidence                                    0 011                   49999999999999999999999999999999


Q ss_pred             hhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHH
Q 017457          168 VSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV  246 (371)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~  246 (371)
                      ++|||+++.+..++++|++|||+|+ |++|++++|+++..|+ +|+++++++++++.++++|+++++|+.+   .++.+.
T Consensus       125 ~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~  200 (327)
T 1qor_A          125 GLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVINYRE---EDLVER  200 (327)
T ss_dssp             HHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEETTT---SCHHHH
T ss_pred             HHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEECCC---ccHHHH
Confidence            9999998877889999999999996 9999999999999999 9999999999999999999999998877   788888


Q ss_pred             HHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc--CceEEEeeccCCC-----ch
Q 017457          247 IKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK--GRSVCGTYFGGLK-----PR  318 (371)
Q Consensus       247 i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~-----~~  318 (371)
                      +.+.+.+ ++|++||++|... ++.++++++++ |+++.+|.... ....++...++.  ++++.+.....+.     ..
T Consensus       201 ~~~~~~~~~~D~vi~~~g~~~-~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (327)
T 1qor_A          201 LKEITGGKKVRVVYDSVGRDT-WERSLDCLQRR-GLMVSFGNSSG-AVTGVNLGILNQKGSLYVTRPSLQGYITTREELT  277 (327)
T ss_dssp             HHHHTTTCCEEEEEECSCGGG-HHHHHHTEEEE-EEEEECCCTTC-CCCCBCTHHHHHTTSCEEECCCHHHHCCSHHHHH
T ss_pred             HHHHhCCCCceEEEECCchHH-HHHHHHHhcCC-CEEEEEecCCC-CCCccCHHHHhhccceEEEccchhhhcCCHHHHH
Confidence            8888876 8999999999544 99999999998 99999997432 223455444433  4566654321111     13


Q ss_pred             hhHHHHHHHHHcCCCCCCCcee--EEEecccHHHHHHHHhcCce-eeEEEEe
Q 017457          319 SDIATLAQKYLDKELNLGEFIT--HEVSFHDINKAFDLLLEGKS-LRCIIWM  367 (371)
Q Consensus       319 ~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~a~~~~~~~~~-~kvvv~~  367 (371)
                      +.++++++++++|++.+  .++  ++|+|+++++|++.+.+++. +|+++.+
T Consensus       278 ~~~~~~~~l~~~g~l~~--~i~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  327 (327)
T 1qor_A          278 EASNELFSLIASGVIKV--DVAEQQKYPLKDAQRAHEILESRATQGSSLLIP  327 (327)
T ss_dssp             HHHHHHHHHHHTTSSCC--CCCGGGEEEGGGHHHHHHHHHTTCCCBCCEEEC
T ss_pred             HHHHHHHHHHHCCCccc--ccccCcEEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence            45789999999997764  477  89999999999999988765 4988863

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=2.5e-46  Score=353.51  Aligned_cols=306  Identities=16%  Similarity=0.163  Sum_probs=251.4

Q ss_pred             cEEEEEecCCCC--CCeEEEEEeEeecccccccccccCCCCCCCCCC---------ccccccccEEEEEeCCCCCCcCCC
Q 017457            9 LVIEEIEVEPPK--AWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLP---------VIFGHEAVGVVESVGEYVEEVKER   77 (371)
Q Consensus         9 l~~~~~~~~~~~--~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p---------~~~G~e~~G~Vv~vG~~v~~~~~G   77 (371)
                      ++++++|.|+|.  +|||+|||.+++||++|++.+.|.++... .+|         .++|||++|+|+++|++|++|++|
T Consensus        19 l~~~~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~-~~P~~~~~~~p~~i~G~E~~G~V~~vG~~v~~~~vG   97 (364)
T 1gu7_A           19 LFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKP-AKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAG   97 (364)
T ss_dssp             CEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCC-CCBSTTCCSSCBEECCSCCEEEEEEECTTCCSCCTT
T ss_pred             eEEeeccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCCC-CCCccccccCcccccCceeEEEEEEeCCCCCcCCCC
Confidence            889999999887  99999999999999999999998765321 466         899999999999999999999999


Q ss_pred             CEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCC---
Q 017457           78 DLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP---  154 (371)
Q Consensus        78 d~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~---  154 (371)
                      |+|++...                             .+                   |+|+||++++++.++++|+   
T Consensus        98 drV~~~~~-----------------------------~~-------------------G~~aey~~v~~~~~~~~P~~~~  129 (364)
T 1gu7_A           98 DWVIPSHV-----------------------------NF-------------------GTWRTHALGNDDDFIKLPNPAQ  129 (364)
T ss_dssp             CEEEESSS-----------------------------CC-------------------CCSBSEEEEEGGGEEEECCHHH
T ss_pred             CEEEecCC-----------------------------CC-------------------CcchheEecCHHHeEEcCCccc
Confidence            99976421                             11                   4999999999999999998   


Q ss_pred             --------CCCcchhhccccchhhhHHHHHHHcCCCCC-CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH----
Q 017457          155 --------HIPLGIACLLSCGVSTGVGAAWKVAGVEVG-STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK----  220 (371)
Q Consensus       155 --------~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g-~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~----  220 (371)
                              ++++++||+++++++|||+++.+..++++| ++|||+|+ |++|++++|+||++|+ +|++++++.++    
T Consensus       130 ~~~~~~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga-~vi~~~~~~~~~~~~  208 (364)
T 1gu7_A          130 SKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDRPNLDEV  208 (364)
T ss_dssp             HHHTTCSCCCCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTC-EEEEEECCCTTHHHH
T ss_pred             cccccccCCCCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCC-EEEEEecCccccHHH
Confidence                    899999999999999999987766789999 99999998 9999999999999999 88888765544    


Q ss_pred             HHHHHHhCcceEEcCCCCCCccHHHHHHHhh--CC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecC
Q 017457          221 FEIGKKFGITDFINPATCGDKTVSQVIKEMT--DG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLN  297 (371)
Q Consensus       221 ~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~--~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~  297 (371)
                      ++.++++|+++++++++....++.+.+++++  ++ ++|+||||+|+.. ...++++++++ |+++.+|... .....++
T Consensus       209 ~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g~Dvvid~~G~~~-~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~  285 (364)
T 1gu7_A          209 VASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKS-STGIARKLNNN-GLMLTYGGMS-FQPVTIP  285 (364)
T ss_dssp             HHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHH-HHHHHHTSCTT-CEEEECCCCS-SCCEEEC
T ss_pred             HHHHHhcCCeEEEecCccchHHHHHHHHHHhhccCCCceEEEECCCchh-HHHHHHHhccC-CEEEEecCCC-CCCcccC
Confidence            6778899999999865200146788888888  55 9999999999888 45889999998 9999999743 3345666


Q ss_pred             HHHHhc-CceEEEeeccCCC---c---hhhHHHHHHHHHcCCCCCCCceeEEE-ecccHHHHHHHHhcCcee-eEEEEe
Q 017457          298 SIEILK-GRSVCGTYFGGLK---P---RSDIATLAQKYLDKELNLGEFITHEV-SFHDINKAFDLLLEGKSL-RCIIWM  367 (371)
Q Consensus       298 ~~~~~~-~~~~~g~~~~~~~---~---~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~-kvvv~~  367 (371)
                      ...++. ++++.|+....+.   .   .++++++++++++|++.+....+..+ +++++++||+.+.+++.. |+++.+
T Consensus       286 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  364 (364)
T 1gu7_A          286 TSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY  364 (364)
T ss_dssp             HHHHHHSCCEEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             HHHHhhcCcEEEEEchhHhcccCHHHHHHHHHHHHHHHHcCCcccccceEEecCchhhHHHHHHHHHhCCCCceEEEeC
Confidence            666554 8999997643311   0   25688999999999988765443444 345999999999887554 999875

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=6.3e-45  Score=340.19  Aligned_cols=297  Identities=18%  Similarity=0.167  Sum_probs=252.5

Q ss_pred             CCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCcccccc----ccEEEEEeCCCCCCcCCCCEEe
Q 017457            6 GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHE----AVGVVESVGEYVEEVKERDLVL   81 (371)
Q Consensus         6 ~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e----~~G~Vv~vG~~v~~~~~Gd~V~   81 (371)
                      .+.++++++|.|+|++|||||||++++||++|.+.+.+....   .+|.++|||    ++|+|++.  ++++|++||+|+
T Consensus        23 ~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~~~~~---~~p~~~G~e~g~~~~G~V~~~--~v~~~~vGdrV~   97 (336)
T 4b7c_A           23 RDTFSFVETPLGEPAEGQILVKNEYLSLDPAMRGWMNDARSY---IPPVGIGEVMRALGVGKVLVS--KHPGFQAGDYVN   97 (336)
T ss_dssp             TTSEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHHSCSCCS---SCCCCTTSBCCCEEEEEEEEE--CSTTCCTTCEEE
T ss_pred             CCceEEEeccCCCCCCCEEEEEEEEEEeCHHHHhhhhccccc---CCCCCCCcccCCceEEEEEec--CCCCCCCCCEEe
Confidence            456999999999999999999999999999998887764322   356677777    79999994  588999999996


Q ss_pred             eccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchh
Q 017457           82 PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA  161 (371)
Q Consensus        82 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~a  161 (371)
                      +.                                                    |+|+||++++++.++++|+++++.++
T Consensus        98 ~~----------------------------------------------------G~~aey~~v~~~~~~~~P~~~~~~~~  125 (336)
T 4b7c_A           98 GA----------------------------------------------------LGVQDYFIGEPKGFYKVDPSRAPLPR  125 (336)
T ss_dssp             EE----------------------------------------------------CCSBSEEEECCTTCEEECTTTSCGGG
T ss_pred             cc----------------------------------------------------CCceEEEEechHHeEEcCCCCCchHH
Confidence            52                                                    48999999999999999999987776


Q ss_pred             --hccccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCcceEEcCCC
Q 017457          162 --CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDFINPAT  237 (371)
Q Consensus       162 --a~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~~v~~~~~  237 (371)
                        ++++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+++|+ +|+++++++++++.+ +++|+++++|+.+
T Consensus       126 a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~  204 (336)
T 4b7c_A          126 YLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFLVEELGFDGAIDYKN  204 (336)
T ss_dssp             GGTTTSHHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCCSEEEETTT
T ss_pred             HhhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCCEEEECCC
Confidence              7788999999999878899999999999998 9999999999999999 999999999999999 8999999999887


Q ss_pred             CCCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCC-----CceecCHHHHhc-CceEEEee
Q 017457          238 CGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG-----SPISLNSIEILK-GRSVCGTY  311 (371)
Q Consensus       238 ~~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-----~~~~~~~~~~~~-~~~~~g~~  311 (371)
                         .++.+.+.+.+++++|++||++|+.. ++.++++++++ |+++.+|.....     ....++...++. ++++.|+.
T Consensus       205 ---~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~  279 (336)
T 4b7c_A          205 ---EDLAAGLKRECPKGIDVFFDNVGGEI-LDTVLTRIAFK-ARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMV  279 (336)
T ss_dssp             ---SCHHHHHHHHCTTCEEEEEESSCHHH-HHHHHTTEEEE-EEEEECCCGGGGC------CCTTTTHHHHTTCEEEECC
T ss_pred             ---HHHHHHHHHhcCCCceEEEECCCcch-HHHHHHHHhhC-CEEEEEeecccccCCcccccchhHHHHHhCCcEEEEEE
Confidence               78999999998669999999999865 99999999998 999999975411     113444444544 89999987


Q ss_pred             ccCCC--chhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEe
Q 017457          312 FGGLK--PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM  367 (371)
Q Consensus       312 ~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~  367 (371)
                      ...+.  ..++++++++++++|++.+.  +...++++++++||+.+.+++.. |+++++
T Consensus       280 ~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  336 (336)
T 4b7c_A          280 VMDYAQRFPEGLKEMATWLAEGKLQSR--EDIVEGLETFPETLLKLFSGENFGKLVLKV  336 (336)
T ss_dssp             GGGGGGGHHHHHHHHHHHHHTTSSCCC--EEEEECGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             hhhhhhhhHHHHHHHHHHHHCCCcccc--eeeecCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            65542  13678899999999988766  44568999999999999988765 999875

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=1.2e-45  Score=344.31  Aligned_cols=305  Identities=17%  Similarity=0.209  Sum_probs=244.3

Q ss_pred             CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCC
Q 017457            7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHR   86 (371)
Q Consensus         7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~   86 (371)
                      ..++++++|.|+|++|||+|||.+++||++|++.+.|.++... .+|.++|||++|+|+++|  +++|++||+|++... 
T Consensus        17 ~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~-~~p~i~G~E~~G~V~~~~--v~~~~vGdrV~~~~~-   92 (330)
T 1tt7_A           17 VSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVR-EYPLILGIDAAGTVVSSN--DPRFAEGDEVIATSY-   92 (330)
T ss_dssp             CCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCS-SCSEECCSEEEEEEEECS--STTCCTTCEEEEEST-
T ss_pred             cceeEeecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCCCCcC-CCCccccceEEEEEEEcC--CCCCCCCCEEEEccc-
Confidence            3689999999999999999999999999999999988754322 689999999999999964  678999999977532 


Q ss_pred             CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcccc
Q 017457           87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC  166 (371)
Q Consensus        87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~  166 (371)
                                             ..|...+                   |+|+||++++++.++++|+++++++||++++
T Consensus        93 -----------------------~~g~~~~-------------------G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~  130 (330)
T 1tt7_A           93 -----------------------ELGVSRD-------------------GGLSEYASVPGDWLVPLPQNLSLKEAMVYGT  130 (330)
T ss_dssp             -----------------------TBTTTBC-------------------CSSBSSEEECGGGEEECCTTCCHHHHHHHHH
T ss_pred             -----------------------ccCCCCC-------------------ccceeEEEecHHHeEECCCCCCHHHHhhccc
Confidence                                   0222233                   4999999999999999999999999999999


Q ss_pred             chhhhHHHHH--HHcCCCCCC-eEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457          167 GVSTGVGAAW--KVAGVEVGS-TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT  242 (371)
Q Consensus       167 ~~~ta~~~l~--~~~~~~~g~-~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~  242 (371)
                      ++.|||+++.  ...++++|+ +|||+|+ |++|++++|+|+++|+ +|+++++++++++.++++|+++++|+++   .+
T Consensus       131 ~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lGa~~v~~~~~---~~  206 (330)
T 1tt7_A          131 AGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLGASEVISRED---VY  206 (330)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHTCSEEEEHHH---HC
T ss_pred             hHHHHHHHHHHHHhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEEEECCC---ch
Confidence            9999998764  346788986 9999998 9999999999999999 8999999999999999999999987643   11


Q ss_pred             HHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCc---h
Q 017457          243 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKP---R  318 (371)
Q Consensus       243 ~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~---~  318 (371)
                       .+.+++++++++|++||++|++. ++.++++++++ |+++.+|... .....++...++. ++++.|+.......   .
T Consensus       207 -~~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~  282 (330)
T 1tt7_A          207 -DGTLKALSKQQWQGAVDPVGGKQ-LASLLSKIQYG-GSVAVSGLTG-GGEVPATVYPFILRGVSLLGIDSVYCPMDVRA  282 (330)
T ss_dssp             -SSCCCSSCCCCEEEEEESCCTHH-HHHHHTTEEEE-EEEEECCCSS-CSCEEECSHHHHTSCCEEEECCSSSCCHHHHH
T ss_pred             -HHHHHHhhcCCccEEEECCcHHH-HHHHHHhhcCC-CEEEEEecCC-CCccCcchHHHHhcCeEEEEEeccccCHHHHH
Confidence             11123344448999999999965 99999999998 9999999743 3344555555544 89999974322221   2


Q ss_pred             hhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEe
Q 017457          319 SDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM  367 (371)
Q Consensus       319 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~  367 (371)
                      +.++++++++++|++  .++++++|+++++++|++.+.+++.. |+++.+
T Consensus       283 ~~~~~~~~~~~~g~l--~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  330 (330)
T 1tt7_A          283 AVWERMSSDLKPDQL--LTIVDREVSLEETPGALKDILQNRIQGRVIVKL  330 (330)
T ss_dssp             HHHHHTTTTSCCSCS--TTSEEEEECSTTHHHHHHHTTTTCCSSEEEECC
T ss_pred             HHHHHHHHHHhcCCc--ccccceEEcHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            345556666667755  45678999999999999999887654 998863

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=5e-45  Score=339.74  Aligned_cols=303  Identities=15%  Similarity=0.181  Sum_probs=239.2

Q ss_pred             CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457            8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD   87 (371)
Q Consensus         8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~   87 (371)
                      .+++++.|.|+|+++||+|||.+++||++|++.+.|.++... .+|.++|||++|+|+++  ++++|++||+|++...  
T Consensus        17 ~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~-~~p~v~G~E~~G~V~~~--~v~~~~vGdrV~~~~~--   91 (328)
T 1xa0_A           17 TAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVK-TYPFVPGIDLAGVVVSS--QHPRFREGDEVIATGY--   91 (328)
T ss_dssp             EEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCC-SSSBCCCSEEEEEEEEC--CSSSCCTTCEEEEEST--
T ss_pred             eeEEEeccCCCCCCCeEEEEEEEEecCHHHHHhhcCCCCCCC-CCCcccCcceEEEEEec--CCCCCCCCCEEEEccc--
Confidence            578899999999999999999999999999999988754322 68999999999999996  4688999999977531  


Q ss_pred             CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccc
Q 017457           88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG  167 (371)
Q Consensus        88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~  167 (371)
                                            ..|...+                   |+|+||++++++.++++|+++|+++||+++++
T Consensus        92 ----------------------~~g~~~~-------------------G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~  130 (328)
T 1xa0_A           92 ----------------------EIGVTHF-------------------GGYSEYARLHGEWLVPLPKGLTLKEAMAIGTA  130 (328)
T ss_dssp             ----------------------TBTTTBC-------------------CSSBSEEEECGGGCEECCTTCCHHHHHHHHHH
T ss_pred             ----------------------cCCCCCC-------------------ccceeEEEechHHeEECCCCCCHHHhhhhhhh
Confidence                                  0222233                   49999999999999999999999999999999


Q ss_pred             hhhhHHHHH--HHcCCCCCC-eEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccH
Q 017457          168 VSTGVGAAW--KVAGVEVGS-TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTV  243 (371)
Q Consensus       168 ~~ta~~~l~--~~~~~~~g~-~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~  243 (371)
                      +.|||+++.  ...++++|+ +|||+|+ |++|++++|+|+++|+ +|+++++++++++.++++|+++++|+.+   .+ 
T Consensus       131 ~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lGa~~~i~~~~---~~-  205 (328)
T 1xa0_A          131 GFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGAKEVLARED---VM-  205 (328)
T ss_dssp             HHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTCSEEEECC-------
T ss_pred             HHHHHHHHHHHhhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCcEEEecCC---cH-
Confidence            999998764  346788986 9999998 9999999999999999 8999999999999999999999998765   32 


Q ss_pred             HHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHh-cCceEEEeeccCCCc---hh
Q 017457          244 SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGGLKP---RS  319 (371)
Q Consensus       244 ~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~---~~  319 (371)
                      .+.+++++++++|++||++|+.. +..++++++++ |+++.+|... .....++...++ +++++.|+.......   .+
T Consensus       206 ~~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~-G~~v~~G~~~-~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~  282 (328)
T 1xa0_A          206 AERIRPLDKQRWAAAVDPVGGRT-LATVLSRMRYG-GAVAVSGLTG-GAEVPTTVHPFILRGVSLLGIDSVYCPMDLRLR  282 (328)
T ss_dssp             ------CCSCCEEEEEECSTTTT-HHHHHHTEEEE-EEEEECSCCS-SSCCCCCSHHHHHTTCEEEECCSSSCCHHHHHH
T ss_pred             HHHHHHhcCCcccEEEECCcHHH-HHHHHHhhccC-CEEEEEeecC-CCCCCCchhhhhhcCceEEEEecccCCHHHHHH
Confidence            33445555558999999999865 89999999998 9999999743 223444544444 489999874322211   12


Q ss_pred             hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCce-eeEEEEeC
Q 017457          320 DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS-LRCIIWMD  368 (371)
Q Consensus       320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvv~~~  368 (371)
                      .++.++++++++ +.  + ++++|+++++++|++.+.+++. +|+++.++
T Consensus       283 ~~~~~~~~~~~g-l~--~-~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  328 (328)
T 1xa0_A          283 IWERLAGDLKPD-LE--R-IAQEISLAELPQALKRILRGELRGRTVVRLA  328 (328)
T ss_dssp             HHHHHHTTTCCC-HH--H-HEEEEEGGGHHHHHHHHHHTCCCSEEEEECC
T ss_pred             HHHHHHHHHHcC-Cc--e-eeeEeCHHHHHHHHHHHHcCCCCCeEEEEeC
Confidence            345555655556 33  3 3599999999999999988765 49999763

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=3.4e-45  Score=347.07  Aligned_cols=303  Identities=16%  Similarity=0.191  Sum_probs=245.1

Q ss_pred             CCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCC------------------C---------CCCCCccccc
Q 017457            6 GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL------------------P---------KLPLPVIFGH   58 (371)
Q Consensus         6 ~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~------------------~---------~~~~p~~~G~   58 (371)
                      ...++++++|.|+|++|||||||++++||++|++.+.|.++.                  +         ...+|.++||
T Consensus        17 ~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~~~~~~~~~~p~i~G~   96 (379)
T 3iup_A           17 ELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAMRSMAGRLDASMPVGN   96 (379)
T ss_dssp             EEEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHHHHHGGGTTEEEECCS
T ss_pred             CCceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCccccccccccccCCCcccee
Confidence            345899999999999999999999999999999999885210                  0         1157899999


Q ss_pred             cccEEEEEeCCCC-CCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCccc
Q 017457           59 EAVGVVESVGEYV-EEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISS  137 (371)
Q Consensus        59 e~~G~Vv~vG~~v-~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~  137 (371)
                      |++|+|+++|++| ++|++||+|++.+.                                                  |+
T Consensus        97 e~~G~V~~vG~~v~~~~~vGdrV~~~~~--------------------------------------------------G~  126 (379)
T 3iup_A           97 EGAGVVVEAGSSPAAQALMGKTVAAIGG--------------------------------------------------AM  126 (379)
T ss_dssp             CEEEEEEEECSSHHHHTTTTCEEEECCS--------------------------------------------------CC
T ss_pred             eeEEEEEEeCCCcccCCCCCCEEEecCC--------------------------------------------------Cc
Confidence            9999999999999 89999999976432                                                  49


Q ss_pred             ccceeeeecceeEECCCCCCcchhhccccchhhhHHHHHHHcCCCCCCeEEEE--cCChHHHHHHHHHHHcCCCeEEEEc
Q 017457          138 FTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIF--GLGAVGLAVAEGARLNRASKIIGVD  215 (371)
Q Consensus       138 ~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~--G~g~~G~~ai~la~~~g~~~Vi~~~  215 (371)
                      |+||++++++.++++|+++++++||++++.++|||+++ +... ++|++|||+  |+|++|++++|+|+++|+ +|++++
T Consensus       127 ~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~-~~~~-~~g~~vlV~gag~G~vG~~a~q~a~~~Ga-~Vi~~~  203 (379)
T 3iup_A          127 YSQYRCIPADQCLVLPEGATPADGASSFVNPLTALGMV-ETMR-LEGHSALVHTAAASNLGQMLNQICLKDGI-KLVNIV  203 (379)
T ss_dssp             SBSEEEEEGGGEEECCTTCCHHHHTTSSHHHHHHHHHH-HHHH-HTTCSCEEESSTTSHHHHHHHHHHHHHTC-CEEEEE
T ss_pred             ceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHH-HHhc-cCCCEEEEECCCCCHHHHHHHHHHHHCCC-EEEEEE
Confidence            99999999999999999999999999999999999754 4555 899999999  459999999999999999 899999


Q ss_pred             CChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhh-----cC----------C
Q 017457          216 INPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSR-----EG----------W  279 (371)
Q Consensus       216 ~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~-----~~----------~  279 (371)
                      ++++++++++++|+++++|+++   .++.+.+++++++ ++|+||||+|+....+.++++++     ++          .
T Consensus       204 ~~~~~~~~~~~lGa~~~~~~~~---~~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~  280 (379)
T 3iup_A          204 RKQEQADLLKAQGAVHVCNAAS---PTFMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTH  280 (379)
T ss_dssp             SSHHHHHHHHHTTCSCEEETTS---TTHHHHHHHHHHHHCCCEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSC
T ss_pred             CCHHHHHHHHhCCCcEEEeCCC---hHHHHHHHHHhcCCCceEEEECCCchhhHHHHHHhcchhhhccccceeecccccC
Confidence            9999999999999999999988   8899999999988 99999999998775788888885     33          0


Q ss_pred             ceEEEECccCCCCceecCHHHHhcCceEEEeeccCCC---chhh----HHHHHHHHHcCCCCCCCceeEEEecccH--HH
Q 017457          280 GKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLK---PRSD----IATLAQKYLDKELNLGEFITHEVSFHDI--NK  350 (371)
Q Consensus       280 G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~---~~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~  350 (371)
                      |+++.+|... .....+. ..+.+++++.|+.+..+.   ..++    ++++++++.+ .  +.++++++|+|+++  ++
T Consensus       281 g~iv~~G~~~-~~~~~~~-~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--l~~~i~~~~~l~~~~~~~  355 (379)
T 3iup_A          281 KQVYLYGGLD-TSPTEFN-RNFGMAWGMGGWLLFPFLQKIGRERANALKQRVVAELKT-T--FASHYSKEISLAEVLDLD  355 (379)
T ss_dssp             EEEEECCCSE-EEEEEEC-CCSCSCEEEEECCHHHHHHHHCHHHHHHHHHHHHHTTTT-T--TCCCCSEEEEHHHHTCHH
T ss_pred             ceEEEecCCC-CCccccc-cccccceEEEEEEeeeecccCCHHHHHHHHHHHHHHHhc-c--CCCcceEEecHHHhhhHH
Confidence            4555555422 1122232 112337888887655431   1222    3455555555 2  55567899999999  99


Q ss_pred             HHHHHhcCcee-eEEEEeCc
Q 017457          351 AFDLLLEGKSL-RCIIWMDK  369 (371)
Q Consensus       351 a~~~~~~~~~~-kvvv~~~~  369 (371)
                      ||+.+.+++.. |+++.+++
T Consensus       356 A~~~l~~~~~~gKvVv~~~~  375 (379)
T 3iup_A          356 MIAVYNKRATGEKYLINPNK  375 (379)
T ss_dssp             HHHHHTTCCTTCCEEEETTT
T ss_pred             HHHHHhcCCCCceEEEeCCC
Confidence            99999987655 99999875

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=5.8e-44  Score=338.40  Aligned_cols=302  Identities=20%  Similarity=0.230  Sum_probs=243.2

Q ss_pred             CcEE-EEEecCCC-CCCeEEEEEeEeecccccccccccCCC-------------CCCCCCCccccccccEEEEEeCCCCC
Q 017457            8 PLVI-EEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTD-------------LPKLPLPVIFGHEAVGVVESVGEYVE   72 (371)
Q Consensus         8 ~l~~-~~~~~~~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~-------------~~~~~~p~~~G~e~~G~Vv~vG~~v~   72 (371)
                      .+++ +++|.|+| ++|||||||.+++||++|++++.|..+             .....+|.++|||++|+|+++|++|+
T Consensus        35 ~l~~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~~P~v~G~E~~G~V~~vG~~V~  114 (375)
T 2vn8_A           35 VLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVK  114 (375)
T ss_dssp             GCEEEEEECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTTCSBCCCCEEEEEEEEECTTCC
T ss_pred             ceEEeccccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccccCCcccceeeeEEEEEeCCCCC
Confidence            4888 89999985 999999999999999999999988532             11114899999999999999999999


Q ss_pred             CcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEEC
Q 017457           73 EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI  152 (371)
Q Consensus        73 ~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~  152 (371)
                      +|++||+|++.+.                           ...+                   |+|+||++++++.++++
T Consensus       115 ~~~vGDrV~~~~~---------------------------~~~~-------------------G~~aey~~v~~~~~~~i  148 (375)
T 2vn8_A          115 YFKPGDEVWAAVP---------------------------PWKQ-------------------GTLSEFVVVSGNEVSHK  148 (375)
T ss_dssp             SCCTTCEEEEECC---------------------------TTSC-------------------CSSBSEEEEEGGGEEEC
T ss_pred             CCCCCCEEEEecC---------------------------CCCC-------------------ccceeEEEEcHHHeeeC
Confidence            9999999977532                           1112                   49999999999999999


Q ss_pred             CCCCCcchhhccccchhhhHHHHHHHcC----CCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh
Q 017457          153 TPHIPLGIACLLSCGVSTGVGAAWKVAG----VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF  227 (371)
Q Consensus       153 P~~l~~~~aa~~~~~~~ta~~~l~~~~~----~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l  227 (371)
                      |+++++++||+++++++|||+++.+.++    +++|++|||+|+ |++|++++|+|+++|+ +|++++ ++++++.++++
T Consensus       149 P~~ls~~~Aa~l~~~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga-~Vi~~~-~~~~~~~~~~l  226 (375)
T 2vn8_A          149 PKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDA-HVTAVC-SQDASELVRKL  226 (375)
T ss_dssp             CTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHHT
T ss_pred             CCCCCHHHHhhhHHHHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEe-ChHHHHHHHHc
Confidence            9999999999999999999998877788    899999999995 9999999999999999 899988 67899999999


Q ss_pred             CcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCCh-HHHHHHHHHhhcCCceEEEECccCCCCcee--cCH------
Q 017457          228 GITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT-SVMNDAFNSSREGWGKTVILGVEMHGSPIS--LNS------  298 (371)
Q Consensus       228 ga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~--~~~------  298 (371)
                      |+++++|+.+   .++.+.+.+.  +++|++||++|+. ..++.++++++++ |+++.+|.........  ++.      
T Consensus       227 Ga~~v~~~~~---~~~~~~~~~~--~g~D~vid~~g~~~~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~  300 (375)
T 2vn8_A          227 GADDVIDYKS---GSVEEQLKSL--KPFDFILDNVGGSTETWAPDFLKKWSG-ATYVTLVTPFLLNMDRLGIADGMLQTG  300 (375)
T ss_dssp             TCSEEEETTS---SCHHHHHHTS--CCBSEEEESSCTTHHHHGGGGBCSSSC-CEEEESCCSHHHHHHHHCHHHHHHHHH
T ss_pred             CCCEEEECCc---hHHHHHHhhc--CCCCEEEECCCChhhhhHHHHHhhcCC-cEEEEeCCCcccccccccccchhheee
Confidence            9999999877   6777766553  4899999999988 4468889999998 9999998632110000  100      


Q ss_pred             HHHh--------cCceEEEeeccCCCchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCce-eeEEEEe
Q 017457          299 IEIL--------KGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS-LRCIIWM  367 (371)
Q Consensus       299 ~~~~--------~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvv~~  367 (371)
                      ..++        .+..+.....  ....++++++++++++|++.  ++++++|+|+++++|++.+.+++. +|+++++
T Consensus       301 ~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  374 (375)
T 2vn8_A          301 VTVGSKALKHFWKGVHYRWAFF--MASGPCLDDIAELVDAGKIR--PVIEQTFPFSKVPEAFLKVERGHARGKTVINV  374 (375)
T ss_dssp             HHHHHHHHHHHHTTCEEEECCC--CCCHHHHHHHHHHHHTTSCC--CCEEEEEEGGGHHHHHHHHHHCCCSSEEEEEC
T ss_pred             hhhccccccccccCcceEEEEe--CCCHHHHHHHHHHHHCCCcc--cCcCeEECHHHHHHHHHHHHcCCCCCeEEEEe
Confidence            0111        2233333211  12246789999999999765  567899999999999999988765 4999875

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=1.1e-42  Score=327.51  Aligned_cols=301  Identities=15%  Similarity=0.203  Sum_probs=251.2

Q ss_pred             CCcEEEEEecCCC-CCCeEEEEEeEeeccccccccccc----CCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEe
Q 017457            7 KPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKS----STDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVL   81 (371)
Q Consensus         7 ~~l~~~~~~~~~~-~~~eVlVkv~~~~i~~~D~~~~~g----~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~   81 (371)
                      ..++++++|.|+| ++|||||||.+++||++|++.+.+    .+..+ ..+|.++|||++|+|++  ++|++|++||+|+
T Consensus        27 ~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~-~~~p~v~G~E~~G~V~~--~~v~~~~vGdrV~  103 (357)
T 2zb4_A           27 ENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITP-WQLSQVVDGGGIGIIEE--SKHTNLTKGDFVT  103 (357)
T ss_dssp             GGEEEEEEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSSCC-CCBTSBCEEEEEEEEEE--ECSTTCCTTCEEE
T ss_pred             CceEEEeecCCCCCCCCeEEEEEEEEecCHHHHhhccccccccccCC-CCCCccccccEEEEEEe--cCCCCCCCCCEEE
Confidence            4599999999999 999999999999999999887765    22211 26788999999999999  8899999999996


Q ss_pred             eccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCC-----
Q 017457           82 PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI-----  156 (371)
Q Consensus        82 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l-----  156 (371)
                      +..                                                   |+|+||++++++.++++|+++     
T Consensus       104 ~~~---------------------------------------------------G~~aey~~v~~~~~~~iP~~~~~~~~  132 (357)
T 2zb4_A          104 SFY---------------------------------------------------WPWQTKVILDGNSLEKVDPQLVDGHL  132 (357)
T ss_dssp             EEE---------------------------------------------------EESBSEEEEEGGGCEECCGGGGTTCG
T ss_pred             ecC---------------------------------------------------CCcEEEEEEchHHceecCcccccCch
Confidence            531                                                   389999999999999999999     


Q ss_pred             CcchhhccccchhhhHHHHHHHcCCCCC--CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcceE
Q 017457          157 PLGIACLLSCGVSTGVGAAWKVAGVEVG--STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDF  232 (371)
Q Consensus       157 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g--~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v  232 (371)
                      +++ +++++++++|||+++.+.+++++|  ++|||+|+ |++|++++|+++..|+++|+++++++++++.+++ +|++++
T Consensus       133 ~~~-~a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~  211 (357)
T 2zb4_A          133 SYF-LGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAA  211 (357)
T ss_dssp             GGG-GTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEE
T ss_pred             hHH-HHhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceE
Confidence            555 677888999999988788999999  99999998 9999999999999998789999999999999887 999999


Q ss_pred             EcCCCCCCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCC-CceecC-------HHHHh-c
Q 017457          233 INPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG-SPISLN-------SIEIL-K  303 (371)
Q Consensus       233 ~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-~~~~~~-------~~~~~-~  303 (371)
                      +|+.+   .++.+.+.+.+++++|++||++|+.. ++.++++++++ |+++.+|..... ...+++       ...++ +
T Consensus       212 ~d~~~---~~~~~~~~~~~~~~~d~vi~~~G~~~-~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (357)
T 2zb4_A          212 INYKK---DNVAEQLRESCPAGVDVYFDNVGGNI-SDTVISQMNEN-SHIILCGQISQYNKDVPYPPPLSPAIEAIQKER  286 (357)
T ss_dssp             EETTT---SCHHHHHHHHCTTCEEEEEESCCHHH-HHHHHHTEEEE-EEEEECCCGGGTTSCCCSSCCCCHHHHHHHHHH
T ss_pred             EecCc---hHHHHHHHHhcCCCCCEEEECCCHHH-HHHHHHHhccC-cEEEEECCccccccCccccccchhhhhhhhhcc
Confidence            99877   78888888888768999999999755 89999999998 999999974321 122221       12333 4


Q ss_pred             CceEEEeeccCCC--chhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCce-eeEEEEeCc
Q 017457          304 GRSVCGTYFGGLK--PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS-LRCIIWMDK  369 (371)
Q Consensus       304 ~~~~~g~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvv~~~~  369 (371)
                      ++++.|+....+.  ..++++++++++++|++.+.  ....|+|+++++|++.+.+++. +|+++.+++
T Consensus       287 ~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  353 (357)
T 2zb4_A          287 NITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIK--ETVINGLENMGAAFQSMMTGGNIGKQIVCISE  353 (357)
T ss_dssp             TCEEEECCGGGGGGGHHHHHHHHHHHHHTTCCCCC--EEEEECGGGHHHHHHHHHTTCCSBEEEEECCC
T ss_pred             eeEEEEeehhhhhHHHHHHHHHHHHHHHcCCCcCc--cceecCHHHHHHHHHHHHcCCCCceEEEEEec
Confidence            8999998654322  14568999999999988766  3356999999999999988765 499998864

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=6.2e-44  Score=365.65  Aligned_cols=295  Identities=18%  Similarity=0.190  Sum_probs=249.4

Q ss_pred             CcEEEEEe--cCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccC
Q 017457            8 PLVIEEIE--VEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH   85 (371)
Q Consensus         8 ~l~~~~~~--~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~   85 (371)
                      .+++.+.|  .|+|++|||+|||.+++||++|+++..|.++     .|.++|||++|+|+++|++|++|++||+|+....
T Consensus       223 ~L~~~~~~~p~~~~~~~eVlV~V~a~gin~~D~~~~~G~~~-----~~~~lG~E~aG~V~~vG~~V~~~~vGDrV~~~~~  297 (795)
T 3slk_A          223 GLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYP-----GVASLGSEGAGVVVETGPGVTGLAPGDRVMGMIP  297 (795)
T ss_dssp             TEEECCCHHHHSCCCSSEEEEEEEEEEECHHHHHHTTTCCS-----SCCCSCCCEEEEEEEECSSCCSSCTTCEEEECCS
T ss_pred             ceEEEeCCccCCCCCCCEEEEEEEEEccCHHHHHHHcCCCC-----CCccccceeEEEEEEeCCCCCcCCCCCEEEEEec
Confidence            46777766  3678999999999999999999999998764     3457999999999999999999999999965321


Q ss_pred             CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccc
Q 017457           86 RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLS  165 (371)
Q Consensus        86 ~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~  165 (371)
                                                                        |+|++|++++++.++++|+++|+++||+++
T Consensus       298 --------------------------------------------------G~~ae~~~v~~~~~~~iP~~ls~~~AA~l~  327 (795)
T 3slk_A          298 --------------------------------------------------KAFGPLAVADHRMVTRIPAGWSFARAASVP  327 (795)
T ss_dssp             --------------------------------------------------SCSSSEEEEETTSEEECCTTCCHHHHHHHH
T ss_pred             --------------------------------------------------CCCcCEEEeehHHEEECCCCCCHHHHHhhh
Confidence                                                              489999999999999999999999999999


Q ss_pred             cchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHH
Q 017457          166 CGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVS  244 (371)
Q Consensus       166 ~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~  244 (371)
                      ++++|||+++.+.+++++|++|||+|+ |++|++++|+||++|+ +|+++++++ +.+.++ +|+++++++++   .++.
T Consensus       328 ~~~~Ta~~al~~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga-~V~~t~~~~-k~~~l~-lga~~v~~~~~---~~~~  401 (795)
T 3slk_A          328 IVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGA-EVYATASED-KWQAVE-LSREHLASSRT---CDFE  401 (795)
T ss_dssp             HHHHHHHCCCCCCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTC-CEEEECCGG-GGGGSC-SCGGGEECSSS---STHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeChH-Hhhhhh-cChhheeecCC---hhHH
Confidence            999999999888899999999999997 9999999999999999 899999665 666665 99999999988   8999


Q ss_pred             HHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCC---chhh
Q 017457          245 QVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLK---PRSD  320 (371)
Q Consensus       245 ~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~---~~~~  320 (371)
                      +.+++.|++ |+|+|||++++.. ++.++++++++ |+++.+|.........  ......+.++.+..+....   ..+.
T Consensus       402 ~~i~~~t~g~GvDvVld~~gg~~-~~~~l~~l~~~-Gr~v~iG~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~  477 (795)
T 3slk_A          402 QQFLGATGGRGVDVVLNSLAGEF-ADASLRMLPRG-GRFLELGKTDVRDPVE--VADAHPGVSYQAFDTVEAGPQRIGEM  477 (795)
T ss_dssp             HHHHHHSCSSCCSEEEECCCTTT-THHHHTSCTTC-EEEEECCSTTCCCHHH--HHHHSSSEEEEECCGGGGHHHHHHHH
T ss_pred             HHHHHHcCCCCeEEEEECCCcHH-HHHHHHHhcCC-CEEEEeccccccCccc--ccccCCCCEEEEeeccccCHHHHHHH
Confidence            999999998 9999999999877 89999999998 9999999643222111  1222346777766543211   1356


Q ss_pred             HHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEeCc
Q 017457          321 IATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDK  369 (371)
Q Consensus       321 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~~~  369 (371)
                      ++++++++++|++.+  +++++|+++++++||+.+.+++.. |+|+.+.+
T Consensus       478 l~~~~~l~~~g~l~p--~~~~~~~l~~~~eA~~~l~~g~~~GKvVl~~~~  525 (795)
T 3slk_A          478 LHELVELFEGRVLEP--LPVTAWDVRQAPEALRHLSQARHVGKLVLTMPP  525 (795)
T ss_dssp             HHHHHHHHHTTSCCC--CCEEEEEGGGHHHHHHHHHHTCCCBEEEEECCC
T ss_pred             HHHHHHHHHcCCcCC--CcceeEcHHHHHHHHHHHhcCCccceEEEecCc
Confidence            889999999997764  467999999999999999988776 99998754

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=1.4e-42  Score=319.59  Aligned_cols=288  Identities=18%  Similarity=0.250  Sum_probs=233.5

Q ss_pred             cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457            4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI   83 (371)
Q Consensus         4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~   83 (371)
                      .++....+++.|.|+|+++||+|||.+++||++|++++.|.++... .+|.++|||++|+|+           ||+|+..
T Consensus         8 ~~g~~~~l~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~-~~p~i~G~e~~G~V~-----------GdrV~~~   75 (302)
T 1iz0_A            8 RLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRL-HPPFIPGMEVVGVVE-----------GRRYAAL   75 (302)
T ss_dssp             STTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCC-CSSBCCCCEEEEEET-----------TEEEEEE
T ss_pred             CCCCchheEECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCC-CCCCcccceEEEEEE-----------CcEEEEe
Confidence            3444445678899999999999999999999999999998765422 689999999999997           9999664


Q ss_pred             cCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhc
Q 017457           84 FHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL  163 (371)
Q Consensus        84 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~  163 (371)
                      ..                              +                   |+|+||+.++++.++++|+++++++||+
T Consensus        76 ~~------------------------------~-------------------G~~aey~~v~~~~~~~iP~~~~~~~aa~  106 (302)
T 1iz0_A           76 VP------------------------------Q-------------------GGLAERVAVPKGALLPLPEGLSPEEAAA  106 (302)
T ss_dssp             CS------------------------------S-------------------CCSBSEEEEEGGGCEECCTTCCHHHHHT
T ss_pred             cC------------------------------C-------------------cceeeEEEEcHHHcEeCCCCCCHHHHHH
Confidence            21                              2                   4999999999999999999999999999


Q ss_pred             cccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457          164 LSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT  242 (371)
Q Consensus       164 ~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~  242 (371)
                      +++++.|||+++.+.. +++|++|||+|+ |++|++++|+|+++|+ +|+++++++++++.++++|+++++|+.+  ..+
T Consensus       107 l~~~~~ta~~~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~~~~~--~~~  182 (302)
T 1iz0_A          107 FPVSFLTAYLALKRAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAATYAE--VPE  182 (302)
T ss_dssp             SHHHHHHHHHHHHHTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEEGGG--HHH
T ss_pred             hhhHHHHHHHHHHHhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEECCc--chh
Confidence            9999999999887677 999999999998 9999999999999999 9999999999999999999999987532  012


Q ss_pred             HHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCC-Cchhh
Q 017457          243 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGL-KPRSD  320 (371)
Q Consensus       243 ~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~-~~~~~  320 (371)
                      +.+.+     +++|++|| +|+.. ++.++++++++ |+++.+|..... ...++...++. ++++.|+.+..+ ...++
T Consensus       183 ~~~~~-----~~~d~vid-~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  253 (302)
T 1iz0_A          183 RAKAW-----GGLDLVLE-VRGKE-VEESLGLLAHG-GRLVYIGAAEGE-VAPIPPLRLMRRNLAVLGFWLTPLLREGAL  253 (302)
T ss_dssp             HHHHT-----TSEEEEEE-CSCTT-HHHHHTTEEEE-EEEEEC--------CCCCTTHHHHTTCEEEECCHHHHTTCHHH
T ss_pred             HHHHh-----cCceEEEE-CCHHH-HHHHHHhhccC-CEEEEEeCCCCC-CCCcCHHHHHhCCCeEEEEeccchhhhHHH
Confidence            33322     48999999 99855 89999999998 999999874322 22344444444 899999865322 12467


Q ss_pred             HHHHHH---HHHcCCCCCCCceeEEEecccHHHHHHHHhcCce-eeEEEEe
Q 017457          321 IATLAQ---KYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS-LRCIIWM  367 (371)
Q Consensus       321 ~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvv~~  367 (371)
                      ++++++   ++++|++.  +.++++|+++++++|++.+.+++. +|+++.+
T Consensus       254 ~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  302 (302)
T 1iz0_A          254 VEEALGFLLPRLGRELR--PVVGPVFPFAEAEAAFRALLDRGHTGKVVVRL  302 (302)
T ss_dssp             HHHHHHHHGGGBTTTBC--CCEEEEEEGGGHHHHHHHTTCTTCCBEEEEEC
T ss_pred             HHHHHhhhHHHHcCCcc--cccceEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            889999   99999764  558899999999999999988765 4998863

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=1.9e-40  Score=311.05  Aligned_cols=301  Identities=19%  Similarity=0.198  Sum_probs=242.3

Q ss_pred             CcEEE--EEecCC-CCCCeEEEEEeEeecccccccccccCCCCCC--CCCCccccccccEEEEE--eCCCCCCcCCCCEE
Q 017457            8 PLVIE--EIEVEP-PKAWEIRIKILCTSLCHSDVTFWKSSTDLPK--LPLPVIFGHEAVGVVES--VGEYVEEVKERDLV   80 (371)
Q Consensus         8 ~l~~~--~~~~~~-~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~--~~~p~~~G~e~~G~Vv~--vG~~v~~~~~Gd~V   80 (371)
                      .++++  ++|.|. |++|||||||.++++|+.|. ...|.+....  ..+|.++|||++|++++  +|+++++|++||+|
T Consensus        22 ~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~e~~G~~~~GvV~~~v~~~~vGdrV  100 (345)
T 2j3h_A           22 DFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQPIQGYGVSRIIESGHPDYKKGDLL  100 (345)
T ss_dssp             GEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC---------CCCCTTSBCEEEEEEEEEEECSTTCCTTCEE
T ss_pred             ceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCCeeecceEEEEEecCCCCCCCCCEE
Confidence            58888  888886 89999999999999888774 4455432210  14688999999999999  99999999999999


Q ss_pred             eeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecce--eEECCC---C
Q 017457           81 LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITH--VVKITP---H  155 (371)
Q Consensus        81 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~--~~~~P~---~  155 (371)
                      +..                                                    |+|+||++++++.  ++++|+   +
T Consensus       101 ~~~----------------------------------------------------g~~aey~~v~~~~~~~~~ip~~~~~  128 (345)
T 2j3h_A          101 WGI----------------------------------------------------VAWEEYSVITPMTHAHFKIQHTDVP  128 (345)
T ss_dssp             EEE----------------------------------------------------EESBSEEEECCCTTTCEEECCCSSC
T ss_pred             Eee----------------------------------------------------cCceeEEEecccccceeecCCCCCC
Confidence            552                                                    3899999999876  999996   3


Q ss_pred             CCcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhCcceEE
Q 017457          156 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFI  233 (371)
Q Consensus       156 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga~~v~  233 (371)
                      ++++ +|+++++++|||+++.+..++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.++ ++|+++++
T Consensus       129 ~~~~-aa~l~~~~~ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~~  206 (345)
T 2j3h_A          129 LSYY-TGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGC-YVVGSAGSKEKVDLLKTKFGFDDAF  206 (345)
T ss_dssp             TTGG-GTTTSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTSCCSEEE
T ss_pred             HHHH-HHhccccHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCceEE
Confidence            5555 67788899999998877889999999999997 9999999999999999 9999999999999998 79999998


Q ss_pred             cCCCCCCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCC----CceecCHHHHhc-CceEE
Q 017457          234 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG----SPISLNSIEILK-GRSVC  308 (371)
Q Consensus       234 ~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~----~~~~~~~~~~~~-~~~~~  308 (371)
                      |+.+  ..++.+.+++.+++++|++||++|+.. ++.++++++++ |+++.+|.....    ....++...++. ++++.
T Consensus       207 d~~~--~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~  282 (345)
T 2j3h_A          207 NYKE--ESDLTAALKRCFPNGIDIYFENVGGKM-LDAVLVNMNMH-GRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQ  282 (345)
T ss_dssp             ETTS--CSCSHHHHHHHCTTCEEEEEESSCHHH-HHHHHTTEEEE-EEEEECCCGGGTTCSSCCCBSCTTHHHHHTCEEE
T ss_pred             ecCC--HHHHHHHHHHHhCCCCcEEEECCCHHH-HHHHHHHHhcC-CEEEEEccccccccCCccccccHHHHhhhceeec
Confidence            8765  136777788777568999999999854 89999999998 999999874321    123344444444 88999


Q ss_pred             EeeccCCC--chhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEeCc
Q 017457          309 GTYFGGLK--PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDK  369 (371)
Q Consensus       309 g~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~~~  369 (371)
                      |+....+.  ..+.++++++++++|++.  +++.++|+|+++++|++.+.+++.. |+++.+++
T Consensus       283 g~~~~~~~~~~~~~~~~~~~l~~~g~i~--~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~  344 (345)
T 2j3h_A          283 GFVVSDFYDKYSKFLEFVLPHIREGKIT--YVEDVADGLEKAPEALVGLFHGKNVGKQVVVVAR  344 (345)
T ss_dssp             ECCGGGGGGGHHHHHHHHHHHHHTTSSC--CCEEEEESGGGSHHHHHHHHTTCCSSEEEEESSC
T ss_pred             eeeehhhhhhHHHHHHHHHHHHHCCCCc--CcccccCCHHHHHHHHHHHHcCCCceEEEEEeCC
Confidence            87654322  123488999999999776  3566789999999999999887655 99998754

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=1e-39  Score=304.49  Aligned_cols=294  Identities=20%  Similarity=0.224  Sum_probs=240.1

Q ss_pred             CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCC
Q 017457            7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHR   86 (371)
Q Consensus         7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~   86 (371)
                      +.++++++|.|+|++|||||||.+++||+.|... .   ...  .+|.++|||++|+|++.  ++++|++||+|++.   
T Consensus        24 ~~l~~~e~~~P~~~~~eVlVkv~a~gi~~~~~~~-~---~~~--~~p~~~g~e~~G~Vv~~--~v~~~~vGdrV~~~---   92 (333)
T 1v3u_A           24 SDFELKTVELPPLKNGEVLLEALFLSVDPYMRIA-S---KRL--KEGAVMMGQQVARVVES--KNSAFPAGSIVLAQ---   92 (333)
T ss_dssp             GGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHH-T---TTC--CTTSBCCCCEEEEEEEE--SCTTSCTTCEEEEC---
T ss_pred             cceEEEeCCCCCCCCCEEEEEEEEeccCHHHccc-c---CcC--CCCcccccceEEEEEec--CCCCCCCCCEEEec---
Confidence            4589999999999999999999999999987621 1   111  57788999999999995  57889999999552   


Q ss_pred             CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCC----CCcch-h
Q 017457           87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH----IPLGI-A  161 (371)
Q Consensus        87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~----l~~~~-a  161 (371)
                                                                       |+|+||+++++++++++|++    +++++ +
T Consensus        93 -------------------------------------------------g~~aey~~v~~~~~~~iP~~~~~~~~~~~a~  123 (333)
T 1v3u_A           93 -------------------------------------------------SGWTTHFISDGKGLEKLLTEWPDKLPLSLAL  123 (333)
T ss_dssp             -------------------------------------------------CCSBSEEEESSTTEEECC--CCTTSCGGGGG
T ss_pred             -------------------------------------------------CceEEEEEechHHeEEcCcccccCCCHHHHH
Confidence                                                             38999999999999999997    88887 4


Q ss_pred             hccccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCC
Q 017457          162 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD  240 (371)
Q Consensus       162 a~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~  240 (371)
                      ++++++++|||+++.+..++++|++|||+|+ |++|++++|+++..|+ +|+++++++++++.++++|+++++|..+  .
T Consensus       124 a~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~~g~~~~~d~~~--~  200 (333)
T 1v3u_A          124 GTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIGFDAAFNYKT--V  200 (333)
T ss_dssp             TTTSHHHHHHHHHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTS--C
T ss_pred             HHhCChHHHHHHHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCcEEEecCC--H
Confidence            7888899999998878889999999999998 9999999999999999 9999999999999999999998888653  1


Q ss_pred             ccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCC----c-eecCHHHHhc-CceEEEeeccC
Q 017457          241 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGS----P-ISLNSIEILK-GRSVCGTYFGG  314 (371)
Q Consensus       241 ~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~----~-~~~~~~~~~~-~~~~~g~~~~~  314 (371)
                      +++.+.+.+.+++++|++||++|+.. ++.++++++++ |+++.+|......    . ...+...++. ++++.|+....
T Consensus       201 ~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~  278 (333)
T 1v3u_A          201 NSLEEALKKASPDGYDCYFDNVGGEF-LNTVLSQMKDF-GKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYR  278 (333)
T ss_dssp             SCHHHHHHHHCTTCEEEEEESSCHHH-HHHHHTTEEEE-EEEEECCCCC-------CCBCCCHHHHHHTTCEEEECCGGG
T ss_pred             HHHHHHHHHHhCCCCeEEEECCChHH-HHHHHHHHhcC-CEEEEEeccccccCCCCCCCCcCHHHHhhcCceEEEEehhh
Confidence            46777888877668999999999866 89999999998 9999999743211    1 1124444444 89999986544


Q ss_pred             CC---chhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEe
Q 017457          315 LK---PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM  367 (371)
Q Consensus       315 ~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~  367 (371)
                      +.   ..++++++++++++|++.+...  ..++|+++++|++.+.+++.. |+++.+
T Consensus       279 ~~~~~~~~~~~~~~~l~~~g~l~~~~~--~~~~l~~~~~A~~~~~~~~~~gKvvl~~  333 (333)
T 1v3u_A          279 WQGDVREKALRDLMKWVLEGKIQYHEH--VTKGFENMPAAFIEMLNGANLGKAVVTA  333 (333)
T ss_dssp             CCTHHHHHHHHHHHHHHHTTSSCCCEE--EEECGGGHHHHHHHHHTTCCSBEEEEEC
T ss_pred             cchHHHHHHHHHHHHHHHCCCccCccc--cccCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            32   1356788999999998876633  457999999999999887654 998864

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=100.00  E-value=5.2e-33  Score=312.04  Aligned_cols=293  Identities=15%  Similarity=0.124  Sum_probs=234.9

Q ss_pred             cEEEEEecCC-CC--CCeEEEEEeEeecccccccccccCCCCCC-----CCCCccccccccEEEEEeCCCCCCcCCCCEE
Q 017457            9 LVIEEIEVEP-PK--AWEIRIKILCTSLCHSDVTFWKSSTDLPK-----LPLPVIFGHEAVGVVESVGEYVEEVKERDLV   80 (371)
Q Consensus         9 l~~~~~~~~~-~~--~~eVlVkv~~~~i~~~D~~~~~g~~~~~~-----~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V   80 (371)
                      +.+.+.+..+ +.  ++||+|||.++++|+.|+++..|.++...     ...|.++|+|++|+|          ++||+|
T Consensus      1544 l~~~~~~~~~~~~l~~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V----------~vGdrV 1613 (2512)
T 2vz8_A         1544 IRWVCSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRD----------ASGRRV 1613 (2512)
T ss_dssp             EEEEECTTTTCCCHHHHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEE----------TTSCCE
T ss_pred             eEEEecCcccccCCCCCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEE----------ccCCEE
Confidence            4555544322 23  79999999999999999999998764220     134568999999987          379999


Q ss_pred             eeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcch
Q 017457           81 LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI  160 (371)
Q Consensus        81 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~  160 (371)
                      +...                              ..                   |+|++|++++++.++++|+++++++
T Consensus      1614 ~g~~------------------------------~~-------------------G~~Aeyv~vp~~~v~~iPd~ls~~e 1644 (2512)
T 2vz8_A         1614 MGMV------------------------------PA-------------------EGLATSVLLLQHATWEVPSTWTLEE 1644 (2512)
T ss_dssp             EEEC------------------------------SS-------------------CCSBSEEECCGGGEEECCTTSCHHH
T ss_pred             EEee------------------------------cC-------------------CceeeEEEcccceEEEeCCCCCHHH
Confidence            5532                              22                   3899999999999999999999999


Q ss_pred             hhccccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcceEEcC
Q 017457          161 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINP  235 (371)
Q Consensus       161 aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~v~~~  235 (371)
                      ||+++++++|||+++...+++++|++|||+|+ |++|++++|+||++|+ +|+++++++++++.+++    +|+++++++
T Consensus      1645 AA~lp~~~~TA~~al~~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga-~Viat~~s~~k~~~l~~~~~~lga~~v~~~ 1723 (2512)
T 2vz8_A         1645 AASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGC-RVFTTVGSAEKRAYLQARFPQLDETCFANS 1723 (2512)
T ss_dssp             HTTSHHHHHHHHHHHTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTCCSTTEEES
T ss_pred             HHHhHHHHHHHHHHHHHHhcCCCCCEEEEEeCChHHHHHHHHHHHHcCC-EEEEEeCChhhhHHHHhhcCCCCceEEecC
Confidence            99999999999999888889999999999987 9999999999999999 99999999999999886    788999998


Q ss_pred             CCCCCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccC
Q 017457          236 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGG  314 (371)
Q Consensus       236 ~~~~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~  314 (371)
                      ++   .++.+.+++.+++ |+|+|||++++.. ++.++++++++ |+++.+|..............+.+++++.++.+..
T Consensus      1724 ~~---~~~~~~i~~~t~g~GvDvVld~~g~~~-l~~~l~~L~~~-Gr~V~iG~~~~~~~~~~~~~~~~~~~~~~g~~l~~ 1798 (2512)
T 2vz8_A         1724 RD---TSFEQHVLRHTAGKGVDLVLNSLAEEK-LQASVRCLAQH-GRFLEIGKFDLSNNHALGMAVFLKNVTFHGILLDS 1798 (2512)
T ss_dssp             SS---SHHHHHHHHTTTSCCEEEEEECCCHHH-HHHHHTTEEEE-EEEEECCCHHHHTTCEEEGGGGGGCCEEEECCGGG
T ss_pred             CC---HHHHHHHHHhcCCCCceEEEECCCchH-HHHHHHhcCCC-cEEEEeecccccccCcccccccccCCcEEEeeHHH
Confidence            87   7899999999988 9999999998655 99999999998 99999985321111222233344588999876543


Q ss_pred             CC--chhhHHHHHHHHH----cCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEeC
Q 017457          315 LK--PRSDIATLAQKYL----DKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMD  368 (371)
Q Consensus       315 ~~--~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~~  368 (371)
                      +.  ..+.++++++++.    +|++.  ++++++|+++++++|++.+.+++.. |+|+.++
T Consensus      1799 ~~~~~~~~~~~~l~~l~~~~~~g~l~--p~i~~~f~l~ei~eA~~~l~~g~~~GKvVi~~~ 1857 (2512)
T 2vz8_A         1799 LFEEGGATWQEVSELLKAGIQEGVVQ--PLKCTVFPRTKVEAAFRYMAQGKHIGKVVIQVR 1857 (2512)
T ss_dssp             TTSSCCHHHHHHHHHHHHHHTTTCSC--CCCEEEEESSTHHHHHHHHHTTCCSSEEEEECS
T ss_pred             HhhhCHHHHHHHHHHHHHHHHcCCcC--CCcceEecHHHHHHHHHhhhccCccceEEEECC
Confidence            21  1234555555554    56444  4578999999999999999987765 9999875

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.89  E-value=1.1e-22  Score=174.93  Aligned_cols=184  Identities=21%  Similarity=0.219  Sum_probs=139.0

Q ss_pred             ceeEECCCCCCcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 017457          147 THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK  225 (371)
Q Consensus       147 ~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~  225 (371)
                      +.++++|+++|+++||++++++.|||+++.+..++++|++|||+|+ |++|++++++++..|+ +|+++++++++.+.++
T Consensus         2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~   80 (198)
T 1pqw_A            2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLS   80 (198)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHH
T ss_pred             CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence            4688999999999999999999999998877788999999999996 9999999999999999 9999999999999999


Q ss_pred             HhCcceEEcCCCCCCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcC
Q 017457          226 KFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKG  304 (371)
Q Consensus       226 ~lga~~v~~~~~~~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~  304 (371)
                      ++|++.++|..+   .++.+.+.+.+.+ ++|++||++|... ++.++++++++ |+++.+|.........++...+.++
T Consensus        81 ~~g~~~~~d~~~---~~~~~~~~~~~~~~~~D~vi~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~  155 (198)
T 1pqw_A           81 RLGVEYVGDSRS---VDFADEILELTDGYGVDVVLNSLAGEA-IQRGVQILAPG-GRFIELGKKDVYADASLGLAALAKS  155 (198)
T ss_dssp             TTCCSEEEETTC---STHHHHHHHHTTTCCEEEEEECCCTHH-HHHHHHTEEEE-EEEEECSCGGGTTTCEEEGGGGTTT
T ss_pred             HcCCCEEeeCCc---HHHHHHHHHHhCCCCCeEEEECCchHH-HHHHHHHhccC-CEEEEEcCCCCcCcCcCChhHhcCC
Confidence            999988888776   6788888887766 8999999998655 89999999998 9999999744212223333333347


Q ss_pred             ceEEEeec------cCCCchhhHHHHHHHHHcCCCCCC
Q 017457          305 RSVCGTYF------GGLKPRSDIATLAQKYLDKELNLG  336 (371)
Q Consensus       305 ~~~~g~~~------~~~~~~~~~~~~~~~~~~g~~~~~  336 (371)
                      +++.+..+      ......+.++++++++++|++.+.
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~  193 (198)
T 1pqw_A          156 ASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVL  193 (198)
T ss_dssp             CEEEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCC
T ss_pred             cEEEEEehHHhhccCHHHHHHHHHHHHHHHHcCCccCC
Confidence            78876532      110013568899999999988764

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=99.17  E-value=3.3e-11  Score=106.49  Aligned_cols=167  Identities=16%  Similarity=0.074  Sum_probs=110.6

Q ss_pred             cCCCCEEeecc-------CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeec
Q 017457           74 VKERDLVLPIF-------HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI  146 (371)
Q Consensus        74 ~~~Gd~V~~~~-------~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~  146 (371)
                      +++||+|++.+       ...||.|.+|+.|..+.|+..+.       ..|                   +..      +
T Consensus         4 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~G~~~~~~~~g~-------~~G-------------------~~~------~   51 (248)
T 2yvl_A            4 FKEGEYVLIRFGEKKFLRKLLPKQSLSVKKSVLKFDEVIGK-------PEG-------------------VKI------N   51 (248)
T ss_dssp             CCTTCEEEEEETTEEEEEECCTTCEEEETTEEEEGGGTTTC-------CTT-------------------EEE------T
T ss_pred             CCCCCEEEEEeCCeEEEEEEcCCCEEecCCceEEHHHhcCC-------CCC-------------------CEE------E
Confidence            89999999988       77889999998888888865431       011                   211      3


Q ss_pred             ceeEECCCCCCcchhhcccc----chhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHH
Q 017457          147 THVVKITPHIPLGIACLLSC----GVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFE  222 (371)
Q Consensus       147 ~~~~~~P~~l~~~~aa~~~~----~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~  222 (371)
                      ...++.|+...+.+.+....    ....+.+ +.....+.++++||.+|+| .|..+..+++. +. +|++++.+++..+
T Consensus        52 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~vldiG~G-~G~~~~~l~~~-~~-~v~~vD~~~~~~~  127 (248)
T 2yvl_A           52 GFEVYRPTLEEIILLGFERKTQIIYPKDSFY-IALKLNLNKEKRVLEFGTG-SGALLAVLSEV-AG-EVWTFEAVEEFYK  127 (248)
T ss_dssp             TEEEECCCHHHHHHHTSCCSSCCCCHHHHHH-HHHHTTCCTTCEEEEECCT-TSHHHHHHHHH-SS-EEEEECSCHHHHH
T ss_pred             EEEEeCCCHHHHHHhcCcCCCCcccchhHHH-HHHhcCCCCCCEEEEeCCC-ccHHHHHHHHh-CC-EEEEEecCHHHHH
Confidence            44455554332222211100    1122222 4456778899999999998 59999999988 76 9999999999888


Q ss_pred             HHHHh----Cc-c--eEEcCCCCCCccHHHHHHHhh-C-CCcCEEEECCCCh-HHHHHHHHHhhcCCceEEEECc
Q 017457          223 IGKKF----GI-T--DFINPATCGDKTVSQVIKEMT-D-GGADYCFECIGLT-SVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       223 ~~~~l----ga-~--~v~~~~~~~~~~~~~~i~~~~-~-gg~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      .+++.    +. .  .++..      ++.    +.. . +++|+|+...+.+ ..++.+.+.|+++ |+++....
T Consensus       128 ~a~~~~~~~~~~~~~~~~~~------d~~----~~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  191 (248)
T 2yvl_A          128 TAQKNLKKFNLGKNVKFFNV------DFK----DAEVPEGIFHAAFVDVREPWHYLEKVHKSLMEG-APVGFLLP  191 (248)
T ss_dssp             HHHHHHHHTTCCTTEEEECS------CTT----TSCCCTTCBSEEEECSSCGGGGHHHHHHHBCTT-CEEEEEES
T ss_pred             HHHHHHHHcCCCCcEEEEEc------Chh----hcccCCCcccEEEECCcCHHHHHHHHHHHcCCC-CEEEEEeC
Confidence            87663    32 1  22221      111    111 2 3799999887765 5689999999998 99887753

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.93  E-value=3.1e-11  Score=114.58  Aligned_cols=181  Identities=14%  Similarity=0.128  Sum_probs=126.8

Q ss_pred             ccccccccEEEEEeCCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeeccc
Q 017457           54 VIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFL  133 (371)
Q Consensus        54 ~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~  133 (371)
                      ...|++.++.|..+|++++++.+|+.++.-...                        .++.                ...
T Consensus        75 ~~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk------------------------~~~~----------------~~~  114 (404)
T 1gpj_A           75 VKRGSEAVRHLFRVASGLESMMVGEQEILRQVK------------------------KAYD----------------RAA  114 (404)
T ss_dssp             EEEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHH------------------------HHHH----------------HHH
T ss_pred             eecCchHhhhheeeccCCCCCcCCcchhHHHHH------------------------HHHH----------------HHH
Confidence            467999999999999999999999987431100                        0000                000


Q ss_pred             CcccccceeeeecceeEECCCCCCcchhhccccchhhhHHHHHHHc---CCCCCCeEEEEcCChHHHHHHHHHHHcCCCe
Q 017457          134 NISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVA---GVEVGSTVAIFGLGAVGLAVAEGARLNRASK  210 (371)
Q Consensus       134 ~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~---~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~  210 (371)
                      ..|++++|+......++++|++++.+.++.. .+..++|.++....   .-.+|++|+|+|+|.+|.++++.++..|+++
T Consensus       115 ~~G~~~~~~~~~~~~a~~~~k~v~~~~~~~~-~~~s~a~~av~~a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~  193 (404)
T 1gpj_A          115 RLGTLDEALKIVFRRAINLGKRAREETRISE-GAVSIGSAAVELAERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRA  193 (404)
T ss_dssp             HHTCCCHHHHHHHHHHHHHHHHHHHHSSTTC-SCCSHHHHHHHHHHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSE
T ss_pred             HcCCchHHHHHHHHHHhhhhccCcchhhhcC-CCccHHHHHHHHHHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCE
Confidence            0136788888888889999998887776654 36777877543222   1257999999999999999999999999888


Q ss_pred             EEEEcCChhHH-HHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCChHHH--HHHHHH--h--hcCCceEE
Q 017457          211 IIGVDINPEKF-EIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVM--NDAFNS--S--REGWGKTV  283 (371)
Q Consensus       211 Vi~~~~~~~~~-~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~~~~~--~~~~~~--l--~~~~G~~v  283 (371)
                      |++++++.++. +.++++|++ +++.     .++.+.+     .++|+|+++++....+  ...++.  +  +++ +.++
T Consensus       194 V~v~~r~~~ra~~la~~~g~~-~~~~-----~~l~~~l-----~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~-~~~v  261 (404)
T 1gpj_A          194 VLVANRTYERAVELARDLGGE-AVRF-----DELVDHL-----ARSDVVVSATAAPHPVIHVDDVREALRKRDRR-SPIL  261 (404)
T ss_dssp             EEEECSSHHHHHHHHHHHTCE-ECCG-----GGHHHHH-----HTCSEEEECCSSSSCCBCHHHHHHHHHHCSSC-CCEE
T ss_pred             EEEEeCCHHHHHHHHHHcCCc-eecH-----HhHHHHh-----cCCCEEEEccCCCCceecHHHHHHHHHhccCC-CCEE
Confidence            99999999886 667788876 3332     2333322     1799999999865422  144554  4  445 6677


Q ss_pred             EECc
Q 017457          284 ILGV  287 (371)
Q Consensus       284 ~~g~  287 (371)
                      .++.
T Consensus       262 ~vdi  265 (404)
T 1gpj_A          262 IIDI  265 (404)
T ss_dssp             EEEC
T ss_pred             EEEc
Confidence            7765

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.78  E-value=1.5e-08  Score=94.54  Aligned_cols=139  Identities=19%  Similarity=0.145  Sum_probs=93.9

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcce--EEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD--FINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~--v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      ++++|+|+|+|++|+++++.++.+|+ +|+++++++++.+.+++++.+.  +++...   .++.+.+.     ++|+||+
T Consensus       166 ~~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~-----~~DvVI~  236 (361)
T 1pjc_A          166 KPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNS---AEIETAVA-----EADLLIG  236 (361)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCH---HHHHHHHH-----TCSEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCceeEeeeCCH---HHHHHHHc-----CCCEEEE
Confidence            34899999999999999999999999 9999999999999998877554  343332   23333222     6999999


Q ss_pred             CCCChHH------HHHHHHHhhcCCceEEEECccCCCC-----ceecCHHHHhc-CceEEEeecc-CCC--------chh
Q 017457          261 CIGLTSV------MNDAFNSSREGWGKTVILGVEMHGS-----PISLNSIEILK-GRSVCGTYFG-GLK--------PRS  319 (371)
Q Consensus       261 ~~g~~~~------~~~~~~~l~~~~G~~v~~g~~~~~~-----~~~~~~~~~~~-~~~~~g~~~~-~~~--------~~~  319 (371)
                      |++.+..      .+..++.++++ |.+++++...++.     ..+++...+.. ++++.+...- ...        ...
T Consensus       237 ~~~~~~~~~~~li~~~~~~~~~~g-~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~~lp~~~~~~~s~~~~~~  315 (361)
T 1pjc_A          237 AVLVPGRRAPILVPASLVEQMRTG-SVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTATQALNNS  315 (361)
T ss_dssp             CCCCTTSSCCCCBCHHHHTTSCTT-CEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCSCGGGGCHHHHHHHHHHH
T ss_pred             CCCcCCCCCCeecCHHHHhhCCCC-CEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeCCcchhhHHHHHHHHHHH
Confidence            9986442      46678889997 9999998744321     12233222323 5666664211 100        022


Q ss_pred             hHHHHHHHHHcC
Q 017457          320 DIATLAQKYLDK  331 (371)
Q Consensus       320 ~~~~~~~~~~~g  331 (371)
                      .+..+++++.+|
T Consensus       316 ~~~~l~~l~~~G  327 (361)
T 1pjc_A          316 TLPYVVKLANQG  327 (361)
T ss_dssp             HHHHHHHHHHHG
T ss_pred             HHHHHHHHHhCC
Confidence            346677777776

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.62  E-value=5e-08  Score=91.83  Aligned_cols=167  Identities=17%  Similarity=0.232  Sum_probs=104.2

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceE-EcCCCC-------------C---CccHHH
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATC-------------G---DKTVSQ  245 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v-~~~~~~-------------~---~~~~~~  245 (371)
                      ++++|+|+|+|.+|++++++|+.+|+ +|++.++++++.+.++++|++.+ ++..+.             +   .....+
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~  249 (384)
T 1l7d_A          171 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  249 (384)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence            68999999999999999999999999 89999999999999988998754 222110             0   000122


Q ss_pred             HHHHhhCCCcCEEEECC---CCh--HH-HHHHHHHhhcCCceEEEECccCCCC-ceecCHHHHhc-CceEEEeeccCCCc
Q 017457          246 VIKEMTDGGADYCFECI---GLT--SV-MNDAFNSSREGWGKTVILGVEMHGS-PISLNSIEILK-GRSVCGTYFGGLKP  317 (371)
Q Consensus       246 ~i~~~~~gg~d~vid~~---g~~--~~-~~~~~~~l~~~~G~~v~~g~~~~~~-~~~~~~~~~~~-~~~~~g~~~~~~~~  317 (371)
                      .+.+... ++|+||+++   |.+  .. ....++.|+++ +.+++++...++. ....+...+.. ++++.++..  +. 
T Consensus       250 ~l~~~~~-~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g-~vivdva~~~gg~~~~~~~~~~~~~~~v~i~g~~~--~p-  324 (384)
T 1l7d_A          250 AVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPG-SVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTN--VP-  324 (384)
T ss_dssp             HHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTT-CEEEETTGGGTCSSTTCCTTCEEEETTEEEECCSS--GG-
T ss_pred             HHHHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCC-CEEEEEecCCCCCeecccCCcEEEECCEEEEEeCC--Cc-
Confidence            2444443 799999999   421  21 36788899997 9999998643221 11112222222 677777642  21 


Q ss_pred             hhhHHHHHHHHHcCCCCCCC-ceeE---EEecccHHHHHHHH
Q 017457          318 RSDIATLAQKYLDKELNLGE-FITH---EVSFHDINKAFDLL  355 (371)
Q Consensus       318 ~~~~~~~~~~~~~g~~~~~~-~~~~---~~~~~~~~~a~~~~  355 (371)
                      ......+.+++.++.+.+-. +..+   .+.++.-++.++..
T Consensus       325 ~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  366 (384)
T 1l7d_A          325 SRVAADASPLFAKNLLNFLTPHVDKDTKTLVMKLEDETVSGT  366 (384)
T ss_dssp             GGGHHHHHHHHHHHHHHHHGGGEETTTTEECCCTTCHHHHHH
T ss_pred             chhHHHHHHHHHHhHHHHHHHHHhCCcchhhccccCHHHhcC
Confidence            22345577777776544322 2222   44555455555554

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.52  E-value=2.4e-07  Score=86.85  Aligned_cols=98  Identities=17%  Similarity=0.179  Sum_probs=75.0

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      -++++|+|+|+|.+|+++++.++.+|+ +|+++++++++.+.+++ +|+....+...  ..++.+.+    . ++|+|++
T Consensus       166 l~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~g~~~~~~~~~--~~~l~~~l----~-~aDvVi~  237 (377)
T 2vhw_A          166 VEPADVVVIGAGTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEFCGRIHTRYSS--AYELEGAV----K-RADLVIG  237 (377)
T ss_dssp             BCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSSEEEECC--HHHHHHHH----H-HCSEEEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhcCCeeEeccCC--HHHHHHHH----c-CCCEEEE
Confidence            358999999999999999999999999 99999999999888876 67653222211  02232222    2 6899999


Q ss_pred             CCCChHH------HHHHHHHhhcCCceEEEECcc
Q 017457          261 CIGLTSV------MNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       261 ~~g~~~~------~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      |++.+..      ....++.++++ |.++.++..
T Consensus       238 ~~~~p~~~t~~li~~~~l~~mk~g-~~iV~va~~  270 (377)
T 2vhw_A          238 AVLVPGAKAPKLVSNSLVAHMKPG-AVLVDIAID  270 (377)
T ss_dssp             CCCCTTSCCCCCBCHHHHTTSCTT-CEEEEGGGG
T ss_pred             CCCcCCCCCcceecHHHHhcCCCC-cEEEEEecC
Confidence            9876542      46788899997 999999853

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.51  E-value=2.6e-07  Score=86.43  Aligned_cols=98  Identities=22%  Similarity=0.287  Sum_probs=71.3

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      ++++|+|+|+|.+|+++++.++.+|+ +|+++++++++.+.+++ +|.....+..+  ..++.+.+    . ++|+++++
T Consensus       165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~~g~~~~~~~~~--~~~l~~~~----~-~~DvVi~~  236 (369)
T 2eez_A          165 APASVVILGGGTVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDVFGGRVITLTAT--EANIKKSV----Q-HADLLIGA  236 (369)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSEEEEECC--HHHHHHHH----H-HCSEEEEC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCceEEEecCC--HHHHHHHH----h-CCCEEEEC
Confidence            46899999999999999999999999 99999999999888766 67653232222  02222222    2 68999999


Q ss_pred             CCChHH------HHHHHHHhhcCCceEEEECccC
Q 017457          262 IGLTSV------MNDAFNSSREGWGKTVILGVEM  289 (371)
Q Consensus       262 ~g~~~~------~~~~~~~l~~~~G~~v~~g~~~  289 (371)
                      ++.+..      .+..++.++++ |.++.++...
T Consensus       237 ~g~~~~~~~~li~~~~l~~mk~g-g~iV~v~~~~  269 (369)
T 2eez_A          237 VLVPGAKAPKLVTRDMLSLMKEG-AVIVDVAVDQ  269 (369)
T ss_dssp             CC-------CCSCHHHHTTSCTT-CEEEECC---
T ss_pred             CCCCccccchhHHHHHHHhhcCC-CEEEEEecCC
Confidence            986531      46788889997 9999998743

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.38  E-value=1.2e-06  Score=84.35  Aligned_cols=116  Identities=18%  Similarity=0.223  Sum_probs=87.2

Q ss_pred             chhhhHHHHHHHcC--CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHH
Q 017457          167 GVSTGVGAAWKVAG--VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVS  244 (371)
Q Consensus       167 ~~~ta~~~l~~~~~--~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~  244 (371)
                      ...++++++ .+..  ..+|++|+|+|.|.+|..+++.++.+|+ +|+++++++.+.+.++++|++ ++        ++.
T Consensus       256 ~~~s~~~g~-~r~~~~~l~GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~~~~~~~~A~~~Ga~-~~--------~l~  324 (494)
T 3ce6_A          256 TRHSLIDGI-NRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEIDPINALQAMMEGFD-VV--------TVE  324 (494)
T ss_dssp             HHHHHHHHH-HHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-EC--------CHH
T ss_pred             hhhhhhHHH-HhccCCCCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCE-Ee--------cHH
Confidence            334455543 3333  7889999999999999999999999999 999999999998888889985 32        222


Q ss_pred             HHHHHhhCCCcCEEEECCCChHHHH-HHHHHhhcCCceEEEECccCCCCceecCHHHHhc
Q 017457          245 QVIKEMTDGGADYCFECIGLTSVMN-DAFNSSREGWGKTVILGVEMHGSPISLNSIEILK  303 (371)
Q Consensus       245 ~~i~~~~~gg~d~vid~~g~~~~~~-~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~  303 (371)
                      +.+     .++|+|+++++....+. ..++.++++ |+++.+|...    ..++...+..
T Consensus       325 e~l-----~~aDvVi~atgt~~~i~~~~l~~mk~g-gilvnvG~~~----~eId~~aL~~  374 (494)
T 3ce6_A          325 EAI-----GDADIVVTATGNKDIIMLEHIKAMKDH-AILGNIGHFD----NEIDMAGLER  374 (494)
T ss_dssp             HHG-----GGCSEEEECSSSSCSBCHHHHHHSCTT-CEEEECSSSG----GGBCHHHHHH
T ss_pred             HHH-----hCCCEEEECCCCHHHHHHHHHHhcCCC-cEEEEeCCCC----CccCHHHHHH
Confidence            211     26899999999776555 788999998 9999998632    1344445444

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.37  E-value=1.1e-06  Score=82.90  Aligned_cols=125  Identities=18%  Similarity=0.156  Sum_probs=83.5

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEE-cCCCC----------CCccH----HHHH
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI-NPATC----------GDKTV----SQVI  247 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~-~~~~~----------~~~~~----~~~i  247 (371)
                      ++++|+|+|+|.+|++++++|+.+|+ +|+++++++++.+.++++|++.+. +..+.          ...++    .+.+
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l  249 (401)
T 1x13_A          171 PPAKVMVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF  249 (401)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence            58999999999999999999999999 999999999999999889987542 21100          00111    1123


Q ss_pred             HHhhCCCcCEEEECCCCh-----HH-HHHHHHHhhcCCceEEEECccCCCCceecC--HH-HH-hcCceEEEee
Q 017457          248 KEMTDGGADYCFECIGLT-----SV-MNDAFNSSREGWGKTVILGVEMHGSPISLN--SI-EI-LKGRSVCGTY  311 (371)
Q Consensus       248 ~~~~~gg~d~vid~~g~~-----~~-~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~--~~-~~-~~~~~~~g~~  311 (371)
                      .+... ++|+||++++.+     .. ....++.|+++ +.+++++...++ .....  .. .+ ..++++.|..
T Consensus       250 ~e~~~-~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g-~vIVdva~~~Gg-~v~~~~~~~p~~~~~gv~i~g~~  320 (401)
T 1x13_A          250 AAQAK-EVDIIVTTALIPGKPAPKLITREMVDSMKAG-SVIVDLAAQNGG-NCEYTVPGEIFTTENGVKVIGYT  320 (401)
T ss_dssp             HHHHH-HCSEEEECCCCTTSCCCCCBCHHHHHTSCTT-CEEEETTGGGTC-SBTTCCTTSEEECTTSCEEECCS
T ss_pred             HHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCC-cEEEEEcCCCCC-CcCcccCCCceEEECCEEEEeeC
Confidence            33333 699999995321     21 36788999997 999999964222 12221  11 02 2378888764

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=98.13  E-value=1.1e-05  Score=74.72  Aligned_cols=106  Identities=21%  Similarity=0.198  Sum_probs=76.0

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEE-cCC----CCCCc--------cHHHHHHH
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI-NPA----TCGDK--------TVSQVIKE  249 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~-~~~----~~~~~--------~~~~~i~~  249 (371)
                      ++.+|+|+|+|.+|+.+++.++.+|+ +|++.++++++++.++++|++.+- +.+    ..+..        ...+.+.+
T Consensus       183 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e  261 (381)
T 3p2y_A          183 KPASALVLGVGVAGLQALATAKRLGA-KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED  261 (381)
T ss_dssp             CCCEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred             CCCEEEEECchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence            67899999999999999999999999 999999999999999999986431 100    00000        01112222


Q ss_pred             hhCCCcCEEEECCCCh------HHHHHHHHHhhcCCceEEEECccCCC
Q 017457          250 MTDGGADYCFECIGLT------SVMNDAFNSSREGWGKTVILGVEMHG  291 (371)
Q Consensus       250 ~~~gg~d~vid~~g~~------~~~~~~~~~l~~~~G~~v~~g~~~~~  291 (371)
                      .. .++|+||.++..+      ...+..++.++++ +.+++++...++
T Consensus       262 ~l-~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpG-sVIVDvA~d~GG  307 (381)
T 3p2y_A          262 AI-TKFDIVITTALVPGRPAPRLVTAAAATGMQPG-SVVVDLAGETGG  307 (381)
T ss_dssp             HH-TTCSEEEECCCCTTSCCCCCBCHHHHHTSCTT-CEEEETTGGGTC
T ss_pred             HH-hcCCEEEECCCCCCcccceeecHHHHhcCCCC-cEEEEEeCCCCC
Confidence            22 2799999986321      1247899999997 999999875443

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=98.10  E-value=9.6e-06  Score=75.78  Aligned_cols=104  Identities=19%  Similarity=0.209  Sum_probs=74.7

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcC-C--C------CCC----ccH----HH
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP-A--T------CGD----KTV----SQ  245 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~-~--~------~~~----~~~----~~  245 (371)
                      ++.+|+|+|+|.+|+.++++++.+|+ +|++.++++++++.++++|++.+... .  +      .+.    ..+    .+
T Consensus       189 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~  267 (405)
T 4dio_A          189 PAAKIFVMGAGVAGLQAIATARRLGA-VVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA  267 (405)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence            57899999999999999999999999 99999999999999999987632110 0  0      000    001    11


Q ss_pred             HHHHhhCCCcCEEEECCCCh------HHHHHHHHHhhcCCceEEEECccC
Q 017457          246 VIKEMTDGGADYCFECIGLT------SVMNDAFNSSREGWGKTVILGVEM  289 (371)
Q Consensus       246 ~i~~~~~gg~d~vid~~g~~------~~~~~~~~~l~~~~G~~v~~g~~~  289 (371)
                      .+.+... ++|+||.++..+      ...+..++.|+++ +.+++++...
T Consensus       268 ~l~e~l~-~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~G-sVIVDvA~d~  315 (405)
T 4dio_A          268 LVAEHIA-KQDIVITTALIPGRPAPRLVTREMLDSMKPG-SVVVDLAVER  315 (405)
T ss_dssp             HHHHHHH-TCSEEEECCCCSSSCCCCCBCHHHHTTSCTT-CEEEETTGGG
T ss_pred             HHHHHhc-CCCEEEECCcCCCCCCCEEecHHHHhcCCCC-CEEEEEeCCC
Confidence            2222222 799999985322      1247889999997 9999998643

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.01  E-value=8.8e-05  Score=56.61  Aligned_cols=94  Identities=12%  Similarity=0.132  Sum_probs=65.7

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHHhCcceEE-cCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKKFGITDFI-NPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~lga~~v~-~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      .+++|+|+|+|.+|...++.+...| . +|+++++++++.+.+...+...+. |..+      .+.+.+... ++|+||+
T Consensus         4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~------~~~~~~~~~-~~d~vi~   75 (118)
T 3ic5_A            4 MRWNICVVGAGKIGQMIAALLKTSSNY-SVTVADHDLAALAVLNRMGVATKQVDAKD------EAGLAKALG-GFDAVIS   75 (118)
T ss_dssp             TCEEEEEECCSHHHHHHHHHHHHCSSE-EEEEEESCHHHHHHHHTTTCEEEECCTTC------HHHHHHHTT-TCSEEEE
T ss_pred             CcCeEEEECCCHHHHHHHHHHHhCCCc-eEEEEeCCHHHHHHHHhCCCcEEEecCCC------HHHHHHHHc-CCCEEEE
Confidence            3568999999999999999999999 6 899999999998888766655432 2222      233444433 7999999


Q ss_pred             CCCChHHHHHHHHHhhcCCceEEEE
Q 017457          261 CIGLTSVMNDAFNSSREGWGKTVIL  285 (371)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~~G~~v~~  285 (371)
                      +++.....+....+...+ -.++.+
T Consensus        76 ~~~~~~~~~~~~~~~~~g-~~~~~~   99 (118)
T 3ic5_A           76 AAPFFLTPIIAKAAKAAG-AHYFDL   99 (118)
T ss_dssp             CSCGGGHHHHHHHHHHTT-CEEECC
T ss_pred             CCCchhhHHHHHHHHHhC-CCEEEe
Confidence            998766333344444443 455544

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=97.99  E-value=3.2e-05  Score=69.11  Aligned_cols=101  Identities=16%  Similarity=0.217  Sum_probs=72.0

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHHh----Cc-c--eEEcCCCCCCccHHHH
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKKF----GI-T--DFINPATCGDKTVSQV  246 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~l----ga-~--~v~~~~~~~~~~~~~~  246 (371)
                      +.....+.++++||-+|+|. |..++.+++..+ ..+|++++.+++..+.+++.    |. +  .++..      ++.+.
T Consensus       104 i~~~~~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~------d~~~~  176 (277)
T 1o54_A          104 IAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVR------DISEG  176 (277)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECC------CGGGC
T ss_pred             HHHHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEEC------CHHHc
Confidence            44556789999999999987 888889998864 23999999999888877653    43 2  22221      22111


Q ss_pred             HHHhhCCCcCEEEECCCCh-HHHHHHHHHhhcCCceEEEEC
Q 017457          247 IKEMTDGGADYCFECIGLT-SVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       247 i~~~~~gg~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g  286 (371)
                         +..+.+|+|+...+.+ ..+..+.+.|+++ |.++...
T Consensus       177 ---~~~~~~D~V~~~~~~~~~~l~~~~~~L~pg-G~l~~~~  213 (277)
T 1o54_A          177 ---FDEKDVDALFLDVPDPWNYIDKCWEALKGG-GRFATVC  213 (277)
T ss_dssp             ---CSCCSEEEEEECCSCGGGTHHHHHHHEEEE-EEEEEEE
T ss_pred             ---ccCCccCEEEECCcCHHHHHHHHHHHcCCC-CEEEEEe
Confidence               2223799999766654 5588999999998 9988775

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.95  E-value=3.8e-05  Score=62.24  Aligned_cols=93  Identities=20%  Similarity=0.158  Sum_probs=65.3

Q ss_pred             cCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhCcceEEcCCCCCCccHHHHHHHhhCCCcCE
Q 017457          179 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTDGGADY  257 (371)
Q Consensus       179 ~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~  257 (371)
                      ....++++|+|+|+|.+|...++.++..|. +|+++++++++.+.++ +.|...+. .+.   .+ .+.+.+....++|+
T Consensus        14 ~~~~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~g~~~~~-~d~---~~-~~~l~~~~~~~ad~   87 (155)
T 2g1u_A           14 SKKQKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNSEFSGFTVV-GDA---AE-FETLKECGMEKADM   87 (155)
T ss_dssp             ---CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCTTCCSEEEE-SCT---TS-HHHHHTTTGGGCSE
T ss_pred             hcccCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHhcCCCcEEE-ecC---CC-HHHHHHcCcccCCE
Confidence            345678899999999999999999999999 9999999998888776 66765433 222   12 22333321127999


Q ss_pred             EEECCCChHHHHHHHHHhhc
Q 017457          258 CFECIGLTSVMNDAFNSSRE  277 (371)
Q Consensus       258 vid~~g~~~~~~~~~~~l~~  277 (371)
                      ||.+++.......+...++.
T Consensus        88 Vi~~~~~~~~~~~~~~~~~~  107 (155)
T 2g1u_A           88 VFAFTNDDSTNFFISMNARY  107 (155)
T ss_dssp             EEECSSCHHHHHHHHHHHHH
T ss_pred             EEEEeCCcHHHHHHHHHHHH
Confidence            99999987745555555554

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.91  E-value=1.1e-05  Score=64.59  Aligned_cols=105  Identities=15%  Similarity=0.118  Sum_probs=72.9

Q ss_pred             hhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHH-HHHhCcceEEcCCCCCCccHHHH
Q 017457          168 VSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEI-GKKFGITDFINPATCGDKTVSQV  246 (371)
Q Consensus       168 ~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~-~~~lga~~v~~~~~~~~~~~~~~  246 (371)
                      .++++.++ +......+++|+|+|+|.+|.+.++.++..|+ +|++.++++++.+. +++++.+.. ..     .++.+.
T Consensus         6 ~sv~~~a~-~~~~~~~~~~v~iiG~G~iG~~~a~~l~~~g~-~v~v~~r~~~~~~~~a~~~~~~~~-~~-----~~~~~~   77 (144)
T 3oj0_A            6 VSIPSIVY-DIVRKNGGNKILLVGNGMLASEIAPYFSYPQY-KVTVAGRNIDHVRAFAEKYEYEYV-LI-----NDIDSL   77 (144)
T ss_dssp             CSHHHHHH-HHHHHHCCCEEEEECCSHHHHHHGGGCCTTTC-EEEEEESCHHHHHHHHHHHTCEEE-EC-----SCHHHH
T ss_pred             ccHHHHHH-HHHHhccCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCHHHHHHHHHHhCCceE-ee-----cCHHHH
Confidence            44555543 33333458999999999999999998888999 69999999988765 556775422 22     233333


Q ss_pred             HHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECc
Q 017457          247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       247 i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      +.     ++|+|+++++...... ....++++ +.++.++.
T Consensus        78 ~~-----~~Divi~at~~~~~~~-~~~~l~~g-~~vid~~~  111 (144)
T 3oj0_A           78 IK-----NNDVIITATSSKTPIV-EERSLMPG-KLFIDLGN  111 (144)
T ss_dssp             HH-----TCSEEEECSCCSSCSB-CGGGCCTT-CEEEECCS
T ss_pred             hc-----CCCEEEEeCCCCCcEe-eHHHcCCC-CEEEEccC
Confidence            32     6899999999764221 22567776 88888876

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=97.89  E-value=4.1e-05  Score=68.62  Aligned_cols=98  Identities=13%  Similarity=0.158  Sum_probs=73.1

Q ss_pred             HcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh----Ccce--EEcCCCCCCccHHHHHHHhh
Q 017457          178 VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GITD--FINPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       178 ~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l----ga~~--v~~~~~~~~~~~~~~i~~~~  251 (371)
                      .++++++++||.+|+|+.+..++.+|+..|+ +|++++.+++..+.+++.    |.+.  ++..+.   .+       +.
T Consensus       117 la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga-~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa---~~-------l~  185 (298)
T 3fpf_A          117 LGRFRRGERAVFIGGGPLPLTGILLSHVYGM-RVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDE---TV-------ID  185 (298)
T ss_dssp             HTTCCTTCEEEEECCCSSCHHHHHHHHTTCC-EEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCG---GG-------GG
T ss_pred             HcCCCCcCEEEEECCCccHHHHHHHHHccCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEECch---hh-------CC
Confidence            4678999999999998877888888888899 999999999988887653    4322  222211   11       22


Q ss_pred             CCCcCEEEECCCCh---HHHHHHHHHhhcCCceEEEECc
Q 017457          252 DGGADYCFECIGLT---SVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       252 ~gg~d~vid~~g~~---~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      .+.||+|+.....+   ..++.+.+.|+++ |+++....
T Consensus       186 d~~FDvV~~~a~~~d~~~~l~el~r~LkPG-G~Lvv~~~  223 (298)
T 3fpf_A          186 GLEFDVLMVAALAEPKRRVFRNIHRYVDTE-TRIIYRTY  223 (298)
T ss_dssp             GCCCSEEEECTTCSCHHHHHHHHHHHCCTT-CEEEEEEC
T ss_pred             CCCcCEEEECCCccCHHHHHHHHHHHcCCC-cEEEEEcC
Confidence            34899999654432   4588999999998 99987754

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.82  E-value=7.6e-05  Score=67.29  Aligned_cols=94  Identities=19%  Similarity=0.223  Sum_probs=72.7

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      --+|++|+|+|.|.+|.++++.++..|+ +|++.+++.++.+.+.++|+.. ++.     .++.    ++. ..+|+|+.
T Consensus       152 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~-~~~-----~~l~----~~l-~~aDvVi~  219 (293)
T 3d4o_A          152 TIHGANVAVLGLGRVGMSVARKFAALGA-KVKVGARESDLLARIAEMGMEP-FHI-----SKAA----QEL-RDVDVCIN  219 (293)
T ss_dssp             CSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTSEE-EEG-----GGHH----HHT-TTCSEEEE
T ss_pred             CCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHCCCee-cCh-----hhHH----HHh-cCCCEEEE
Confidence            3478999999999999999999999999 9999999988877777788653 221     1222    222 26899999


Q ss_pred             CCCChHHHHHHHHHhhcCCceEEEECc
Q 017457          261 CIGLTSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      +++....-...+..++++ +.++.++.
T Consensus       220 ~~p~~~i~~~~l~~mk~~-~~lin~ar  245 (293)
T 3d4o_A          220 TIPALVVTANVLAEMPSH-TFVIDLAS  245 (293)
T ss_dssp             CCSSCCBCHHHHHHSCTT-CEEEECSS
T ss_pred             CCChHHhCHHHHHhcCCC-CEEEEecC
Confidence            988644235677889997 99999985

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=97.80  E-value=3.3e-05  Score=68.53  Aligned_cols=94  Identities=14%  Similarity=0.154  Sum_probs=68.9

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHHhCcc-eEEcCCCCCCccHHHHHHHhhCCCcCEEE
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKFGIT-DFINPATCGDKTVSQVIKEMTDGGADYCF  259 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~lga~-~v~~~~~~~~~~~~~~i~~~~~gg~d~vi  259 (371)
                      .++.+||.+|+|. |..+..+++.. |. +|++++.+++..+.+++.+.. .++..+-   .++     ....+.+|+|+
T Consensus        84 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d~---~~~-----~~~~~~fD~v~  153 (269)
T 1p91_A           84 DKATAVLDIGCGE-GYYTHAFADALPEI-TTFGLDVSKVAIKAAAKRYPQVTFCVASS---HRL-----PFSDTSMDAII  153 (269)
T ss_dssp             TTCCEEEEETCTT-STTHHHHHHTCTTS-EEEEEESCHHHHHHHHHHCTTSEEEECCT---TSC-----SBCTTCEEEEE
T ss_pred             CCCCEEEEECCCC-CHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHhCCCcEEEEcch---hhC-----CCCCCceeEEE
Confidence            6788999999988 88999999886 67 999999999999998876543 2322221   111     12223799999


Q ss_pred             ECCCChHHHHHHHHHhhcCCceEEEECc
Q 017457          260 ECIGLTSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       260 d~~g~~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      .... ...+..+.+.|+++ |+++....
T Consensus       154 ~~~~-~~~l~~~~~~L~pg-G~l~~~~~  179 (269)
T 1p91_A          154 RIYA-PCKAEELARVVKPG-GWVITATP  179 (269)
T ss_dssp             EESC-CCCHHHHHHHEEEE-EEEEEEEE
T ss_pred             EeCC-hhhHHHHHHhcCCC-cEEEEEEc
Confidence            6444 34489999999998 99887753

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=97.75  E-value=7.7e-05  Score=69.92  Aligned_cols=91  Identities=15%  Similarity=0.266  Sum_probs=72.5

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      .-.|++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|.. +.        ++.+    +.. ..|+++.
T Consensus       217 ~L~GktV~ViG~G~IGk~vA~~Lra~Ga-~Viv~D~dp~ra~~A~~~G~~-v~--------~Lee----al~-~ADIVi~  281 (435)
T 3gvp_A          217 MFGGKQVVVCGYGEVGKGCCAALKAMGS-IVYVTEIDPICALQACMDGFR-LV--------KLNE----VIR-QVDIVIT  281 (435)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-EC--------CHHH----HTT-TCSEEEE
T ss_pred             eecCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCChhhhHHHHHcCCE-ec--------cHHH----HHh-cCCEEEE
Confidence            5689999999999999999999999999 999999998877666666753 21        2222    222 6899999


Q ss_pred             CCCChHHHH-HHHHHhhcCCceEEEECc
Q 017457          261 CIGLTSVMN-DAFNSSREGWGKTVILGV  287 (371)
Q Consensus       261 ~~g~~~~~~-~~~~~l~~~~G~~v~~g~  287 (371)
                      |.+....+. ..++.|+++ +.++.+|.
T Consensus       282 atgt~~lI~~e~l~~MK~g-ailINvgr  308 (435)
T 3gvp_A          282 CTGNKNVVTREHLDRMKNS-CIVCNMGH  308 (435)
T ss_dssp             CSSCSCSBCHHHHHHSCTT-EEEEECSS
T ss_pred             CCCCcccCCHHHHHhcCCC-cEEEEecC
Confidence            988665454 888999997 99999986

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.72  E-value=0.00048  Score=57.20  Aligned_cols=95  Identities=14%  Similarity=0.212  Sum_probs=67.2

Q ss_pred             CCeEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHHhCcceEE-cCCCCCCccHHHHHHHhhCC-CcCEEEE
Q 017457          184 GSTVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKFGITDFI-NPATCGDKTVSQVIKEMTDG-GADYCFE  260 (371)
Q Consensus       184 g~~VLI~G~g~~G~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~lga~~v~-~~~~~~~~~~~~~i~~~~~g-g~d~vid  260 (371)
                      +++|+|+|.|.+|...++.++.. |. +|+++++++++.+.+++.|...+. |..+      .+.+.+.++- ++|+|+.
T Consensus        39 ~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~~g~~~~~gd~~~------~~~l~~~~~~~~ad~vi~  111 (183)
T 3c85_A           39 HAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRSEGRNVISGDATD------PDFWERILDTGHVKLVLL  111 (183)
T ss_dssp             TCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHHTTCCEEECCTTC------HHHHHTBCSCCCCCEEEE
T ss_pred             CCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHHCCCCEEEcCCCC------HHHHHhccCCCCCCEEEE
Confidence            66899999999999999999998 99 899999999999988888876544 2222      2234443222 8999999


Q ss_pred             CCCChHHHHHHHHHhhcC--CceEEEE
Q 017457          261 CIGLTSVMNDAFNSSREG--WGKTVIL  285 (371)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~--~G~~v~~  285 (371)
                      ++++......+...++..  ...++..
T Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~ii~~  138 (183)
T 3c85_A          112 AMPHHQGNQTALEQLQRRNYKGQIAAI  138 (183)
T ss_dssp             CCSSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             eCCChHHHHHHHHHHHHHCCCCEEEEE
Confidence            999766344444444442  0455543

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=97.71  E-value=3e-05  Score=71.38  Aligned_cols=105  Identities=15%  Similarity=0.182  Sum_probs=68.1

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHHh----C-------------cceEEcCC
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKKF----G-------------ITDFINPA  236 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~l----g-------------a~~v~~~~  236 (371)
                      +.....+.++++||-+|+|. |..++.+++..|. .+|++++.+++..+.+++.    |             .-.++..+
T Consensus        97 ~l~~l~~~~g~~VLDiG~G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d  175 (336)
T 2b25_A           97 ILSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD  175 (336)
T ss_dssp             HHHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC
T ss_pred             HHHhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECC
Confidence            34456789999999999977 8888888888763 4999999999887777652    1             11222221


Q ss_pred             CCCCccHHHHHHHhhCCCcCEEEECCCCh-HHHHHHHHHhhcCCceEEEECc
Q 017457          237 TCGDKTVSQVIKEMTDGGADYCFECIGLT-SVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       237 ~~~~~~~~~~i~~~~~gg~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      -   .+..   ..+..+.+|+|+-....+ ..+..+.+.|+++ |+++.+..
T Consensus       176 ~---~~~~---~~~~~~~fD~V~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~  220 (336)
T 2b25_A          176 I---SGAT---EDIKSLTFDAVALDMLNPHVTLPVFYPHLKHG-GVCAVYVV  220 (336)
T ss_dssp             T---TCCC----------EEEEEECSSSTTTTHHHHGGGEEEE-EEEEEEES
T ss_pred             h---HHcc---cccCCCCeeEEEECCCCHHHHHHHHHHhcCCC-cEEEEEeC
Confidence            1   1110   112223699998554443 3478899999998 99987653

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.68  E-value=0.00012  Score=66.15  Aligned_cols=94  Identities=19%  Similarity=0.221  Sum_probs=72.2

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      --+|++|+|+|.|.+|.++++.++..|+ +|++.+++.++.+.+.++|.. +++.     .++    .++. ..+|+|+.
T Consensus       154 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~-~~~~-----~~l----~~~l-~~aDvVi~  221 (300)
T 2rir_A          154 TIHGSQVAVLGLGRTGMTIARTFAALGA-NVKVGARSSAHLARITEMGLV-PFHT-----DEL----KEHV-KDIDICIN  221 (300)
T ss_dssp             CSTTSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCE-EEEG-----GGH----HHHS-TTCSEEEE
T ss_pred             CCCCCEEEEEcccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCe-EEch-----hhH----HHHh-hCCCEEEE
Confidence            3468999999999999999999999999 999999999887777777764 2221     122    2222 27899999


Q ss_pred             CCCChHHHHHHHHHhhcCCceEEEECc
Q 017457          261 CIGLTSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      +++....-...++.++++ +.++.++.
T Consensus       222 ~~p~~~i~~~~~~~mk~g-~~lin~a~  247 (300)
T 2rir_A          222 TIPSMILNQTVLSSMTPK-TLILDLAS  247 (300)
T ss_dssp             CCSSCCBCHHHHTTSCTT-CEEEECSS
T ss_pred             CCChhhhCHHHHHhCCCC-CEEEEEeC
Confidence            998644234567788997 99999986

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=97.62  E-value=0.00056  Score=59.85  Aligned_cols=102  Identities=12%  Similarity=0.040  Sum_probs=67.8

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcce-EE--cCCCCCCccHHHHHHHhhC--CCcCE
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD-FI--NPATCGDKTVSQVIKEMTD--GGADY  257 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~-v~--~~~~~~~~~~~~~i~~~~~--gg~d~  257 (371)
                      +++|||+|+ +++|.+.++.....|+ +|+++++++++.+.+.+.+... .+  |-.+  ..+..+.+.+...  |++|+
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~v~~~~~~~g~iDi   78 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGD-KVCFIDIDEKRSADFAKERPNLFYFHGDVAD--PLTLKKFVEYAMEKLQRIDV   78 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTCTTEEEEECCTTS--HHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCEEEEEecCCC--HHHHHHHHHHHHHHcCCCCE
Confidence            378999997 9999999999999999 9999999998887776544332 22  2222  1222222222222  37999


Q ss_pred             EEECCCChH-------------------------HHHHHHHHhhcCCceEEEECcc
Q 017457          258 CFECIGLTS-------------------------VMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       258 vid~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      ++++.|...                         ..+.+.+.|...+|+++.+++.
T Consensus        79 LVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~  134 (247)
T 3ged_A           79 LVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIAST  134 (247)
T ss_dssp             EEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCG
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeec
Confidence            999887410                         2345555665434999999864

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.61  E-value=0.001  Score=52.69  Aligned_cols=95  Identities=8%  Similarity=0.104  Sum_probs=67.0

Q ss_pred             CCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCC
Q 017457          184 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG  263 (371)
Q Consensus       184 g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g  263 (371)
                      .++|+|+|.|.+|...++.++..|. +|+++++++++.+.+++.|...+.- +.    .-.+.+.+..-.++|+++-+++
T Consensus         7 ~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~~g~~~i~g-d~----~~~~~l~~a~i~~ad~vi~~~~   80 (140)
T 3fwz_A            7 CNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRERGVRAVLG-NA----ANEEIMQLAHLECAKWLILTIP   80 (140)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEES-CT----TSHHHHHHTTGGGCSEEEECCS
T ss_pred             CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHcCCCEEEC-CC----CCHHHHHhcCcccCCEEEEECC
Confidence            4689999999999999999999999 9999999999999998888765442 21    1122333332227999999999


Q ss_pred             ChHHHH---HHHHHhhcCCceEEEE
Q 017457          264 LTSVMN---DAFNSSREGWGKTVIL  285 (371)
Q Consensus       264 ~~~~~~---~~~~~l~~~~G~~v~~  285 (371)
                      ......   ...+.+.+. .+++..
T Consensus        81 ~~~~n~~~~~~a~~~~~~-~~iiar  104 (140)
T 3fwz_A           81 NGYEAGEIVASARAKNPD-IEIIAR  104 (140)
T ss_dssp             CHHHHHHHHHHHHHHCSS-SEEEEE
T ss_pred             ChHHHHHHHHHHHHHCCC-CeEEEE
Confidence            765222   334445554 555544

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=97.58  E-value=0.00024  Score=63.09  Aligned_cols=103  Identities=17%  Similarity=0.220  Sum_probs=71.8

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCcceE-E--cCCCCCCccHHHHHHHhhC--CC
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDF-I--NPATCGDKTVSQVIKEMTD--GG  254 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~~v-~--~~~~~~~~~~~~~i~~~~~--gg  254 (371)
                      -+|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+ +++|.... +  |-.+  ..+..+.+.+...  |+
T Consensus        27 L~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~~G~  103 (273)
T 4fgs_A           27 LNAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEIGGGAVGIQADSAN--LAELDRLYEKVKAEAGR  103 (273)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTCEEEECCTTC--HHHHHHHHHHHHHHHSC
T ss_pred             hCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeEEEEecCCC--HHHHHHHHHHHHHHcCC
Confidence            46899999998 9999999999999999 999999999887764 55664322 2  3222  1222222232222  37


Q ss_pred             cCEEEECCCCh-------------------------HHHHHHHHHhhcCCceEEEECcc
Q 017457          255 ADYCFECIGLT-------------------------SVMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       255 ~d~vid~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      +|+++++.|..                         ...+.+++.|+.+ |++|.++..
T Consensus       104 iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~-G~IInisS~  161 (273)
T 4fgs_A          104 IDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARG-SSVVLTGST  161 (273)
T ss_dssp             EEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE-EEEEEECCG
T ss_pred             CCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhC-CeEEEEeeh
Confidence            99999988751                         1345666778886 999998763

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.57  E-value=0.00026  Score=66.54  Aligned_cols=91  Identities=18%  Similarity=0.213  Sum_probs=71.7

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      .-.|++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|.. ++        ++.+.+    . ..|+++.
T Consensus       244 ~L~GKTVgVIG~G~IGr~vA~~lrafGa-~Viv~d~dp~~a~~A~~~G~~-vv--------~LeElL----~-~ADIVv~  308 (464)
T 3n58_A          244 MMAGKVAVVCGYGDVGKGSAQSLAGAGA-RVKVTEVDPICALQAAMDGFE-VV--------TLDDAA----S-TADIVVT  308 (464)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCE-EC--------CHHHHG----G-GCSEEEE
T ss_pred             cccCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCcchhhHHHhcCce-ec--------cHHHHH----h-hCCEEEE
Confidence            5689999999999999999999999999 999999888776666556653 22        222222    1 5899999


Q ss_pred             CCCChHHH-HHHHHHhhcCCceEEEECc
Q 017457          261 CIGLTSVM-NDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       261 ~~g~~~~~-~~~~~~l~~~~G~~v~~g~  287 (371)
                      +++....+ ...+..|+++ +.++..|.
T Consensus       309 atgt~~lI~~e~l~~MK~G-AILINvGR  335 (464)
T 3n58_A          309 TTGNKDVITIDHMRKMKDM-CIVGNIGH  335 (464)
T ss_dssp             CCSSSSSBCHHHHHHSCTT-EEEEECSS
T ss_pred             CCCCccccCHHHHhcCCCC-eEEEEcCC
Confidence            98876533 6888999997 89988886

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.48  E-value=0.0002  Score=68.35  Aligned_cols=90  Identities=18%  Similarity=0.254  Sum_probs=70.8

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      -.|++++|+|+|++|.+.++.++..|+ +|+++++++.+.+.+...|++ +.+.++            . ...+|+++++
T Consensus       263 L~GKtVvVtGaGgIG~aiA~~Laa~GA-~Viv~D~~~~~a~~Aa~~g~d-v~~lee------------~-~~~aDvVi~a  327 (488)
T 3ond_A          263 IAGKVAVVAGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQATMEGLQ-VLTLED------------V-VSEADIFVTT  327 (488)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-ECCGGG------------T-TTTCSEEEEC
T ss_pred             ccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHhCCc-cCCHHH------------H-HHhcCEEEeC
Confidence            579999999999999999999999999 999999999888777777753 221111            1 1268999999


Q ss_pred             CCChHHH-HHHHHHhhcCCceEEEECc
Q 017457          262 IGLTSVM-NDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       262 ~g~~~~~-~~~~~~l~~~~G~~v~~g~  287 (371)
                      .|....+ ...++.++++ +.++..|.
T Consensus       328 tG~~~vl~~e~l~~mk~g-aiVvNaG~  353 (488)
T 3ond_A          328 TGNKDIIMLDHMKKMKNN-AIVCNIGH  353 (488)
T ss_dssp             SSCSCSBCHHHHTTSCTT-EEEEESSS
T ss_pred             CCChhhhhHHHHHhcCCC-eEEEEcCC
Confidence            9876544 4478889997 88888886

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.45  E-value=0.0014  Score=51.87  Aligned_cols=77  Identities=17%  Similarity=0.187  Sum_probs=58.2

Q ss_pred             CCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCC
Q 017457          184 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG  263 (371)
Q Consensus       184 g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g  263 (371)
                      .++|+|+|+|.+|...++.+...|. +|+++++++++.+.+++.|...+. .+.    .-.+.+.+..-.++|+++.+++
T Consensus         6 ~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~~~~~~~~-gd~----~~~~~l~~~~~~~~d~vi~~~~   79 (141)
T 3llv_A            6 RYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDEGFDAVI-ADP----TDESFYRSLDLEGVSAVLITGS   79 (141)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEE-CCT----TCHHHHHHSCCTTCSEEEECCS
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCCcEEE-CCC----CCHHHHHhCCcccCCEEEEecC
Confidence            4689999999999999999999999 899999999999988887765433 222    1123344432237999999999


Q ss_pred             ChH
Q 017457          264 LTS  266 (371)
Q Consensus       264 ~~~  266 (371)
                      +..
T Consensus        80 ~~~   82 (141)
T 3llv_A           80 DDE   82 (141)
T ss_dssp             CHH
T ss_pred             CHH
Confidence            654

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=97.43  E-value=0.00048  Score=60.38  Aligned_cols=101  Identities=16%  Similarity=0.207  Sum_probs=72.0

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHH----hCcc---eEEcCCCCCCccHHHH
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQV  246 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~----lga~---~v~~~~~~~~~~~~~~  246 (371)
                      +.....+.++++||-+|+|. |..+..+++.++ ..+|++++.+++..+.+++    .|..   .++.      .++.+ 
T Consensus        85 i~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~------~d~~~-  156 (255)
T 3mb5_A           85 IVAYAGISPGDFIVEAGVGS-GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKL------KDIYE-  156 (255)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEEC------SCGGG-
T ss_pred             HHHhhCCCCCCEEEEecCCc-hHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEE------Cchhh-
Confidence            44566789999999999987 888888998853 3399999999988777765    3532   2222      12211 


Q ss_pred             HHHhhCCCcCEEEECCCCh-HHHHHHHHHhhcCCceEEEEC
Q 017457          247 IKEMTDGGADYCFECIGLT-SVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       247 i~~~~~gg~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g  286 (371)
                        .+..+.+|+|+...+.. ..++.+.+.|+++ |+++.+.
T Consensus       157 --~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~  194 (255)
T 3mb5_A          157 --GIEEENVDHVILDLPQPERVVEHAAKALKPG-GFFVAYT  194 (255)
T ss_dssp             --CCCCCSEEEEEECSSCGGGGHHHHHHHEEEE-EEEEEEE
T ss_pred             --ccCCCCcCEEEECCCCHHHHHHHHHHHcCCC-CEEEEEE
Confidence              12223799999766654 3589999999998 9998764

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.39  E-value=0.00076  Score=53.19  Aligned_cols=77  Identities=19%  Similarity=0.313  Sum_probs=55.3

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  262 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~  262 (371)
                      ++++|+|+|+|.+|...++.+...|. +|+++++++++.+.+++.+...+. .+.   .+ .+.+.+..-+++|+++.++
T Consensus         5 ~~~~v~I~G~G~iG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~~~~~~~-~d~---~~-~~~l~~~~~~~~d~vi~~~   78 (144)
T 2hmt_A            5 KNKQFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATHAVI-ANA---TE-ENELLSLGIRNFEYVIVAI   78 (144)
T ss_dssp             -CCSEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHTTTTTCSEEEE-CCT---TC-HHHHHTTTGGGCSEEEECC
T ss_pred             cCCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCEEEE-eCC---CC-HHHHHhcCCCCCCEEEECC
Confidence            35679999999999999999999998 899999988887776666654332 222   12 2334333122799999999


Q ss_pred             CCh
Q 017457          263 GLT  265 (371)
Q Consensus       263 g~~  265 (371)
                      +..
T Consensus        79 ~~~   81 (144)
T 2hmt_A           79 GAN   81 (144)
T ss_dssp             CSC
T ss_pred             CCc
Confidence            974

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=97.36  E-value=0.0013  Score=56.74  Aligned_cols=98  Identities=11%  Similarity=0.089  Sum_probs=66.4

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      .+++|||+|+ |.+|...+..+...|+ +|+++++++++.+.+...++..++..+-   .   +.+.+... ++|+||++
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~Dl---~---~~~~~~~~-~~D~vi~~   91 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVRNEEQGPELRERGASDIVVANL---E---EDFSHAFA-SIDAVVFA   91 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHTTCSEEEECCT---T---SCCGGGGT-TCSEEEEC
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEECChHHHHHHHhCCCceEEEccc---H---HHHHHHHc-CCCEEEEC
Confidence            5789999998 9999999999988999 9999999999888877767622332221   1   22222222 79999999


Q ss_pred             CCChH-------------HHHHHHHHhhcC-CceEEEECcc
Q 017457          262 IGLTS-------------VMNDAFNSSREG-WGKTVILGVE  288 (371)
Q Consensus       262 ~g~~~-------------~~~~~~~~l~~~-~G~~v~~g~~  288 (371)
                      .|...             ....+++.+... .++++.++..
T Consensus        92 ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~  132 (236)
T 3e8x_A           92 AGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSV  132 (236)
T ss_dssp             CCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCT
T ss_pred             CCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecC
Confidence            88421             123344444332 2689988864

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=97.36  E-value=0.0005  Score=59.84  Aligned_cols=103  Identities=14%  Similarity=0.108  Sum_probs=68.6

Q ss_pred             CCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcc-eEEcCCCCCCccHHHHHHHhhCCCcCEE
Q 017457          181 VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-DFINPATCGDKTVSQVIKEMTDGGADYC  258 (371)
Q Consensus       181 ~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~-~v~~~~~~~~~~~~~~i~~~~~gg~d~v  258 (371)
                      +-+|+++||+|+ +++|.+.++.....|+ +|+++++++++.+....-.+. ...|-.+   ++-.+.+.+.. |++|++
T Consensus         8 lf~GK~alVTGas~GIG~aia~~la~~Ga-~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~---~~~v~~~~~~~-g~iDiL   82 (242)
T 4b79_A            8 IYAGQQVLVTGGSSGIGAAIAMQFAELGA-EVVALGLDADGVHAPRHPRIRREELDITD---SQRLQRLFEAL-PRLDVL   82 (242)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTSTTSCCCTTEEEEECCTTC---HHHHHHHHHHC-SCCSEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHhhhhcCCeEEEEecCCC---HHHHHHHHHhc-CCCCEE
Confidence            457999999997 9999999999999999 999999988765543221121 1223222   33333333322 379999


Q ss_pred             EECCCCh-----------------------HHHHHHHHHhhcCCceEEEECcc
Q 017457          259 FECIGLT-----------------------SVMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       259 id~~g~~-----------------------~~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      +|+.|..                       ...+.+++.|+..+|++|.+++.
T Consensus        83 VNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~  135 (242)
T 4b79_A           83 VNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASM  135 (242)
T ss_dssp             EECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCG
T ss_pred             EECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeec
Confidence            9988741                       12355666776534999999864

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=97.35  E-value=0.0017  Score=56.97  Aligned_cols=106  Identities=20%  Similarity=0.222  Sum_probs=68.7

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HHhCcceEEcCCCCCCc-cHHHHHHHhhC--CC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITDFINPATCGDK-TVSQVIKEMTD--GG  254 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~~v~~~~~~~~~-~~~~~i~~~~~--gg  254 (371)
                      +|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+..    ++.|.+...-.-+..++ +..+.+.+...  |+
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   86 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIH   86 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence            6899999987 9999999999999999 999999998876553    33454322211111112 23333333332  37


Q ss_pred             cCEEEECCCChH-------------------------HHHHHHHHhh--cCCceEEEECccC
Q 017457          255 ADYCFECIGLTS-------------------------VMNDAFNSSR--EGWGKTVILGVEM  289 (371)
Q Consensus       255 ~d~vid~~g~~~-------------------------~~~~~~~~l~--~~~G~~v~~g~~~  289 (371)
                      .|+++++.|...                         ..+.+++.|.  ..+|++|.++...
T Consensus        87 iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~  148 (255)
T 4g81_D           87 VDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLT  148 (255)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGG
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehh
Confidence            999999988411                         2455666662  2238999998643

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=97.32  E-value=0.00093  Score=58.71  Aligned_cols=104  Identities=17%  Similarity=0.208  Sum_probs=66.7

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcc-eEEcCCCCCCcc-HHHHHHHhhC--CCc
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT-DFINPATCGDKT-VSQVIKEMTD--GGA  255 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~-~v~~~~~~~~~~-~~~~i~~~~~--gg~  255 (371)
                      -+|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+.+ ++.. ..+..+- .+.+ ..+.+.+...  +++
T Consensus         6 l~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~~g~i   83 (255)
T 4eso_A            6 YQGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEFGPRVHALRSDI-ADLNEIAVLGAAAGQTLGAI   83 (255)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCT-TCHHHHHHHHHHHHHHHSSE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccC-CCHHHHHHHHHHHHHHhCCC
Confidence            36789999998 9999999998888999 99999999888776543 4433 2222111 1122 2222222211  379


Q ss_pred             CEEEECCCCh----------H---------------HHHHHHHHhhcCCceEEEECcc
Q 017457          256 DYCFECIGLT----------S---------------VMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       256 d~vid~~g~~----------~---------------~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      |+++++.|..          .               ..+.+++.++.+ |+++.++..
T Consensus        84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-g~iv~isS~  140 (255)
T 4eso_A           84 DLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREG-GSIVFTSSV  140 (255)
T ss_dssp             EEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE-EEEEEECCG
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC-CEEEEECCh
Confidence            9999988742          0               123334445566 899998764

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=97.28  E-value=0.0019  Score=57.44  Aligned_cols=78  Identities=19%  Similarity=0.291  Sum_probs=51.3

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCc--c-eEE--cCCCCCCccHHHHHHHhhC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGI--T-DFI--NPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga--~-~v~--~~~~~~~~~~~~~i~~~~~  252 (371)
                      +++++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.    ..+.  . .++  |-.+  .+++.+.+.+...
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~  107 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN--EEDILSMFSAIRS  107 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCC--HHHHHHHHHHHHH
Confidence            5789999998 9999999998888999 9999999887765543    2231  1 122  2222  1222222222221


Q ss_pred             --CCcCEEEECCC
Q 017457          253 --GGADYCFECIG  263 (371)
Q Consensus       253 --gg~d~vid~~g  263 (371)
                        +++|++|++.|
T Consensus       108 ~~g~iD~vi~~Ag  120 (279)
T 1xg5_A          108 QHSGVDICINNAG  120 (279)
T ss_dssp             HHCCCSEEEECCC
T ss_pred             hCCCCCEEEECCC
Confidence              37999999887

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=97.23  E-value=0.0018  Score=56.97  Aligned_cols=103  Identities=12%  Similarity=0.099  Sum_probs=66.4

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH---HHhCcc-eE--EcCCCCCCccHHHHHHHhhC--C
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG---KKFGIT-DF--INPATCGDKTVSQVIKEMTD--G  253 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~---~~lga~-~v--~~~~~~~~~~~~~~i~~~~~--g  253 (371)
                      +|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+   .+.+.. ..  .|-.+  ..+..+.+.+...  |
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~v~~~~~~~G   82 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERA-IPVVFARHAPDGAFLDALAQRQPRATYLPVELQD--DAQCRDAVAQTIATFG   82 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTC--HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCcccHHHHHHHHhcCCCEEEEEeecCC--HHHHHHHHHHHHHHhC
Confidence            5899999997 9999999888888999 899999877654433   334432 12  23222  1222222333222  3


Q ss_pred             CcCEEEECCCCh------------------------HHHHHHHHHhhcCCceEEEECcc
Q 017457          254 GADYCFECIGLT------------------------SVMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       254 g~d~vid~~g~~------------------------~~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      ++|+++++.|..                        ...+.+++.|+.++|++|.+++.
T Consensus        83 ~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~  141 (258)
T 4gkb_A           83 RLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSK  141 (258)
T ss_dssp             CCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCT
T ss_pred             CCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeeh
Confidence            799999998741                        02455566675534999999863

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=97.22  E-value=0.002  Score=57.24  Aligned_cols=103  Identities=17%  Similarity=0.190  Sum_probs=71.1

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHHh-----C--cc--eEEcCCCCCCccHH
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKKF-----G--IT--DFINPATCGDKTVS  244 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~l-----g--a~--~v~~~~~~~~~~~~  244 (371)
                      +.....+.++++||-+|+| .|..+..+++..+ ..+|++++.+++..+.+++.     |  .+  .++..      +..
T Consensus        91 i~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~------d~~  163 (280)
T 1i9g_A           91 IVHEGDIFPGARVLEAGAG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVS------DLA  163 (280)
T ss_dssp             HHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECS------CGG
T ss_pred             HHHHcCCCCCCEEEEEccc-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEEC------chH
Confidence            3455678999999999998 5888888998753 23999999999888777653     4  22  22221      111


Q ss_pred             HHHHHhhCCCcCEEEECCCCh-HHHHHHHHHhhcCCceEEEECc
Q 017457          245 QVIKEMTDGGADYCFECIGLT-SVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       245 ~~i~~~~~gg~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      +.  .+..+.+|+|+.....+ ..+..+.+.|+++ |.++.+..
T Consensus       164 ~~--~~~~~~~D~v~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~  204 (280)
T 1i9g_A          164 DS--ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAG-GVLMVYVA  204 (280)
T ss_dssp             GC--CCCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEES
T ss_pred             hc--CCCCCceeEEEECCcCHHHHHHHHHHhCCCC-CEEEEEeC
Confidence            10  11123799998655544 5588999999998 99887753

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=97.22  E-value=0.0026  Score=55.63  Aligned_cols=105  Identities=17%  Similarity=0.174  Sum_probs=65.6

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhCcc-eEEcCCCCCCccHHHHHHHhhC--CCcCE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGIT-DFINPATCGDKTVSQVIKEMTD--GGADY  257 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga~-~v~~~~~~~~~~~~~~i~~~~~--gg~d~  257 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+. +++.. ..+..+-.+.++..+.+.....  +.+|+
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   83 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4789999998 9999999998888999 9999999988766543 34432 2222211011222222222221  36899


Q ss_pred             EEECCCCh----------H---------------HHHHHHHHhhcCCceEEEECcc
Q 017457          258 CFECIGLT----------S---------------VMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       258 vid~~g~~----------~---------------~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      ++++.|..          .               ..+.+++.+....|+++.++..
T Consensus        84 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~g~iv~isS~  139 (253)
T 1hxh_A           84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASV  139 (253)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCG
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcCCEEEEEcch
Confidence            99988731          0               1234455554422899988763

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=97.21  E-value=0.0036  Score=54.19  Aligned_cols=78  Identities=14%  Similarity=0.200  Sum_probs=52.1

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcc-eEE--cCCCCCCccHHHHHHHhhC--CCcC
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT-DFI--NPATCGDKTVSQVIKEMTD--GGAD  256 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~-~v~--~~~~~~~~~~~~~i~~~~~--gg~d  256 (371)
                      ++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+.+ ++.. ..+  |-.+  .++..+.+.+...  +.+|
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~g~id   79 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGH-QVSMMGRRYQRLQQQELLLGNAVIGIVADLAH--HEDVDVAFAAAVEWGGLPE   79 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTS--HHHHHHHHHHHHHHHCSCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCceEEECCCCC--HHHHHHHHHHHHHhcCCCc
Confidence            578999998 9999999988888999 99999999888776543 3322 122  2222  1222222222221  3789


Q ss_pred             EEEECCCC
Q 017457          257 YCFECIGL  264 (371)
Q Consensus       257 ~vid~~g~  264 (371)
                      +++++.|.
T Consensus        80 ~lvnnAg~   87 (235)
T 3l6e_A           80 LVLHCAGT   87 (235)
T ss_dssp             EEEEECCC
T ss_pred             EEEECCCC
Confidence            99998874

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=97.20  E-value=0.003  Score=55.84  Aligned_cols=82  Identities=17%  Similarity=0.201  Sum_probs=54.3

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCcce-EEcCCCCCCccHHHHHHHhhC--CCcC
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITD-FINPATCGDKTVSQVIKEMTD--GGAD  256 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~~-v~~~~~~~~~~~~~~i~~~~~--gg~d  256 (371)
                      -.++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+ ++++... ++..+-.+.++..+.+.+...  +++|
T Consensus        25 l~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  103 (266)
T 3grp_A           25 LTGRKALVTGATGGIGEAIARCFHAQGA-IVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGID  103 (266)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCC
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence            35789999998 9999999999989999 999999998877664 4455432 222111011222222222221  3799


Q ss_pred             EEEECCCC
Q 017457          257 YCFECIGL  264 (371)
Q Consensus       257 ~vid~~g~  264 (371)
                      +++++.|.
T Consensus       104 ~lvnnAg~  111 (266)
T 3grp_A          104 ILVNNAGI  111 (266)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999884

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=97.19  E-value=0.0011  Score=62.26  Aligned_cols=91  Identities=20%  Similarity=0.308  Sum_probs=70.0

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      .-.|++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|...+         ++.+.+    . ..|+++.
T Consensus       208 ~L~GktVgIiG~G~IG~~vA~~Lka~Ga-~Viv~D~~p~~a~~A~~~G~~~~---------sL~eal----~-~ADVVil  272 (436)
T 3h9u_A          208 MIAGKTACVCGYGDVGKGCAAALRGFGA-RVVVTEVDPINALQAAMEGYQVL---------LVEDVV----E-EAHIFVT  272 (436)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC---------CHHHHT----T-TCSEEEE
T ss_pred             cccCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCChhhhHHHHHhCCeec---------CHHHHH----h-hCCEEEE
Confidence            4579999999999999999999999999 99999999887777777775321         222222    2 6899998


Q ss_pred             CCCChHHHH-HHHHHhhcCCceEEEECc
Q 017457          261 CIGLTSVMN-DAFNSSREGWGKTVILGV  287 (371)
Q Consensus       261 ~~g~~~~~~-~~~~~l~~~~G~~v~~g~  287 (371)
                      +.+....+. ..++.|+++ ..++..+.
T Consensus       273 t~gt~~iI~~e~l~~MK~g-AIVINvgR  299 (436)
T 3h9u_A          273 TTGNDDIITSEHFPRMRDD-AIVCNIGH  299 (436)
T ss_dssp             CSSCSCSBCTTTGGGCCTT-EEEEECSS
T ss_pred             CCCCcCccCHHHHhhcCCC-cEEEEeCC
Confidence            887654333 667788997 88888874

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=97.10  E-value=0.0025  Score=56.82  Aligned_cols=79  Identities=11%  Similarity=0.154  Sum_probs=51.1

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-h---Cc-c-eEE--cCCCCCCccHHHHHHHhhC-
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F---GI-T-DFI--NPATCGDKTVSQVIKEMTD-  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l---ga-~-~v~--~~~~~~~~~~~~~i~~~~~-  252 (371)
                      .|+++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ +   +. . ..+  |-.+  .++..+.+.+... 
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~  108 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGY-SVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGD--PDQVAALFAAVRAE  108 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            6789999998 9999999998888999 99999999887665432 2   21 1 222  3222  1222222222221 


Q ss_pred             -CCcCEEEECCCC
Q 017457          253 -GGADYCFECIGL  264 (371)
Q Consensus       253 -gg~d~vid~~g~  264 (371)
                       +++|+++++.|.
T Consensus       109 ~g~iD~lvnnAG~  121 (281)
T 4dry_A          109 FARLDLLVNNAGS  121 (281)
T ss_dssp             HSCCSEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence             379999998874

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=97.10  E-value=0.0034  Score=55.28  Aligned_cols=78  Identities=12%  Similarity=0.215  Sum_probs=50.3

Q ss_pred             CCCeEEEEcC-Ch--HHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCc--ceEE--cCCCCCCccHHHHHHHhh
Q 017457          183 VGSTVAIFGL-GA--VGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI--TDFI--NPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       183 ~g~~VLI~G~-g~--~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga--~~v~--~~~~~~~~~~~~~i~~~~  251 (371)
                      .++++||+|+ |.  +|.+.+..+...|+ +|++++++++..+.+++    .+.  ..++  |-.+  .++..+.+.+..
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~   82 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTN--DAEIETCFASIK   82 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSS--SHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCC--HHHHHHHHHHHH
Confidence            5789999987 66  99998888888899 89999888755444433    232  1222  3222  233333333332


Q ss_pred             C--CCcCEEEECCC
Q 017457          252 D--GGADYCFECIG  263 (371)
Q Consensus       252 ~--gg~d~vid~~g  263 (371)
                      .  +.+|+++++.|
T Consensus        83 ~~~g~id~li~~Ag   96 (266)
T 3oig_A           83 EQVGVIHGIAHCIA   96 (266)
T ss_dssp             HHHSCCCEEEECCC
T ss_pred             HHhCCeeEEEEccc
Confidence            2  27899999876

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=97.10  E-value=0.0023  Score=56.11  Aligned_cols=103  Identities=16%  Similarity=0.217  Sum_probs=67.4

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HHhCcceE---EcCCCCCCccHHHHHHHhhC--
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITDF---INPATCGDKTVSQVIKEMTD--  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~~v---~~~~~~~~~~~~~~i~~~~~--  252 (371)
                      +|+++||+|+ +++|.+.++.....|+ +|+.+++++++.+.+    ++.|.+..   .|-.+  .++..+.+.+...  
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~--~~~v~~~~~~~~~~~   82 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSK--KKDVEEFVRRTFETY   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence            5899999997 9999999888888999 999999999876654    33454322   23222  1222222222222  


Q ss_pred             CCcCEEEECCCCh--------------------------HHHHHHHHHhhc-CCceEEEECcc
Q 017457          253 GGADYCFECIGLT--------------------------SVMNDAFNSSRE-GWGKTVILGVE  288 (371)
Q Consensus       253 gg~d~vid~~g~~--------------------------~~~~~~~~~l~~-~~G~~v~~g~~  288 (371)
                      |+.|+++++.|..                          ...+.+++.|.. ++|++|.+++.
T Consensus        83 G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~  145 (254)
T 4fn4_A           83 SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASI  145 (254)
T ss_dssp             SCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred             CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEech
Confidence            3799999988731                          024555665533 34899999864

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=97.09  E-value=0.0037  Score=56.07  Aligned_cols=105  Identities=17%  Similarity=0.175  Sum_probs=65.2

Q ss_pred             CCCCeEEEEcC-Ch--HHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHHHHHHhh--C
Q 017457          182 EVGSTVAIFGL-GA--VGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMT--D  252 (371)
Q Consensus       182 ~~g~~VLI~G~-g~--~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~~--~  252 (371)
                      -.++++||+|+ |+  +|.+.+..+...|+ +|++++++++..+.+++    .+...++.-+-.+.++..+.+.+..  -
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  107 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKW  107 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence            46899999987 66  99999988888999 89999988654443332    3432232221101122222222222  1


Q ss_pred             CCcCEEEECCCChH-----------------------------HHHHHHHHhhcCCceEEEECcc
Q 017457          253 GGADYCFECIGLTS-----------------------------VMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       253 gg~d~vid~~g~~~-----------------------------~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      +++|+++++.|...                             ..+.+++.+..+ |+++.++..
T Consensus       108 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~Iv~isS~  171 (293)
T 3grk_A          108 GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADG-GSILTLTYY  171 (293)
T ss_dssp             SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTC-EEEEEEECG
T ss_pred             CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CEEEEEeeh
Confidence            37999999887320                             234555566676 999998763

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=97.08  E-value=0.0033  Score=54.86  Aligned_cols=81  Identities=25%  Similarity=0.319  Sum_probs=53.8

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCcceEEcCCCCCCcc-HHHHHHHhhC--CCcCE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDFINPATCGDKT-VSQVIKEMTD--GGADY  257 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~~v~~~~~~~~~~-~~~~i~~~~~--gg~d~  257 (371)
                      +|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+ .+++.....-.-+..+.+ ..+.+.+...  +++|+
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   83 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGA-TVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDI   83 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            5789999998 9999999999999999 999999998877664 345543222111111122 2222222221  37999


Q ss_pred             EEECCCC
Q 017457          258 CFECIGL  264 (371)
Q Consensus       258 vid~~g~  264 (371)
                      ++++.|.
T Consensus        84 lv~nAg~   90 (247)
T 3rwb_A           84 LVNNASI   90 (247)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9998883

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=97.06  E-value=0.0064  Score=53.44  Aligned_cols=79  Identities=23%  Similarity=0.360  Sum_probs=52.0

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eEE--cCCCCCCccHHHHHHHhhC--
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFI--NPATCGDKTVSQVIKEMTD--  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~--~~~~~~~~~~~~~i~~~~~--  252 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+.+    .|.. .++  |-.+  .++..+.+.+...  
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   82 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTS--EEAVIGTVDSVVRDF   82 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHHh
Confidence            5789999998 9999999999988999 89999998877655432    2432 222  3222  1222222222221  


Q ss_pred             CCcCEEEECCCC
Q 017457          253 GGADYCFECIGL  264 (371)
Q Consensus       253 gg~d~vid~~g~  264 (371)
                      +++|+++++.|.
T Consensus        83 g~id~lv~nAg~   94 (262)
T 1zem_A           83 GKIDFLFNNAGY   94 (262)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999998763

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=97.03  E-value=0.0056  Score=53.91  Aligned_cols=102  Identities=23%  Similarity=0.248  Sum_probs=63.8

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-Hh-----Ccc-eEE--cCCCCCCccHHHHHHHhhC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF-----GIT-DFI--NPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~l-----ga~-~v~--~~~~~~~~~~~~~i~~~~~  252 (371)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ++     +.. ..+  |-.+  .++..+.+.....
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~   82 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD--QQQLRDTFRKVVD   82 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTS--HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCC--HHHHHHHHHHHHH
Confidence            5789999998 9999999999888999 9999999887655432 22     211 222  2222  1222222222211


Q ss_pred             --CCcCEEEECCCChH-----------------HHHHHHHHhhc-----CCceEEEECcc
Q 017457          253 --GGADYCFECIGLTS-----------------VMNDAFNSSRE-----GWGKTVILGVE  288 (371)
Q Consensus       253 --gg~d~vid~~g~~~-----------------~~~~~~~~l~~-----~~G~~v~~g~~  288 (371)
                        +.+|+++++.|...                 ..+.+++.+..     . |+++.++..
T Consensus        83 ~~g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~-g~iv~isS~  141 (267)
T 2gdz_A           83 HFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEG-GIIINMSSL  141 (267)
T ss_dssp             HHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCC-EEEEEECCG
T ss_pred             HcCCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCC-CEEEEeCCc
Confidence              37899999987420                 12344555543     4 789988763

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=97.03  E-value=0.0044  Score=55.19  Aligned_cols=104  Identities=19%  Similarity=0.249  Sum_probs=63.5

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH-HHH----HHHhCcc-eEEcCCCCCCccHHHHHHHhhC--C
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-FEI----GKKFGIT-DFINPATCGDKTVSQVIKEMTD--G  253 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~-~~~----~~~lga~-~v~~~~~~~~~~~~~~i~~~~~--g  253 (371)
                      +++++||+|+ |++|.+.+..+...|+ +|++++++.++ .+.    +++.|.+ .++..+-.+.++..+.+.+...  +
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  106 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG  106 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5789999998 9999999999988999 89998877543 222    2334533 2222111011222222222221  3


Q ss_pred             CcCEEEECCCCh----------H---------------HHHHHHHHhhcCCceEEEECcc
Q 017457          254 GADYCFECIGLT----------S---------------VMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       254 g~d~vid~~g~~----------~---------------~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      ++|+++++.|..          .               ..+.+.+.++.. |+++.++..
T Consensus       107 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS~  165 (283)
T 1g0o_A          107 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG-GRLILMGSI  165 (283)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT-CEEEEECCG
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC-CeEEEEech
Confidence            799999988731          0               124445555555 899999863

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=97.02  E-value=0.0061  Score=51.91  Aligned_cols=98  Identities=8%  Similarity=0.054  Sum_probs=63.4

Q ss_pred             CeEEEEcC-ChHHHHHHHHHH-HcCCCeEEEEcCChh-HHHHHHHhCcc-eEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          185 STVAIFGL-GAVGLAVAEGAR-LNRASKIIGVDINPE-KFEIGKKFGIT-DFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la~-~~g~~~Vi~~~~~~~-~~~~~~~lga~-~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      ++|||+|+ |.+|.+.++.+. ..|+ +|++++++++ +.+.+...+.. .++..+-   .+ .+.+.+... ++|++|+
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~---~d-~~~~~~~~~-~~d~vv~   79 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQLKTRIPPEIIDHERVTVIEGSF---QN-PGXLEQAVT-NAEVVFV   79 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSHHHHSCHHHHTSTTEEEEECCT---TC-HHHHHHHHT-TCSEEEE
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCccccchhhccCCCceEEEECCC---CC-HHHHHHHHc-CCCEEEE
Confidence            56999998 999999888887 8999 9999999988 66555322221 2222221   12 223444333 7999999


Q ss_pred             CCCChH-HHHHHHHHhhcC-CceEEEECcc
Q 017457          261 CIGLTS-VMNDAFNSSREG-WGKTVILGVE  288 (371)
Q Consensus       261 ~~g~~~-~~~~~~~~l~~~-~G~~v~~g~~  288 (371)
                      +.|... ..+.+++.+... .++++.++..
T Consensus        80 ~ag~~n~~~~~~~~~~~~~~~~~iv~iSs~  109 (221)
T 3r6d_A           80 GAMESGSDMASIVKALSRXNIRRVIGVSMA  109 (221)
T ss_dssp             SCCCCHHHHHHHHHHHHHTTCCEEEEEEET
T ss_pred             cCCCCChhHHHHHHHHHhcCCCeEEEEeec
Confidence            998632 145555656543 2588888753

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=97.02  E-value=0.0027  Score=55.32  Aligned_cols=83  Identities=20%  Similarity=0.106  Sum_probs=54.2

Q ss_pred             CCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcceEEcCCCCCCccHHHHHHHhhCCCcCE
Q 017457          180 GVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADY  257 (371)
Q Consensus       180 ~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~  257 (371)
                      ...++++|||+|+ |++|.+.+..+...|+ +|++++++.++.+.+.+ +.....+..-+..+.+..+.+.+.. +++|+
T Consensus        10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~id~   87 (249)
T 3f9i_A           10 IDLTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKT-SNLDI   87 (249)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTC-SCCSE
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhc-CCCCE
Confidence            3567899999998 9999999988888999 99999999888776543 4332222111111122222222211 37999


Q ss_pred             EEECCCC
Q 017457          258 CFECIGL  264 (371)
Q Consensus       258 vid~~g~  264 (371)
                      ++++.|.
T Consensus        88 li~~Ag~   94 (249)
T 3f9i_A           88 LVCNAGI   94 (249)
T ss_dssp             EEECCC-
T ss_pred             EEECCCC
Confidence            9998873

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=97.01  E-value=0.0034  Score=55.15  Aligned_cols=78  Identities=22%  Similarity=0.292  Sum_probs=51.8

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-h-----Ccc-eEE--cCCCCCCccHHHHHHHhhC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F-----GIT-DFI--NPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l-----ga~-~v~--~~~~~~~~~~~~~i~~~~~  252 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+.+ +     +.. .++  |-.+  .+++.+.+.+...
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~   82 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGA-RLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIRE--PGDIDRLFEKARD   82 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCC--HHHHHHHHHHHHH
Confidence            4789999998 9999999998888999 99999998877655422 2     211 222  3222  1223333333332


Q ss_pred             C-CcCEEEECCC
Q 017457          253 G-GADYCFECIG  263 (371)
Q Consensus       253 g-g~d~vid~~g  263 (371)
                      . ++|+++++.|
T Consensus        83 ~~gid~lv~~Ag   94 (260)
T 2z1n_A           83 LGGADILVYSTG   94 (260)
T ss_dssp             TTCCSEEEECCC
T ss_pred             hcCCCEEEECCC
Confidence            2 4999999887

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=97.01  E-value=0.0043  Score=56.38  Aligned_cols=78  Identities=17%  Similarity=0.166  Sum_probs=52.5

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCc--c-eEE--cCCCCCCccHHHHHHHhh-
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI--T-DFI--NPATCGDKTVSQVIKEMT-  251 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga--~-~v~--~~~~~~~~~~~~~i~~~~-  251 (371)
                      .+++|||+|+ |++|.+.+..+...|+ +|++++++.++.+.+.+    .+.  . .++  |-.+  ...+.+.+.... 
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~   83 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVAS--REGFKMAADEVEA   83 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCC--HHHHHHHHHHHHH
Confidence            5789999998 9999999988888999 89999999887665432    232  1 222  3222  122333333322 


Q ss_pred             -CCCcCEEEECCC
Q 017457          252 -DGGADYCFECIG  263 (371)
Q Consensus       252 -~gg~d~vid~~g  263 (371)
                       -+++|++|++.|
T Consensus        84 ~~g~id~lv~nAg   96 (319)
T 3ioy_A           84 RFGPVSILCNNAG   96 (319)
T ss_dssp             HTCCEEEEEECCC
T ss_pred             hCCCCCEEEECCC
Confidence             137899999988

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.00  E-value=0.0026  Score=55.79  Aligned_cols=80  Identities=20%  Similarity=0.282  Sum_probs=51.8

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhC--CCcCEEE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD--GGADYCF  259 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~--gg~d~vi  259 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|+++++++++.+..++++. .++..+-.+.++..+.+.+...  +++|+++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv   82 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVLV   82 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4789999998 9999999998888999 99999988777333344432 3332221011223333332221  3799999


Q ss_pred             ECCCC
Q 017457          260 ECIGL  264 (371)
Q Consensus       260 d~~g~  264 (371)
                      ++.|.
T Consensus        83 ~~Ag~   87 (256)
T 2d1y_A           83 NNAAI   87 (256)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            98873

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=96.99  E-value=0.0031  Score=56.43  Aligned_cols=80  Identities=19%  Similarity=0.154  Sum_probs=53.8

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcc-eEEcCCCCCCccHHHHHHHhhCCCcCEE
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT-DFINPATCGDKTVSQVIKEMTDGGADYC  258 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~-~v~~~~~~~~~~~~~~i~~~~~gg~d~v  258 (371)
                      -+|+++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+.+ ++.. .++.-+- .+.+-.+.+.+.. +++|++
T Consensus        14 l~gk~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl-~d~~~v~~~~~~~-~~iD~l   90 (291)
T 3rd5_A           14 FAQRTVVITGANSGLGAVTARELARRGA-TVIMAVRDTRKGEAAARTMAGQVEVRELDL-QDLSSVRRFADGV-SGADVL   90 (291)
T ss_dssp             CTTCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTSSSEEEEEECCT-TCHHHHHHHHHTC-CCEEEE
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCeeEEEcCC-CCHHHHHHHHHhc-CCCCEE
Confidence            35789999998 9999999998888999 99999999988776543 4432 2222111 1122222222222 378999


Q ss_pred             EECCCC
Q 017457          259 FECIGL  264 (371)
Q Consensus       259 id~~g~  264 (371)
                      +++.|.
T Consensus        91 v~nAg~   96 (291)
T 3rd5_A           91 INNAGI   96 (291)
T ss_dssp             EECCCC
T ss_pred             EECCcC
Confidence            998873

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=96.99  E-value=0.0076  Score=52.70  Aligned_cols=77  Identities=16%  Similarity=0.126  Sum_probs=50.5

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcc-eEE--cCCCCCCccHHHHHHHhh--CC
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFI--NPATCGDKTVSQVIKEMT--DG  253 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~-~v~--~~~~~~~~~~~~~i~~~~--~g  253 (371)
                      ++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+.    ..+.. .++  |-.+  .++..+.+.+..  -+
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~g   78 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD--RDQVFAAVEQARKTLG   78 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHHhC
Confidence            578999998 9999999999888999 9999999887665432    22432 222  2222  122222222221  13


Q ss_pred             CcCEEEECCC
Q 017457          254 GADYCFECIG  263 (371)
Q Consensus       254 g~d~vid~~g  263 (371)
                      ++|+++++.|
T Consensus        79 ~id~lv~nAg   88 (256)
T 1geg_A           79 GFDVIVNNAG   88 (256)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999887

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=96.98  E-value=0.0054  Score=53.29  Aligned_cols=81  Identities=17%  Similarity=0.206  Sum_probs=51.5

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhC---cceEEcCCCCCCccHHHHHHHhhC--CCc
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFG---ITDFINPATCGDKTVSQVIKEMTD--GGA  255 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lg---a~~v~~~~~~~~~~~~~~i~~~~~--gg~  255 (371)
                      +++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+. ++.   .-.++..+-.+.+++.+.+.....  +.+
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4789999998 9999999998888999 8999999887765543 232   112222211011222222222211  269


Q ss_pred             CEEEECCCC
Q 017457          256 DYCFECIGL  264 (371)
Q Consensus       256 d~vid~~g~  264 (371)
                      |++|++.|.
T Consensus        84 d~li~~Ag~   92 (251)
T 1zk4_A           84 STLVNNAGI   92 (251)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998873

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=96.98  E-value=0.0084  Score=50.58  Aligned_cols=101  Identities=14%  Similarity=0.159  Sum_probs=70.3

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc---eEEcCCCCCCccHHHHH
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVI  247 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~---~v~~~~~~~~~~~~~~i  247 (371)
                      +.....+.++++||-+|+|. |..++.+|+. +. +|++++.+++..+.+++    .|..   .++..+-   .+.   +
T Consensus        47 ~l~~l~~~~~~~vLDlGcG~-G~~~~~la~~-~~-~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~---~~~---~  117 (204)
T 3njr_A           47 TLAALAPRRGELLWDIGGGS-GSVSVEWCLA-GG-RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTA---PAA---L  117 (204)
T ss_dssp             HHHHHCCCTTCEEEEETCTT-CHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCT---TGG---G
T ss_pred             HHHhcCCCCCCEEEEecCCC-CHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCch---hhh---c
Confidence            34456788999999999976 8888888888 77 99999999998877654    3443   2332222   111   1


Q ss_pred             HHhhCCCcCEEEECCCC-hHHHHHHHHHhhcCCceEEEECc
Q 017457          248 KEMTDGGADYCFECIGL-TSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       248 ~~~~~gg~d~vid~~g~-~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      ..  ...+|+|+...+. ...++.+.+.|+++ |+++....
T Consensus       118 ~~--~~~~D~v~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~  155 (204)
T 3njr_A          118 AD--LPLPEAVFIGGGGSQALYDRLWEWLAPG-TRIVANAV  155 (204)
T ss_dssp             TT--SCCCSEEEECSCCCHHHHHHHHHHSCTT-CEEEEEEC
T ss_pred             cc--CCCCCEEEECCcccHHHHHHHHHhcCCC-cEEEEEec
Confidence            11  1279999965443 22588999999998 99887653

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=96.98  E-value=0.008  Score=52.63  Aligned_cols=41  Identities=15%  Similarity=0.155  Sum_probs=35.7

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG  224 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~  224 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~   47 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGA-TVAACDLDRAAAQET   47 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHH
Confidence            4789999998 9999999988888999 999999988776654

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=96.97  E-value=0.0025  Score=55.76  Aligned_cols=79  Identities=13%  Similarity=0.187  Sum_probs=52.3

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----h--C-c-ceEE--cCCCCCCccHHHHHHHhh
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----F--G-I-TDFI--NPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----l--g-a-~~v~--~~~~~~~~~~~~~i~~~~  251 (371)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+    .  + . ..++  |-.+  .++..+.+.+..
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~   82 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITD--CTKADTEIKDIH   82 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTC--HHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCC--HHHHHHHHHHHH
Confidence            5789999998 9999999888888899 99999999887665433    1  2 1 1222  2222  122222233222


Q ss_pred             C--CCcCEEEECCCC
Q 017457          252 D--GGADYCFECIGL  264 (371)
Q Consensus       252 ~--gg~d~vid~~g~  264 (371)
                      .  +++|+++++.|.
T Consensus        83 ~~~g~iD~lvnnAg~   97 (250)
T 3nyw_A           83 QKYGAVDILVNAAAM   97 (250)
T ss_dssp             HHHCCEEEEEECCCC
T ss_pred             HhcCCCCEEEECCCc
Confidence            2  379999999884

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=96.95  E-value=0.0064  Score=56.37  Aligned_cols=93  Identities=16%  Similarity=0.136  Sum_probs=68.0

Q ss_pred             CeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCC
Q 017457          185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL  264 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~  264 (371)
                      -+|+|+|+|.+|...+..+.. .. .|.+++++.++.+.+++......+|..+      .+.+.++.. ++|+|+++++.
T Consensus        17 mkilvlGaG~vG~~~~~~L~~-~~-~v~~~~~~~~~~~~~~~~~~~~~~d~~d------~~~l~~~~~-~~DvVi~~~p~   87 (365)
T 3abi_A           17 MKVLILGAGNIGRAIAWDLKD-EF-DVYIGDVNNENLEKVKEFATPLKVDASN------FDKLVEVMK-EFELVIGALPG   87 (365)
T ss_dssp             CEEEEECCSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHTTTSEEEECCTTC------HHHHHHHHT-TCSEEEECCCG
T ss_pred             cEEEEECCCHHHHHHHHHHhc-CC-CeEEEEcCHHHHHHHhccCCcEEEecCC------HHHHHHHHh-CCCEEEEecCC
Confidence            379999999999998877643 45 8999999999988887654333344333      234444443 68999999997


Q ss_pred             hHHHHHHHHHhhcCCceEEEECc
Q 017457          265 TSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       265 ~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      ......+-.|+..+ -++++++.
T Consensus        88 ~~~~~v~~~~~~~g-~~yvD~s~  109 (365)
T 3abi_A           88 FLGFKSIKAAIKSK-VDMVDVSF  109 (365)
T ss_dssp             GGHHHHHHHHHHHT-CEEEECCC
T ss_pred             cccchHHHHHHhcC-cceEeeec
Confidence            76567777788886 78888864

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=96.95  E-value=0.0075  Score=53.39  Aligned_cols=104  Identities=21%  Similarity=0.317  Sum_probs=63.7

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHHHH----HHhCcce-EEcCCCCCCccHHHHHHHhhC--
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMTD--  252 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~-~~~~~~~~----~~lga~~-v~~~~~~~~~~~~~~i~~~~~--  252 (371)
                      -.++++||+|+ +++|.+.+..+...|+ +|+++++ +.++.+.+    ++.|... .+..+-.+.++..+.+.+...  
T Consensus        29 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  107 (271)
T 3v2g_A           29 LAGKTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEAL  107 (271)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            35789999998 9999999998888999 8888744 44444433    2334332 222221111222233333222  


Q ss_pred             CCcCEEEECCCCh-------------------------HHHHHHHHHhhcCCceEEEECc
Q 017457          253 GGADYCFECIGLT-------------------------SVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       253 gg~d~vid~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      +++|+++++.|..                         ...+.+.+.++.. |+++.++.
T Consensus       108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-g~iv~isS  166 (271)
T 3v2g_A          108 GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDG-GRIITIGS  166 (271)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT-CEEEEECC
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CEEEEEeC
Confidence            3799999988741                         0234555666676 99999875

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.93  E-value=0.0036  Score=54.45  Aligned_cols=78  Identities=21%  Similarity=0.234  Sum_probs=52.8

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhCcceE-EcCCCCCCccHHHHHHHhhC--CCcCE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDF-INPATCGDKTVSQVIKEMTD--GGADY  257 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga~~v-~~~~~~~~~~~~~~i~~~~~--gg~d~  257 (371)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ++|+..+ .|-.+  .++..+.+.+...  +++|+
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~id~   80 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGAHPVVMDVAD--PASVERGFAEALAHLGRLDG   80 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTCEEEECCTTC--HHHHHHHHHHHHHHHSSCCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCEEEEecCCC--HHHHHHHHHHHHHHcCCCCE
Confidence            4689999998 9999999998888999 9999999988776553 3453322 23222  1222222222221  37999


Q ss_pred             EEECCC
Q 017457          258 CFECIG  263 (371)
Q Consensus       258 vid~~g  263 (371)
                      ++++.|
T Consensus        81 lvn~Ag   86 (245)
T 1uls_A           81 VVHYAG   86 (245)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=96.93  E-value=0.0042  Score=54.34  Aligned_cols=75  Identities=12%  Similarity=-0.047  Sum_probs=50.5

Q ss_pred             CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH---hCcceEEcCCCCCCccHHHHHHHhhC--CCcCEE
Q 017457          185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK---FGITDFINPATCGDKTVSQVIKEMTD--GGADYC  258 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~---lga~~v~~~~~~~~~~~~~~i~~~~~--gg~d~v  258 (371)
                      +++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+   .|.+...- +.   ++..+.+.+...  +++|++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~-d~---~~v~~~~~~~~~~~g~iD~l   76 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKPM-SE---QEPAELIEAVTSAYGQVDVL   76 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEEC-CC---CSHHHHHHHHHHHHSCCCEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCcEEEE-CH---HHHHHHHHHHHHHhCCCCEE
Confidence            47899998 9999999999988999 99999988776655432   34332211 22   334333333322  379999


Q ss_pred             EECCCC
Q 017457          259 FECIGL  264 (371)
Q Consensus       259 id~~g~  264 (371)
                      +++.|.
T Consensus        77 v~nAg~   82 (254)
T 1zmt_A           77 VSNDIF   82 (254)
T ss_dssp             EEECCC
T ss_pred             EECCCc
Confidence            998764

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=96.93  E-value=0.017  Score=44.94  Aligned_cols=77  Identities=17%  Similarity=0.232  Sum_probs=53.9

Q ss_pred             CCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457          184 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  262 (371)
Q Consensus       184 g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~  262 (371)
                      +.+|+|+|+|.+|...++.+...|. +|+++++++++.+.+.+ .+...+. .+.   .+ .+.+.+..-.++|+|+.++
T Consensus         4 ~m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~~~-~d~---~~-~~~l~~~~~~~~d~vi~~~   77 (140)
T 1lss_A            4 GMYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDALVIN-GDC---TK-IKTLEDAGIEDADMYIAVT   77 (140)
T ss_dssp             -CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSEEEE-SCT---TS-HHHHHHTTTTTCSEEEECC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHhcCcEEEE-cCC---CC-HHHHHHcCcccCCEEEEee
Confidence            3579999999999999998888898 89999999888877664 4654332 111   11 1223322123799999999


Q ss_pred             CChH
Q 017457          263 GLTS  266 (371)
Q Consensus       263 g~~~  266 (371)
                      +...
T Consensus        78 ~~~~   81 (140)
T 1lss_A           78 GKEE   81 (140)
T ss_dssp             SCHH
T ss_pred             CCch
Confidence            8765

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=96.91  E-value=0.0032  Score=53.01  Aligned_cols=103  Identities=14%  Similarity=0.171  Sum_probs=70.8

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc--eEEcCCCCCCccHHHHHH
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIK  248 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~--~v~~~~~~~~~~~~~~i~  248 (371)
                      +.....++++++||-+|+|. |..++.+++.....+|++++.+++..+.+++    .|.+  .++..+-   .+.   +.
T Consensus        32 ~l~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~---~~~---~~  104 (204)
T 3e05_A           32 TLSKLRLQDDLVMWDIGAGS-ASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFA---PEG---LD  104 (204)
T ss_dssp             HHHHTTCCTTCEEEEETCTT-CHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCT---TTT---CT
T ss_pred             HHHHcCCCCCCEEEEECCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCCh---hhh---hh
Confidence            34556788999999999985 8888899988644499999999998887765    3432  2232211   111   10


Q ss_pred             HhhCCCcCEEEECCC---ChHHHHHHHHHhhcCCceEEEECc
Q 017457          249 EMTDGGADYCFECIG---LTSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       249 ~~~~gg~d~vid~~g---~~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      .  .+.+|+|+....   -...++.+.+.|+++ |+++....
T Consensus       105 ~--~~~~D~i~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  143 (204)
T 3e05_A          105 D--LPDPDRVFIGGSGGMLEEIIDAVDRRLKSE-GVIVLNAV  143 (204)
T ss_dssp             T--SCCCSEEEESCCTTCHHHHHHHHHHHCCTT-CEEEEEEC
T ss_pred             c--CCCCCEEEECCCCcCHHHHHHHHHHhcCCC-eEEEEEec
Confidence            0  137999997654   234578889999998 99987643

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.91  E-value=0.005  Score=54.55  Aligned_cols=79  Identities=18%  Similarity=0.193  Sum_probs=51.1

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-Hh------Ccc-eEE--cCCCCCCccHHHHHHHhh
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF------GIT-DFI--NPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~l------ga~-~v~--~~~~~~~~~~~~~i~~~~  251 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+. ++      +.. .++  |-.+  .++..+.+.+..
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~   81 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTT--DAGQDEILSTTL   81 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS--HHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCC--HHHHHHHHHHHH
Confidence            4788999998 9999999988888999 9999999987766543 23      211 122  2222  122222222222


Q ss_pred             C--CCcCEEEECCCC
Q 017457          252 D--GGADYCFECIGL  264 (371)
Q Consensus       252 ~--gg~d~vid~~g~  264 (371)
                      .  +++|+++++.|.
T Consensus        82 ~~~g~id~lv~~Ag~   96 (278)
T 1spx_A           82 GKFGKLDILVNNAGA   96 (278)
T ss_dssp             HHHSCCCEEEECCC-
T ss_pred             HHcCCCCEEEECCCC
Confidence            1  379999998873

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.89  E-value=0.0064  Score=54.59  Aligned_cols=78  Identities=19%  Similarity=0.255  Sum_probs=51.2

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCc---c-eEE--cCCCCCCccHHHHHHHhh
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI---T-DFI--NPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga---~-~v~--~~~~~~~~~~~~~i~~~~  251 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+.+    .+.   . .++  |-.+  .++..+.+.+..
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~  101 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTE--ASGQDDIINTTL  101 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS--HHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCC--HHHHHHHHHHHH
Confidence            5789999998 9999999998888999 99999999877655422    232   1 222  2222  122222222221


Q ss_pred             C--CCcCEEEECCC
Q 017457          252 D--GGADYCFECIG  263 (371)
Q Consensus       252 ~--gg~d~vid~~g  263 (371)
                      .  +++|+++++.|
T Consensus       102 ~~~g~iD~lvnnAG  115 (297)
T 1xhl_A          102 AKFGKIDILVNNAG  115 (297)
T ss_dssp             HHHSCCCEEEECCC
T ss_pred             HhcCCCCEEEECCC
Confidence            1  37999999887

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=96.88  E-value=0.0038  Score=54.65  Aligned_cols=79  Identities=20%  Similarity=0.263  Sum_probs=53.1

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhCcc-eEE--cCCCCCCccHHHHHHHhhC--CCc
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGIT-DFI--NPATCGDKTVSQVIKEMTD--GGA  255 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga~-~v~--~~~~~~~~~~~~~i~~~~~--gg~  255 (371)
                      +++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +++.. ..+  |-.+  .+++.+.+.+...  +++
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i   80 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTI--EEDWQRVVAYAREEFGSV   80 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEecCCC--HHHHHHHHHHHHHHcCCC
Confidence            4789999998 9999999999988999 9999999988766543 34432 122  3222  1223333332222  379


Q ss_pred             CEEEECCCC
Q 017457          256 DYCFECIGL  264 (371)
Q Consensus       256 d~vid~~g~  264 (371)
                      |+++++.|.
T Consensus        81 D~lv~nAg~   89 (254)
T 1hdc_A           81 DGLVNNAGI   89 (254)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998873

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=96.88  E-value=0.0029  Score=55.55  Aligned_cols=78  Identities=17%  Similarity=0.187  Sum_probs=52.7

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-h---Ccc-eEE--cCCCCCCccHHHHHHHhhC--
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F---GIT-DFI--NPATCGDKTVSQVIKEMTD--  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l---ga~-~v~--~~~~~~~~~~~~~i~~~~~--  252 (371)
                      +++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ +   +.. ..+  |-.+  .++..+.+.+...  
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~   81 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRN--TDDIQKMIEQIDEKF   81 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence            5789999998 9999999999888999 89999999887766543 2   322 222  2222  1222222232222  


Q ss_pred             CCcCEEEECCC
Q 017457          253 GGADYCFECIG  263 (371)
Q Consensus       253 gg~d~vid~~g  263 (371)
                      +++|+++++.|
T Consensus        82 g~id~lv~nAg   92 (257)
T 3imf_A           82 GRIDILINNAA   92 (257)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37999999988

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=96.87  E-value=0.0045  Score=54.29  Aligned_cols=80  Identities=19%  Similarity=0.194  Sum_probs=53.3

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhCcc-eEEcCCCCCCccHHHHHHHhhC--CCcCE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGIT-DFINPATCGDKTVSQVIKEMTD--GGADY  257 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga~-~v~~~~~~~~~~~~~~i~~~~~--gg~d~  257 (371)
                      .++++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+. +++.. ..+..+-.+.++..+.+.+...  +++|+
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   86 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGA-KVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDI   86 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            5789999998 9999999998888999 8999999998877654 35533 2222111011222222332222  27999


Q ss_pred             EEECCC
Q 017457          258 CFECIG  263 (371)
Q Consensus       258 vid~~g  263 (371)
                      ++++.|
T Consensus        87 li~~Ag   92 (261)
T 3n74_A           87 LVNNAG   92 (261)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999877

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=96.87  E-value=0.004  Score=54.65  Aligned_cols=80  Identities=21%  Similarity=0.258  Sum_probs=53.8

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCcc-eEE--cCCCCCCccHHHHHHHhh--CCC
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGIT-DFI--NPATCGDKTVSQVIKEMT--DGG  254 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~-~v~--~~~~~~~~~~~~~i~~~~--~gg  254 (371)
                      -.++++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+ .+++.. ..+  |-.+  .++..+.+.+..  -++
T Consensus         6 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~g~   82 (259)
T 4e6p_A            6 LEGKSALITGSARGIGRAFAEAYVREGA-TVAIADIDIERARQAAAEIGPAAYAVQMDVTR--QDSIDAAIAATVEHAGG   82 (259)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTC--HHHHHHHHHHHHHHSSS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCceEEEeeCCC--HHHHHHHHHHHHHHcCC
Confidence            35789999998 9999999998888999 899999998876654 345432 222  2222  122222233222  237


Q ss_pred             cCEEEECCCC
Q 017457          255 ADYCFECIGL  264 (371)
Q Consensus       255 ~d~vid~~g~  264 (371)
                      +|+++++.|.
T Consensus        83 id~lv~~Ag~   92 (259)
T 4e6p_A           83 LDILVNNAAL   92 (259)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999884

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=96.86  E-value=0.0099  Score=51.40  Aligned_cols=77  Identities=10%  Similarity=0.138  Sum_probs=52.6

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcceEEcCCCCCCccHHHHHHHhhC--CCcCEE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTD--GGADYC  258 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~--gg~d~v  258 (371)
                      +++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ +....++..+-   .+. +.+.++..  +++|++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~---~~~-~~~~~~~~~~~~id~v   80 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDL---GDW-EATERALGSVGPVDLL   80 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCT---TCH-HHHHHHHTTCCCCCEE
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCCCEEEEeC---CCH-HHHHHHHHHcCCCCEE
Confidence            5789999998 9999999999988999 89999999887765433 32222332221   222 23333332  268999


Q ss_pred             EECCCC
Q 017457          259 FECIGL  264 (371)
Q Consensus       259 id~~g~  264 (371)
                      |++.|.
T Consensus        81 i~~Ag~   86 (244)
T 3d3w_A           81 VNNAAV   86 (244)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            998873

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.85  E-value=0.0031  Score=55.57  Aligned_cols=81  Identities=14%  Similarity=0.167  Sum_probs=52.2

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhC-cc-eEEcCCCCCCccHHHHHHHhhC--C
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFG-IT-DFINPATCGDKTVSQVIKEMTD--G  253 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lg-a~-~v~~~~~~~~~~~~~~i~~~~~--g  253 (371)
                      .|+++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.    +.+ .. ..+..+-.+..+..+.+.+...  +
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   87 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFG   87 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            5789999997 9999999998888999 9999999988766543    233 11 2222111011222222222221  3


Q ss_pred             CcCEEEECCCC
Q 017457          254 GADYCFECIGL  264 (371)
Q Consensus       254 g~d~vid~~g~  264 (371)
                      ++|+++++.|.
T Consensus        88 ~id~lvnnAg~   98 (262)
T 3pk0_A           88 GIDVVCANAGV   98 (262)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=96.85  E-value=0.0054  Score=54.21  Aligned_cols=102  Identities=16%  Similarity=0.221  Sum_probs=62.2

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhHHHHH----HHhCcce-EE--cCCCCCCccHHHHHHHhhC
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGV-DINPEKFEIG----KKFGITD-FI--NPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~-~~~~~~~~~~----~~lga~~-v~--~~~~~~~~~~~~~i~~~~~  252 (371)
                      ..++++||+|+ +++|.+.+..+...|+ +|+++ .+++++.+.+    +..+... .+  |-.+  .++..+.+.+...
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~  101 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASDGF-TVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSD--PAAVRRLFATAEE  101 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHHTC-EEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHH
Confidence            45899999998 9999999888888899 78776 5555554443    2334322 22  3222  1222222222222


Q ss_pred             --CCcCEEEECCCCh-------------------------HHHHHHHHHhhcCCceEEEECc
Q 017457          253 --GGADYCFECIGLT-------------------------SVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       253 --gg~d~vid~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                        +++|+++++.|..                         ...+.+++.++.+ |+++.++.
T Consensus       102 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-g~iv~isS  162 (267)
T 3u5t_A          102 AFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVG-GRIINMST  162 (267)
T ss_dssp             HHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CeEEEEeC
Confidence              3799999998741                         0234555666676 89999875

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=96.85  E-value=0.0094  Score=50.45  Aligned_cols=91  Identities=13%  Similarity=0.231  Sum_probs=63.2

Q ss_pred             eEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEE-cCCCCCCccHHHHHHHhhCCCcCEEEECCC
Q 017457          186 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI-NPATCGDKTVSQVIKEMTDGGADYCFECIG  263 (371)
Q Consensus       186 ~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~-~~~~~~~~~~~~~i~~~~~gg~d~vid~~g  263 (371)
                      +|||+|+ |.+|...+..+...|. +|+++++++++.+.+. .+...+. |..+   .+. +   .+  +++|+||++.+
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~-~~~~~~~~D~~d---~~~-~---~~--~~~d~vi~~ag   70 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGH-EVTAIVRNAGKITQTH-KDINILQKDIFD---LTL-S---DL--SDQNVVVDAYG   70 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCSHHHHHHC-SSSEEEECCGGG---CCH-H---HH--TTCSEEEECCC
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCC-EEEEEEcCchhhhhcc-CCCeEEeccccC---hhh-h---hh--cCCCEEEECCc
Confidence            6999998 9999999999999998 9999999988776654 3443322 2222   222 1   11  27999999988


Q ss_pred             Ch--------HHHHHHHHHhhcC-CceEEEECc
Q 017457          264 LT--------SVMNDAFNSSREG-WGKTVILGV  287 (371)
Q Consensus       264 ~~--------~~~~~~~~~l~~~-~G~~v~~g~  287 (371)
                      ..        .....+++.+... .++++.++.
T Consensus        71 ~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS  103 (221)
T 3ew7_A           71 ISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGG  103 (221)
T ss_dssp             SSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred             CCccccchHHHHHHHHHHHHHhcCCceEEEEec
Confidence            63        2345667777653 258888875

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=96.85  E-value=0.0061  Score=54.57  Aligned_cols=101  Identities=17%  Similarity=0.230  Sum_probs=62.2

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH-HHHH----HHhCcce-EE--cCCCCCCccHHHHHHHhhC-
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-FEIG----KKFGITD-FI--NPATCGDKTVSQVIKEMTD-  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~-~~~~----~~lga~~-v~--~~~~~~~~~~~~~i~~~~~-  252 (371)
                      +|+++||+|+ |++|.+.++.+...|+ +|++++++.++ .+.+    ++.|... ++  |-.+  .++..+.+.+... 
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~  122 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSD--EQHCKDIVQETVRQ  122 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTS--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHHHH
Confidence            5789999998 9999999998888999 89998877653 2222    2334332 22  2222  1222222222222 


Q ss_pred             -CCcCEEEECCCCh--------------------------HHHHHHHHHhhcCCceEEEECc
Q 017457          253 -GGADYCFECIGLT--------------------------SVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       253 -gg~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                       +.+|+++++.|..                          ...+.+++.++.+ |+++.++.
T Consensus       123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-g~iv~isS  183 (291)
T 3ijr_A          123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQG-DVIINTAS  183 (291)
T ss_dssp             HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTT-CEEEEECC
T ss_pred             cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhC-CEEEEEec
Confidence             3799999987631                          0133444455566 89998875

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=96.85  E-value=0.0058  Score=52.03  Aligned_cols=92  Identities=16%  Similarity=0.230  Sum_probs=63.8

Q ss_pred             eEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEE-cCCCCCCccHHHHHHHhhCCCcCEEEECCC
Q 017457          186 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI-NPATCGDKTVSQVIKEMTDGGADYCFECIG  263 (371)
Q Consensus       186 ~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~-~~~~~~~~~~~~~i~~~~~gg~d~vid~~g  263 (371)
                      +|||+|+ |.+|...+..+...|. +|+++++++++.+.+...+...+. |..+   .+. +   . . +++|+||++.+
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~D~~d---~~~-~---~-~-~~~d~vi~~ag   71 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGH-EVLAVVRDPQKAADRLGATVATLVKEPLV---LTE-A---D-L-DSVDAVVDALS   71 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHTCTTSEEEECCGGG---CCH-H---H-H-TTCSEEEECCC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCC-EEEEEEecccccccccCCCceEEeccccc---ccH-h---h-c-ccCCEEEECCc
Confidence            5999998 9999999999988999 999999998887765444544332 2222   222 1   1 1 27999999987


Q ss_pred             Ch----------HHHHHHHHHhhcCCceEEEECc
Q 017457          264 LT----------SVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       264 ~~----------~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      ..          .....+++.+...+++++.++.
T Consensus        72 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS  105 (224)
T 3h2s_A           72 VPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILG  105 (224)
T ss_dssp             CCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEECC
T ss_pred             cCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEec
Confidence            62          1245566666654268888864

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=96.85  E-value=0.0042  Score=54.98  Aligned_cols=78  Identities=17%  Similarity=0.235  Sum_probs=52.0

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcceEE--cCCCCCCccHHHHHHHhhC--CCcC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFI--NPATCGDKTVSQVIKEMTD--GGAD  256 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~--~~~~~~~~~~~~~i~~~~~--gg~d  256 (371)
                      +++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+.+ +.....+  |-.+  .++..+.+.+...  +++|
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g~iD   84 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQ--EDDVKTLVSETIRRFGRLD   84 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTS--HHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCeEEEcCCCC--HHHHHHHHHHHHHHcCCCC
Confidence            5789999998 9999999999988999 89999999887765543 3222222  2222  1222222222211  3799


Q ss_pred             EEEECCC
Q 017457          257 YCFECIG  263 (371)
Q Consensus       257 ~vid~~g  263 (371)
                      +++++.|
T Consensus        85 ~lv~nAg   91 (270)
T 1yde_A           85 CVVNNAG   91 (270)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999876

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=96.85  E-value=0.0028  Score=54.90  Aligned_cols=103  Identities=14%  Similarity=0.115  Sum_probs=69.7

Q ss_pred             HcCCCCCCeEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHHHHHHhh
Q 017457          178 VAGVEVGSTVAIFGLGAVGLAVAEGARLN--RASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       178 ~~~~~~g~~VLI~G~g~~G~~ai~la~~~--g~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~~  251 (371)
                      .....++++||-+|+|. |..+..+++..  +. +|++++.+++..+.+++    .|...-+....   .+..+.+..+.
T Consensus        55 l~~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~---~d~~~~~~~~~  129 (239)
T 2hnk_A           55 LTKISGAKRIIEIGTFT-GYSSLCFASALPEDG-KILCCDVSEEWTNVARKYWKENGLENKIFLKL---GSALETLQVLI  129 (239)
T ss_dssp             HHHHHTCSEEEEECCTT-CHHHHHHHHHSCTTC-EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE---SCHHHHHHHHH
T ss_pred             HHHhhCcCEEEEEeCCC-CHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCCEEEEE---CCHHHHHHHHH
Confidence            34456789999999874 88888999987  45 99999999988777765    34321111111   23433333331


Q ss_pred             --------------C-CCcCEEEECCCCh---HHHHHHHHHhhcCCceEEEEC
Q 017457          252 --------------D-GGADYCFECIGLT---SVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       252 --------------~-gg~d~vid~~g~~---~~~~~~~~~l~~~~G~~v~~g  286 (371)
                                    + +.||+|+......   ..++.+.+.|+++ |.++.-.
T Consensus       130 ~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~~  181 (239)
T 2hnk_A          130 DSKSAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPG-GLLIADN  181 (239)
T ss_dssp             HCSSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             hhcccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCC-eEEEEEc
Confidence                          2 5799999765543   3468888999998 9988754

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=96.84  E-value=0.013  Score=51.79  Aligned_cols=80  Identities=21%  Similarity=0.273  Sum_probs=51.0

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCc---ceEEcCCCCCCccHHHHHHHhhC--CCc
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGI---TDFINPATCGDKTVSQVIKEMTD--GGA  255 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga---~~v~~~~~~~~~~~~~~i~~~~~--gg~  255 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|++++++.++.+.+ .+++.   ..++..+-.+..++.+.+.+...  +++
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   93 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL   93 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999998 9999999998888999 999999887765543 33432   12222111011222222222211  379


Q ss_pred             CEEEECCC
Q 017457          256 DYCFECIG  263 (371)
Q Consensus       256 d~vid~~g  263 (371)
                      |++|++.|
T Consensus        94 d~li~~Ag  101 (278)
T 2bgk_A           94 DIMFGNVG  101 (278)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCc
Confidence            99999887

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=96.83  E-value=0.004  Score=55.35  Aligned_cols=79  Identities=20%  Similarity=0.248  Sum_probs=52.4

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eEE--cCCCCCCccHHHHHHHhhC--
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFI--NPATCGDKTVSQVIKEMTD--  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~--~~~~~~~~~~~~~i~~~~~--  252 (371)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+    .+.. ..+  |-.+  .++..+.+.+...  
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~~~  107 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGA-QVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQ--PDQVRGMLDQMTGEL  107 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence            5789999998 9999999988888999 99999998877655432    3322 222  2222  1222222332222  


Q ss_pred             CCcCEEEECCCC
Q 017457          253 GGADYCFECIGL  264 (371)
Q Consensus       253 gg~d~vid~~g~  264 (371)
                      +++|+++++.|.
T Consensus       108 g~iD~lvnnAg~  119 (276)
T 3r1i_A          108 GGIDIAVCNAGI  119 (276)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999998874

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.83  E-value=0.011  Score=52.60  Aligned_cols=97  Identities=14%  Similarity=0.071  Sum_probs=61.4

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCc----ceEEcCCCCCCccHHHHHHHhhCCCcC
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGI----TDFINPATCGDKTVSQVIKEMTDGGAD  256 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga----~~v~~~~~~~~~~~~~~i~~~~~gg~d  256 (371)
                      -.++++||+|+|++|.+++..+...|+++|+++.++.++.+.+ ++++.    ..+.....   .++.+.+.     .+|
T Consensus       125 l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~---~~l~~~l~-----~~D  196 (283)
T 3jyo_A          125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDA---RGIEDVIA-----AAD  196 (283)
T ss_dssp             CCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECS---TTHHHHHH-----HSS
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCH---HHHHHHHh-----cCC
Confidence            4688999999999999999988889997899999999887654 33331    11211111   23433333     589


Q ss_pred             EEEECCCChHH----HHHHHHHhhcCCceEEEECc
Q 017457          257 YCFECIGLTSV----MNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       257 ~vid~~g~~~~----~~~~~~~l~~~~G~~v~~g~  287 (371)
                      +|+++++....    .......++++ ..++++-.
T Consensus       197 iVInaTp~Gm~~~~~~pi~~~~l~~~-~~v~DlvY  230 (283)
T 3jyo_A          197 GVVNATPMGMPAHPGTAFDVSCLTKD-HWVGDVVY  230 (283)
T ss_dssp             EEEECSSTTSTTSCSCSSCGGGCCTT-CEEEECCC
T ss_pred             EEEECCCCCCCCCCCCCCCHHHhCCC-CEEEEecC
Confidence            99999874320    00112345554 55566644

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=96.83  E-value=0.0033  Score=55.36  Aligned_cols=80  Identities=15%  Similarity=0.199  Sum_probs=53.1

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eEE--cCCCCCCccHHHHHHHhhC-
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFI--NPATCGDKTVSQVIKEMTD-  252 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~--~~~~~~~~~~~~~i~~~~~-  252 (371)
                      -+++++||+|+ |++|.+.+..+...|+ +|++++++.++.+.+.+    .+.. .++  |-.+  .++..+.+.+... 
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~  103 (262)
T 3rkr_A           27 LSGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAGGEAESHACDLSH--SDAIAAFATGVLAA  103 (262)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCC--HHHHHHHHHHHHHh
Confidence            45789999998 9999999988888899 89999999887665432    3332 222  2222  1222222222221 


Q ss_pred             -CCcCEEEECCCC
Q 017457          253 -GGADYCFECIGL  264 (371)
Q Consensus       253 -gg~d~vid~~g~  264 (371)
                       +.+|+++++.|.
T Consensus       104 ~g~id~lv~~Ag~  116 (262)
T 3rkr_A          104 HGRCDVLVNNAGV  116 (262)
T ss_dssp             HSCCSEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence             379999998874

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=96.83  E-value=0.0044  Score=55.07  Aligned_cols=79  Identities=19%  Similarity=0.213  Sum_probs=53.5

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhCcce-EE--cCCCCCCccHHHHHHHhhC--CCc
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITD-FI--NPATCGDKTVSQVIKEMTD--GGA  255 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga~~-v~--~~~~~~~~~~~~~i~~~~~--gg~  255 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+. +++... .+  |-.+  .++..+.+.+...  +++
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g~i  102 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGA-YVVVADVNEDAAVRVANEIGSKAFGVRVDVSS--AKDAESMVEKTTAKWGRV  102 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCTTEEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEecCCC--HHHHHHHHHHHHHHcCCC
Confidence            5789999998 9999999998888999 9999999988776653 355332 22  2222  1222222222222  379


Q ss_pred             CEEEECCCC
Q 017457          256 DYCFECIGL  264 (371)
Q Consensus       256 d~vid~~g~  264 (371)
                      |+++++.|.
T Consensus       103 D~lv~nAg~  111 (277)
T 4dqx_A          103 DVLVNNAGF  111 (277)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999883

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=96.83  E-value=0.0043  Score=54.14  Aligned_cols=81  Identities=23%  Similarity=0.252  Sum_probs=52.6

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eEEcCCCCCCccHHHHHHHhhC--CC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--GG  254 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~~~~~~~~~~~~~~i~~~~~--gg  254 (371)
                      +++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+    .+.. .++..+-.+.++..+.+.+...  ++
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   86 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGG   86 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5789999998 9999999999989999 89999999887665433    2322 2222211011222222222211  37


Q ss_pred             cCEEEECCCC
Q 017457          255 ADYCFECIGL  264 (371)
Q Consensus       255 ~d~vid~~g~  264 (371)
                      +|+++++.|.
T Consensus        87 id~li~~Ag~   96 (253)
T 3qiv_A           87 IDYLVNNAAI   96 (253)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999998874

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=96.82  E-value=0.0047  Score=54.44  Aligned_cols=78  Identities=24%  Similarity=0.259  Sum_probs=51.5

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-h-----Ccc-eEE--cCCCCCCccHHHHHHHhhC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F-----GIT-DFI--NPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l-----ga~-~v~--~~~~~~~~~~~~~i~~~~~  252 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+.+ +     +.. ..+  |-.+  .++..+.+.+...
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~   88 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD--EAQVEAYVTATTE   88 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTS--HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCC--HHHHHHHHHHHHH
Confidence            5789999998 9999999988888999 99999998877654422 2     432 222  3222  1222223332221


Q ss_pred             --CCcCEEEECCC
Q 017457          253 --GGADYCFECIG  263 (371)
Q Consensus       253 --gg~d~vid~~g  263 (371)
                        +++|+++++.|
T Consensus        89 ~~g~id~lv~nAg  101 (267)
T 1iy8_A           89 RFGRIDGFFNNAG  101 (267)
T ss_dssp             HHSCCSEEEECCC
T ss_pred             HcCCCCEEEECCC
Confidence              37999999876

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=96.82  E-value=0.0045  Score=50.59  Aligned_cols=103  Identities=20%  Similarity=0.242  Sum_probs=70.1

Q ss_pred             HHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eE-EcCCCCCCccHHHHHHH
Q 017457          176 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DF-INPATCGDKTVSQVIKE  249 (371)
Q Consensus       176 ~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v-~~~~~~~~~~~~~~i~~  249 (371)
                      .....+.++++||-+|+|. |..+..+++..+..+|++++.+++..+.+++    .|.. .+ +..+.   .   +.+..
T Consensus        18 ~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~---~---~~~~~   90 (178)
T 3hm2_A           18 ISALAPKPHETLWDIGGGS-GSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGA---P---RAFDD   90 (178)
T ss_dssp             HHHHCCCTTEEEEEESTTT-THHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCT---T---GGGGG
T ss_pred             HHHhcccCCCeEEEeCCCC-CHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecch---H---hhhhc
Confidence            3455678899999999986 8888899988643399999999988887764    3443 22 22111   1   11111


Q ss_pred             hhCCCcCEEEECCCCh--HHHHHHHHHhhcCCceEEEECc
Q 017457          250 MTDGGADYCFECIGLT--SVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       250 ~~~gg~d~vid~~g~~--~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                       ..+.+|+|+......  ..++.+.+.|+++ |+++....
T Consensus        91 -~~~~~D~i~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  128 (178)
T 3hm2_A           91 -VPDNPDVIFIGGGLTAPGVFAAAWKRLPVG-GRLVANAV  128 (178)
T ss_dssp             -CCSCCSEEEECC-TTCTTHHHHHHHTCCTT-CEEEEEEC
T ss_pred             -cCCCCCEEEECCcccHHHHHHHHHHhcCCC-CEEEEEee
Confidence             114799999654432  3589999999998 99887653

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=96.82  E-value=0.0047  Score=55.10  Aligned_cols=81  Identities=12%  Similarity=0.156  Sum_probs=52.8

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-h---Ccc-eEEcCCCCCCccHHHHHHHhhC--CC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F---GIT-DFINPATCGDKTVSQVIKEMTD--GG  254 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l---ga~-~v~~~~~~~~~~~~~~i~~~~~--gg  254 (371)
                      +++++||+|+ +++|.+.++.+...|+ +|++++++.++.+.+.+ +   +.. ..+..+-.+..+..+.+.+...  ++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGH  105 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5789999998 9999999998888999 99999999887665433 2   322 2222111011222223332222  37


Q ss_pred             cCEEEECCCC
Q 017457          255 ADYCFECIGL  264 (371)
Q Consensus       255 ~d~vid~~g~  264 (371)
                      +|+++++.|.
T Consensus       106 iD~lVnnAg~  115 (283)
T 3v8b_A          106 LDIVVANAGI  115 (283)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999998873

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=96.81  E-value=0.0099  Score=51.94  Aligned_cols=80  Identities=16%  Similarity=0.212  Sum_probs=49.3

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH--HHHHHHhCcce-EEcCCCCCCccHHHHHHHhhC--CCcC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK--FEIGKKFGITD-FINPATCGDKTVSQVIKEMTD--GGAD  256 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~--~~~~~~lga~~-v~~~~~~~~~~~~~~i~~~~~--gg~d  256 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|+++++++++  .+.+.+.+... ++..+-.+.+++.+.+.+...  +++|
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGA-NIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVD   81 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4689999998 9999999998888999 89999887651  22233334322 222111011222222222221  3799


Q ss_pred             EEEECCC
Q 017457          257 YCFECIG  263 (371)
Q Consensus       257 ~vid~~g  263 (371)
                      +++++.|
T Consensus        82 ~lv~~Ag   88 (255)
T 2q2v_A           82 ILVNNAG   88 (255)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999887

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=96.81  E-value=0.0052  Score=53.55  Aligned_cols=78  Identities=21%  Similarity=0.253  Sum_probs=51.7

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eEE--cCCCCCCccHHHHHHHhhC--
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFI--NPATCGDKTVSQVIKEMTD--  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~--~~~~~~~~~~~~~i~~~~~--  252 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+.+    .|.. ..+  |-.+  .++..+.+.+...  
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~   82 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGA-AVAIAARRVEKLRALGDELTAAGAKVHVLELDVAD--RQGVDAAVASTVEAL   82 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence            4789999998 9999999998888999 99999998877665432    2432 222  2222  1222222222221  


Q ss_pred             CCcCEEEECCC
Q 017457          253 GGADYCFECIG  263 (371)
Q Consensus       253 gg~d~vid~~g  263 (371)
                      +++|+++++.|
T Consensus        83 g~id~lv~nAg   93 (247)
T 2jah_A           83 GGLDILVNNAG   93 (247)
T ss_dssp             SCCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37999999887

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=96.81  E-value=0.0084  Score=52.44  Aligned_cols=80  Identities=18%  Similarity=0.165  Sum_probs=50.0

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHHHHH----HhCcc-eEEcCCCCCCccHHHHHHHhhC--C
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--G  253 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~-~~~~~~~~~----~lga~-~v~~~~~~~~~~~~~~i~~~~~--g  253 (371)
                      +++++||+|+ |++|.+.+..+...|+ +|+++++ ++++.+.+.    +.+.. .++..+-.+..+..+.+.+...  +
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG   84 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4789999998 9999999988888899 8999998 766554432    22432 2222111011222222332221  3


Q ss_pred             CcCEEEECCC
Q 017457          254 GADYCFECIG  263 (371)
Q Consensus       254 g~d~vid~~g  263 (371)
                      ++|++|++.|
T Consensus        85 ~id~li~~Ag   94 (261)
T 1gee_A           85 KLDVMINNAG   94 (261)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999877

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=96.81  E-value=0.0015  Score=56.46  Aligned_cols=100  Identities=14%  Similarity=0.169  Sum_probs=68.2

Q ss_pred             HcCCCCCCeEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHHh----Ccc---eEEcCCCCCCccHHHHHHH
Q 017457          178 VAGVEVGSTVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKF----GIT---DFINPATCGDKTVSQVIKE  249 (371)
Q Consensus       178 ~~~~~~g~~VLI~G~g~~G~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~l----ga~---~v~~~~~~~~~~~~~~i~~  249 (371)
                      .....++++||-+|+| .|..+..+++.. +. +|++++.+++..+.+++.    |..   .++..      +..+.+..
T Consensus        49 ~~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~------d~~~~~~~  120 (233)
T 2gpy_A           49 LLKMAAPARILEIGTA-IGYSAIRMAQALPEA-TIVSIERDERRYEEAHKHVKALGLESRIELLFG------DALQLGEK  120 (233)
T ss_dssp             HHHHHCCSEEEEECCT-TSHHHHHHHHHCTTC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS------CGGGSHHH
T ss_pred             HHhccCCCEEEEecCC-CcHHHHHHHHHCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC------CHHHHHHh
Confidence            3445688999999998 588888999887 45 999999999988877653    432   22222      22222222


Q ss_pred             hh-CCCcCEEEECCCC---hHHHHHHHHHhhcCCceEEEEC
Q 017457          250 MT-DGGADYCFECIGL---TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       250 ~~-~gg~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      .. .+.||+|+.....   ...++.+.+.|+++ |.++...
T Consensus       121 ~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~~  160 (233)
T 2gpy_A          121 LELYPLFDVLFIDAAKGQYRRFFDMYSPMVRPG-GLILSDN  160 (233)
T ss_dssp             HTTSCCEEEEEEEGGGSCHHHHHHHHGGGEEEE-EEEEEET
T ss_pred             cccCCCccEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEEc
Confidence            22 2479999854443   34467888899998 9988764

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=96.80  E-value=0.0037  Score=54.54  Aligned_cols=79  Identities=25%  Similarity=0.363  Sum_probs=53.4

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcc-eE--EcCCCCCCccHHHHHHHhhC--CCc
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT-DF--INPATCGDKTVSQVIKEMTD--GGA  255 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~-~v--~~~~~~~~~~~~~~i~~~~~--gg~  255 (371)
                      +|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+.+ ++.. ..  .|-.+  .++..+.+.+...  +++
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g~i   84 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGA-KVIGTATSESGAQAISDYLGDNGKGMALNVTN--PESIEAVLKAITDEFGGV   84 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTC--HHHHHHHHHHHHHHHCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceEEEEeCCC--HHHHHHHHHHHHHHcCCC
Confidence            5789999997 9999999999889999 99999999887766543 3322 12  23222  1222222332222  379


Q ss_pred             CEEEECCCC
Q 017457          256 DYCFECIGL  264 (371)
Q Consensus       256 d~vid~~g~  264 (371)
                      |+++++.|.
T Consensus        85 D~lv~nAg~   93 (248)
T 3op4_A           85 DILVNNAGI   93 (248)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998873

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=96.80  E-value=0.0063  Score=52.67  Aligned_cols=75  Identities=16%  Similarity=0.254  Sum_probs=50.9

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceE-EcCCCCCCccHHHHHHHhhC--CCcCEEE
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMTD--GGADYCF  259 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~--gg~d~vi  259 (371)
                      ++++||+|+ |++|.+.+..+...|+ +|+++++++++  ..+++++..+ .|-.+   .+..+.+.+...  +++|+++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~-~V~~~~r~~~~--~~~~~~~~~~~~D~~~---~~~~~~~~~~~~~~g~id~lv   75 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGY-RVAIASRNPEE--AAQSLGAVPLPTDLEK---DDPKGLVKRALEALGGLHVLV   75 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHH--HHHHHTCEEEECCTTT---SCHHHHHHHHHHHHTSCCEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHH--HHHhhCcEEEecCCch---HHHHHHHHHHHHHcCCCCEEE
Confidence            578999998 9999999999888999 89999988766  3334553322 22221   344333333222  3799999


Q ss_pred             ECCCC
Q 017457          260 ECIGL  264 (371)
Q Consensus       260 d~~g~  264 (371)
                      ++.|.
T Consensus        76 ~~Ag~   80 (239)
T 2ekp_A           76 HAAAV   80 (239)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            98873

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.80  E-value=0.0044  Score=54.63  Aligned_cols=79  Identities=18%  Similarity=0.211  Sum_probs=52.6

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcc-eEE--cCCCCCCccHHHHHHHhhC--CCc
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT-DFI--NPATCGDKTVSQVIKEMTD--GGA  255 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~-~v~--~~~~~~~~~~~~~i~~~~~--gg~  255 (371)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ ++.. ..+  |-.+  .++..+.+.+...  +.+
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~g~i   81 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSD--PKAVEAVFAEALEEFGRL   81 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTS--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCC--HHHHHHHHHHHHHHcCCC
Confidence            4789999998 9999999998888999 99999999887766543 4322 122  3222  1222222222221  378


Q ss_pred             CEEEECCCC
Q 017457          256 DYCFECIGL  264 (371)
Q Consensus       256 d~vid~~g~  264 (371)
                      |+++++.|.
T Consensus        82 D~lvnnAg~   90 (263)
T 2a4k_A           82 HGVAHFAGV   90 (263)
T ss_dssp             CEEEEGGGG
T ss_pred             cEEEECCCC
Confidence            999998873

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=96.79  E-value=0.0049  Score=54.15  Aligned_cols=79  Identities=28%  Similarity=0.422  Sum_probs=51.9

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-h----Ccc-eEE--cCCCCCCccHHHHHHHhhC-
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F----GIT-DFI--NPATCGDKTVSQVIKEMTD-  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l----ga~-~v~--~~~~~~~~~~~~~i~~~~~-  252 (371)
                      +++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+.+ +    +.. .++  |-.+  .++..+.+.+... 
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   82 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGA-HIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVAT--PEGVDAVVESVRSS   82 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTS--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            4789999998 9999999998888999 99999998877654322 2    432 222  3222  1222222222221 


Q ss_pred             -CCcCEEEECCCC
Q 017457          253 -GGADYCFECIGL  264 (371)
Q Consensus       253 -gg~d~vid~~g~  264 (371)
                       +++|+++++.|.
T Consensus        83 ~g~id~lv~~Ag~   95 (263)
T 3ai3_A           83 FGGADILVNNAGT   95 (263)
T ss_dssp             HSSCSEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence             379999998873

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=96.79  E-value=0.0045  Score=54.12  Aligned_cols=82  Identities=17%  Similarity=0.134  Sum_probs=52.8

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hC---cce-EEcCCCCCCccHHHHHHHhh-
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FG---ITD-FINPATCGDKTVSQVIKEMT-  251 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lg---a~~-v~~~~~~~~~~~~~~i~~~~-  251 (371)
                      -.++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+.+    .+   +.. ..|-...+.++..+.+.+.. 
T Consensus        10 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (252)
T 3f1l_A           10 LNDRIILVTGASDGIGREAAMTYARYGA-TVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV   88 (252)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH
Confidence            46889999998 9999999988888999 99999999887665432    11   111 12321111122222233222 


Q ss_pred             -CCCcCEEEECCCC
Q 017457          252 -DGGADYCFECIGL  264 (371)
Q Consensus       252 -~gg~d~vid~~g~  264 (371)
                       .+++|+++++.|.
T Consensus        89 ~~g~id~lv~nAg~  102 (252)
T 3f1l_A           89 NYPRLDGVLHNAGL  102 (252)
T ss_dssp             HCSCCSEEEECCCC
T ss_pred             hCCCCCEEEECCcc
Confidence             2379999998874

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=96.79  E-value=0.0036  Score=55.29  Aligned_cols=79  Identities=20%  Similarity=0.258  Sum_probs=52.5

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcce-E--EcCCCCCCccHHHHHHHhhC--
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITD-F--INPATCGDKTVSQVIKEMTD--  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~-v--~~~~~~~~~~~~~~i~~~~~--  252 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+.+    .+... .  .|-.+  .++..+.+.+...  
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~   79 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGA-KILLGARRQARIEAIATEIRDAGGTALAQVLDVTD--RHSVAAFAQAAVDTW   79 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence            4789999998 9999999998888999 89999999887665432    24321 2  23222  1222222222222  


Q ss_pred             CCcCEEEECCCC
Q 017457          253 GGADYCFECIGL  264 (371)
Q Consensus       253 gg~d~vid~~g~  264 (371)
                      +++|+++++.|.
T Consensus        80 g~iD~lVnnAG~   91 (264)
T 3tfo_A           80 GRIDVLVNNAGV   91 (264)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999998873

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=96.78  E-value=0.003  Score=56.68  Aligned_cols=79  Identities=14%  Similarity=0.192  Sum_probs=51.9

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-h---Cc-c-eEE--cCCCCCCccHHHHHHHhhC-
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F---GI-T-DFI--NPATCGDKTVSQVIKEMTD-  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l---ga-~-~v~--~~~~~~~~~~~~~i~~~~~-  252 (371)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ +   +. . ..+  |-.+  .++..+.+.+... 
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~  116 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSD--PGSCADAARTVVDA  116 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCC--HHHHHHHHHHHHHH
Confidence            5789999998 9999999998889999 99999998877655432 2   31 1 222  2222  1222222222222 


Q ss_pred             -CCcCEEEECCCC
Q 017457          253 -GGADYCFECIGL  264 (371)
Q Consensus       253 -gg~d~vid~~g~  264 (371)
                       +++|+++++.|.
T Consensus       117 ~g~iD~lvnnAg~  129 (293)
T 3rih_A          117 FGALDVVCANAGI  129 (293)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence             379999998873

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=96.78  E-value=0.0074  Score=53.30  Aligned_cols=106  Identities=20%  Similarity=0.217  Sum_probs=65.0

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHHHH----HHhCcce-EEcCCCCCCccHHHHHHHhhC--
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMTD--  252 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~-~~~~~~~~----~~lga~~-v~~~~~~~~~~~~~~i~~~~~--  252 (371)
                      -.|+++||+|+ +++|.+.++.+...|+ +|+++++ +.++.+.+    ++.|.+. .+.-+-.+.++..+.+.+...  
T Consensus        16 l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   94 (270)
T 3is3_A           16 LDGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHF   94 (270)
T ss_dssp             CTTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35789999998 9999999998889999 8888654 44444332    3344332 222111011222223333222  


Q ss_pred             CCcCEEEECCCCh-------------------------HHHHHHHHHhhcCCceEEEECccC
Q 017457          253 GGADYCFECIGLT-------------------------SVMNDAFNSSREGWGKTVILGVEM  289 (371)
Q Consensus       253 gg~d~vid~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~~  289 (371)
                      +.+|+++++.|..                         ...+.+++.+..+ |+++.++...
T Consensus        95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-g~iv~isS~~  155 (270)
T 3is3_A           95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEG-GRIVLTSSNT  155 (270)
T ss_dssp             SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT-CEEEEECCTT
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CeEEEEeCch
Confidence            3799999988741                         0245566677776 9999998643

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=96.78  E-value=0.0066  Score=53.28  Aligned_cols=81  Identities=19%  Similarity=0.167  Sum_probs=49.3

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhHHHHH----HHhCcc-eEEcCCCCCCccHHHHHHHhhC--C
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGV-DINPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--G  253 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~-~~~~~~~~~~----~~lga~-~v~~~~~~~~~~~~~~i~~~~~--g  253 (371)
                      .++++||+|+ +++|.+.+..+...|+ +|+++ .+++++.+.+    ++.+.. ..+.-+-.+.++..+.+.+...  +
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   85 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFG   85 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            5789999998 9999999998888999 88888 5555544432    233432 2222111011222222332222  3


Q ss_pred             CcCEEEECCCC
Q 017457          254 GADYCFECIGL  264 (371)
Q Consensus       254 g~d~vid~~g~  264 (371)
                      ++|+++++.|.
T Consensus        86 ~id~lv~nAg~   96 (259)
T 3edm_A           86 EIHGLVHVAGG   96 (259)
T ss_dssp             SEEEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999998863

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=96.78  E-value=0.0052  Score=54.56  Aligned_cols=79  Identities=14%  Similarity=0.191  Sum_probs=51.0

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-Hh---CcceEEcCCCCCCcc-HHHHHHHhh--CCC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF---GITDFINPATCGDKT-VSQVIKEMT--DGG  254 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~l---ga~~v~~~~~~~~~~-~~~~i~~~~--~gg  254 (371)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ++   +...++..+- .+.+ ..+.+.+..  -++
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~~g~  105 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGA-RVFICARDAEACADTATRLSAYGDCQAIPADL-SSEAGARRLAQALGELSAR  105 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHTTSSCEEECCCCT-TSHHHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEeeC-CCHHHHHHHHHHHHHhcCC
Confidence            4789999998 9999999999888999 9999999987765442 22   2111221111 1122 222222221  237


Q ss_pred             cCEEEECCC
Q 017457          255 ADYCFECIG  263 (371)
Q Consensus       255 ~d~vid~~g  263 (371)
                      +|+++++.|
T Consensus       106 iD~lvnnAg  114 (276)
T 2b4q_A          106 LDILVNNAG  114 (276)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999887

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=96.78  E-value=0.0013  Score=57.01  Aligned_cols=102  Identities=19%  Similarity=0.254  Sum_probs=69.8

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHHHHHHh
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEM  250 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~  250 (371)
                      +.....+.++++||.+|+| .|..+..+++..+. +|++++.+++..+.+++    .|...+ ....   .+..   ..+
T Consensus        83 ~~~~l~~~~~~~vLdiG~G-~G~~~~~la~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v-~~~~---~d~~---~~~  153 (235)
T 1jg1_A           83 MLEIANLKPGMNILEVGTG-SGWNAALISEIVKT-DVYTIERIPELVEFAKRNLERAGVKNV-HVIL---GDGS---KGF  153 (235)
T ss_dssp             HHHHHTCCTTCCEEEECCT-TSHHHHHHHHHHCS-CEEEEESCHHHHHHHHHHHHHTTCCSE-EEEE---SCGG---GCC
T ss_pred             HHHhcCCCCCCEEEEEeCC-cCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHHcCCCCc-EEEE---CCcc---cCC
Confidence            3445578899999999998 58889999998874 99999999988777765    343222 1111   1210   111


Q ss_pred             hCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEEC
Q 017457          251 TDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       251 ~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      ..+ .+|+|+....-......+.+.|+++ |+++..-
T Consensus       154 ~~~~~fD~Ii~~~~~~~~~~~~~~~L~pg-G~lvi~~  189 (235)
T 1jg1_A          154 PPKAPYDVIIVTAGAPKIPEPLIEQLKIG-GKLIIPV  189 (235)
T ss_dssp             GGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEEE
T ss_pred             CCCCCccEEEECCcHHHHHHHHHHhcCCC-cEEEEEE
Confidence            222 5999997766554457888999998 9876653

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.78  E-value=0.012  Score=53.99  Aligned_cols=99  Identities=20%  Similarity=0.196  Sum_probs=63.2

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCC-----CC------Cc-cH-HHHHH
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPAT-----CG------DK-TV-SQVIK  248 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~-----~~------~~-~~-~~~i~  248 (371)
                      -+|++|.|.|.|.+|+.+++.++..|+ +|++.+.++++.+..+++|++.+ +.++     ++      .+ .+ .+.+.
T Consensus       173 L~GktV~I~G~GnVG~~~A~~l~~~Ga-kVvvsD~~~~~~~~a~~~ga~~v-~~~ell~~~~DIliP~A~~~~I~~~~~~  250 (355)
T 1c1d_A          173 LDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHTAV-ALEDVLSTPCDVFAPCAMGGVITTEVAR  250 (355)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC-CGGGGGGCCCSEEEECSCSCCBCHHHHH
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHhcCCEEe-ChHHhhcCccceecHhHHHhhcCHHHHh
Confidence            579999999999999999999999999 99999988777556666776433 1110     00      00 00 11111


Q ss_pred             HhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEEC
Q 017457          249 EMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       249 ~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      .+   +.++++++...+.+.+.+.+.|..+ |.++.-+
T Consensus       251 ~l---k~~iVie~AN~p~t~~eA~~~L~~~-gIlv~Pd  284 (355)
T 1c1d_A          251 TL---DCSVVAGAANNVIADEAASDILHAR-GILYAPD  284 (355)
T ss_dssp             HC---CCSEECCSCTTCBCSHHHHHHHHHT-TCEECCH
T ss_pred             hC---CCCEEEECCCCCCCCHHHHHHHHhC-CEEEECC
Confidence            11   4667777666655333556677765 6555443

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=96.78  E-value=0.0045  Score=55.12  Aligned_cols=79  Identities=15%  Similarity=0.165  Sum_probs=53.6

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcce-EE--cCCCCCCccHHHHHHHhhC--CCc
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITD-FI--NPATCGDKTVSQVIKEMTD--GGA  255 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~-v~--~~~~~~~~~~~~~i~~~~~--gg~  255 (371)
                      .++++||+|+ +++|.+.+..+...|+ +|++++++.++.+.+.+ ++... .+  |-.+  ..+..+.+.+...  +++
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~i   80 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGA-RVAVLDKSAERLRELEVAHGGNAVGVVGDVRS--LQDQKRAAERCLAAFGKI   80 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTBTTEEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHHHHHhcCCC
Confidence            4789999998 9999999998888999 99999999888776543 44322 22  2222  1222222332221  379


Q ss_pred             CEEEECCCC
Q 017457          256 DYCFECIGL  264 (371)
Q Consensus       256 d~vid~~g~  264 (371)
                      |+++++.|.
T Consensus        81 D~lvnnAg~   89 (281)
T 3zv4_A           81 DTLIPNAGI   89 (281)
T ss_dssp             CEEECCCCC
T ss_pred             CEEEECCCc
Confidence            999998873

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=96.77  E-value=0.0038  Score=55.34  Aligned_cols=80  Identities=15%  Similarity=0.139  Sum_probs=52.7

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhCcc-eEE--cCCCCCCccHHHHHHHhhC--CC
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGIT-DFI--NPATCGDKTVSQVIKEMTD--GG  254 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga~-~v~--~~~~~~~~~~~~~i~~~~~--gg  254 (371)
                      ..++++||+|+ |++|.+.+..+...|+ +|++++++.++.+.+. +++.. .++  |-.+  .++..+.+.+...  ++
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g~  102 (272)
T 4dyv_A           26 TGKKIAIVTGAGSGVGRAVAVALAGAGY-GVALAGRRLDALQETAAEIGDDALCVPTDVTD--PDSVRALFTATVEKFGR  102 (272)
T ss_dssp             --CCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTSCCEEEECCTTS--HHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEecCCC--HHHHHHHHHHHHHHcCC
Confidence            45789999998 9999999998888999 9999999988776653 35432 222  2222  1222222222222  37


Q ss_pred             cCEEEECCCC
Q 017457          255 ADYCFECIGL  264 (371)
Q Consensus       255 ~d~vid~~g~  264 (371)
                      +|+++++.|.
T Consensus       103 iD~lVnnAg~  112 (272)
T 4dyv_A          103 VDVLFNNAGT  112 (272)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999998874

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=96.77  E-value=0.0053  Score=53.88  Aligned_cols=78  Identities=17%  Similarity=0.207  Sum_probs=51.8

Q ss_pred             CCCeEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCc-c-eEE--cCCCCCCccHHHHHHHhh
Q 017457          183 VGSTVAIFGL-G--AVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI-T-DFI--NPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       183 ~g~~VLI~G~-g--~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga-~-~v~--~~~~~~~~~~~~~i~~~~  251 (371)
                      +|+++||+|+ |  ++|.+.++.+...|+ +|+++++++++.+.+.+    ++. . ..+  |-.+  .++..+.+.+..
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~   81 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQS--DEEVINGFEQIG   81 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTC--HHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCC--HHHHHHHHHHHH
Confidence            5899999997 5  899999988889999 99999999877665533    332 1 222  3222  122222222222


Q ss_pred             C--CCcCEEEECCC
Q 017457          252 D--GGADYCFECIG  263 (371)
Q Consensus       252 ~--gg~d~vid~~g  263 (371)
                      .  |++|+++++.|
T Consensus        82 ~~~G~iD~lvnnAg   95 (256)
T 4fs3_A           82 KDVGNIDGVYHSIA   95 (256)
T ss_dssp             HHHCCCSEEEECCC
T ss_pred             HHhCCCCEEEeccc
Confidence            2  37999999877

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=96.76  E-value=0.0034  Score=54.86  Aligned_cols=102  Identities=14%  Similarity=0.069  Sum_probs=71.7

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHHh-----Ccce--EEcCCCCCCccHHHH
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKKF-----GITD--FINPATCGDKTVSQV  246 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~l-----ga~~--v~~~~~~~~~~~~~~  246 (371)
                      +.....+.++++||-+|+|. |..+..+++..| ..+|++++.+++..+.+++.     |.+.  +...      ++.+.
T Consensus        88 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~------d~~~~  160 (258)
T 2pwy_A           88 MVTLLDLAPGMRVLEAGTGS-GGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLG------KLEEA  160 (258)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEES------CGGGC
T ss_pred             HHHHcCCCCCCEEEEECCCc-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEEC------chhhc
Confidence            34556789999999999986 888889998853 23999999999988877653     5322  2221      11110


Q ss_pred             HHHhhCCCcCEEEECCCCh-HHHHHHHHHhhcCCceEEEEC
Q 017457          247 IKEMTDGGADYCFECIGLT-SVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       247 i~~~~~gg~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g  286 (371)
                        .+..+.+|+|+...+.. ..+..+.+.|+++ |+++.+.
T Consensus       161 --~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~  198 (258)
T 2pwy_A          161 --ELEEAAYDGVALDLMEPWKVLEKAALALKPD-RFLVAYL  198 (258)
T ss_dssp             --CCCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEE
T ss_pred             --CCCCCCcCEEEECCcCHHHHHHHHHHhCCCC-CEEEEEe
Confidence              11223799999655554 5589999999998 9988775

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=96.76  E-value=0.0052  Score=54.70  Aligned_cols=80  Identities=20%  Similarity=0.243  Sum_probs=52.0

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-h---CcceEEcCCCCCCccHHH-HHHHhhC--CC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F---GITDFINPATCGDKTVSQ-VIKEMTD--GG  254 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l---ga~~v~~~~~~~~~~~~~-~i~~~~~--gg  254 (371)
                      .|+++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ +   +....+-.-+..+.+..+ .+.+...  ++
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   85 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGA-KVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGG   85 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999998 9999999998888999 89999999887665533 2   322211111111122222 2222221  37


Q ss_pred             cCEEEECCC
Q 017457          255 ADYCFECIG  263 (371)
Q Consensus       255 ~d~vid~~g  263 (371)
                      +|+++++.|
T Consensus        86 iD~lvnnAg   94 (280)
T 3tox_A           86 LDTAFNNAG   94 (280)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999887

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=96.76  E-value=0.0047  Score=53.66  Aligned_cols=82  Identities=13%  Similarity=0.151  Sum_probs=52.9

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCc--ceEE--cCCCCCCccHHHHHHHhhC
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI--TDFI--NPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga--~~v~--~~~~~~~~~~~~~i~~~~~  252 (371)
                      -+++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+.+    .+.  ..++  |-+..+.++..+.+.+...
T Consensus        12 l~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~   90 (247)
T 3i1j_A           12 LKGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEH   90 (247)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHH
Confidence            45789999998 9999999998888999 99999999887665432    331  1222  2211111222222222221


Q ss_pred             --CCcCEEEECCCC
Q 017457          253 --GGADYCFECIGL  264 (371)
Q Consensus       253 --gg~d~vid~~g~  264 (371)
                        +++|+++++.|.
T Consensus        91 ~~g~id~lv~nAg~  104 (247)
T 3i1j_A           91 EFGRLDGLLHNASI  104 (247)
T ss_dssp             HHSCCSEEEECCCC
T ss_pred             hCCCCCEEEECCcc
Confidence              379999998873

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=96.74  E-value=0.01  Score=49.31  Aligned_cols=99  Identities=20%  Similarity=0.192  Sum_probs=64.7

Q ss_pred             CCCCCCeEEEEcCChHHHHHHHHHHHcCC---------CeEEEEcCChhHHHHHHHhCcceEE-cCCCCCCccHHHHHHH
Q 017457          180 GVEVGSTVAIFGLGAVGLAVAEGARLNRA---------SKIIGVDINPEKFEIGKKFGITDFI-NPATCGDKTVSQVIKE  249 (371)
Q Consensus       180 ~~~~g~~VLI~G~g~~G~~ai~la~~~g~---------~~Vi~~~~~~~~~~~~~~lga~~v~-~~~~~~~~~~~~~i~~  249 (371)
                      .++++++||.+|+|. |..+..+++..|.         .+|++++.++...     .....++ ..+- ......+.+.+
T Consensus        19 ~~~~~~~vLDlGcG~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~-----~~~~~~~~~~d~-~~~~~~~~~~~   91 (196)
T 2nyu_A           19 ILRPGLRVLDCGAAP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP-----LEGATFLCPADV-TDPRTSQRILE   91 (196)
T ss_dssp             CCCTTCEEEEETCCS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC-----CTTCEEECSCCT-TSHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCC-CHHHHHHHHHhccccccccCCCceEEEEechhccc-----CCCCeEEEeccC-CCHHHHHHHHH
Confidence            368899999999988 8899999998873         3899999887431     1111233 2211 11223334444


Q ss_pred             hhCC-CcCEEEE-----CCCCh------------HHHHHHHHHhhcCCceEEEEC
Q 017457          250 MTDG-GADYCFE-----CIGLT------------SVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       250 ~~~g-g~d~vid-----~~g~~------------~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      ..++ .+|+|+.     +++..            ..+..+.+.|+++ |+++...
T Consensus        92 ~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~  145 (196)
T 2nyu_A           92 VLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPG-GTFLCKT  145 (196)
T ss_dssp             HSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             hcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCC-CEEEEEe
Confidence            4444 8999994     33321            3467788999998 9988764

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=96.74  E-value=0.012  Score=52.71  Aligned_cols=104  Identities=14%  Similarity=0.166  Sum_probs=62.5

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh--hHHHHH----HHhCcceEEcCCCCCCccHH-HHHHHhhC--
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP--EKFEIG----KKFGITDFINPATCGDKTVS-QVIKEMTD--  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~--~~~~~~----~~lga~~v~~~~~~~~~~~~-~~i~~~~~--  252 (371)
                      +++++||+|+ +++|.+.+..+...|+ +|++++++.  ++.+.+    ++.|....+-.-+..+.+.. +.+.+...  
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  126 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL  126 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            5789999998 9999999998889999 899988763  233332    23443322211111112222 22222221  


Q ss_pred             CCcCEEEECCCCh--------------------------HHHHHHHHHhhcCCceEEEECcc
Q 017457          253 GGADYCFECIGLT--------------------------SVMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       253 gg~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      +++|+++++.|..                          ...+.+++.+..+ |+++.++..
T Consensus       127 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-g~Iv~isS~  187 (294)
T 3r3s_A          127 GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKG-ASIITTSSI  187 (294)
T ss_dssp             TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTT-CEEEEECCG
T ss_pred             CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC-CEEEEECCh
Confidence            3799999988731                          0123344455566 899999863

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=96.74  E-value=0.0056  Score=55.12  Aligned_cols=80  Identities=20%  Similarity=0.285  Sum_probs=53.5

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eEE--cCCCCCCccHHHHHHHhhC-
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFI--NPATCGDKTVSQVIKEMTD-  252 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~--~~~~~~~~~~~~~i~~~~~-  252 (371)
                      -.|+++||+|+ |++|.+.+..+...|+ +|++++++.++.+.+.+    .+.. .++  |-.+  ..+..+.+.+... 
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~  105 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRH--LDEMVRLADEAFRL  105 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHh
Confidence            46889999998 9999999998889999 99999999887665432    2332 222  2222  1222222222221 


Q ss_pred             -CCcCEEEECCCC
Q 017457          253 -GGADYCFECIGL  264 (371)
Q Consensus       253 -gg~d~vid~~g~  264 (371)
                       +++|+++++.|.
T Consensus       106 ~g~id~lvnnAg~  118 (301)
T 3tjr_A          106 LGGVDVVFSNAGI  118 (301)
T ss_dssp             HSSCSEEEECCCC
T ss_pred             CCCCCEEEECCCc
Confidence             379999999883

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.74  E-value=0.0059  Score=53.77  Aligned_cols=81  Identities=20%  Similarity=0.182  Sum_probs=53.6

Q ss_pred             CCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eEE--cCCCCCCccHHHHHHHhh-
Q 017457          181 VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFI--NPATCGDKTVSQVIKEMT-  251 (371)
Q Consensus       181 ~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~--~~~~~~~~~~~~~i~~~~-  251 (371)
                      .-.++++||+|+ +++|.+.+..+...|+ +|++++++.++.+.+.+    .|.. ..+  |-.+  .++..+.+.+.. 
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~   84 (264)
T 3ucx_A            8 LLTDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTGRRALSVGTDITD--DAQVAHLVDETMK   84 (264)
T ss_dssp             TTTTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             CcCCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHH
Confidence            346899999998 9999999988888999 89999999887665432    3432 222  3222  122222223222 


Q ss_pred             -CCCcCEEEECCCC
Q 017457          252 -DGGADYCFECIGL  264 (371)
Q Consensus       252 -~gg~d~vid~~g~  264 (371)
                       -+++|+++++.|.
T Consensus        85 ~~g~id~lv~nAg~   98 (264)
T 3ucx_A           85 AYGRVDVVINNAFR   98 (264)
T ss_dssp             HTSCCSEEEECCCS
T ss_pred             HcCCCcEEEECCCC
Confidence             1379999998864

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=96.74  E-value=0.0087  Score=51.26  Aligned_cols=101  Identities=14%  Similarity=0.126  Sum_probs=66.5

Q ss_pred             CCCCCCeEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCChhHHHHHHH----hCcc--eEEcCCCCCCccHHHHHHHhh
Q 017457          180 GVEVGSTVAIFGLGAVGLAVAEGARLN--RASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       180 ~~~~g~~VLI~G~g~~G~~ai~la~~~--g~~~Vi~~~~~~~~~~~~~~----lga~--~v~~~~~~~~~~~~~~i~~~~  251 (371)
                      +.+++.+||-+|+|. |..++.+|+.+  +. +|++++.+++..+.+++    .|..  .+ ....   .+..+.+..+.
T Consensus        53 ~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~g~~~~~i-~~~~---gda~~~l~~~~  126 (221)
T 3dr5_A           53 NGNGSTGAIAITPAA-GLVGLYILNGLADNT-TLTCIDPESEHQRQAKALFREAGYSPSRV-RFLL---SRPLDVMSRLA  126 (221)
T ss_dssp             CCTTCCEEEEESTTH-HHHHHHHHHHSCTTS-EEEEECSCHHHHHHHHHHHHHTTCCGGGE-EEEC---SCHHHHGGGSC
T ss_pred             CCCCCCCEEEEcCCc-hHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCcCcE-EEEE---cCHHHHHHHhc
Confidence            344455999888876 88888999986  55 99999999988777654    3432  22 1111   33433333332


Q ss_pred             CCCcCEEEECCCC---hHHHHHHHHHhhcCCceEEEECc
Q 017457          252 DGGADYCFECIGL---TSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       252 ~gg~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      .+.||+||-....   ...++.+.+.|+++ |.++.-..
T Consensus       127 ~~~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~dn~  164 (221)
T 3dr5_A          127 NDSYQLVFGQVSPMDLKALVDAAWPLLRRG-GALVLADA  164 (221)
T ss_dssp             TTCEEEEEECCCTTTHHHHHHHHHHHEEEE-EEEEETTT
T ss_pred             CCCcCeEEEcCcHHHHHHHHHHHHHHcCCC-cEEEEeCC
Confidence            3489999843322   22478889999998 98886443

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=96.74  E-value=0.0043  Score=54.39  Aligned_cols=81  Identities=19%  Similarity=0.144  Sum_probs=52.2

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eEEcCCCCCCccHHHHHHHhhC--CC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--GG  254 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~~~~~~~~~~~~~~i~~~~~--gg  254 (371)
                      .++++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.+    .+.. ..+..+-.+.++..+.+.+...  ++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   89 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGK   89 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999998 9999998888888899 89999998877665432    3432 2222111011222222222222  37


Q ss_pred             cCEEEECCCC
Q 017457          255 ADYCFECIGL  264 (371)
Q Consensus       255 ~d~vid~~g~  264 (371)
                      +|+++++.|.
T Consensus        90 id~lv~nAg~   99 (256)
T 3gaf_A           90 ITVLVNNAGG   99 (256)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999998873

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=96.73  E-value=0.0059  Score=54.18  Aligned_cols=78  Identities=13%  Similarity=0.175  Sum_probs=51.4

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcc-eEE--cCCCCCCccHHHHHHHhh--C
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFI--NPATCGDKTVSQVIKEMT--D  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~-~v~--~~~~~~~~~~~~~i~~~~--~  252 (371)
                      +++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+.    +.|.. .++  |-.+  .++..+.+.+..  -
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~   97 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS--VPEIEALVAAVVERY   97 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHHh
Confidence            4789999998 9999999999888999 9999999987765432    22432 222  2222  122222222221  1


Q ss_pred             CCcCEEEECCC
Q 017457          253 GGADYCFECIG  263 (371)
Q Consensus       253 gg~d~vid~~g  263 (371)
                      +++|+++++.|
T Consensus        98 g~iD~lv~~Ag  108 (277)
T 2rhc_B           98 GPVDVLVNNAG  108 (277)
T ss_dssp             CSCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37999999887

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=96.73  E-value=0.0048  Score=54.62  Aligned_cols=79  Identities=16%  Similarity=0.198  Sum_probs=53.0

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCcc-eE--EcCCCCCCccHHHHHHHhhC--CCc
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGIT-DF--INPATCGDKTVSQVIKEMTD--GGA  255 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~-~v--~~~~~~~~~~~~~~i~~~~~--gg~  255 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+ ++++.. ..  .|-.+  .++..+.+.+...  +++
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~i   86 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGA-RVVLADLPETDLAGAAASVGRGAVHHVVDLTN--EVSVRALIDFTIDTFGRL   86 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSCHHHHHHHHCTTCEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCCeEEEECCCCC--HHHHHHHHHHHHHHcCCC
Confidence            5789999998 9999999998889999 999999988876654 345532 12  23222  1222222222221  379


Q ss_pred             CEEEECCCC
Q 017457          256 DYCFECIGL  264 (371)
Q Consensus       256 d~vid~~g~  264 (371)
                      |+++++.|.
T Consensus        87 d~lv~nAg~   95 (271)
T 3tzq_B           87 DIVDNNAAH   95 (271)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998773

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=96.72  E-value=0.0066  Score=53.31  Aligned_cols=78  Identities=17%  Similarity=0.206  Sum_probs=51.9

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hC--cceE-EcCCCCCCccHHHHHHHhhC--CCc
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FG--ITDF-INPATCGDKTVSQVIKEMTD--GGA  255 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lg--a~~v-~~~~~~~~~~~~~~i~~~~~--gg~  255 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+.+ +.  +..+ .|-.+  .+++.+.+.+...  +++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d--~~~v~~~~~~~~~~~g~i   87 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGA-TVAIADLDVMAAQAVVAGLENGGFAVEVDVTK--RASVDAAMQKAIDALGGF   87 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCTTCCEEEECCTTC--HHHHHHHHHHHHHHHTCC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCC--HHHHHHHHHHHHHHcCCC
Confidence            4789999998 9999999998888999 99999999887665533 32  2211 23222  1222222222211  379


Q ss_pred             CEEEECCC
Q 017457          256 DYCFECIG  263 (371)
Q Consensus       256 d~vid~~g  263 (371)
                      |+++++.|
T Consensus        88 D~lv~~Ag   95 (263)
T 3ak4_A           88 DLLCANAG   95 (263)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999887

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=96.72  E-value=0.0055  Score=52.63  Aligned_cols=75  Identities=13%  Similarity=0.100  Sum_probs=50.2

Q ss_pred             CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcc-eE--EcCCCCCCccHHHHHHHhhCCCcCEEE
Q 017457          185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT-DF--INPATCGDKTVSQVIKEMTDGGADYCF  259 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~-~v--~~~~~~~~~~~~~~i~~~~~gg~d~vi  259 (371)
                      +++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+.+ ++.. ..  .|-.+   .+-.+.+.+.....+|+++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~---~~~v~~~~~~~~~~~d~lv   77 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGK-ATYLTGRSESKLSTVTNCLSNNVGYRARDLAS---HQEVEQLFEQLDSIPSTVV   77 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTCSSCCCEEECCTTC---HHHHHHHHHSCSSCCSEEE
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhccCeEeecCCC---HHHHHHHHHHHhhcCCEEE
Confidence            46999998 9999999999889999 89999999988776654 4322 12  23222   2222233222223459999


Q ss_pred             ECCC
Q 017457          260 ECIG  263 (371)
Q Consensus       260 d~~g  263 (371)
                      ++.|
T Consensus        78 ~~Ag   81 (230)
T 3guy_A           78 HSAG   81 (230)
T ss_dssp             ECCC
T ss_pred             EeCC
Confidence            9887

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=96.72  E-value=0.0053  Score=54.04  Aligned_cols=78  Identities=14%  Similarity=0.180  Sum_probs=48.2

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh---HHHHHH----HhCcce-EE--cCCCCCCccHHHHHHHhh
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE---KFEIGK----KFGITD-FI--NPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~---~~~~~~----~lga~~-v~--~~~~~~~~~~~~~i~~~~  251 (371)
                      .++++||+|+ +++|.+.+..+...|+ +|++++++..   +.+.+.    +.|... .+  |-.+  .++..+.+.+..
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~   86 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSN--EEEVAKLFDFAE   86 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCS--HHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHH
Confidence            5789999998 9999999998888999 8998866543   333222    224321 22  2222  122222222222


Q ss_pred             C--CCcCEEEECCC
Q 017457          252 D--GGADYCFECIG  263 (371)
Q Consensus       252 ~--gg~d~vid~~g  263 (371)
                      .  +++|+++++.|
T Consensus        87 ~~~g~iD~lvnnAg  100 (262)
T 3ksu_A           87 KEFGKVDIAINTVG  100 (262)
T ss_dssp             HHHCSEEEEEECCC
T ss_pred             HHcCCCCEEEECCC
Confidence            2  37999999988

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=96.72  E-value=0.0088  Score=53.16  Aligned_cols=96  Identities=13%  Similarity=0.079  Sum_probs=64.0

Q ss_pred             eEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHHhCcceEE-cCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457          186 TVAIFGL-GAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKFGITDFI-NPATCGDKTVSQVIKEMTDGGADYCFECI  262 (371)
Q Consensus       186 ~VLI~G~-g~~G~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~lga~~v~-~~~~~~~~~~~~~i~~~~~gg~d~vid~~  262 (371)
                      +|||+|+ |.+|...++.+... |. +|+++.+++++.+.+...++..+. |..+      .+.+.+... ++|+||++.
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~-~V~~~~R~~~~~~~~~~~~v~~~~~D~~d------~~~l~~~~~-~~d~vi~~a   73 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHID-HFHIGVRNVEKVPDDWRGKVSVRQLDYFN------QESMVEAFK-GMDTVVFIP   73 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCT-TEEEEESSGGGSCGGGBTTBEEEECCTTC------HHHHHHHTT-TCSEEEECC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCC-cEEEEECCHHHHHHhhhCCCEEEEcCCCC------HHHHHHHHh-CCCEEEEeC
Confidence            5899998 99999998888776 88 899999988775544444544332 3222      233444433 799999998


Q ss_pred             CCh-------HHHHHHHHHhhcCC-ceEEEECccC
Q 017457          263 GLT-------SVMNDAFNSSREGW-GKTVILGVEM  289 (371)
Q Consensus       263 g~~-------~~~~~~~~~l~~~~-G~~v~~g~~~  289 (371)
                      +..       .....+++.+...+ ++++.++...
T Consensus        74 ~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~  108 (289)
T 3e48_A           74 SIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYA  108 (289)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred             CCCccchhhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence            742       22455666666541 3788887643

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.71  E-value=0.009  Score=52.21  Aligned_cols=90  Identities=17%  Similarity=0.223  Sum_probs=56.1

Q ss_pred             CCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh-------------------hHHHHHH----HhCcc-eEEcCCCCC
Q 017457          184 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP-------------------EKFEIGK----KFGIT-DFINPATCG  239 (371)
Q Consensus       184 g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~-------------------~~~~~~~----~lga~-~v~~~~~~~  239 (371)
                      +.+|+|+|+|++|..+++.+...|..++++++.+.                   .|.+.+.    ++... .+...... 
T Consensus        31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~-  109 (249)
T 1jw9_B           31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNAL-  109 (249)
T ss_dssp             HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSC-
T ss_pred             CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEecc-
Confidence            57899999999999999999999998999999876                   4554442    22221 22111110 


Q ss_pred             CccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhc
Q 017457          240 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSRE  277 (371)
Q Consensus       240 ~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~  277 (371)
                       -+ .+.+.++.. ++|+|++++++......+.+....
T Consensus       110 -~~-~~~~~~~~~-~~DvVi~~~d~~~~~~~l~~~~~~  144 (249)
T 1jw9_B          110 -LD-DAELAALIA-EHDLVLDCTDNVAVRNQLNAGCFA  144 (249)
T ss_dssp             -CC-HHHHHHHHH-TSSEEEECCSSHHHHHHHHHHHHH
T ss_pred             -CC-HhHHHHHHh-CCCEEEEeCCCHHHHHHHHHHHHH
Confidence             01 112222222 799999999987743344444443

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=96.71  E-value=0.0064  Score=52.81  Aligned_cols=81  Identities=14%  Similarity=0.162  Sum_probs=52.8

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eEEcCCCCCCccHHHHHHHhhC--CC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--GG  254 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~~~~~~~~~~~~~~i~~~~~--gg  254 (371)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+    .+.. ..+..+-.+.++..+.+.+...  ++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLA   82 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4789999998 9999999888888999 99999999877665432    3432 2222111011223333333322  37


Q ss_pred             cCEEEECCCC
Q 017457          255 ADYCFECIGL  264 (371)
Q Consensus       255 ~d~vid~~g~  264 (371)
                      +|+++++.|.
T Consensus        83 id~li~~Ag~   92 (247)
T 3lyl_A           83 IDILVNNAGI   92 (247)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999998874

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=96.71  E-value=0.0068  Score=52.84  Aligned_cols=79  Identities=22%  Similarity=0.248  Sum_probs=51.7

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hHHH-HHHHhCcc-eEE--cCCCCCCccHHHHHHHhhC--CC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP-EKFE-IGKKFGIT-DFI--NPATCGDKTVSQVIKEMTD--GG  254 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~-~~~~-~~~~lga~-~v~--~~~~~~~~~~~~~i~~~~~--gg  254 (371)
                      +++++||+|+ |++|.+.+..+...|+ +|+++++++ ++.+ .+++.+.. ..+  |-.+  .++..+.+.+...  ++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~   82 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQ--PGDVEAFGKQVISTFGR   82 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCchhHHHHHHHhcCCcEEEEEeecCC--HHHHHHHHHHHHHHcCC
Confidence            4789999998 9999999998888999 899999887 6554 34445532 222  2222  1222222222221  37


Q ss_pred             cCEEEECCCC
Q 017457          255 ADYCFECIGL  264 (371)
Q Consensus       255 ~d~vid~~g~  264 (371)
                      +|+++++.|.
T Consensus        83 id~lv~nAg~   92 (249)
T 2ew8_A           83 CDILVNNAGI   92 (249)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999998873

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.71  E-value=0.0073  Score=53.30  Aligned_cols=80  Identities=16%  Similarity=0.299  Sum_probs=52.4

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-H----hCcc-eEE--cCCCCCCccHHHHHHHhhC
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-K----FGIT-DFI--NPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~----lga~-~v~--~~~~~~~~~~~~~i~~~~~  252 (371)
                      -.++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +    .+.. ..+  |-.+  .++..+.+.+...
T Consensus        19 l~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~   95 (267)
T 1vl8_A           19 LRGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSN--YEEVKKLLEAVKE   95 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHH
Confidence            45789999998 9999999998888999 8999999887665432 2    2432 222  3222  1222222222221


Q ss_pred             --CCcCEEEECCCC
Q 017457          253 --GGADYCFECIGL  264 (371)
Q Consensus       253 --gg~d~vid~~g~  264 (371)
                        +++|+++++.|.
T Consensus        96 ~~g~iD~lvnnAg~  109 (267)
T 1vl8_A           96 KFGKLDTVVNAAGI  109 (267)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             HcCCCCEEEECCCc
Confidence              379999998873

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=96.71  E-value=0.011  Score=50.97  Aligned_cols=79  Identities=16%  Similarity=0.175  Sum_probs=51.0

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-----HhCcce-EE--cCCCCCCccHHHHHHHhh--
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-----KFGITD-FI--NPATCGDKTVSQVIKEMT--  251 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-----~lga~~-v~--~~~~~~~~~~~~~i~~~~--  251 (371)
                      +++++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.     ..+... ++  |-.+  .++..+.+.+..  
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~   77 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGY-ALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSK--AESVEEFSKKVLER   77 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTC--HHHHHHHCC-HHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCC--HHHHHHHHHHHHHh
Confidence            3688999998 9999999999999999 8999999988766542     234332 22  2222  111211111111  


Q ss_pred             CCCcCEEEECCCC
Q 017457          252 DGGADYCFECIGL  264 (371)
Q Consensus       252 ~gg~d~vid~~g~  264 (371)
                      -+++|+++++.|.
T Consensus        78 ~g~id~li~~Ag~   90 (235)
T 3l77_A           78 FGDVDVVVANAGL   90 (235)
T ss_dssp             HSSCSEEEECCCC
T ss_pred             cCCCCEEEECCcc
Confidence            1379999998874

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=96.70  E-value=0.0093  Score=52.28  Aligned_cols=78  Identities=13%  Similarity=0.164  Sum_probs=51.3

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-H---hCcc-eEE--cCCCCCCccHHHHHHH---hh
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-K---FGIT-DFI--NPATCGDKTVSQVIKE---MT  251 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~---lga~-~v~--~~~~~~~~~~~~~i~~---~~  251 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+. +   .+.. .++  |-.+  .++..+.+.+   ..
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   84 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSS--RSERQELMNTVANHF   84 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence            5789999998 9999999998888999 9999999887765432 2   2432 122  2222  1122222222   22


Q ss_pred             CCCcCEEEECCC
Q 017457          252 DGGADYCFECIG  263 (371)
Q Consensus       252 ~gg~d~vid~~g  263 (371)
                      ++++|+++++.|
T Consensus        85 ~g~id~lv~~Ag   96 (260)
T 2ae2_A           85 HGKLNILVNNAG   96 (260)
T ss_dssp             TTCCCEEEECCC
T ss_pred             CCCCCEEEECCC
Confidence            257999999887

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=96.70  E-value=0.0065  Score=53.36  Aligned_cols=78  Identities=14%  Similarity=0.166  Sum_probs=51.9

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhCcc-eEE--cCCCCCCccHHHHHHHhhC--CCc
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGIT-DFI--NPATCGDKTVSQVIKEMTD--GGA  255 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga~-~v~--~~~~~~~~~~~~~i~~~~~--gg~  255 (371)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ++... .++  |-.+  .++..+.+.+...  +++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~g~i   82 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQ--PAQWKAAVDTAVTAFGGL   82 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhcCceEEEecCCC--HHHHHHHHHHHHHHcCCC
Confidence            4789999998 9999999998888999 9999999987766543 33321 222  3222  1222222332221  379


Q ss_pred             CEEEECCC
Q 017457          256 DYCFECIG  263 (371)
Q Consensus       256 d~vid~~g  263 (371)
                      |+++++.|
T Consensus        83 D~lv~~Ag   90 (260)
T 1nff_A           83 HVLVNNAG   90 (260)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999887

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=96.69  E-value=0.0053  Score=52.79  Aligned_cols=79  Identities=11%  Similarity=0.068  Sum_probs=51.3

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcceEEcCCCCCCccHHHHHHHhhC--CCcCEEE
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTD--GGADYCF  259 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~--gg~d~vi  259 (371)
                      ++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+.+ ++...++..+-.+.+++.+.+.+...  +++|+++
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   83 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGY-RVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALV   83 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            578999998 9999999998888999 99999998887765543 32222222211011222222222211  3799999


Q ss_pred             ECCC
Q 017457          260 ECIG  263 (371)
Q Consensus       260 d~~g  263 (371)
                      ++.|
T Consensus        84 ~~Ag   87 (234)
T 2ehd_A           84 NNAG   87 (234)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9887

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=96.69  E-value=0.0097  Score=52.63  Aligned_cols=79  Identities=15%  Similarity=0.217  Sum_probs=52.0

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcc-eEE--cCCCCCCccHHHHHH---Hhh
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFI--NPATCGDKTVSQVIK---EMT  251 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~-~v~--~~~~~~~~~~~~~i~---~~~  251 (371)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.    +.+.. ..+  |-.+  .++..+.+.   +..
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   96 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLS--RTERDKLMQTVAHVF   96 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHHc
Confidence            4789999998 9999999999988999 9999999987765432    22432 122  2222  122222222   222


Q ss_pred             CCCcCEEEECCCC
Q 017457          252 DGGADYCFECIGL  264 (371)
Q Consensus       252 ~gg~d~vid~~g~  264 (371)
                      ++++|+++++.|.
T Consensus        97 ~g~id~lv~nAg~  109 (273)
T 1ae1_A           97 DGKLNILVNNAGV  109 (273)
T ss_dssp             TSCCCEEEECCCC
T ss_pred             CCCCcEEEECCCC
Confidence            2579999998874

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=96.69  E-value=0.0045  Score=54.14  Aligned_cols=79  Identities=15%  Similarity=0.133  Sum_probs=52.2

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eEE--cCCCCCCccHHHHHHHhhC-C
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFI--NPATCGDKTVSQVIKEMTD-G  253 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~--~~~~~~~~~~~~~i~~~~~-g  253 (371)
                      +++++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+.+    .|.. .++  |-.+  .++..+.+.+... +
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~g   82 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARN--EDEVTAFLNAADAHA   82 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCC--HHHHHHHHHHHHhhC
Confidence            5789999998 9999999999888999 99999999887655432    2432 222  2222  1222222222111 5


Q ss_pred             CcCEEEECCCC
Q 017457          254 GADYCFECIGL  264 (371)
Q Consensus       254 g~d~vid~~g~  264 (371)
                      ++|+++++.|.
T Consensus        83 ~id~lv~nAg~   93 (252)
T 3h7a_A           83 PLEVTIFNVGA   93 (252)
T ss_dssp             CEEEEEECCCC
T ss_pred             CceEEEECCCc
Confidence            89999998883

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=96.68  E-value=0.012  Score=53.23  Aligned_cols=76  Identities=14%  Similarity=0.177  Sum_probs=51.6

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC---hhHHHHHH-Hh----Cc-ceEEcCCCCCCccHHHHHHHhhC
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN---PEKFEIGK-KF----GI-TDFINPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~---~~~~~~~~-~l----ga-~~v~~~~~~~~~~~~~~i~~~~~  252 (371)
                      -.++++||+|+|++|.+++..+...|+++|+++.++   .++.+.+. ++    +. ..+++.++     . +.+.+...
T Consensus       152 l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~-----~-~~l~~~l~  225 (315)
T 3tnl_A          152 IIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIED-----H-EQLRKEIA  225 (315)
T ss_dssp             CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTC-----H-HHHHHHHH
T ss_pred             ccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccch-----H-HHHHhhhc
Confidence            368899999999999999999999999889999998   66655432 22    22 12333332     1 11222111


Q ss_pred             CCcCEEEECCCC
Q 017457          253 GGADYCFECIGL  264 (371)
Q Consensus       253 gg~d~vid~~g~  264 (371)
                       .+|+||++++-
T Consensus       226 -~aDiIINaTp~  236 (315)
T 3tnl_A          226 -ESVIFTNATGV  236 (315)
T ss_dssp             -TCSEEEECSST
T ss_pred             -CCCEEEECccC
Confidence             68999999874

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=96.67  E-value=0.0015  Score=55.07  Aligned_cols=131  Identities=19%  Similarity=0.263  Sum_probs=77.8

Q ss_pred             cccceee-eecceeEECCCCCCcchhhccccchhhhHHHHHHHc--CCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEE
Q 017457          137 SFTEYSV-VDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVA--GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIG  213 (371)
Q Consensus       137 ~~a~~~~-v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~--~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~  213 (371)
                      .|.+|.. .+....+.+++.+++.....     .+... +....  .+.++++||-+|+|. |..+..+++. +..+|++
T Consensus        17 ~w~~~~~~~~~~~~~~~~~~~~f~~~~~-----~~~~~-~~~~l~~~~~~~~~vLDiG~G~-G~~~~~l~~~-~~~~v~~   88 (205)
T 3grz_A           17 EWEDYQPVFKDQEIIRLDPGLAFGTGNH-----QTTQL-AMLGIERAMVKPLTVADVGTGS-GILAIAAHKL-GAKSVLA   88 (205)
T ss_dssp             TTCCCCCSSTTCEEEEESCC-----CCH-----HHHHH-HHHHHHHHCSSCCEEEEETCTT-SHHHHHHHHT-TCSEEEE
T ss_pred             cccccccCCCCceeEEecCCcccCCCCC-----ccHHH-HHHHHHHhccCCCEEEEECCCC-CHHHHHHHHC-CCCEEEE
Confidence            5677766 66778888888776655321     11111 11111  267889999999876 6777777764 5559999


Q ss_pred             EcCChhHHHHHHH----hCcc--eEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCChH---HHHHHHHHhhcCCceEEE
Q 017457          214 VDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTS---VMNDAFNSSREGWGKTVI  284 (371)
Q Consensus       214 ~~~~~~~~~~~~~----lga~--~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~~~---~~~~~~~~l~~~~G~~v~  284 (371)
                      ++.+++..+.+++    .+..  .++..+-   .+       ...+.+|+|+....-..   .++.+.+.|+++ |.++.
T Consensus        89 vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~---~~-------~~~~~fD~i~~~~~~~~~~~~l~~~~~~L~~g-G~l~~  157 (205)
T 3grz_A           89 TDISDESMTAAEENAALNGIYDIALQKTSL---LA-------DVDGKFDLIVANILAEILLDLIPQLDSHLNED-GQVIF  157 (205)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCCCEEEESST---TT-------TCCSCEEEEEEESCHHHHHHHGGGSGGGEEEE-EEEEE
T ss_pred             EECCHHHHHHHHHHHHHcCCCceEEEeccc---cc-------cCCCCceEEEECCcHHHHHHHHHHHHHhcCCC-CEEEE
Confidence            9999988777765    2432  2222211   11       12248999996544332   245556678887 98887


Q ss_pred             EC
Q 017457          285 LG  286 (371)
Q Consensus       285 ~g  286 (371)
                      ..
T Consensus       158 ~~  159 (205)
T 3grz_A          158 SG  159 (205)
T ss_dssp             EE
T ss_pred             Ee
Confidence            54

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=96.67  E-value=0.0062  Score=53.71  Aligned_cols=79  Identities=16%  Similarity=0.338  Sum_probs=53.1

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-----hCcc-eEE--cCCCCCCccHHHHHHHhhC-
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-----FGIT-DFI--NPATCGDKTVSQVIKEMTD-  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-----lga~-~v~--~~~~~~~~~~~~~i~~~~~-  252 (371)
                      .++++||+|+ +++|.+.++.+...|+ +|++++++.++.+.+.+     .+.. ..+  |-.+  .++..+.+.+... 
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~   95 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGA-RLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAE--PDAPAELARRAAEA   95 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTS--TTHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHH
Confidence            5789999998 9999999999989999 89999999887665422     3432 222  3222  2333333333322 


Q ss_pred             -CCcCEEEECCCC
Q 017457          253 -GGADYCFECIGL  264 (371)
Q Consensus       253 -gg~d~vid~~g~  264 (371)
                       +++|+++++.|.
T Consensus        96 ~g~id~lv~nAg~  108 (266)
T 4egf_A           96 FGGLDVLVNNAGI  108 (266)
T ss_dssp             HTSCSEEEEECCC
T ss_pred             cCCCCEEEECCCc
Confidence             379999998773

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=96.67  E-value=0.0075  Score=53.17  Aligned_cols=79  Identities=16%  Similarity=0.127  Sum_probs=51.5

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhC--cc-eEEcCCCCCCccHHHHHHHhhCCC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFG--IT-DFINPATCGDKTVSQVIKEMTDGG  254 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lg--a~-~v~~~~~~~~~~~~~~i~~~~~gg  254 (371)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.    +.+  .. ..+..+- .+.+..+.+.+.. ++
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~-g~   85 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRREENVNETIKEIRAQYPDAILQPVVADL-GTEQGCQDVIEKY-PK   85 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCT-TSHHHHHHHHHHC-CC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCC-CCHHHHHHHHHhc-CC
Confidence            5789999998 9999999988888999 9999999987655432    222  21 1221111 1133333333222 37


Q ss_pred             cCEEEECCCC
Q 017457          255 ADYCFECIGL  264 (371)
Q Consensus       255 ~d~vid~~g~  264 (371)
                      +|+++++.|.
T Consensus        86 id~lv~nAg~   95 (267)
T 3t4x_A           86 VDILINNLGI   95 (267)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999998874

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=96.67  E-value=0.005  Score=54.75  Aligned_cols=79  Identities=19%  Similarity=0.346  Sum_probs=53.3

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCcc-eEE--cCCCCCCccHHHHHHHhhC--CCc
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGIT-DFI--NPATCGDKTVSQVIKEMTD--GGA  255 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~-~v~--~~~~~~~~~~~~~i~~~~~--gg~  255 (371)
                      .|+++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+ ++++.. ..+  |-.+  .++..+.+.+...  +++
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g~i  104 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADIDGDAADAAATKIGCGAAACRVDVSD--EQQIIAMVDACVAAFGGV  104 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCSSCEEEECCTTC--HHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCcceEEEecCCC--HHHHHHHHHHHHHHcCCC
Confidence            5789999997 9999999988888999 999999998877664 345532 222  3222  1222222222221  379


Q ss_pred             CEEEECCCC
Q 017457          256 DYCFECIGL  264 (371)
Q Consensus       256 d~vid~~g~  264 (371)
                      |+++++.|.
T Consensus       105 D~lvnnAg~  113 (277)
T 3gvc_A          105 DKLVANAGV  113 (277)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998874

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=96.66  E-value=0.0073  Score=53.20  Aligned_cols=79  Identities=15%  Similarity=0.081  Sum_probs=51.9

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-----hCcc--eEE--cCCCCCCccHHHHHHHhhC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-----FGIT--DFI--NPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-----lga~--~v~--~~~~~~~~~~~~~i~~~~~  252 (371)
                      .++++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+.+     .+..  ..+  |-.+  ..+..+.+.+...
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~   83 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLD--ALQVRAFAEACER   83 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCC--HHHHHHHHHHHHH
Confidence            5789999997 9999999998888999 89999999887665432     2221  222  2222  1222222222221


Q ss_pred             --CCcCEEEECCCC
Q 017457          253 --GGADYCFECIGL  264 (371)
Q Consensus       253 --gg~d~vid~~g~  264 (371)
                        +.+|+++++.|.
T Consensus        84 ~~g~id~lvnnAg~   97 (265)
T 3lf2_A           84 TLGCASILVNNAGQ   97 (265)
T ss_dssp             HHCSCSEEEECCCC
T ss_pred             HcCCCCEEEECCCC
Confidence              379999998874

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=96.66  E-value=0.0073  Score=53.37  Aligned_cols=81  Identities=19%  Similarity=0.194  Sum_probs=52.2

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcc-eEEcCCCCCCccHHHHHHHhh--CCC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMT--DGG  254 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~-~v~~~~~~~~~~~~~~i~~~~--~gg  254 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+.    +.+.. .++..+-.+.+...+.+.+..  -++
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  108 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD  108 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence            5789999998 9999999999888999 8999999887665432    22432 222221101122222233222  237


Q ss_pred             cCEEEECCCC
Q 017457          255 ADYCFECIGL  264 (371)
Q Consensus       255 ~d~vid~~g~  264 (371)
                      +|++|++.|.
T Consensus       109 iD~li~~Ag~  118 (272)
T 1yb1_A          109 VSILVNNAGV  118 (272)
T ss_dssp             CSEEEECCCC
T ss_pred             CcEEEECCCc
Confidence            9999998873

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=96.65  E-value=0.006  Score=53.05  Aligned_cols=76  Identities=21%  Similarity=0.213  Sum_probs=51.4

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEE--cCCCCCCccHHHHHHHhhCCCcCEEE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI--NPATCGDKTVSQVIKEMTDGGADYCF  259 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~--~~~~~~~~~~~~~i~~~~~gg~d~vi  259 (371)
                      +++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.++.....+  |-.+   .+..+.+.+.. +++|+++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~---~~~~~~~~~~~-~~id~lv   79 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDVTK---KKQIDQFANEV-ERLDVLF   79 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTTC---HHHHHHHHHHC-SCCSEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhccCceEEEeeCCC---HHHHHHHHHHh-CCCCEEE
Confidence            4789999998 9999999998888999 999999988776554433211222  2222   22222222222 3799999


Q ss_pred             ECCC
Q 017457          260 ECIG  263 (371)
Q Consensus       260 d~~g  263 (371)
                      ++.|
T Consensus        80 ~~Ag   83 (246)
T 2ag5_A           80 NVAG   83 (246)
T ss_dssp             ECCC
T ss_pred             ECCc
Confidence            9887

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=96.65  E-value=0.0028  Score=56.06  Aligned_cols=79  Identities=16%  Similarity=0.153  Sum_probs=51.5

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceE-EcCCCCCCccHHHHHHHhhC--CCcCEE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMTD--GGADYC  258 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~--gg~d~v  258 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|++++++.++.+.+.......+ .|-.+  .++..+.+.+...  +++|++
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g~iD~l   91 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGH-PLLLLARRVERLKALNLPNTLCAQVDVTD--KYTFDTAITRAEKIYGPADAI   91 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHTTCCTTEEEEECCTTC--HHHHHHHHHHHHHHHCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHhhcCCceEEEecCCC--HHHHHHHHHHHHHHCCCCCEE
Confidence            4689999998 9999999998888999 89999998877654432222111 22222  1222222322221  379999


Q ss_pred             EECCCC
Q 017457          259 FECIGL  264 (371)
Q Consensus       259 id~~g~  264 (371)
                      +++.|.
T Consensus        92 vnnAg~   97 (266)
T 3p19_A           92 VNNAGM   97 (266)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            998884

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=96.64  E-value=0.0065  Score=54.53  Aligned_cols=79  Identities=11%  Similarity=0.060  Sum_probs=51.1

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-H---hCc-c-eEE--cCCCCCCc-cHHHHH-HHh
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-K---FGI-T-DFI--NPATCGDK-TVSQVI-KEM  250 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~---lga-~-~v~--~~~~~~~~-~~~~~i-~~~  250 (371)
                      ..++++||+|+ |++|.+.+..+...|+ +|++++++.++.+.+. +   .+. . .++  |-.+   . +..+.+ ...
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~---~~~~v~~~~~~~   85 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTD---PIATMSSLADFI   85 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTS---CHHHHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCC---cHHHHHHHHHHH
Confidence            46789999998 9999999988888999 9999999987755432 2   221 1 122  3222   2 222222 222


Q ss_pred             h--CCCcCEEEECCCC
Q 017457          251 T--DGGADYCFECIGL  264 (371)
Q Consensus       251 ~--~gg~d~vid~~g~  264 (371)
                      .  .+++|++|++.|.
T Consensus        86 ~~~~g~iD~lv~nAg~  101 (311)
T 3o26_A           86 KTHFGKLDILVNNAGV  101 (311)
T ss_dssp             HHHHSSCCEEEECCCC
T ss_pred             HHhCCCCCEEEECCcc
Confidence            1  1379999999884

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=96.64  E-value=0.0069  Score=53.84  Aligned_cols=80  Identities=15%  Similarity=0.181  Sum_probs=51.1

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcce-EE--cCCCCCCccHHHHHHHhhC-
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITD-FI--NPATCGDKTVSQVIKEMTD-  252 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~-v~--~~~~~~~~~~~~~i~~~~~-  252 (371)
                      ..++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+.+    .+... .+  |-.+  .++..+.+.+... 
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~   98 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTS--TDEVHAAVAAAVER   98 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHHHH
Confidence            46789999998 9999999988888999 89999999887665432    34321 22  2222  1222222332222 


Q ss_pred             -CCcCEEEECCCC
Q 017457          253 -GGADYCFECIGL  264 (371)
Q Consensus       253 -gg~d~vid~~g~  264 (371)
                       +++|+++++.|.
T Consensus        99 ~g~id~lv~nAg~  111 (279)
T 3sju_A           99 FGPIGILVNSAGR  111 (279)
T ss_dssp             HCSCCEEEECCCC
T ss_pred             cCCCcEEEECCCC
Confidence             379999998874

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=96.64  E-value=0.0077  Score=53.45  Aligned_cols=77  Identities=17%  Similarity=0.277  Sum_probs=51.7

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhCcc-eEEcCCCCCCccHHHHHHHhhCC--CcCE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGIT-DFINPATCGDKTVSQVIKEMTDG--GADY  257 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga~-~v~~~~~~~~~~~~~~i~~~~~g--g~d~  257 (371)
                      +++++||+|+ +++|.+.++.+...|+ +|++++++.++.+.+. +++.. .++.-+-.+.++..+.+... ..  +.|+
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~-~~~~~id~  106 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGL-GVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAA-NQLGRLRY  106 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHH-TTSSEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHH-HHhCCCCe
Confidence            5789999998 9999999988888999 9999999988877654 35533 22222110112233333333 22  6899


Q ss_pred             EEEC
Q 017457          258 CFEC  261 (371)
Q Consensus       258 vid~  261 (371)
                      ++++
T Consensus       107 lv~~  110 (281)
T 3ppi_A          107 AVVA  110 (281)
T ss_dssp             EEEC
T ss_pred             EEEc
Confidence            9987

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=96.64  E-value=0.012  Score=50.93  Aligned_cols=75  Identities=15%  Similarity=0.148  Sum_probs=52.0

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-h-CcceEEcCCCCCCccHHHHHHHhhCC--CcCE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F-GITDFINPATCGDKTVSQVIKEMTDG--GADY  257 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l-ga~~v~~~~~~~~~~~~~~i~~~~~g--g~d~  257 (371)
                      +++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ . +.. ++..+-   .+ .+.+.++...  .+|+
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~D~---~~-~~~~~~~~~~~~~id~   79 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIE-PVCVDL---GD-WDATEKALGGIGPVDL   79 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCE-EEECCT---TC-HHHHHHHHTTCCCCSE
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCC-cEEecC---CC-HHHHHHHHHHcCCCCE
Confidence            5789999998 9999999999988999 89999998877665543 2 332 232211   12 1233333333  6899


Q ss_pred             EEECCC
Q 017457          258 CFECIG  263 (371)
Q Consensus       258 vid~~g  263 (371)
                      ++++.|
T Consensus        80 vi~~Ag   85 (244)
T 1cyd_A           80 LVNNAA   85 (244)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999987

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=96.63  E-value=0.0046  Score=54.92  Aligned_cols=79  Identities=18%  Similarity=0.212  Sum_probs=52.9

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcc-eEE--cCCCCCCccHHHHHHHhhC--CCc
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT-DFI--NPATCGDKTVSQVIKEMTD--GGA  255 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~-~v~--~~~~~~~~~~~~~i~~~~~--gg~  255 (371)
                      .++++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.+ ++.. ..+  |-.+  .....+.+.+...  +++
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~g~i   80 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGD-TVIGTARRTEALDDLVAAYPDRAEAISLDVTD--GERIDVVAADVLARYGRV   80 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHCTTTEEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCceEEEeeCCC--HHHHHHHHHHHHHhCCCC
Confidence            4689999998 9999999999888999 99999999887666543 4322 222  2222  1222222222221  279


Q ss_pred             CEEEECCCC
Q 017457          256 DYCFECIGL  264 (371)
Q Consensus       256 d~vid~~g~  264 (371)
                      |+++++.|.
T Consensus        81 d~lv~~Ag~   89 (281)
T 3m1a_A           81 DVLVNNAGR   89 (281)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999998873

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=96.63  E-value=0.0032  Score=54.89  Aligned_cols=100  Identities=21%  Similarity=0.197  Sum_probs=65.5

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh--hHHHHHHHhCcceE---EcCCCCCCccHHHHHHHhhCCCcC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP--EKFEIGKKFGITDF---INPATCGDKTVSQVIKEMTDGGAD  256 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~--~~~~~~~~lga~~v---~~~~~~~~~~~~~~i~~~~~gg~d  256 (371)
                      +|+++||+|+ +++|.+.++.....|+ +|+++++++  +..+.+++.|.+..   .|-.+   +.-.+.+  ...+++|
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d---~~~v~~~--~~~g~iD   81 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAPDETLDIIAKDGGNASALLIDFAD---PLAAKDS--FTDAGFD   81 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTS---TTTTTTS--STTTCCC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCC---HHHHHHH--HHhCCCC
Confidence            5899999987 9999999999999999 899998764  34556666665322   22222   2211111  1224899


Q ss_pred             EEEECCCChH-------------------------HHHHHHHHhh-c-CCceEEEECcc
Q 017457          257 YCFECIGLTS-------------------------VMNDAFNSSR-E-GWGKTVILGVE  288 (371)
Q Consensus       257 ~vid~~g~~~-------------------------~~~~~~~~l~-~-~~G~~v~~g~~  288 (371)
                      +++|+.|...                         ..+.+++.|. . .+|++|.+++.
T Consensus        82 iLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~  140 (247)
T 4hp8_A           82 ILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASL  140 (247)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG
T ss_pred             EEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEech
Confidence            9999988410                         2345555553 2 13899999864

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=96.62  E-value=0.0098  Score=52.13  Aligned_cols=78  Identities=12%  Similarity=0.155  Sum_probs=51.7

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eEE--cCCCCCCccHHHHHHHhh---
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFI--NPATCGDKTVSQVIKEMT---  251 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~--~~~~~~~~~~~~~i~~~~---  251 (371)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+    .+.. ..+  |-.+  ..+..+.+.+..   
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~   80 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGA-TVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQ--ESEVRSLFEQVDREQ   80 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTS--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCC--HHHHHHHHHHHHHhc
Confidence            4789999998 9999999998888999 99999998877654422    2432 222  2222  122222333321   


Q ss_pred             CCCcCEEEECCC
Q 017457          252 DGGADYCFECIG  263 (371)
Q Consensus       252 ~gg~d~vid~~g  263 (371)
                      .+.+|+++++.|
T Consensus        81 ~g~id~lvnnAg   92 (260)
T 2qq5_A           81 QGRLDVLVNNAY   92 (260)
T ss_dssp             TTCCCEEEECCC
T ss_pred             CCCceEEEECCc
Confidence            347999999984

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=96.62  E-value=0.0081  Score=53.22  Aligned_cols=80  Identities=18%  Similarity=0.201  Sum_probs=50.1

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH---hCcc-eEEcCCCCCCccHHHHHHHhh--CCCc
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK---FGIT-DFINPATCGDKTVSQVIKEMT--DGGA  255 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~---lga~-~v~~~~~~~~~~~~~~i~~~~--~gg~  255 (371)
                      .|+++||+|+ |++|.+.++.+...|+ +|+++++++...+.+++   .+.. ..+..+- .+.+-.+.+.+..  .+++
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~g~i  107 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGA-HVLAWGRTDGVKEVADEIADGGGSAEAVVADL-ADLEGAANVAEELAATRRV  107 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTHHHHHHHHHHTTTCEEEEEECCT-TCHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCHHHHHHHHHHHHhcCCcEEEEEecC-CCHHHHHHHHHHHHhcCCC
Confidence            5789999998 9999999998888999 89999876544444433   2322 2221111 1122222222211  1379


Q ss_pred             CEEEECCCC
Q 017457          256 DYCFECIGL  264 (371)
Q Consensus       256 d~vid~~g~  264 (371)
                      |+++++.|.
T Consensus       108 D~lv~nAg~  116 (273)
T 3uf0_A          108 DVLVNNAGI  116 (273)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEECCCC
Confidence            999998874

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=96.62  E-value=0.008  Score=52.29  Aligned_cols=79  Identities=15%  Similarity=0.286  Sum_probs=52.2

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCcc--eEE--cCCCCCCccHHHHHHHhh-CCCc
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGIT--DFI--NPATCGDKTVSQVIKEMT-DGGA  255 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~--~v~--~~~~~~~~~~~~~i~~~~-~gg~  255 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+ ++++..  ..+  |-.+  .+...+.+.+.. -+++
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~i   86 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGA-RLILIDREAAALDRAAQELGAAVAARIVADVTD--AEAMTAAAAEAEAVAPV   86 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEEECCTTC--HHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceeEEEEecCC--HHHHHHHHHHHHhhCCC
Confidence            5789999998 9999999998888999 899999998876654 334432  222  2222  112222222211 1479


Q ss_pred             CEEEECCCC
Q 017457          256 DYCFECIGL  264 (371)
Q Consensus       256 d~vid~~g~  264 (371)
                      |++|++.|.
T Consensus        87 d~li~~Ag~   95 (254)
T 2wsb_A           87 SILVNSAGI   95 (254)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEECCcc
Confidence            999998873

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=96.62  E-value=0.0073  Score=54.18  Aligned_cols=82  Identities=12%  Similarity=0.224  Sum_probs=52.1

Q ss_pred             CCCCeEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHHHHHHhhC--
Q 017457          182 EVGSTVAIFGL-G--AVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTD--  252 (371)
Q Consensus       182 ~~g~~VLI~G~-g--~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~~~--  252 (371)
                      -.++++||+|+ |  ++|.+.++.+...|+ +|++++++++..+.+++    .+....+.-+-.+.++..+.+.+...  
T Consensus        28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  106 (296)
T 3k31_A           28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEW  106 (296)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35789999997 5  999998888888999 89999988765444332    34333332221111222222332222  


Q ss_pred             CCcCEEEECCCC
Q 017457          253 GGADYCFECIGL  264 (371)
Q Consensus       253 gg~d~vid~~g~  264 (371)
                      +++|+++++.|.
T Consensus       107 g~iD~lVnnAG~  118 (296)
T 3k31_A          107 GSLDFVVHAVAF  118 (296)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            379999998873

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=96.62  E-value=0.0042  Score=54.45  Aligned_cols=79  Identities=18%  Similarity=0.308  Sum_probs=47.3

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCcc-eEE--cCCCCCCccHHHHHHHhhC--CCc
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGIT-DFI--NPATCGDKTVSQVIKEMTD--GGA  255 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~-~v~--~~~~~~~~~~~~~i~~~~~--gg~  255 (371)
                      +++++||+|+ +++|.+.+..+...|+ +|+++++++++.+.+ ++++.. .++  |-.+  .++..+.+.+...  +++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~i   82 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGA-TVLGLDLKPPAGEEPAAELGAAVRFRNADVTN--EADATAALAFAKQEFGHV   82 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSCC------------CEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence            5789999998 9999999998888999 899999888766554 334432 222  2222  1222222222221  379


Q ss_pred             CEEEECCCC
Q 017457          256 DYCFECIGL  264 (371)
Q Consensus       256 d~vid~~g~  264 (371)
                      |+++++.|.
T Consensus        83 d~lv~nAg~   91 (257)
T 3tpc_A           83 HGLVNCAGT   91 (257)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998873

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=96.61  E-value=0.0064  Score=53.29  Aligned_cols=80  Identities=26%  Similarity=0.315  Sum_probs=52.1

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCcc-eEEcCCCCCCccHHHHHHHhhC--CCcCE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGIT-DFINPATCGDKTVSQVIKEMTD--GGADY  257 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~-~v~~~~~~~~~~~~~~i~~~~~--gg~d~  257 (371)
                      +++++||+|+ |++|.+.+..+...|+ +|++++++.++.+.+ ++++.. .++..+-.+.+++.+.+.+...  +++|+
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   89 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV   89 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            5789999998 9999999999988999 899999887766544 334532 2222111011222222332221  37999


Q ss_pred             EEECCC
Q 017457          258 CFECIG  263 (371)
Q Consensus       258 vid~~g  263 (371)
                      +|++.|
T Consensus        90 li~~Ag   95 (265)
T 2o23_A           90 AVNCAG   95 (265)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999877

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=96.61  E-value=0.0083  Score=52.39  Aligned_cols=80  Identities=16%  Similarity=0.238  Sum_probs=51.0

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcc-eEEcCCCCCCccHHHHHHHhhC--CC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GG  254 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~-~v~~~~~~~~~~~~~~i~~~~~--gg  254 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+.    +.+.. .++..+-.+.+++.+.+.+...  ++
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   90 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGA-RVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGR   90 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            5789999998 9999999998888999 9999999887654432    22432 2222211011222222322211  37


Q ss_pred             cCEEEECCC
Q 017457          255 ADYCFECIG  263 (371)
Q Consensus       255 ~d~vid~~g  263 (371)
                      +|+++++.|
T Consensus        91 id~vi~~Ag   99 (260)
T 3awd_A           91 VDILVACAG   99 (260)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999876

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.61  E-value=0.0097  Score=52.48  Aligned_cols=87  Identities=11%  Similarity=0.090  Sum_probs=63.7

Q ss_pred             CCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCC
Q 017457          184 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG  263 (371)
Q Consensus       184 g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g  263 (371)
                      +++++|+|+|++|.+++..+...|. +|++..++.++.+.+.+++.. +...++     +       .  .+|+||++++
T Consensus       118 ~k~vlvlGaGGaaraia~~L~~~G~-~v~V~nRt~~ka~~la~~~~~-~~~~~~-----l-------~--~~DiVInaTp  181 (269)
T 3phh_A          118 YQNALILGAGGSAKALACELKKQGL-QVSVLNRSSRGLDFFQRLGCD-CFMEPP-----K-------S--AFDLIINATS  181 (269)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCTTHHHHHHHTCE-EESSCC-----S-------S--CCSEEEECCT
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCe-EecHHH-----h-------c--cCCEEEEccc
Confidence            8999999999999999999999995 999999999887766577743 333322     1       0  6899999987


Q ss_pred             Ch-----H-HHHHHHHHhhcCCceEEEECc
Q 017457          264 LT-----S-VMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       264 ~~-----~-~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      ..     . ....+...++++ ..++++..
T Consensus       182 ~Gm~~~~~l~~~~l~~~l~~~-~~v~D~vY  210 (269)
T 3phh_A          182 ASLHNELPLNKEVLKGYFKEG-KLAYDLAY  210 (269)
T ss_dssp             TCCCCSCSSCHHHHHHHHHHC-SEEEESCC
T ss_pred             CCCCCCCCCChHHHHhhCCCC-CEEEEeCC
Confidence            43     1 112223367776 78888865

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=96.60  E-value=0.0074  Score=51.31  Aligned_cols=95  Identities=12%  Similarity=0.112  Sum_probs=62.3

Q ss_pred             eEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCC
Q 017457          186 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL  264 (371)
Q Consensus       186 ~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~  264 (371)
                      +|||+|+ |.+|...++.+...|. +|+++++++++.+.+  .++. ++..+-   .+..+.+.+... ++|+||++.+.
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~--~~~~-~~~~D~---~d~~~~~~~~~~-~~d~vi~~ag~   73 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDY-QIYAGARKVEQVPQY--NNVK-AVHFDV---DWTPEEMAKQLH-GMDAIINVSGS   73 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSC-EEEEEESSGGGSCCC--TTEE-EEECCT---TSCHHHHHTTTT-TCSEEEECCCC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCccchhhc--CCce-EEEecc---cCCHHHHHHHHc-CCCEEEECCcC
Confidence            6999997 9999999999988998 999999988764432  2222 332222   221334554443 79999999885


Q ss_pred             hH---------HHHHHHHHhhcC-CceEEEECcc
Q 017457          265 TS---------VMNDAFNSSREG-WGKTVILGVE  288 (371)
Q Consensus       265 ~~---------~~~~~~~~l~~~-~G~~v~~g~~  288 (371)
                      ..         ....+++.+... .++++.++..
T Consensus        74 ~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~  107 (219)
T 3dqp_A           74 GGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTI  107 (219)
T ss_dssp             TTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             CCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECcc
Confidence            31         234455555543 1488888764

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=96.60  E-value=0.01  Score=53.72  Aligned_cols=98  Identities=12%  Similarity=0.209  Sum_probs=69.5

Q ss_pred             HHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh----Ccc---eEEcCCCCCCccHHHHHH
Q 017457          176 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GIT---DFINPATCGDKTVSQVIK  248 (371)
Q Consensus       176 ~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l----ga~---~v~~~~~~~~~~~~~~i~  248 (371)
                      .....+.++++||-+|+|. |..+..+++..|+ +|++++.+++..+.+++.    |..   .++..      ++    .
T Consensus        83 ~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~------d~----~  150 (318)
T 2fk8_A           83 LDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQ------GW----E  150 (318)
T ss_dssp             HTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES------CG----G
T ss_pred             HHhcCCCCcCEEEEEcccc-hHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC------Ch----H
Confidence            3445678999999999977 8888889988798 999999999988887653    321   22211      11    1


Q ss_pred             HhhCCCcCEEEEC-----CCC---hHHHHHHHHHhhcCCceEEEECc
Q 017457          249 EMTDGGADYCFEC-----IGL---TSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       249 ~~~~gg~d~vid~-----~g~---~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      ++ ++.+|+|+..     .+.   ...+..+.+.|+++ |+++....
T Consensus       151 ~~-~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  195 (318)
T 2fk8_A          151 DF-AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPAD-GRMTVQSS  195 (318)
T ss_dssp             GC-CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTT-CEEEEEEE
T ss_pred             HC-CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCC-cEEEEEEe
Confidence            11 2479999865     332   23478888999998 99887654

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=96.59  E-value=0.0062  Score=52.76  Aligned_cols=80  Identities=16%  Similarity=0.260  Sum_probs=51.7

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-----hCcc-eEEcCCCCCCccHHHHHHHhh--CC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-----FGIT-DFINPATCGDKTVSQVIKEMT--DG  253 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-----lga~-~v~~~~~~~~~~~~~~i~~~~--~g  253 (371)
                      +++++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+     .+.. .++..+-.+..++.+.+.+..  -+
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGS-TVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVD   84 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            4788999998 9999999998888999 99999998877655432     2432 222211101122222233222  23


Q ss_pred             CcCEEEECCC
Q 017457          254 GADYCFECIG  263 (371)
Q Consensus       254 g~d~vid~~g  263 (371)
                      ++|++|++.|
T Consensus        85 ~~d~vi~~Ag   94 (248)
T 2pnf_A           85 GIDILVNNAG   94 (248)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999887

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=96.58  E-value=0.0039  Score=54.90  Aligned_cols=79  Identities=11%  Similarity=0.030  Sum_probs=51.9

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHH-HHHHHhCcceE-EcCCCCCCccHHHHHHHhh--CCCcCE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKF-EIGKKFGITDF-INPATCGDKTVSQVIKEMT--DGGADY  257 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~-~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~--~gg~d~  257 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|+++++++++. +.+.+.++..+ .|-.+  .++..+.+.+..  -+++|+
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~iD~  102 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGH-RVIISYRTEHASVTELRQAGAVALYGDFSC--ETGIMAFIDLLKTQTSSLRA  102 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESSCCHHHHHHHHHTCEEEECCTTS--HHHHHHHHHHHHHHCSCCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHhcCCeEEECCCCC--HHHHHHHHHHHHHhcCCCCE
Confidence            4689999998 9999999998888999 899999887653 34555664332 23222  122222233222  137999


Q ss_pred             EEECCCC
Q 017457          258 CFECIGL  264 (371)
Q Consensus       258 vid~~g~  264 (371)
                      ++++.|.
T Consensus       103 lv~nAg~  109 (260)
T 3gem_A          103 VVHNASE  109 (260)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9998873

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=96.58  E-value=0.00086  Score=57.03  Aligned_cols=100  Identities=16%  Similarity=0.216  Sum_probs=70.1

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcC--CCeEEEEcCChhHHHHHHH----hCcce--EEcCCCCCCccHHHH
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR--ASKIIGVDINPEKFEIGKK----FGITD--FINPATCGDKTVSQV  246 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g--~~~Vi~~~~~~~~~~~~~~----lga~~--v~~~~~~~~~~~~~~  246 (371)
                      +.....+.++++||.+|+|. |..+..+++..|  . +|++++.+++..+.+++    .|...  +...      +... 
T Consensus        69 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~------d~~~-  139 (215)
T 2yxe_A           69 MCELLDLKPGMKVLEIGTGC-GYHAAVTAEIVGEDG-LVVSIERIPELAEKAERTLRKLGYDNVIVIVG------DGTL-  139 (215)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTS-EEEEEESCHHHHHHHHHHHHHHTCTTEEEEES------CGGG-
T ss_pred             HHHhhCCCCCCEEEEECCCc-cHHHHHHHHHhCCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCeEEEEC------Cccc-
Confidence            34456788999999999984 888889998876  5 99999999988777765    34322  2211      1111 


Q ss_pred             HHHhh-CCCcCEEEECCCChHHHHHHHHHhhcCCceEEEEC
Q 017457          247 IKEMT-DGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       247 i~~~~-~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                        .+. .+.+|+|+....-....+.+.+.|+++ |+++..-
T Consensus       140 --~~~~~~~fD~v~~~~~~~~~~~~~~~~L~pg-G~lv~~~  177 (215)
T 2yxe_A          140 --GYEPLAPYDRIYTTAAGPKIPEPLIRQLKDG-GKLLMPV  177 (215)
T ss_dssp             --CCGGGCCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEEE
T ss_pred             --CCCCCCCeeEEEECCchHHHHHHHHHHcCCC-cEEEEEE
Confidence              111 237999997766555457888999998 9887664

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=96.58  E-value=0.0084  Score=52.58  Aligned_cols=80  Identities=16%  Similarity=0.259  Sum_probs=50.7

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH-HHHHH-Hh----Ccc-eEEcCCCCCCccHHHHHHHhhC--
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-FEIGK-KF----GIT-DFINPATCGDKTVSQVIKEMTD--  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~-~~~~~-~l----ga~-~v~~~~~~~~~~~~~~i~~~~~--  252 (371)
                      +++++||+|+ |++|.+.+..+...|+ +|+++++++++ .+.+. ++    +.. ..+..+-.+.+++.+.+.+...  
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            4789999998 9999999998888999 89999988766 44432 22    433 2222111011222222222221  


Q ss_pred             CCcCEEEECCC
Q 017457          253 GGADYCFECIG  263 (371)
Q Consensus       253 gg~d~vid~~g  263 (371)
                      +++|+++++.|
T Consensus        82 g~iD~lv~~Ag   92 (260)
T 1x1t_A           82 GRIDILVNNAG   92 (260)
T ss_dssp             SCCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37999999887

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=96.58  E-value=0.014  Score=52.61  Aligned_cols=89  Identities=19%  Similarity=0.241  Sum_probs=65.8

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      -.|++|.|+|.|.+|...++.++..|. +|++.+++.++ +.+.+.|+...         ++.+.+.     ..|+|+.+
T Consensus       140 l~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~~---------~l~ell~-----~aDvV~l~  203 (307)
T 1wwk_A          140 LEGKTIGIIGFGRIGYQVAKIANALGM-NILLYDPYPNE-ERAKEVNGKFV---------DLETLLK-----ESDVVTIH  203 (307)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHTTCEEC---------CHHHHHH-----HCSEEEEC
T ss_pred             cCCceEEEEccCHHHHHHHHHHHHCCC-EEEEECCCCCh-hhHhhcCcccc---------CHHHHHh-----hCCEEEEe
Confidence            357899999999999999999999999 99999988776 55666776421         2222222     47999988


Q ss_pred             CCChH----HH-HHHHHHhhcCCceEEEECc
Q 017457          262 IGLTS----VM-NDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       262 ~g~~~----~~-~~~~~~l~~~~G~~v~~g~  287 (371)
                      ++...    .+ ...+..++++ +.++.++.
T Consensus       204 ~p~~~~t~~li~~~~l~~mk~g-a~lin~ar  233 (307)
T 1wwk_A          204 VPLVESTYHLINEERLKLMKKT-AILINTSR  233 (307)
T ss_dssp             CCCSTTTTTCBCHHHHHHSCTT-CEEEECSC
T ss_pred             cCCChHHhhhcCHHHHhcCCCC-eEEEECCC
Confidence            77422    12 4567788887 88888875

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=96.57  E-value=0.011  Score=53.46  Aligned_cols=76  Identities=17%  Similarity=0.176  Sum_probs=51.0

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC---hhHHHHH-HHhC----cc-eEEcCCCCCCccH-HHHHHHhh
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN---PEKFEIG-KKFG----IT-DFINPATCGDKTV-SQVIKEMT  251 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~---~~~~~~~-~~lg----a~-~v~~~~~~~~~~~-~~~i~~~~  251 (371)
                      -.++++||+|+|++|.+++..+...|+++|+++.++   .++.+.+ ++++    .. .+++..+   .+. .+.+.   
T Consensus       146 l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~---l~~~~~~l~---  219 (312)
T 3t4e_A          146 MRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLAD---QHAFTEALA---  219 (312)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTC---HHHHHHHHH---
T ss_pred             cCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHh---hhhhHhhcc---
Confidence            358899999999999999999999999889999999   5555443 2232    21 2333222   111 11221   


Q ss_pred             CCCcCEEEECCCCh
Q 017457          252 DGGADYCFECIGLT  265 (371)
Q Consensus       252 ~gg~d~vid~~g~~  265 (371)
                        .+|+||++++..
T Consensus       220 --~~DiIINaTp~G  231 (312)
T 3t4e_A          220 --SADILTNGTKVG  231 (312)
T ss_dssp             --HCSEEEECSSTT
T ss_pred             --CceEEEECCcCC
Confidence              589999998753

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=96.57  E-value=0.0082  Score=53.12  Aligned_cols=81  Identities=17%  Similarity=0.252  Sum_probs=52.5

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcce-EEcCCCCCCccHHHHHHHhh--CCC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMT--DGG  254 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~~-v~~~~~~~~~~~~~~i~~~~--~gg  254 (371)
                      .|+++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.    +.|... ++..+-.+.++..+.+.+..  .++
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  103 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGID  103 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence            5789999998 9999999998889999 9999999988765543    234332 22111101122222222222  237


Q ss_pred             cCEEEECCCC
Q 017457          255 ADYCFECIGL  264 (371)
Q Consensus       255 ~d~vid~~g~  264 (371)
                      +|+++++.|.
T Consensus       104 iD~lv~nAg~  113 (271)
T 4ibo_A          104 VDILVNNAGI  113 (271)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999998873

>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1

Probab=96.56  E-value=0.011  Score=53.52  Aligned_cols=92  Identities=16%  Similarity=0.228  Sum_probs=63.9

Q ss_pred             CeEEEEcCChHHHHHHHHH-H-HcCCCeEEEEcCChhH--HHHHHHhCcceEEcCCCCCCccHHHHHHHhhCC-CcCEEE
Q 017457          185 STVAIFGLGAVGLAVAEGA-R-LNRASKIIGVDINPEK--FEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCF  259 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la-~-~~g~~~Vi~~~~~~~~--~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g-g~d~vi  259 (371)
                      -+|.|+|+|.+|...+..+ + .-++..+.++++++++  .+.++++|.....        +..+.+.+.+.+ ++|+|+
T Consensus         5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~--------~~~e~ll~~~~~~~iDvV~   76 (312)
T 1nvm_B            5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY--------AGVEGLIKLPEFADIDFVF   76 (312)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES--------SHHHHHHHSGGGGGEEEEE
T ss_pred             CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCccc--------CCHHHHHhccCCCCCcEEE
Confidence            4789999999999888877 4 3466445566666665  5666778864221        223344443333 799999


Q ss_pred             ECCCChHHHHHHHHHhhc--CCceEEEE
Q 017457          260 ECIGLTSVMNDAFNSSRE--GWGKTVIL  285 (371)
Q Consensus       260 d~~g~~~~~~~~~~~l~~--~~G~~v~~  285 (371)
                      ++++.....+.+..++..  + .++++.
T Consensus        77 ~atp~~~h~~~a~~al~a~~G-k~Vi~e  103 (312)
T 1nvm_B           77 DATSASAHVQNEALLRQAKPG-IRLIDL  103 (312)
T ss_dssp             ECSCHHHHHHHHHHHHHHCTT-CEEEEC
T ss_pred             ECCChHHHHHHHHHHHHhCCC-CEEEEc
Confidence            999987778888888888  7 777663

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=96.56  E-value=0.0052  Score=52.62  Aligned_cols=102  Identities=16%  Similarity=0.188  Sum_probs=69.5

Q ss_pred             HcCCCCCCeEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHH----hCcc---eEEcCCCCCCccHHHHHHH
Q 017457          178 VAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIKE  249 (371)
Q Consensus       178 ~~~~~~g~~VLI~G~g~~G~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~----lga~---~v~~~~~~~~~~~~~~i~~  249 (371)
                      .....++++||-+|+| .|..++.+++.++ ..+|++++.+++..+.+++    .|..   .++.      .+..+.+.+
T Consensus        64 l~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~------~d~~~~~~~  136 (229)
T 2avd_A           64 LARLIQAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRL------KPALETLDE  136 (229)
T ss_dssp             HHHHTTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEE------SCHHHHHHH
T ss_pred             HHHhcCCCEEEEEcCC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEE------cCHHHHHHH
Confidence            3456788999999987 5888889998763 3399999999988777765    3431   2222      234444444


Q ss_pred             hhC----CCcCEEEECCCC---hHHHHHHHHHhhcCCceEEEECc
Q 017457          250 MTD----GGADYCFECIGL---TSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       250 ~~~----gg~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      +..    +.+|+|+.....   ...++.+.+.|+++ |.++....
T Consensus       137 ~~~~~~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pg-G~lv~~~~  180 (229)
T 2avd_A          137 LLAAGEAGTFDVAVVDADKENCSAYYERCLQLLRPG-GILAVLRV  180 (229)
T ss_dssp             HHHTTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             HHhcCCCCCccEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEECC
Confidence            432    479999844332   23478889999998 99887653

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=96.56  E-value=0.0042  Score=54.20  Aligned_cols=104  Identities=13%  Similarity=0.128  Sum_probs=69.1

Q ss_pred             cCCCCCCeEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHHHHHHhhCC
Q 017457          179 AGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTDG  253 (371)
Q Consensus       179 ~~~~~g~~VLI~G~g~~G~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~~~g  253 (371)
                      ....++++||-+|+|. |..++.+|+.++ ..+|++++.+++..+.+++    .|...-+....   .+..+.+..+...
T Consensus        59 ~~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~---~d~~~~l~~~~~~  134 (248)
T 3tfw_A           59 VRLTQAKRILEIGTLG-GYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLRE---GPALQSLESLGEC  134 (248)
T ss_dssp             HHHHTCSEEEEECCTT-SHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEE---SCHHHHHHTCCSC
T ss_pred             HhhcCCCEEEEecCCc-hHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHHHHHhcCCC
Confidence            3567789999999876 788888898864 3399999999988877765    35331111111   3444444444333


Q ss_pred             -CcCEEEECCCC---hHHHHHHHHHhhcCCceEEEECc
Q 017457          254 -GADYCFECIGL---TSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       254 -g~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                       .||+|+-....   ...++.+.+.|+++ |.++.-..
T Consensus       135 ~~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~~~~  171 (248)
T 3tfw_A          135 PAFDLIFIDADKPNNPHYLRWALRYSRPG-TLIIGDNV  171 (248)
T ss_dssp             CCCSEEEECSCGGGHHHHHHHHHHTCCTT-CEEEEECC
T ss_pred             CCeEEEEECCchHHHHHHHHHHHHhcCCC-eEEEEeCC
Confidence             79999832222   23478888999998 98877554

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=96.55  E-value=0.007  Score=53.54  Aligned_cols=78  Identities=17%  Similarity=0.170  Sum_probs=51.9

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcc-eE--EcCCCCCCccHHHHHHHhhC--
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DF--INPATCGDKTVSQVIKEMTD--  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~-~v--~~~~~~~~~~~~~~i~~~~~--  252 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+.    +.+.. ..  .|-.+  ..+..+.+.+...  
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~  103 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGA-MVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVND--ATAVDALVESTLKEF  103 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCC--HHHHHHHHHHHHHHc
Confidence            5789999998 9999999988888999 9999999987765543    23422 22  23222  1222222222222  


Q ss_pred             CCcCEEEECCC
Q 017457          253 GGADYCFECIG  263 (371)
Q Consensus       253 gg~d~vid~~g  263 (371)
                      +++|+++++.|
T Consensus       104 g~iD~lvnnAg  114 (270)
T 3ftp_A          104 GALNVLVNNAG  114 (270)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37999999887

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.55  E-value=0.0058  Score=54.94  Aligned_cols=95  Identities=12%  Similarity=0.002  Sum_probs=63.9

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCcc--eEEcCCCCCCccHHHHHHHhhCCCcCEE
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGIT--DFINPATCGDKTVSQVIKEMTDGGADYC  258 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~--~v~~~~~~~~~~~~~~i~~~~~gg~d~v  258 (371)
                      .++++++|+|+|++|.+++..+...|+.+|++..++.++.+.+ ++++..  .++        ++ +.+.+.. +.+|+|
T Consensus       139 l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~--------~~-~~~~~~~-~~aDiv  208 (297)
T 2egg_A          139 LDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYF--------SL-AEAETRL-AEYDII  208 (297)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEE--------CH-HHHHHTG-GGCSEE
T ss_pred             CCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCcee--------eH-HHHHhhh-ccCCEE
Confidence            3678999999999999999999999987899999998886654 445542  222        12 1233322 269999


Q ss_pred             EECCCChHHH-----HHHHHHhhcCCceEEEECc
Q 017457          259 FECIGLTSVM-----NDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       259 id~~g~~~~~-----~~~~~~l~~~~G~~v~~g~  287 (371)
                      +++++.....     ......++++ ..++++..
T Consensus       209 In~t~~~~~~~~~~~~i~~~~l~~~-~~v~D~~y  241 (297)
T 2egg_A          209 INTTSVGMHPRVEVQPLSLERLRPG-VIVSDIIY  241 (297)
T ss_dssp             EECSCTTCSSCCSCCSSCCTTCCTT-CEEEECCC
T ss_pred             EECCCCCCCCCCCCCCCCHHHcCCC-CEEEEcCC
Confidence            9999865410     0012345565 67777765

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=96.55  E-value=0.011  Score=52.64  Aligned_cols=81  Identities=21%  Similarity=0.286  Sum_probs=50.1

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHHHHHH----h-Ccc-eEEcCCCCCCccHHHHHHHhhC--
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIGKK----F-GIT-DFINPATCGDKTVSQVIKEMTD--  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~-~~~~~~~~~~----l-ga~-~v~~~~~~~~~~~~~~i~~~~~--  252 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|+++++ ++++.+.+.+    . +.. ..+..+-.+.++..+.+.+...  
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  102 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGA-NIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRF  102 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHC
Confidence            4689999998 9999999999889999 9999988 5555444322    2 322 2222111011222222222221  


Q ss_pred             CCcCEEEECCCC
Q 017457          253 GGADYCFECIGL  264 (371)
Q Consensus       253 gg~d~vid~~g~  264 (371)
                      +++|+++++.|.
T Consensus       103 g~iD~lv~nAg~  114 (281)
T 3v2h_A          103 GGADILVNNAGV  114 (281)
T ss_dssp             SSCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999998874

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=96.53  E-value=0.0078  Score=57.71  Aligned_cols=91  Identities=22%  Similarity=0.237  Sum_probs=69.0

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      .-.|++|.|+|.|.+|...++.++.+|+ +|++.+++..+...+...|.. +        .++.    ++.. ..|+|+.
T Consensus       274 ~L~GktVgIIG~G~IG~~vA~~l~~~G~-~V~v~d~~~~~~~~a~~~G~~-~--------~~l~----ell~-~aDiVi~  338 (494)
T 3d64_A          274 MIAGKIAVVAGYGDVGKGCAQSLRGLGA-TVWVTEIDPICALQAAMEGYR-V--------VTME----YAAD-KADIFVT  338 (494)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSCHHHHHHHHTTTCE-E--------CCHH----HHTT-TCSEEEE
T ss_pred             ccCCCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCChHhHHHHHHcCCE-e--------CCHH----HHHh-cCCEEEE
Confidence            4578999999999999999999999999 999999998775444445653 1        1222    2222 6899999


Q ss_pred             CCCChHHH-HHHHHHhhcCCceEEEECc
Q 017457          261 CIGLTSVM-NDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       261 ~~g~~~~~-~~~~~~l~~~~G~~v~~g~  287 (371)
                      +++....+ ...+..|+++ ..++.++.
T Consensus       339 ~~~t~~lI~~~~l~~MK~g-AilINvgr  365 (494)
T 3d64_A          339 ATGNYHVINHDHMKAMRHN-AIVCNIGH  365 (494)
T ss_dssp             CSSSSCSBCHHHHHHCCTT-EEEEECSS
T ss_pred             CCCcccccCHHHHhhCCCC-cEEEEcCC
Confidence            88655433 4678889997 89998886

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=96.53  E-value=0.0076  Score=53.53  Aligned_cols=79  Identities=20%  Similarity=0.313  Sum_probs=52.1

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCc---c-eEE--cCCCCCCccHHHHHHHhh
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGI---T-DFI--NPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga---~-~v~--~~~~~~~~~~~~~i~~~~  251 (371)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.    +.+.   . .++  |-.+  .++..+.+.+..
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~   86 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITN--EDETARAVDAVT   86 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTS--HHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCC--HHHHHHHHHHHH
Confidence            5789999998 9999999998888999 9999999987765442    2332   1 122  2222  122222233222


Q ss_pred             C--CCcCEEEECCCC
Q 017457          252 D--GGADYCFECIGL  264 (371)
Q Consensus       252 ~--gg~d~vid~~g~  264 (371)
                      .  +++|+++++.|.
T Consensus        87 ~~~g~id~lv~nAg~  101 (281)
T 3svt_A           87 AWHGRLHGVVHCAGG  101 (281)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HHcCCCCEEEECCCc
Confidence            2  379999998884

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=96.52  E-value=0.025  Score=51.80  Aligned_cols=130  Identities=13%  Similarity=0.110  Sum_probs=80.5

Q ss_pred             CeEEEEcCChHHHHHHHHHH-H-cCCCeEEEEcCChhHHHHH-HHhCcceEEcCCCCCCccHHHHHHHhhCC-CcCEEEE
Q 017457          185 STVAIFGLGAVGLAVAEGAR-L-NRASKIIGVDINPEKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFE  260 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la~-~-~g~~~Vi~~~~~~~~~~~~-~~lga~~v~~~~~~~~~~~~~~i~~~~~g-g~d~vid  260 (371)
                      -+|.|+|+|.+|...++.++ . .+++.|.+.++++++.+.+ +++|+..+++       ++.+    +... .+|+|+.
T Consensus         9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~-------~~~~----~l~~~~~D~V~i   77 (346)
T 3cea_A            9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYT-------NYKD----MIDTENIDAIFI   77 (346)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEES-------CHHH----HHTTSCCSEEEE
T ss_pred             ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccC-------CHHH----HhcCCCCCEEEE
Confidence            47899999999998877776 4 4672345668888877654 5577755542       3322    2233 7999999


Q ss_pred             CCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHH---HHh-----c-CceEEEeeccCCCchhhHHHHHHHHHcC
Q 017457          261 CIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI---EIL-----K-GRSVCGTYFGGLKPRSDIATLAQKYLDK  331 (371)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~---~~~-----~-~~~~~g~~~~~~~~~~~~~~~~~~~~~g  331 (371)
                      |++.....+.+..+++.  |.-+.+...     +..+..   .+.     . +..+.-.  ...+....+..+.+++++|
T Consensus        78 ~tp~~~h~~~~~~al~~--G~~v~~eKp-----~~~~~~~~~~l~~~a~~~~~~~~~~~--~~~r~~p~~~~~~~~i~~g  148 (346)
T 3cea_A           78 VAPTPFHPEMTIYAMNA--GLNVFCEKP-----LGLDFNEVDEMAKVIKSHPNQIFQSG--FMRRYDDSYRYAKKIVDNG  148 (346)
T ss_dssp             CSCGGGHHHHHHHHHHT--TCEEEECSC-----CCSCHHHHHHHHHHHHTCTTSCEECC--CGGGTCHHHHHHHHHHHTT
T ss_pred             eCChHhHHHHHHHHHHC--CCEEEEcCC-----CCCCHHHHHHHHHHHHhCCCCeEEEe--cccccCHHHHHHHHHHHcC
Confidence            99988778888888887  455555431     112221   122     1 2333322  2222235688888999988


Q ss_pred             CCC
Q 017457          332 ELN  334 (371)
Q Consensus       332 ~~~  334 (371)
                      .+-
T Consensus       149 ~iG  151 (346)
T 3cea_A          149 DIG  151 (346)
T ss_dssp             TTC
T ss_pred             CCC
Confidence            653

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=96.52  E-value=0.0073  Score=53.58  Aligned_cols=79  Identities=19%  Similarity=0.178  Sum_probs=51.9

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcc-eEE--cCCCCCCccHHHHHHHhhC-C
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFI--NPATCGDKTVSQVIKEMTD-G  253 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~-~v~--~~~~~~~~~~~~~i~~~~~-g  253 (371)
                      .|+++||+|+ +++|.+.+..+...|+ +|+++++++++.+.+.    +.+.. ..+  |-.+  ..+..+.+.+... +
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~g  108 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSE--AGAGTDLIERAEAIA  108 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTS--TTHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCC--HHHHHHHHHHHHHhC
Confidence            5789999998 9999999998888999 9999998877654432    23432 222  2222  1222222222211 4


Q ss_pred             CcCEEEECCCC
Q 017457          254 GADYCFECIGL  264 (371)
Q Consensus       254 g~d~vid~~g~  264 (371)
                      ++|+++++.|.
T Consensus       109 ~iD~lvnnAg~  119 (275)
T 4imr_A          109 PVDILVINASA  119 (275)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            89999998883

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.52  E-value=0.016  Score=50.37  Aligned_cols=74  Identities=18%  Similarity=0.145  Sum_probs=51.1

Q ss_pred             CCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEE-cCCCCCCccHHHHHHHhhCCCcCE
Q 017457          180 GVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI-NPATCGDKTVSQVIKEMTDGGADY  257 (371)
Q Consensus       180 ~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~-~~~~~~~~~~~~~i~~~~~gg~d~  257 (371)
                      ...+++++||+|+ |++|.+.++.+...|+ +|++++++++..   ++++...++ |- .   .+..+.+.+..  ++|+
T Consensus        15 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~---~~~~~~~~~~D~-~---~~~~~~~~~~~--~iD~   84 (249)
T 1o5i_A           15 LGIRDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEELL---KRSGHRYVVCDL-R---KDLDLLFEKVK--EVDI   84 (249)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHH---HHTCSEEEECCT-T---TCHHHHHHHSC--CCSE
T ss_pred             hccCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHH---HhhCCeEEEeeH-H---HHHHHHHHHhc--CCCE
Confidence            3456889999998 9999999998888999 899999887443   334432222 22 1   34433333332  7999


Q ss_pred             EEECCC
Q 017457          258 CFECIG  263 (371)
Q Consensus       258 vid~~g  263 (371)
                      ++++.|
T Consensus        85 lv~~Ag   90 (249)
T 1o5i_A           85 LVLNAG   90 (249)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999887

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=96.51  E-value=0.014  Score=51.72  Aligned_cols=92  Identities=9%  Similarity=-0.021  Sum_probs=62.0

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCc--ceEEcCCCCCCccHHHHHHHhhCCCcCEEE
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGI--TDFINPATCGDKTVSQVIKEMTDGGADYCF  259 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga--~~v~~~~~~~~~~~~~~i~~~~~gg~d~vi  259 (371)
                      .+++++|+|+|++|.+++..+...|+.+|+++.++.++.+.+ ++++.  ..+...++     +       ....+|+||
T Consensus       119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~-----l-------~~~~~DivI  186 (272)
T 3pwz_A          119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEA-----L-------EGQSFDIVV  186 (272)
T ss_dssp             TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGG-----G-------TTCCCSEEE
T ss_pred             cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHH-----h-------cccCCCEEE
Confidence            688999999999999999888889977999999999886654 44443  22332221     1       113799999


Q ss_pred             ECCCChHHHH---HHHHHhhcCCceEEEECc
Q 017457          260 ECIGLTSVMN---DAFNSSREGWGKTVILGV  287 (371)
Q Consensus       260 d~~g~~~~~~---~~~~~l~~~~G~~v~~g~  287 (371)
                      ++++....-+   .....++++ ..++++..
T Consensus       187 naTp~gm~~~~~~i~~~~l~~~-~~V~DlvY  216 (272)
T 3pwz_A          187 NATSASLTADLPPLPADVLGEA-ALAYELAY  216 (272)
T ss_dssp             ECSSGGGGTCCCCCCGGGGTTC-SEEEESSC
T ss_pred             ECCCCCCCCCCCCCCHHHhCcC-CEEEEeec
Confidence            9988543100   012346665 66677754

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=96.51  E-value=0.0092  Score=52.76  Aligned_cols=78  Identities=9%  Similarity=0.007  Sum_probs=50.3

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHHHHHH-h----Ccc-eEE--cCCCCCC----ccHHHHHH
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIGKK-F----GIT-DFI--NPATCGD----KTVSQVIK  248 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~-~~~~~~~~~~-l----ga~-~v~--~~~~~~~----~~~~~~i~  248 (371)
                      +++++||+|+ |++|.+.+..+...|+ +|+++++ ++++.+.+.+ +    +.. .++  |-.+  .    +...+.+.
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~   86 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSL--SSSLLDCCEDIID   86 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSS--STTHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCC--ccccHHHHHHHHH
Confidence            4689999998 9999999998888999 9999998 7776554422 2    432 222  3222  1    12222222


Q ss_pred             HhhC--CCcCEEEECCC
Q 017457          249 EMTD--GGADYCFECIG  263 (371)
Q Consensus       249 ~~~~--gg~d~vid~~g  263 (371)
                      +...  +++|++|++.|
T Consensus        87 ~~~~~~g~id~lv~nAg  103 (276)
T 1mxh_A           87 CSFRAFGRCDVLVNNAS  103 (276)
T ss_dssp             HHHHHHSCCCEEEECCC
T ss_pred             HHHHhcCCCCEEEECCC
Confidence            2211  37999999887

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=96.50  E-value=0.0028  Score=57.03  Aligned_cols=99  Identities=15%  Similarity=0.229  Sum_probs=70.8

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh----Ccc---eEEcCCCCCCccHHHHH
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GIT---DFINPATCGDKTVSQVI  247 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l----ga~---~v~~~~~~~~~~~~~~i  247 (371)
                      +.....++++++||-+|+|. |..+..+++..|. +|++++.+++..+.+++.    |..   .++..      ++    
T Consensus        64 ~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~------d~----  131 (302)
T 3hem_A           64 ALDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQ------GW----  131 (302)
T ss_dssp             HHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEEC------CG----
T ss_pred             HHHHcCCCCcCEEEEeeccC-cHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC------CH----
Confidence            34456788999999999986 8888899998887 999999999888777653    322   12221      22    


Q ss_pred             HHhhCCCcCEEEECCC-----C----------hHHHHHHHHHhhcCCceEEEECc
Q 017457          248 KEMTDGGADYCFECIG-----L----------TSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       248 ~~~~~gg~d~vid~~g-----~----------~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      .++ .+.+|+|+....     +          ...+..+.+.|+|+ |+++....
T Consensus       132 ~~~-~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~  184 (302)
T 3hem_A          132 EEF-DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDD-GRMLLHTI  184 (302)
T ss_dssp             GGC-CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTT-CEEEEEEE
T ss_pred             HHc-CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCC-cEEEEEEE
Confidence            122 458999986322     1          24478889999998 99987764

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=96.50  E-value=0.0037  Score=54.00  Aligned_cols=96  Identities=13%  Similarity=0.097  Sum_probs=62.8

Q ss_pred             CeEEEEcC-ChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457          185 STVAIFGL-GAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  262 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~  262 (371)
                      ++|||+|+ |.+|.+.++.+...| + +|+++++++++.+.+...++..+ ..+-   .+ .+.+.+... ++|+||++.
T Consensus        24 k~vlVtGatG~iG~~l~~~L~~~G~~-~V~~~~R~~~~~~~~~~~~~~~~-~~Dl---~d-~~~~~~~~~-~~D~vv~~a   96 (236)
T 3qvo_A           24 KNVLILGAGGQIARHVINQLADKQTI-KQTLFARQPAKIHKPYPTNSQII-MGDV---LN-HAALKQAMQ-GQDIVYANL   96 (236)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTE-EEEEEESSGGGSCSSCCTTEEEE-ECCT---TC-HHHHHHHHT-TCSEEEEEC
T ss_pred             cEEEEEeCCcHHHHHHHHHHHhCCCc-eEEEEEcChhhhcccccCCcEEE-EecC---CC-HHHHHHHhc-CCCEEEEcC
Confidence            58999997 999999999998899 7 99999998876543322233322 2111   12 223344333 689999888


Q ss_pred             CChH---HHHHHHHHhhcC-CceEEEECc
Q 017457          263 GLTS---VMNDAFNSSREG-WGKTVILGV  287 (371)
Q Consensus       263 g~~~---~~~~~~~~l~~~-~G~~v~~g~  287 (371)
                      +...   ..+.+++.+... .+++|.++.
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~iV~iSS  125 (236)
T 3qvo_A           97 TGEDLDIQANSVIAAMKACDVKRLIFVLS  125 (236)
T ss_dssp             CSTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CCCchhHHHHHHHHHHHHcCCCEEEEEec
Confidence            7643   234566666553 258888876

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=96.50  E-value=0.0079  Score=52.25  Aligned_cols=79  Identities=22%  Similarity=0.268  Sum_probs=50.8

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHHHHH----HhCcc-eEE--cCCCCCCccHHHHHHHhhC-
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIGK----KFGIT-DFI--NPATCGDKTVSQVIKEMTD-  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~-~~~~~~~~~----~lga~-~v~--~~~~~~~~~~~~~i~~~~~-  252 (371)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++ ++++.+.+.    +.+.. ..+  |-.+  .++..+.+.+... 
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   79 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGA-NVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVAN--AEDVTNMVKQTVDV   79 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            4689999998 9999999998888999 8999887 766654432    23432 222  3222  1222222332221 


Q ss_pred             -CCcCEEEECCCC
Q 017457          253 -GGADYCFECIGL  264 (371)
Q Consensus       253 -gg~d~vid~~g~  264 (371)
                       +++|+++++.|.
T Consensus        80 ~g~id~lv~nAg~   92 (246)
T 2uvd_A           80 FGQVDILVNNAGV   92 (246)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence             379999998873

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.50  E-value=0.032  Score=47.66  Aligned_cols=94  Identities=13%  Similarity=0.097  Sum_probs=61.6

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-HHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE-KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~-~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      -.|++|||+|+|.+|...+..+...|+ +|+++++... ..+.+.+.+.-..+. ..+...+       +  .++|+||-
T Consensus        29 L~gk~VLVVGgG~va~~ka~~Ll~~GA-~VtVvap~~~~~l~~l~~~~~i~~i~-~~~~~~d-------L--~~adLVIa   97 (223)
T 3dfz_A           29 LKGRSVLVVGGGTIATRRIKGFLQEGA-AITVVAPTVSAEINEWEAKGQLRVKR-KKVGEED-------L--LNVFFIVV   97 (223)
T ss_dssp             CTTCCEEEECCSHHHHHHHHHHGGGCC-CEEEECSSCCHHHHHHHHTTSCEEEC-SCCCGGG-------S--SSCSEEEE
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCCCCHHHHHHHHcCCcEEEE-CCCCHhH-------h--CCCCEEEE
Confidence            357899999999999999999999999 8888876542 333333333222332 1111111       1  27999999


Q ss_pred             CCCChHHHHHHHHHhhcCCceEEEECcc
Q 017457          261 CIGLTSVMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      +++.+. .+..+...... |..|.....
T Consensus        98 AT~d~~-~N~~I~~~ak~-gi~VNvvD~  123 (223)
T 3dfz_A           98 ATNDQA-VNKFVKQHIKN-DQLVNMASS  123 (223)
T ss_dssp             CCCCTH-HHHHHHHHSCT-TCEEEC---
T ss_pred             CCCCHH-HHHHHHHHHhC-CCEEEEeCC
Confidence            999988 66666666665 888777653

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=96.48  E-value=0.013  Score=52.04  Aligned_cols=35  Identities=26%  Similarity=0.079  Sum_probs=31.3

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN  217 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~  217 (371)
                      -.++++||+|+ +++|.+.++.+...|+ +|++++++
T Consensus         8 l~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~   43 (281)
T 3s55_A            8 FEGKTALITGGARGMGRSHAVALAEAGA-DIAICDRC   43 (281)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCC
Confidence            35789999997 9999999999999999 89999886

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=96.48  E-value=0.01  Score=52.69  Aligned_cols=79  Identities=14%  Similarity=0.122  Sum_probs=52.3

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-H----hCcc-eEE--cCCCCCCccHHHHHHHhhC
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-K----FGIT-DFI--NPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~----lga~-~v~--~~~~~~~~~~~~~i~~~~~  252 (371)
                      -.|+++||+|+ +++|.+.++.+...|+ +|++++++.++.+.+. +    .|.. ..+  |-.+  ..+..+.+.+...
T Consensus        25 l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~  101 (277)
T 4fc7_A           25 LRDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRA--PPAVMAAVDQALK  101 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHH
Confidence            45789999998 9999999998888999 9999999887655432 2    2432 222  3222  1222222332222


Q ss_pred             --CCcCEEEECCC
Q 017457          253 --GGADYCFECIG  263 (371)
Q Consensus       253 --gg~d~vid~~g  263 (371)
                        +++|+++++.|
T Consensus       102 ~~g~id~lv~nAg  114 (277)
T 4fc7_A          102 EFGRIDILINCAA  114 (277)
T ss_dssp             HHSCCCEEEECCC
T ss_pred             HcCCCCEEEECCc
Confidence              37999999987

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.48  E-value=0.0083  Score=51.73  Aligned_cols=37  Identities=24%  Similarity=0.446  Sum_probs=32.3

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK  220 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~  220 (371)
                      +++++||+|+ |++|.+.++.+...|+ +|+++++++++
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~   39 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSAND   39 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecCccc
Confidence            3678999998 9999999999988999 99999987765

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.47  E-value=0.031  Score=49.72  Aligned_cols=87  Identities=20%  Similarity=0.236  Sum_probs=62.1

Q ss_pred             CeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCC
Q 017457          185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL  264 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~  264 (371)
                      .+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|....        .+..+.+.     ..|+||-|++.
T Consensus         2 ~~i~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~--------~~~~~~~~-----~aDvvi~~vp~   67 (287)
T 3pef_A            2 QKFGFIGLGIMGSAMAKNLVKAGC-SVTIWNRSPEKAEELAALGAERA--------ATPCEVVE-----SCPVTFAMLAD   67 (287)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEEC--------SSHHHHHH-----HCSEEEECCSS
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec--------CCHHHHHh-----cCCEEEEEcCC
Confidence            478999999999998888888898 99999999999888887775321        23333332     36899988886


Q ss_pred             hHHHHHHH-------HHhhcCCceEEEEC
Q 017457          265 TSVMNDAF-------NSSREGWGKTVILG  286 (371)
Q Consensus       265 ~~~~~~~~-------~~l~~~~G~~v~~g  286 (371)
                      +......+       ..++++ ..++..+
T Consensus        68 ~~~~~~v~~~~~~l~~~l~~~-~~vi~~s   95 (287)
T 3pef_A           68 PAAAEEVCFGKHGVLEGIGEG-RGYVDMS   95 (287)
T ss_dssp             HHHHHHHHHSTTCHHHHCCTT-CEEEECS
T ss_pred             HHHHHHHHcCcchHhhcCCCC-CEEEeCC
Confidence            54344444       455554 5555554

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=96.47  E-value=0.0078  Score=53.60  Aligned_cols=41  Identities=17%  Similarity=0.160  Sum_probs=35.9

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG  224 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~  224 (371)
                      +++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~   68 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKV   68 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHH
Confidence            4789999998 9999999998888999 999999998876654

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=96.47  E-value=0.0088  Score=52.40  Aligned_cols=78  Identities=13%  Similarity=0.175  Sum_probs=51.0

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcc-eEE--cCCCCCCccHHHHHHHhhC--
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFI--NPATCGDKTVSQVIKEMTD--  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~-~v~--~~~~~~~~~~~~~i~~~~~--  252 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+.    +.+.. ..+  |-.+  .++..+.+.+...  
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   89 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGA-HVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGK--AEDRERLVAMAVNLH   89 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHc
Confidence            5789999998 9999999998888999 9999999887665432    22432 122  2222  1222222222211  


Q ss_pred             CCcCEEEECCC
Q 017457          253 GGADYCFECIG  263 (371)
Q Consensus       253 gg~d~vid~~g  263 (371)
                      +++|+++++.|
T Consensus        90 g~iD~lv~~Ag  100 (260)
T 2zat_A           90 GGVDILVSNAA  100 (260)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37999999877

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=96.47  E-value=0.012  Score=51.10  Aligned_cols=79  Identities=16%  Similarity=0.241  Sum_probs=50.6

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-h----Ccc-eEEcCCCCCCccHHHHHHHhhC--CC
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F----GIT-DFINPATCGDKTVSQVIKEMTD--GG  254 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l----ga~-~v~~~~~~~~~~~~~~i~~~~~--gg  254 (371)
                      ++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+.+ +    +.. .++..+-.+.+++.+.+.+...  ++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGD-RVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGA   80 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            578999998 9999999998888999 89999998877665432 2    322 2222111011222222222221  37


Q ss_pred             cCEEEECCC
Q 017457          255 ADYCFECIG  263 (371)
Q Consensus       255 ~d~vid~~g  263 (371)
                      +|++|++.|
T Consensus        81 id~li~~Ag   89 (250)
T 2cfc_A           81 IDVLVNNAG   89 (250)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999876

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=96.46  E-value=0.0095  Score=51.97  Aligned_cols=96  Identities=17%  Similarity=0.178  Sum_probs=62.4

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhC--CCcCEEEE
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD--GGADYCFE  260 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~--gg~d~vid  260 (371)
                      ++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.     ....++-.+  .++..+.+.+...  +.+|++++
T Consensus        22 ~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~-----~~~~~d~~d--~~~v~~~~~~~~~~~g~iD~li~   93 (251)
T 3orf_A           22 SKNILVLGGSGALGAEVVKFFKSKSW-NTISIDFRENPNAD-----HSFTIKDSG--EEEIKSVIEKINSKSIKVDTFVC   93 (251)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCTTSS-----EEEECSCSS--HHHHHHHHHHHHTTTCCEEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCcccccc-----cceEEEeCC--HHHHHHHHHHHHHHcCCCCEEEE
Confidence            689999998 9999999999888999 89999988765321     111222111  1233333344333  27899999


Q ss_pred             CCCCh-------H-------------------HHHHHHHHhhcCCceEEEECcc
Q 017457          261 CIGLT-------S-------------------VMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       261 ~~g~~-------~-------------------~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      +.|..       .                   ..+.+.+.+..+ |+++.++..
T Consensus        94 ~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS~  146 (251)
T 3orf_A           94 AAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQG-GLFVLTGAS  146 (251)
T ss_dssp             CCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCG
T ss_pred             CCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccC-CEEEEEech
Confidence            88730       0                   134445556666 899999863

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.46  E-value=0.024  Score=53.39  Aligned_cols=97  Identities=18%  Similarity=0.234  Sum_probs=68.6

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  262 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~  262 (371)
                      .+.+|+|+|.|.+|...++.++..|. .|++++.++++.+.+++.|...++- +.    .-.+.+++.--..+|+|+-++
T Consensus         3 ~~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~~g~~vi~G-Da----t~~~~L~~agi~~A~~viv~~   76 (413)
T 3l9w_A            3 HGMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDPDHIETLRKFGMKVFYG-DA----TRMDLLESAGAAKAEVLINAI   76 (413)
T ss_dssp             -CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHHTTCCCEES-CT----TCHHHHHHTTTTTCSEEEECC
T ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHhCCCeEEEc-CC----CCHHHHHhcCCCccCEEEECC
Confidence            34679999999999999999999999 9999999999999999888764442 21    112334443222899999999


Q ss_pred             CChHHH---HHHHHHhhcCCceEEEEC
Q 017457          263 GLTSVM---NDAFNSSREGWGKTVILG  286 (371)
Q Consensus       263 g~~~~~---~~~~~~l~~~~G~~v~~g  286 (371)
                      ++...-   -...+.+.+. -+++.-.
T Consensus        77 ~~~~~n~~i~~~ar~~~p~-~~Iiara  102 (413)
T 3l9w_A           77 DDPQTNLQLTEMVKEHFPH-LQIIARA  102 (413)
T ss_dssp             SSHHHHHHHHHHHHHHCTT-CEEEEEE
T ss_pred             CChHHHHHHHHHHHHhCCC-CeEEEEE
Confidence            976532   2334445554 5565544

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=96.46  E-value=0.0097  Score=52.18  Aligned_cols=80  Identities=13%  Similarity=0.122  Sum_probs=50.7

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhHHHHHHH----hCcc-eEEcCCCCCCccHHHHHHHhhC--C
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGV-DINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--G  253 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~-~~~~~~~~~~~~----lga~-~v~~~~~~~~~~~~~~i~~~~~--g  253 (371)
                      +++++||+|+ |++|.+.+..+...|+ +|+++ .+++++.+.+.+    .+.. .++..+-.+.++..+.+.+...  +
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~-~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGY-NIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFG   81 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5789999998 9999999999989999 88876 888776555432    3432 2222111011222222222221  3


Q ss_pred             CcCEEEECCC
Q 017457          254 GADYCFECIG  263 (371)
Q Consensus       254 g~d~vid~~g  263 (371)
                      ++|+++++.|
T Consensus        82 ~id~lv~nAg   91 (258)
T 3oid_A           82 RLDVFVNNAA   91 (258)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7899999887

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=96.46  E-value=0.0076  Score=52.45  Aligned_cols=81  Identities=17%  Similarity=0.119  Sum_probs=51.2

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcc-eEEcCCCCCCccHHHHHHHhh--CCC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMT--DGG  254 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~-~v~~~~~~~~~~~~~~i~~~~--~gg  254 (371)
                      +++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+.    ..+.. .++..+-.+.+.+.+.+.+..  .++
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   88 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK   88 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            4789999998 9999999998888899 9999999887655432    23432 222211101122222222221  137


Q ss_pred             cCEEEECCCC
Q 017457          255 ADYCFECIGL  264 (371)
Q Consensus       255 ~d~vid~~g~  264 (371)
                      +|++|++.|.
T Consensus        89 ~d~vi~~Ag~   98 (255)
T 1fmc_A           89 VDILVNNAGG   98 (255)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999998873

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=96.46  E-value=0.0077  Score=55.40  Aligned_cols=80  Identities=21%  Similarity=0.230  Sum_probs=52.0

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH-----------HHHHHHhCcce-E--EcCCCCCCccHHHH
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-----------FEIGKKFGITD-F--INPATCGDKTVSQV  246 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~-----------~~~~~~lga~~-v--~~~~~~~~~~~~~~  246 (371)
                      -.|+++||+|+ +++|.+.+..+...|+ +|+++++++++           .+.+++.|... .  .|-.+  .++..+.
T Consensus        43 l~gk~vlVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d--~~~v~~~  119 (346)
T 3kvo_A           43 LAGCTVFITGASRGIGKAIALKAAKDGA-NIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRD--EQQISAA  119 (346)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHH
T ss_pred             CCCCEEEEeCCChHHHHHHHHHHHHCCC-EEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHH
Confidence            35899999998 9999999988888999 89999887653           22334445332 2  23222  1222223


Q ss_pred             HHHhhC--CCcCEEEECCCC
Q 017457          247 IKEMTD--GGADYCFECIGL  264 (371)
Q Consensus       247 i~~~~~--gg~d~vid~~g~  264 (371)
                      +.+...  +++|+++++.|.
T Consensus       120 ~~~~~~~~g~iDilVnnAG~  139 (346)
T 3kvo_A          120 VEKAIKKFGGIDILVNNASA  139 (346)
T ss_dssp             HHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHcCCCCEEEECCCC
Confidence            333222  379999999884

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=96.45  E-value=0.013  Score=52.52  Aligned_cols=80  Identities=13%  Similarity=0.109  Sum_probs=51.5

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-h----Ccc-eEEcCCCCCCccHHHHHHHhh--CC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F----GIT-DFINPATCGDKTVSQVIKEMT--DG  253 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l----ga~-~v~~~~~~~~~~~~~~i~~~~--~g  253 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+.+ +    +.. .++..+-.+.+++.+.+.+..  -+
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  103 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG  103 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence            4689999998 9999999998888999 89999998877654322 2    432 222211101122222222221  23


Q ss_pred             CcCEEEECCC
Q 017457          254 GADYCFECIG  263 (371)
Q Consensus       254 g~d~vid~~g  263 (371)
                      .+|++|++.|
T Consensus       104 ~id~li~~Ag  113 (302)
T 1w6u_A          104 HPNIVINNAA  113 (302)
T ss_dssp             SCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7899999887

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=96.45  E-value=0.0047  Score=53.70  Aligned_cols=75  Identities=7%  Similarity=-0.066  Sum_probs=50.5

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-c--CChhHHHHHHH-h-CcceEEcCCCCCCccHHHHHHHhhCCCcCE
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGV-D--INPEKFEIGKK-F-GITDFINPATCGDKTVSQVIKEMTDGGADY  257 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~-~--~~~~~~~~~~~-l-ga~~v~~~~~~~~~~~~~~i~~~~~gg~d~  257 (371)
                      ++++||+|+ |++|.+.++.+...|+ +|+++ +  +++++.+.+.+ + +.+ +.+.+.  ...+.+.+.+.. +++|+
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~r~~~~~~~~~~~~~~~~-~~~~~~--v~~~~~~~~~~~-g~iD~   75 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGY-TVVCHDASFADAAERQRFESENPGTI-ALAEQK--PERLVDATLQHG-EAIDT   75 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHSTTEE-ECCCCC--GGGHHHHHGGGS-SCEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCcCCHHHHHHHHHHhCCCc-ccCHHH--HHHHHHHHHHHc-CCCCE
Confidence            478999998 9999999999888999 99999 6  88877665533 3 332 333222  123333333222 37999


Q ss_pred             EEECCC
Q 017457          258 CFECIG  263 (371)
Q Consensus       258 vid~~g  263 (371)
                      ++++.|
T Consensus        76 lv~~Ag   81 (244)
T 1zmo_A           76 IVSNDY   81 (244)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999887

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=96.45  E-value=0.0099  Score=52.60  Aligned_cols=80  Identities=21%  Similarity=0.250  Sum_probs=49.6

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcc-eEEcCCCCCCccHHHHHHHhhC--CC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GG  254 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~-~v~~~~~~~~~~~~~~i~~~~~--gg  254 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|++++++.++.+.+.    ..+.. .++..+-.+..++.+.+.+...  +.
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  111 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGA-DVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGT  111 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTC-EEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            4789999998 9999998888888899 8999988776544332    23432 2222111011222222322221  36


Q ss_pred             cCEEEECCC
Q 017457          255 ADYCFECIG  263 (371)
Q Consensus       255 ~d~vid~~g  263 (371)
                      +|++|++.|
T Consensus       112 id~li~~Ag  120 (279)
T 3ctm_A          112 IDVFVANAG  120 (279)
T ss_dssp             CSEEEECGG
T ss_pred             CCEEEECCc
Confidence            999999876

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.45  E-value=0.0069  Score=53.79  Aligned_cols=78  Identities=21%  Similarity=0.267  Sum_probs=51.2

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-h---Cc---c-eEE--cCCCCCCccHHHHHHHhh
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F---GI---T-DFI--NPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l---ga---~-~v~--~~~~~~~~~~~~~i~~~~  251 (371)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ +   +.   . .++  |-.+  .++..+.+.+..
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~   81 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTT--EDGQDQIINSTL   81 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTS--HHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCC--HHHHHHHHHHHH
Confidence            5789999998 9999999998888999 99999999877665432 2   22   1 222  3222  122222222222


Q ss_pred             C--CCcCEEEECCC
Q 017457          252 D--GGADYCFECIG  263 (371)
Q Consensus       252 ~--gg~d~vid~~g  263 (371)
                      .  +++|+++++.|
T Consensus        82 ~~~g~iD~lv~nAg   95 (280)
T 1xkq_A           82 KQFGKIDVLVNNAG   95 (280)
T ss_dssp             HHHSCCCEEEECCC
T ss_pred             HhcCCCCEEEECCC
Confidence            1  37999999877

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=96.44  E-value=0.014  Score=51.70  Aligned_cols=82  Identities=23%  Similarity=0.268  Sum_probs=50.9

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC------------hhHHHHH----HHhCcce-EEcCCCCCCccH
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN------------PEKFEIG----KKFGITD-FINPATCGDKTV  243 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~------------~~~~~~~----~~lga~~-v~~~~~~~~~~~  243 (371)
                      -.|+++||+|+ +++|.+.+..+...|+ +|++++++            .++.+..    +..+... .+.-+-.+.++.
T Consensus        11 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   89 (278)
T 3sx2_A           11 LTGKVAFITGAARGQGRAHAVRLAADGA-DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESL   89 (278)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence            35789999998 9999999998888999 89999876            4444332    2334332 222111011222


Q ss_pred             HHHHHHhhC--CCcCEEEECCCC
Q 017457          244 SQVIKEMTD--GGADYCFECIGL  264 (371)
Q Consensus       244 ~~~i~~~~~--gg~d~vid~~g~  264 (371)
                      .+.+.+...  +++|+++++.|.
T Consensus        90 ~~~~~~~~~~~g~id~lv~nAg~  112 (278)
T 3sx2_A           90 SAALQAGLDELGRLDIVVANAGI  112 (278)
T ss_dssp             HHHHHHHHHHHCCCCEEEECCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCC
Confidence            222332222  379999998874

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=96.43  E-value=0.0079  Score=55.28  Aligned_cols=91  Identities=15%  Similarity=0.147  Sum_probs=66.5

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      -.|++|.|+|.|.+|...++.++..|. +|++.+++....+.+.+.|+..+        .++.+.+.     ..|+|+.+
T Consensus       162 l~gktvGIIG~G~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~--------~~l~ell~-----~aDvV~l~  227 (351)
T 3jtm_A          162 LEGKTIGTVGAGRIGKLLLQRLKPFGC-NLLYHDRLQMAPELEKETGAKFV--------EDLNEMLP-----KCDVIVIN  227 (351)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHGGGCC-EEEEECSSCCCHHHHHHHCCEEC--------SCHHHHGG-----GCSEEEEC
T ss_pred             ccCCEEeEEEeCHHHHHHHHHHHHCCC-EEEEeCCCccCHHHHHhCCCeEc--------CCHHHHHh-----cCCEEEEC
Confidence            358899999999999999999999999 89999988766677777776432        12322221     57888887


Q ss_pred             CCCh-H----HHHHHHHHhhcCCceEEEECc
Q 017457          262 IGLT-S----VMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       262 ~g~~-~----~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      ++.. .    .-...+..|+++ ..+|..+.
T Consensus       228 ~Plt~~t~~li~~~~l~~mk~g-ailIN~aR  257 (351)
T 3jtm_A          228 MPLTEKTRGMFNKELIGKLKKG-VLIVNNAR  257 (351)
T ss_dssp             SCCCTTTTTCBSHHHHHHSCTT-EEEEECSC
T ss_pred             CCCCHHHHHhhcHHHHhcCCCC-CEEEECcC
Confidence            7732 1    125667788886 88887764

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=96.43  E-value=0.001  Score=56.35  Aligned_cols=100  Identities=15%  Similarity=0.046  Sum_probs=68.5

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc--eEEcCCCCCCccHHHHHH
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIK  248 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~--~v~~~~~~~~~~~~~~i~  248 (371)
                      +.....++++++||-+|+|. |..+..+++. +. +|++++.+++..+.+++    .|..  .++..+      ..+.. 
T Consensus        69 ~~~~l~~~~~~~vLdiG~G~-G~~~~~la~~-~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d------~~~~~-  138 (210)
T 3lbf_A           69 MTELLELTPQSRVLEIGTGS-GYQTAILAHL-VQ-HVCSVERIKGLQWQARRRLKNLDLHNVSTRHGD------GWQGW-  138 (210)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHH-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC------GGGCC-
T ss_pred             HHHhcCCCCCCEEEEEcCCC-CHHHHHHHHh-CC-EEEEEecCHHHHHHHHHHHHHcCCCceEEEECC------cccCC-
Confidence            34556788999999999974 8888888887 66 99999999988877765    3432  222211      11100 


Q ss_pred             HhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEEC
Q 017457          249 EMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       249 ~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                       ...+.||+|+....-......+.+.|+++ |+++..-
T Consensus       139 -~~~~~~D~i~~~~~~~~~~~~~~~~L~pg-G~lv~~~  174 (210)
T 3lbf_A          139 -QARAPFDAIIVTAAPPEIPTALMTQLDEG-GILVLPV  174 (210)
T ss_dssp             -GGGCCEEEEEESSBCSSCCTHHHHTEEEE-EEEEEEE
T ss_pred             -ccCCCccEEEEccchhhhhHHHHHhcccC-cEEEEEE
Confidence             01237999997655444356788999998 9877653

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=96.43  E-value=0.014  Score=52.35  Aligned_cols=35  Identities=26%  Similarity=0.234  Sum_probs=30.9

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN  217 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~  217 (371)
                      -.|+++||+|+ +++|.+.++.+...|+ +|++++++
T Consensus        26 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~   61 (299)
T 3t7c_A           26 VEGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVC   61 (299)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence            35789999998 9999999998888999 89998876

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=96.42  E-value=0.013  Score=49.93  Aligned_cols=95  Identities=18%  Similarity=0.251  Sum_probs=61.9

Q ss_pred             CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCC
Q 017457          185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG  263 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g  263 (371)
                      .+|||+|+ |.+|...++.+...|. +|+++++++++.+.+. .+. .++..+-   .+ .+.+.+... ++|+||++.+
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-~~~-~~~~~Dl---~d-~~~~~~~~~-~~d~vi~~a~   76 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGF-EVTAVVRHPEKIKIEN-EHL-KVKKADV---SS-LDEVCEVCK-GADAVISAFN   76 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTC-EEEEECSCGGGCCCCC-TTE-EEECCCT---TC-HHHHHHHHT-TCSEEEECCC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC-EEEEEEcCcccchhcc-Cce-EEEEecC---CC-HHHHHHHhc-CCCEEEEeCc
Confidence            58999998 9999999999999998 9999999887653321 122 2222221   12 233444433 6999999987


Q ss_pred             Ch-----------HHHHHHHHHhhcCC-ceEEEECc
Q 017457          264 LT-----------SVMNDAFNSSREGW-GKTVILGV  287 (371)
Q Consensus       264 ~~-----------~~~~~~~~~l~~~~-G~~v~~g~  287 (371)
                      ..           .....+++.+.... .+++.++.
T Consensus        77 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss  112 (227)
T 3dhn_A           77 PGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGG  112 (227)
T ss_dssp             C------CCSHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence            54           12445566666541 37888875

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=96.42  E-value=0.011  Score=51.75  Aligned_cols=80  Identities=19%  Similarity=0.106  Sum_probs=51.3

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcc-eEEcCCCCCCcc-HHHHHHH---hhC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKT-VSQVIKE---MTD  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~-~v~~~~~~~~~~-~~~~i~~---~~~  252 (371)
                      +++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+.    +.+.. .++..+- .+.+ ..+.+.+   ..+
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~~~   90 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDA-SLRPEREKLMQTVSSMFG   90 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-TSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCC-CCHHHHHHHHHHHHHHhC
Confidence            4689999998 9999999998888999 9999999887665432    22432 2222111 1122 2222222   222


Q ss_pred             CCcCEEEECCCC
Q 017457          253 GGADYCFECIGL  264 (371)
Q Consensus       253 gg~d~vid~~g~  264 (371)
                      +++|++|++.|.
T Consensus        91 ~~id~li~~Ag~  102 (266)
T 1xq1_A           91 GKLDILINNLGA  102 (266)
T ss_dssp             TCCSEEEEECCC
T ss_pred             CCCcEEEECCCC
Confidence            579999998773

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=96.42  E-value=0.0091  Score=52.47  Aligned_cols=82  Identities=20%  Similarity=0.287  Sum_probs=52.0

Q ss_pred             CCCCeEEEEcC-C-hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-h---C-cc-eEEcCCCCCCccHHHHHHHhhC-
Q 017457          182 EVGSTVAIFGL-G-AVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F---G-IT-DFINPATCGDKTVSQVIKEMTD-  252 (371)
Q Consensus       182 ~~g~~VLI~G~-g-~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l---g-a~-~v~~~~~~~~~~~~~~i~~~~~-  252 (371)
                      -+++++||+|+ | ++|.+.+..+...|+ +|++++++.++.+.+.+ +   + .. .++.-+-.+.++..+.+.+... 
T Consensus        20 l~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   98 (266)
T 3o38_A           20 LKGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEK   98 (266)
T ss_dssp             TTTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence            35789999998 7 799999988888899 89999999887655432 2   2 11 2222111011222222222221 


Q ss_pred             -CCcCEEEECCCC
Q 017457          253 -GGADYCFECIGL  264 (371)
Q Consensus       253 -gg~d~vid~~g~  264 (371)
                       +.+|++|++.|.
T Consensus        99 ~g~id~li~~Ag~  111 (266)
T 3o38_A           99 AGRLDVLVNNAGL  111 (266)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             hCCCcEEEECCCc
Confidence             379999999883

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=96.41  E-value=0.013  Score=51.96  Aligned_cols=81  Identities=21%  Similarity=0.279  Sum_probs=51.6

Q ss_pred             CCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-------------ChhHHHHHH----HhCcce-E--EcCCCCC
Q 017457          181 VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-------------NPEKFEIGK----KFGITD-F--INPATCG  239 (371)
Q Consensus       181 ~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~-------------~~~~~~~~~----~lga~~-v--~~~~~~~  239 (371)
                      --.|+++||+|+ +++|.+.++.+...|+ +|+++++             ++++.+.+.    +.|... .  .|-.+  
T Consensus        12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--   88 (280)
T 3pgx_A           12 SLQGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRD--   88 (280)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC--
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCC--
Confidence            346899999998 9999999998889999 8999887             455554432    234322 2  23222  


Q ss_pred             CccHHHHHHHhhC--CCcCEEEECCCC
Q 017457          240 DKTVSQVIKEMTD--GGADYCFECIGL  264 (371)
Q Consensus       240 ~~~~~~~i~~~~~--gg~d~vid~~g~  264 (371)
                      .++..+.+.+...  +++|+++++.|.
T Consensus        89 ~~~v~~~~~~~~~~~g~id~lvnnAg~  115 (280)
T 3pgx_A           89 DAALRELVADGMEQFGRLDVVVANAGV  115 (280)
T ss_dssp             HHHHHHHHHHHHHHHCCCCEEEECCCC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence            1222222222221  379999998874

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=96.40  E-value=0.009  Score=52.07  Aligned_cols=76  Identities=13%  Similarity=0.192  Sum_probs=50.3

Q ss_pred             CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhCcc-eEE--cCCCCCCccHHHHHHHhhC--CCcCE
Q 017457          185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGIT-DFI--NPATCGDKTVSQVIKEMTD--GGADY  257 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga~-~v~--~~~~~~~~~~~~~i~~~~~--gg~d~  257 (371)
                      +++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+. +++.. ..+  |-.+  .++..+.+.+...  +++|+
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~iD~   77 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRN--RAAIEEMLASLPAEWCNIDI   77 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTC--HHHHHHHHHTSCTTTCCCCE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCC--HHHHHHHHHHHHHhCCCCCE
Confidence            46899998 9999999998888999 9999999988776553 34422 222  3222  1222233333222  27999


Q ss_pred             EEECCC
Q 017457          258 CFECIG  263 (371)
Q Consensus       258 vid~~g  263 (371)
                      ++++.|
T Consensus        78 lvnnAg   83 (248)
T 3asu_A           78 LVNNAG   83 (248)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999877

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=96.40  E-value=0.016  Score=51.38  Aligned_cols=80  Identities=16%  Similarity=0.214  Sum_probs=51.3

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHHHH----HHhCcc-eEE--cCCCCCCccHHHHHHHhhC
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIG----KKFGIT-DFI--NPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~-~~~~~~~~----~~lga~-~v~--~~~~~~~~~~~~~i~~~~~  252 (371)
                      ..++++||+|+ |++|.+.+..+...|+ +|+++++ ++++.+.+    ++.|.. .++  |-.+  .++..+.+.+...
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~  103 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIGDAEGVAPVIAELSGLGARVIFLRADLAD--LSSHQATVDAVVA  103 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTS--GGGHHHHHHHHHH
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHH
Confidence            45789999998 9999999999889999 8888874 66554433    223432 222  3222  2333333333322


Q ss_pred             --CCcCEEEECCCC
Q 017457          253 --GGADYCFECIGL  264 (371)
Q Consensus       253 --gg~d~vid~~g~  264 (371)
                        +++|+++++.|.
T Consensus       104 ~~g~iD~lvnnAg~  117 (280)
T 4da9_A          104 EFGRIDCLVNNAGI  117 (280)
T ss_dssp             HHSCCCEEEEECC-
T ss_pred             HcCCCCEEEECCCc
Confidence              379999998875

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=96.38  E-value=0.0093  Score=52.36  Aligned_cols=81  Identities=12%  Similarity=0.126  Sum_probs=50.6

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHH-cCCCeEEEEcCChhHHHHHH----HhCcc-eEEcCCCCCCccHHHHHHHhhC--C
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARL-NRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--G  253 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~-~g~~~Vi~~~~~~~~~~~~~----~lga~-~v~~~~~~~~~~~~~~i~~~~~--g  253 (371)
                      +++++||+|+ |++|.+.+..+.. .|+ +|++++++.++.+.+.    ..+.. .++..+-.+..++.+.+.+...  +
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG   81 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            5789999998 9999998888877 899 9999999877655432    22322 2222111011222222222221  3


Q ss_pred             CcCEEEECCCC
Q 017457          254 GADYCFECIGL  264 (371)
Q Consensus       254 g~d~vid~~g~  264 (371)
                      ++|++|++.|.
T Consensus        82 ~id~li~~Ag~   92 (276)
T 1wma_A           82 GLDVLVNNAGI   92 (276)
T ss_dssp             SEEEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999998873

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=96.38  E-value=0.0096  Score=53.05  Aligned_cols=79  Identities=23%  Similarity=0.284  Sum_probs=50.8

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH-----------HHHHHHhCcce-EE--cCCCCCCccHHHHH
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-----------FEIGKKFGITD-FI--NPATCGDKTVSQVI  247 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~-----------~~~~~~lga~~-v~--~~~~~~~~~~~~~i  247 (371)
                      +++++||+|+ +++|.+.++.+...|+ +|++++++.++           .+.+++.+... .+  |-.+  .++..+.+
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~   84 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGA-NVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRD--GDAVAAAV   84 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTS--HHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHH
Confidence            5789999998 9999999988888999 99999987652           22233445332 22  3222  12222222


Q ss_pred             HHhhC--CCcCEEEECCCC
Q 017457          248 KEMTD--GGADYCFECIGL  264 (371)
Q Consensus       248 ~~~~~--gg~d~vid~~g~  264 (371)
                      .+...  +++|+++++.|.
T Consensus        85 ~~~~~~~g~id~lvnnAg~  103 (285)
T 3sc4_A           85 AKTVEQFGGIDICVNNASA  103 (285)
T ss_dssp             HHHHHHHSCCSEEEECCCC
T ss_pred             HHHHHHcCCCCEEEECCCC
Confidence            32222  379999998874

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=96.38  E-value=0.013  Score=52.49  Aligned_cols=41  Identities=12%  Similarity=0.157  Sum_probs=35.3

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG  224 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~  224 (371)
                      +++++||+|+ |++|.+.+..+...|+ +|++++++.++.+.+
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~   58 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSA   58 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH
Confidence            4689999998 9999999998888999 899999988766543

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=96.37  E-value=0.0055  Score=52.40  Aligned_cols=87  Identities=11%  Similarity=0.157  Sum_probs=56.7

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      .++++||+|+ +++|.+.++.+...|+ +|++++++.+             .|-.+  .+...+.+.++  +++|+++++
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~-------------~D~~~--~~~v~~~~~~~--g~id~lv~n   66 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHT-IVHVASRQTG-------------LDISD--EKSVYHYFETI--GAFDHLIVT   66 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTE-EEEEESGGGT-------------CCTTC--HHHHHHHHHHH--CSEEEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEecCCcc-------------cCCCC--HHHHHHHHHHh--CCCCEEEEC
Confidence            4788999998 9999999988888899 9999987654             12222  01222222222  478888888


Q ss_pred             CCCh--------------------------HHHHHHHHHhhcCCceEEEECcc
Q 017457          262 IGLT--------------------------SVMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       262 ~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      .|..                          ...+.+.+.++++ |+++.++..
T Consensus        67 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-g~iv~~sS~  118 (223)
T 3uce_A           67 AGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQG-GSITLTSGM  118 (223)
T ss_dssp             CCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEE-EEEEEECCG
T ss_pred             CCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCC-eEEEEecch
Confidence            7732                          0123344455566 899998863

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=96.37  E-value=0.014  Score=51.88  Aligned_cols=35  Identities=29%  Similarity=0.251  Sum_probs=30.9

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN  217 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~  217 (371)
                      -.|+++||+|+ +++|.+.++.+...|+ +|++++++
T Consensus         9 l~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~   44 (286)
T 3uve_A            9 VEGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDIC   44 (286)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEecc
Confidence            35889999998 9999999998888999 89998776

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=96.37  E-value=0.016  Score=51.40  Aligned_cols=35  Identities=26%  Similarity=0.115  Sum_probs=31.1

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN  217 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~  217 (371)
                      -.|+++||+|+ +++|.+.+..+...|+ +|++++++
T Consensus         8 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~   43 (287)
T 3pxx_A            8 VQDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDIC   43 (287)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEccc
Confidence            35789999998 9999999999889999 89999876

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=96.37  E-value=0.01  Score=52.44  Aligned_cols=79  Identities=14%  Similarity=0.120  Sum_probs=49.8

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHHHH----HHhCcc-eEE--cCCCCCCccHHHHHHHhhC-
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIG----KKFGIT-DFI--NPATCGDKTVSQVIKEMTD-  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~-~~~~~~~~----~~lga~-~v~--~~~~~~~~~~~~~i~~~~~-  252 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|+++++ +.++.+.+    ++.+.. ..+  |-.+  .++..+.+.+... 
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~v~~~~~~~~~~  103 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGA-KVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQ--ESEVEALFAAVIER  103 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHHHH
Confidence            5789999998 9999999998888999 8888876 55554443    223432 222  2222  1222222222221 


Q ss_pred             -CCcCEEEECCCC
Q 017457          253 -GGADYCFECIGL  264 (371)
Q Consensus       253 -gg~d~vid~~g~  264 (371)
                       +++|+++++.|.
T Consensus       104 ~g~id~lv~nAg~  116 (269)
T 4dmm_A          104 WGRLDVLVNNAGI  116 (269)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence             379999998874

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=96.36  E-value=0.019  Score=52.01  Aligned_cols=89  Identities=18%  Similarity=0.255  Sum_probs=65.3

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      -.|++|.|+|.|.+|...++.++..|. +|++.+++.++. .+.+.|+.. .        ++.+.+.     ..|+|+.+
T Consensus       140 l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~g~~~-~--------~l~ell~-----~aDvVvl~  203 (313)
T 2ekl_A          140 LAGKTIGIVGFGRIGTKVGIIANAMGM-KVLAYDILDIRE-KAEKINAKA-V--------SLEELLK-----NSDVISLH  203 (313)
T ss_dssp             CTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSCCHH-HHHHTTCEE-C--------CHHHHHH-----HCSEEEEC
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCcchh-HHHhcCcee-c--------CHHHHHh-----hCCEEEEe
Confidence            467899999999999999999999999 999999887764 456677642 1        2222222     47999988


Q ss_pred             CCChH----HH-HHHHHHhhcCCceEEEECc
Q 017457          262 IGLTS----VM-NDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       262 ~g~~~----~~-~~~~~~l~~~~G~~v~~g~  287 (371)
                      ++...    .+ ...+..++++ +.++.++.
T Consensus       204 ~P~~~~t~~li~~~~l~~mk~g-a~lIn~ar  233 (313)
T 2ekl_A          204 VTVSKDAKPIIDYPQFELMKDN-VIIVNTSR  233 (313)
T ss_dssp             CCCCTTSCCSBCHHHHHHSCTT-EEEEESSC
T ss_pred             ccCChHHHHhhCHHHHhcCCCC-CEEEECCC
Confidence            77432    12 4567788887 88888865

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=96.36  E-value=0.01  Score=52.35  Aligned_cols=81  Identities=20%  Similarity=0.249  Sum_probs=50.6

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHHHH----HHhCcc-eEEcCCCCCCccHHHHHHHhhC--C
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--G  253 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~-~~~~~~~~----~~lga~-~v~~~~~~~~~~~~~~i~~~~~--g  253 (371)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++ +++..+.+    ++.+.. .++..+-.+.++..+.+.+...  +
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g  106 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGL-KVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDG  106 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            5789999998 9999999888888999 8999888 44443333    233432 2232222111223333333222  3


Q ss_pred             CcCEEEECCCC
Q 017457          254 GADYCFECIGL  264 (371)
Q Consensus       254 g~d~vid~~g~  264 (371)
                      ++|+++++.|.
T Consensus       107 ~id~li~nAg~  117 (271)
T 4iin_A          107 GLSYLVNNAGV  117 (271)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999998874

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=96.35  E-value=0.012  Score=51.54  Aligned_cols=78  Identities=17%  Similarity=0.237  Sum_probs=49.5

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH--HHHH-HH---hCcc-eEE--cCCCCCCccHHHHHHHhhC-
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK--FEIG-KK---FGIT-DFI--NPATCGDKTVSQVIKEMTD-  252 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~--~~~~-~~---lga~-~v~--~~~~~~~~~~~~~i~~~~~-  252 (371)
                      ++++||+|+ |++|.+.++.+...|+ +|+++++++++  .+.+ ++   .+.. ..+  |-.+  .++..+.+.+... 
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~   78 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGF-DIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTD--KANFDSAIDEAAEK   78 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHH
Confidence            678999998 9999999888888899 89999988766  4433 22   2332 222  2222  1222222222221 


Q ss_pred             -CCcCEEEECCCC
Q 017457          253 -GGADYCFECIGL  264 (371)
Q Consensus       253 -gg~d~vid~~g~  264 (371)
                       +++|+++++.|.
T Consensus        79 ~g~iD~lv~nAg~   91 (258)
T 3a28_C           79 LGGFDVLVNNAGI   91 (258)
T ss_dssp             HTCCCEEEECCCC
T ss_pred             hCCCCEEEECCCC
Confidence             379999998873

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=96.35  E-value=0.026  Score=49.92  Aligned_cols=95  Identities=12%  Similarity=-0.030  Sum_probs=61.0

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      -++++++|+|+|++|.+.+..+...|+ +|+++.++.++.+.+ ++++...-++..+  ..+    +.+   +++|++++
T Consensus       117 l~~k~vlViGaGg~g~a~a~~L~~~G~-~V~v~~R~~~~~~~la~~~~~~~~~~~~~--~~~----~~~---~~~DivVn  186 (271)
T 1nyt_A          117 RPGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALS--MDE----LEG---HEFDLIIN  186 (271)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECC--SGG----GTT---CCCSEEEE
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHhhccCCeeEec--HHH----hcc---CCCCEEEE
Confidence            368899999999999999999999997 999999998886554 4454310011111  011    111   47999999


Q ss_pred             CCCChHHHH---HHHHHhhcCCceEEEECc
Q 017457          261 CIGLTSVMN---DAFNSSREGWGKTVILGV  287 (371)
Q Consensus       261 ~~g~~~~~~---~~~~~l~~~~G~~v~~g~  287 (371)
                      +++....-.   .....++++ ..++++..
T Consensus       187 ~t~~~~~~~~~~i~~~~l~~~-~~v~D~~y  215 (271)
T 1nyt_A          187 ATSSGISGDIPAIPSSLIHPG-IYCYDMFY  215 (271)
T ss_dssp             CCSCGGGTCCCCCCGGGCCTT-CEEEESCC
T ss_pred             CCCCCCCCCCCCCCHHHcCCC-CEEEEecc
Confidence            999755200   011234454 56666654

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=96.35  E-value=0.011  Score=52.72  Aligned_cols=79  Identities=14%  Similarity=0.223  Sum_probs=51.0

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eEE--cCCCCCCccHHHHHHHhh--C
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFI--NPATCGDKTVSQVIKEMT--D  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~--~~~~~~~~~~~~~i~~~~--~  252 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+.+    .+.. .++  |-.+  .+.+.+.+.+..  -
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~~~  119 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSK--KEEISEVINKILTEH  119 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTC--HHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCC--HHHHHHHHHHHHHhc
Confidence            4689999998 9999999988888899 89998888776554322    2432 222  2222  122222232221  2


Q ss_pred             CCcCEEEECCCC
Q 017457          253 GGADYCFECIGL  264 (371)
Q Consensus       253 gg~d~vid~~g~  264 (371)
                      +++|++|++.|.
T Consensus       120 ~~id~li~~Ag~  131 (285)
T 2c07_A          120 KNVDILVNNAGI  131 (285)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999998873

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=96.35  E-value=0.0079  Score=52.40  Aligned_cols=81  Identities=23%  Similarity=0.239  Sum_probs=50.5

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC-hhHHHHHH----HhCcc-eEEcCCCCCCccHHHHHHHhhC--C
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN-PEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--G  253 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~-~~~~~~~~----~lga~-~v~~~~~~~~~~~~~~i~~~~~--g  253 (371)
                      +++++||+|+ |++|.+.+..+...|+ +|++++++ +++.+.+.    ..+.. .++..+-.+.+++.+.+.+...  +
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGA-KVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFG   84 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4689999998 9999999988888999 89999887 65554432    22422 2222111011222222332221  3


Q ss_pred             CcCEEEECCCC
Q 017457          254 GADYCFECIGL  264 (371)
Q Consensus       254 g~d~vid~~g~  264 (371)
                      ++|++|++.|.
T Consensus        85 ~id~vi~~Ag~   95 (258)
T 3afn_B           85 GIDVLINNAGG   95 (258)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999998874

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.35  E-value=0.0078  Score=52.05  Aligned_cols=80  Identities=16%  Similarity=0.242  Sum_probs=51.7

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcC--CCeEEEEcCChhHHHHHHHh-Ccc-eEEcCCCCCCccHHHHHHHh---hCC-
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNR--ASKIIGVDINPEKFEIGKKF-GIT-DFINPATCGDKTVSQVIKEM---TDG-  253 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g--~~~Vi~~~~~~~~~~~~~~l-ga~-~v~~~~~~~~~~~~~~i~~~---~~g-  253 (371)
                      +++++||+|+ |++|.+.++.+...|  + +|++++++.++.+.++++ +.. .++..+-.+.....+.+.+.   .+. 
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   80 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIR-HIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCC-EEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCc-EEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence            3678999998 999999999888889  8 999999998877766654 222 22221110111222222222   221 


Q ss_pred             CcCEEEECCC
Q 017457          254 GADYCFECIG  263 (371)
Q Consensus       254 g~d~vid~~g  263 (371)
                      ++|++|++.|
T Consensus        81 ~id~li~~Ag   90 (250)
T 1yo6_A           81 GLSLLINNAG   90 (250)
T ss_dssp             CCCEEEECCC
T ss_pred             CCcEEEECCc
Confidence            6999999876

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=96.34  E-value=0.0091  Score=57.02  Aligned_cols=91  Identities=22%  Similarity=0.303  Sum_probs=68.7

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      .-.|++|.|+|.|.+|...++.++.+|+ +|++.+++..+...+...|+. +        .++.    ++.. ..|+|+.
T Consensus       254 ~l~GktVgIIG~G~IG~~vA~~l~~~G~-~Viv~d~~~~~~~~a~~~g~~-~--------~~l~----ell~-~aDiVi~  318 (479)
T 1v8b_A          254 LISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGFN-V--------VTLD----EIVD-KGDFFIT  318 (479)
T ss_dssp             CCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTCE-E--------CCHH----HHTT-TCSEEEE
T ss_pred             ccCCCEEEEEeeCHHHHHHHHHHHhCcC-EEEEEeCChhhHHHHHHcCCE-e--------cCHH----HHHh-cCCEEEE
Confidence            4578999999999999999999999999 999999998776455556652 2        1222    2222 6899998


Q ss_pred             CCCChHHH-HHHHHHhhcCCceEEEECc
Q 017457          261 CIGLTSVM-NDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       261 ~~g~~~~~-~~~~~~l~~~~G~~v~~g~  287 (371)
                      +++....+ ...+..|+++ ..++.+|.
T Consensus       319 ~~~t~~lI~~~~l~~MK~g-ailiNvgr  345 (479)
T 1v8b_A          319 CTGNVDVIKLEHLLKMKNN-AVVGNIGH  345 (479)
T ss_dssp             CCSSSSSBCHHHHTTCCTT-CEEEECSS
T ss_pred             CCChhhhcCHHHHhhcCCC-cEEEEeCC
Confidence            87655533 4677788997 89998885

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=96.33  E-value=0.012  Score=52.07  Aligned_cols=79  Identities=20%  Similarity=0.226  Sum_probs=50.1

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH-------HH----HHHHhCcce-EE--cCCCCCCccHHHHH
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-------FE----IGKKFGITD-FI--NPATCGDKTVSQVI  247 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~-------~~----~~~~lga~~-v~--~~~~~~~~~~~~~i  247 (371)
                      +++++||+|+ +++|.+.+..+...|+ +|++++++.++       .+    .++..+... .+  |-.+  .++..+.+
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~   81 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGA-NVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIRE--EDQVRAAV   81 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTC--HHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCC--HHHHHHHH
Confidence            5789999998 9999999988888999 89999887643       22    222334321 22  3222  12222222


Q ss_pred             HHhhC--CCcCEEEECCCC
Q 017457          248 KEMTD--GGADYCFECIGL  264 (371)
Q Consensus       248 ~~~~~--gg~d~vid~~g~  264 (371)
                      .+...  +++|+++++.|.
T Consensus        82 ~~~~~~~g~iD~lvnnAG~  100 (274)
T 3e03_A           82 AATVDTFGGIDILVNNASA  100 (274)
T ss_dssp             HHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHcCCCCEEEECCCc
Confidence            32222  379999999884

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=96.32  E-value=0.058  Score=49.16  Aligned_cols=76  Identities=20%  Similarity=0.218  Sum_probs=50.1

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh----HHHHHHHh------CcceEEcCCCCCCccHHHHHHHhh
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE----KFEIGKKF------GITDFINPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~----~~~~~~~l------ga~~v~~~~~~~~~~~~~~i~~~~  251 (371)
                      .+++|||+|+ |.+|...+..+...|. +|++++++..    ..+.+...      .--.++..+-   .+ .+.+.++.
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl---~d-~~~~~~~~   98 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDI---RD-LTTCEQVM   98 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCT---TC-HHHHHHHT
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccC---CC-HHHHHHHh
Confidence            4689999998 9999999999988998 9999988543    33333332      2112232222   12 23344444


Q ss_pred             CCCcCEEEECCCC
Q 017457          252 DGGADYCFECIGL  264 (371)
Q Consensus       252 ~gg~d~vid~~g~  264 (371)
                      . ++|+||++.+.
T Consensus        99 ~-~~d~Vih~A~~  110 (351)
T 3ruf_A           99 K-GVDHVLHQAAL  110 (351)
T ss_dssp             T-TCSEEEECCCC
T ss_pred             c-CCCEEEECCcc
Confidence            4 79999999874

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=96.32  E-value=0.021  Score=54.70  Aligned_cols=95  Identities=16%  Similarity=0.104  Sum_probs=61.6

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHH-hCcce-EEcCCCCCCccHHHHHHHhhCCCcCEEE
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKK-FGITD-FINPATCGDKTVSQVIKEMTDGGADYCF  259 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~-lga~~-v~~~~~~~~~~~~~~i~~~~~gg~d~vi  259 (371)
                      ++++|+|+|+|++|.+.+..+... |. +|++++++.++.+.+.+ .+... .+|..     +. +.+.+... ++|+|+
T Consensus        22 ~~k~VlIiGAGgiG~aia~~L~~~~g~-~V~v~~R~~~ka~~la~~~~~~~~~~D~~-----d~-~~l~~~l~-~~DvVI   93 (467)
T 2axq_A           22 MGKNVLLLGSGFVAQPVIDTLAANDDI-NVTVACRTLANAQALAKPSGSKAISLDVT-----DD-SALDKVLA-DNDVVI   93 (467)
T ss_dssp             -CEEEEEECCSTTHHHHHHHHHTSTTE-EEEEEESSHHHHHHHHGGGTCEEEECCTT-----CH-HHHHHHHH-TSSEEE
T ss_pred             CCCEEEEECChHHHHHHHHHHHhCCCC-eEEEEECCHHHHHHHHHhcCCcEEEEecC-----CH-HHHHHHHc-CCCEEE
Confidence            457899999999999988888776 67 89999999888766543 23322 22322     22 12322222 699999


Q ss_pred             ECCCChHHHHHHHHHhhcCCceEEEEC
Q 017457          260 ECIGLTSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       260 d~~g~~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      ++++..........++.++ -.+++..
T Consensus        94 n~tp~~~~~~v~~a~l~~g-~~vvd~~  119 (467)
T 2axq_A           94 SLIPYTFHPNVVKSAIRTK-TDVVTSS  119 (467)
T ss_dssp             ECSCGGGHHHHHHHHHHHT-CEEEECS
T ss_pred             ECCchhhhHHHHHHHHhcC-CEEEEee
Confidence            9999654233445566665 5666553

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=96.32  E-value=0.016  Score=51.31  Aligned_cols=34  Identities=35%  Similarity=0.295  Sum_probs=30.4

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI  216 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~  216 (371)
                      -.++++||+|+ +++|.+.++.+...|+ +|+++++
T Consensus         9 l~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r   43 (277)
T 3tsc_A            9 LEGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDI   43 (277)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             cCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEec
Confidence            35789999998 9999999998889999 8999987

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=96.32  E-value=0.0087  Score=55.37  Aligned_cols=91  Identities=19%  Similarity=0.239  Sum_probs=64.8

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCe-EEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASK-IIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~-Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      -.|++|.|+|.|.+|...++.++..|. + |++.+++..+.+.+.++|+..+        .++.+.+.     ..|+|+.
T Consensus       162 l~g~tvgIIG~G~IG~~vA~~l~~~G~-~~V~~~d~~~~~~~~~~~~g~~~~--------~~l~ell~-----~aDvV~l  227 (364)
T 2j6i_A          162 IEGKTIATIGAGRIGYRVLERLVPFNP-KELLYYDYQALPKDAEEKVGARRV--------ENIEELVA-----QADIVTV  227 (364)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHGGGCC-SEEEEECSSCCCHHHHHHTTEEEC--------SSHHHHHH-----TCSEEEE
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHhCCC-cEEEEECCCccchhHHHhcCcEec--------CCHHHHHh-----cCCEEEE
Confidence            368899999999999999999999999 6 9999988766666667775421        12322222     5788888


Q ss_pred             CCCChH----HH-HHHHHHhhcCCceEEEECc
Q 017457          261 CIGLTS----VM-NDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       261 ~~g~~~----~~-~~~~~~l~~~~G~~v~~g~  287 (371)
                      +++...    .+ ...+..|+++ +.++.++.
T Consensus       228 ~~P~t~~t~~li~~~~l~~mk~g-a~lIn~ar  258 (364)
T 2j6i_A          228 NAPLHAGTKGLINKELLSKFKKG-AWLVNTAR  258 (364)
T ss_dssp             CCCCSTTTTTCBCHHHHTTSCTT-EEEEECSC
T ss_pred             CCCCChHHHHHhCHHHHhhCCCC-CEEEECCC
Confidence            776531    12 3456777776 77777764

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=96.30  E-value=0.0084  Score=52.63  Aligned_cols=80  Identities=13%  Similarity=0.159  Sum_probs=51.0

Q ss_pred             CCCCCeEEEEcC-ChHHHHHHHHHHHcC---CCeEEEEcCChhHHHHHHHh---Ccc-eEE--cCCCCCCccHHHHHHHh
Q 017457          181 VEVGSTVAIFGL-GAVGLAVAEGARLNR---ASKIIGVDINPEKFEIGKKF---GIT-DFI--NPATCGDKTVSQVIKEM  250 (371)
Q Consensus       181 ~~~g~~VLI~G~-g~~G~~ai~la~~~g---~~~Vi~~~~~~~~~~~~~~l---ga~-~v~--~~~~~~~~~~~~~i~~~  250 (371)
                      ..+++++||+|+ |++|.+.+..+...|   + +|++++++.++.+.++++   +.. .++  |-.+  .+.+.+.+.+.
T Consensus        18 ~~~~k~vlITGasggIG~~la~~L~~~G~~~~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~   94 (267)
T 1sny_A           18 GSHMNSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRN--FDAYDKLVADI   94 (267)
T ss_dssp             --CCSEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTC--GGGHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHhcCCCCc-EEEEEecChhhhHHHHHhhccCCceEEEEecCCC--hHHHHHHHHHH
Confidence            345689999998 999999999888889   7 999999887654444332   322 222  3222  13333333332


Q ss_pred             ---hCC-CcCEEEECCC
Q 017457          251 ---TDG-GADYCFECIG  263 (371)
Q Consensus       251 ---~~g-g~d~vid~~g  263 (371)
                         .+. ++|++|++.|
T Consensus        95 ~~~~g~~~id~li~~Ag  111 (267)
T 1sny_A           95 EGVTKDQGLNVLFNNAG  111 (267)
T ss_dssp             HHHHGGGCCSEEEECCC
T ss_pred             HHhcCCCCccEEEECCC
Confidence               222 5999999887

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=96.30  E-value=0.0098  Score=51.25  Aligned_cols=103  Identities=22%  Similarity=0.230  Sum_probs=68.8

Q ss_pred             cCCCCCCeEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHHHHHHhhC
Q 017457          179 AGVEVGSTVAIFGLGAVGLAVAEGARLN--RASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       179 ~~~~~g~~VLI~G~g~~G~~ai~la~~~--g~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~~~  252 (371)
                      ....++++||-+|+| .|..++.+++.+  +. +|++++.+++..+.+++    .|...-+....   .+..+.+.++..
T Consensus        68 ~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~-~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~---~d~~~~l~~l~~  142 (232)
T 3cbg_A           68 ISLTGAKQVLEIGVF-RGYSALAMALQLPPDG-QIIACDQDPNATAIAKKYWQKAGVAEKISLRL---GPALATLEQLTQ  142 (232)
T ss_dssp             HHHHTCCEEEEECCT-TSHHHHHHHTTSCTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEE---SCHHHHHHHHHT
T ss_pred             HHhcCCCEEEEecCC-CCHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHHHHHHHHh
Confidence            445678899999987 588888999876  45 99999999988777754    34321111111   344444444432


Q ss_pred             ----CCcCEEE-ECCCC--hHHHHHHHHHhhcCCceEEEECc
Q 017457          253 ----GGADYCF-ECIGL--TSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       253 ----gg~d~vi-d~~g~--~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                          +.||+|| |....  ...++.+.+.|+++ |.++.-..
T Consensus       143 ~~~~~~fD~V~~d~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~  183 (232)
T 3cbg_A          143 GKPLPEFDLIFIDADKRNYPRYYEIGLNLLRRG-GLMVIDNV  183 (232)
T ss_dssp             SSSCCCEEEEEECSCGGGHHHHHHHHHHTEEEE-EEEEEECT
T ss_pred             cCCCCCcCEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEeCC
Confidence                4799998 43322  23478888999998 99887543

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=96.29  E-value=0.016  Score=50.41  Aligned_cols=80  Identities=14%  Similarity=0.210  Sum_probs=49.7

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh--hHHHHHHHh--Ccc-eEE--cCCCCCC-ccHHHHHHHhhC-
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP--EKFEIGKKF--GIT-DFI--NPATCGD-KTVSQVIKEMTD-  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~--~~~~~~~~l--ga~-~v~--~~~~~~~-~~~~~~i~~~~~-  252 (371)
                      +++++||+|+ |++|.+.+..+...|+++|+++++++  +..+.+.+.  +.. .++  |-.+  . ++..+.+.+... 
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   81 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTV--PVAESKKLLKKIFDQ   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTS--CHHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCC--ChHHHHHHHHHHHHh
Confidence            4789999998 99999999988889994388888765  334444433  222 222  2222  1 122222332221 


Q ss_pred             -CCcCEEEECCCC
Q 017457          253 -GGADYCFECIGL  264 (371)
Q Consensus       253 -gg~d~vid~~g~  264 (371)
                       +++|+++++.|.
T Consensus        82 ~g~id~lv~~Ag~   94 (254)
T 1sby_A           82 LKTVDILINGAGI   94 (254)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCcc
Confidence             379999999873

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.28  E-value=0.042  Score=49.04  Aligned_cols=86  Identities=15%  Similarity=0.217  Sum_probs=61.5

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCCh
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT  265 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~~  265 (371)
                      +|.|+|+|.+|...+..+...|. +|++.++++++.+.+.+.|... .       .+..+.+.     .+|+||.|++.+
T Consensus         7 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~-~-------~~~~~~~~-----~~D~vi~~v~~~   72 (299)
T 1vpd_A            7 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAET-A-------STAKAIAE-----QCDVIITMLPNS   72 (299)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE-C-------SSHHHHHH-----HCSEEEECCSSH
T ss_pred             eEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCee-c-------CCHHHHHh-----CCCEEEEECCCH
Confidence            79999999999998888888898 8999999999888887766431 1       23333332     479999999865


Q ss_pred             HHHHHHH-------HHhhcCCceEEEEC
Q 017457          266 SVMNDAF-------NSSREGWGKTVILG  286 (371)
Q Consensus       266 ~~~~~~~-------~~l~~~~G~~v~~g  286 (371)
                      ...+..+       ..++++ ..++.++
T Consensus        73 ~~~~~~~~~~~~l~~~l~~~-~~vv~~s   99 (299)
T 1vpd_A           73 PHVKEVALGENGIIEGAKPG-TVLIDMS   99 (299)
T ss_dssp             HHHHHHHHSTTCHHHHCCTT-CEEEECS
T ss_pred             HHHHHHHhCcchHhhcCCCC-CEEEECC
Confidence            5455444       455665 5666654

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=96.28  E-value=0.016  Score=50.62  Aligned_cols=102  Identities=15%  Similarity=0.129  Sum_probs=70.6

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcc----eEEcCCCCCCccHHHHHHHh
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT----DFINPATCGDKTVSQVIKEM  250 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~----~v~~~~~~~~~~~~~~i~~~  250 (371)
                      +.....+.++.+||-+|+| .|..+..+++..+. +|++++.+++..+.+++....    .++..+-   .++     ..
T Consensus        47 ~~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~---~~~-----~~  116 (266)
T 3ujc_A           47 ILSDIELNENSKVLDIGSG-LGGGCMYINEKYGA-HTHGIDICSNIVNMANERVSGNNKIIFEANDI---LTK-----EF  116 (266)
T ss_dssp             HTTTCCCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHTCCSCTTEEEEECCT---TTC-----CC
T ss_pred             HHHhcCCCCCCEEEEECCC-CCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhhcCCCeEEEECcc---ccC-----CC
Confidence            3344567889999999987 48888888887788 999999999999988875422    2222111   111     11


Q ss_pred             hCCCcCEEEECCCC--------hHHHHHHHHHhhcCCceEEEECc
Q 017457          251 TDGGADYCFECIGL--------TSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       251 ~~gg~d~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      ..+.+|+|+....-        ...++.+.+.|+++ |.++....
T Consensus       117 ~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~  160 (266)
T 3ujc_A          117 PENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPT-GTLLITDY  160 (266)
T ss_dssp             CTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCC-CEEEEEEe
Confidence            22379999964321        12468888999998 99887754

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=96.28  E-value=0.014  Score=53.06  Aligned_cols=35  Identities=29%  Similarity=0.347  Sum_probs=31.1

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN  217 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~  217 (371)
                      -.|+++||+|+ +++|.+.+..+...|+ +|++++++
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~G~-~Vv~~~r~   60 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIG   60 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCC
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCc
Confidence            46789999998 9999999988888999 99999876

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=96.28  E-value=0.024  Score=50.32  Aligned_cols=98  Identities=11%  Similarity=0.159  Sum_probs=68.3

Q ss_pred             HHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh----Ccc---eEEcCCCCCCccHHHHHH
Q 017457          176 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GIT---DFINPATCGDKTVSQVIK  248 (371)
Q Consensus       176 ~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l----ga~---~v~~~~~~~~~~~~~~i~  248 (371)
                      ....++.++.+||-+|+|. |..+..+++..|. +|++++.+++..+.+++.    |..   .++..      ++    .
T Consensus        57 ~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~------d~----~  124 (287)
T 1kpg_A           57 LGKLGLQPGMTLLDVGCGW-GATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLA------GW----E  124 (287)
T ss_dssp             HTTTTCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEES------CG----G
T ss_pred             HHHcCCCCcCEEEEECCcc-cHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEEC------Ch----h
Confidence            3445678999999999876 7788888877798 999999999888877653    321   12211      11    1


Q ss_pred             HhhCCCcCEEEEC-----CC--C-hHHHHHHHHHhhcCCceEEEECc
Q 017457          249 EMTDGGADYCFEC-----IG--L-TSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       249 ~~~~gg~d~vid~-----~g--~-~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      ++. +.+|+|+..     .+  . ...++.+.+.|+|+ |.++....
T Consensus       125 ~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  169 (287)
T 1kpg_A          125 QFD-EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPAD-GVMLLHTI  169 (287)
T ss_dssp             GCC-CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTT-CEEEEEEE
T ss_pred             hCC-CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCC-CEEEEEEe
Confidence            122 479999854     22  1 23478889999998 99887653

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.27  E-value=0.0084  Score=53.01  Aligned_cols=95  Identities=16%  Similarity=0.183  Sum_probs=64.0

Q ss_pred             ccccchhhhHHHHHHHcCCCCCCeEEEEcCC-hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCc
Q 017457          163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLG-AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK  241 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g-~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~  241 (371)
                      .+||+...+...+.+..---.|++++|+|.| .+|..++.++...|+ +|+++.+..                      .
T Consensus       140 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~hs~t----------------------~  196 (285)
T 3l07_A          140 LESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKA-TVTTCHRFT----------------------T  196 (285)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC----------------------S
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc----------------------h
Confidence            3454444444433333233589999999985 589999999999999 888876431                      2


Q ss_pred             cHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECcc
Q 017457          242 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       242 ~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      ++.+.++     .+|+||.++|.+..+.  -+.++++ ..++++|..
T Consensus       197 ~L~~~~~-----~ADIVI~Avg~p~~I~--~~~vk~G-avVIDvgi~  235 (285)
T 3l07_A          197 DLKSHTT-----KADILIVAVGKPNFIT--ADMVKEG-AVVIDVGIN  235 (285)
T ss_dssp             SHHHHHT-----TCSEEEECCCCTTCBC--GGGSCTT-CEEEECCCE
T ss_pred             hHHHhcc-----cCCEEEECCCCCCCCC--HHHcCCC-cEEEEeccc
Confidence            3333222     6899999999875332  2456886 888999864

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=96.27  E-value=0.017  Score=48.23  Aligned_cols=96  Identities=14%  Similarity=0.137  Sum_probs=60.2

Q ss_pred             CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCC
Q 017457          185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG  263 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g  263 (371)
                      .+|||+|+ |.+|...++.+...|. +|+++++++++.+.....+.. ++..+-   .+ .+.+.+... ++|+||++.+
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~-~~~~D~---~~-~~~~~~~~~-~~d~vi~~a~   76 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPAH-VVVGDV---LQ-AADVDKTVA-GQDAVIVLLG   76 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCSE-EEESCT---TS-HHHHHHHHT-TCSEEEECCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeChhhcccccCCceE-EEEecC---CC-HHHHHHHHc-CCCEEEECcc
Confidence            68999998 9999999999988898 999999887764322111222 222221   12 223444333 6899999987


Q ss_pred             ChH----------HHHHHHHHhhcC-CceEEEECc
Q 017457          264 LTS----------VMNDAFNSSREG-WGKTVILGV  287 (371)
Q Consensus       264 ~~~----------~~~~~~~~l~~~-~G~~v~~g~  287 (371)
                      ...          ....+++.+... .++++.++.
T Consensus        77 ~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss  111 (206)
T 1hdo_A           77 TRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS  111 (206)
T ss_dssp             CTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             CCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEee
Confidence            432          234444444432 257888875

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=96.27  E-value=0.016  Score=53.26  Aligned_cols=88  Identities=17%  Similarity=0.171  Sum_probs=63.1

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  262 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~  262 (371)
                      .|++|.|+|.|.+|...++.++..|. +|++.+++. +.+.+.+.|+..+        .++.+.+.     ..|+|+.++
T Consensus       159 ~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~~~~~g~~~~--------~~l~ell~-----~aDiV~l~~  223 (352)
T 3gg9_A          159 KGQTLGIFGYGKIGQLVAGYGRAFGM-NVLVWGREN-SKERARADGFAVA--------ESKDALFE-----QSDVLSVHL  223 (352)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSHH-HHHHHHHTTCEEC--------SSHHHHHH-----HCSEEEECC
T ss_pred             CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEECCCC-CHHHHHhcCceEe--------CCHHHHHh-----hCCEEEEec
Confidence            57899999999999999999999999 999999775 4455566776422        13333332     478888777


Q ss_pred             CChH-----HHHHHHHHhhcCCceEEEEC
Q 017457          263 GLTS-----VMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       263 g~~~-----~~~~~~~~l~~~~G~~v~~g  286 (371)
                      +...     .-...+..|+++ ..+|.++
T Consensus       224 Plt~~t~~li~~~~l~~mk~g-ailIN~a  251 (352)
T 3gg9_A          224 RLNDETRSIITVADLTRMKPT-ALFVNTS  251 (352)
T ss_dssp             CCSTTTTTCBCHHHHTTSCTT-CEEEECS
T ss_pred             cCcHHHHHhhCHHHHhhCCCC-cEEEECC
Confidence            6321     123567778886 8888887

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=96.26  E-value=0.019  Score=50.05  Aligned_cols=102  Identities=21%  Similarity=0.251  Sum_probs=66.8

Q ss_pred             cCCCCCCeEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHHHHHHhh-
Q 017457          179 AGVEVGSTVAIFGLGAVGLAVAEGARLN--RASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMT-  251 (371)
Q Consensus       179 ~~~~~g~~VLI~G~g~~G~~ai~la~~~--g~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~~-  251 (371)
                      ....++++||-+|+|. |..++.+|+.+  +. +|++++.+++..+.+++    .|...-+....   .+..+.+..+. 
T Consensus        75 ~~~~~~~~VLeiG~G~-G~~~~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~---gda~~~l~~l~~  149 (247)
T 1sui_A           75 LKLINAKNTMEIGVYT-GYSLLATALAIPEDG-KILAMDINKENYELGLPVIKKAGVDHKIDFRE---GPALPVLDEMIK  149 (247)
T ss_dssp             HHHTTCCEEEEECCGG-GHHHHHHHHHSCTTC-EEEEEESCCHHHHHHHHHHHHTTCGGGEEEEE---SCHHHHHHHHHH
T ss_pred             HHhhCcCEEEEeCCCc-CHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEE---CCHHHHHHHHHh
Confidence            4456778999999865 77888888886  56 99999999988777654    34321111111   23333343332 


Q ss_pred             ----CCCcCEEEECCCC---hHHHHHHHHHhhcCCceEEEEC
Q 017457          252 ----DGGADYCFECIGL---TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       252 ----~gg~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                          .+.||+||-....   ...++.+.+.|+++ |.++.-.
T Consensus       150 ~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~d~  190 (247)
T 1sui_A          150 DEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVG-GVIGYDN  190 (247)
T ss_dssp             SGGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTT-CCEEEEC
T ss_pred             ccCCCCCEEEEEEcCchHHHHHHHHHHHHhCCCC-eEEEEec
Confidence                3479999843222   33477889999998 9987654

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.24  E-value=0.038  Score=50.09  Aligned_cols=89  Identities=15%  Similarity=0.202  Sum_probs=62.9

Q ss_pred             CCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCC
Q 017457          184 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG  263 (371)
Q Consensus       184 g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g  263 (371)
                      ..+|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|+...        .+..+.+.     ..|+||-+++
T Consensus        31 ~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~--------~~~~e~~~-----~aDvVi~~vp   96 (320)
T 4dll_A           31 ARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRTPARAASLAALGATIH--------EQARAAAR-----DADIVVSMLE   96 (320)
T ss_dssp             CSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCEEE--------SSHHHHHT-----TCSEEEECCS
T ss_pred             CCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHCCCEee--------CCHHHHHh-----cCCEEEEECC
Confidence            4589999999999998888888899 99999999999988877775322        12322221     5788888888


Q ss_pred             ChHHHHHHH------HHhhcCCceEEEECc
Q 017457          264 LTSVMNDAF------NSSREGWGKTVILGV  287 (371)
Q Consensus       264 ~~~~~~~~~------~~l~~~~G~~v~~g~  287 (371)
                      .+......+      ..++++ ..++.++.
T Consensus        97 ~~~~~~~v~~~~~~~~~l~~~-~~vi~~st  125 (320)
T 4dll_A           97 NGAVVQDVLFAQGVAAAMKPG-SLFLDMAS  125 (320)
T ss_dssp             SHHHHHHHHTTTCHHHHCCTT-CEEEECSC
T ss_pred             CHHHHHHHHcchhHHhhCCCC-CEEEecCC
Confidence            754344443      345554 56666653

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=96.21  E-value=0.02  Score=51.11  Aligned_cols=41  Identities=12%  Similarity=0.046  Sum_probs=35.2

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhHHHHH
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVD-INPEKFEIG  224 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~-~~~~~~~~~  224 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|++++ +++++.+.+
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~r~~~~~~~~   50 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANAL   50 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHH
Confidence            4789999998 9999999999888999 899998 888766544

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=96.21  E-value=0.02  Score=49.38  Aligned_cols=101  Identities=17%  Similarity=0.199  Sum_probs=68.0

Q ss_pred             HHcCCCCCCeEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHHhC-----cceEEcCCCCCCccHHHHHHHh
Q 017457          177 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKKFG-----ITDFINPATCGDKTVSQVIKEM  250 (371)
Q Consensus       177 ~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~lg-----a~~v~~~~~~~~~~~~~~i~~~  250 (371)
                      ....++||++||=+|+|. |..+..+|+..|. .+|++++.+++..+.+++.-     ...+.....    +. ... ..
T Consensus        71 ~~l~ikpG~~VldlG~G~-G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~----~p-~~~-~~  143 (233)
T 4df3_A           71 IELPVKEGDRILYLGIAS-GTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDAR----FP-EKY-RH  143 (233)
T ss_dssp             SCCCCCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTT----CG-GGG-TT
T ss_pred             hhcCCCCCCEEEEecCcC-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEecc----Cc-ccc-cc
Confidence            346799999999999977 8888899998774 48999999999887776532     223332211    11 000 11


Q ss_pred             hCCCcCEEEECCCCh----HHHHHHHHHhhcCCceEEEE
Q 017457          251 TDGGADYCFECIGLT----SVMNDAFNSSREGWGKTVIL  285 (371)
Q Consensus       251 ~~gg~d~vid~~g~~----~~~~~~~~~l~~~~G~~v~~  285 (371)
                      ....+|+|+.....+    ..+..+.+.|+++ |+++..
T Consensus       144 ~~~~vDvVf~d~~~~~~~~~~l~~~~r~LKpG-G~lvI~  181 (233)
T 4df3_A          144 LVEGVDGLYADVAQPEQAAIVVRNARFFLRDG-GYMLMA  181 (233)
T ss_dssp             TCCCEEEEEECCCCTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ccceEEEEEEeccCChhHHHHHHHHHHhccCC-CEEEEE
Confidence            122689988654433    2467778899998 998765

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.19  E-value=0.013  Score=52.21  Aligned_cols=96  Identities=17%  Similarity=0.199  Sum_probs=63.7

Q ss_pred             cccchhhhHHHHHHHcCCCCCCeEEEEcCC-hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457          164 LSCGVSTGVGAAWKVAGVEVGSTVAIFGLG-AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT  242 (371)
Q Consensus       164 ~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g-~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~  242 (371)
                      +||+...+...+.+..---.|++++|+|.| .+|..++.++...|+ +|+++.+....++                    
T Consensus       145 ~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~~~~T~~l~--------------------  203 (300)
T 4a26_A          145 TPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENA-TVTIVHSGTSTED--------------------  203 (300)
T ss_dssp             CCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTSCHHH--------------------
T ss_pred             CCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCCCCch--------------------
Confidence            444444444433333334589999999985 589999999999999 8988875322111                    


Q ss_pred             HHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECcc
Q 017457          243 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       243 ~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      +.+.++     .+|+||.++|.+..+..  +.++++ ..++++|..
T Consensus       204 l~~~~~-----~ADIVI~Avg~p~~I~~--~~vk~G-avVIDvgi~  241 (300)
T 4a26_A          204 MIDYLR-----TADIVIAAMGQPGYVKG--EWIKEG-AAVVDVGTT  241 (300)
T ss_dssp             HHHHHH-----TCSEEEECSCCTTCBCG--GGSCTT-CEEEECCCE
T ss_pred             hhhhhc-----cCCEEEECCCCCCCCcH--HhcCCC-cEEEEEecc
Confidence            002222     58999999998753322  346886 889999864

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=96.19  E-value=0.022  Score=50.78  Aligned_cols=79  Identities=22%  Similarity=0.189  Sum_probs=50.8

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCC--CeEEEEcCChhHHHHHHH-h-----Ccc-eEE--cCCCCCCccHHHHHHHh
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRA--SKIIGVDINPEKFEIGKK-F-----GIT-DFI--NPATCGDKTVSQVIKEM  250 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~--~~Vi~~~~~~~~~~~~~~-l-----ga~-~v~--~~~~~~~~~~~~~i~~~  250 (371)
                      .++++||+|+ +++|.+.+..+...|+  .+|++++++.++.+.+.+ +     +.. .++  |-.+  .++..+.+.+.
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~  109 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQ--AEKIKPFIENL  109 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTC--GGGHHHHHHTS
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCC--HHHHHHHHHHH
Confidence            4789999998 9999987766655554  289999999887766533 2     322 222  3222  23344444433


Q ss_pred             hC--CCcCEEEECCC
Q 017457          251 TD--GGADYCFECIG  263 (371)
Q Consensus       251 ~~--gg~d~vid~~g  263 (371)
                      ..  +++|+++++.|
T Consensus       110 ~~~~g~iD~lVnnAG  124 (287)
T 3rku_A          110 PQEFKDIDILVNNAG  124 (287)
T ss_dssp             CGGGCSCCEEEECCC
T ss_pred             HHhcCCCCEEEECCC
Confidence            32  27999999887

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=96.18  E-value=0.02  Score=52.18  Aligned_cols=41  Identities=12%  Similarity=0.046  Sum_probs=35.4

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhHHHHH
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVD-INPEKFEIG  224 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~-~~~~~~~~~  224 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|++++ +++++.+.+
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~-~Vv~~~~r~~~~~~~~   87 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANAL   87 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHH
Confidence            5789999998 9999999999989999 899998 888776554

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=96.18  E-value=0.015  Score=51.32  Aligned_cols=82  Identities=16%  Similarity=0.066  Sum_probs=50.3

Q ss_pred             CCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhHHHHHH----HhCcc-eEEcCCCCCCccHHHHHHHhhC-
Q 017457          181 VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGV-DINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD-  252 (371)
Q Consensus       181 ~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~-~~~~~~~~~~~----~lga~-~v~~~~~~~~~~~~~~i~~~~~-  252 (371)
                      ..+++++||+|+ |++|.+.+..+...|+ +|+++ .++.++.+.+.    +.+.. .++..+-.+.++..+.+.+... 
T Consensus        23 m~~~k~vlITGas~gIG~a~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  101 (272)
T 4e3z_A           23 MSDTPVVLVTGGSRGIGAAVCRLAARQGW-RVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQ  101 (272)
T ss_dssp             -CCSCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            356789999998 9999999999989999 78766 77776655443    23332 2222211011222222222221 


Q ss_pred             -CCcCEEEECCC
Q 017457          253 -GGADYCFECIG  263 (371)
Q Consensus       253 -gg~d~vid~~g  263 (371)
                       +++|++|++.|
T Consensus       102 ~g~id~li~nAg  113 (272)
T 4e3z_A          102 FGRLDGLVNNAG  113 (272)
T ss_dssp             HSCCCEEEECCC
T ss_pred             CCCCCEEEECCC
Confidence             37999999877

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=96.18  E-value=0.0081  Score=53.09  Aligned_cols=78  Identities=19%  Similarity=0.277  Sum_probs=49.5

Q ss_pred             CCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceE-EcCCCCCCccHHHHHHHhhC--CCc
Q 017457          180 GVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMTD--GGA  255 (371)
Q Consensus       180 ~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~--gg~  255 (371)
                      .-.++++|||+|+ +++|.+.+..+...|+ +|+++++++++...    ....+ .|-.+  .++..+.+.+...  +++
T Consensus        10 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~----~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~i   82 (269)
T 3vtz_A           10 EEFTDKVAIVTGGSSGIGLAVVDALVRYGA-KVVSVSLDEKSDVN----VSDHFKIDVTN--EEEVKEAVEKTTKKYGRI   82 (269)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCC--CTT----SSEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhccC----ceeEEEecCCC--HHHHHHHHHHHHHHcCCC
Confidence            3567899999998 9999999998888999 89999887654311    12211 23222  1222222332222  379


Q ss_pred             CEEEECCCC
Q 017457          256 DYCFECIGL  264 (371)
Q Consensus       256 d~vid~~g~  264 (371)
                      |+++++.|.
T Consensus        83 D~lv~nAg~   91 (269)
T 3vtz_A           83 DILVNNAGI   91 (269)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999998874

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=96.18  E-value=0.011  Score=52.23  Aligned_cols=77  Identities=14%  Similarity=0.109  Sum_probs=50.5

Q ss_pred             CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCc---ceEE--cCCCCCCccHHHHHHHhhC--CCc
Q 017457          185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGI---TDFI--NPATCGDKTVSQVIKEMTD--GGA  255 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga---~~v~--~~~~~~~~~~~~~i~~~~~--gg~  255 (371)
                      +++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ +..   ...+  |-.+  .++..+.+.+...  +.+
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g~i   98 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGW-SLVLTGRREERLQALAGELSAKTRVLPLTLDVRD--RAAMSAAVDNLPEEFATL   98 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTC--HHHHHHHHHTCCGGGSSC
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHhCCC
Confidence            78999998 9999999998888999 99999999887765433 321   1222  2222  1222222332222  268


Q ss_pred             CEEEECCCC
Q 017457          256 DYCFECIGL  264 (371)
Q Consensus       256 d~vid~~g~  264 (371)
                      |+++++.|.
T Consensus        99 D~lvnnAG~  107 (272)
T 2nwq_A           99 RGLINNAGL  107 (272)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998763

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=96.17  E-value=0.02  Score=50.00  Aligned_cols=94  Identities=19%  Similarity=0.358  Sum_probs=65.0

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eEEcCCCCCCccHHHHHHHhhCCCc
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTDGGA  255 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~~~~~~~~~~~~~~i~~~~~gg~  255 (371)
                      +.++++||-+|+|. |.+++.+++ .|. +|++++.++...+.+++    .+.. .++.      .++.+.   +..+.+
T Consensus       118 ~~~~~~VLDiGcG~-G~l~~~la~-~g~-~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~------~d~~~~---~~~~~f  185 (254)
T 2nxc_A          118 LRPGDKVLDLGTGS-GVLAIAAEK-LGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLE------GSLEAA---LPFGPF  185 (254)
T ss_dssp             CCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEE------SCHHHH---GGGCCE
T ss_pred             cCCCCEEEEecCCC-cHHHHHHHH-hCC-eEEEEECCHHHHHHHHHHHHHcCCcEEEEE------CChhhc---CcCCCC
Confidence            67899999999876 777777666 588 99999999988777765    3432 2221      233332   223489


Q ss_pred             CEEEECCCC---hHHHHHHHHHhhcCCceEEEECc
Q 017457          256 DYCFECIGL---TSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       256 d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      |+|+.....   ...+..+.+.|+++ |+++..+.
T Consensus       186 D~Vv~n~~~~~~~~~l~~~~~~Lkpg-G~lils~~  219 (254)
T 2nxc_A          186 DLLVANLYAELHAALAPRYREALVPG-GRALLTGI  219 (254)
T ss_dssp             EEEEEECCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CEEEECCcHHHHHHHHHHHHHHcCCC-CEEEEEee
Confidence            999964422   23467788899998 99988764

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.17  E-value=0.0099  Score=52.54  Aligned_cols=94  Identities=20%  Similarity=0.175  Sum_probs=63.4

Q ss_pred             cccchhhhHHHHHHHcCCCCCCeEEEEcCC-hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457          164 LSCGVSTGVGAAWKVAGVEVGSTVAIFGLG-AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT  242 (371)
Q Consensus       164 ~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g-~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~  242 (371)
                      +||+...+...+.+..---.|++++|+|.| .+|..++.++...|+ +|+++.+..                      .+
T Consensus       140 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gA-tVtv~h~~t----------------------~~  196 (285)
T 3p2o_A          140 LPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGA-TVSVCHIKT----------------------KD  196 (285)
T ss_dssp             CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC----------------------SC
T ss_pred             CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCc----------------------hh
Confidence            444444444333322234589999999985 589999999999999 888886432                      23


Q ss_pred             HHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECcc
Q 017457          243 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       243 ~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      +.+.++     .+|++|.++|.+..+.  -+.++++ ..++++|..
T Consensus       197 L~~~~~-----~ADIVI~Avg~p~~I~--~~~vk~G-avVIDVgi~  234 (285)
T 3p2o_A          197 LSLYTR-----QADLIIVAAGCVNLLR--SDMVKEG-VIVVDVGIN  234 (285)
T ss_dssp             HHHHHT-----TCSEEEECSSCTTCBC--GGGSCTT-EEEEECCCE
T ss_pred             HHHHhh-----cCCEEEECCCCCCcCC--HHHcCCC-eEEEEeccC
Confidence            333222     5899999999875332  2456886 888999864

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=96.17  E-value=0.07  Score=42.44  Aligned_cols=96  Identities=8%  Similarity=-0.014  Sum_probs=60.6

Q ss_pred             CCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC-hhHHHHHHH---hCcceEEcCCCCCCccHHHHHHHhhCCCcCEEE
Q 017457          184 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN-PEKFEIGKK---FGITDFINPATCGDKTVSQVIKEMTDGGADYCF  259 (371)
Q Consensus       184 g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~-~~~~~~~~~---lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vi  259 (371)
                      .++++|+|+|.+|...++.+...|. +|++++++ +++.+.+.+   .|.. ++..+.   .+ .+.+.+..-.++|+|+
T Consensus         3 ~~~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~~~~~-~i~gd~---~~-~~~l~~a~i~~ad~vi   76 (153)
T 1id1_A            3 KDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNAD-VIPGDS---ND-SSVLKKAGIDRCRAIL   76 (153)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTCE-EEESCT---TS-HHHHHHHTTTTCSEEE
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhcCCCe-EEEcCC---CC-HHHHHHcChhhCCEEE
Confidence            4679999999999999999999999 89999986 465555543   2443 332222   12 2334443223899999


Q ss_pred             ECCCChHH---HHHHHHHhhcCCceEEEEC
Q 017457          260 ECIGLTSV---MNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       260 d~~g~~~~---~~~~~~~l~~~~G~~v~~g  286 (371)
                      -++++...   .....+.+.+. .+++...
T Consensus        77 ~~~~~d~~n~~~~~~a~~~~~~-~~ii~~~  105 (153)
T 1id1_A           77 ALSDNDADNAFVVLSAKDMSSD-VKTVLAV  105 (153)
T ss_dssp             ECSSCHHHHHHHHHHHHHHTSS-SCEEEEC
T ss_pred             EecCChHHHHHHHHHHHHHCCC-CEEEEEE
Confidence            99987551   22333444443 5665543

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=96.17  E-value=0.024  Score=47.12  Aligned_cols=100  Identities=19%  Similarity=0.217  Sum_probs=67.3

Q ss_pred             cCCCCCCeEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHH----hCc-c--eEEcCCCCCCccHHHHHHHh
Q 017457          179 AGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGI-T--DFINPATCGDKTVSQVIKEM  250 (371)
Q Consensus       179 ~~~~~g~~VLI~G~g~~G~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~----lga-~--~v~~~~~~~~~~~~~~i~~~  250 (371)
                      ..++++++||-+|+|. |..+..+++..+ ..+|++++.+++..+.+++    .|. .  .++..+-   .++    ...
T Consensus        18 ~~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~----~~~   89 (197)
T 3eey_A           18 MFVKEGDTVVDATCGN-GNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGH---QNM----DKY   89 (197)
T ss_dssp             HHCCTTCEEEESCCTT-SHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCG---GGG----GGT
T ss_pred             hcCCCCCEEEEcCCCC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCH---HHH----hhh
Confidence            4578899999999876 788888888864 2299999999988777755    232 1  2332221   111    112


Q ss_pred             hCCCcCEEEECCCC---------------hHHHHHHHHHhhcCCceEEEECc
Q 017457          251 TDGGADYCFECIGL---------------TSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       251 ~~gg~d~vid~~g~---------------~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      ..+.+|+|+...+-               ...+..+.+.|+++ |+++....
T Consensus        90 ~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~  140 (197)
T 3eey_A           90 IDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTG-GIITVVIY  140 (197)
T ss_dssp             CCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             ccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCC-CEEEEEEc
Confidence            23479999854422               13588999999998 99887653

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=96.17  E-value=0.018  Score=52.21  Aligned_cols=35  Identities=23%  Similarity=0.240  Sum_probs=30.8

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN  217 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~  217 (371)
                      -.|+++||+|+ +++|.+.++.+...|+ +|++++++
T Consensus        44 l~gk~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~   79 (317)
T 3oec_A           44 LQGKVAFITGAARGQGRTHAVRLAQDGA-DIVAIDLC   79 (317)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCC-eEEEEecc
Confidence            46889999998 9999999999889999 89998765

>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}

Probab=96.16  E-value=0.033  Score=51.33  Aligned_cols=134  Identities=16%  Similarity=0.176  Sum_probs=81.9

Q ss_pred             CeEEEEcCChHHHHHHHHHHHc-CCCeEE-EEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457          185 STVAIFGLGAVGLAVAEGARLN-RASKII-GVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  262 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la~~~-g~~~Vi-~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~  262 (371)
                      -+|.|+|.|.+|...+..++.. ++ +++ +.++++++.+.+++.|+. ++       .++.+.+.+   ..+|+|+.|+
T Consensus         6 ~~vgiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~a~~~g~~-~~-------~~~~~ll~~---~~~D~V~i~t   73 (359)
T 3e18_A            6 YQLVIVGYGGMGSYHVTLASAADNL-EVHGVFDILAEKREAAAQKGLK-IY-------ESYEAVLAD---EKVDAVLIAT   73 (359)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTSTTE-EEEEEECSSHHHHHHHHTTTCC-BC-------SCHHHHHHC---TTCCEEEECS
T ss_pred             CcEEEECcCHHHHHHHHHHHhCCCc-EEEEEEcCCHHHHHHHHhcCCc-ee-------CCHHHHhcC---CCCCEEEEcC
Confidence            3689999999999877777665 67 555 557788887777777763 22       234333321   2799999999


Q ss_pred             CChHHHHHHHHHhhcCCceEEEECccCCCCceec-CHHHHhc--CceEEEeeccCCCchhhHHHHHHHHHcCCCC
Q 017457          263 GLTSVMNDAFNSSREGWGKTVILGVEMHGSPISL-NSIEILK--GRSVCGTYFGGLKPRSDIATLAQKYLDKELN  334 (371)
Q Consensus       263 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~-~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~  334 (371)
                      +.....+.+..++..  |.-|++..+........ .......  +..+.-.  .+++....++.+.+++++|.+-
T Consensus        74 p~~~h~~~~~~al~a--GkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~--~~~r~~p~~~~~k~~i~~g~iG  144 (359)
T 3e18_A           74 PNDSHKELAISALEA--GKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVH--QNRRWDEDFLIIKEMFEQKTIG  144 (359)
T ss_dssp             CGGGHHHHHHHHHHT--TCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEE--CGGGGCHHHHHHHHHHHHTTTS
T ss_pred             CcHHHHHHHHHHHHC--CCCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEEE--eeeccCHHHHHHHHHHHcCCCC
Confidence            988778888888887  45555643211110000 0111111  3333322  2233345688888999988663

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=96.16  E-value=0.044  Score=51.49  Aligned_cols=96  Identities=16%  Similarity=0.078  Sum_probs=63.7

Q ss_pred             CeEEEEcCChHHHHHHHHHHHcCC--CeEEEEcCChhHHHHHHH-hC------cce-EEcCCCCCCccHHHHHHHhhCC-
Q 017457          185 STVAIFGLGAVGLAVAEGARLNRA--SKIIGVDINPEKFEIGKK-FG------ITD-FINPATCGDKTVSQVIKEMTDG-  253 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la~~~g~--~~Vi~~~~~~~~~~~~~~-lg------a~~-v~~~~~~~~~~~~~~i~~~~~g-  253 (371)
                      .+|+|+|+|.+|...++.+...|.  .+|++++++.++.+.+.+ ++      ... .+|..+      .+.+.++... 
T Consensus         2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d------~~~l~~~l~~~   75 (405)
T 4ina_A            2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADS------IEELVALINEV   75 (405)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTC------HHHHHHHHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCC------HHHHHHHHHhh
Confidence            479999999999999988877773  389999999988776533 33      211 122221      1233333333 


Q ss_pred             CcCEEEECCCChHHHHHHHHHhhcCCceEEEECc
Q 017457          254 GADYCFECIGLTSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       254 g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      ++|+|+++++.......+..++..+ -.+++.+.
T Consensus        76 ~~DvVin~ag~~~~~~v~~a~l~~g-~~vvD~a~  108 (405)
T 4ina_A           76 KPQIVLNIALPYQDLTIMEACLRTG-VPYLDTAN  108 (405)
T ss_dssp             CCSEEEECSCGGGHHHHHHHHHHHT-CCEEESSC
T ss_pred             CCCEEEECCCcccChHHHHHHHHhC-CCEEEecC
Confidence            6899999998655455666777775 67776644

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=96.14  E-value=0.0037  Score=53.57  Aligned_cols=100  Identities=16%  Similarity=0.070  Sum_probs=68.1

Q ss_pred             CCCCCCeEEEEcCChHHHHHHHHHHHcC------CCeEEEEcCChhHHHHHHHh----C-----cc--eEEcCCCCCCcc
Q 017457          180 GVEVGSTVAIFGLGAVGLAVAEGARLNR------ASKIIGVDINPEKFEIGKKF----G-----IT--DFINPATCGDKT  242 (371)
Q Consensus       180 ~~~~g~~VLI~G~g~~G~~ai~la~~~g------~~~Vi~~~~~~~~~~~~~~l----g-----a~--~v~~~~~~~~~~  242 (371)
                      .++++++||-+|+|. |..+..+++..+      . +|++++.+++..+.+++.    +     .+  .++..+-  ...
T Consensus        77 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~--~~~  152 (227)
T 2pbf_A           77 VLKPGSRAIDVGSGS-GYLTVCMAIKMNVLENKNS-YVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNI--YQV  152 (227)
T ss_dssp             TSCTTCEEEEESCTT-SHHHHHHHHHTTTTTCTTC-EEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCG--GGC
T ss_pred             hCCCCCEEEEECCCC-CHHHHHHHHHhcccCCCCC-EEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECCh--Hhc
Confidence            578899999999977 888889998876      4 899999999887776552    3     11  2222211  011


Q ss_pred             HHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEEC
Q 017457          243 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       243 ~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      +.+..  ...+.||+|+........+..+.+.|+++ |+++..-
T Consensus       153 ~~~~~--~~~~~fD~I~~~~~~~~~~~~~~~~Lkpg-G~lv~~~  193 (227)
T 2pbf_A          153 NEEEK--KELGLFDAIHVGASASELPEILVDLLAEN-GKLIIPI  193 (227)
T ss_dssp             CHHHH--HHHCCEEEEEECSBBSSCCHHHHHHEEEE-EEEEEEE
T ss_pred             ccccC--ccCCCcCEEEECCchHHHHHHHHHhcCCC-cEEEEEE
Confidence            10000  11237999997766555578899999998 9887664

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=96.14  E-value=0.021  Score=50.72  Aligned_cols=92  Identities=10%  Similarity=-0.071  Sum_probs=60.6

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCc---ceEEcCCCCCCccHHHHHHHhhCCCcCE
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGI---TDFINPATCGDKTVSQVIKEMTDGGADY  257 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga---~~v~~~~~~~~~~~~~~i~~~~~gg~d~  257 (371)
                      -.+++++|+|+|++|.+.+..+...|+.+|++..++.++.+.+ ++++.   ..+...++            +. ..+|+
T Consensus       124 l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~------------l~-~~aDi  190 (281)
T 3o8q_A          124 LKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQ------------LK-QSYDV  190 (281)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG------------CC-SCEEE
T ss_pred             ccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHH------------hc-CCCCE
Confidence            3688999999999999998888889977899999998886654 33442   12332221            11 37999


Q ss_pred             EEECCCChHHHHH---HHHHhhcCCceEEEECc
Q 017457          258 CFECIGLTSVMND---AFNSSREGWGKTVILGV  287 (371)
Q Consensus       258 vid~~g~~~~~~~---~~~~l~~~~G~~v~~g~  287 (371)
                      ||++++....-+.   ....++++ ..++++..
T Consensus       191 IInaTp~gm~~~~~~l~~~~l~~~-~~V~DlvY  222 (281)
T 3o8q_A          191 IINSTSASLDGELPAIDPVIFSSR-SVCYDMMY  222 (281)
T ss_dssp             EEECSCCCC----CSCCGGGEEEE-EEEEESCC
T ss_pred             EEEcCcCCCCCCCCCCCHHHhCcC-CEEEEecC
Confidence            9999986531110   12345554 55666654

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=96.13  E-value=0.016  Score=52.65  Aligned_cols=80  Identities=14%  Similarity=0.142  Sum_probs=49.1

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC-----hhHHHHHH----HhCcc-eEEcCCCCCCccHHHHHHHhh
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN-----PEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~-----~~~~~~~~----~lga~-~v~~~~~~~~~~~~~~i~~~~  251 (371)
                      +++++||+|+ |++|.+.++.+...|+ +|+++.++     +++.+.+.    ..+.. .++.-+-.+..++.+.+.+..
T Consensus         4 ~~k~vlVTGas~GIG~aia~~L~~~G~-~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~   82 (324)
T 3u9l_A            4 SKKIILITGASSGFGRLTAEALAGAGH-RVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQII   82 (324)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            3678999998 9999999999999999 89987654     34444332    23432 222211111123333333332


Q ss_pred             C--CCcCEEEECCC
Q 017457          252 D--GGADYCFECIG  263 (371)
Q Consensus       252 ~--gg~d~vid~~g  263 (371)
                      .  +++|+++++.|
T Consensus        83 ~~~g~iD~lVnnAG   96 (324)
T 3u9l_A           83 GEDGRIDVLIHNAG   96 (324)
T ss_dssp             HHHSCCSEEEECCC
T ss_pred             HHcCCCCEEEECCC
Confidence            2  37999999988

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=96.13  E-value=0.015  Score=50.28  Aligned_cols=81  Identities=21%  Similarity=0.217  Sum_probs=48.1

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhHHHHH----HHhCcc-eEEcCCCCCCccHHHHHHHhhC--C
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGV-DINPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--G  253 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~-~~~~~~~~~~----~~lga~-~v~~~~~~~~~~~~~~i~~~~~--g  253 (371)
                      +++++||+|+ |++|.+.++.+...|+ +|+++ .+++++.+.+    ++.+.. ..+..+-.+.+...+.+.+...  +
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~-~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGA-NIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFG   82 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4689999998 9999999998888999 89888 5665544432    223432 2222111011222222222211  3


Q ss_pred             CcCEEEECCCC
Q 017457          254 GADYCFECIGL  264 (371)
Q Consensus       254 g~d~vid~~g~  264 (371)
                      ++|++|++.|.
T Consensus        83 ~~d~vi~~Ag~   93 (247)
T 2hq1_A           83 RIDILVNNAGI   93 (247)
T ss_dssp             CCCEEEECC--
T ss_pred             CCCEEEECCCC
Confidence            79999998874

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=96.12  E-value=0.046  Score=49.29  Aligned_cols=87  Identities=18%  Similarity=0.190  Sum_probs=61.1

Q ss_pred             CeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCC
Q 017457          185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL  264 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~  264 (371)
                      .+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|+...        .+..+.+.     ..|+||-|++.
T Consensus        22 ~~I~iIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~--------~~~~~~~~-----~aDvvi~~vp~   87 (310)
T 3doj_A           22 MEVGFLGLGIMGKAMSMNLLKNGF-KVTVWNRTLSKCDELVEHGASVC--------ESPAEVIK-----KCKYTIAMLSD   87 (310)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEEC--------SSHHHHHH-----HCSEEEECCSS
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCeEc--------CCHHHHHH-----hCCEEEEEcCC
Confidence            579999999999998888888899 99999999999888887775321        23333332     36888888876


Q ss_pred             hHHHHHHH-------HHhhcCCceEEEEC
Q 017457          265 TSVMNDAF-------NSSREGWGKTVILG  286 (371)
Q Consensus       265 ~~~~~~~~-------~~l~~~~G~~v~~g  286 (371)
                      +......+       ..++++ ..++.++
T Consensus        88 ~~~~~~v~~~~~~l~~~l~~g-~~vv~~s  115 (310)
T 3doj_A           88 PCAALSVVFDKGGVLEQICEG-KGYIDMS  115 (310)
T ss_dssp             HHHHHHHHHSTTCGGGGCCTT-CEEEECS
T ss_pred             HHHHHHHHhCchhhhhccCCC-CEEEECC
Confidence            54344444       234443 4555554

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=96.12  E-value=0.0076  Score=53.08  Aligned_cols=36  Identities=14%  Similarity=-0.020  Sum_probs=32.3

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE  219 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~  219 (371)
                      +|+++||+|+ +++|.+.++.+...|+ +|++++++.+
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~   46 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGA-QVLTTARARP   46 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTC-EEEEEESSCC
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCC-EEEEEECCch
Confidence            6899999998 9999999999999999 9999988654

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=96.11  E-value=0.0066  Score=55.09  Aligned_cols=102  Identities=23%  Similarity=0.329  Sum_probs=69.0

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHH----hCcce--EEcCCCCCCccHHHHH
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGITD--FINPATCGDKTVSQVI  247 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~----lga~~--v~~~~~~~~~~~~~~i  247 (371)
                      +.....++++++||-+|+|. |..+..+++..+. .+|++++.+++..+.+++    .|...  ++..      +..+..
T Consensus        67 l~~~l~~~~~~~VLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~------d~~~~~  139 (317)
T 1dl5_A           67 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCG------DGYYGV  139 (317)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES------CGGGCC
T ss_pred             HHHhcCCCCcCEEEEecCCc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEEC------Chhhcc
Confidence            34556788999999999877 7888888887541 379999999988877765    34332  2221      111100


Q ss_pred             HHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEEC
Q 017457          248 KEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       248 ~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      .  ..+.+|+|+....-....+.+.+.|+++ |+++..-
T Consensus       140 ~--~~~~fD~Iv~~~~~~~~~~~~~~~Lkpg-G~lvi~~  175 (317)
T 1dl5_A          140 P--EFSPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVPI  175 (317)
T ss_dssp             G--GGCCEEEEEECSBBSCCCHHHHHHEEEE-EEEEEEB
T ss_pred             c--cCCCeEEEEEcCCHHHHHHHHHHhcCCC-cEEEEEE
Confidence            0  1237999997665444357788899998 9887663

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=96.11  E-value=0.019  Score=50.95  Aligned_cols=82  Identities=16%  Similarity=0.230  Sum_probs=50.9

Q ss_pred             CCCCeEEEEcC-Ch--HHHHHHHHHHHcCCCeEEEEcCCh--hHHHHHHH-hCcceEEcCCCCCCccHHHHHHHhh--CC
Q 017457          182 EVGSTVAIFGL-GA--VGLAVAEGARLNRASKIIGVDINP--EKFEIGKK-FGITDFINPATCGDKTVSQVIKEMT--DG  253 (371)
Q Consensus       182 ~~g~~VLI~G~-g~--~G~~ai~la~~~g~~~Vi~~~~~~--~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~--~g  253 (371)
                      -+++++||+|+ |.  +|.+.+..+...|+ +|++++++.  +..+.+.+ .+...++..+-.+.++..+.+.+..  -+
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMHREGA-ELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWD  102 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHHHTTC-EEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHcCC-EEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcC
Confidence            45789999985 44  99998888888999 899998877  55555533 3322233222101122222233322  13


Q ss_pred             CcCEEEECCCC
Q 017457          254 GADYCFECIGL  264 (371)
Q Consensus       254 g~d~vid~~g~  264 (371)
                      .+|+++++.|.
T Consensus       103 ~id~li~nAg~  113 (280)
T 3nrc_A          103 GLDAIVHSIAF  113 (280)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999998873

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=96.10  E-value=0.01  Score=51.64  Aligned_cols=75  Identities=17%  Similarity=0.199  Sum_probs=48.7

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhC--CCcCEEE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD--GGADYCF  259 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~--gg~d~vi  259 (371)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.  +  ...|-.+  .++..+.+.+...  +++|+++
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~--~--~~~D~~~--~~~~~~~~~~~~~~~g~id~lv   86 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLF--G--VEVDVTD--SDAVDRAFTAVEEHQGPVEVLV   86 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSE--E--EECCTTC--HHHHHHHHHHHHHHHSSCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHhc--C--eeccCCC--HHHHHHHHHHHHHHcCCCCEEE
Confidence            4789999998 9999999998888999 8999988765543221  1  2223222  1222222222221  3789999


Q ss_pred             ECCCC
Q 017457          260 ECIGL  264 (371)
Q Consensus       260 d~~g~  264 (371)
                      ++.|.
T Consensus        87 ~~Ag~   91 (247)
T 1uzm_A           87 SNAGL   91 (247)
T ss_dssp             EECSC
T ss_pred             ECCCC
Confidence            98773

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=96.09  E-value=0.026  Score=51.24  Aligned_cols=90  Identities=17%  Similarity=0.161  Sum_probs=63.2

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcC-ChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI-NPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~-~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      -.|++|.|+|.|.+|...++.++..|. +|++.++ +.++ +.+.++|+.. .       .++.+.+.     ..|+|+.
T Consensus       144 l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~~g~~~-~-------~~l~ell~-----~aDvVil  208 (320)
T 1gdh_A          144 LDNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASS-SDEASYQATF-H-------DSLDSLLS-----VSQFFSL  208 (320)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCH-HHHHHHTCEE-C-------SSHHHHHH-----HCSEEEE
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcCh-hhhhhcCcEE-c-------CCHHHHHh-----hCCEEEE
Confidence            367899999999999999999999999 9999998 7765 3455667632 1       12322222     4788888


Q ss_pred             CCCChH----HH-HHHHHHhhcCCceEEEECc
Q 017457          261 CIGLTS----VM-NDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       261 ~~g~~~----~~-~~~~~~l~~~~G~~v~~g~  287 (371)
                      +++...    .+ ...+..++++ ..++.++.
T Consensus       209 ~~p~~~~t~~~i~~~~l~~mk~g-ailIn~ar  239 (320)
T 1gdh_A          209 NAPSTPETRYFFNKATIKSLPQG-AIVVNTAR  239 (320)
T ss_dssp             CCCCCTTTTTCBSHHHHTTSCTT-EEEEECSC
T ss_pred             eccCchHHHhhcCHHHHhhCCCC-cEEEECCC
Confidence            777432    12 3456778886 77777764

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=96.07  E-value=0.017  Score=49.83  Aligned_cols=79  Identities=18%  Similarity=0.124  Sum_probs=49.0

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhHHHHHH----HhCcc-eE-EcCCCCCCccHHHHHHHhh--CC
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGV-DINPEKFEIGK----KFGIT-DF-INPATCGDKTVSQVIKEMT--DG  253 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~-~~~~~~~~~~~----~lga~-~v-~~~~~~~~~~~~~~i~~~~--~g  253 (371)
                      ++++||+|+ |++|...++.+...|+ +|+++ ++++++.+.+.    +.+.. .. +..+-.+.+...+.+.+..  -+
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGF-ALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLG   79 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcC
Confidence            468999998 9999999998888999 88888 78877665432    22432 12 2211101122222222221  13


Q ss_pred             CcCEEEECCC
Q 017457          254 GADYCFECIG  263 (371)
Q Consensus       254 g~d~vid~~g  263 (371)
                      ++|++|++.|
T Consensus        80 ~~d~li~~Ag   89 (245)
T 2ph3_A           80 GLDTLVNNAG   89 (245)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999887

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=96.07  E-value=0.022  Score=50.03  Aligned_cols=80  Identities=15%  Similarity=0.182  Sum_probs=49.6

Q ss_pred             CCCeEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCCh---hHHHHHHH-hCcceEEcCCCCCCccHHHHHHHhhCC--
Q 017457          183 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINP---EKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDG--  253 (371)
Q Consensus       183 ~g~~VLI~G~---g~~G~~ai~la~~~g~~~Vi~~~~~~---~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~g--  253 (371)
                      +++++||+|+   |++|.+.++.+...|+ +|+++++++   +..+.+.+ .+...++..+-.+.++..+.+.+....  
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   86 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            5789999985   6999999988888999 899998876   33333322 232233322210112233333333332  


Q ss_pred             CcCEEEECCC
Q 017457          254 GADYCFECIG  263 (371)
Q Consensus       254 g~d~vid~~g  263 (371)
                      ++|+++++.|
T Consensus        87 ~iD~lv~~Ag   96 (265)
T 1qsg_A           87 KFDGFVHSIG   96 (265)
T ss_dssp             SEEEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7899999887

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=96.07  E-value=0.036  Score=51.13  Aligned_cols=112  Identities=13%  Similarity=0.146  Sum_probs=73.2

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC----hhH---------HHHHHHhCcceEEcCCCCCCccHHHHHH
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN----PEK---------FEIGKKFGITDFINPATCGDKTVSQVIK  248 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~----~~~---------~~~~~~lga~~v~~~~~~~~~~~~~~i~  248 (371)
                      -++.+|+|.|+|..|..+++++..+|+++|++++++    .+|         .+++++...    ....   .++.+.++
T Consensus       190 l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~----~~~~---~~L~eav~  262 (388)
T 1vl6_A          190 IEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNP----ERLS---GDLETALE  262 (388)
T ss_dssp             TTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCT----TCCC---SCHHHHHT
T ss_pred             CCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhc----cCch---hhHHHHHc
Confidence            467899999999999999999999999899999987    544         222322211    0111   34555543


Q ss_pred             HhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEe
Q 017457          249 EMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGT  310 (371)
Q Consensus       249 ~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~  310 (371)
                           ++|++|-+++....-+..++.|+++ -.++.++.+.    .+..+..... +..+.++
T Consensus       263 -----~ADVlIG~Sap~l~t~emVk~Ma~~-pIIfalSNPt----~E~~p~~a~~~g~~i~at  315 (388)
T 1vl6_A          263 -----GADFFIGVSRGNILKPEWIKKMSRK-PVIFALANPV----PEIDPELAREAGAFIVAT  315 (388)
T ss_dssp             -----TCSEEEECSCSSCSCHHHHTTSCSS-CEEEECCSSS----CSSCHHHHHHTTCSEEEE
T ss_pred             -----cCCEEEEeCCCCccCHHHHHhcCCC-CEEEEcCCCC----CCCCHHHHHHhcCeEEEe
Confidence                 5899998887433346777888875 6665555422    3555555444 4455554

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=96.07  E-value=0.017  Score=52.71  Aligned_cols=89  Identities=24%  Similarity=0.371  Sum_probs=64.8

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      -.|++|.|+|.|.+|...++.++..|. +|++.+++..+ +.+.+.|+...         ++.+.+    . ..|+|+.+
T Consensus       163 l~g~tvgIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~~---------~l~ell----~-~aDvV~l~  226 (335)
T 2g76_A          163 LNGKTLGILGLGRIGREVATRMQSFGM-KTIGYDPIISP-EVSASFGVQQL---------PLEEIW----P-LCDFITVH  226 (335)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSSCH-HHHHHTTCEEC---------CHHHHG----G-GCSEEEEC
T ss_pred             CCcCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcch-hhhhhcCceeC---------CHHHHH----h-cCCEEEEe
Confidence            467899999999999999999999999 99999987665 35566776421         222211    1 57999988


Q ss_pred             CCChH----HH-HHHHHHhhcCCceEEEECc
Q 017457          262 IGLTS----VM-NDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       262 ~g~~~----~~-~~~~~~l~~~~G~~v~~g~  287 (371)
                      ++...    .+ ...+..|+++ +.++.++.
T Consensus       227 ~P~t~~t~~li~~~~l~~mk~g-ailIN~ar  256 (335)
T 2g76_A          227 TPLLPSTTGLLNDNTFAQCKKG-VRVVNCAR  256 (335)
T ss_dssp             CCCCTTTTTSBCHHHHTTSCTT-EEEEECSC
T ss_pred             cCCCHHHHHhhCHHHHhhCCCC-cEEEECCC
Confidence            77532    12 4567788887 88888875

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=96.06  E-value=0.017  Score=50.54  Aligned_cols=41  Identities=10%  Similarity=-0.013  Sum_probs=34.3

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHH---cCCCeEEEEcCChhHHHHH
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARL---NRASKIIGVDINPEKFEIG  224 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~---~g~~~Vi~~~~~~~~~~~~  224 (371)
                      +++++||+|+ |++|.+.+..+..   .|+ +|+++++++++.+.+
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~-~V~~~~r~~~~~~~~   49 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQL   49 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCC-eEEEEeCCHHHHHHH
Confidence            4678999998 9999998877776   899 999999998776654

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=96.06  E-value=0.03  Score=51.46  Aligned_cols=91  Identities=19%  Similarity=0.292  Sum_probs=62.0

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHH-HcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGAR-LNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~-~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      -.|++|.|+|.|.+|...++.++ ..|. +|++.+++.++.+...++|+..+        .++.+.+.     ..|+|+.
T Consensus       161 l~g~~vgIIG~G~IG~~vA~~l~~~~G~-~V~~~d~~~~~~~~~~~~g~~~~--------~~l~ell~-----~aDvVil  226 (348)
T 2w2k_A          161 PRGHVLGAVGLGAIQKEIARKAVHGLGM-KLVYYDVAPADAETEKALGAERV--------DSLEELAR-----RSDCVSV  226 (348)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCC-EEEEECSSCCCHHHHHHHTCEEC--------SSHHHHHH-----HCSEEEE
T ss_pred             CCCCEEEEEEECHHHHHHHHHHHHhcCC-EEEEECCCCcchhhHhhcCcEEe--------CCHHHHhc-----cCCEEEE
Confidence            45789999999999999999999 9999 99999988776666666665421        12222222     3678887


Q ss_pred             CCCChH----HH-HHHHHHhhcCCceEEEECc
Q 017457          261 CIGLTS----VM-NDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       261 ~~g~~~----~~-~~~~~~l~~~~G~~v~~g~  287 (371)
                      ++....    .+ ...+..++++ ..++..+.
T Consensus       227 ~vp~~~~t~~li~~~~l~~mk~g-ailin~sr  257 (348)
T 2w2k_A          227 SVPYMKLTHHLIDEAFFAAMKPG-SRIVNTAR  257 (348)
T ss_dssp             CCCCSGGGTTCBCHHHHHHSCTT-EEEEECSC
T ss_pred             eCCCChHHHHHhhHHHHhcCCCC-CEEEECCC
Confidence            766422    11 3455667775 66666553

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=96.05  E-value=0.014  Score=51.08  Aligned_cols=76  Identities=17%  Similarity=0.260  Sum_probs=47.7

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcc-eEE--cCCCCCCccHHHHHHHhh--CCCcC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-DFI--NPATCGDKTVSQVIKEMT--DGGAD  256 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~-~v~--~~~~~~~~~~~~~i~~~~--~gg~d  256 (371)
                      +++++||+|+ +++|.+.++.+...|+ +|+++++..++.  .++++.. ..+  |-.+   .+-.+.+.+..  -+++|
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~--~~~~~~~~~~~~~D~~~---~~~v~~~~~~~~~~g~id   81 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGA-QVVVLDIRGEDV--VADLGDRARFAAADVTD---EAAVASALDLAETMGTLR   81 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCHHH--HHHTCTTEEEEECCTTC---HHHHHHHHHHHHHHSCEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCchHHH--HHhcCCceEEEECCCCC---HHHHHHHHHHHHHhCCCC
Confidence            4789999998 9999999988888899 899998755432  3344432 222  3222   22222222211  23799


Q ss_pred             EEEECCCC
Q 017457          257 YCFECIGL  264 (371)
Q Consensus       257 ~vid~~g~  264 (371)
                      +++++.|.
T Consensus        82 ~lv~nAg~   89 (257)
T 3tl3_A           82 IVVNCAGT   89 (257)
T ss_dssp             EEEECGGG
T ss_pred             EEEECCCC
Confidence            99999883

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=96.05  E-value=0.016  Score=49.23  Aligned_cols=100  Identities=12%  Similarity=0.139  Sum_probs=67.4

Q ss_pred             cCCCCCCeEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCChhHHHHHHH----hCcc---eEEcCCCCCCccHHHHHHH
Q 017457          179 AGVEVGSTVAIFGLGAVGLAVAEGARLN--RASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIKE  249 (371)
Q Consensus       179 ~~~~~g~~VLI~G~g~~G~~ai~la~~~--g~~~Vi~~~~~~~~~~~~~~----lga~---~v~~~~~~~~~~~~~~i~~  249 (371)
                      ....++++||-+|+|. |..++.+|+..  +. +|++++.+++..+.+++    .|..   .++.      .+..+.+..
T Consensus        54 ~~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~------~d~~~~~~~  125 (223)
T 3duw_A           54 VQIQGARNILEIGTLG-GYSTIWLARGLSSGG-RVVTLEASEKHADIARSNIERANLNDRVEVRT------GLALDSLQQ  125 (223)
T ss_dssp             HHHHTCSEEEEECCTT-SHHHHHHHTTCCSSC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE------SCHHHHHHH
T ss_pred             HHhhCCCEEEEecCCc-cHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE------cCHHHHHHH
Confidence            4456789999999875 78888888876  56 99999999988777654    3532   2222      233343333


Q ss_pred             hhC---CCcCEEEECCCC---hHHHHHHHHHhhcCCceEEEECc
Q 017457          250 MTD---GGADYCFECIGL---TSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       250 ~~~---gg~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      +..   +.||+|+-....   ...++.+.+.|+++ |.++.-..
T Consensus       126 ~~~~~~~~fD~v~~d~~~~~~~~~l~~~~~~L~pg-G~lv~~~~  168 (223)
T 3duw_A          126 IENEKYEPFDFIFIDADKQNNPAYFEWALKLSRPG-TVIIGDNV  168 (223)
T ss_dssp             HHHTTCCCCSEEEECSCGGGHHHHHHHHHHTCCTT-CEEEEESC
T ss_pred             HHhcCCCCcCEEEEcCCcHHHHHHHHHHHHhcCCC-cEEEEeCC
Confidence            322   369999843322   23478888999998 98776554

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=96.03  E-value=0.034  Score=50.49  Aligned_cols=77  Identities=16%  Similarity=0.122  Sum_probs=48.8

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHH----HHHHh-Ccc-eEEcCCCCCCccHHHHHHHhhC-CC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFE----IGKKF-GIT-DFINPATCGDKTVSQVIKEMTD-GG  254 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~----~~~~l-ga~-~v~~~~~~~~~~~~~~i~~~~~-gg  254 (371)
                      .+.+|||+|+ |.+|...++.+...|+ +|++++++.++.+    .+... +.. .++..+-   .+ .+.+.++.. ++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl---~d-~~~~~~~~~~~~   78 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGY-DVVIADNLVNSKREAIARIEKITGKTPAFHETDV---SD-ERALARIFDAHP   78 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCT---TC-HHHHHHHHHHSC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCC-cEEEEecCCcchHHHHHHHHhhcCCCceEEEeec---CC-HHHHHHHHhccC
Confidence            4679999998 9999999999988999 9999987654322    22221 221 2232221   11 122333322 37


Q ss_pred             cCEEEECCCC
Q 017457          255 ADYCFECIGL  264 (371)
Q Consensus       255 ~d~vid~~g~  264 (371)
                      +|+|+++.+.
T Consensus        79 ~d~vih~A~~   88 (341)
T 3enk_A           79 ITAAIHFAAL   88 (341)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECccc
Confidence            9999998874

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=96.03  E-value=0.012  Score=51.30  Aligned_cols=75  Identities=21%  Similarity=0.268  Sum_probs=49.0

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceE-EcCCCCCCccHHHHHHHhh--CCCcCEE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMT--DGGADYC  258 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~--~gg~d~v  258 (371)
                      +++++||+|+ |++|.+.+..+...|+ +|++++++++.    ++.+...+ .|-.+  .+++.+.+.+..  -+++|++
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~----~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~g~id~l   78 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGA-KVTGFDQAFTQ----EQYPFATEVMDVAD--AAQVAQVCQRLLAETERLDAL   78 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCCCS----SCCSSEEEECCTTC--HHHHHHHHHHHHHHCSCCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCchhh----hcCCceEEEcCCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence            4789999998 9999999999988999 99999887652    22343222 23222  122333333222  2379999


Q ss_pred             EECCCC
Q 017457          259 FECIGL  264 (371)
Q Consensus       259 id~~g~  264 (371)
                      +++.|.
T Consensus        79 v~~Ag~   84 (250)
T 2fwm_X           79 VNAAGI   84 (250)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            998873

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=96.03  E-value=0.043  Score=48.45  Aligned_cols=92  Identities=13%  Similarity=0.057  Sum_probs=63.0

Q ss_pred             CCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEE
Q 017457          180 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTDGGADYC  258 (371)
Q Consensus       180 ~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~v  258 (371)
                      ....+++++|+|+|++|.+++.-+...|+++|+++.++.+|.+.+ ++++.+ ..+  .   ..         ...+|+|
T Consensus       115 ~~~~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~-~~~--~---~~---------~~~~Div  179 (271)
T 1npy_A          115 HLNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYA-YIN--S---LE---------NQQADIL  179 (271)
T ss_dssp             TCCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCE-EES--C---CT---------TCCCSEE
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc-cch--h---hh---------cccCCEE
Confidence            344678999999999999999888889987899999998875554 456642 111  1   00         1268999


Q ss_pred             EECCCChHHH-------HHHHHHhhcCCceEEEECc
Q 017457          259 FECIGLTSVM-------NDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       259 id~~g~~~~~-------~~~~~~l~~~~G~~v~~g~  287 (371)
                      +++++.....       ......+.++ ..++++..
T Consensus       180 InaTp~gm~~~~~~~~~~~~~~~l~~~-~~v~DlvY  214 (271)
T 1npy_A          180 VNVTSIGMKGGKEEMDLAFPKAFIDNA-SVAFDVVA  214 (271)
T ss_dssp             EECSSTTCTTSTTTTSCSSCHHHHHHC-SEEEECCC
T ss_pred             EECCCCCccCccccCCCCCCHHHcCCC-CEEEEeec
Confidence            9999864311       1113456675 77777764

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=96.02  E-value=0.015  Score=51.73  Aligned_cols=40  Identities=15%  Similarity=0.091  Sum_probs=33.8

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hHHHH
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP-EKFEI  223 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~-~~~~~  223 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|+++++++ ++.+.
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~   63 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGY-RVVIHYHNSAEAAVS   63 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTC-EEEEEESSCHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-eEEEEeCCchHHHHH
Confidence            4789999998 9999999988888999 899999887 65543

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=96.02  E-value=0.026  Score=51.14  Aligned_cols=78  Identities=19%  Similarity=0.176  Sum_probs=50.3

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC---------ChhHHHH----HHHhCcceEEcCCCCCCccHHHHHH
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI---------NPEKFEI----GKKFGITDFINPATCGDKTVSQVIK  248 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~---------~~~~~~~----~~~lga~~v~~~~~~~~~~~~~~i~  248 (371)
                      .|+++||+|+ |++|.+.+..+...|+ +|+++++         +.++.+.    ++..+...+.|..+  ..+..+.+.
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga-~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~--~~~~~~~~~   84 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDS--VEAGEKLVK   84 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCC--GGGHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCC--HHHHHHHHH
Confidence            5789999998 9999999998888999 8998753         4444433    23334444445443  122323333


Q ss_pred             Hhh--CCCcCEEEECCC
Q 017457          249 EMT--DGGADYCFECIG  263 (371)
Q Consensus       249 ~~~--~gg~d~vid~~g  263 (371)
                      +..  -+++|++|++.|
T Consensus        85 ~~~~~~g~iD~lVnnAG  101 (319)
T 1gz6_A           85 TALDTFGRIDVVVNNAG  101 (319)
T ss_dssp             HHHHHTSCCCEEEECCC
T ss_pred             HHHHHcCCCCEEEECCC
Confidence            222  237999999887

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=96.02  E-value=0.058  Score=45.79  Aligned_cols=75  Identities=12%  Similarity=0.052  Sum_probs=55.1

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCC
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL  264 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~  264 (371)
                      +|+|+|+|.+|...++.+...|. .|+++++++++.+.+.+ .|...+. .+.   .+ .+.+.+..-.++|+++-+++.
T Consensus         2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~~~~~~i~-gd~---~~-~~~l~~a~i~~ad~vi~~~~~   75 (218)
T 3l4b_C            2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKDRELCEEFAKKLKATIIH-GDG---SH-KEILRDAEVSKNDVVVILTPR   75 (218)
T ss_dssp             CEEEECCHHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHHSSSEEEE-SCT---TS-HHHHHHHTCCTTCEEEECCSC
T ss_pred             EEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHcCCeEEE-cCC---CC-HHHHHhcCcccCCEEEEecCC
Confidence            58999999999999999999999 89999999998887654 5654333 222   12 233444322389999999998


Q ss_pred             hH
Q 017457          265 TS  266 (371)
Q Consensus       265 ~~  266 (371)
                      ..
T Consensus        76 d~   77 (218)
T 3l4b_C           76 DE   77 (218)
T ss_dssp             HH
T ss_pred             cH
Confidence            66

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=96.01  E-value=0.015  Score=51.17  Aligned_cols=73  Identities=18%  Similarity=0.213  Sum_probs=47.5

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceE-EcCCCCCCccHHHHHHHhhC--CCcCEE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMTD--GGADYC  258 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~--gg~d~v  258 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|+++++++++     ...+..+ .|-.+  .++..+.+.+...  +++|++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~-----~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~g~iD~l   78 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGS-KVIDLSIHDPG-----EAKYDHIECDVTN--PDQVKASIDHIFKEYGSISVL   78 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSCCC-----SCSSEEEECCTTC--HHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEecCccc-----CCceEEEEecCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence            4789999998 9999999999988999 89999887654     1112211 23222  1222222222221  379999


Q ss_pred             EECCC
Q 017457          259 FECIG  263 (371)
Q Consensus       259 id~~g  263 (371)
                      +++.|
T Consensus        79 v~~Ag   83 (264)
T 2dtx_A           79 VNNAG   83 (264)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99887

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=96.01  E-value=0.017  Score=48.65  Aligned_cols=96  Identities=15%  Similarity=0.134  Sum_probs=67.5

Q ss_pred             cCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcce--EEcCCCCCCccHHHHHHHhhCCCcC
Q 017457          179 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD--FINPATCGDKTVSQVIKEMTDGGAD  256 (371)
Q Consensus       179 ~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~--v~~~~~~~~~~~~~~i~~~~~gg~d  256 (371)
                      ..+.++.+||-+|+|. |..+..+++. |. +|++++.+++..+.+++.+...  ++..+-   .++      ...+.+|
T Consensus        42 ~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~---~~~------~~~~~~D  109 (218)
T 3ou2_A           42 RAGNIRGDVLELASGT-GYWTRHLSGL-AD-RVTALDGSAEMIAEAGRHGLDNVEFRQQDL---FDW------TPDRQWD  109 (218)
T ss_dssp             TTTTSCSEEEEESCTT-SHHHHHHHHH-SS-EEEEEESCHHHHHHHGGGCCTTEEEEECCT---TSC------CCSSCEE
T ss_pred             hcCCCCCeEEEECCCC-CHHHHHHHhc-CC-eEEEEeCCHHHHHHHHhcCCCCeEEEeccc---ccC------CCCCcee
Confidence            4477888999999876 7777777777 77 9999999999999988866322  222211   111      1233899


Q ss_pred             EEEECCC-----C---hHHHHHHHHHhhcCCceEEEECc
Q 017457          257 YCFECIG-----L---TSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       257 ~vid~~g-----~---~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      +|+....     .   ...++.+.+.|+++ |.++....
T Consensus       110 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~  147 (218)
T 3ou2_A          110 AVFFAHWLAHVPDDRFEAFWESVRSAVAPG-GVVEFVDV  147 (218)
T ss_dssp             EEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             EEEEechhhcCCHHHHHHHHHHHHHHcCCC-eEEEEEeC
Confidence            9985432     2   33478888999998 99887754

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=96.01  E-value=0.02  Score=49.41  Aligned_cols=77  Identities=17%  Similarity=0.178  Sum_probs=48.9

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEE-EcCChhHHHHHH----HhCcc-eEE--cCCCCCCccHHHHHHHhh--C
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIG-VDINPEKFEIGK----KFGIT-DFI--NPATCGDKTVSQVIKEMT--D  252 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~-~~~~~~~~~~~~----~lga~-~v~--~~~~~~~~~~~~~i~~~~--~  252 (371)
                      |+++||+|+ |++|...++.+...|+ +|++ ..+++++.+.+.    +.+.. ..+  |-.+  .+++.+.+.+..  -
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   77 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK--EADVEAMMKTAIDAW   77 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTS--HHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCC--HHHHHHHHHHHHHHc
Confidence            578999998 9999999999988999 8888 478876655432    23432 122  2222  122223233222  2


Q ss_pred             CCcCEEEECCC
Q 017457          253 GGADYCFECIG  263 (371)
Q Consensus       253 gg~d~vid~~g  263 (371)
                      +++|++|++.|
T Consensus        78 g~id~li~~Ag   88 (244)
T 1edo_A           78 GTIDVVVNNAG   88 (244)
T ss_dssp             SCCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37999999877

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.01  E-value=0.066  Score=48.02  Aligned_cols=88  Identities=18%  Similarity=0.219  Sum_probs=60.9

Q ss_pred             CeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCC
Q 017457          185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL  264 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~  264 (371)
                      .+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|...+.+.-.    +.   +     ...|+||-|++.
T Consensus         8 ~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~~~~~~----e~---~-----~~aDvvi~~vp~   74 (303)
T 3g0o_A            8 FHVGIVGLGSMGMGAARSCLRAGL-STWGADLNPQACANLLAEGACGAAASAR----EF---A-----GVVDALVILVVN   74 (303)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEESSST----TT---T-----TTCSEEEECCSS
T ss_pred             CeEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCCccccCCHH----HH---H-----hcCCEEEEECCC
Confidence            579999999999998888888899 9999999999999988888654222111    11   0     156888888877


Q ss_pred             hHHHHHHH-------HHhhcCCceEEEEC
Q 017457          265 TSVMNDAF-------NSSREGWGKTVILG  286 (371)
Q Consensus       265 ~~~~~~~~-------~~l~~~~G~~v~~g  286 (371)
                      +...+..+       ..++++ ..++..+
T Consensus        75 ~~~~~~v~~~~~~l~~~l~~g-~ivv~~s  102 (303)
T 3g0o_A           75 AAQVRQVLFGEDGVAHLMKPG-SAVMVSS  102 (303)
T ss_dssp             HHHHHHHHC--CCCGGGSCTT-CEEEECS
T ss_pred             HHHHHHHHhChhhHHhhCCCC-CEEEecC
Confidence            54344443       334443 4555554

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=96.00  E-value=0.033  Score=47.99  Aligned_cols=72  Identities=17%  Similarity=0.037  Sum_probs=49.2

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHc--CCCeEEEEcCChhHHHHHHHhCcceE-EcCCCCCCccHHHHHHHhhCCCcCEE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLN--RASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMTDGGADYC  258 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~--g~~~Vi~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~gg~d~v  258 (371)
                      .+++|||+|+ |.+|...++.+...  |+ +|+++++++++.+.+ ..++..+ .|..     + .+.+.++.. ++|+|
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~-~V~~~~r~~~~~~~~-~~~~~~~~~D~~-----d-~~~~~~~~~-~~d~v   73 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSAQGKEKI-GGEADVFIGDIT-----D-ADSINPAFQ-GIDAL   73 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTC-EEEEEESCHHHHHHT-TCCTTEEECCTT-----S-HHHHHHHHT-TCSEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCc-EEEEEEcCCCchhhc-CCCeeEEEecCC-----C-HHHHHHHHc-CCCEE
Confidence            4678999998 99999999888888  78 999999987765443 1122222 1222     2 233444433 69999


Q ss_pred             EECCC
Q 017457          259 FECIG  263 (371)
Q Consensus       259 id~~g  263 (371)
                      |++.+
T Consensus        74 i~~a~   78 (253)
T 1xq6_A           74 VILTS   78 (253)
T ss_dssp             EECCC
T ss_pred             EEecc
Confidence            99876

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=95.99  E-value=0.014  Score=51.53  Aligned_cols=94  Identities=14%  Similarity=0.149  Sum_probs=64.0

Q ss_pred             cccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457          164 LSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT  242 (371)
Q Consensus       164 ~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~  242 (371)
                      +||+...+...+.+..---.|++++|+|. +.+|..++.++...|+ +|+++.+..                      .+
T Consensus       141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gA-tVtv~hs~T----------------------~~  197 (286)
T 4a5o_A          141 RPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLGGC-TVTVTHRFT----------------------RD  197 (286)
T ss_dssp             CCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTC-EEEEECTTC----------------------SC
T ss_pred             CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCC----------------------cC
Confidence            44444444443322222357999999998 5589999999999999 888886421                      23


Q ss_pred             HHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECcc
Q 017457          243 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       243 ~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      +.+.++     .+|+++.++|.+..+.  -+.++++ ..++++|..
T Consensus       198 L~~~~~-----~ADIVI~Avg~p~~I~--~~~vk~G-avVIDvgi~  235 (286)
T 4a5o_A          198 LADHVS-----RADLVVVAAGKPGLVK--GEWIKEG-AIVIDVGIN  235 (286)
T ss_dssp             HHHHHH-----TCSEEEECCCCTTCBC--GGGSCTT-CEEEECCSC
T ss_pred             HHHHhc-----cCCEEEECCCCCCCCC--HHHcCCC-eEEEEeccc
Confidence            333333     5899999999875332  2456886 889999874

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=95.99  E-value=0.0059  Score=52.88  Aligned_cols=97  Identities=18%  Similarity=0.183  Sum_probs=67.4

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcc-----eEEcCCCCCCccHHHHHHHhhCCCc
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-----DFINPATCGDKTVSQVIKEMTDGGA  255 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~-----~v~~~~~~~~~~~~~~i~~~~~gg~  255 (371)
                      ..+|.+||-+|+|. |..+..+++..+. +|++++.+++-.+.+++....     .++.      .+.......+..+.|
T Consensus        58 ~~~G~rVLdiG~G~-G~~~~~~~~~~~~-~v~~id~~~~~~~~a~~~~~~~~~~~~~~~------~~a~~~~~~~~~~~F  129 (236)
T 3orh_A           58 SSKGGRVLEVGFGM-AIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLK------GLWEDVAPTLPDGHF  129 (236)
T ss_dssp             TTTCEEEEEECCTT-SHHHHHHTTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEE------SCHHHHGGGSCTTCE
T ss_pred             ccCCCeEEEECCCc-cHHHHHHHHhCCc-EEEEEeCCHHHHHHHHHHHhhCCCceEEEe------ehHHhhcccccccCC
Confidence            47899999999875 7777788877676 899999999988888764321     2222      233333334444479


Q ss_pred             CEEE-ECCCC----------hHHHHHHHHHhhcCCceEEEEC
Q 017457          256 DYCF-ECIGL----------TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       256 d~vi-d~~g~----------~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      |.|+ |+...          ...++.+.+.|+|+ |+++.+.
T Consensus       130 D~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPG-G~l~f~~  170 (236)
T 3orh_A          130 DGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPG-GVLTYCN  170 (236)
T ss_dssp             EEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEE-EEEEECC
T ss_pred             ceEEEeeeecccchhhhcchhhhhhhhhheeCCC-CEEEEEe
Confidence            8884 65432          12367788999998 9998775

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=95.98  E-value=0.063  Score=48.50  Aligned_cols=91  Identities=23%  Similarity=0.254  Sum_probs=63.6

Q ss_pred             CeEEEEcCChHHHHHHHHHHHcCCC-eEEEEcCChhHHHHHHHhCcc-eEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457          185 STVAIFGLGAVGLAVAEGARLNRAS-KIIGVDINPEKFEIGKKFGIT-DFINPATCGDKTVSQVIKEMTDGGADYCFECI  262 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la~~~g~~-~Vi~~~~~~~~~~~~~~lga~-~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~  262 (371)
                      .+|.|+|.|.+|.+.++.++..|.. +|++.++++++.+.+.+.|.. ...+.-.    ++  .+     ..+|+||-|+
T Consensus        34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~----~~--~~-----~~aDvVilav  102 (314)
T 3ggo_A           34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIA----KV--ED-----FSPDFVMLSS  102 (314)
T ss_dssp             SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTT----GG--GG-----GCCSEEEECS
T ss_pred             CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHH----HH--hh-----ccCCEEEEeC
Confidence            6899999999999998888888864 799999999999999888863 2322111    10  01     1689999998


Q ss_pred             CChHH---HHHHHHHhhcCCceEEEECc
Q 017457          263 GLTSV---MNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       263 g~~~~---~~~~~~~l~~~~G~~v~~g~  287 (371)
                      .....   +..+...++++ ..+++++.
T Consensus       103 p~~~~~~vl~~l~~~l~~~-~iv~d~~S  129 (314)
T 3ggo_A          103 PVRTFREIAKKLSYILSED-ATVTDQGS  129 (314)
T ss_dssp             CGGGHHHHHHHHHHHSCTT-CEEEECCS
T ss_pred             CHHHHHHHHHHHhhccCCC-cEEEECCC
Confidence            86552   33444455565 56666654

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=95.97  E-value=0.047  Score=49.84  Aligned_cols=88  Identities=18%  Similarity=0.363  Sum_probs=61.5

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      -.|++|.|+|.|.+|...++.++..|. +|++.+++.++ +.+.+.|+..         .++.+.+.     ..|+|+.+
T Consensus       148 l~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~---------~~l~~~l~-----~aDvVil~  211 (334)
T 2dbq_A          148 VYGKTIGIIGLGRIGQAIAKRAKGFNM-RILYYSRTRKE-EVERELNAEF---------KPLEDLLR-----ESDFVVLA  211 (334)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHHCCEE---------CCHHHHHH-----HCSEEEEC
T ss_pred             CCCCEEEEEccCHHHHHHHHHHHhCCC-EEEEECCCcch-hhHhhcCccc---------CCHHHHHh-----hCCEEEEC
Confidence            357899999999999999999999999 99999988876 5555566421         12222222     46888877


Q ss_pred             CCChH----HH-HHHHHHhhcCCceEEEEC
Q 017457          262 IGLTS----VM-NDAFNSSREGWGKTVILG  286 (371)
Q Consensus       262 ~g~~~----~~-~~~~~~l~~~~G~~v~~g  286 (371)
                      ++...    .+ ...+..++++ ..++..+
T Consensus       212 vp~~~~t~~~i~~~~~~~mk~~-ailIn~s  240 (334)
T 2dbq_A          212 VPLTRETYHLINEERLKLMKKT-AILINIA  240 (334)
T ss_dssp             CCCCTTTTTCBCHHHHHHSCTT-CEEEECS
T ss_pred             CCCChHHHHhhCHHHHhcCCCC-cEEEECC
Confidence            76432    12 3556677775 6776665

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=95.97  E-value=0.015  Score=51.05  Aligned_cols=80  Identities=19%  Similarity=0.212  Sum_probs=50.0

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHHHH----HHhCcc-eEEcCCCCCCccHHHHHHHhhC--C
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--G  253 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~-~~~~~~~~----~~lga~-~v~~~~~~~~~~~~~~i~~~~~--g  253 (371)
                      ++++|||+|+ |++|.+.+..+...|+ +|+++++ ++++.+.+    ++.+.. .++..+-.+...+.+.+.+...  +
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG   98 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4789999998 9999999998888999 8999887 66655433    223433 2222111011222222322221  3


Q ss_pred             CcCEEEECCC
Q 017457          254 GADYCFECIG  263 (371)
Q Consensus       254 g~d~vid~~g  263 (371)
                      ++|+++++.|
T Consensus        99 ~~d~vi~~Ag  108 (274)
T 1ja9_A           99 GLDFVMSNSG  108 (274)
T ss_dssp             CEEEEECCCC
T ss_pred             CCCEEEECCC
Confidence            7999999877

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=95.97  E-value=0.025  Score=50.05  Aligned_cols=95  Identities=16%  Similarity=0.145  Sum_probs=61.9

Q ss_pred             CeEEEEcC-ChHHHHHHHHHHHc--CCCeEEEEcCChhHHHHHHHhCcceEE-cCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          185 STVAIFGL-GAVGLAVAEGARLN--RASKIIGVDINPEKFEIGKKFGITDFI-NPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la~~~--g~~~Vi~~~~~~~~~~~~~~lga~~v~-~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      ++|||+|+ |.+|...++.+...  |. +|+++++++++.+.+...+...+. |..+      .+.+.+... ++|+||+
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~D~~d------~~~l~~~~~-~~d~vi~   72 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPAS-QIIAIVRNVEKASTLADQGVEVRHGDYNQ------PESLQKAFA-GVSKLLF   72 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTTHHHHHTTCEEEECCTTC------HHHHHHHTT-TCSEEEE
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCC-eEEEEEcCHHHHhHHhhcCCeEEEeccCC------HHHHHHHHh-cCCEEEE
Confidence            36899998 99999998888777  88 899999887776655544544332 2222      233444433 6999999


Q ss_pred             CCCCh-------HHHHHHHHHhhcC-CceEEEECc
Q 017457          261 CIGLT-------SVMNDAFNSSREG-WGKTVILGV  287 (371)
Q Consensus       261 ~~g~~-------~~~~~~~~~l~~~-~G~~v~~g~  287 (371)
                      +.+..       .....+++.+... -++++.++.
T Consensus        73 ~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss  107 (287)
T 2jl1_A           73 ISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGY  107 (287)
T ss_dssp             CCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred             cCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence            88741       1234555555543 137887765

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=95.96  E-value=0.013  Score=48.28  Aligned_cols=99  Identities=16%  Similarity=0.217  Sum_probs=65.7

Q ss_pred             HcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc--eEEcCCCCCCccHHHHHHHhh
Q 017457          178 VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       178 ~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~--~v~~~~~~~~~~~~~~i~~~~  251 (371)
                      ...++++++||=+|+|. |..+..+++. +. +|++++.+++..+.+++    .|.+  .++....   .+    +....
T Consensus        17 ~~~~~~~~~vLDiGcG~-G~~~~~la~~-~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~---~~----l~~~~   86 (185)
T 3mti_A           17 AEVLDDESIVVDATMGN-GNDTAFLAGL-SK-KVYAFDVQEQALGKTSQRLSDLGIENTELILDGH---EN----LDHYV   86 (185)
T ss_dssp             HTTCCTTCEEEESCCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCG---GG----GGGTC
T ss_pred             HHhCCCCCEEEEEcCCC-CHHHHHHHHh-CC-EEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcH---HH----HHhhc
Confidence            34578899999999876 7788888877 76 99999999988777654    3432  2332111   11    11223


Q ss_pred             CCCcCEEEECCCC-----------h----HHHHHHHHHhhcCCceEEEECc
Q 017457          252 DGGADYCFECIGL-----------T----SVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       252 ~gg~d~vid~~g~-----------~----~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      ++.||+|+-..+-           .    ..+..+.+.|+++ |+++....
T Consensus        87 ~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~  136 (185)
T 3mti_A           87 REPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVG-GRLAIMIY  136 (185)
T ss_dssp             CSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             cCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCC-cEEEEEEe
Confidence            3479999754221           1    2357888999998 99887654

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=95.96  E-value=0.017  Score=53.88  Aligned_cols=91  Identities=16%  Similarity=0.098  Sum_probs=62.1

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      -.|++|.|+|.|.+|...++.++..|. +|++.+++..+.+..+++|+..+        .++.+    +.. ..|+|+.+
T Consensus       189 l~gktvGIIGlG~IG~~vA~~l~a~G~-~V~~~d~~~~~~~~~~~~G~~~~--------~~l~e----ll~-~aDvV~l~  254 (393)
T 2nac_A          189 LEAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNLTWH--------ATRED----MYP-VCDVVTLN  254 (393)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTCEEC--------SSHHH----HGG-GCSEEEEC
T ss_pred             CCCCEEEEEeECHHHHHHHHHHHhCCC-EEEEEcCCccchhhHhhcCceec--------CCHHH----HHh-cCCEEEEe
Confidence            368899999999999999999999999 99999988766666666775421        12221    111 46788777


Q ss_pred             CCChH----HH-HHHHHHhhcCCceEEEECc
Q 017457          262 IGLTS----VM-NDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       262 ~g~~~----~~-~~~~~~l~~~~G~~v~~g~  287 (371)
                      ++...    .+ ...+..|+++ ..++.++.
T Consensus       255 ~Plt~~t~~li~~~~l~~mk~g-ailIN~aR  284 (393)
T 2nac_A          255 CPLHPETEHMINDETLKLFKRG-AYIVNTAR  284 (393)
T ss_dssp             SCCCTTTTTCBSHHHHTTSCTT-EEEEECSC
T ss_pred             cCCchHHHHHhhHHHHhhCCCC-CEEEECCC
Confidence            66321    12 3455667775 66776663

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=95.96  E-value=0.018  Score=50.53  Aligned_cols=83  Identities=14%  Similarity=0.191  Sum_probs=51.6

Q ss_pred             CCCCCCeEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHHHHHHhh-
Q 017457          180 GVEVGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMT-  251 (371)
Q Consensus       180 ~~~~g~~VLI~G~---g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~~-  251 (371)
                      ...++++|||+|+   +++|.+.+..+...|+ +|+++++++...+.+++    .+...++.-+-.+..+..+.+.+.. 
T Consensus        10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   88 (271)
T 3ek2_A           10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKT   88 (271)
T ss_dssp             CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHH
Confidence            3567899999984   6999999888888999 99999887654444433    3322233222111122222333222 


Q ss_pred             -CCCcCEEEECCC
Q 017457          252 -DGGADYCFECIG  263 (371)
Q Consensus       252 -~gg~d~vid~~g  263 (371)
                       -+++|++|++.|
T Consensus        89 ~~g~id~lv~nAg  101 (271)
T 3ek2_A           89 HWDSLDGLVHSIG  101 (271)
T ss_dssp             HCSCEEEEEECCC
T ss_pred             HcCCCCEEEECCc
Confidence             137999999877

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=95.96  E-value=0.014  Score=51.14  Aligned_cols=90  Identities=16%  Similarity=0.056  Sum_probs=58.8

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      ++ +++|+|+|++|.+++..+...|+++|++..++.++.+.+.+ ++.   ...     .+..+.+.     .+|+||++
T Consensus       108 ~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~---~~~-----~~~~~~~~-----~aDiVIna  173 (253)
T 3u62_A          108 KE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKI---FSL-----DQLDEVVK-----KAKSLFNT  173 (253)
T ss_dssp             CS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEE---EEG-----GGHHHHHH-----TCSEEEEC
T ss_pred             CC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHccc---CCH-----HHHHhhhc-----CCCEEEEC
Confidence            46 99999999999999999989998889999999887665432 221   111     12222221     68999998


Q ss_pred             CCChHH---HHHHHHHhhcCCceEEEECc
Q 017457          262 IGLTSV---MNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       262 ~g~~~~---~~~~~~~l~~~~G~~v~~g~  287 (371)
                      ++....   .......++++ ..++++..
T Consensus       174 tp~gm~p~~~~i~~~~l~~~-~~V~Divy  201 (253)
T 3u62_A          174 TSVGMKGEELPVSDDSLKNL-SLVYDVIY  201 (253)
T ss_dssp             SSTTTTSCCCSCCHHHHTTC-SEEEECSS
T ss_pred             CCCCCCCCCCCCCHHHhCcC-CEEEEeeC
Confidence            863210   00012446665 66777754

>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}

Probab=95.96  E-value=0.034  Score=47.99  Aligned_cols=102  Identities=18%  Similarity=0.204  Sum_probs=66.8

Q ss_pred             cCCCCCCeEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHHHHHHhh-
Q 017457          179 AGVEVGSTVAIFGLGAVGLAVAEGARLN--RASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMT-  251 (371)
Q Consensus       179 ~~~~~g~~VLI~G~g~~G~~ai~la~~~--g~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~~-  251 (371)
                      ....++++||-+|+|. |..++.+|+.+  +. +|++++.+++..+.+++    .|...-+....   .+..+.+..+. 
T Consensus        66 ~~~~~~~~VLeiG~G~-G~~~~~la~~~~~~~-~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~---gda~~~l~~l~~  140 (237)
T 3c3y_A           66 LKLVNAKKTIEVGVFT-GYSLLLTALSIPDDG-KITAIDFDREAYEIGLPFIRKAGVEHKINFIE---SDAMLALDNLLQ  140 (237)
T ss_dssp             HHHTTCCEEEEECCTT-SHHHHHHHHHSCTTC-EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE---SCHHHHHHHHHH
T ss_pred             HHhhCCCEEEEeCCCC-CHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHHHHHHHHh
Confidence            4456788999999865 77788888886  45 99999999988777654    35421111111   23444444432 


Q ss_pred             ----CCCcCEEEECCCC---hHHHHHHHHHhhcCCceEEEEC
Q 017457          252 ----DGGADYCFECIGL---TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       252 ----~gg~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                          .+.||+||-....   ...++.+.+.|+++ |.++.-.
T Consensus       141 ~~~~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pG-G~lv~d~  181 (237)
T 3c3y_A          141 GQESEGSYDFGFVDADKPNYIKYHERLMKLVKVG-GIVAYDN  181 (237)
T ss_dssp             STTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             ccCCCCCcCEEEECCchHHHHHHHHHHHHhcCCC-eEEEEec
Confidence                3479999843322   23478888999998 9887654

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=95.95  E-value=0.082  Score=46.99  Aligned_cols=75  Identities=16%  Similarity=0.198  Sum_probs=51.6

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-Hh----Ccc-eEEcCCCCCCccHHHHHHHhhCCC
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF----GIT-DFINPATCGDKTVSQVIKEMTDGG  254 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~l----ga~-~v~~~~~~~~~~~~~~i~~~~~gg  254 (371)
                      .+++++||+|+ |++|.+.+..+...|+ +|+++.++.++.+.+. ++    +.. ...|..+   .   +.+.+... .
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~-~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~---~---~~~~~~~~-~  188 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETAD---D---ASRAEAVK-G  188 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCS---H---HHHHHHTT-T
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCC---H---HHHHHHHH-h
Confidence            46899999994 9999999999999999 7999999887766543 22    222 1223222   1   23333332 5


Q ss_pred             cCEEEECCCC
Q 017457          255 ADYCFECIGL  264 (371)
Q Consensus       255 ~d~vid~~g~  264 (371)
                      +|+++++++.
T Consensus       189 ~DvlVn~ag~  198 (287)
T 1lu9_A          189 AHFVFTAGAI  198 (287)
T ss_dssp             CSEEEECCCT
T ss_pred             CCEEEECCCc
Confidence            8999999973

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=95.95  E-value=0.022  Score=49.88  Aligned_cols=80  Identities=18%  Similarity=0.292  Sum_probs=48.7

Q ss_pred             CCCeEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChh---HHHHHHH-hCcceEEcCCCCCCccHHHHHHHhhC--C
Q 017457          183 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINPE---KFEIGKK-FGITDFINPATCGDKTVSQVIKEMTD--G  253 (371)
Q Consensus       183 ~g~~VLI~G~---g~~G~~ai~la~~~g~~~Vi~~~~~~~---~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~--g  253 (371)
                      .++++||+|+   |++|.+.++.+...|+ +|++++++++   ..+.+.+ .+...++..+-.+.++..+.+.+...  +
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG   85 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4789999985   6999998888888899 8999998875   3333322 33222332211011222222222221  3


Q ss_pred             CcCEEEECCC
Q 017457          254 GADYCFECIG  263 (371)
Q Consensus       254 g~d~vid~~g  263 (371)
                      ++|+++++.|
T Consensus        86 ~iD~lv~~Ag   95 (261)
T 2wyu_A           86 GLDYLVHAIA   95 (261)
T ss_dssp             SEEEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999887

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=95.94  E-value=0.037  Score=49.37  Aligned_cols=36  Identities=31%  Similarity=0.315  Sum_probs=31.8

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      ...+|+|+|+|++|..++..+.+.|..++++++.+.
T Consensus        35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~   70 (292)
T 3h8v_A           35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK   70 (292)
T ss_dssp             GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence            457899999999999999999999998999998654

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=95.93  E-value=0.024  Score=49.20  Aligned_cols=81  Identities=20%  Similarity=0.227  Sum_probs=49.2

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHHHH----HHhCcce-EEcCCCCCCccHHHHHHHhhC--C
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMTD--G  253 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~-~~~~~~~~----~~lga~~-v~~~~~~~~~~~~~~i~~~~~--g  253 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|+++++ +.++.+.+    ++.+.+. .+.-+-.+.++..+.+.+...  +
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGY-NVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG   81 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4689999998 9999999998889999 8887765 44544433    2334332 222111011222222332221  3


Q ss_pred             CcCEEEECCCC
Q 017457          254 GADYCFECIGL  264 (371)
Q Consensus       254 g~d~vid~~g~  264 (371)
                      ++|+++++.|.
T Consensus        82 ~id~lv~nAg~   92 (246)
T 3osu_A           82 SLDVLVNNAGI   92 (246)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999998874

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=95.93  E-value=0.023  Score=49.04  Aligned_cols=80  Identities=16%  Similarity=0.130  Sum_probs=49.9

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCC------eEEEEcCChhHHHHHHH-h---Ccc-eEEcCCCCCCccHHHHHHHhh
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRAS------KIIGVDINPEKFEIGKK-F---GIT-DFINPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~------~Vi~~~~~~~~~~~~~~-l---ga~-~v~~~~~~~~~~~~~~i~~~~  251 (371)
                      ++++||+|+ |++|.+.+..+...|+.      +|+++++++++.+.+.+ +   +.. .++..+-.+.+.+.+.+.+..
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            578999998 99999988888778874      78999988877665432 2   322 222211101122222222222


Q ss_pred             --CCCcCEEEECCC
Q 017457          252 --DGGADYCFECIG  263 (371)
Q Consensus       252 --~gg~d~vid~~g  263 (371)
                        -+++|++|++.|
T Consensus        82 ~~~g~id~li~~Ag   95 (244)
T 2bd0_A           82 ERYGHIDCLVNNAG   95 (244)
T ss_dssp             HHTSCCSEEEECCC
T ss_pred             HhCCCCCEEEEcCC
Confidence              137999999887

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=95.91  E-value=0.021  Score=49.85  Aligned_cols=78  Identities=15%  Similarity=0.287  Sum_probs=49.2

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHc--CCCeEEEEcCChhHHHHHHH-hCcce-EE--cCCCCCCccHHHHHHHhhC--CC
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLN--RASKIIGVDINPEKFEIGKK-FGITD-FI--NPATCGDKTVSQVIKEMTD--GG  254 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~--g~~~Vi~~~~~~~~~~~~~~-lga~~-v~--~~~~~~~~~~~~~i~~~~~--gg  254 (371)
                      |+++||+|+ +++|.+.+..+...  |+ +|+.+++++++.+.+.+ ++... .+  |-.+  .++..+.+.+...  ++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~   78 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDT-VVYGVARSEAPLKKLKEKYGDRFFYVVGDITE--DSVLKQLVNAAVKGHGK   78 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSC-EEEEEESCHHHHHHHHHHHGGGEEEEESCTTS--HHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCe-EEEEecCCHHHHHHHHHHhCCceEEEECCCCC--HHHHHHHHHHHHHhcCC
Confidence            578999998 99999877666555  46 89999999888776543 44322 22  2222  1222222222221  37


Q ss_pred             cCEEEECCCC
Q 017457          255 ADYCFECIGL  264 (371)
Q Consensus       255 ~d~vid~~g~  264 (371)
                      +|+++++.|.
T Consensus        79 id~lvnnAg~   88 (254)
T 3kzv_A           79 IDSLVANAGV   88 (254)
T ss_dssp             CCEEEEECCC
T ss_pred             ccEEEECCcc
Confidence            9999998774

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=95.91  E-value=0.022  Score=51.66  Aligned_cols=99  Identities=17%  Similarity=0.111  Sum_probs=62.0

Q ss_pred             CCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh-----C--cceE--EcCCCCCCccHHHHHHHh
Q 017457          181 VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-----G--ITDF--INPATCGDKTVSQVIKEM  250 (371)
Q Consensus       181 ~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l-----g--a~~v--~~~~~~~~~~~~~~i~~~  250 (371)
                      ..++++|||+|+ |.+|...+..+...|+ +|++++++.++.+.+.+.     +  ...+  .|-.+   .+   .+.++
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d---~~---~~~~~   80 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLK---QG---AYDEV   80 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTS---TT---TTTTT
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcC---hH---HHHHH
Confidence            346789999998 9999999998888899 999999988776554332     2  2222  12221   11   12222


Q ss_pred             hCCCcCEEEECCCCh--------------HHHHHHHHHhhc--CCceEEEECc
Q 017457          251 TDGGADYCFECIGLT--------------SVMNDAFNSSRE--GWGKTVILGV  287 (371)
Q Consensus       251 ~~gg~d~vid~~g~~--------------~~~~~~~~~l~~--~~G~~v~~g~  287 (371)
                      .. ++|+||++.+..              .....+++.+.+  +.++++.++.
T Consensus        81 ~~-~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS  132 (342)
T 1y1p_A           81 IK-GAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSS  132 (342)
T ss_dssp             TT-TCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECC
T ss_pred             Hc-CCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEecc
Confidence            22 789999988732              112344444432  2268888875

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=95.91  E-value=0.014  Score=51.88  Aligned_cols=77  Identities=14%  Similarity=0.192  Sum_probs=57.6

Q ss_pred             CCCCCeEEEEcCC-hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEE
Q 017457          181 VEVGSTVAIFGLG-AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCF  259 (371)
Q Consensus       181 ~~~g~~VLI~G~g-~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vi  259 (371)
                      --.|++++|+|.| .+|.-++.++...|+ +|+++.+.                   .   .++.+.++     .+|+||
T Consensus       162 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~hs~-------------------t---~~L~~~~~-----~ADIVI  213 (301)
T 1a4i_A          162 PIAGRHAVVVGRSKIVGAPMHDLLLWNNA-TVTTCHSK-------------------T---AHLDEEVN-----KGDILV  213 (301)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTT-------------------C---SSHHHHHT-----TCSEEE
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHhCCC-eEEEEECC-------------------c---ccHHHHhc-----cCCEEE
Confidence            3579999999997 689999999999999 88888633                   1   23433332     689999


Q ss_pred             ECCCChHHHHHHHHHhhcCCceEEEECcc
Q 017457          260 ECIGLTSVMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       260 d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      .+++.+..+.  -+.++++ ..++++|..
T Consensus       214 ~Avg~p~~I~--~~~vk~G-avVIDVgi~  239 (301)
T 1a4i_A          214 VATGQPEMVK--GEWIKPG-AIVIDCGIN  239 (301)
T ss_dssp             ECCCCTTCBC--GGGSCTT-CEEEECCCB
T ss_pred             ECCCCcccCC--HHHcCCC-cEEEEccCC
Confidence            9999876322  2346787 899999974

>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}

Probab=95.90  E-value=0.11  Score=47.51  Aligned_cols=130  Identities=7%  Similarity=0.044  Sum_probs=81.6

Q ss_pred             eEEEEcCChHHHH-HHHHHHH-cCCCeEE-EEcCChhHHHH-HHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          186 TVAIFGLGAVGLA-VAEGARL-NRASKII-GVDINPEKFEI-GKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       186 ~VLI~G~g~~G~~-ai~la~~-~g~~~Vi-~~~~~~~~~~~-~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      ++.|+|+|.+|.. .+...+. -++ +++ +.++++++.+. ++++|..++++       ++.+.+.+   ..+|+|+-|
T Consensus        25 rigiIG~G~ig~~~~~~~~~~~~~~-~lvav~d~~~~~a~~~a~~~g~~~~y~-------d~~ell~~---~~iDaV~I~   93 (350)
T 4had_A           25 RFGIISTAKIGRDNVVPAIQDAENC-VVTAIASRDLTRAREMADRFSVPHAFG-------SYEEMLAS---DVIDAVYIP   93 (350)
T ss_dssp             EEEEESCCHHHHHTHHHHHHHCSSE-EEEEEECSSHHHHHHHHHHHTCSEEES-------SHHHHHHC---SSCSEEEEC
T ss_pred             EEEEEcChHHHHHHHHHHHHhCCCe-EEEEEECCCHHHHHHHHHHcCCCeeeC-------CHHHHhcC---CCCCEEEEe
Confidence            6899999999975 3444444 477 555 45677776554 56788876652       44443332   279999999


Q ss_pred             CCChHHHHHHHHHhhcCCceEEEECccCCCCceecC-HHHH---hc--CceEEEeeccCCCchhhHHHHHHHHHcCCC
Q 017457          262 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLN-SIEI---LK--GRSVCGTYFGGLKPRSDIATLAQKYLDKEL  333 (371)
Q Consensus       262 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~-~~~~---~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~  333 (371)
                      ++.....+.+..+|..  |.=|++.-+...   +.. ...+   ..  +..+.-.  .+++....++++.+++++|.+
T Consensus        94 tP~~~H~~~~~~al~a--GkhVl~EKPla~---~~~ea~~l~~~a~~~~~~l~v~--~~~R~~p~~~~~k~~i~~G~i  164 (350)
T 4had_A           94 LPTSQHIEWSIKAADA--GKHVVCEKPLAL---KAGDIDAVIAARDRNKVVVTEA--YMITYSPVWQKVRSLIDEGAI  164 (350)
T ss_dssp             SCGGGHHHHHHHHHHT--TCEEEECSCCCS---SGGGGHHHHHHHHHHTCCEEEC--CGGGGSHHHHHHHHHHHTTTT
T ss_pred             CCCchhHHHHHHHHhc--CCEEEEeCCccc---chhhHHHHHHHHHHcCCceeEe--eeeecCHHHHHhhHhhhcCCC
Confidence            9988778889999987  566777643211   111 1112   11  3333322  223334578888899999866

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=95.90  E-value=0.077  Score=48.14  Aligned_cols=132  Identities=10%  Similarity=0.125  Sum_probs=76.1

Q ss_pred             eEEEEcCChHHHHH-H-HHHHHcCCCeEE-EEcCChhHHHH-HHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          186 TVAIFGLGAVGLAV-A-EGARLNRASKII-GVDINPEKFEI-GKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       186 ~VLI~G~g~~G~~a-i-~la~~~g~~~Vi-~~~~~~~~~~~-~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      +|.|+|+|.+|... + .+.+ .+. +++ +.++++++.+. ++++|...++       .++.+.+.   ...+|+|+.+
T Consensus         2 ~vgiiG~G~~g~~~~~~~l~~-~~~-~~vav~d~~~~~~~~~~~~~g~~~~~-------~~~~~~l~---~~~~D~V~i~   69 (332)
T 2glx_A            2 RWGLIGASTIAREWVIGAIRA-TGG-EVVSMMSTSAERGAAYATENGIGKSV-------TSVEELVG---DPDVDAVYVS   69 (332)
T ss_dssp             EEEEESCCHHHHHTHHHHHHH-TTC-EEEEEECSCHHHHHHHHHHTTCSCCB-------SCHHHHHT---CTTCCEEEEC
T ss_pred             eEEEEcccHHHHHhhhHHhhc-CCC-eEEEEECCCHHHHHHHHHHcCCCccc-------CCHHHHhc---CCCCCEEEEe
Confidence            58899999999875 5 4445 777 555 66778877655 4556754222       23332221   1279999999


Q ss_pred             CCChHHHHHHHHHhhcCCceEEEECccCCCCcee-cCHHHHhc--CceEEEeeccCCCchhhHHHHHHHHHcCCC
Q 017457          262 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS-LNSIEILK--GRSVCGTYFGGLKPRSDIATLAQKYLDKEL  333 (371)
Q Consensus       262 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~-~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~  333 (371)
                      ++.....+.+..++..  |.-+.+..+....... .....+..  +..+.-.  ...+....++.+.+++++|.+
T Consensus        70 tp~~~h~~~~~~al~~--Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~~~~~~--~~~r~~p~~~~~~~~i~~g~i  140 (332)
T 2glx_A           70 TTNELHREQTLAAIRA--GKHVLCEKPLAMTLEDAREMVVAAREAGVVLGTN--HHLRNAAAHRAMRDAIAEGRI  140 (332)
T ss_dssp             SCGGGHHHHHHHHHHT--TCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEEC--CCGGGSHHHHHHHHHHHTTTT
T ss_pred             CChhHhHHHHHHHHHC--CCeEEEeCCCcCCHHHHHHHHHHHHHcCCEEEEe--ehhhcCHHHHHHHHHHHcCCC
Confidence            9987767788888876  4545554311110000 00111111  3333322  223334567888889998865

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=95.88  E-value=0.044  Score=50.56  Aligned_cols=49  Identities=24%  Similarity=0.296  Sum_probs=41.7

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHH-HHHhCcc
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEI-GKKFGIT  230 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~-~~~lga~  230 (371)
                      --+|++|+|.|.|.+|..+++.+...|+ +|++.+++.++.+. ++++|++
T Consensus       170 ~L~GktV~V~G~G~VG~~~A~~L~~~Ga-kVvv~D~~~~~l~~~a~~~ga~  219 (364)
T 1leh_A          170 SLEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGAD  219 (364)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCCE
T ss_pred             CCCcCEEEEECchHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE
Confidence            3578999999999999999999999999 89999999888764 4446654

>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}

Probab=95.88  E-value=0.039  Score=47.45  Aligned_cols=95  Identities=16%  Similarity=0.134  Sum_probs=65.2

Q ss_pred             CCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEE
Q 017457          180 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCF  259 (371)
Q Consensus       180 ~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vi  259 (371)
                      .++++++||=+|+|. |..+..+++. |. +|++++.+++..+.+++. . .++.      .+..+.+..+..+.+|+|+
T Consensus        38 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~gvD~s~~~~~~a~~~-~-~~~~------~d~~~~~~~~~~~~fD~i~  106 (240)
T 3dli_A           38 YFKGCRRVLDIGCGR-GEFLELCKEE-GI-ESIGVDINEDMIKFCEGK-F-NVVK------SDAIEYLKSLPDKYLDGVM  106 (240)
T ss_dssp             GTTTCSCEEEETCTT-THHHHHHHHH-TC-CEEEECSCHHHHHHHHTT-S-EEEC------SCHHHHHHTSCTTCBSEEE
T ss_pred             hhcCCCeEEEEeCCC-CHHHHHHHhC-CC-cEEEEECCHHHHHHHHhh-c-ceee------ccHHHHhhhcCCCCeeEEE
Confidence            367889999999864 5556666665 88 899999999988888775 2 2322      2333333333445899998


Q ss_pred             ECC-----CC---hHHHHHHHHHhhcCCceEEEEC
Q 017457          260 ECI-----GL---TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       260 d~~-----g~---~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      ...     ..   ...++.+.+.|+++ |.++...
T Consensus       107 ~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~  140 (240)
T 3dli_A          107 ISHFVEHLDPERLFELLSLCYSKMKYS-SYIVIES  140 (240)
T ss_dssp             EESCGGGSCGGGHHHHHHHHHHHBCTT-CCEEEEE
T ss_pred             ECCchhhCCcHHHHHHHHHHHHHcCCC-cEEEEEe
Confidence            532     22   24578889999998 9987654

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=95.87  E-value=0.0097  Score=52.07  Aligned_cols=74  Identities=20%  Similarity=0.194  Sum_probs=47.7

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceE-EcCCCCCCccHHHHHHHhh--CCCcCEE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMT--DGGADYC  258 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~--~gg~d~v  258 (371)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.     +..+ .|-.+  .++..+.+.+..  -+.+|++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~-----~~~~~~Dl~d--~~~v~~~~~~~~~~~g~iD~l   91 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGD-KVAITYRSGEPPEG-----FLAVKCDITD--TEQVEQAYKEIEETHGPVEVL   91 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTT-----SEEEECCTTS--HHHHHHHHHHHHHHTCSCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHhhcc-----ceEEEecCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence            4689999998 9999999998888999 89999887654322     1111 23222  122222222222  2378999


Q ss_pred             EECCCC
Q 017457          259 FECIGL  264 (371)
Q Consensus       259 id~~g~  264 (371)
                      +++.|.
T Consensus        92 v~nAg~   97 (253)
T 2nm0_A           92 IANAGV   97 (253)
T ss_dssp             EEECSC
T ss_pred             EECCCC
Confidence            988763

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=95.86  E-value=0.022  Score=49.89  Aligned_cols=78  Identities=14%  Similarity=0.176  Sum_probs=48.6

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC-hhHHHHHHH----hCcc-eEE--cCCCCCCccHHHHHHHhhC-
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN-PEKFEIGKK----FGIT-DFI--NPATCGDKTVSQVIKEMTD-  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~-~~~~~~~~~----lga~-~v~--~~~~~~~~~~~~~i~~~~~-  252 (371)
                      .++++||+|+ |++|.+.++.+...|+ +|++++++ ++..+.+++    .+.. .++  |-.+  .++..+.+.+... 
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~   82 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGY-SVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTK--KEDLHKIVEEAMSH   82 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTS--HHHHHHHHHHHHHH
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHH
Confidence            4688999998 9999999988888999 88888544 444444433    2222 222  2222  1223333333222 


Q ss_pred             -CCcCEEEECCC
Q 017457          253 -GGADYCFECIG  263 (371)
Q Consensus       253 -gg~d~vid~~g  263 (371)
                       +++|++|++.|
T Consensus        83 ~g~id~lv~~Ag   94 (264)
T 3i4f_A           83 FGKIDFLINNAG   94 (264)
T ss_dssp             HSCCCEEECCCC
T ss_pred             hCCCCEEEECCc
Confidence             37999999988

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=95.86  E-value=0.024  Score=50.30  Aligned_cols=78  Identities=18%  Similarity=0.247  Sum_probs=48.8

Q ss_pred             CCCeEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChh---HHHHHHH-hCcceEE--cCCCCCCccHHHHHHHhh--
Q 017457          183 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINPE---KFEIGKK-FGITDFI--NPATCGDKTVSQVIKEMT--  251 (371)
Q Consensus       183 ~g~~VLI~G~---g~~G~~ai~la~~~g~~~Vi~~~~~~~---~~~~~~~-lga~~v~--~~~~~~~~~~~~~i~~~~--  251 (371)
                      .++++||+|+   |++|.+.+..+...|+ +|++++++++   ..+.+.+ .+...++  |-.+  .++..+.+.+..  
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~   96 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGA-QLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSL--DEDIKNLKKFLEEN   96 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            5789999985   6999999988888899 8999988875   2333322 2322222  3222  122222222222  


Q ss_pred             CCCcCEEEECCC
Q 017457          252 DGGADYCFECIG  263 (371)
Q Consensus       252 ~gg~d~vid~~g  263 (371)
                      -+++|+++++.|
T Consensus        97 ~g~iD~lv~~Ag  108 (285)
T 2p91_A           97 WGSLDIIVHSIA  108 (285)
T ss_dssp             TSCCCEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence            137999999887

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=95.85  E-value=0.017  Score=52.62  Aligned_cols=89  Identities=19%  Similarity=0.284  Sum_probs=61.6

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  262 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~  262 (371)
                      .|++|.|+|.|.+|...++.++..|. +|++.+++..+.+...++|+..         .++.+.+.     ..|+|+.++
T Consensus       144 ~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~---------~~l~ell~-----~aDvV~l~~  208 (330)
T 4e5n_A          144 DNATVGFLGMGAIGLAMADRLQGWGA-TLQYHEAKALDTQTEQRLGLRQ---------VACSELFA-----SSDFILLAL  208 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHTTTSCC-EEEEECSSCCCHHHHHHHTEEE---------CCHHHHHH-----HCSEEEECC
T ss_pred             CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCCCcHhHHHhcCcee---------CCHHHHHh-----hCCEEEEcC
Confidence            57899999999999999999999999 9999998875556666666532         12222222     367777766


Q ss_pred             CChH----H-HHHHHHHhhcCCceEEEECc
Q 017457          263 GLTS----V-MNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       263 g~~~----~-~~~~~~~l~~~~G~~v~~g~  287 (371)
                      +...    . -...+..|+++ ..++.++.
T Consensus       209 P~t~~t~~li~~~~l~~mk~g-ailIN~ar  237 (330)
T 4e5n_A          209 PLNADTLHLVNAELLALVRPG-ALLVNPCR  237 (330)
T ss_dssp             CCSTTTTTCBCHHHHTTSCTT-EEEEECSC
T ss_pred             CCCHHHHHHhCHHHHhhCCCC-cEEEECCC
Confidence            6321    1 13566677776 77777763

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=95.84  E-value=0.021  Score=48.64  Aligned_cols=105  Identities=15%  Similarity=0.173  Sum_probs=68.4

Q ss_pred             HcCCCCCCeEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHHHHHHhhC
Q 017457          178 VAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       178 ~~~~~~g~~VLI~G~g~~G~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~~~  252 (371)
                      .....++++||-+|+|. |..++.+++.++ ..+|++++.+++..+.+++    .|...-+....   .+..+.+..+..
T Consensus        59 l~~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~~~~~~~~  134 (225)
T 3tr6_A           59 LVKLMQAKKVIDIGTFT-GYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRL---SPAKDTLAELIH  134 (225)
T ss_dssp             HHHHHTCSEEEEECCTT-SHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE---SCHHHHHHHHHT
T ss_pred             HHHhhCCCEEEEeCCcc-hHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe---CCHHHHHHHhhh
Confidence            34456788999999876 788888888763 3399999999988777655    34321011111   234344444332


Q ss_pred             ----CCcCEEEECCCC---hHHHHHHHHHhhcCCceEEEECc
Q 017457          253 ----GGADYCFECIGL---TSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       253 ----gg~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                          +.||+|+-....   ...++.+.+.|+++ |.++.-..
T Consensus       135 ~~~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~~~  175 (225)
T 3tr6_A          135 AGQAWQYDLIYIDADKANTDLYYEESLKLLREG-GLIAVDNV  175 (225)
T ss_dssp             TTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEECS
T ss_pred             ccCCCCccEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEeCC
Confidence                479999843332   23468888999998 99887543

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=95.82  E-value=0.11  Score=46.59  Aligned_cols=89  Identities=13%  Similarity=0.088  Sum_probs=63.6

Q ss_pred             CCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCC
Q 017457          184 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG  263 (371)
Q Consensus       184 g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g  263 (371)
                      ..+|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|+...        .+..+.+.     ..|+||-+++
T Consensus         9 ~~~IgiIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~--------~~~~e~~~-----~aDvVi~~vp   74 (306)
T 3l6d_A            9 EFDVSVIGLGAMGTIMAQVLLKQGK-RVAIWNRSPGKAAALVAAGAHLC--------ESVKAALS-----ASPATIFVLL   74 (306)
T ss_dssp             SCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTCEEC--------SSHHHHHH-----HSSEEEECCS
T ss_pred             CCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeec--------CCHHHHHh-----cCCEEEEEeC
Confidence            4679999999999998888888999 89999999999988887775321        23333333     3789999988


Q ss_pred             ChHHHHHHH-----HHhhcCCceEEEECc
Q 017457          264 LTSVMNDAF-----NSSREGWGKTVILGV  287 (371)
Q Consensus       264 ~~~~~~~~~-----~~l~~~~G~~v~~g~  287 (371)
                      .+......+     ..+.++ ..++.++.
T Consensus        75 ~~~~~~~v~~~~~l~~~~~g-~ivid~st  102 (306)
T 3l6d_A           75 DNHATHEVLGMPGVARALAH-RTIVDYTT  102 (306)
T ss_dssp             SHHHHHHHHTSTTHHHHTTT-CEEEECCC
T ss_pred             CHHHHHHHhcccchhhccCC-CEEEECCC
Confidence            765344433     234554 56666654

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=95.80  E-value=0.035  Score=50.01  Aligned_cols=96  Identities=15%  Similarity=0.219  Sum_probs=66.6

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc---eEEcCCCCCCccHHHHHHHhhCC
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIKEMTDG  253 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~---~v~~~~~~~~~~~~~~i~~~~~g  253 (371)
                      ++++++||-+|+|. |..+..+++..|. +|++++.+++..+.+++    .|..   .++..+-   .++     .+..+
T Consensus       115 ~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~-----~~~~~  184 (312)
T 3vc1_A          115 AGPDDTLVDAGCGR-GGSMVMAHRRFGS-RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNM---LDT-----PFDKG  184 (312)
T ss_dssp             CCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT---TSC-----CCCTT
T ss_pred             CCCCCEEEEecCCC-CHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECCh---hcC-----CCCCC
Confidence            78899999999875 7788888887788 99999999988877765    3321   2222211   111     01224


Q ss_pred             CcCEEEEC-----CCChHHHHHHHHHhhcCCceEEEECc
Q 017457          254 GADYCFEC-----IGLTSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       254 g~d~vid~-----~g~~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      .||+|+..     .+-...+..+.+.|+++ |+++....
T Consensus       185 ~fD~V~~~~~l~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  222 (312)
T 3vc1_A          185 AVTASWNNESTMYVDLHDLFSEHSRFLKVG-GRYVTITG  222 (312)
T ss_dssp             CEEEEEEESCGGGSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CEeEEEECCchhhCCHHHHHHHHHHHcCCC-cEEEEEEc
Confidence            89999853     22244588999999998 99887754

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=95.79  E-value=0.031  Score=47.72  Aligned_cols=100  Identities=17%  Similarity=0.192  Sum_probs=68.3

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCc----ceEEcCCCCCCccHHHHHHHh
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI----TDFINPATCGDKTVSQVIKEM  250 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga----~~v~~~~~~~~~~~~~~i~~~  250 (371)
                      +.....+.++++||-+|+|. |..+..+++.. . +|++++.+++..+.+++...    -.++..+      ..+..  .
T Consensus        62 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~-~-~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d------~~~~~--~  130 (231)
T 1vbf_A           62 MLDELDLHKGQKVLEIGTGI-GYYTALIAEIV-D-KVVSVEINEKMYNYASKLLSYYNNIKLILGD------GTLGY--E  130 (231)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHS-S-EEEEEESCHHHHHHHHHHHTTCSSEEEEESC------GGGCC--G
T ss_pred             HHHhcCCCCCCEEEEEcCCC-CHHHHHHHHHc-C-EEEEEeCCHHHHHHHHHHHhhcCCeEEEECC------ccccc--c
Confidence            34456778999999999976 88888888764 5 99999999998888876421    1222221      11100  0


Q ss_pred             hCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEEC
Q 017457          251 TDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       251 ~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      ..+.+|+|+....-......+.+.|+++ |+++..-
T Consensus       131 ~~~~fD~v~~~~~~~~~~~~~~~~L~pg-G~l~~~~  165 (231)
T 1vbf_A          131 EEKPYDRVVVWATAPTLLCKPYEQLKEG-GIMILPI  165 (231)
T ss_dssp             GGCCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEEE
T ss_pred             cCCCccEEEECCcHHHHHHHHHHHcCCC-cEEEEEE
Confidence            1237999997655444457788999998 9887764

>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*

Probab=95.79  E-value=0.12  Score=47.44  Aligned_cols=134  Identities=14%  Similarity=0.158  Sum_probs=81.2

Q ss_pred             CeEEEEcCChHHHHHHHHHHHc--CCCeEE-EEcCChhHHHH-HHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          185 STVAIFGLGAVGLAVAEGARLN--RASKII-GVDINPEKFEI-GKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la~~~--g~~~Vi-~~~~~~~~~~~-~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      -+|.|+|+|.+|...+...+..  ++ +++ +.++++++.+. ++++|+ .++       .++.+.+.+   ..+|+|+.
T Consensus        14 ~rvgiiG~G~~g~~~~~~l~~~~~~~-~lvav~d~~~~~~~~~~~~~~~-~~~-------~~~~~ll~~---~~~D~V~i   81 (354)
T 3q2i_A           14 IRFALVGCGRIANNHFGALEKHADRA-ELIDVCDIDPAALKAAVERTGA-RGH-------ASLTDMLAQ---TDADIVIL   81 (354)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTTTTE-EEEEEECSSHHHHHHHHHHHCC-EEE-------SCHHHHHHH---CCCSEEEE
T ss_pred             ceEEEEcCcHHHHHHHHHHHhCCCCe-EEEEEEcCCHHHHHHHHHHcCC-cee-------CCHHHHhcC---CCCCEEEE
Confidence            4789999999998877766655  67 544 66778877665 455776 343       244444432   27999999


Q ss_pred             CCCChHHHHHHHHHhhcCCceEEEECccCCCCcee-cCHHHHhc--CceEEEeeccCCCchhhHHHHHHHHHcCCCC
Q 017457          261 CIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS-LNSIEILK--GRSVCGTYFGGLKPRSDIATLAQKYLDKELN  334 (371)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~-~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~  334 (371)
                      |++.....+.+..++..  |.-+++..+....... ........  +..+.-.  .+.+....++++.+++++|.+-
T Consensus        82 ~tp~~~h~~~~~~al~~--gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~--~~~r~~p~~~~~k~~i~~g~iG  154 (354)
T 3q2i_A           82 TTPSGLHPTQSIECSEA--GFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVV--KQNRRNATLQLLKRAMQEKRFG  154 (354)
T ss_dssp             CSCGGGHHHHHHHHHHT--TCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEEC--CGGGGSHHHHHHHHHHHTTTTC
T ss_pred             CCCcHHHHHHHHHHHHC--CCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEE--EcccCCHHHHHHHHHHhcCCCC
Confidence            99988767888888877  4556665321111000 00111111  3434322  2223345688888999998663

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=95.79  E-value=0.022  Score=50.35  Aligned_cols=99  Identities=11%  Similarity=0.058  Sum_probs=67.5

Q ss_pred             HHHcCCCCCCeEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCChhHHHHHHHh-----Ccc--eEEcCCCCCCccHHHH
Q 017457          176 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLN--RASKIIGVDINPEKFEIGKKF-----GIT--DFINPATCGDKTVSQV  246 (371)
Q Consensus       176 ~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~--g~~~Vi~~~~~~~~~~~~~~l-----ga~--~v~~~~~~~~~~~~~~  246 (371)
                      .....+.++++||-+|+|. |..+..+++..  +. +|++++.+++..+.+++.     |.+  .++..+-   .+    
T Consensus       103 ~~~~~~~~~~~VLD~G~G~-G~~~~~la~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~---~~----  173 (275)
T 1yb2_A          103 IMRCGLRPGMDILEVGVGS-GNMSSYILYALNGKG-TLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDI---AD----  173 (275)
T ss_dssp             ---CCCCTTCEEEEECCTT-SHHHHHHHHHHTTSS-EEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCT---TT----
T ss_pred             HHHcCCCCcCEEEEecCCC-CHHHHHHHHHcCCCC-EEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECch---hc----
Confidence            3456788999999999874 77778888873  45 999999999988877653     532  2222211   11    


Q ss_pred             HHHhhCCCcCEEEECCCCh-HHHHHHHHHhhcCCceEEEEC
Q 017457          247 IKEMTDGGADYCFECIGLT-SVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       247 i~~~~~gg~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g  286 (371)
                        .+..+.+|+|+...... ..++.+.+.|+++ |.++...
T Consensus       174 --~~~~~~fD~Vi~~~~~~~~~l~~~~~~Lkpg-G~l~i~~  211 (275)
T 1yb2_A          174 --FISDQMYDAVIADIPDPWNHVQKIASMMKPG-SVATFYL  211 (275)
T ss_dssp             --CCCSCCEEEEEECCSCGGGSHHHHHHTEEEE-EEEEEEE
T ss_pred             --cCcCCCccEEEEcCcCHHHHHHHHHHHcCCC-CEEEEEe
Confidence              11223799999755543 4578999999998 9988775

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=95.77  E-value=0.051  Score=48.32  Aligned_cols=73  Identities=16%  Similarity=0.184  Sum_probs=53.0

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCCh
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT  265 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~~  265 (371)
                      +|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|+...        .+..+.+.     ..|+||-++..+
T Consensus         3 ~I~iiG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~--------~~~~~~~~-----~advvi~~v~~~   68 (287)
T 3pdu_A            3 TYGFLGLGIMGGPMAANLVRAGF-DVTVWNRNPAKCAPLVALGARQA--------SSPAEVCA-----ACDITIAMLADP   68 (287)
T ss_dssp             CEEEECCSTTHHHHHHHHHHHTC-CEEEECSSGGGGHHHHHHTCEEC--------SCHHHHHH-----HCSEEEECCSSH
T ss_pred             eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec--------CCHHHHHH-----cCCEEEEEcCCH
Confidence            68899999999988888777898 89999999999888877775321        22333332     368888888876


Q ss_pred             HHHHHHH
Q 017457          266 SVMNDAF  272 (371)
Q Consensus       266 ~~~~~~~  272 (371)
                      ......+
T Consensus        69 ~~~~~v~   75 (287)
T 3pdu_A           69 AAAREVC   75 (287)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            4355444

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=95.77  E-value=0.016  Score=50.89  Aligned_cols=92  Identities=12%  Similarity=0.154  Sum_probs=64.5

Q ss_pred             cccchhhhHHHHHHHcCCCCCCeEEEEcCC-hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457          164 LSCGVSTGVGAAWKVAGVEVGSTVAIFGLG-AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT  242 (371)
Q Consensus       164 ~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g-~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~  242 (371)
                      +||+.......+ +..+ -.|++++|+|.| .+|..++.++...|+ +|+++.+..                      .+
T Consensus       132 ~PcTp~gv~~lL-~~~~-l~Gk~vvVvG~s~iVG~plA~lL~~~gA-tVtv~~~~t----------------------~~  186 (276)
T 3ngx_A          132 VPATPRAVIDIM-DYYG-YHENTVTIVNRSPVVGRPLSMMLLNRNY-TVSVCHSKT----------------------KD  186 (276)
T ss_dssp             CCHHHHHHHHHH-HHHT-CCSCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC----------------------SC
T ss_pred             CCCcHHHHHHHH-HHhC-cCCCEEEEEcCChHHHHHHHHHHHHCCC-eEEEEeCCc----------------------cc
Confidence            444444444433 3344 789999999985 689999999999999 898886421                      24


Q ss_pred             HHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECcc
Q 017457          243 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       243 ~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      +.+.++     .+|++|.++|.+..+..  +.++++ ..++++|..
T Consensus       187 L~~~~~-----~ADIVI~Avg~p~~I~~--~~vk~G-avVIDvgi~  224 (276)
T 3ngx_A          187 IGSMTR-----SSKIVVVAVGRPGFLNR--EMVTPG-SVVIDVGIN  224 (276)
T ss_dssp             HHHHHH-----HSSEEEECSSCTTCBCG--GGCCTT-CEEEECCCE
T ss_pred             HHHhhc-----cCCEEEECCCCCccccH--hhccCC-cEEEEeccC
Confidence            444443     47999999998653322  346886 889999874

>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}

Probab=95.77  E-value=0.09  Score=48.70  Aligned_cols=133  Identities=14%  Similarity=0.076  Sum_probs=80.2

Q ss_pred             CeEEEEcCChHHHHHHHHHHH--------cCCCeEEEEcCChhHHHH-HHHhCcceEEcCCCCCCccHHHHHHHhhCCCc
Q 017457          185 STVAIFGLGAVGLAVAEGARL--------NRASKIIGVDINPEKFEI-GKKFGITDFINPATCGDKTVSQVIKEMTDGGA  255 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la~~--------~g~~~Vi~~~~~~~~~~~-~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~  255 (371)
                      =+|.|+|+|.+|...+...+.        -+++-|-+.++++++.+. ++++|...++       .++.+.+.+   ..+
T Consensus        26 irvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y-------~d~~ell~~---~~i   95 (393)
T 4fb5_A           26 LGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKAT-------ADWRALIAD---PEV   95 (393)
T ss_dssp             CEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEE-------SCHHHHHHC---TTC
T ss_pred             ccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeec-------CCHHHHhcC---CCC
Confidence            378999999999865543332        256234455667766554 5668887665       244444332   279


Q ss_pred             CEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecC-HHHH---hc--CceEEEeeccCCCchhhHHHHHHHHH
Q 017457          256 DYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLN-SIEI---LK--GRSVCGTYFGGLKPRSDIATLAQKYL  329 (371)
Q Consensus       256 d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~-~~~~---~~--~~~~~g~~~~~~~~~~~~~~~~~~~~  329 (371)
                      |+|+-|++.....+.+..+|..  |.=|++.-+...   ++. ...+   ..  +..+.-.  .+++....++++.++++
T Consensus        96 DaV~IatP~~~H~~~a~~al~a--GkhVl~EKPla~---~~~ea~~l~~~a~~~g~~l~vg--~~~R~~p~~~~~k~~i~  168 (393)
T 4fb5_A           96 DVVSVTTPNQFHAEMAIAALEA--GKHVWCEKPMAP---AYADAERMLATAERSGKVAALG--YNYIQNPVMRHIRKLVG  168 (393)
T ss_dssp             CEEEECSCGGGHHHHHHHHHHT--TCEEEECSCSCS---SHHHHHHHHHHHHHSSSCEEEC--CGGGGCHHHHHHHHHHH
T ss_pred             cEEEECCChHHHHHHHHHHHhc--CCeEEEccCCcc---cHHHHHHhhhhHHhcCCccccc--cccccChHHHHHHHHHH
Confidence            9999999988878999999987  566777642211   111 1112   11  3333322  23333467888999999


Q ss_pred             cCCCC
Q 017457          330 DKELN  334 (371)
Q Consensus       330 ~g~~~  334 (371)
                      +|++-
T Consensus       169 ~G~iG  173 (393)
T 4fb5_A          169 DGVIG  173 (393)
T ss_dssp             TTTTC
T ss_pred             cCCCc
Confidence            98664

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=95.76  E-value=0.0089  Score=52.12  Aligned_cols=91  Identities=21%  Similarity=0.290  Sum_probs=56.4

Q ss_pred             CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhh---CCCcCEEEE
Q 017457          185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMT---DGGADYCFE  260 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~---~gg~d~vid  260 (371)
                      +++||+|+ |++|.+.++.+...|+ +|+++++++++.+.      ....|-      .-.+.+.++.   .+++|++++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~------~~~~Dl------~~~~~v~~~~~~~~~~id~lv~   68 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDAEVIA------DLSTAE------GRKQAIADVLAKCSKGMDGLVL   68 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSSEEC------CTTSHH------HHHHHHHHHHTTCTTCCSEEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhhcc------ccccCC------CCHHHHHHHHHHhCCCCCEEEE
Confidence            47999998 9999999998888999 89999887654211      000010      0111222222   247899999


Q ss_pred             CCCChH------------------HHHHHHHHhhcC-CceEEEECcc
Q 017457          261 CIGLTS------------------VMNDAFNSSREG-WGKTVILGVE  288 (371)
Q Consensus       261 ~~g~~~------------------~~~~~~~~l~~~-~G~~v~~g~~  288 (371)
                      +.|...                  ..+.+++.+... .|+++.++..
T Consensus        69 ~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~  115 (257)
T 1fjh_A           69 CAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSV  115 (257)
T ss_dssp             CCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCG
T ss_pred             CCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECCh
Confidence            887422                  134455555432 2789988763

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=95.76  E-value=0.07  Score=48.78  Aligned_cols=91  Identities=10%  Similarity=0.158  Sum_probs=64.4

Q ss_pred             CeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCC
Q 017457          185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL  264 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~  264 (371)
                      .+|.|+|.|.+|.+.+..++..|. +|++.++++++.+.+.++|+...        .+..+.+.+.. .+.|+||-+++.
T Consensus         9 ~kIgIIG~G~mG~slA~~L~~~G~-~V~~~dr~~~~~~~a~~~G~~~~--------~~~~e~~~~a~-~~aDlVilavP~   78 (341)
T 3ktd_A            9 RPVCILGLGLIGGSLLRDLHAANH-SVFGYNRSRSGAKSAVDEGFDVS--------ADLEATLQRAA-AEDALIVLAVPM   78 (341)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHTTCCEE--------SCHHHHHHHHH-HTTCEEEECSCH
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeee--------CCHHHHHHhcc-cCCCEEEEeCCH
Confidence            579999999999999999988998 89999999999999988887432        23333333211 157999999996


Q ss_pred             hHHHHHHHHH---hhcCCceEEEECc
Q 017457          265 TSVMNDAFNS---SREGWGKTVILGV  287 (371)
Q Consensus       265 ~~~~~~~~~~---l~~~~G~~v~~g~  287 (371)
                      .. ....++.   ++++ ..+++++.
T Consensus        79 ~~-~~~vl~~l~~~~~~-~iv~Dv~S  102 (341)
T 3ktd_A           79 TA-IDSLLDAVHTHAPN-NGFTDVVS  102 (341)
T ss_dssp             HH-HHHHHHHHHHHCTT-CCEEECCS
T ss_pred             HH-HHHHHHHHHccCCC-CEEEEcCC
Confidence            54 4443333   3444 56666654

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=95.76  E-value=0.071  Score=50.76  Aligned_cols=95  Identities=13%  Similarity=-0.009  Sum_probs=58.8

Q ss_pred             CCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457          184 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  262 (371)
Q Consensus       184 g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~  262 (371)
                      +++|+|+|+|.+|.+.+..+...|+ +|++++++.++.+.+.+ ++....+..+-   .+. +.+.++.. ++|+|++++
T Consensus         3 ~k~VlViGaG~iG~~ia~~L~~~G~-~V~v~~R~~~~a~~la~~~~~~~~~~~Dv---~d~-~~l~~~l~-~~DvVIn~a   76 (450)
T 1ff9_A            3 TKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPISLDV---NDD-AALDAEVA-KHDLVISLI   76 (450)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESSHHHHHHTTTTCTTEEEEECCT---TCH-HHHHHHHT-TSSEEEECC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCcC-EEEEEECCHHHHHHHHHhcCCceEEEeec---CCH-HHHHHHHc-CCcEEEECC
Confidence            5789999999999998888888898 89999998877665433 33111221111   122 22333333 799999999


Q ss_pred             CChHHHHHHHHHhhcCCceEEEE
Q 017457          263 GLTSVMNDAFNSSREGWGKTVIL  285 (371)
Q Consensus       263 g~~~~~~~~~~~l~~~~G~~v~~  285 (371)
                      +..........++.++ -.++..
T Consensus        77 ~~~~~~~i~~a~l~~g-~~vvd~   98 (450)
T 1ff9_A           77 PYTFHATVIKSAIRQK-KHVVTT   98 (450)
T ss_dssp             C--CHHHHHHHHHHHT-CEEEES
T ss_pred             ccccchHHHHHHHhCC-CeEEEe
Confidence            8643233344556664 455544

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=95.75  E-value=0.035  Score=45.47  Aligned_cols=98  Identities=14%  Similarity=0.195  Sum_probs=67.2

Q ss_pred             HHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCc-c--eEEcCCCCCCccHHHHHH
Q 017457          176 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI-T--DFINPATCGDKTVSQVIK  248 (371)
Q Consensus       176 ~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga-~--~v~~~~~~~~~~~~~~i~  248 (371)
                      .....+.++++||-+|+|. |..+..+++.. . +|++++.+++..+.+++    .+. +  .++.      .++.+.  
T Consensus        26 ~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~-~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~------~d~~~~--   94 (192)
T 1l3i_A           26 MCLAEPGKNDVAVDVGCGT-GGVTLELAGRV-R-RVYAIDRNPEAISTTEMNLQRHGLGDNVTLME------GDAPEA--   94 (192)
T ss_dssp             HHHHCCCTTCEEEEESCTT-SHHHHHHHTTS-S-EEEEEESCHHHHHHHHHHHHHTTCCTTEEEEE------SCHHHH--
T ss_pred             HHhcCCCCCCEEEEECCCC-CHHHHHHHHhc-C-EEEEEECCHHHHHHHHHHHHHcCCCcceEEEe------cCHHHh--
Confidence            3455788999999999877 88888888766 5 99999999988877765    333 1  1221      233332  


Q ss_pred             HhhC-CCcCEEEECCCC---hHHHHHHHHHhhcCCceEEEEC
Q 017457          249 EMTD-GGADYCFECIGL---TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       249 ~~~~-gg~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                       +.. +.+|+|+.....   ...+..+.+.|+++ |.++...
T Consensus        95 -~~~~~~~D~v~~~~~~~~~~~~l~~~~~~l~~g-G~l~~~~  134 (192)
T 1l3i_A           95 -LCKIPDIDIAVVGGSGGELQEILRIIKDKLKPG-GRIIVTA  134 (192)
T ss_dssp             -HTTSCCEEEEEESCCTTCHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             -cccCCCCCEEEECCchHHHHHHHHHHHHhcCCC-cEEEEEe
Confidence             222 379999965431   33477888889997 9887654

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=95.74  E-value=0.024  Score=50.06  Aligned_cols=78  Identities=10%  Similarity=0.174  Sum_probs=49.0

Q ss_pred             CCCeEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChh---HHHHHHH-hCcceEE--cCCCCCCccHHHHHHHhh--
Q 017457          183 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINPE---KFEIGKK-FGITDFI--NPATCGDKTVSQVIKEMT--  251 (371)
Q Consensus       183 ~g~~VLI~G~---g~~G~~ai~la~~~g~~~Vi~~~~~~~---~~~~~~~-lga~~v~--~~~~~~~~~~~~~i~~~~--  251 (371)
                      .++++||+|+   |++|.+.++.+...|+ +|++++++++   ..+.+.+ .+...++  |-.+  .++..+.+.+..  
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~   81 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSK--EEHFKSLYNSVKKD   81 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            4789999985   6999999998888899 8999988765   3333332 3422222  3222  122222222222  


Q ss_pred             CCCcCEEEECCC
Q 017457          252 DGGADYCFECIG  263 (371)
Q Consensus       252 ~gg~d~vid~~g  263 (371)
                      -+++|+++++.|
T Consensus        82 ~g~id~lv~nAg   93 (275)
T 2pd4_A           82 LGSLDFIVHSVA   93 (275)
T ss_dssp             TSCEEEEEECCC
T ss_pred             cCCCCEEEECCc
Confidence            137899999887

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=95.73  E-value=0.021  Score=49.38  Aligned_cols=38  Identities=18%  Similarity=0.306  Sum_probs=32.8

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK  220 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~  220 (371)
                      .+++++||+|+ |++|.+.+..+...|+ +|+++++++++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~   43 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENE   43 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCChhh
Confidence            45789999998 9999999999888999 89999987655

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=95.71  E-value=0.026  Score=49.94  Aligned_cols=94  Identities=15%  Similarity=0.171  Sum_probs=63.9

Q ss_pred             cccchhhhHHHHHHHcCCCCCCeEEEEcCC-hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457          164 LSCGVSTGVGAAWKVAGVEVGSTVAIFGLG-AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT  242 (371)
Q Consensus       164 ~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g-~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~  242 (371)
                      +||+.......+.+..---.|++++|+|.| .+|.-+++++...|+ +|+++.+..                      .+
T Consensus       139 ~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~hs~t----------------------~~  195 (288)
T 1b0a_A          139 RPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGC-TTTVTHRFT----------------------KN  195 (288)
T ss_dssp             CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTC-EEEEECSSC----------------------SC
T ss_pred             CCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHCCC-eEEEEeCCc----------------------hh
Confidence            444444333333232334579999999996 579999999999999 888886332                      24


Q ss_pred             HHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECcc
Q 017457          243 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       243 ~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      +.+.++     .+|+||.++|.+..+..  +.++++ ..++++|..
T Consensus       196 L~~~~~-----~ADIVI~Avg~p~lI~~--~~vk~G-avVIDVgi~  233 (288)
T 1b0a_A          196 LRHHVE-----NADLLIVAVGKPGFIPG--DWIKEG-AIVIDVGIN  233 (288)
T ss_dssp             HHHHHH-----HCSEEEECSCCTTCBCT--TTSCTT-CEEEECCCE
T ss_pred             HHHHhc-----cCCEEEECCCCcCcCCH--HHcCCC-cEEEEccCC
Confidence            444444     48999999998762222  236786 899999874

>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*

Probab=95.70  E-value=0.045  Score=49.22  Aligned_cols=98  Identities=18%  Similarity=0.109  Sum_probs=64.0

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhC--------c--ceEEcCCCCCCccHHHHHHHh
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG--------I--TDFINPATCGDKTVSQVIKEM  250 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lg--------a--~~v~~~~~~~~~~~~~~i~~~  250 (371)
                      ..++++||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-        .  -.++.      .+..+.+...
T Consensus        93 ~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~------~D~~~~~~~~  165 (304)
T 3bwc_A           93 HPKPERVLIIGGGD-GGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRV------GDGLAFVRQT  165 (304)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE------SCHHHHHHSS
T ss_pred             CCCCCeEEEEcCCC-CHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEE------CcHHHHHHhc
Confidence            36778999998865 666777777655449999999998877776522        1  12221      2343333322


Q ss_pred             hCCCcCEEEE-CCCC---------hHHHHHHHHHhhcCCceEEEEC
Q 017457          251 TDGGADYCFE-CIGL---------TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       251 ~~gg~d~vid-~~g~---------~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      ..+.+|+|+. ....         ...++.+.+.|+++ |.++...
T Consensus       166 ~~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~  210 (304)
T 3bwc_A          166 PDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPD-GICCNQG  210 (304)
T ss_dssp             CTTCEEEEEEECC---------CCHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             cCCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCC-cEEEEec
Confidence            2348999984 3211         24478889999998 9988764

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=95.69  E-value=0.016  Score=49.66  Aligned_cols=100  Identities=13%  Similarity=0.126  Sum_probs=67.0

Q ss_pred             cCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCc--c--eEEcCCCCCCccHHHHHHHhhCCC
Q 017457          179 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI--T--DFINPATCGDKTVSQVIKEMTDGG  254 (371)
Q Consensus       179 ~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga--~--~v~~~~~~~~~~~~~~i~~~~~gg  254 (371)
                      ..+.++++||-+|+|. |..+..+++..|..+|++++.+++..+.+++.-.  .  .++..+-   .+... .... .+.
T Consensus        70 ~~~~~~~~VLDlGcG~-G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~---~~~~~-~~~~-~~~  143 (230)
T 1fbn_A           70 MPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDA---NKPQE-YANI-VEK  143 (230)
T ss_dssp             CCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCT---TCGGG-GTTT-SCC
T ss_pred             cCCCCCCEEEEEcccC-CHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCC---CCccc-cccc-Ccc
Confidence            4567899999999977 8888889988774499999999988877655321  1  1221111   11100 0011 137


Q ss_pred             cCEEEECCCCh---H-HHHHHHHHhhcCCceEEEE
Q 017457          255 ADYCFECIGLT---S-VMNDAFNSSREGWGKTVIL  285 (371)
Q Consensus       255 ~d~vid~~g~~---~-~~~~~~~~l~~~~G~~v~~  285 (371)
                      +|+|+.....+   . .+..+.+.|+++ |.++..
T Consensus       144 ~D~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~  177 (230)
T 1fbn_A          144 VDVIYEDVAQPNQAEILIKNAKWFLKKG-GYGMIA  177 (230)
T ss_dssp             EEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             EEEEEEecCChhHHHHHHHHHHHhCCCC-cEEEEE
Confidence            99999665554   2 378888999998 998875

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=95.66  E-value=0.0084  Score=52.69  Aligned_cols=76  Identities=14%  Similarity=0.185  Sum_probs=48.2

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceE-EcCCCCCCccHHHHHHHhhC--CCcCEE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMTD--GGADYC  258 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~--gg~d~v  258 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|++++++.++.+.   ..+..+ .|-.+  .++..+.+.+...  +++|++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~---~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g~iD~l  100 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNY-RVVATSRSIKPSAD---PDIHTVAGDISK--PETADRIVREGIERFGRIDSL  100 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCCCCSS---TTEEEEESCTTS--HHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccc---CceEEEEccCCC--HHHHHHHHHHHHHHCCCCCEE
Confidence            5789999998 9999999998888999 99999987654321   111111 12222  1222222222221  379999


Q ss_pred             EECCCC
Q 017457          259 FECIGL  264 (371)
Q Consensus       259 id~~g~  264 (371)
                      +++.|.
T Consensus       101 v~nAg~  106 (260)
T 3un1_A          101 VNNAGV  106 (260)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            998873

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=95.65  E-value=0.035  Score=48.99  Aligned_cols=94  Identities=17%  Similarity=0.172  Sum_probs=59.8

Q ss_pred             eEEEEcC-ChHHHHHHHHHHHc--CCCeEEEEcCChhHHHHHHHhCcceEE-cCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          186 TVAIFGL-GAVGLAVAEGARLN--RASKIIGVDINPEKFEIGKKFGITDFI-NPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       186 ~VLI~G~-g~~G~~ai~la~~~--g~~~Vi~~~~~~~~~~~~~~lga~~v~-~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      +|||+|+ |.+|...++.+...  |. +|+++++++++.+.+...+...+. |..+      .+.+.+... ++|+||++
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~D~~d------~~~~~~~~~-~~d~vi~~   72 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPAS-QIVAIVRNPAKAQALAAQGITVRQADYGD------EAALTSALQ-GVEKLLLI   72 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTCHHHHHTTCEEEECCTTC------HHHHHHHTT-TCSEEEEC
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCc-eEEEEEcChHhhhhhhcCCCeEEEcCCCC------HHHHHHHHh-CCCEEEEe
Confidence            4899998 99999999888777  88 899999887766555544544332 2222      233444433 68999998


Q ss_pred             CCCh-----HHHHHHHHHhhcC-CceEEEECc
Q 017457          262 IGLT-----SVMNDAFNSSREG-WGKTVILGV  287 (371)
Q Consensus       262 ~g~~-----~~~~~~~~~l~~~-~G~~v~~g~  287 (371)
                      .+..     .....+++.+... -++++.++.
T Consensus        73 a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss  104 (286)
T 2zcu_A           73 SSSEVGQRAPQHRNVINAAKAAGVKFIAYTSL  104 (286)
T ss_dssp             C--------CHHHHHHHHHHHHTCCEEEEEEE
T ss_pred             CCCCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence            8742     1234555555443 147888765

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=95.65  E-value=0.023  Score=48.52  Aligned_cols=95  Identities=15%  Similarity=0.171  Sum_probs=65.9

Q ss_pred             CCCCCCeEEEEcCChHHHHHHHHHHHcCC------CeEEEEcCChhHHHHHHHh----C-----cc--eEEcCCCCCCcc
Q 017457          180 GVEVGSTVAIFGLGAVGLAVAEGARLNRA------SKIIGVDINPEKFEIGKKF----G-----IT--DFINPATCGDKT  242 (371)
Q Consensus       180 ~~~~g~~VLI~G~g~~G~~ai~la~~~g~------~~Vi~~~~~~~~~~~~~~l----g-----a~--~v~~~~~~~~~~  242 (371)
                      .++++++||-+|+|. |..+..+++..+.      .+|++++.+++..+.+++.    +     ..  .++..+      
T Consensus        81 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d------  153 (227)
T 1r18_A           81 HLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGD------  153 (227)
T ss_dssp             TCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESC------
T ss_pred             hCCCCCEEEEECCCc-cHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECC------
Confidence            478899999999876 8888888887652      3899999999877776542    2     11  222211      


Q ss_pred             HHHHHHHhhC-CCcCEEEECCCChHHHHHHHHHhhcCCceEEEE
Q 017457          243 VSQVIKEMTD-GGADYCFECIGLTSVMNDAFNSSREGWGKTVIL  285 (371)
Q Consensus       243 ~~~~i~~~~~-gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~  285 (371)
                      ..+   .+.. +.||+|+....-....+.+.+.|+++ |+++..
T Consensus       154 ~~~---~~~~~~~fD~I~~~~~~~~~~~~~~~~Lkpg-G~lvi~  193 (227)
T 1r18_A          154 GRK---GYPPNAPYNAIHVGAAAPDTPTELINQLASG-GRLIVP  193 (227)
T ss_dssp             GGG---CCGGGCSEEEEEECSCBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             ccc---CCCcCCCccEEEECCchHHHHHHHHHHhcCC-CEEEEE
Confidence            111   1122 37999997766555568899999998 987765

>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*

Probab=95.64  E-value=0.027  Score=50.03  Aligned_cols=93  Identities=18%  Similarity=0.249  Sum_probs=63.6

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh-----Cc---------c--eEEcCCCCCCccHHH
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-----GI---------T--DFINPATCGDKTVSQ  245 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l-----ga---------~--~v~~~~~~~~~~~~~  245 (371)
                      .++++||++|+|. |..+..+++. +..+|++++.+++..+.+++.     +.         .  .++.      .+..+
T Consensus        74 ~~~~~VLdiG~G~-G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~------~D~~~  145 (281)
T 1mjf_A           74 PKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTI------GDGFE  145 (281)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEE------SCHHH
T ss_pred             CCCCeEEEEcCCc-CHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEE------CchHH
Confidence            5678999999865 6667777777 666999999999988887653     21         1  2221      23333


Q ss_pred             HHHHhhCCCcCEEE-ECCC---------ChHHHHHHHHHhhcCCceEEEE
Q 017457          246 VIKEMTDGGADYCF-ECIG---------LTSVMNDAFNSSREGWGKTVIL  285 (371)
Q Consensus       246 ~i~~~~~gg~d~vi-d~~g---------~~~~~~~~~~~l~~~~G~~v~~  285 (371)
                      .+..  .+.+|+|+ |...         ....++.+.+.|+++ |.++.-
T Consensus       146 ~l~~--~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pg-G~lv~~  192 (281)
T 1mjf_A          146 FIKN--NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNP-GIYVTQ  192 (281)
T ss_dssp             HHHH--CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEE-EEEEEE
T ss_pred             Hhcc--cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEE
Confidence            3433  44899998 5432         134478889999998 988775

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=95.62  E-value=0.067  Score=48.90  Aligned_cols=77  Identities=21%  Similarity=0.221  Sum_probs=52.3

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHH-h---CcceEEcCCCCCCccHHHHHHHhhCCCc
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKK-F---GITDFINPATCGDKTVSQVIKEMTDGGA  255 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~-l---ga~~v~~~~~~~~~~~~~~i~~~~~gg~  255 (371)
                      -.+++|||+|+ |.+|...++.+... |..+|+++++++.+.+.+.+ +   +.. ++..+-   .+ .+.+.+... ++
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~-~~~~Dl---~d-~~~l~~~~~-~~   92 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMR-FFIGDV---RD-LERLNYALE-GV   92 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEE-EEECCT---TC-HHHHHHHTT-TC
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEE-EEECCC---CC-HHHHHHHHh-cC
Confidence            45789999998 99999998888777 86589999998887665543 3   222 221111   12 233444433 79


Q ss_pred             CEEEECCCC
Q 017457          256 DYCFECIGL  264 (371)
Q Consensus       256 d~vid~~g~  264 (371)
                      |+||++.+.
T Consensus        93 D~Vih~Aa~  101 (344)
T 2gn4_A           93 DICIHAAAL  101 (344)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999874

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=95.62  E-value=0.053  Score=51.46  Aligned_cols=104  Identities=13%  Similarity=0.173  Sum_probs=70.2

Q ss_pred             cCCCCCCeEEEEcCChHHHHHHHHHHH-cCC--CeEEEEcCChhHHHHHHHhCcceEE-cCCCCCCccHHHHHHHhhCCC
Q 017457          179 AGVEVGSTVAIFGLGAVGLAVAEGARL-NRA--SKIIGVDINPEKFEIGKKFGITDFI-NPATCGDKTVSQVIKEMTDGG  254 (371)
Q Consensus       179 ~~~~~g~~VLI~G~g~~G~~ai~la~~-~g~--~~Vi~~~~~~~~~~~~~~lga~~v~-~~~~~~~~~~~~~i~~~~~gg  254 (371)
                      ..+....+|||+|+|++|..++.++.. .+.  ..|++++....+.+..+..|..... +-+.   .+..+.+..+..++
T Consensus         8 ~~~~~~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~~~~~~~Vda---dnv~~~l~aLl~~~   84 (480)
T 2ph5_A            8 KKILFKNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVSFKLQQITP---QNYLEVIGSTLEEN   84 (480)
T ss_dssp             TCBCCCSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTCEEEECCCCT---TTHHHHTGGGCCTT
T ss_pred             ceecCCCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCCceeEEeccc---hhHHHHHHHHhcCC
Confidence            345666789999999999999877754 455  2688888776655556566754322 2222   44545555555544


Q ss_pred             cCEEEECCCChHHHHHHHHHhhcCCceEEEECc
Q 017457          255 ADYCFECIGLTSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       255 ~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                       |+|+|++.....+..+-.|+..+ -.+++...
T Consensus        85 -DvVIN~s~~~~~l~Im~acleaG-v~YlDTa~  115 (480)
T 2ph5_A           85 -DFLIDVSIGISSLALIILCNQKG-ALYINAAT  115 (480)
T ss_dssp             -CEEEECCSSSCHHHHHHHHHHHT-CEEEESSC
T ss_pred             -CEEEECCccccCHHHHHHHHHcC-CCEEECCC
Confidence             99999876655567777788886 77888764

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=95.61  E-value=0.033  Score=49.24  Aligned_cols=91  Identities=16%  Similarity=0.167  Sum_probs=63.3

Q ss_pred             CeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCC
Q 017457          185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL  264 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~  264 (371)
                      .+|||+|+|.+|...+..+...|. +|+++++++++.+.+...+...+.- +-   .++.       -.++|+||++.+.
T Consensus         6 ~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~-D~---~d~~-------~~~~d~vi~~a~~   73 (286)
T 3ius_A            6 GTLLSFGHGYTARVLSRALAPQGW-RIIGTSRNPDQMEAIRASGAEPLLW-PG---EEPS-------LDGVTHLLISTAP   73 (286)
T ss_dssp             CEEEEETCCHHHHHHHHHHGGGTC-EEEEEESCGGGHHHHHHTTEEEEES-SS---SCCC-------CTTCCEEEECCCC
T ss_pred             CcEEEECCcHHHHHHHHHHHHCCC-EEEEEEcChhhhhhHhhCCCeEEEe-cc---cccc-------cCCCCEEEECCCc
Confidence            589999999999999999988899 9999999998888777666654432 11   1211       2379999998864


Q ss_pred             h----HHHHHHHHHhhc--C-CceEEEECc
Q 017457          265 T----SVMNDAFNSSRE--G-WGKTVILGV  287 (371)
Q Consensus       265 ~----~~~~~~~~~l~~--~-~G~~v~~g~  287 (371)
                      .    .....+++.+..  . -.+++.++.
T Consensus        74 ~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss  103 (286)
T 3ius_A           74 DSGGDPVLAALGDQIAARAAQFRWVGYLST  103 (286)
T ss_dssp             BTTBCHHHHHHHHHHHHTGGGCSEEEEEEE
T ss_pred             cccccHHHHHHHHHHHhhcCCceEEEEeec
Confidence            2    223455555543  1 147877764

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=95.60  E-value=0.032  Score=47.48  Aligned_cols=97  Identities=16%  Similarity=0.139  Sum_probs=66.0

Q ss_pred             CCCCCCeEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHH----hC-----cc--eEEcCCCCCCccHHHHH
Q 017457          180 GVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FG-----IT--DFINPATCGDKTVSQVI  247 (371)
Q Consensus       180 ~~~~g~~VLI~G~g~~G~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~----lg-----a~--~v~~~~~~~~~~~~~~i  247 (371)
                      .++++++||-+|+|. |..+..+++..|. .+|++++.+++..+.+++    .|     .+  .++..+      .... 
T Consensus        74 ~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d------~~~~-  145 (226)
T 1i1n_A           74 QLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGD------GRMG-  145 (226)
T ss_dssp             TSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESC------GGGC-
T ss_pred             hCCCCCEEEEEcCCc-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECC------cccC-
Confidence            378899999999876 8888888888763 289999999988777654    22     11  222211      1100 


Q ss_pred             HHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEEC
Q 017457          248 KEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       248 ~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                       ....+.||+|+....-...+..+.+.|+++ |+++..-
T Consensus       146 -~~~~~~fD~i~~~~~~~~~~~~~~~~Lkpg-G~lv~~~  182 (226)
T 1i1n_A          146 -YAEEAPYDAIHVGAAAPVVPQALIDQLKPG-GRLILPV  182 (226)
T ss_dssp             -CGGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEEE
T ss_pred             -cccCCCcCEEEECCchHHHHHHHHHhcCCC-cEEEEEE
Confidence             011237999987665555478899999998 9887753

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=95.59  E-value=0.064  Score=51.97  Aligned_cols=80  Identities=16%  Similarity=0.148  Sum_probs=51.0

Q ss_pred             CCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH-------HHHHHHhCcce-EEcCCCCCCccHHHHHHHhh
Q 017457          181 VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-------FEIGKKFGITD-FINPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       181 ~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~-------~~~~~~lga~~-v~~~~~~~~~~~~~~i~~~~  251 (371)
                      +++++++||+|+ |++|...+..+...|+++|+.+.++...       .+.++..|... ++.-+-   .+. +.+.++.
T Consensus       256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv---td~-~~v~~~~  331 (511)
T 2z5l_A          256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDV---AER-DALAALV  331 (511)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCS---SCH-HHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCC---CCH-HHHHHHH
Confidence            567899999987 9999999888888898668888877531       22334445432 222111   111 2222222


Q ss_pred             C-CCcCEEEECCCC
Q 017457          252 D-GGADYCFECIGL  264 (371)
Q Consensus       252 ~-gg~d~vid~~g~  264 (371)
                      . +.+|+||++.|.
T Consensus       332 ~~~~ld~VVh~AGv  345 (511)
T 2z5l_A          332 TAYPPNAVFHTAGI  345 (511)
T ss_dssp             HHSCCSEEEECCCC
T ss_pred             hcCCCcEEEECCcc
Confidence            2 479999999873

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=95.59  E-value=0.0059  Score=53.19  Aligned_cols=100  Identities=19%  Similarity=0.216  Sum_probs=68.4

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc---eEEcCCCCCCccHHHHH
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVI  247 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~---~v~~~~~~~~~~~~~~i  247 (371)
                      +.....+.++.+||-+|+|. |..+..+++..|. +|++++.+++..+.+++    .|..   .++..+-   .++.   
T Consensus        28 l~~~~~~~~~~~VLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~---~~~~---   99 (256)
T 1nkv_A           28 LGRVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDA---AGYV---   99 (256)
T ss_dssp             HHHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCC---TTCC---
T ss_pred             HHHhcCCCCCCEEEEECCCC-CHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECCh---HhCC---
Confidence            34556788999999999877 7788889988888 99999999988777654    3321   2222111   1110   


Q ss_pred             HHhhCCCcCEEEECC------CChHHHHHHHHHhhcCCceEEEEC
Q 017457          248 KEMTDGGADYCFECI------GLTSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       248 ~~~~~gg~d~vid~~------g~~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                        . .+.||+|+...      .-...+..+.+.|+++ |+++...
T Consensus       100 --~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~Lkpg-G~l~~~~  140 (256)
T 1nkv_A          100 --A-NEKCDVAACVGATWIAGGFAGAEELLAQSLKPG-GIMLIGE  140 (256)
T ss_dssp             --C-SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEE-EEEEEEE
T ss_pred             --c-CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCC-eEEEEec
Confidence              1 23799998521      1233478888999998 9888754

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=95.58  E-value=0.032  Score=48.65  Aligned_cols=79  Identities=18%  Similarity=0.273  Sum_probs=49.1

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHH-HHHH----hCcc-eEE--cCCCCCCccHHHHHHHhh--
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFE-IGKK----FGIT-DFI--NPATCGDKTVSQVIKEMT--  251 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~-~~~~----lga~-~v~--~~~~~~~~~~~~~i~~~~--  251 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|++++++.++.+ .+++    .+.. .++  |-.+  .+++.+.+.+..  
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~   89 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSN--TDIVTKTIQQIDAD   89 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCC--HHHHHHHHHHHHHh
Confidence            4678999998 9999999998888999 8999988554332 2222    2432 122  3222  122223333322  


Q ss_pred             CCCcCEEEECCCC
Q 017457          252 DGGADYCFECIGL  264 (371)
Q Consensus       252 ~gg~d~vid~~g~  264 (371)
                      -+.+|+++++.|.
T Consensus        90 ~~~id~li~~Ag~  102 (265)
T 1h5q_A           90 LGPISGLIANAGV  102 (265)
T ss_dssp             SCSEEEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence            2369999998873

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=95.58  E-value=0.036  Score=48.71  Aligned_cols=80  Identities=11%  Similarity=0.136  Sum_probs=48.7

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhHHHHH----HHhCcc-eEE--cCCCCCCccHHHHHHHhhC
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVD-INPEKFEIG----KKFGIT-DFI--NPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~-~~~~~~~~~----~~lga~-~v~--~~~~~~~~~~~~~i~~~~~  252 (371)
                      ..++++||+|+ |++|.+.+..+...|+ +|++++ ++.++.+..    ...+.. .++  |-.+  .++..+.+.+...
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~   99 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGM-AVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVAD--FESCERCAEKVLA   99 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHH
Confidence            45789999998 9999999998888999 888887 555444332    222322 222  2222  1222222222221


Q ss_pred             --CCcCEEEECCCC
Q 017457          253 --GGADYCFECIGL  264 (371)
Q Consensus       253 --gg~d~vid~~g~  264 (371)
                        +++|++|++.|.
T Consensus       100 ~~g~id~li~nAg~  113 (269)
T 3gk3_A          100 DFGKVDVLINNAGI  113 (269)
T ss_dssp             HHSCCSEEEECCCC
T ss_pred             HcCCCCEEEECCCc
Confidence              279999998873

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=95.56  E-value=0.013  Score=52.04  Aligned_cols=93  Identities=11%  Similarity=0.006  Sum_probs=58.7

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      ..+++++|+|+|++|.+.+..+...|+++|+++.++.++.+.+.+ .. ...        .+ +.+.+.. ..+|+||++
T Consensus       115 l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~-~~-~~~--------~~-~~~~~~~-~~aDiVIna  182 (277)
T 3don_A          115 IEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSL-NI-NKI--------NL-SHAESHL-DEFDIIINT  182 (277)
T ss_dssp             GGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS-CC-EEE--------CH-HHHHHTG-GGCSEEEEC
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-hc-ccc--------cH-hhHHHHh-cCCCEEEEC
Confidence            367899999999999999999999999789999999877554332 11 111        12 1233222 268999999


Q ss_pred             CCChHHHHH----HHHHhhcCCceEEEECc
Q 017457          262 IGLTSVMND----AFNSSREGWGKTVILGV  287 (371)
Q Consensus       262 ~g~~~~~~~----~~~~l~~~~G~~v~~g~  287 (371)
                      ++....-..    ....++++ ..++++..
T Consensus       183 Tp~Gm~~~~~~~l~~~~l~~~-~~V~D~vY  211 (277)
T 3don_A          183 TPAGMNGNTDSVISLNRLASH-TLVSDIVY  211 (277)
T ss_dssp             CC-------CCSSCCTTCCSS-CEEEESCC
T ss_pred             ccCCCCCCCcCCCCHHHcCCC-CEEEEecC
Confidence            875431110    12345665 66777765

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=95.55  E-value=0.089  Score=47.38  Aligned_cols=87  Identities=18%  Similarity=0.258  Sum_probs=60.5

Q ss_pred             CeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCC
Q 017457          185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL  264 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~  264 (371)
                      .+|.|+|+|.+|...+..+...|. +|++.++++++.+.+.+.|.. +.       .+..+.+.     .+|+||.|+..
T Consensus        31 ~~I~iIG~G~mG~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~-~~-------~~~~~~~~-----~~DvVi~av~~   96 (316)
T 2uyy_A           31 KKIGFLGLGLMGSGIVSNLLKMGH-TVTVWNRTAEKCDLFIQEGAR-LG-------RTPAEVVS-----TCDITFACVSD   96 (316)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSSGGGGHHHHHTTCE-EC-------SCHHHHHH-----HCSEEEECCSS
T ss_pred             CeEEEEcccHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHcCCE-Ec-------CCHHHHHh-----cCCEEEEeCCC
Confidence            579999999999998888888898 899999999988887776653 11       12323222     47899999886


Q ss_pred             hHHHHHHHH-------HhhcCCceEEEEC
Q 017457          265 TSVMNDAFN-------SSREGWGKTVILG  286 (371)
Q Consensus       265 ~~~~~~~~~-------~l~~~~G~~v~~g  286 (371)
                      +......+.       .+.++ ..++.++
T Consensus        97 ~~~~~~v~~~~~~~~~~l~~~-~~vv~~s  124 (316)
T 2uyy_A           97 PKAAKDLVLGPSGVLQGIRPG-KCYVDMS  124 (316)
T ss_dssp             HHHHHHHHHSTTCGGGGCCTT-CEEEECS
T ss_pred             HHHHHHHHcCchhHhhcCCCC-CEEEECC
Confidence            554555553       23444 4555554

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=95.55  E-value=0.051  Score=49.49  Aligned_cols=89  Identities=20%  Similarity=0.238  Sum_probs=60.9

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  262 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~  262 (371)
                      .|++|.|+|.|.+|...++.++..|. +|++.+++.++.+.+.+.|....         ++.+.+.     ..|+|+.++
T Consensus       154 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~---------~l~e~l~-----~aDvVi~~v  218 (330)
T 2gcg_A          154 TQSTVGIIGLGRIGQAIARRLKPFGV-QRFLYTGRQPRPEEAAEFQAEFV---------STPELAA-----QSDFIVVAC  218 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-CEEEEESSSCCHHHHHTTTCEEC---------CHHHHHH-----HCSEEEECC
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcchhHHHhcCceeC---------CHHHHHh-----hCCEEEEeC
Confidence            47899999999999999999999999 89999987766665555554321         1222222     468888877


Q ss_pred             CChH----HH-HHHHHHhhcCCceEEEECc
Q 017457          263 GLTS----VM-NDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       263 g~~~----~~-~~~~~~l~~~~G~~v~~g~  287 (371)
                      +...    .+ ...+..++++ ..++..+.
T Consensus       219 p~~~~t~~~i~~~~~~~mk~g-ailIn~sr  247 (330)
T 2gcg_A          219 SLTPATEGLCNKDFFQKMKET-AVFINISR  247 (330)
T ss_dssp             CCCTTTTTCBSHHHHHHSCTT-CEEEECSC
T ss_pred             CCChHHHHhhCHHHHhcCCCC-cEEEECCC
Confidence            6431    12 3456677775 66666653

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=95.52  E-value=0.007  Score=52.53  Aligned_cols=74  Identities=11%  Similarity=0.185  Sum_probs=46.4

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHH-----HHhhC--CC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVI-----KEMTD--GG  254 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i-----~~~~~--gg  254 (371)
                      .++++||+|+ |++|.+.++.+.. |. +|+++++++++.+.+.+......+..      +..+..     .+...  ++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~-~v~~~~r~~~~~~~~~~~~~~~~~~~------D~~~~~~~~~~~~~~~~~~~   75 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DH-IVYALGRNPEHLAALAEIEGVEPIES------DIVKEVLEEGGVDKLKNLDH   75 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHHTSTTEEEEEC------CHHHHHHTSSSCGGGTTCSC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHhhcCCcceec------ccchHHHHHHHHHHHHhcCC
Confidence            4789999998 9999987777654 88 89999999888877765332222221      221111     11111  27


Q ss_pred             cCEEEECCCC
Q 017457          255 ADYCFECIGL  264 (371)
Q Consensus       255 ~d~vid~~g~  264 (371)
                      +|+++++.|.
T Consensus        76 id~lv~~Ag~   85 (245)
T 3e9n_A           76 VDTLVHAAAV   85 (245)
T ss_dssp             CSEEEECC--
T ss_pred             CCEEEECCCc
Confidence            8999998874

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=95.51  E-value=0.04  Score=48.37  Aligned_cols=81  Identities=12%  Similarity=0.099  Sum_probs=48.2

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEE-EcCChhHHHHH----HHhCcc-eEEcCCCCCCccHHHHHHHhhC--C
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIG-VDINPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--G  253 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~-~~~~~~~~~~~----~~lga~-~v~~~~~~~~~~~~~~i~~~~~--g  253 (371)
                      .++++||+|+ |++|.+.+..+...|+ +|++ ..++.++.+..    ++.+.. .++..+-.+.++..+.+.+...  +
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  103 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADGF-NIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHG  103 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            4689999998 9999999999989999 7755 55666554432    223322 2222221111222222322221  3


Q ss_pred             CcCEEEECCCC
Q 017457          254 GADYCFECIGL  264 (371)
Q Consensus       254 g~d~vid~~g~  264 (371)
                      .+|+++++.|.
T Consensus       104 ~id~li~nAg~  114 (267)
T 4iiu_A          104 AWYGVVSNAGI  114 (267)
T ss_dssp             CCSEEEECCCC
T ss_pred             CccEEEECCCC
Confidence            79999998873

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=95.50  E-value=0.05  Score=49.77  Aligned_cols=88  Identities=19%  Similarity=0.243  Sum_probs=60.7

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  262 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~  262 (371)
                      .|++|.|+|.|.+|...++.++..|. +|++.+++..+.+...  |+..+        .++.+.+.     ..|+|+.++
T Consensus       172 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~--g~~~~--------~~l~ell~-----~sDvV~l~~  235 (345)
T 4g2n_A          172 TGRRLGIFGMGRIGRAIATRARGFGL-AIHYHNRTRLSHALEE--GAIYH--------DTLDSLLG-----ASDIFLIAA  235 (345)
T ss_dssp             TTCEEEEESCSHHHHHHHHHHHTTTC-EEEEECSSCCCHHHHT--TCEEC--------SSHHHHHH-----TCSEEEECS
T ss_pred             CCCEEEEEEeChhHHHHHHHHHHCCC-EEEEECCCCcchhhhc--CCeEe--------CCHHHHHh-----hCCEEEEec
Confidence            47899999999999999999999999 9999998764443322  43221        12333222     578888777


Q ss_pred             CCh-H----HHHHHHHHhhcCCceEEEECc
Q 017457          263 GLT-S----VMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       263 g~~-~----~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      +.. .    .-...+..|+++ ..+|.++.
T Consensus       236 Plt~~T~~li~~~~l~~mk~g-ailIN~aR  264 (345)
T 4g2n_A          236 PGRPELKGFLDHDRIAKIPEG-AVVINISR  264 (345)
T ss_dssp             CCCGGGTTCBCHHHHHHSCTT-EEEEECSC
T ss_pred             CCCHHHHHHhCHHHHhhCCCC-cEEEECCC
Confidence            632 1    124667778886 77777763

>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*

Probab=95.50  E-value=0.074  Score=48.49  Aligned_cols=87  Identities=16%  Similarity=0.135  Sum_probs=61.2

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  262 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~  262 (371)
                      .|++|.|+|.|.+|...++.++..|. +|++.+++.++.  +.+. +. ..       .++.+.+.     ..|+|+.++
T Consensus       145 ~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~--~~~~-~~-~~-------~~l~ell~-----~aDvV~l~~  207 (333)
T 1j4a_A          145 RDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDIFRNPE--LEKK-GY-YV-------DSLDDLYK-----QADVISLHV  207 (333)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHH--HHHT-TC-BC-------SCHHHHHH-----HCSEEEECS
T ss_pred             CCCEEEEEccCHHHHHHHHHHHHCCC-EEEEECCCcchh--HHhh-Ce-ec-------CCHHHHHh-----hCCEEEEcC
Confidence            57899999999999999999999999 999999877654  2322 22 11       12332222     478999887


Q ss_pred             CChHH----H-HHHHHHhhcCCceEEEECc
Q 017457          263 GLTSV----M-NDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       263 g~~~~----~-~~~~~~l~~~~G~~v~~g~  287 (371)
                      +....    + ...+..++++ +.++.++.
T Consensus       208 p~~~~t~~li~~~~l~~mk~g-a~lIn~ar  236 (333)
T 1j4a_A          208 PDVPANVHMINDESIAKMKQD-VVIVNVSR  236 (333)
T ss_dssp             CCCGGGTTCBSHHHHHHSCTT-EEEEECSC
T ss_pred             CCcHHHHHHHhHHHHhhCCCC-cEEEECCC
Confidence            74321    1 3566788887 88888874

>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}

Probab=95.49  E-value=0.18  Score=45.68  Aligned_cols=132  Identities=13%  Similarity=0.197  Sum_probs=80.0

Q ss_pred             eEEEEcCChHHHHHHHHHHHc-CCCeEE-EEcCChhHHHHH-HHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457          186 TVAIFGLGAVGLAVAEGARLN-RASKII-GVDINPEKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  262 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~-g~~~Vi-~~~~~~~~~~~~-~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~  262 (371)
                      +|.|+|+|.+|...+..++.. ++ +++ +.++++++.+.+ +++|+.  +       .++.+.+.   ...+|+|+.|+
T Consensus         5 ~vgiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~~~~~~~~--~-------~~~~~~l~---~~~~D~V~i~t   71 (331)
T 4hkt_A            5 RFGLLGAGRIGKVHAKAVSGNADA-RLVAVADAFPAAAEAIAGAYGCE--V-------RTIDAIEA---AADIDAVVICT   71 (331)
T ss_dssp             EEEEECCSHHHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHHHHTTCE--E-------CCHHHHHH---CTTCCEEEECS
T ss_pred             EEEEECCCHHHHHHHHHHhhCCCc-EEEEEECCCHHHHHHHHHHhCCC--c-------CCHHHHhc---CCCCCEEEEeC
Confidence            688999999998877766654 77 555 577788776654 456764  2       23433333   12799999999


Q ss_pred             CChHHHHHHHHHhhcCCceEEEECccCCCCcee-cCHHHHhc--CceEEEeeccCCCchhhHHHHHHHHHcCCCC
Q 017457          263 GLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS-LNSIEILK--GRSVCGTYFGGLKPRSDIATLAQKYLDKELN  334 (371)
Q Consensus       263 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~-~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~  334 (371)
                      +.....+.+..++..  |.-+++..+....... -.......  +..+.-..  ..+....++.+.+++++|.+-
T Consensus        72 p~~~h~~~~~~al~~--gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~--~~r~~p~~~~~~~~i~~g~iG  142 (331)
T 4hkt_A           72 PTDTHADLIERFARA--GKAIFCEKPIDLDAERVRACLKVVSDTKAKLMVGF--NRRFDPHFMAVRKAIDDGRIG  142 (331)
T ss_dssp             CGGGHHHHHHHHHHT--TCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECC--GGGGCHHHHHHHHHHHTTTTC
T ss_pred             CchhHHHHHHHHHHc--CCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEcc--cccCCHHHHHHHHHHHcCCCC
Confidence            988778888888877  4556665321111000 00111122  34343222  223346688889999998663

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=95.48  E-value=0.04  Score=49.95  Aligned_cols=76  Identities=20%  Similarity=0.198  Sum_probs=49.1

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHH--HHHHHhCc---ceEEcCCCCCCccHHHHHHHhhCC-CcC
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKF--EIGKKFGI---TDFINPATCGDKTVSQVIKEMTDG-GAD  256 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~--~~~~~lga---~~v~~~~~~~~~~~~~~i~~~~~g-g~d  256 (371)
                      +++|||+|+ |.+|...++.+...|+ +|+++++++++.  +.++.++.   -.++..+-   .+ .+.+.+...+ ++|
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl---~d-~~~~~~~~~~~~~d   77 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGY-EVYGADRRSGEFASWRLKELGIENDVKIIHMDL---LE-FSNIIRTIEKVQPD   77 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCCSTTTTHHHHHTTCTTTEEECCCCT---TC-HHHHHHHHHHHCCS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCCcccccccHhhccccCceeEEECCC---CC-HHHHHHHHHhcCCC
Confidence            678999998 9999999988888899 999999876542  23444421   12222111   12 1233333333 689


Q ss_pred             EEEECCCC
Q 017457          257 YCFECIGL  264 (371)
Q Consensus       257 ~vid~~g~  264 (371)
                      +||++.+.
T Consensus        78 ~vih~A~~   85 (345)
T 2z1m_A           78 EVYNLAAQ   85 (345)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=95.48  E-value=0.019  Score=49.96  Aligned_cols=84  Identities=13%  Similarity=0.126  Sum_probs=48.0

Q ss_pred             CCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhHHH----HHHHhCcc-eEEcCCCCCCccHHHHHHHhhC
Q 017457          180 GVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVD-INPEKFE----IGKKFGIT-DFINPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       180 ~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~-~~~~~~~----~~~~lga~-~v~~~~~~~~~~~~~~i~~~~~  252 (371)
                      ...++++|||+|+ |++|.+.+..+...|+ +|++++ ++.++.+    .+++.+.+ .++..+-.+.++..+.+.+...
T Consensus         9 ~~~~~k~vlITGas~giG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   87 (256)
T 3ezl_A            9 MVMSQRIAYVTGGMGGIGTSICQRLHKDGF-RVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKA   87 (256)
T ss_dssp             ----CEEEEETTTTSHHHHHHHHHHHHTTE-EEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHH
Confidence            3467889999998 9999999888888999 888776 4443332    23334432 2222211011222222332221


Q ss_pred             --CCcCEEEECCCC
Q 017457          253 --GGADYCFECIGL  264 (371)
Q Consensus       253 --gg~d~vid~~g~  264 (371)
                        +++|+++++.|.
T Consensus        88 ~~g~id~lv~~Ag~  101 (256)
T 3ezl_A           88 EVGEIDVLVNNAGI  101 (256)
T ss_dssp             HTCCEEEEEECCCC
T ss_pred             hcCCCCEEEECCCC
Confidence              379999998873

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=95.48  E-value=0.043  Score=50.32  Aligned_cols=89  Identities=24%  Similarity=0.300  Sum_probs=57.5

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  262 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~  262 (371)
                      .|++|.|+|.|.+|...++.++..|. +|++.+++.++ +..+..|+..+        .++.+.+.     ..|+|+.++
T Consensus       167 ~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~~--------~~l~ell~-----~aDvV~l~~  231 (347)
T 1mx3_A          167 RGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPYLSD-GVERALGLQRV--------STLQDLLF-----HSDCVTLHC  231 (347)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCT-THHHHHTCEEC--------SSHHHHHH-----HCSEEEECC
T ss_pred             CCCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcch-hhHhhcCCeec--------CCHHHHHh-----cCCEEEEcC
Confidence            57899999999999999999999999 99999876543 22344565321        12222222     367777665


Q ss_pred             CChH----HH-HHHHHHhhcCCceEEEECc
Q 017457          263 GLTS----VM-NDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       263 g~~~----~~-~~~~~~l~~~~G~~v~~g~  287 (371)
                      +...    .+ ...+..|+++ ..++.++.
T Consensus       232 P~t~~t~~li~~~~l~~mk~g-ailIN~ar  260 (347)
T 1mx3_A          232 GLNEHNHHLINDFTVKQMRQG-AFLVNTAR  260 (347)
T ss_dssp             CCCTTCTTSBSHHHHTTSCTT-EEEEECSC
T ss_pred             CCCHHHHHHhHHHHHhcCCCC-CEEEECCC
Confidence            5321    11 3455666665 66666653

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=95.46  E-value=0.035  Score=52.02  Aligned_cols=85  Identities=21%  Similarity=0.188  Sum_probs=51.6

Q ss_pred             cCC-CCCCeEEEEcC-ChHHHHHHHHHHH-cCCCeEEEEcCChhH----------------HHHHHHhCcce-EEcCCCC
Q 017457          179 AGV-EVGSTVAIFGL-GAVGLAVAEGARL-NRASKIIGVDINPEK----------------FEIGKKFGITD-FINPATC  238 (371)
Q Consensus       179 ~~~-~~g~~VLI~G~-g~~G~~ai~la~~-~g~~~Vi~~~~~~~~----------------~~~~~~lga~~-v~~~~~~  238 (371)
                      ..+ +.++++||+|+ +++|.+.+..+.. .|+ +|++++++.+.                .+.+++.|... .+.-+-.
T Consensus        55 ~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA-~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvt  133 (422)
T 3s8m_A           55 GVRNDGPKKVLVIGASSGYGLASRITAAFGFGA-DTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAF  133 (422)
T ss_dssp             CCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred             cccccCCCEEEEECCChHHHHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCC
Confidence            345 45789999998 8999997777776 899 89888765432                13445566432 2222211


Q ss_pred             CCccH---HHHHHHhhCCCcCEEEECCCC
Q 017457          239 GDKTV---SQVIKEMTDGGADYCFECIGL  264 (371)
Q Consensus       239 ~~~~~---~~~i~~~~~gg~d~vid~~g~  264 (371)
                      +.+..   .+.+.+..+|++|+++++.|.
T Consensus       134 d~~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          134 SDAARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             SHHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence            11222   222333332589999998765

>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A

Probab=95.46  E-value=0.03  Score=51.14  Aligned_cols=97  Identities=20%  Similarity=0.275  Sum_probs=64.9

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh------Cc--c--eEEcCCCCCCccHHHHHHHh
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF------GI--T--DFINPATCGDKTVSQVIKEM  250 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l------ga--~--~v~~~~~~~~~~~~~~i~~~  250 (371)
                      ..++++||++|+|. |..+..+++..+..+|++++.+++..+.+++.      |.  .  .++.      .+..+.+...
T Consensus       118 ~~~~~~VLdIG~G~-G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~------~D~~~~l~~~  190 (334)
T 1xj5_A          118 IPNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVI------GDGVAFLKNA  190 (334)
T ss_dssp             SSCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEE------SCHHHHHHTS
T ss_pred             CCCCCEEEEECCCc-cHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEE------CCHHHHHHhc
Confidence            45678999999865 66677778766544999999999888877652      11  1  2222      3444444333


Q ss_pred             hCCCcCEEEE-CC---C------ChHHHHHHHHHhhcCCceEEEE
Q 017457          251 TDGGADYCFE-CI---G------LTSVMNDAFNSSREGWGKTVIL  285 (371)
Q Consensus       251 ~~gg~d~vid-~~---g------~~~~~~~~~~~l~~~~G~~v~~  285 (371)
                      ..+.||+|+. ..   +      ....++.+.+.|+++ |.++.-
T Consensus       191 ~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~  234 (334)
T 1xj5_A          191 AEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPG-GVVCTQ  234 (334)
T ss_dssp             CTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEE-EEEEEE
T ss_pred             cCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCC-cEEEEe
Confidence            3347999984 32   1      234578899999998 998875

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=95.45  E-value=0.15  Score=45.41  Aligned_cols=92  Identities=14%  Similarity=0.121  Sum_probs=59.1

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC-----hhHHHHHHH---hCcceEEcCCCCCCccHHHHHHHhhCCC
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN-----PEKFEIGKK---FGITDFINPATCGDKTVSQVIKEMTDGG  254 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~-----~~~~~~~~~---lga~~v~~~~~~~~~~~~~~i~~~~~gg  254 (371)
                      ..+|||+|+ |.+|...+..+...|. +|++++++     +++.+.++.   .++. ++..+-   .+ .+.+.+... +
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~~~-~~~~D~---~d-~~~l~~~~~-~   76 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGH-PTYVLFRPEVVSNIDKVQMLLYFKQLGAK-LIEASL---DD-HQRLVDALK-Q   76 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCSCCSSCHHHHHHHHHHHTTTCE-EECCCS---SC-HHHHHHHHT-T
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCC-cEEEEECCCcccchhHHHHHHHHHhCCeE-EEeCCC---CC-HHHHHHHHh-C
Confidence            467999998 9999999998888898 89999987     445444433   3443 332221   12 233444433 6


Q ss_pred             cCEEEECCCCh------HHHHHHHHHhhcCCc---eEE
Q 017457          255 ADYCFECIGLT------SVMNDAFNSSREGWG---KTV  283 (371)
Q Consensus       255 ~d~vid~~g~~------~~~~~~~~~l~~~~G---~~v  283 (371)
                      +|+||++.+..      .....+++.+... |   +++
T Consensus        77 ~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~-g~v~~~v  113 (313)
T 1qyd_A           77 VDVVISALAGGVLSHHILEQLKLVEAIKEA-GNIKRFL  113 (313)
T ss_dssp             CSEEEECCCCSSSSTTTTTHHHHHHHHHHS-CCCSEEE
T ss_pred             CCEEEECCccccchhhHHHHHHHHHHHHhc-CCCceEE
Confidence            99999988743      2245566666654 4   666

>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}

Probab=95.44  E-value=0.13  Score=46.86  Aligned_cols=134  Identities=16%  Similarity=0.224  Sum_probs=80.0

Q ss_pred             eEEEEcCChHHHHHHHHHHHc-CCCeEE-EEcCChhHHHH-HHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457          186 TVAIFGLGAVGLAVAEGARLN-RASKII-GVDINPEKFEI-GKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  262 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~-g~~~Vi-~~~~~~~~~~~-~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~  262 (371)
                      +|.|+|+|.+|...+..++.. ++ +++ +.++++++.+. ++++|...++       .++.+.+.   ...+|+|+.|+
T Consensus         4 rvgiIG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~~~~~~~~~~~-------~~~~~ll~---~~~~D~V~i~t   72 (344)
T 3ezy_A            4 RIGVIGLGRIGTIHAENLKMIDDA-ILYAISDVREDRLREMKEKLGVEKAY-------KDPHELIE---DPNVDAVLVCS   72 (344)
T ss_dssp             EEEEECCSHHHHHHHHHGGGSTTE-EEEEEECSCHHHHHHHHHHHTCSEEE-------SSHHHHHH---CTTCCEEEECS
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCc-EEEEEECCCHHHHHHHHHHhCCCcee-------CCHHHHhc---CCCCCEEEEcC
Confidence            688999999998866655543 66 555 56778777655 4557765554       23433332   12799999999


Q ss_pred             CChHHHHHHHHHhhcCCceEEEECccCCCCcee-cCHHHHhc--CceEEEeeccCCCchhhHHHHHHHHHcCCCC
Q 017457          263 GLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS-LNSIEILK--GRSVCGTYFGGLKPRSDIATLAQKYLDKELN  334 (371)
Q Consensus       263 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~-~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~  334 (371)
                      +.......+..++..  |.-+++..+....... ........  +..+.-..  .++....++.+.+++++|.+-
T Consensus        73 p~~~h~~~~~~al~~--gk~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~--~~R~~p~~~~~k~~i~~G~iG  143 (344)
T 3ezy_A           73 STNTHSELVIACAKA--KKHVFCEKPLSLNLADVDRMIEETKKADVILFTGF--NRRFDRNFKKLKEAVENGTIG  143 (344)
T ss_dssp             CGGGHHHHHHHHHHT--TCEEEEESCSCSCHHHHHHHHHHHHHHTCCEEEEC--GGGGCHHHHHHHHHHHTTTTS
T ss_pred             CCcchHHHHHHHHhc--CCeEEEECCCCCCHHHHHHHHHHHHHhCCcEEEee--cccCCHHHHHHHHHHHcCCCC
Confidence            988777888888877  4445554321111000 00111112  34333222  233346788888999998663

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=95.43  E-value=0.049  Score=50.21  Aligned_cols=87  Identities=26%  Similarity=0.379  Sum_probs=59.1

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  262 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~  262 (371)
                      .|++|.|+|.|.+|...++.++..|. +|++.+++. +.+.+.+.|+..         .++.+.+.     ..|+|+-++
T Consensus       175 ~gktvGIIGlG~IG~~vA~~l~~fG~-~V~~~d~~~-~~~~~~~~g~~~---------~~l~ell~-----~aDvV~l~~  238 (365)
T 4hy3_A          175 AGSEIGIVGFGDLGKALRRVLSGFRA-RIRVFDPWL-PRSMLEENGVEP---------ASLEDVLT-----KSDFIFVVA  238 (365)
T ss_dssp             SSSEEEEECCSHHHHHHHHHHTTSCC-EEEEECSSS-CHHHHHHTTCEE---------CCHHHHHH-----SCSEEEECS
T ss_pred             CCCEEEEecCCcccHHHHHhhhhCCC-EEEEECCCC-CHHHHhhcCeee---------CCHHHHHh-----cCCEEEEcC
Confidence            47899999999999999999999999 999999875 344455566531         12322221     467777665


Q ss_pred             CChH-----HHHHHHHHhhcCCceEEEEC
Q 017457          263 GLTS-----VMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       263 g~~~-----~~~~~~~~l~~~~G~~v~~g  286 (371)
                      +...     .-...+..|+++ +.+|.++
T Consensus       239 Plt~~T~~li~~~~l~~mk~g-ailIN~a  266 (365)
T 4hy3_A          239 AVTSENKRFLGAEAFSSMRRG-AAFILLS  266 (365)
T ss_dssp             CSSCC---CCCHHHHHTSCTT-CEEEECS
T ss_pred             cCCHHHHhhcCHHHHhcCCCC-cEEEECc
Confidence            5321     114556667776 7777776

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=95.43  E-value=0.11  Score=47.51  Aligned_cols=98  Identities=12%  Similarity=0.165  Sum_probs=60.2

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHH--HHHHHh-CcceEEcCC-CCCCccHHHHHHHhhCCCcCEE
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKF--EIGKKF-GITDFINPA-TCGDKTVSQVIKEMTDGGADYC  258 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~--~~~~~l-ga~~v~~~~-~~~~~~~~~~i~~~~~gg~d~v  258 (371)
                      +++|||+|+ |.+|...+..+...|. +|+++++++++.  +.+... ++. ++..+ -   .+ .+.+.+... ++|+|
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~l~~~~~v~-~v~~D~l---~d-~~~l~~~~~-~~d~V   77 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGH-HVRAQVHSLKGLIAEELQAIPNVT-LFQGPLL---NN-VPLMDTLFE-GAHLA   77 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCSCSHHHHHHHTSTTEE-EEESCCT---TC-HHHHHHHHT-TCSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCCChhhHHHHhhcCCcE-EEECCcc---CC-HHHHHHHHh-cCCEE
Confidence            568999998 9999999988888898 899988877654  333322 333 22222 1   11 123333333 68999


Q ss_pred             EECCCCh-----HHHHHHHHHhhcC--CceEEEECcc
Q 017457          259 FECIGLT-----SVMNDAFNSSREG--WGKTVILGVE  288 (371)
Q Consensus       259 id~~g~~-----~~~~~~~~~l~~~--~G~~v~~g~~  288 (371)
                      |.+.+..     .....+++.+...  -++++.++..
T Consensus        78 i~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~  114 (352)
T 1xgk_A           78 FINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMP  114 (352)
T ss_dssp             EECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECC
T ss_pred             EEcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCc
Confidence            9776542     1124555555543  1488888753

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=95.42  E-value=0.039  Score=45.97  Aligned_cols=62  Identities=18%  Similarity=0.348  Sum_probs=41.8

Q ss_pred             eEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCC
Q 017457          186 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG  263 (371)
Q Consensus       186 ~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g  263 (371)
                      ++||+|+ |++|...++.+. .|+ +|++++++++          ....|-.+  .+.+.+.+.+.  +++|+++++.|
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~-~V~~~~r~~~----------~~~~D~~~--~~~~~~~~~~~--~~~d~vi~~ag   67 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKA-EVITAGRHSG----------DVTVDITN--IDSIKKMYEQV--GKVDAIVSATG   67 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTS-EEEEEESSSS----------SEECCTTC--HHHHHHHHHHH--CCEEEEEECCC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCC-eEEEEecCcc----------ceeeecCC--HHHHHHHHHHh--CCCCEEEECCC
Confidence            7999998 999999988888 899 8999987754          11223222  12222223322  36899999877

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=95.42  E-value=0.15  Score=45.42  Aligned_cols=87  Identities=15%  Similarity=0.234  Sum_probs=59.4

Q ss_pred             CeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCC
Q 017457          185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL  264 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~  264 (371)
                      .+|.|+|+|.+|...+..+...|. +|++.++++++.+.+.+.|.. +.       .+..+.+.     .+|+|+-+++.
T Consensus         5 ~~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~-~~-------~~~~~~~~-----~~D~vi~~vp~   70 (301)
T 3cky_A            5 IKIGFIGLGAMGKPMAINLLKEGV-TVYAFDLMEANVAAVVAQGAQ-AC-------ENNQKVAA-----ASDIIFTSLPN   70 (301)
T ss_dssp             CEEEEECCCTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHTTTCE-EC-------SSHHHHHH-----HCSEEEECCSS
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCe-ec-------CCHHHHHh-----CCCEEEEECCC
Confidence            579999999999998888877898 899999999888877666643 11       12333332     47899988876


Q ss_pred             hHHHHHHH-------HHhhcCCceEEEEC
Q 017457          265 TSVMNDAF-------NSSREGWGKTVILG  286 (371)
Q Consensus       265 ~~~~~~~~-------~~l~~~~G~~v~~g  286 (371)
                      +......+       ..++++ ..++.++
T Consensus        71 ~~~~~~v~~~~~~l~~~l~~~-~~vv~~~   98 (301)
T 3cky_A           71 AGIVETVMNGPGGVLSACKAG-TVIVDMS   98 (301)
T ss_dssp             HHHHHHHHHSTTCHHHHSCTT-CEEEECC
T ss_pred             HHHHHHHHcCcchHhhcCCCC-CEEEECC
Confidence            55344444       345554 5555554

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=95.40  E-value=0.056  Score=52.56  Aligned_cols=85  Identities=9%  Similarity=0.037  Sum_probs=51.7

Q ss_pred             CCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCCh-------------h----HHHHHHHhCcce-EEcCCCCC
Q 017457          180 GVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGV-DINP-------------E----KFEIGKKFGITD-FINPATCG  239 (371)
Q Consensus       180 ~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~-~~~~-------------~----~~~~~~~lga~~-v~~~~~~~  239 (371)
                      .+++++++||+|+ |++|...+..+...|+++++.+ .++.             +    ..+.+++.|... ++.-+-.+
T Consensus       247 ~~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd  326 (525)
T 3qp9_A          247 WWQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTD  326 (525)
T ss_dssp             SSCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTS
T ss_pred             eecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCC
Confidence            3578899999987 9999998888878899567777 7762             2    223344556532 22211101


Q ss_pred             CccHHHHHHHhhC-CCcCEEEECCCC
Q 017457          240 DKTVSQVIKEMTD-GGADYCFECIGL  264 (371)
Q Consensus       240 ~~~~~~~i~~~~~-gg~d~vid~~g~  264 (371)
                      .....+.+.+... +.+|.||++.|.
T Consensus       327 ~~~v~~~~~~i~~~g~id~vVh~AGv  352 (525)
T 3qp9_A          327 AEAAARLLAGVSDAHPLSAVLHLPPT  352 (525)
T ss_dssp             HHHHHHHHHTSCTTSCEEEEEECCCC
T ss_pred             HHHHHHHHHHHHhcCCCcEEEECCcC
Confidence            1223333333321 278999999884

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=95.38  E-value=0.14  Score=45.33  Aligned_cols=41  Identities=24%  Similarity=0.464  Sum_probs=36.4

Q ss_pred             CeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 017457          185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK  226 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~  226 (371)
                      ++|.|+|+|.+|...++.+...|+ +|++.++++++.+.+.+
T Consensus         5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~   45 (283)
T 4e12_A            5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDINTDALDAAKK   45 (283)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHH
Confidence            579999999999999999989999 99999999988777654

>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*

Probab=95.37  E-value=0.11  Score=48.47  Aligned_cols=106  Identities=14%  Similarity=0.122  Sum_probs=68.1

Q ss_pred             HHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-----------HhCc--c--eEEcCCCC
Q 017457          174 AAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-----------KFGI--T--DFINPATC  238 (371)
Q Consensus       174 ~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-----------~lga--~--~v~~~~~~  238 (371)
                      .+.....++++++||=+|+|. |..++++|+..|+.+|++++.+++-.+.++           .+|.  .  .++..+- 
T Consensus       164 ~il~~l~l~~gd~VLDLGCGt-G~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~-  241 (438)
T 3uwp_A          164 QMIDEIKMTDDDLFVDLGSGV-GQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDF-  241 (438)
T ss_dssp             HHHHHHCCCTTCEEEEESCTT-SHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCT-
T ss_pred             HHHHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcc-
Confidence            355667899999999999876 788888888889867999999986544443           2343  2  2333222 


Q ss_pred             CCccHHHHHHHhhCCCcCEEEE-CC-CC---hHHHHHHHHHhhcCCceEEEECc
Q 017457          239 GDKTVSQVIKEMTDGGADYCFE-CI-GL---TSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       239 ~~~~~~~~i~~~~~gg~d~vid-~~-g~---~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                        .+..  ..... ..+|+|+- +. -.   ...+...++.|+++ |+++....
T Consensus       242 --~~lp--~~d~~-~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPG-GrIVssE~  289 (438)
T 3uwp_A          242 --LSEE--WRERI-ANTSVIFVNNFAFGPEVDHQLKERFANMKEG-GRIVSSKP  289 (438)
T ss_dssp             --TSHH--HHHHH-HTCSEEEECCTTCCHHHHHHHHHHHTTSCTT-CEEEESSC
T ss_pred             --cCCc--ccccc-CCccEEEEcccccCchHHHHHHHHHHcCCCC-cEEEEeec
Confidence              2221  11111 16899984 22 11   12356778889998 99998754

>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A

Probab=95.37  E-value=0.11  Score=45.94  Aligned_cols=101  Identities=16%  Similarity=0.187  Sum_probs=64.5

Q ss_pred             HcCCCCCCeEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHH----hCcc--eEEcCCCCCCccHHHHHHHh
Q 017457          178 VAGVEVGSTVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIKEM  250 (371)
Q Consensus       178 ~~~~~~g~~VLI~G~g~~G~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~----lga~--~v~~~~~~~~~~~~~~i~~~  250 (371)
                      ...+++|++||=+|+|+ |..+..+++.+ +..+|++++.++++.+.+++    .|..  .++..      +..+....+
T Consensus        78 ~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~------D~~~~~~~~  150 (274)
T 3ajd_A           78 VLNPREDDFILDMCAAP-GGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINA------DMRKYKDYL  150 (274)
T ss_dssp             HHCCCTTCEEEETTCTT-CHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES------CHHHHHHHH
T ss_pred             HhCCCCcCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeC------ChHhcchhh
Confidence            34678899998888765 56666777764 43499999999998877654    4543  23322      222221111


Q ss_pred             --hCCCcCEEE-E--CCCC---------------------hHHHHHHHHHhhcCCceEEEEC
Q 017457          251 --TDGGADYCF-E--CIGL---------------------TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       251 --~~gg~d~vi-d--~~g~---------------------~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                        ..+.||+|+ |  |++.                     ...++.+++.|+++ |+++...
T Consensus       151 ~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~st  211 (274)
T 3ajd_A          151 LKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKD-GELVYST  211 (274)
T ss_dssp             HHTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             hhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCC-CEEEEEE
Confidence              134799997 5  4431                     23477788899998 9987754

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=95.36  E-value=0.052  Score=49.24  Aligned_cols=72  Identities=17%  Similarity=0.220  Sum_probs=45.0

Q ss_pred             eEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHH-hCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457          186 TVAIFGL-GAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  262 (371)
Q Consensus       186 ~VLI~G~-g~~G~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~  262 (371)
                      +|||+|+ |.+|...++.+... |+ +|++++++.++.+.+.. .+.. ++..+-.+..+.   +.+... ++|+||++.
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~---~~~~~~-~~d~vih~A   75 (345)
T 2bll_A            2 RVLILGVNGFIGNHLTERLLREDHY-EVYGLDIGSDAISRFLNHPHFH-FVEGDISIHSEW---IEYHVK-KCDVVLPLV   75 (345)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTC-EEEEEESCCGGGGGGTTCTTEE-EEECCTTTCSHH---HHHHHH-HCSEEEECB
T ss_pred             eEEEECCCcHHHHHHHHHHHHhCCC-EEEEEeCCcchHHHhhcCCCeE-EEeccccCcHHH---HHhhcc-CCCEEEEcc
Confidence            6999998 99999999888887 88 89999988765443221 1222 222211001122   222221 689999987


Q ss_pred             C
Q 017457          263 G  263 (371)
Q Consensus       263 g  263 (371)
                      +
T Consensus        76 ~   76 (345)
T 2bll_A           76 A   76 (345)
T ss_dssp             C
T ss_pred             c
Confidence            6

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=95.34  E-value=0.007  Score=53.40  Aligned_cols=39  Identities=23%  Similarity=0.259  Sum_probs=33.2

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHH
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKF  221 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~  221 (371)
                      -.|+++||+|+ |++|.+.++.+...|+ +|++++++.++.
T Consensus        26 l~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~   65 (266)
T 3uxy_A           26 FEGKVALVTGAAGGIGGAVVTALRAAGA-RVAVADRAVAGI   65 (266)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECSSCCTTS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence            35789999998 9999999998888999 999999876543

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=95.33  E-value=0.16  Score=44.73  Aligned_cols=90  Identities=23%  Similarity=0.313  Sum_probs=60.9

Q ss_pred             CeEEEEcCChHHHHHHHHHHHcCCC-eEEEEcCChhHHHHHHHhCcc-eEEcCCCCCCccHHHHHHHhhCC-CcCEEEEC
Q 017457          185 STVAIFGLGAVGLAVAEGARLNRAS-KIIGVDINPEKFEIGKKFGIT-DFINPATCGDKTVSQVIKEMTDG-GADYCFEC  261 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la~~~g~~-~Vi~~~~~~~~~~~~~~lga~-~v~~~~~~~~~~~~~~i~~~~~g-g~d~vid~  261 (371)
                      .+|.|+|+|.+|.+.++.++..|.. +|++.++++++.+.+++.|.. ...+       +..+.+     . .+|+|+-|
T Consensus         2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~-------~~~~~~-----~~~aDvVila   69 (281)
T 2g5c_A            2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTT-------SIAKVE-----DFSPDFVMLS   69 (281)
T ss_dssp             CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEES-------CGGGGG-----GTCCSEEEEC
T ss_pred             cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccC-------CHHHHh-----cCCCCEEEEc
Confidence            3689999999999998888888752 699999999998888888864 2221       111111     2 58999999


Q ss_pred             CCChHH---HHHHHHHhhcCCceEEEECc
Q 017457          262 IGLTSV---MNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       262 ~g~~~~---~~~~~~~l~~~~G~~v~~g~  287 (371)
                      ++....   +..+...++++ ..++.++.
T Consensus        70 vp~~~~~~v~~~l~~~l~~~-~iv~~~~~   97 (281)
T 2g5c_A           70 SPVRTFREIAKKLSYILSED-ATVTDQGS   97 (281)
T ss_dssp             SCHHHHHHHHHHHHHHSCTT-CEEEECCS
T ss_pred             CCHHHHHHHHHHHHhhCCCC-cEEEECCC
Confidence            987652   22233345554 55665553

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=95.33  E-value=0.034  Score=50.33  Aligned_cols=80  Identities=8%  Similarity=0.033  Sum_probs=47.9

Q ss_pred             cCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH--HHHHHHh----CcceEEcCCCCCCccHHHHHHHhh
Q 017457          179 AGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK--FEIGKKF----GITDFINPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       179 ~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~--~~~~~~l----ga~~v~~~~~~~~~~~~~~i~~~~  251 (371)
                      -+-+++.+|||+|+ |.+|...+..+...|. +|++++++..+  .+.++.+    +.. ++..+-   .+ .+.+.++.
T Consensus         9 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl---~d-~~~~~~~~   82 (335)
T 1rpn_A            9 HHGSMTRSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGIEGDIQ-YEDGDM---AD-ACSVQRAV   82 (335)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTCGGGEE-EEECCT---TC-HHHHHHHH
T ss_pred             cccccCCeEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCCccccccchhhccccCceE-EEECCC---CC-HHHHHHHH
Confidence            34578899999998 9999999998888898 99999887543  1223322    222 222211   11 22333333


Q ss_pred             CC-CcCEEEECCCC
Q 017457          252 DG-GADYCFECIGL  264 (371)
Q Consensus       252 ~g-g~d~vid~~g~  264 (371)
                      .+ ++|+||++.+.
T Consensus        83 ~~~~~d~Vih~A~~   96 (335)
T 1rpn_A           83 IKAQPQEVYNLAAQ   96 (335)
T ss_dssp             HHHCCSEEEECCSC
T ss_pred             HHcCCCEEEECccc
Confidence            33 68999998874

>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}

Probab=95.31  E-value=0.039  Score=48.45  Aligned_cols=100  Identities=14%  Similarity=0.072  Sum_probs=63.7

Q ss_pred             HHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceE--EcCCCCCCccHHHHHHHhhCC
Q 017457          176 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF--INPATCGDKTVSQVIKEMTDG  253 (371)
Q Consensus       176 ~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v--~~~~~~~~~~~~~~i~~~~~g  253 (371)
                      .....+.++.+||=+|+|. |..+..+++. |+ +|++++.+++.++.+++.-....  .+..+   .+.  .......+
T Consensus        38 l~~l~l~~g~~VLDlGcGt-G~~a~~La~~-g~-~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~---~~~--~~~~~~~~  109 (261)
T 3iv6_A           38 IFLENIVPGSTVAVIGAST-RFLIEKALER-GA-SVTVFDFSQRMCDDLAEALADRCVTIDLLD---ITA--EIPKELAG  109 (261)
T ss_dssp             HHTTTCCTTCEEEEECTTC-HHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHTSSSCCEEEECC---TTS--CCCGGGTT
T ss_pred             HHhcCCCCcCEEEEEeCcc-hHHHHHHHhc-CC-EEEEEECCHHHHHHHHHHHHhccceeeeee---ccc--ccccccCC
Confidence            3456788999999999876 7788888874 77 99999999999988876432211  11111   000  00001123


Q ss_pred             CcCEEEECCC-----C---hHHHHHHHHHhhcCCceEEEE
Q 017457          254 GADYCFECIG-----L---TSVMNDAFNSSREGWGKTVIL  285 (371)
Q Consensus       254 g~d~vid~~g-----~---~~~~~~~~~~l~~~~G~~v~~  285 (371)
                      .||+|+....     .   ...+..+.+.+ |+ |+++..
T Consensus       110 ~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PG-G~l~lS  147 (261)
T 3iv6_A          110 HFDFVLNDRLINRFTTEEARRACLGMLSLV-GS-GTVRAS  147 (261)
T ss_dssp             CCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TT-SEEEEE
T ss_pred             CccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cC-cEEEEE
Confidence            7999985422     1   12466777788 97 987754

>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18

Probab=95.30  E-value=0.097  Score=46.50  Aligned_cols=97  Identities=14%  Similarity=0.103  Sum_probs=66.3

Q ss_pred             CCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCc---ceEEcCCCCCCccHHHHHHHhhC
Q 017457          180 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI---TDFINPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       180 ~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga---~~v~~~~~~~~~~~~~~i~~~~~  252 (371)
                      .+.++.+||-+|+|. |..+..+++..|+ +|++++.+++..+.+++    .|.   -.++..+-   .++     .+..
T Consensus        79 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~~-----~~~~  148 (297)
T 2o57_A           79 VLQRQAKGLDLGAGY-GGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSF---LEI-----PCED  148 (297)
T ss_dssp             CCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCT---TSC-----SSCT
T ss_pred             CCCCCCEEEEeCCCC-CHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCc---ccC-----CCCC
Confidence            778999999999874 7788888887788 99999999987776654    232   12222211   111     1122


Q ss_pred             CCcCEEEECCCC------hHHHHHHHHHhhcCCceEEEECc
Q 017457          253 GGADYCFECIGL------TSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       253 gg~d~vid~~g~------~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      +.+|+|+....-      ...+..+.+.|+++ |.++....
T Consensus       149 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  188 (297)
T 2o57_A          149 NSYDFIWSQDAFLHSPDKLKVFQECARVLKPR-GVMAITDP  188 (297)
T ss_dssp             TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCEeEEEecchhhhcCCHHHHHHHHHHHcCCC-eEEEEEEe
Confidence            379999854321      33478899999998 99887753

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=95.30  E-value=0.1  Score=43.62  Aligned_cols=97  Identities=8%  Similarity=0.021  Sum_probs=61.8

Q ss_pred             HcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh-Cc-----------------ceEEcCCCCC
Q 017457          178 VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GI-----------------TDFINPATCG  239 (371)
Q Consensus       178 ~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l-ga-----------------~~v~~~~~~~  239 (371)
                      ...+.++.+||.+|+|. |..+..+++. |+ +|++++.+++..+.+++. +.                 -.++..+-  
T Consensus        17 ~l~~~~~~~vLD~GCG~-G~~~~~la~~-g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~--   91 (203)
T 1pjz_A           17 SLNVVPGARVLVPLCGK-SQDMSWLSGQ-GY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF--   91 (203)
T ss_dssp             HHCCCTTCEEEETTTCC-SHHHHHHHHH-CC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC--
T ss_pred             hcccCCCCEEEEeCCCC-cHhHHHHHHC-CC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECcc--
Confidence            34567899999999876 6777778875 88 999999999988887653 11                 11221111  


Q ss_pred             CccHHHHHHHhhCCCcCEEEECCC-----Ch---HHHHHHHHHhhcCCceEEEE
Q 017457          240 DKTVSQVIKEMTDGGADYCFECIG-----LT---SVMNDAFNSSREGWGKTVIL  285 (371)
Q Consensus       240 ~~~~~~~i~~~~~gg~d~vid~~g-----~~---~~~~~~~~~l~~~~G~~v~~  285 (371)
                       .++...  .  .+.||+|++...     ..   ..++.+.+.|+|+ |+++.+
T Consensus        92 -~~l~~~--~--~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~Lkpg-G~~~l~  139 (203)
T 1pjz_A           92 -FALTAR--D--IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQA-CSGLLI  139 (203)
T ss_dssp             -SSSTHH--H--HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSE-EEEEEE
T ss_pred             -ccCCcc--c--CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCC-cEEEEE
Confidence             111110  0  026999996322     11   2367888999998 984433

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=95.30  E-value=0.077  Score=51.05  Aligned_cols=84  Identities=15%  Similarity=0.122  Sum_probs=51.9

Q ss_pred             CCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH-------HHHHHHhCcce-EEcCCCCCCccHHHHHHHhh
Q 017457          181 VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-------FEIGKKFGITD-FINPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       181 ~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~-------~~~~~~lga~~-v~~~~~~~~~~~~~~i~~~~  251 (371)
                      +++++++||+|+ |++|...+..+...|+++|+.+.++...       .+.++..|... ++.-+-.+.....+.+....
T Consensus       223 ~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~  302 (486)
T 2fr1_A          223 WKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIG  302 (486)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHH
Confidence            567899999998 9999998888877898668888887641       12334456432 22221101122223333331


Q ss_pred             C-CCcCEEEECCCC
Q 017457          252 D-GGADYCFECIGL  264 (371)
Q Consensus       252 ~-gg~d~vid~~g~  264 (371)
                      . +.+|.||++.|.
T Consensus       303 ~~g~ld~VIh~AG~  316 (486)
T 2fr1_A          303 DDVPLSAVFHAAAT  316 (486)
T ss_dssp             TTSCEEEEEECCCC
T ss_pred             hcCCCcEEEECCcc
Confidence            1 268999998873

>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}

Probab=95.29  E-value=0.13  Score=48.15  Aligned_cols=133  Identities=14%  Similarity=0.063  Sum_probs=82.0

Q ss_pred             CeEEEEcCChHHHHHHHHHHHc---------CCCeEEEEcCChhHHHH-HHHhCcceEEcCCCCCCccHHHHHHHhhCCC
Q 017457          185 STVAIFGLGAVGLAVAEGARLN---------RASKIIGVDINPEKFEI-GKKFGITDFINPATCGDKTVSQVIKEMTDGG  254 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la~~~---------g~~~Vi~~~~~~~~~~~-~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg  254 (371)
                      =+|.|+|+|.+|...+...+..         +++-|-+.++++++.+. ++++|...++       .++.+.+.+   ..
T Consensus        27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y-------~d~~~ll~~---~~   96 (412)
T 4gqa_A           27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAY-------GDWRELVND---PQ   96 (412)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEE-------SSHHHHHHC---TT
T ss_pred             ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEE-------CCHHHHhcC---CC
Confidence            4789999999998766555433         45234445677777655 5668887665       244444332   27


Q ss_pred             cCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecC-HHHH---hc--CceEEEeeccCCCchhhHHHHHHHH
Q 017457          255 ADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLN-SIEI---LK--GRSVCGTYFGGLKPRSDIATLAQKY  328 (371)
Q Consensus       255 ~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~-~~~~---~~--~~~~~g~~~~~~~~~~~~~~~~~~~  328 (371)
                      +|+|+-|++.......+..+|..  |.=|++.-+...   +.. ...+   -.  +..+.-.  .+++....++++.+++
T Consensus        97 vD~V~I~tp~~~H~~~~~~al~a--GkhVl~EKP~a~---~~~ea~~l~~~a~~~g~~~~v~--~~~R~~p~~~~~k~~i  169 (412)
T 4gqa_A           97 VDVVDITSPNHLHYTMAMAAIAA--GKHVYCEKPLAV---NEQQAQEMAQAARRAGVKTMVA--FNNIKTPAALLAKQII  169 (412)
T ss_dssp             CCEEEECSCGGGHHHHHHHHHHT--TCEEEEESCSCS---SHHHHHHHHHHHHHHTCCEEEE--CGGGTSHHHHHHHHHH
T ss_pred             CCEEEECCCcHHHHHHHHHHHHc--CCCeEeecCCcC---CHHHHHHHHHHHHHhCCeeeec--cceecCHHHHHHHHHH
Confidence            99999999988778899999987  566667542211   111 1111   11  3333322  2233346788888999


Q ss_pred             HcCCCC
Q 017457          329 LDKELN  334 (371)
Q Consensus       329 ~~g~~~  334 (371)
                      ++|.+-
T Consensus       170 ~~G~iG  175 (412)
T 4gqa_A          170 ARGDIG  175 (412)
T ss_dssp             HHTTTC
T ss_pred             hcCCcC
Confidence            998663

>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17

Probab=95.29  E-value=0.051  Score=49.10  Aligned_cols=98  Identities=18%  Similarity=0.169  Sum_probs=63.3

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh------Cc--ceEEcCCCCCCccHHHHHHHhhCC
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF------GI--TDFINPATCGDKTVSQVIKEMTDG  253 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l------ga--~~v~~~~~~~~~~~~~~i~~~~~g  253 (371)
                      .++++||++|+|. |..+..+++..+..+|++++.+++-.+.+++.      +.  ..+ ....   .+..+.+.. ..+
T Consensus       107 ~~~~~VLdIG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv-~~~~---~D~~~~l~~-~~~  180 (314)
T 2b2c_A          107 PDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKL-DLFC---GDGFEFLKN-HKN  180 (314)
T ss_dssp             SSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTE-EEEC---SCHHHHHHH-CTT
T ss_pred             CCCCEEEEEcCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCE-EEEE---ChHHHHHHh-cCC
Confidence            4568999999865 66677777765444999999999988887763      11  111 1111   344444433 334


Q ss_pred             CcCEEEECCCC----------hHHHHHHHHHhhcCCceEEEEC
Q 017457          254 GADYCFECIGL----------TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       254 g~d~vid~~g~----------~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      .||+|+.....          ...++.+.+.|+++ |.++.-.
T Consensus       181 ~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~Lkpg-G~lv~~~  222 (314)
T 2b2c_A          181 EFDVIITDSSDPVGPAESLFGQSYYELLRDALKED-GILSSQG  222 (314)
T ss_dssp             CEEEEEECCC-------------HHHHHHHHEEEE-EEEEEEC
T ss_pred             CceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCC-eEEEEEC
Confidence            89999843311          24478889999998 9888754

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=95.28  E-value=0.091  Score=50.64  Aligned_cols=84  Identities=13%  Similarity=0.155  Sum_probs=51.5

Q ss_pred             CCCC--CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-------HHHHHHHhCcceE-EcCCCCCCccHHHHHHH
Q 017457          181 VEVG--STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE-------KFEIGKKFGITDF-INPATCGDKTVSQVIKE  249 (371)
Q Consensus       181 ~~~g--~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~-------~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~  249 (371)
                      ++++  +++||+|+ |++|...+..+...|+++|+.+.++..       ..+.+++.|.... +.-+-.+.....+.+.+
T Consensus       234 ~~~~~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~  313 (496)
T 3mje_A          234 KRPPVHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAE  313 (496)
T ss_dssp             CCCCCCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             CCCCCCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence            3455  89999987 999999888888889878888877532       1233445665422 22111011223333333


Q ss_pred             hhC-CCcCEEEECCCC
Q 017457          250 MTD-GGADYCFECIGL  264 (371)
Q Consensus       250 ~~~-gg~d~vid~~g~  264 (371)
                      ... +.+|++|++.|.
T Consensus       314 i~~~g~ld~vVh~AGv  329 (496)
T 3mje_A          314 LPEDAPLTAVFHSAGV  329 (496)
T ss_dssp             CCTTSCEEEEEECCCC
T ss_pred             HHHhCCCeEEEECCcc
Confidence            322 278999998874

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=95.25  E-value=0.011  Score=53.95  Aligned_cols=79  Identities=16%  Similarity=0.146  Sum_probs=45.7

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH----HHHHHHhC------cc-eEEcCCCCCCccHHHHHHHhh
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK----FEIGKKFG------IT-DFINPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~----~~~~~~lg------a~-~v~~~~~~~~~~~~~~i~~~~  251 (371)
                      +++|||+|+ |++|.+.+..+...|+ +|+.+.++.++    .+.++..+      .. .++..+-.+..++.+.+.+..
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~-~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPS-QSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTT-CCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-ceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            678999998 9999999999888998 66666543322    12222221      21 222221101122333333333


Q ss_pred             CCCcCEEEECCC
Q 017457          252 DGGADYCFECIG  263 (371)
Q Consensus       252 ~gg~d~vid~~g  263 (371)
                      .+.+|+++++.|
T Consensus        81 ~g~iD~lVnnAG   92 (327)
T 1jtv_A           81 EGRVDVLVCNAG   92 (327)
T ss_dssp             TSCCSEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence            347999999886

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=95.25  E-value=0.027  Score=49.65  Aligned_cols=94  Identities=18%  Similarity=0.276  Sum_probs=62.4

Q ss_pred             cccchhhhHHHHHHHcCCCCCCeEEEEcCC-hHHHHHHHHHHHc--CCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCC
Q 017457          164 LSCGVSTGVGAAWKVAGVEVGSTVAIFGLG-AVGLAVAEGARLN--RASKIIGVDINPEKFEIGKKFGITDFINPATCGD  240 (371)
Q Consensus       164 ~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g-~~G~~ai~la~~~--g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~  240 (371)
                      +||....+...+.+..---.|++++|+|.| .+|..+++++...  |+ +|+++.+..                      
T Consensus       138 ~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~a-tVtv~h~~t----------------------  194 (281)
T 2c2x_A          138 LPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENA-TVTLCHTGT----------------------  194 (281)
T ss_dssp             CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCC-EEEEECTTC----------------------
T ss_pred             CCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCC-EEEEEECch----------------------
Confidence            444444444333222224579999999997 5799999999988  88 888875332                      


Q ss_pred             ccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECcc
Q 017457          241 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       241 ~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      .++.+.++     .+|+||.++|.+..+.  -+.++++ ..++++|..
T Consensus       195 ~~L~~~~~-----~ADIVI~Avg~p~~I~--~~~vk~G-avVIDVgi~  234 (281)
T 2c2x_A          195 RDLPALTR-----QADIVVAAVGVAHLLT--ADMVRPG-AAVIDVGVS  234 (281)
T ss_dssp             SCHHHHHT-----TCSEEEECSCCTTCBC--GGGSCTT-CEEEECCEE
T ss_pred             hHHHHHHh-----hCCEEEECCCCCcccC--HHHcCCC-cEEEEccCC
Confidence            23333332     5899999999876222  2346786 899999874

>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}

Probab=95.23  E-value=0.13  Score=47.24  Aligned_cols=134  Identities=14%  Similarity=0.137  Sum_probs=80.4

Q ss_pred             CeEEEEcCChHHHHHHHHHHHc-CCCeEE-EEcCChhHHHHH-HHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          185 STVAIFGLGAVGLAVAEGARLN-RASKII-GVDINPEKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la~~~-g~~~Vi-~~~~~~~~~~~~-~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      -+|.|+|.|.+|...+...+.. ++ +++ +.++++++.+.+ +++|+.. +       .++.+.+.   ...+|+|+.|
T Consensus         6 ~~vgiiG~G~~g~~~~~~l~~~~~~-~lvav~d~~~~~~~~~~~~~g~~~-~-------~~~~~~l~---~~~~D~V~i~   73 (354)
T 3db2_A            6 VGVAAIGLGRWAYVMADAYTKSEKL-KLVTCYSRTEDKREKFGKRYNCAG-D-------ATMEALLA---REDVEMVIIT   73 (354)
T ss_dssp             EEEEEECCSHHHHHHHHHHTTCSSE-EEEEEECSSHHHHHHHHHHHTCCC-C-------SSHHHHHH---CSSCCEEEEC
T ss_pred             ceEEEEccCHHHHHHHHHHHhCCCc-EEEEEECCCHHHHHHHHHHcCCCC-c-------CCHHHHhc---CCCCCEEEEe
Confidence            4789999999998877766655 77 554 567787776654 5567643 1       23433332   2279999999


Q ss_pred             CCChHHHHHHHHHhhcCCceEEEECccCCCCceec-CHHHHhc--CceEEEeeccCCCchhhHHHHHHHHHcCCCC
Q 017457          262 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISL-NSIEILK--GRSVCGTYFGGLKPRSDIATLAQKYLDKELN  334 (371)
Q Consensus       262 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~-~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~  334 (371)
                      ++.......+..++..+  .-+++..+........ .......  +..+.-.  .+++....++.+.+++++|.+-
T Consensus        74 tp~~~h~~~~~~al~~g--k~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~--~~~R~~p~~~~~k~~i~~g~iG  145 (354)
T 3db2_A           74 VPNDKHAEVIEQCARSG--KHIYVEKPISVSLDHAQRIDQVIKETGVKFLCG--HSSRRLGALRKMKEMIDTKEIG  145 (354)
T ss_dssp             SCTTSHHHHHHHHHHTT--CEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEE--CGGGGSHHHHHHHHHHHTTTTC
T ss_pred             CChHHHHHHHHHHHHcC--CEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEe--echhcCHHHHHHHHHHhcCCCC
Confidence            99887788888888874  4455643211110000 0111111  3333322  2233346788888999998663

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=95.23  E-value=0.035  Score=48.79  Aligned_cols=78  Identities=10%  Similarity=0.233  Sum_probs=49.4

Q ss_pred             CCCeEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChhH-HHHH-HHhCcc-eE--EcCCCCCCccHHHHHHHh---h
Q 017457          183 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINPEK-FEIG-KKFGIT-DF--INPATCGDKTVSQVIKEM---T  251 (371)
Q Consensus       183 ~g~~VLI~G~---g~~G~~ai~la~~~g~~~Vi~~~~~~~~-~~~~-~~lga~-~v--~~~~~~~~~~~~~~i~~~---~  251 (371)
                      +++++||+|+   |++|.+.++.+...|+ +|+++++++++ .+.+ ++++.. ..  .|-.+  .++..+.+.+.   .
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~   82 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQN--EEHLASLAGRVTEAI   82 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHhcCCCceEEEccCCC--HHHHHHHHHHHHHHh
Confidence            5789999984   8999999998888999 89999988765 2433 334432 12  23222  12222222222   2


Q ss_pred             C--CCcCEEEECCC
Q 017457          252 D--GGADYCFECIG  263 (371)
Q Consensus       252 ~--gg~d~vid~~g  263 (371)
                      +  +++|+++++.|
T Consensus        83 g~~~~iD~lv~nAg   96 (269)
T 2h7i_A           83 GAGNKLDGVVHSIG   96 (269)
T ss_dssp             CTTCCEEEEEECCC
T ss_pred             CCCCCceEEEECCc
Confidence            2  16899999876

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=95.23  E-value=0.079  Score=47.41  Aligned_cols=92  Identities=12%  Similarity=0.080  Sum_probs=59.5

Q ss_pred             CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCC
Q 017457          185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG  263 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g  263 (371)
                      ++|||+|+ |.+|...+..+...|. +|+++++++.+.+ +.  +.. ++..+    -. .+.+.+... ++|+||++.+
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-~~--~~~-~~~~D----l~-~~~~~~~~~-~~d~Vih~a~   71 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGN-TPIILTRSIGNKA-IN--DYE-YRVSD----YT-LEDLINQLN-DVDAVVHLAA   71 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCC--------CCE-EEECC----CC-HHHHHHHTT-TCSEEEECCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCCCCccc-CC--ceE-EEEcc----cc-HHHHHHhhc-CCCEEEEccc
Confidence            68999998 9999999999999999 9999998855544 33  333 22222    23 455665554 8999999887


Q ss_pred             Ch-------------HHHHHHHHHhhcC-CceEEEECc
Q 017457          264 LT-------------SVMNDAFNSSREG-WGKTVILGV  287 (371)
Q Consensus       264 ~~-------------~~~~~~~~~l~~~-~G~~v~~g~  287 (371)
                      ..             .....+++.+... -.+++.++.
T Consensus        72 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS  109 (311)
T 3m2p_A           72 TRGSQGKISEFHDNEILTQNLYDACYENNISNIVYAST  109 (311)
T ss_dssp             CCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence            42             1234455555543 136887764

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=95.23  E-value=0.19  Score=49.75  Aligned_cols=103  Identities=16%  Similarity=0.159  Sum_probs=62.7

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC-hh-HHHHHHHhCcceEEcCCCC--CCccHHHHHHHhhCCCcCE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN-PE-KFEIGKKFGITDFINPATC--GDKTVSQVIKEMTDGGADY  257 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~-~~-~~~~~~~lga~~v~~~~~~--~~~~~~~~i~~~~~gg~d~  257 (371)
                      .|+++||+|+ +++|.+.++.+...|+ +|++.++. .+ -.+.+++.|...+....+.  +.+.+.+.+.+.. |.+|+
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga-~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~-G~iDi  398 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGA-KVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKY-GTIDI  398 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHH-SCCCE
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCC-EEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhc-CCCCE
Confidence            4788999998 8999999999989999 89888742 22 2334444554433222220  0011222222222 37999


Q ss_pred             EEECCCCh-------------------------HHHHHHHHHhhc-CCceEEEECc
Q 017457          258 CFECIGLT-------------------------SVMNDAFNSSRE-GWGKTVILGV  287 (371)
Q Consensus       258 vid~~g~~-------------------------~~~~~~~~~l~~-~~G~~v~~g~  287 (371)
                      ++++.|..                         ...+.++..|.. ++|+++.+++
T Consensus       399 LVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS  454 (604)
T 2et6_A          399 LVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITS  454 (604)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence            99988731                         024556666643 2389999876

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=95.21  E-value=0.11  Score=45.81  Aligned_cols=85  Identities=15%  Similarity=0.221  Sum_probs=59.7

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcc-eEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCC
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-DFINPATCGDKTVSQVIKEMTDGGADYCFECIGL  264 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~-~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~  264 (371)
                      +|.|+|+|.+|.+.+..+...|. +|++.++++++.+.+.+.|.. .+.+       +.    .+.  ..+|+||-++..
T Consensus         2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~-------~~----~~~--~~~D~vi~av~~   67 (279)
T 2f1k_A            2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAGQ-------DL----SLL--QTAKIIFLCTPI   67 (279)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEES-------CG----GGG--TTCSEEEECSCH
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhCCCCccccC-------CH----HHh--CCCCEEEEECCH
Confidence            58899999999998888888898 899999999998888777753 2221       11    112  268999999986


Q ss_pred             hHHHHHHHHHh----hcCCceEEEEC
Q 017457          265 TSVMNDAFNSS----REGWGKTVILG  286 (371)
Q Consensus       265 ~~~~~~~~~~l----~~~~G~~v~~g  286 (371)
                      .. ....++.+    +++ ..++.++
T Consensus        68 ~~-~~~~~~~l~~~~~~~-~~vv~~~   91 (279)
T 2f1k_A           68 QL-ILPTLEKLIPHLSPT-AIVTDVA   91 (279)
T ss_dssp             HH-HHHHHHHHGGGSCTT-CEEEECC
T ss_pred             HH-HHHHHHHHHhhCCCC-CEEEECC
Confidence            55 44444443    343 4555553

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=95.21  E-value=0.067  Score=52.95  Aligned_cols=101  Identities=16%  Similarity=0.135  Sum_probs=63.8

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh---------hHHHH----HHHhCcceEEcCCCCCCcc---HHH
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP---------EKFEI----GKKFGITDFINPATCGDKT---VSQ  245 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~---------~~~~~----~~~lga~~v~~~~~~~~~~---~~~  245 (371)
                      .|+++||+|+ +++|.+.+..+...|+ +|++++++.         ++.+.    +++.|...+.|..+  ..+   +.+
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga-~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d--~~~~~~~v~   83 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGA-KVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNN--VLDGDKIVE   83 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECC-----------CHHHHHHHHHHHTTCEEEEECCC--TTCHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCC--HHHHHHHHH
Confidence            5788999998 8999999999989999 899987654         33332    23345444455433  122   223


Q ss_pred             HHHHhhCCCcCEEEECCCCh-------------------------HHHHHHHHHhhc-CCceEEEECc
Q 017457          246 VIKEMTDGGADYCFECIGLT-------------------------SVMNDAFNSSRE-GWGKTVILGV  287 (371)
Q Consensus       246 ~i~~~~~gg~d~vid~~g~~-------------------------~~~~~~~~~l~~-~~G~~v~~g~  287 (371)
                      .+.+.. |.+|+++++.|..                         ...+.+++.|.. ++|++|.+++
T Consensus        84 ~~~~~~-G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS  150 (604)
T 2et6_A           84 TAVKNF-GTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSS  150 (604)
T ss_dssp             HHHHHH-SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             HHHHHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence            332222 3799999988731                         024556666643 2389999875

>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*

Probab=95.18  E-value=0.15  Score=46.71  Aligned_cols=134  Identities=8%  Similarity=0.078  Sum_probs=78.7

Q ss_pred             CeEEEEcCChHHH-HHHHHHHHc-CCCeEE-EEcCChhHHHH-HHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          185 STVAIFGLGAVGL-AVAEGARLN-RASKII-GVDINPEKFEI-GKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       185 ~~VLI~G~g~~G~-~ai~la~~~-g~~~Vi-~~~~~~~~~~~-~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      -+|.|+|+|.+|. ..+..++.. ++ +++ +.++++++.+. ++++|+..+        .++.+.+.   ...+|+|+.
T Consensus        28 ~rigiIG~G~~g~~~~~~~l~~~~~~-~l~av~d~~~~~~~~~a~~~g~~~~--------~~~~~ll~---~~~~D~V~i   95 (350)
T 3rc1_A           28 IRVGVIGCADIAWRRALPALEAEPLT-EVTAIASRRWDRAKRFTERFGGEPV--------EGYPALLE---RDDVDAVYV   95 (350)
T ss_dssp             EEEEEESCCHHHHHTHHHHHHHCTTE-EEEEEEESSHHHHHHHHHHHCSEEE--------ESHHHHHT---CTTCSEEEE
T ss_pred             eEEEEEcCcHHHHHHHHHHHHhCCCe-EEEEEEcCCHHHHHHHHHHcCCCCc--------CCHHHHhc---CCCCCEEEE
Confidence            4789999999998 555555555 77 555 55777776654 455777543        13322221   127999999


Q ss_pred             CCCChHHHHHHHHHhhcCCceEEEECccCCCCceec-CHHHHhc--CceEEEeeccCCCchhhHHHHHHHHHcCCCC
Q 017457          261 CIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISL-NSIEILK--GRSVCGTYFGGLKPRSDIATLAQKYLDKELN  334 (371)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~-~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~  334 (371)
                      |+......+.+..++..  |.-+++..+........ .......  +..+.-..  .++....++.+.+++++|.+-
T Consensus        96 ~tp~~~h~~~~~~al~a--Gk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~--~~R~~p~~~~~k~~i~~G~iG  168 (350)
T 3rc1_A           96 PLPAVLHAEWIDRALRA--GKHVLAEKPLTTDRPQAERLFAVARERGLLLMENF--MFLHHPQHRQVADMLDEGVIG  168 (350)
T ss_dssp             CCCGGGHHHHHHHHHHT--TCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEEC--GGGGCTHHHHHHHHHHTTTTC
T ss_pred             CCCcHHHHHHHHHHHHC--CCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEe--cccCCHHHHHHHHHHhcCCCC
Confidence            99988778888888887  45566653211110000 0111112  33333222  222235678888999988663

>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5

Probab=95.15  E-value=0.22  Score=45.42  Aligned_cols=133  Identities=11%  Similarity=0.032  Sum_probs=80.1

Q ss_pred             CeEEEEcCC-hHHHHHHHHHHHc--CCCeEEEEcCChhHHHH-HHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          185 STVAIFGLG-AVGLAVAEGARLN--RASKIIGVDINPEKFEI-GKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       185 ~~VLI~G~g-~~G~~ai~la~~~--g~~~Vi~~~~~~~~~~~-~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      -+|.|+|+| .+|...+...+..  +++-+.+.++++++.+. ++++|...++       .++.+.+.+   ..+|+|+.
T Consensus        19 irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~-------~~~~~ll~~---~~vD~V~i   88 (340)
T 1zh8_A           19 IRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVF-------DSYEELLES---GLVDAVDL   88 (340)
T ss_dssp             EEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEE-------SCHHHHHHS---SCCSEEEE
T ss_pred             eeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCccc-------CCHHHHhcC---CCCCEEEE
Confidence            478899999 7888766666655  56334556777777655 4557764454       234333321   27999999


Q ss_pred             CCCChHHHHHHHHHhhcCCceEEEECccCCCCceecC-HHHH---hc--CceEEEeeccCCCchhhHHHHHHHHHcCCCC
Q 017457          261 CIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLN-SIEI---LK--GRSVCGTYFGGLKPRSDIATLAQKYLDKELN  334 (371)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~-~~~~---~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~  334 (371)
                      +++.....+.+..++..  |.=|++.-+..   .+.. ...+   -.  +..+.-..  +++....++.+.+++++|.+-
T Consensus        89 ~tp~~~H~~~~~~al~a--GkhVl~EKPla---~~~~ea~~l~~~a~~~g~~~~v~~--~~R~~p~~~~~k~~i~~g~iG  161 (340)
T 1zh8_A           89 TLPVELNLPFIEKALRK--GVHVICEKPIS---TDVETGKKVVELSEKSEKTVYIAE--NFRHVPAFWKAKELVESGAIG  161 (340)
T ss_dssp             CCCGGGHHHHHHHHHHT--TCEEEEESSSS---SSHHHHHHHHHHHHHCSSCEEEEC--GGGGCHHHHHHHHHHHTTTTS
T ss_pred             eCCchHHHHHHHHHHHC--CCcEEEeCCCC---CCHHHHHHHHHHHHHcCCeEEEEe--cccCCHHHHHHHHHHhcCCCC
Confidence            99987768888888887  55566653211   1111 1111   11  33333222  233346688888999988653

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=95.15  E-value=0.087  Score=46.91  Aligned_cols=92  Identities=13%  Similarity=0.118  Sum_probs=58.3

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-------hHHHHHH---HhCcceEE-cCCCCCCccHHHHHHHhh
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP-------EKFEIGK---KFGITDFI-NPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~-------~~~~~~~---~lga~~v~-~~~~~~~~~~~~~i~~~~  251 (371)
                      +++|||+|+ |.+|...+..+...|. +|+++++++       ++.+.++   ..++..+. |..+      .+.+.+..
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d------~~~l~~~~   74 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGN-PTYALVRKTITAANPETKEELIDNYQSLGVILLEGDIND------HETLVKAI   74 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTC-CEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTC------HHHHHHHH
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCC-cEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCC------HHHHHHHH
Confidence            467999998 9999999988888898 888888876       5544433   23544332 3222      23344433


Q ss_pred             CCCcCEEEECCCCh--HHHHHHHHHhhcC--CceEE
Q 017457          252 DGGADYCFECIGLT--SVMNDAFNSSREG--WGKTV  283 (371)
Q Consensus       252 ~gg~d~vid~~g~~--~~~~~~~~~l~~~--~G~~v  283 (371)
                      . ++|+||++.+..  .....+++.+...  -.+++
T Consensus        75 ~-~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  109 (307)
T 2gas_A           75 K-QVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFF  109 (307)
T ss_dssp             T-TCSEEEECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred             h-CCCEEEECCcccccccHHHHHHHHHhcCCceEEe
Confidence            3 699999998752  2234555555543  13665

>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41

Probab=95.14  E-value=0.085  Score=45.88  Aligned_cols=100  Identities=16%  Similarity=0.330  Sum_probs=66.0

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh----Ccc--eEEcCCCCCCccHHHHHH
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GIT--DFINPATCGDKTVSQVIK  248 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l----ga~--~v~~~~~~~~~~~~~~i~  248 (371)
                      +.......++.+||-+|+|. |..+..+++.. . +|++++.+++..+.+++.    |..  .++..+-   .++     
T Consensus        29 l~~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~-~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~---~~l-----   97 (260)
T 1vl5_A           29 LMQIAALKGNEEVLDVATGG-GHVANAFAPFV-K-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDA---EQM-----   97 (260)
T ss_dssp             HHHHHTCCSCCEEEEETCTT-CHHHHHHGGGS-S-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC----CC-----
T ss_pred             HHHHhCCCCCCEEEEEeCCC-CHHHHHHHHhC-C-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecH---HhC-----
Confidence            34455678899999999873 77777777654 4 999999999887776553    322  2222111   111     


Q ss_pred             HhhCCCcCEEEECCCC------hHHHHHHHHHhhcCCceEEEEC
Q 017457          249 EMTDGGADYCFECIGL------TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       249 ~~~~gg~d~vid~~g~------~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      .+..+.||+|+....-      ...+..+.+.|+++ |.++...
T Consensus        98 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~l~~~~  140 (260)
T 1vl5_A           98 PFTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKG-GQLLLVD  140 (260)
T ss_dssp             CSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CCCCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCC-CEEEEEE
Confidence            1122379999965332      23578899999998 9988764

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=95.14  E-value=0.071  Score=49.58  Aligned_cols=85  Identities=19%  Similarity=0.225  Sum_probs=50.3

Q ss_pred             cCC-CCCCeEEEEcC-ChHHHHHHHHHHH-cCCCeEEEEcCChhH----------------HHHHHHhCcce-EEcCCCC
Q 017457          179 AGV-EVGSTVAIFGL-GAVGLAVAEGARL-NRASKIIGVDINPEK----------------FEIGKKFGITD-FINPATC  238 (371)
Q Consensus       179 ~~~-~~g~~VLI~G~-g~~G~~ai~la~~-~g~~~Vi~~~~~~~~----------------~~~~~~lga~~-v~~~~~~  238 (371)
                      ..+ ..++++||+|+ +++|.+.+..+.. .|+ +|++++++.+.                .+.+++.|... .+.-+-.
T Consensus        41 ~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA-~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvt  119 (405)
T 3zu3_A           41 GPIANGPKRVLVIGASTGYGLAARITAAFGCGA-DTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAF  119 (405)
T ss_dssp             CCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred             CCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCC-EEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCC
Confidence            344 55788899997 8999997777777 899 88888754332                12344556432 2222211


Q ss_pred             CCccHHHHHHHhhC--CCcCEEEECCCC
Q 017457          239 GDKTVSQVIKEMTD--GGADYCFECIGL  264 (371)
Q Consensus       239 ~~~~~~~~i~~~~~--gg~d~vid~~g~  264 (371)
                      +.+...+.+.....  |++|+++++.|.
T Consensus       120 d~~~v~~~v~~i~~~~G~IDiLVNNAG~  147 (405)
T 3zu3_A          120 SDEIKQLTIDAIKQDLGQVDQVIYSLAS  147 (405)
T ss_dssp             SHHHHHHHHHHHHHHTSCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEEcCcc
Confidence            11222222332221  379999998775

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=95.12  E-value=0.11  Score=47.36  Aligned_cols=94  Identities=16%  Similarity=0.084  Sum_probs=59.2

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh----hHHHHHHH---hCcceEEcCCCCCCccHHHHHHHhhCC-C
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP----EKFEIGKK---FGITDFINPATCGDKTVSQVIKEMTDG-G  254 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~----~~~~~~~~---lga~~v~~~~~~~~~~~~~~i~~~~~g-g  254 (371)
                      ..+|||+|+ |.+|...+..+...|. +|+++++++    ++.+.++.   .++..+ ..+-   .+ .+.+.+.... +
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~-~~Dl---~d-~~~l~~~~~~~~   83 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHR-PTYILARPGPRSPSKAKIFKALEDKGAIIV-YGLI---NE-QEAMEKILKEHE   83 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTC-CEEEEECSSCCCHHHHHHHHHHHHTTCEEE-ECCT---TC-HHHHHHHHHHTT
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCC-CEEEEECCCCCChhHHHHHHHHHhCCcEEE-Eeec---CC-HHHHHHHHhhCC
Confidence            358999998 9999999999988898 899998866    45544333   344433 2222   12 2233333322 7


Q ss_pred             cCEEEECCCChH--HHHHHHHHhhcCCc---eEEE
Q 017457          255 ADYCFECIGLTS--VMNDAFNSSREGWG---KTVI  284 (371)
Q Consensus       255 ~d~vid~~g~~~--~~~~~~~~l~~~~G---~~v~  284 (371)
                      +|+||++.+...  ....+++.+... |   +++.
T Consensus        84 ~d~Vi~~a~~~n~~~~~~l~~aa~~~-g~v~~~v~  117 (346)
T 3i6i_A           84 IDIVVSTVGGESILDQIALVKAMKAV-GTIKRFLP  117 (346)
T ss_dssp             CCEEEECCCGGGGGGHHHHHHHHHHH-CCCSEEEC
T ss_pred             CCEEEECCchhhHHHHHHHHHHHHHc-CCceEEee
Confidence            999999988532  234566666654 4   5553

>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}

Probab=95.09  E-value=0.051  Score=45.50  Aligned_cols=96  Identities=10%  Similarity=0.093  Sum_probs=64.1

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCc----ceEEcCCCCCCccHHHHHHHhhCCCcC
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI----TDFINPATCGDKTVSQVIKEMTDGGAD  256 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga----~~v~~~~~~~~~~~~~~i~~~~~gg~d  256 (371)
                      +.++.+||-+|+|. |..+..+++. |..+|++++.++...+.+++...    -.++..+-   .++     ....+.+|
T Consensus        40 ~~~~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~---~~~-----~~~~~~fD  109 (215)
T 2pxx_A           40 LRPEDRILVLGCGN-SALSYELFLG-GFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDV---RKL-----DFPSASFD  109 (215)
T ss_dssp             CCTTCCEEEETCTT-CSHHHHHHHT-TCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCT---TSC-----CSCSSCEE
T ss_pred             cCCCCeEEEECCCC-cHHHHHHHHc-CCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcch---hcC-----CCCCCccc
Confidence            57889999999876 7777777776 44489999999998888876432    12222211   111     12233799


Q ss_pred             EEEECCC---------------------ChHHHHHHHHHhhcCCceEEEECc
Q 017457          257 YCFECIG---------------------LTSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       257 ~vid~~g---------------------~~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      +|+....                     -...+..+.+.|+++ |+++....
T Consensus       110 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~  160 (215)
T 2pxx_A          110 VVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPG-GRFISMTS  160 (215)
T ss_dssp             EEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEE-EEEEEEES
T ss_pred             EEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCC-CEEEEEeC
Confidence            9995321                     123477888999998 99888754

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=95.08  E-value=0.054  Score=47.26  Aligned_cols=34  Identities=26%  Similarity=0.277  Sum_probs=30.1

Q ss_pred             CCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457          184 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  217 (371)
Q Consensus       184 g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~  217 (371)
                      +.+|+|+|+|++|..++..+...|..++++++..
T Consensus        28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d   61 (251)
T 1zud_1           28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD   61 (251)
T ss_dssp             TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred             cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            5789999999999999999999999888888653

>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}

Probab=95.06  E-value=0.13  Score=46.47  Aligned_cols=93  Identities=14%  Similarity=0.145  Sum_probs=63.1

Q ss_pred             CeEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHHh-Cc---c--eEEcCCCCCCccHHHHHHHhhCCCcCE
Q 017457          185 STVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKF-GI---T--DFINPATCGDKTVSQVIKEMTDGGADY  257 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~l-ga---~--~v~~~~~~~~~~~~~~i~~~~~gg~d~  257 (371)
                      .+||++|+|. |.++..+++.. +. +|++++.+++-.+.+++. +.   .  .++.      .+..+.+.+...+.||+
T Consensus        91 ~rVLdIG~G~-G~la~~la~~~p~~-~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~------~Da~~~l~~~~~~~fDv  162 (317)
T 3gjy_A           91 LRITHLGGGA-CTMARYFADVYPQS-RNTVVELDAELARLSREWFDIPRAPRVKIRV------DDARMVAESFTPASRDV  162 (317)
T ss_dssp             CEEEEESCGG-GHHHHHHHHHSTTC-EEEEEESCHHHHHHHHHHSCCCCTTTEEEEE------SCHHHHHHTCCTTCEEE
T ss_pred             CEEEEEECCc-CHHHHHHHHHCCCc-EEEEEECCHHHHHHHHHhccccCCCceEEEE------CcHHHHHhhccCCCCCE
Confidence            3899999865 67777888854 67 999999999988888763 21   1  2221      34444444433448999


Q ss_pred             EEE-CCCC---------hHHHHHHHHHhhcCCceEEEEC
Q 017457          258 CFE-CIGL---------TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       258 vid-~~g~---------~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      ||. ....         ...++.+.+.|+++ |.++.-.
T Consensus       163 Ii~D~~~~~~~~~~L~t~efl~~~~r~Lkpg-Gvlv~~~  200 (317)
T 3gjy_A          163 IIRDVFAGAITPQNFTTVEFFEHCHRGLAPG-GLYVANC  200 (317)
T ss_dssp             EEECCSTTSCCCGGGSBHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             EEECCCCccccchhhhHHHHHHHHHHhcCCC-cEEEEEe
Confidence            984 3221         23478899999998 9877554

>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}

Probab=95.05  E-value=0.19  Score=45.82  Aligned_cols=133  Identities=12%  Similarity=0.099  Sum_probs=79.3

Q ss_pred             CeEEEEcCChHHHHHHHHHHHc-CCCeEE-EEcCChhHHHH-HHHhCcceEEcCCCCCCccHHHHHHHhhCC-CcCEEEE
Q 017457          185 STVAIFGLGAVGLAVAEGARLN-RASKII-GVDINPEKFEI-GKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFE  260 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la~~~-g~~~Vi-~~~~~~~~~~~-~~~lga~~v~~~~~~~~~~~~~~i~~~~~g-g~d~vid  260 (371)
                      -+|.|+|+|.+|...+..++.. ++ +++ +.++++++.+. ++++|+ .++       .++.+    +... .+|+|+.
T Consensus         5 ~rvgiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~a~~~g~-~~~-------~~~~~----~l~~~~~D~V~i   71 (344)
T 3euw_A            5 LRIALFGAGRIGHVHAANIAANPDL-ELVVIADPFIEGAQRLAEANGA-EAV-------ASPDE----VFARDDIDGIVI   71 (344)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHHHTTTC-EEE-------SSHHH----HTTCSCCCEEEE
T ss_pred             eEEEEECCcHHHHHHHHHHHhCCCc-EEEEEECCCHHHHHHHHHHcCC-cee-------CCHHH----HhcCCCCCEEEE
Confidence            3689999999998877766655 67 555 66777777665 455674 333       23322    2233 7999999


Q ss_pred             CCCChHHHHHHHHHhhcCCceEEEECccCCCCcee-cCHHHHhc--CceEEEeeccCCCchhhHHHHHHHHHcCCCC
Q 017457          261 CIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS-LNSIEILK--GRSVCGTYFGGLKPRSDIATLAQKYLDKELN  334 (371)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~-~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~  334 (371)
                      |++.......+..++..+  .-+++..+....... ........  +..+.-..  ..+....+..+.+++++|.+-
T Consensus        72 ~tp~~~h~~~~~~al~~g--k~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~--~~r~~p~~~~~k~~i~~g~iG  144 (344)
T 3euw_A           72 GSPTSTHVDLITRAVERG--IPALCEKPIDLDIEMVRACKEKIGDGASKVMLGF--NRRFDPSFAAINARVANQEIG  144 (344)
T ss_dssp             CSCGGGHHHHHHHHHHTT--CCEEECSCSCSCHHHHHHHHHHHGGGGGGEEECC--GGGGCHHHHHHHHHHHTTTTS
T ss_pred             eCCchhhHHHHHHHHHcC--CcEEEECCCCCCHHHHHHHHHHHHhcCCeEEecc--hhhcCHHHHHHHHHHhcCCCC
Confidence            999888788888888874  445554321111000 00111122  33333222  223345688888999998663

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=95.03  E-value=0.051  Score=49.02  Aligned_cols=114  Identities=14%  Similarity=0.168  Sum_probs=68.6

Q ss_pred             ccccchhhhHHHHHHH--------cC-CCCCCeEEEEcCC-hHHHHHHHHHHHcCCCeEEEEcCChhHH-HHHHHhCcc-
Q 017457          163 LLSCGVSTGVGAAWKV--------AG-VEVGSTVAIFGLG-AVGLAVAEGARLNRASKIIGVDINPEKF-EIGKKFGIT-  230 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~--------~~-~~~g~~VLI~G~g-~~G~~ai~la~~~g~~~Vi~~~~~~~~~-~~~~~lga~-  230 (371)
                      .+||....+...+.+.        .+ --.|++++|+|+| .+|..+++++...|+ +|+++.++..+. ++...++.. 
T Consensus       147 ~~PcTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gA-tVtv~nR~~~~l~~ra~~la~~~  225 (320)
T 1edz_A          147 ILPCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGA-TVYSVDVNNIQKFTRGESLKLNK  225 (320)
T ss_dssp             CCCHHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSC-EEEEECSSEEEEEESCCCSSCCC
T ss_pred             cCCCcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHCCC-EEEEEeCchHHHHhHHHHHhhhc
Confidence            4555555555433331        22 3478999999997 569999999999999 899998764321 112223211 


Q ss_pred             eEE---c-CCCCCCccHHHHHHHhhCCCcCEEEECCCChHH-HHHHHHHhhcCCceEEEECcc
Q 017457          231 DFI---N-PATCGDKTVSQVIKEMTDGGADYCFECIGLTSV-MNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       231 ~v~---~-~~~~~~~~~~~~i~~~~~gg~d~vid~~g~~~~-~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      +..   . ...   .++.+.++     .+|+||.+++.+.. +..  +.++++ ..++++|..
T Consensus       226 ~~~t~~~~t~~---~~L~e~l~-----~ADIVIsAtg~p~~vI~~--e~vk~G-avVIDVgi~  277 (320)
T 1edz_A          226 HHVEDLGEYSE---DLLKKCSL-----DSDVVITGVPSENYKFPT--EYIKEG-AVCINFACT  277 (320)
T ss_dssp             CEEEEEEECCH---HHHHHHHH-----HCSEEEECCCCTTCCBCT--TTSCTT-EEEEECSSS
T ss_pred             ccccccccccH---hHHHHHhc-----cCCEEEECCCCCcceeCH--HHcCCC-eEEEEcCCC
Confidence            000   0 000   12333333     58999999998752 222  236776 788999864

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=95.03  E-value=0.032  Score=55.46  Aligned_cols=79  Identities=19%  Similarity=0.180  Sum_probs=45.8

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC---------ChhHHHH----HHHhCcceEEcCCCCCCccHHHHHH
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI---------NPEKFEI----GKKFGITDFINPATCGDKTVSQVIK  248 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~---------~~~~~~~----~~~lga~~v~~~~~~~~~~~~~~i~  248 (371)
                      .|+++||+|+ +++|.+.+..+...|+ +|+++++         +.++.+.    +++.+...+.|..+  ..+..+.+.
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d--~~~~~~~~~   94 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAERGA-KVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNS--VIDGAKVIE   94 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEC--------------CHHHHHHHHHHTTCCEEECCCC--GGGHHHHHC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCC--HHHHHHHHH
Confidence            5789999998 9999999988888999 8998876         4433332    33345555555444  133333333


Q ss_pred             HhhC--CCcCEEEECCCC
Q 017457          249 EMTD--GGADYCFECIGL  264 (371)
Q Consensus       249 ~~~~--gg~d~vid~~g~  264 (371)
                      +...  +.+|+++++.|.
T Consensus        95 ~~~~~~g~iDiLVnnAGi  112 (613)
T 3oml_A           95 TAIKAFGRVDILVNNAGI  112 (613)
T ss_dssp             ----------CEECCCCC
T ss_pred             HHHHHCCCCcEEEECCCC
Confidence            3322  278999998874

>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}

Probab=95.00  E-value=0.13  Score=46.65  Aligned_cols=135  Identities=13%  Similarity=0.042  Sum_probs=79.5

Q ss_pred             CeEEEEcCChHHHHHHHHHHHc-CCCeEE-EEcCChhHHHH-HHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          185 STVAIFGLGAVGLAVAEGARLN-RASKII-GVDINPEKFEI-GKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la~~~-g~~~Vi-~~~~~~~~~~~-~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      -+|.|+|+|.+|...+..++.. ++ +++ +.++++++.+. ++++|...++       .++.+.+.   ...+|+|+.|
T Consensus         6 ~~igiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~~~~~~~~~~~-------~~~~~ll~---~~~~D~V~i~   74 (330)
T 3e9m_A            6 IRYGIMSTAQIVPRFVAGLRESAQA-EVRGIASRRLENAQKMAKELAIPVAY-------GSYEELCK---DETIDIIYIP   74 (330)
T ss_dssp             EEEEECSCCTTHHHHHHHHHHSSSE-EEEEEBCSSSHHHHHHHHHTTCCCCB-------SSHHHHHH---CTTCSEEEEC
T ss_pred             EEEEEECchHHHHHHHHHHHhCCCc-EEEEEEeCCHHHHHHHHHHcCCCcee-------CCHHHHhc---CCCCCEEEEc
Confidence            3689999999998877766654 66 565 45667776554 4556754333       23433332   1279999999


Q ss_pred             CCChHHHHHHHHHhhcCCceEEEECccCCCCcee-cCHHHHhc--CceEEEeeccCCCchhhHHHHHHHHHcCCCC
Q 017457          262 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS-LNSIEILK--GRSVCGTYFGGLKPRSDIATLAQKYLDKELN  334 (371)
Q Consensus       262 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~-~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~  334 (371)
                      ++.....+.+..++..+  .-+++..+....... -.......  +..+.-.  ...+....++.+.+++++|.+-
T Consensus        75 tp~~~h~~~~~~al~~g--k~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~--~~~r~~p~~~~~k~~i~~g~iG  146 (330)
T 3e9m_A           75 TYNQGHYSAAKLALSQG--KPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEA--QKSVFLPITQKVKATIQEGGLG  146 (330)
T ss_dssp             CCGGGHHHHHHHHHHTT--CCEEECSSCCSSHHHHHHHHHHHHHTTCCEEEC--CSGGGCHHHHHHHHHHHTTTTC
T ss_pred             CCCHHHHHHHHHHHHCC--CeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEE--EhhhhCHHHHHHHHHHhCCCCC
Confidence            99888788888888874  445554321111000 00111122  3333322  2233346688888999998764

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=94.99  E-value=0.04  Score=50.43  Aligned_cols=75  Identities=13%  Similarity=0.071  Sum_probs=48.4

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-h----CcceEEcCCCCCCccHHHHHHHhhCC-Cc
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F----GITDFINPATCGDKTVSQVIKEMTDG-GA  255 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l----ga~~v~~~~~~~~~~~~~~i~~~~~g-g~  255 (371)
                      ++.+|||+|+ |.+|...++.+...|+ +|++++++.++.+.+.+ +    +.. ++..+-   .+ .+.+.++..+ ++
T Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dl---~d-~~~~~~~~~~~~~   81 (357)
T 1rkx_A            8 QGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAPTVPSLFETARVADGMQ-SEIGDI---RD-QNKLLESIREFQP   81 (357)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCSSSSCHHHHTTTTTTSE-EEECCT---TC-HHHHHHHHHHHCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCC-eEEEEeCCCcccchhhHhhccCCceE-EEEccc---cC-HHHHHHHHHhcCC
Confidence            3678999998 9999999998888999 99999887654332221 1    222 222221   11 1233333333 68


Q ss_pred             CEEEECCC
Q 017457          256 DYCFECIG  263 (371)
Q Consensus       256 d~vid~~g  263 (371)
                      |+||++.+
T Consensus        82 d~vih~A~   89 (357)
T 1rkx_A           82 EIVFHMAA   89 (357)
T ss_dssp             SEEEECCS
T ss_pred             CEEEECCC
Confidence            99999987

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=94.96  E-value=0.2  Score=46.02  Aligned_cols=91  Identities=11%  Similarity=0.193  Sum_probs=61.6

Q ss_pred             CCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCC
Q 017457          184 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG  263 (371)
Q Consensus       184 g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g  263 (371)
                      ..+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|+...        .+..+.+...  ..+|+||-+++
T Consensus        22 ~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~g~~~~--------~s~~e~~~~a--~~~DvVi~~vp   90 (358)
T 4e21_A           22 SMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALEREGIAGA--------RSIEEFCAKL--VKPRVVWLMVP   90 (358)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCBCC--------SSHHHHHHHS--CSSCEEEECSC
T ss_pred             CCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCEEe--------CCHHHHHhcC--CCCCEEEEeCC
Confidence            4689999999999998888888998 99999999999888877765311        2333333321  13588888887


Q ss_pred             ChHHHHHHHHH----hhcCCceEEEECc
Q 017457          264 LTSVMNDAFNS----SREGWGKTVILGV  287 (371)
Q Consensus       264 ~~~~~~~~~~~----l~~~~G~~v~~g~  287 (371)
                      ... ....++.    ++++ ..+++.+.
T Consensus        91 ~~~-v~~vl~~l~~~l~~g-~iiId~st  116 (358)
T 4e21_A           91 AAV-VDSMLQRMTPLLAAN-DIVIDGGN  116 (358)
T ss_dssp             GGG-HHHHHHHHGGGCCTT-CEEEECSS
T ss_pred             HHH-HHHHHHHHHhhCCCC-CEEEeCCC
Confidence            763 4444443    3343 45555543

>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}

Probab=94.95  E-value=0.098  Score=46.58  Aligned_cols=45  Identities=20%  Similarity=0.213  Sum_probs=36.7

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK  226 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~  226 (371)
                      ..++++||=+|+|. |..++.+++..+..+|++++.++.-.+.+++
T Consensus        44 ~~~~~~VLDiGCG~-G~~~~~la~~~~~~~v~gvDis~~~i~~A~~   88 (292)
T 3g07_A           44 WFRGRDVLDLGCNV-GHLTLSIACKWGPSRMVGLDIDSRLIHSARQ   88 (292)
T ss_dssp             GTTTSEEEEESCTT-CHHHHHHHHHTCCSEEEEEESCHHHHHHHHH
T ss_pred             hcCCCcEEEeCCCC-CHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence            34688999999875 7888889988764599999999988877765

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=94.93  E-value=0.093  Score=44.64  Aligned_cols=99  Identities=16%  Similarity=0.318  Sum_probs=65.0

Q ss_pred             HcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCc-ceEEcCCCCCCccHHHHHHHhhC
Q 017457          178 VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI-TDFINPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       178 ~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga-~~v~~~~~~~~~~~~~~i~~~~~  252 (371)
                      ...++++++||=+|+|..|..++.+++..+. +|++++.+++..+.+++    .+. -.++..+-   ..+    ..+..
T Consensus        50 ~~~~~~~~~vLDlG~G~~G~~~~~la~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~---~~~----~~~~~  121 (230)
T 3evz_A           50 KTFLRGGEVALEIGTGHTAMMALMAEKFFNC-KVTATEVDEEFFEYARRNIERNNSNVRLVKSNG---GII----KGVVE  121 (230)
T ss_dssp             HTTCCSSCEEEEECCTTTCHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHTTCCCEEEECSS---CSS----TTTCC
T ss_pred             HhhcCCCCEEEEcCCCHHHHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCc---hhh----hhccc
Confidence            3446789999999998558888888887666 99999999988777654    342 22332221   011    11222


Q ss_pred             CCcCEEEECCCC-------------------------hHHHHHHHHHhhcCCceEEEE
Q 017457          253 GGADYCFECIGL-------------------------TSVMNDAFNSSREGWGKTVIL  285 (371)
Q Consensus       253 gg~d~vid~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~  285 (371)
                      +.+|+|+....-                         ...+..+.+.|+++ |+++.+
T Consensus       122 ~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~  178 (230)
T 3evz_A          122 GTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPG-GKVALY  178 (230)
T ss_dssp             SCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEE-EEEEEE
T ss_pred             CceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCC-eEEEEE
Confidence            479999854220                         23467777788887 888765

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=94.93  E-value=0.12  Score=46.10  Aligned_cols=36  Identities=22%  Similarity=0.338  Sum_probs=28.2

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK  220 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~  220 (371)
                      +++|||+|+ |.+|...++.+...|+ +|++++++.++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~   38 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNW-HAVGCGFRRAR   38 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEC-----
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCC-eEEEEccCCCC
Confidence            468999998 9999999998888898 99999876543

>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X

Probab=94.92  E-value=0.23  Score=45.04  Aligned_cols=135  Identities=9%  Similarity=0.035  Sum_probs=79.1

Q ss_pred             eEEEEcCChHHHHHHHHHHHcC---CCeEEEEcCChhHHHH-HHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          186 TVAIFGLGAVGLAVAEGARLNR---ASKIIGVDINPEKFEI-GKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g---~~~Vi~~~~~~~~~~~-~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      ++.|+|.|.+|...+..++...   +.-+.+.++++++.+. ++++|...++       .++.+.+.+   ..+|+|+-+
T Consensus         4 rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~-------~~~~~ll~~---~~vD~V~i~   73 (334)
T 3ohs_X            4 RWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAY-------GSYEELAKD---PNVEVAYVG   73 (334)
T ss_dssp             EEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSCEE-------SSHHHHHHC---TTCCEEEEC
T ss_pred             EEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCCccc-------CCHHHHhcC---CCCCEEEEC
Confidence            6889999999988766665543   3234455677776554 4567765454       234333321   279999999


Q ss_pred             CCChHHHHHHHHHhhcCCceEEEECccCCCCceec-CHHHHhc--CceEEEeeccCCCchhhHHHHHHHHHcCCCC
Q 017457          262 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISL-NSIEILK--GRSVCGTYFGGLKPRSDIATLAQKYLDKELN  334 (371)
Q Consensus       262 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~-~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~  334 (371)
                      ++.....+.+..++..  |.-|++.-+........ .......  +..+.-..  ..+....++++.+++++|.+-
T Consensus        74 tp~~~H~~~~~~al~~--GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~~--~~r~~p~~~~~k~~i~~g~iG  145 (334)
T 3ohs_X           74 TQHPQHKAAVMLCLAA--GKAVLCEKPMGVNAAEVREMVTEARSRGLFLMEAI--WTRFFPASEALRSVLAQGTLG  145 (334)
T ss_dssp             CCGGGHHHHHHHHHHT--TCEEEEESSSSSSHHHHHHHHHHHHHTTCCEEEEC--GGGGSHHHHHHHHHHHHTTTC
T ss_pred             CCcHHHHHHHHHHHhc--CCEEEEECCCCCCHHHHHHHHHHHHHhCCEEEEEE--hHhcCHHHHHHHHHHhcCCCC
Confidence            9988778888888887  45566653211110000 0111111  33333222  222245678888899888664

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=94.91  E-value=0.041  Score=50.70  Aligned_cols=74  Identities=15%  Similarity=0.238  Sum_probs=48.8

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHH-hCcceEE-cCCCCCCccHHHHHHHhhCCCcCEEE
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKK-FGITDFI-NPATCGDKTVSQVIKEMTDGGADYCF  259 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~-lga~~v~-~~~~~~~~~~~~~i~~~~~gg~d~vi  259 (371)
                      +++|||+|+ |.+|...+..+... |. +|++++++.++.+.+.. .+...+. |..+  +.+   .+.+... ++|+||
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~--d~~---~~~~~~~-~~d~Vi   96 (372)
T 3slg_A           24 AKKVLILGVNGFIGHHLSKRILETTDW-EVFGMDMQTDRLGDLVKHERMHFFEGDITI--NKE---WVEYHVK-KCDVIL   96 (372)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHSSC-EEEEEESCCTTTGGGGGSTTEEEEECCTTT--CHH---HHHHHHH-HCSEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCC-EEEEEeCChhhhhhhccCCCeEEEeCccCC--CHH---HHHHHhc-cCCEEE
Confidence            578999998 99999998888777 88 99999988776554433 2333222 2220  122   2332222 699999


Q ss_pred             ECCCC
Q 017457          260 ECIGL  264 (371)
Q Consensus       260 d~~g~  264 (371)
                      ++.+.
T Consensus        97 h~A~~  101 (372)
T 3slg_A           97 PLVAI  101 (372)
T ss_dssp             ECBCC
T ss_pred             EcCcc
Confidence            98773

>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*

Probab=94.91  E-value=0.02  Score=50.35  Aligned_cols=94  Identities=20%  Similarity=0.293  Sum_probs=63.3

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHc---CCCeEEEEcCChhHHHHHHH----hCcc---eEEcCCCCCCccHHHHHHHh
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLN---RASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIKEM  250 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~---g~~~Vi~~~~~~~~~~~~~~----lga~---~v~~~~~~~~~~~~~~i~~~  250 (371)
                      +++|.+||=+|+|. |..+..+++..   |+ +|++++.+++-++.+++    .+..   .++..+-          .++
T Consensus        68 ~~~~~~vLDlGcGt-G~~~~~la~~~~~~~~-~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~----------~~~  135 (261)
T 4gek_A           68 VQPGTQVYDLGCSL-GAATLSVRRNIHHDNC-KIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDI----------RDI  135 (261)
T ss_dssp             CCTTCEEEEETCTT-THHHHHHHHTCCSSSC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCT----------TTC
T ss_pred             CCCCCEEEEEeCCC-CHHHHHHHHhcCCCCC-EEEEEECCHHHHHHHHHHHHhhccCceEEEeeccc----------ccc
Confidence            78999999999875 77777788764   67 89999999988777755    2321   2222111          112


Q ss_pred             hCCCcCEEEECCC-----C---hHHHHHHHHHhhcCCceEEEECc
Q 017457          251 TDGGADYCFECIG-----L---TSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       251 ~~gg~d~vid~~g-----~---~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      ..+.+|+|+....     .   ...++.+.+.|+|+ |.++....
T Consensus       136 ~~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpG-G~lii~e~  179 (261)
T 4gek_A          136 AIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPG-GALVLSEK  179 (261)
T ss_dssp             CCCSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             cccccccceeeeeeeecCchhHhHHHHHHHHHcCCC-cEEEEEec
Confidence            2236888875322     1   12478899999998 99887643

>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}

Probab=94.91  E-value=0.048  Score=46.47  Aligned_cols=95  Identities=16%  Similarity=0.103  Sum_probs=66.2

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCc-ceEEcCCCCCCccHHHHHHHhh-CCCcCEE
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI-TDFINPATCGDKTVSQVIKEMT-DGGADYC  258 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga-~~v~~~~~~~~~~~~~~i~~~~-~gg~d~v  258 (371)
                      +.++.+||-+|+|. |..+..+++. |. +|++++.++...+.+++... ..++..+-.  ..+     ... .+.||+|
T Consensus        46 ~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~--~~~-----~~~~~~~fD~v  115 (226)
T 3m33_A           46 LTPQTRVLEAGCGH-GPDAARFGPQ-AA-RWAAYDFSPELLKLARANAPHADVYEWNGK--GEL-----PAGLGAPFGLI  115 (226)
T ss_dssp             CCTTCEEEEESCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHCTTSEEEECCSC--SSC-----CTTCCCCEEEE
T ss_pred             CCCCCeEEEeCCCC-CHHHHHHHHc-CC-EEEEEECCHHHHHHHHHhCCCceEEEcchh--hcc-----CCcCCCCEEEE
Confidence            46889999999865 6677777776 77 99999999998888877532 223222110  010     112 2379999


Q ss_pred             EECCCChHHHHHHHHHhhcCCceEEEEC
Q 017457          259 FECIGLTSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       259 id~~g~~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      +....-...+..+.+.|+++ |+++..+
T Consensus       116 ~~~~~~~~~l~~~~~~Lkpg-G~l~~~~  142 (226)
T 3m33_A          116 VSRRGPTSVILRLPELAAPD-AHFLYVG  142 (226)
T ss_dssp             EEESCCSGGGGGHHHHEEEE-EEEEEEE
T ss_pred             EeCCCHHHHHHHHHHHcCCC-cEEEEeC
Confidence            97655555588999999998 9998544

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=94.89  E-value=0.061  Score=48.74  Aligned_cols=96  Identities=11%  Similarity=0.119  Sum_probs=58.1

Q ss_pred             CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCC
Q 017457          185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG  263 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g  263 (371)
                      .+|||+|+ |.+|...+..+...|. +|+++++++.+.+.+...++..+. .+-   .+ .+.+.+... ++|+||++.+
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~-~Dl---~d-~~~~~~~~~-~~d~vih~a~   86 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGH-DLVLIHRPSSQIQRLAYLEPECRV-AEM---LD-HAGLERALR-GLDGVIFSAG   86 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECTTSCGGGGGGGCCEEEE-CCT---TC-HHHHHHHTT-TCSEEEEC--
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecChHhhhhhccCCeEEEE-ecC---CC-HHHHHHHHc-CCCEEEECCc
Confidence            37999998 9999999998888998 999999887654433333443322 111   12 233444433 6999999887


Q ss_pred             ChH---------------HHHHHHHHhhcC-CceEEEECc
Q 017457          264 LTS---------------VMNDAFNSSREG-WGKTVILGV  287 (371)
Q Consensus       264 ~~~---------------~~~~~~~~l~~~-~G~~v~~g~  287 (371)
                      ...               ....+++.+.+. -++++.++.
T Consensus        87 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS  126 (342)
T 2x4g_A           87 YYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGS  126 (342)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHTCSCEEEECC
T ss_pred             cCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence            321               122344444432 158888875

>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}

Probab=94.89  E-value=0.31  Score=44.83  Aligned_cols=133  Identities=16%  Similarity=0.088  Sum_probs=76.9

Q ss_pred             CeEEEEcCChHHHH-HHHHHHHc-CCCeEE-EEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          185 STVAIFGLGAVGLA-VAEGARLN-RASKII-GVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       185 ~~VLI~G~g~~G~~-ai~la~~~-g~~~Vi-~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      -+|.|+|+|.+|.. .+...+.. ++ +++ +.++++++.+  ++++...++       .++.+.+.   ...+|+|+.|
T Consensus         8 ~rvgiiG~G~~g~~~~~~~l~~~~~~-~l~av~d~~~~~~~--~~~~~~~~~-------~~~~~ll~---~~~~D~V~i~   74 (364)
T 3e82_A            8 INIALIGYGFVGKTFHAPLIRSVPGL-NLAFVASRDEEKVK--RDLPDVTVI-------ASPEAAVQ---HPDVDLVVIA   74 (364)
T ss_dssp             EEEEEECCSHHHHHTHHHHHHTSTTE-EEEEEECSCHHHHH--HHCTTSEEE-------SCHHHHHT---CTTCSEEEEC
T ss_pred             ceEEEECCCHHHHHHHHHHHhhCCCe-EEEEEEcCCHHHHH--hhCCCCcEE-------CCHHHHhc---CCCCCEEEEe
Confidence            36899999999985 66665554 77 555 5566665543  344433343       23333322   1279999999


Q ss_pred             CCChHHHHHHHHHhhcCCceEEEECccCCCCceec-CHHHHhc--CceEEEeeccCCCchhhHHHHHHHHHcCCCC
Q 017457          262 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISL-NSIEILK--GRSVCGTYFGGLKPRSDIATLAQKYLDKELN  334 (371)
Q Consensus       262 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~-~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~  334 (371)
                      ++.....+.+..++..  |.-|++..+........ .......  +..+.-.  .+.+....++.+.+++++|.+-
T Consensus        75 tp~~~H~~~~~~al~a--Gk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v~--~~~r~~p~~~~~~~~i~~g~iG  146 (364)
T 3e82_A           75 SPNATHAPLARLALNA--GKHVVVDKPFTLDMQEARELIALAEEKQRLLSVF--HNRRWDSDYLGIRQVIEQGTLG  146 (364)
T ss_dssp             SCGGGHHHHHHHHHHT--TCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEEC--CCCTTCHHHHHHHHHHHHTTTC
T ss_pred             CChHHHHHHHHHHHHC--CCcEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEE--eecccCHHHHHHHHHHHcCCCc
Confidence            9988778888888887  55566654211110000 0111112  3333322  2333346688888999988653

>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17

Probab=94.89  E-value=0.11  Score=45.93  Aligned_cols=96  Identities=20%  Similarity=0.131  Sum_probs=64.0

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh------Cc--c--eEEcCCCCCCccHHHHHHHhh
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF------GI--T--DFINPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l------ga--~--~v~~~~~~~~~~~~~~i~~~~  251 (371)
                      .++++||++|+|. |..+..+++..+..+|++++.+++-.+.+++.      +.  .  .++..      +..+.+.. .
T Consensus        74 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~------D~~~~l~~-~  145 (275)
T 1iy9_A           74 PNPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVD------DGFMHIAK-S  145 (275)
T ss_dssp             SSCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEES------CSHHHHHT-C
T ss_pred             CCCCEEEEECCch-HHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEEC------cHHHHHhh-C
Confidence            3578999999865 66666777776655999999999888777652      11  1  23322      22233332 2


Q ss_pred             CCCcCEEEECCCC----------hHHHHHHHHHhhcCCceEEEEC
Q 017457          252 DGGADYCFECIGL----------TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       252 ~gg~d~vid~~g~----------~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      .+.+|+|+.-...          ...++.+.+.|+++ |.++.-.
T Consensus       146 ~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pg-G~lv~~~  189 (275)
T 1iy9_A          146 ENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKED-GIFVAQT  189 (275)
T ss_dssp             CSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEE-EEEEEEC
T ss_pred             CCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEEc
Confidence            3489999843322          34588999999998 9988764

>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}

Probab=94.87  E-value=0.11  Score=47.38  Aligned_cols=45  Identities=24%  Similarity=0.307  Sum_probs=37.5

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhC
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG  228 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lg  228 (371)
                      -.|++|.|+|.|.+|...++.++..|. +|++.+++.++ +...+.|
T Consensus       144 l~g~~vgIIG~G~iG~~vA~~l~~~G~-~V~~~d~~~~~-~~~~~~g  188 (333)
T 2d0i_A          144 LYGKKVGILGMGAIGKAIARRLIPFGV-KLYYWSRHRKV-NVEKELK  188 (333)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCH-HHHHHHT
T ss_pred             CCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEECCCcch-hhhhhcC
Confidence            357899999999999999999999999 99999988765 4444444

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=94.87  E-value=0.19  Score=44.56  Aligned_cols=74  Identities=19%  Similarity=0.250  Sum_probs=52.6

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCCh
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT  265 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~~  265 (371)
                      +|.|+|+|.+|...+..+...|. +|++.++++++.+.+.+.|.. +.       .+..+.+.     ..|+||-+++.+
T Consensus         2 ~i~iiG~G~mG~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~-~~-------~~~~~~~~-----~~Dvvi~~vp~~   67 (296)
T 2gf2_A            2 PVGFIGLGNMGNPMAKNLMKHGY-PLIIYDVFPDACKEFQDAGEQ-VV-------SSPADVAE-----KADRIITMLPTS   67 (296)
T ss_dssp             CEEEECCSTTHHHHHHHHHHTTC-CEEEECSSTHHHHHHHTTTCE-EC-------SSHHHHHH-----HCSEEEECCSSH
T ss_pred             eEEEEeccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCe-ec-------CCHHHHHh-----cCCEEEEeCCCH
Confidence            58899999999998888878898 899999999988888776643 11       12322222     368888888665


Q ss_pred             HHHHHHHH
Q 017457          266 SVMNDAFN  273 (371)
Q Consensus       266 ~~~~~~~~  273 (371)
                      ......+.
T Consensus        68 ~~~~~v~~   75 (296)
T 2gf2_A           68 INAIEAYS   75 (296)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            44555554

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=94.84  E-value=0.064  Score=46.00  Aligned_cols=99  Identities=15%  Similarity=0.173  Sum_probs=59.0

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCC-eEEEEcCChhHHHHHHHhCcceE-EcCCCCCCccHHHHHHHhhCCCcCEEE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRAS-KIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMTDGGADYCF  259 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~-~Vi~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~gg~d~vi  259 (371)
                      .+++|||+|+ |.+|...+..+...|+. +|+++++++++.+....-++..+ .|..+   .   +.+.+... ++|++|
T Consensus        17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d---~---~~~~~~~~-~~d~vi   89 (242)
T 2bka_A           17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEK---L---DDYASAFQ-GHDVGF   89 (242)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGG---G---GGGGGGGS-SCSEEE
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCC---H---HHHHHHhc-CCCEEE
Confidence            3678999997 99999999888888863 68888877654332211122222 12111   1   12223222 799999


Q ss_pred             ECCCChH--------------HHHHHHHHhhcC-CceEEEECcc
Q 017457          260 ECIGLTS--------------VMNDAFNSSREG-WGKTVILGVE  288 (371)
Q Consensus       260 d~~g~~~--------------~~~~~~~~l~~~-~G~~v~~g~~  288 (371)
                      ++.|...              ....+++.+... .++++.++..
T Consensus        90 ~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~  133 (242)
T 2bka_A           90 CCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSK  133 (242)
T ss_dssp             ECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             ECCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccC
Confidence            9988532              123344444442 2588888763

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=94.83  E-value=0.063  Score=44.78  Aligned_cols=74  Identities=16%  Similarity=0.217  Sum_probs=45.6

Q ss_pred             CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457          185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  262 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~  262 (371)
                      +++||+|+ |++|...+..+...   +|+++++++++.+.+.+ ++. .++..+-.+...+.+.+.+  .+++|+++++.
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~---~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~--~~~id~vi~~a   74 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH---DLLLSGRRAGALAELAREVGA-RALPADLADELEAKALLEE--AGPLDLLVHAV   74 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS---EEEEECSCHHHHHHHHHHHTC-EECCCCTTSHHHHHHHHHH--HCSEEEEEECC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC---CEEEEECCHHHHHHHHHhccC-cEEEeeCCCHHHHHHHHHh--cCCCCEEEECC
Confidence            47899998 99999877665544   89999999887766543 333 3332221011122222222  24799999988


Q ss_pred             CC
Q 017457          263 GL  264 (371)
Q Consensus       263 g~  264 (371)
                      |.
T Consensus        75 g~   76 (207)
T 2yut_A           75 GK   76 (207)
T ss_dssp             CC
T ss_pred             Cc
Confidence            73

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=94.82  E-value=0.035  Score=50.32  Aligned_cols=78  Identities=12%  Similarity=0.058  Sum_probs=47.4

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHH-HHHHhCcceEEcCCCCCCccHHHHHHHhhCC-CcCEE
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFE-IGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYC  258 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~-~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g-g~d~v  258 (371)
                      -.+.+|||+|+ |.+|...+..+...|+ +|++++++..... .+..+..-.++..+-   .+ .+.+.++... ++|+|
T Consensus        18 ~~~~~vlVTGasG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl---~d-~~~~~~~~~~~~~D~v   92 (330)
T 2pzm_A           18 GSHMRILITGGAGCLGSNLIEHWLPQGH-EILVIDNFATGKREVLPPVAGLSVIEGSV---TD-AGLLERAFDSFKPTHV   92 (330)
T ss_dssp             TTCCEEEEETTTSHHHHHHHHHHGGGTC-EEEEEECCSSSCGGGSCSCTTEEEEECCT---TC-HHHHHHHHHHHCCSEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCccchhhhhccCCceEEEeeC---CC-HHHHHHHHhhcCCCEE
Confidence            35679999998 9999999998888898 9999988543321 111121112222211   11 1223332222 79999


Q ss_pred             EECCCC
Q 017457          259 FECIGL  264 (371)
Q Consensus       259 id~~g~  264 (371)
                      |++.+.
T Consensus        93 ih~A~~   98 (330)
T 2pzm_A           93 VHSAAA   98 (330)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            998873

>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38

Probab=94.82  E-value=0.22  Score=44.91  Aligned_cols=99  Identities=17%  Similarity=0.267  Sum_probs=65.5

Q ss_pred             HcCCCCCCeEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHH----hCcc--eEEcCCCCCCccHHHHHHHh
Q 017457          178 VAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIKEM  250 (371)
Q Consensus       178 ~~~~~~g~~VLI~G~g~~G~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~----lga~--~v~~~~~~~~~~~~~~i~~~  250 (371)
                      ...+++|++||=+|+|+ |..++++++.++ ..+|++++.++.+.+.+++    +|..  .++..+-   .++.    . 
T Consensus       113 ~l~~~~g~~VLDlg~G~-G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~---~~~~----~-  183 (315)
T 1ixk_A          113 ALDPKPGEIVADMAAAP-GGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSS---LHIG----E-  183 (315)
T ss_dssp             HHCCCTTCEEEECCSSC-SHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCG---GGGG----G-
T ss_pred             HhCCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECCh---hhcc----c-
Confidence            45678999999988765 666677887763 2389999999998877654    4653  2333222   2221    1 


Q ss_pred             hCCCcCEEE-E--CCCC-------------------------hHHHHHHHHHhhcCCceEEEEC
Q 017457          251 TDGGADYCF-E--CIGL-------------------------TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       251 ~~gg~d~vi-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      ..+.||+|+ |  |+|.                         ...+..+.+.|+++ |+++...
T Consensus       184 ~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpG-G~lv~st  246 (315)
T 1ixk_A          184 LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPG-GILVYST  246 (315)
T ss_dssp             GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             ccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCC-CEEEEEe
Confidence            133799998 4  3331                         14467889999998 9988754

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=94.82  E-value=0.053  Score=46.47  Aligned_cols=72  Identities=11%  Similarity=0.184  Sum_probs=45.1

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhh-CCCcCEEEEC
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMT-DGGADYCFEC  261 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~-~gg~d~vid~  261 (371)
                      ++++||+|+ |++|.+.++.+...|+ +|++++++++ .   .++   .++..+-.+.+++.+.+.+.. .+++|+++++
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~-~---~~~---~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~   73 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGY-RVVVLDLRRE-G---EDL---IYVEGDVTREEDVRRAVARAQEEAPLFAVVSA   73 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCC-S---SSS---EEEECCTTCHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEccCcc-c---cce---EEEeCCCCCHHHHHHHHHHHHhhCCceEEEEc
Confidence            578999998 9999999888888899 8999987764 1   111   222211101122333333221 1278999988


Q ss_pred             CC
Q 017457          262 IG  263 (371)
Q Consensus       262 ~g  263 (371)
                      .|
T Consensus        74 ag   75 (242)
T 1uay_A           74 AG   75 (242)
T ss_dssp             CC
T ss_pred             cc
Confidence            76

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=94.81  E-value=0.11  Score=45.37  Aligned_cols=102  Identities=17%  Similarity=0.232  Sum_probs=68.3

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh----Cc---ceEEcCCCCCCccHHHHH
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GI---TDFINPATCGDKTVSQVI  247 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l----ga---~~v~~~~~~~~~~~~~~i  247 (371)
                      +.....+.++.+||-+|+|. |..+..+++..+. +|++++.+++..+.+++.    |.   -.++..+-   .++    
T Consensus        53 l~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~~----  123 (273)
T 3bus_A           53 MIALLDVRSGDRVLDVGCGI-GKPAVRLATARDV-RVTGISISRPQVNQANARATAAGLANRVTFSYADA---MDL----  123 (273)
T ss_dssp             HHHHSCCCTTCEEEEESCTT-SHHHHHHHHHSCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT---TSC----
T ss_pred             HHHhcCCCCCCEEEEeCCCC-CHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECcc---ccC----
Confidence            34556778999999999876 7788888888888 999999999877776542    32   12222211   111    


Q ss_pred             HHhhCCCcCEEEECC-----CC-hHHHHHHHHHhhcCCceEEEECc
Q 017457          248 KEMTDGGADYCFECI-----GL-TSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       248 ~~~~~gg~d~vid~~-----g~-~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                       ....+.+|+|+...     .. ...++.+.+.|+++ |+++....
T Consensus       124 -~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~i~~~  167 (273)
T 3bus_A          124 -PFEDASFDAVWALESLHHMPDRGRALREMARVLRPG-GTVAIADF  167 (273)
T ss_dssp             -CSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEE-EEEEEEEE
T ss_pred             -CCCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCC-eEEEEEEe
Confidence             01123799998432     12 23478888999998 98877653

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=94.79  E-value=0.066  Score=49.12  Aligned_cols=99  Identities=17%  Similarity=0.148  Sum_probs=58.8

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHH--cCCCeEEEEcCChhHH-------------HHHHHhCcceEEcCCCCCCccHHHH
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARL--NRASKIIGVDINPEKF-------------EIGKKFGITDFINPATCGDKTVSQV  246 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~--~g~~~Vi~~~~~~~~~-------------~~~~~lga~~v~~~~~~~~~~~~~~  246 (371)
                      .+++|||+|+ |.+|...+..+..  .|+ +|++++++....             ......+.. ++..+-   .+ .+.
T Consensus         9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl---~d-~~~   82 (362)
T 3sxp_A            9 ENQTILITGGAGFVGSNLAFHFQENHPKA-KVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGE-VIAADI---NN-PLD   82 (362)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCTTS-EEEEEECCCCC-------CCCCCCGGGGTTCCSE-EEECCT---TC-HHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCC-eEEEEECCCccccccccchhhhhhhhhccccCce-EEECCC---CC-HHH
Confidence            4689999998 9999999888887  899 999998755411             111111222 222111   12 233


Q ss_pred             HHHhhCCCcCEEEECCCChH---------------HHHHHHHHhhcCCceEEEECc
Q 017457          247 IKEMTDGGADYCFECIGLTS---------------VMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       247 i~~~~~gg~d~vid~~g~~~---------------~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      +.++...++|+||++.+...               ....+++.+....+++|.++.
T Consensus        83 ~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V~~SS  138 (362)
T 3sxp_A           83 LRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAKVIYASS  138 (362)
T ss_dssp             HHHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             HHHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCc
Confidence            44442338999999987321               123444444443267777764

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=94.78  E-value=0.2  Score=44.97  Aligned_cols=92  Identities=10%  Similarity=0.107  Sum_probs=58.1

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh------hHHHHHH---HhCcceEE-cCCCCCCccHHHHHHHhhC
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP------EKFEIGK---KFGITDFI-NPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~------~~~~~~~---~lga~~v~-~~~~~~~~~~~~~i~~~~~  252 (371)
                      ..+|||+|+ |.+|...+..+...|. +|+++++++      ++.+.+.   ..++..+. |..+      .+.+.+...
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d------~~~l~~a~~   76 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSH-PTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEE------HEKMVSVLK   76 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTC-CEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTC------HHHHHHHHT
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCC-cEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCC------HHHHHHHHc
Confidence            357999998 9999999998888898 898888875      3433332   33544332 3222      233444443


Q ss_pred             CCcCEEEECCCCh--HHHHHHHHHhhcC--CceEE
Q 017457          253 GGADYCFECIGLT--SVMNDAFNSSREG--WGKTV  283 (371)
Q Consensus       253 gg~d~vid~~g~~--~~~~~~~~~l~~~--~G~~v  283 (371)
                       ++|+||++.+..  .....+++.+...  -++++
T Consensus        77 -~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (321)
T 3c1o_A           77 -QVDIVISALPFPMISSQIHIINAIKAAGNIKRFL  110 (321)
T ss_dssp             -TCSEEEECCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred             -CCCEEEECCCccchhhHHHHHHHHHHhCCccEEe
Confidence             699999998753  2234555555543  13666

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=94.78  E-value=0.037  Score=53.84  Aligned_cols=71  Identities=18%  Similarity=0.185  Sum_probs=46.7

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      .++++||+|+|++|.+++..+...|+ +|+++.++.++.+.+. +++.. +.+..+         +.++..+.+|+++++
T Consensus       363 ~~k~vlV~GaGGig~aia~~L~~~G~-~V~i~~R~~~~a~~la~~~~~~-~~~~~d---------l~~~~~~~~DilVN~  431 (523)
T 2o7s_A          363 ASKTVVVIGAGGAGKALAYGAKEKGA-KVVIANRTYERALELAEAIGGK-ALSLTD---------LDNYHPEDGMVLANT  431 (523)
T ss_dssp             ---CEEEECCSHHHHHHHHHHHHHCC--CEEEESSHHHHHHHHHHTTC--CEETTT---------TTTC--CCSEEEEEC
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCc-eeeHHH---------hhhccccCceEEEEC
Confidence            46789999999999999999989999 8999999988766553 45432 222211         111111258999999


Q ss_pred             CCC
Q 017457          262 IGL  264 (371)
Q Consensus       262 ~g~  264 (371)
                      +|.
T Consensus       432 agv  434 (523)
T 2o7s_A          432 TSM  434 (523)
T ss_dssp             SST
T ss_pred             CCC
Confidence            884

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=94.77  E-value=0.05  Score=47.17  Aligned_cols=97  Identities=20%  Similarity=0.238  Sum_probs=66.9

Q ss_pred             cCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc---eEEcCCCCCCccHHHHHHHhh
Q 017457          179 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       179 ~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~---~v~~~~~~~~~~~~~~i~~~~  251 (371)
                      ..+.++.+||-+|+|. |..+..+++..+. +|++++.+++..+.+++    .|..   .++..+-   .++     ...
T Consensus        42 ~~~~~~~~vLDiG~G~-G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~~-----~~~  111 (257)
T 3f4k_A           42 NELTDDAKIADIGCGT-GGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGSM---DNL-----PFQ  111 (257)
T ss_dssp             CCCCTTCEEEEETCTT-SHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT---TSC-----SSC
T ss_pred             hcCCCCCeEEEeCCCC-CHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh---hhC-----CCC
Confidence            3678899999999976 8888899998887 99999999988777654    3321   2222111   111     011


Q ss_pred             CCCcCEEEEC-----CCChHHHHHHHHHhhcCCceEEEEC
Q 017457          252 DGGADYCFEC-----IGLTSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       252 ~gg~d~vid~-----~g~~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      .+.+|+|+..     .+-...+..+.+.|+|+ |.++...
T Consensus       112 ~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pg-G~l~~~~  150 (257)
T 3f4k_A          112 NEELDLIWSEGAIYNIGFERGMNEWSKYLKKG-GFIAVSE  150 (257)
T ss_dssp             TTCEEEEEEESCSCCCCHHHHHHHHHTTEEEE-EEEEEEE
T ss_pred             CCCEEEEEecChHhhcCHHHHHHHHHHHcCCC-cEEEEEE
Confidence            2379999742     22234578888999998 9988765

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=94.76  E-value=0.078  Score=46.24  Aligned_cols=94  Identities=11%  Similarity=-0.003  Sum_probs=61.7

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCc---------------------c-eEEcCCC
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGI---------------------T-DFINPAT  237 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga---------------------~-~v~~~~~  237 (371)
                      ..++.+||..|+|. |..+..||+. |+ +|++++.++...+.+++ .+.                     . .++..+-
T Consensus        66 ~~~~~~vLD~GCG~-G~~~~~La~~-G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~  142 (252)
T 2gb4_A           66 GQSGLRVFFPLCGK-AIEMKWFADR-GH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSI  142 (252)
T ss_dssp             TCCSCEEEETTCTT-CTHHHHHHHT-TC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCT
T ss_pred             CCCCCeEEEeCCCC-cHHHHHHHHC-CC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcc
Confidence            46788999999875 7777777765 88 99999999998888754 321                     1 1221111


Q ss_pred             CCCccHHHHHHHhhC-CCcCEEEECCC-----C---hHHHHHHHHHhhcCCceEEEEC
Q 017457          238 CGDKTVSQVIKEMTD-GGADYCFECIG-----L---TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       238 ~~~~~~~~~i~~~~~-gg~d~vid~~g-----~---~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                         .++     .... +.||+|++...     .   ...++.+.+.|+|+ |+++...
T Consensus       143 ---~~l-----~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpG-G~l~l~~  191 (252)
T 2gb4_A          143 ---FDL-----PRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKE-FQYLVAV  191 (252)
T ss_dssp             ---TTG-----GGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             ---ccC-----CcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCC-eEEEEEE
Confidence               111     1112 47999997432     1   12467888999998 9986543

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=94.76  E-value=0.083  Score=48.84  Aligned_cols=84  Identities=24%  Similarity=0.203  Sum_probs=51.4

Q ss_pred             CCCCCeEEEEcC-ChHHHH-HHHHHHHcCCCeEEEEcCChh----------------HHHHHHHhCcc-eEEcCCCCCCc
Q 017457          181 VEVGSTVAIFGL-GAVGLA-VAEGARLNRASKIIGVDINPE----------------KFEIGKKFGIT-DFINPATCGDK  241 (371)
Q Consensus       181 ~~~g~~VLI~G~-g~~G~~-ai~la~~~g~~~Vi~~~~~~~----------------~~~~~~~lga~-~v~~~~~~~~~  241 (371)
                      ...++++||+|+ +++|++ ++.+|...|+ .++++....+                -.+.+++.|.. ..++-+-.+++
T Consensus        47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA-~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e  125 (401)
T 4ggo_A           47 AKAPKNVLVLGCSNGYGLASRITAAFGYGA-ATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDE  125 (401)
T ss_dssp             SCCCCEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHH
T ss_pred             cCCCCEEEEECCCCcHHHHHHHHHHhhCCC-CEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHH
Confidence            456799999998 899998 4566667788 7777754332                12345566654 33443332223


Q ss_pred             cHHHHHHHhh--CCCcCEEEECCCCh
Q 017457          242 TVSQVIKEMT--DGGADYCFECIGLT  265 (371)
Q Consensus       242 ~~~~~i~~~~--~gg~d~vid~~g~~  265 (371)
                      ...+.+.+..  .|++|+++++.+.+
T Consensus       126 ~i~~vi~~i~~~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          126 IKAQVIEEAKKKGIKFDLIVYSLASP  151 (401)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred             HHHHHHHHHHHhcCCCCEEEEecccc
Confidence            3333333332  23899999988854

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=94.75  E-value=0.15  Score=45.29  Aligned_cols=96  Identities=21%  Similarity=0.115  Sum_probs=60.3

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcC-CCeEEEEcCChhHH--HHHHHhCcceEE-cCCCCCCccHHHHHHHhhCCCcCEE
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNR-ASKIIGVDINPEKF--EIGKKFGITDFI-NPATCGDKTVSQVIKEMTDGGADYC  258 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g-~~~Vi~~~~~~~~~--~~~~~lga~~v~-~~~~~~~~~~~~~i~~~~~gg~d~v  258 (371)
                      .++|||+|+ |.+|...+..+...| . +|+++++++++.  +.+...++..+. |..     + .+.+.+... ++|+|
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~-~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~-----d-~~~l~~~~~-~~d~v   76 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTF-KVRVVTRNPRKKAAKELRLQGAEVVQGDQD-----D-QVIMELALN-GAYAT   76 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSS-EEEEEESCTTSHHHHHHHHTTCEEEECCTT-----C-HHHHHHHHT-TCSEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCc-eEEEEEcCCCCHHHHHHHHCCCEEEEecCC-----C-HHHHHHHHh-cCCEE
Confidence            478999998 999999998887778 8 899999887653  233344554332 222     2 233444333 69999


Q ss_pred             EECCCChH---------HHHHHHHHhhcC-CceEEEECc
Q 017457          259 FECIGLTS---------VMNDAFNSSREG-WGKTVILGV  287 (371)
Q Consensus       259 id~~g~~~---------~~~~~~~~l~~~-~G~~v~~g~  287 (371)
                      |++.+...         ....+++.+... -++++..+.
T Consensus        77 i~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~  115 (299)
T 2wm3_A           77 FIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGL  115 (299)
T ss_dssp             EECCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred             EEeCCCCccccchHHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence            99887321         133445555442 147777543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	371
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	6e-39
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	1e-38
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	2e-34
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	2e-34
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	2e-33
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	3e-31
d1cdoa1	199	b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase	1e-30
d1p0fa1	198	b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro	1e-30
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	1e-29
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	1e-28
d1e3ia1	202	b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase	1e-27
d2jhfa1	198	b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase	2e-25
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	1e-21
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	6e-19
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	2e-18
d1llua1	175	b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase	2e-17
d1uufa1	179	b.35.1.2 (A:3-144,A:313-349) Hypothetical protein	3e-17
d1vj0a1	184	b.35.1.2 (A:2-155,A:338-367) Hypothetical protein	3e-16
d1pl8a1	185	b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor	3e-16
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	1e-14
d1jvba1	177	b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase	2e-14
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	1e-13
d1rjwa1	171	b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase	1e-13
d1kola2	195	c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps	1e-12
d1pl8a2	171	c.2.1.1 (A:146-316) Ketose reductase (sorbitol deh	4e-11
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	1e-10
d1h2ba1	171	b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas	1e-10
d1e3ja2	170	c.2.1.1 (A:143-312) Ketose reductase (sorbitol deh	3e-10
d1jqba1	177	b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon	2e-09
d1piwa2	168	c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase	3e-09
d1iz0a1	131	b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase	2e-04
d1pqwa_	183	c.2.1.1 (A:) Putative enoyl reductase domain of po	0.001
d1dlja2	196	c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGD	0.004

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score =  134 bits (339), Expect = 6e-39
 Identities = 71/175 (40%), Positives = 98/175 (56%), Gaps = 1/175 (0%)

Query: 157 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI 216
           P    CL+ CG STG GAA K   V+ GST  +FGLG VGL+V  G +   AS+IIG+D+
Sbjct: 3   PPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDL 62

Query: 217 NPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSR 276
           N +KFE     G T+ I+P     K +S+V+ EMT     Y FE IG    M DA  S  
Sbjct: 63  NKDKFEKAMAVGATECISPKD-STKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCH 121

Query: 277 EGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDK 331
             +G +V++GV      ++ + + +  GR+  G  FGGLK R D+  L  ++L K
Sbjct: 122 MNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAK 176

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score =  134 bits (337), Expect = 1e-38
 Identities = 69/172 (40%), Positives = 99/172 (57%), Gaps = 2/172 (1%)

Query: 161 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK 220
           +CL+ CG +TG GAA   A V  GST A+FGLG VG +   G +   AS+IIGV  + +K
Sbjct: 5   SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDK 64

Query: 221 FEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWG 280
           F    + G T+ +NP    DK + +VI E T+GG DY  EC G    M +A  S+  G G
Sbjct: 65  FPKAIELGATECLNPKD-YDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSG 123

Query: 281 KTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKE 332
            TV+LG+      + L+ + +L GRS+ G+ FGG K   +++ L   Y+ K+
Sbjct: 124 VTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFKGE-EVSRLVDDYMKKK 174

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score =  123 bits (308), Expect = 2e-34
 Identities = 83/176 (47%), Positives = 109/176 (61%), Gaps = 1/176 (0%)

Query: 157 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI 216
           PL   CLL CG+STG GAA   A +E GS  A+FGLG VGLAV  G ++  AS+IIGVDI
Sbjct: 2   PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDI 61

Query: 217 NPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSR 276
           N +KF   K+FG T+ INP     K + +V+ EMTDGG DY FECIG   VM  A  +  
Sbjct: 62  NKDKFARAKEFGATECINPQD-FSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACH 120

Query: 277 EGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKE 332
           +GWG +V++GV   G  I+    +++ GR+  GT FGG K    +  L  +Y+ K+
Sbjct: 121 KGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKK 176

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score =  123 bits (308), Expect = 2e-34
 Identities = 74/176 (42%), Positives = 106/176 (60%), Gaps = 1/176 (0%)

Query: 157 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI 216
           PL   CL+ CG STG G+A KVA V  GST A+FGLG VGL+V  G +   A++IIGVDI
Sbjct: 2   PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDI 61

Query: 217 NPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSR 276
           N +KF   K+ G T+ +NP     K + +V+ EM++GG D+ FE IG    M  A +  +
Sbjct: 62  NKDKFAKAKEVGATECVNPQD-YKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQ 120

Query: 277 EGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKE 332
           E +G +VI+GV      +S+N + +L GR+  G  FGG K +  +  L   ++ K+
Sbjct: 121 EAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKK 176

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score =  120 bits (300), Expect = 2e-33
 Identities = 70/176 (39%), Positives = 99/176 (56%), Gaps = 3/176 (1%)

Query: 157 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI 216
            L   CL+ CG S+G GAA   A V  GST A+FGLG VGL+   G ++  AS+II +DI
Sbjct: 2   NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDI 61

Query: 217 NPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSR 276
           N EKF   K  G TD +NP    DK V  VI E+T GG DY  +C G    +  A + + 
Sbjct: 62  NGEKFPKAKALGATDCLNPREL-DKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTV 120

Query: 277 EGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKE 332
            GWG   ++G       +++ +++++ GRS+ GT+FGG K    +  L   Y +K+
Sbjct: 121 LGWGSCTVVG--AKVDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKK 174

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score =  114 bits (286), Expect = 3e-31
 Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 5/178 (2%)

Query: 156 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVD 215
           +P+ +   L CG+ TG GA      V   S+   +G GAVGL+    A++  AS II VD
Sbjct: 1   VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVD 60

Query: 216 INPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSS 275
           I   + E+ K+ G T  IN      +     IKE+TDGG ++  E  G   ++    ++ 
Sbjct: 61  IVESRLELAKQLGATHVINSK---TQDPVAAIKEITDGGVNFALESTGSPEILKQGVDAL 117

Query: 276 REGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGGLKPRSDIATLAQKYLDKE 332
               GK  ++G    G+    +  ++L  G+++ G   G   P+  I  L + Y   +
Sbjct: 118 GI-LGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGK 174

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score =  113 bits (284), Expect = 1e-30
 Identities = 68/186 (36%), Positives = 95/186 (51%), Gaps = 3/186 (1%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
             KPLVIEEIEV+ P A EIRIKI+ T +CH+D+          K   PV+ GHE  G+V
Sbjct: 17  ANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGK--HKDGFPVVLGHEGAGIV 74

Query: 65  ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFREL 124
           ESVG  V E +  + V+P+F   CGECR C+S K+N C K      P++     +RF   
Sbjct: 75  ESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCK 134

Query: 125 KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVG 184
               +  FL  S+F++Y+VV+   V KI P + L         + +   A   +   +  
Sbjct: 135 GRK-VLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLESVNDAIDLMKHGKCI 193

Query: 185 STVAIF 190
            TV   
Sbjct: 194 RTVLSL 199

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score =  113 bits (284), Expect = 1e-30
 Identities = 73/195 (37%), Positives = 96/195 (49%), Gaps = 14/195 (7%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
           P KPL +E I V PPKA E+RIKIL + +C SD +  K         +     HEAVGVV
Sbjct: 17  PHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSKFPVILG---HEAVGVV 73

Query: 65  ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFREL 124
           ES+G  V  VK  D V+P+F   CG CR CKSS SN C K   G +  +  D TSRF   
Sbjct: 74  ESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFT-C 132

Query: 125 KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVG 184
           +G  I++ +  S+FTEY+VV    V KI P I +             V     +  +   
Sbjct: 133 RGKPIYNLMGTSTFTEYTVVADIAVAKIDPKINVNFL----------VSTKLTLDQINKA 182

Query: 185 STVAIFGLGAVGLAV 199
             +   G G   + +
Sbjct: 183 FELLSSGQGVRSIMI 197

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score =  110 bits (275), Expect = 1e-29
 Identities = 81/176 (46%), Positives = 110/176 (62%), Gaps = 2/176 (1%)

Query: 157 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI 216
           PL   CLL CGVSTG GAA   A VE GST A+FGLGAVGLA   G     A +II VD+
Sbjct: 2   PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDL 61

Query: 217 NPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSR 276
           NP+KFE  K FG TDF+NP     + +SQV+ +MT+GG D+  EC+G   VM +A  S  
Sbjct: 62  NPDKFEKAKVFGATDFVNPND-HSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCL 120

Query: 277 EGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKE 332
           +GWG +V++G       ++   I+++ GR+  G+ FGG K +  +  + + YLDK+
Sbjct: 121 KGWGVSVLVGW-TDLHDVATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKK 175

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score =  108 bits (270), Expect = 1e-28
 Identities = 74/185 (40%), Positives = 99/185 (53%), Gaps = 3/185 (1%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
            GKPL IEEIEV PPKA E+RIKI+ T++CH+D          P+   PVI GH   G+V
Sbjct: 15  AGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSG--ADPEGCFPVILGHLGAGIV 72

Query: 65  ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFREL 124
           ESVGE V ++K  D V+P++   CGEC+ C + K+N C K        +  DGTSRF   
Sbjct: 73  ESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFT-C 131

Query: 125 KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVG 184
           KG  I H++  S+F+EY+VV    V KI P I +      +        A   +   +  
Sbjct: 132 KGKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFVTHNLSFDEINKAFELMHSGKSI 191

Query: 185 STVAI 189
            TV  
Sbjct: 192 RTVVK 196

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score =  105 bits (263), Expect = 1e-27
 Identities = 56/189 (29%), Positives = 87/189 (46%), Gaps = 11/189 (5%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
            G PL IEEIEV PPKA E+RI+++ T +C +D+             +     HE  G+V
Sbjct: 17  TGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKALFPVVLG---HECAGIV 73

Query: 65  ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKF----GRGYRPNMPRDGTSR 120
           ESVG  V   K  D V+P F   C  C+ C S  +N C K            +  D TSR
Sbjct: 74  ESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSR 133

Query: 121 FRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAG 180
           F       I+HF+ +SSF++Y+VV   ++ ++     L +    +    +       +  
Sbjct: 134 FTCKGRS-IYHFMGVSSFSQYTVVSEANLARVDDEFDLDLLVTHALPFES---INDAIDL 189

Query: 181 VEVGSTVAI 189
           ++ G ++  
Sbjct: 190 MKEGKSIRT 198

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 99.5 bits (247), Expect = 2e-25
 Identities = 68/189 (35%), Positives = 94/189 (49%), Gaps = 11/189 (5%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
             KP  IEE+EV PPKA E+RIK++ T +C SD      +   P    PVI GHEA G+V
Sbjct: 17  EKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPL---PVIAGHEAAGIV 73

Query: 65  ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFREL 124
           ES+GE V  V+  D V+P+F   CG+CR CK  + N C K      P       +     
Sbjct: 74  ESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLK-NDLSMPRGTMQDGTSRFTC 132

Query: 125 KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPL--GIACLLSCGVSTGVGAAWKVAGVE 182
           +G  IHHFL  S+F++Y+VVD   V KI     L   I  +L       +   + +  + 
Sbjct: 133 RGKPIHHFLGTSTFSQYTVVDEISVAKIDAAFALDPLITHVLPFE---KINEGFDL--LR 187

Query: 183 VGSTVAIFG 191
            G ++    
Sbjct: 188 SGESIRTIL 196

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 89.6 bits (221), Expect = 1e-21
 Identities = 45/186 (24%), Positives = 82/186 (44%), Gaps = 5/186 (2%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
            G    ++ +++  P+  E+ +K++ T +CH+D+           +PLP + GHE  G++
Sbjct: 12  KGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQK---YPVPLPAVLGHEGSGII 68

Query: 65  ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKF-GRGYRPNMPRDGTSRFRE 123
           E++G  V E++  D V+ + +  CG+C  C +     CS+F GR +         +    
Sbjct: 69  EAIGPNVTELQVGDHVV-LSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTH 127

Query: 124 LKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEV 183
            +G V  HF   SSF  Y++    + VK+T   P                A     G+ +
Sbjct: 128 DQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQLVKFYAFDEINQAAIDSRKGITL 187

Query: 184 GSTVAI 189
              + I
Sbjct: 188 KPIIKI 193

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 81.8 bits (201), Expect = 6e-19
 Identities = 36/188 (19%), Positives = 63/188 (33%), Gaps = 20/188 (10%)

Query: 6   GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVE 65
            K     + + +P    +I IKI    +C SD+           + +P++ GHE VG V 
Sbjct: 18  WKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAG--HWGNMKMPLVVGHEIVGKVV 75

Query: 66  SVGEYVEEVKE--RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRE 123
            +G       +  + + +      C EC  CK+     C+KF   Y              
Sbjct: 76  KLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYE--------- 126

Query: 124 LKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEV 183
                   +++   +  Y  V    VV I  +I +    +   GV        +   V  
Sbjct: 127 ------DGYVSQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGVHEAF-ERMEKGDVRY 179

Query: 184 GSTVAIFG 191
             T+  + 
Sbjct: 180 RFTLVGYD 187

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 79.6 bits (195), Expect = 2e-18
 Identities = 46/168 (27%), Positives = 79/168 (47%), Gaps = 7/168 (4%)

Query: 156 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVD 215
           +PL  A +++  ++TG   A ++A +E+GS+V + G+GAVGL    GA+L  A +IIGV 
Sbjct: 1   MPLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVG 59

Query: 216 INPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSS 275
             P   E  K +G TD +N          QV+K     G D      G +  ++ A    
Sbjct: 60  SRPICVEAAKFYGATDILNY--KNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMV 117

Query: 276 REGWGKTVILGVEMHGSPISLNSIE---ILKGRSVCGTYFGGLKPRSD 320
           + G G    +     G  + +  +E    +  +++ G    G + R++
Sbjct: 118 KPG-GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRLRAE 164

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 77.3 bits (189), Expect = 2e-17
 Identities = 46/186 (24%), Positives = 71/186 (38%), Gaps = 26/186 (13%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
            G PL IEE++V  P   ++ +KI  + +CH+D+   +    +   PLP I GHE VG V
Sbjct: 14  YGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKP-PLPFIPGHEGVGYV 72

Query: 65  ESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRE 123
            +VG  V  VKE D V +P  +  CG C  C +     C                     
Sbjct: 73  AAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQ------------------ 114

Query: 124 LKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEV 183
                   +     + EY + D  +V  +  ++   I       ++  +      AG   
Sbjct: 115 ----QNTGYSVNGGYAEYVLADPNYVGILPKNVKATIHPGKLDDINQILDQM--RAGQIE 168

Query: 184 GSTVAI 189
           G  V  
Sbjct: 169 GRIVLE 174

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 76.9 bits (188), Expect = 3e-17
 Identities = 40/186 (21%), Positives = 71/186 (38%), Gaps = 18/186 (9%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
             +PL   +I    P   +++I+I    +CHSD+   +  ++      P + GHE VG V
Sbjct: 9   AKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVR--SEWAGTVYPCVPGHEIVGRV 66

Query: 65  ESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRE 123
            +VG+ VE+    DLV +      C  C +C+    N C      Y    P +       
Sbjct: 67  VAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEP------ 120

Query: 124 LKGDVIHHFLNISSFTEYSVVDITHVVKITPH-IPLGIACLLSCGVSTGVGAAWKVAGVE 182
                      +  +++  VV   +V++I    I +  A  ++      +    K   V 
Sbjct: 121 --------GHTLGGYSQQIVVHERYVLRIRVADIEMIRADQINEAYERMLRGDVKYRFVI 172

Query: 183 VGSTVA 188
              T+ 
Sbjct: 173 DNRTLT 178

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 74.1 bits (181), Expect = 3e-16
 Identities = 47/192 (24%), Positives = 78/192 (40%), Gaps = 28/192 (14%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
             +PLV +E E+       I ++IL   +C SDV  ++   + P++PLP+I GHE  G V
Sbjct: 13  FNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFR--GEDPRVPLPIILGHEGAGRV 70

Query: 65  ESVGEYVEEVKERD-----LVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTS 119
             V     ++         L++      CGEC  CK SK        + Y  N    G S
Sbjct: 71  VEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGIN---RGCS 127

Query: 120 RFRELKGDVIHHFLNISSFTEYSVVDI-THVVKITPHIPLGIACLLSCGVSTGVGAAWKV 178
            +  L+G           ++ + V+D  T V+K++  I   +   L          A ++
Sbjct: 128 EYPHLRG----------CYSSHIVLDPETDVLKVSEKITHRLP--LKEAN-----KALEL 170

Query: 179 AGVEVGSTVAIF 190
                   V ++
Sbjct: 171 MESREALKVILY 182

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.8 bits (180), Expect = 3e-16
 Identities = 31/193 (16%), Positives = 58/193 (30%), Gaps = 27/193 (13%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDV-TFWKSSTDLPKLPLPVIFGHEAVGV 63
           PG  L +E   +  P   E+ +++    +C SDV  +         +  P++ GHEA G 
Sbjct: 16  PGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGT 74

Query: 64  VESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRE 123
           VE VG  V+ +K  D V             CK  + N          P            
Sbjct: 75  VEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDG-------- 126

Query: 124 LKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEV 183
                        +   +   +     K+  ++   +        +     A++     +
Sbjct: 127 -------------NLCRFYKHNAAFCYKLPDNVKPLVTHRFPLEKAL---EAFETFKKGL 170

Query: 184 GSTVAIFGLGAVG 196
           G  + +       
Sbjct: 171 GLKIML-KCDPSD 182

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 69.6 bits (169), Expect = 1e-14
 Identities = 37/176 (21%), Positives = 68/176 (38%), Gaps = 4/176 (2%)

Query: 158 LGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 217
           L +  +  C  +T   A  +      G TV I G G +GL     AR   A  +I +  +
Sbjct: 3   LDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGS 62

Query: 218 PEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSR 276
           P + ++ ++ G    +N      +   + I ++T G GAD+  E  G +  + +     R
Sbjct: 63  PNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLR 122

Query: 277 EGWGKTVILGVEMHGSPISLNSIE--ILKGRSVCGTYFGGLKPRSDIATLAQKYLD 330
            G G   + GV +   P+     E  +LK  +  G +           ++  +   
Sbjct: 123 RG-GFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSRNYQ 177

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 68.8 bits (167), Expect = 2e-14
 Identities = 42/191 (21%), Positives = 68/191 (35%), Gaps = 29/191 (15%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWK------SSTDLPKLPLPVIFGH 58
            GKPL ++EI V  PK  ++ IK+    +CHSDV   +         +   + LPV  GH
Sbjct: 9   IGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGH 68

Query: 59  EAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGT 118
           E  G +E VG+ V    + DLV     +  G C  C+  + + C         +    G 
Sbjct: 69  EIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLC--------DSPRWLGI 120

Query: 119 SRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKV 178
           +                  + EY +V     +     +   I   +    +       + 
Sbjct: 121 NFDGA--------------YAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANEAIDNLEN 166

Query: 179 AGVEVGSTVAI 189
               +G  V I
Sbjct: 167 FKA-IGRQVLI 176

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 66.2 bits (160), Expect = 1e-13
 Identities = 37/186 (19%), Positives = 68/186 (36%), Gaps = 23/186 (12%)

Query: 7   KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLP-LPVIFGHEAVGVVE 65
             L +E+  +  PK  E+ +++    +C SDV +++       +   P++ GHEA G V 
Sbjct: 11  NDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVV 70

Query: 66  SVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELK 125
            VG+ V+ +K+ D V       C  C+ CK  K N C                       
Sbjct: 71  KVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDL-------------------- 110

Query: 126 GDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGS 185
                   +  +   Y V       K+  +  +      S  +   V  A++ A  +  +
Sbjct: 111 -TFCATPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVD-AFEAARKKADN 168

Query: 186 TVAIFG 191
           T+ +  
Sbjct: 169 TIKVMI 174

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 65.8 bits (159), Expect = 1e-13
 Identities = 42/188 (22%), Positives = 62/188 (32%), Gaps = 28/188 (14%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
             +PL I+E+E       E+ ++I                    K  LP+I GHE VG+V
Sbjct: 9   FKEPLKIKEVEKPTISYGEVLVRIKACG-VCHTDLHAAHGDWPVKPKLPLIPGHEGVGIV 67

Query: 65  ESVGEYVEEVKERDLV-LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRE 123
           E VG  V  +K  D V +P  +  CG C  C S +   C                     
Sbjct: 68  EEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQ------------------ 109

Query: 124 LKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEV 183
                   +     + EY      +VVKI  +  + +  L    ++       K  G   
Sbjct: 110 ----KNAGYSVDGGYAEYCRAAADYVVKIPDNTIIEVQPLE--KINEVFDRMLK--GQIN 161

Query: 184 GSTVAIFG 191
           G  V    
Sbjct: 162 GRVVLTLE 169

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 63.7 bits (154), Expect = 1e-12
 Identities = 45/193 (23%), Positives = 70/193 (36%), Gaps = 24/193 (12%)

Query: 161 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK 220
              LS  + TG   A   AGV  GSTV + G G VGLA A  ARL  A+ +I  D+NP +
Sbjct: 4   LTCLSDILPTGYHGA-VTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPAR 62

Query: 221 FEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGL--------------- 264
               K  G           D  + + I  +      D   + +G                
Sbjct: 63  LAHAKAQGFEIADLS---LDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAP 119

Query: 265 TSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSV-CGTYFG-GLKPRSDIA 322
            +V+N     +R   GK  I G+ +   P ++++   +   S+  G  +       +   
Sbjct: 120 ATVLNSLMQVTRVA-GKIGIPGLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQT 178

Query: 323 TLAQKYLDKELNL 335
               KY    +  
Sbjct: 179 -PVMKYNRALMQA 190

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.1 bits (142), Expect = 4e-11
 Identities = 23/149 (15%), Positives = 61/149 (40%), Gaps = 9/149 (6%)

Query: 164 LSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEI 223
           LS G+      A +  GV +G  V + G G +G+     A+   A++++  D++  +   
Sbjct: 12  LSVGI-----HACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSK 66

Query: 224 GKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTV 283
            K+ G    +  +    + +++ ++       +   EC G  + +     ++R G     
Sbjct: 67  AKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG---GT 123

Query: 284 ILGVEMHGSPISLNSIEI-LKGRSVCGTY 311
           ++ V +     ++  +   ++   + G +
Sbjct: 124 LVLVGLGSEMTTVPLLHAAIREVDIKGVF 152

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 58.4 bits (140), Expect = 1e-10
 Identities = 27/210 (12%), Positives = 58/210 (27%), Gaps = 30/210 (14%)

Query: 5   PGKPLVIEEIEV-------EPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG 57
            GK + +++I+               + +K++ T++C SD    +  T      +     
Sbjct: 10  SGK-VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTAQVGLVLGHEI 68

Query: 58  HEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDG 117
              V       E ++      +   +    C  C++  +    T +    G        G
Sbjct: 69  TGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMG 128

Query: 118 TSRFRELKGDVIHHFLNISSFTEYSVVD--ITHVVKITPHIPLGIACLLSCGVSTGVGAA 175
                                 EY +V     +++K+           ++  V   V + 
Sbjct: 129 DWTG---------------GQAEYVLVPYADFNLLKLPDRDKAMEKINIAEVVGVQVISL 173

Query: 176 WKVAGVEVGSTVAIFGLGAVGLAVAEGARL 205
              A    G     F  G     V +  + 
Sbjct: 174 DD-APRGYG----EFDAGVPKKFVIDPHKT 198

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 57.8 bits (138), Expect = 1e-10
 Identities = 39/187 (20%), Positives = 73/187 (39%), Gaps = 26/187 (13%)

Query: 5   PGKPLVIEEIEV-EPPKAWEIRIKILCTSLCHSDVTFWK-SSTDLPKLPLPVIFGHEAVG 62
             KPL IE+++       +++ ++I    +CH+D+   +    +L +  LP   GHE VG
Sbjct: 8   YNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVG 67

Query: 63  VVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFR 122
            +E V E VE +++ D V+       G C  C++ +   C         N+   G +   
Sbjct: 68  YIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHC--------ENLEFPGLNIDG 119

Query: 123 ELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVE 182
                          F E+       V+K+   + + +       ++  +    K  G  
Sbjct: 120 G--------------FAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERLEK--GEV 163

Query: 183 VGSTVAI 189
           +G  V I
Sbjct: 164 LGRAVLI 170

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 56.5 bits (135), Expect = 3e-10
 Identities = 28/150 (18%), Positives = 56/150 (37%), Gaps = 10/150 (6%)

Query: 164 LSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEI 223
           LS GV      A + AGV++G+TV + G G +GL     A+   A  +        + E+
Sbjct: 12  LSVGV-----HACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPR-RLEV 65

Query: 224 GKKFGITDFINPATCGDKTVSQVIK--EMTDGGADYCFECIGLTSVMNDAFNSSREGWGK 281
            K  G    +      ++  S + +         +   +C G    +    N +R   G 
Sbjct: 66  AKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRT-GGT 124

Query: 282 TVILGVEMHGSPISLNSIEILKGRSVCGTY 311
            +++G+      + L +    +   +   +
Sbjct: 125 LMLVGMGSQMVTVPLVNA-CAREIDIKSVF 153

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 54.2 bits (129), Expect = 2e-09
 Identities = 34/198 (17%), Positives = 59/198 (29%), Gaps = 35/198 (17%)

Query: 5   PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVV 64
             K L   E E     +++  ++ L  S C SD+               +I GHEAVG V
Sbjct: 9   INK-LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVF--EGALGDRKNMILGHEAVGEV 65

Query: 65  ESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFREL 124
             VG  V++ K  D V+           + ++      +    G++ +  +DG       
Sbjct: 66  VEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGV------ 119

Query: 125 KGDVIHHFLNISSFTEYSVVDI--THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVE 182
                        F EY  V+    ++  +   + L            G           
Sbjct: 120 -------------FGEYFHVNDADMNLAILPKDVDLSKLVTHVY---HGFDHI------- 156

Query: 183 VGSTVAIFGLGAVGLAVA 200
               + +       L  A
Sbjct: 157 -EEALLLMKDKPKDLIKA 173

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 53.5 bits (127), Expect = 3e-09
 Identities = 37/162 (22%), Positives = 58/162 (35%), Gaps = 10/162 (6%)

Query: 156 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVD 215
           IP  +A  L CG  T V +     G   G  V I GLG +G      ++    ++   + 
Sbjct: 1   IPSHLAAPLLCGGLT-VYSPLVRNGCGPGKKVGIVGLGGIGSMGTLISK-AMGAETYVIS 58

Query: 216 INPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG-LTSVMNDAFNS 274
            +  K E   K G   +I     GD        E      D    C   LT +  +    
Sbjct: 59  RSSRKREDAMKMGADHYIATLEEGD------WGEKYFDTFDLIVVCASSLTDIDFNIMPK 112

Query: 275 SREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLK 316
           + +  G+ V + +      +SL     LK  S+  +  G +K
Sbjct: 113 AMKVGGRIVSISIPEQHEMLSLKPY-GLKAVSISYSALGSIK 153

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 131

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 38.7 bits (89), Expect = 2e-04
 Identities = 7/56 (12%), Positives = 18/56 (32%)

Query: 5  PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEA 60
           G PL + ++     +  E+ +++    L  +D      +      P  +      
Sbjct: 9  LGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVV 64

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 183

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 37.3 bits (85), Expect = 0.001
 Identities = 24/155 (15%), Positives = 42/155 (27%), Gaps = 4/155 (2%)

Query: 161 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK 220
           A        T   +  +V  +  G  V I          A        ++I     +  K
Sbjct: 3   AATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAK 62

Query: 221 FEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWG 280
            E+  + G+    +         +  I E+TDG              +         G G
Sbjct: 63  REMLSRLGVEYVGD---SRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPG-G 118

Query: 281 KTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGL 315
           + + LG +   +  SL    + K  S         
Sbjct: 119 RFIELGKKDVYADASLGLAALAKSASFSVVDLDLN 153

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} Length = 196

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

 Score = 35.7 bits (81), Expect = 0.004
 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 187 VAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFE 222
           +A+ G G VGL++     L+  +++  VDI P K +
Sbjct: 3   IAVAGSGYVGLSLG--VLLSLQNEVTIVDILPSKVD 36

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	371
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	100.0
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	100.0
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	100.0
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	100.0
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	100.0
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.98
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	99.97
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.97
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.97
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.97
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	99.97
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	99.97
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.97
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.97
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.96
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.96
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.96
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.96
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.95
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.95
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.95
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.95
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.94
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.94
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.94
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.94
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.94
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.93
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.93
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.93
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.93
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.93
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.93
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.93
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.92
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.92
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.92
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.92
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.92
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.92
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.91
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.91
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.91
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.91
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.9
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.89
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.89
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.88
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.87
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.86
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.86
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.84
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.54
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.51
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.51
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	98.15
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	98.13
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	97.8
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.79
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	97.74
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	97.73
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.64
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	97.62
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	97.5
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	97.48
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	97.47
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.43
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	97.41
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	97.41
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.4
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	97.38
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	97.37
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	97.37
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.35
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	97.35
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.34
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.31
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	97.3
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	97.29
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	97.28
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	97.26
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	97.25
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	97.23
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	97.23
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	97.19
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	97.19
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.19
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	97.18
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	97.15
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	97.13
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	97.12
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	97.12
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	97.08
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	97.05
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	97.05
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	97.05
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	97.03
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	97.03
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.01
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	97.01
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	96.99
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	96.98
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	96.94
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	96.93
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	96.92
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	96.89
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	96.89
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	96.89
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	96.87
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	96.85
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	96.85
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	96.85
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	96.84
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.83
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	96.83
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	96.82
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.8
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	96.76
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	96.75
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.73
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	96.72
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	96.71
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	96.69
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	96.66
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	96.61
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	96.6
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.58
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	96.56
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.52
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	96.51
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	96.5
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.48
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	96.47
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	96.45
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	96.42
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	96.35
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	96.33
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	96.32
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	96.27
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.27
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	96.23
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	96.21
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	96.2
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	96.17
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	96.17
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	96.09
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.09
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	96.07
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	96.02
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	96.01
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	96.0
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	95.89
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	95.77
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.71
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.58
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	95.51
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	95.46
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	95.45
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	95.41
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.37
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	95.34
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.32
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	95.31
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	95.31
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.28
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	95.22
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	95.2
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	95.1
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	95.09
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	95.08
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	95.06
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	95.01
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	95.0
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	94.92
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	94.91
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	94.86
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	94.81
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	94.75
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	94.63
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.59
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	94.54
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	94.52
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	94.52
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	94.48
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	94.42
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	94.35
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	94.33
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	94.31
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	94.23
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	94.2
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	94.18
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	94.16
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	94.08
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	94.07
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	94.01
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	93.91
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	93.9
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	93.84
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	93.8
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	93.74
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	93.69
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	93.68
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	93.68
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	93.59
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	93.58
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	93.56
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	93.56
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	93.52
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	93.51
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	93.51
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	93.5
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	93.42
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	93.35
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	93.27
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	93.26
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	93.21
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	93.15
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	93.11
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	93.1
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	93.09
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	93.03
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	93.0
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	92.92
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	92.87
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	92.83
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	92.83
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	92.73
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	92.71
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	92.65
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	92.53
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	92.51
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	92.5
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	92.47
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	92.42
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	92.33
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	92.28
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	92.23
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	92.2
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	92.11
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	92.07
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	92.02
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	92.0
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	91.96
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	91.9
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	91.9
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	91.83
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	91.8
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	91.79
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	91.77
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	91.69
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	91.67
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	91.67
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.63
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	91.51
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	91.47
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	91.47
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	91.46
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	91.34
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	91.24
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	91.16
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	91.12
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	91.11
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	91.1
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	91.07
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	91.04
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	91.02
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	90.9
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	90.86
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	90.85
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	90.65
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	90.6
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	90.59
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	90.54
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	90.47
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	90.46
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	90.43
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	90.4
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	90.29
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	90.2
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	90.2
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.07
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	90.04
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	90.03
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	89.97
d2fcaa1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil	89.93
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	89.68
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	89.46
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	89.38
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	89.3
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	89.26
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	89.23
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	88.96
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	88.88
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	88.82
d1sqga2	284	Ribosomal RNA small subunit methyltransferase B, R	88.79
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	88.77
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	88.61
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	88.56
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	88.53
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.52
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	88.39
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	88.39
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	88.31
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	88.18
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	88.12
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	87.99
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	87.96
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	87.86
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	87.8
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	87.74
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.73
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	87.7
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	87.59
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	87.47
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	87.41
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	87.34
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	87.1
d1jqea_	280	Histamine methyltransferase {Human (Homo sapiens)	86.93
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	86.77
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	86.72
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	86.5
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	86.47
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	86.32
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	85.86
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	85.83
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	85.79
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	85.74
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	85.69
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	85.67
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	85.61
d1wkva1	382	O-acetylserine sulfhydrylase (Cysteine synthase) {	85.45
d1qzza2	256	Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu	85.33
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	85.31
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	85.23
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	85.21
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	85.13
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	85.03
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	84.99
d1vlma_	208	Possible histamine N-methyltransferase TM1293 {The	84.81
d1ixka_	313	Hypothetical methyltransferase PH1374 {Archaeon Py	84.79
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	84.66
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	84.52
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	84.48
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	84.38
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	84.27
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	84.22
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	84.17
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	83.85
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	83.8
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	83.77
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	83.63
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	83.61
d1np3a2	182	Class I ketol-acid reductoisomerase (KARI) {Pseudo	83.5
d2dula1	375	N(2),N(2)-dimethylguanosine tRNA methyltransferase	83.42
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	83.36
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	83.27
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	82.99
d3lada1	229	Dihydrolipoamide dehydrogenase {Azotobacter vinela	82.87
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	82.84
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	82.65
d2g72a1	263	Phenylethanolamine N-methyltransferase, PNMTase {H	82.52
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	82.33
d1h6va1	235	Mammalian thioredoxin reductase {Rat (Rattus norve	82.13
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	82.04
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	81.85
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	81.76
d2a14a1	257	Indolethylamine N-methyltransferase, INMT {Human (	81.51
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	81.49
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	81.48
d2b4ro1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	81.25
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	81.04
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	80.98
d2bs2a2	336	Fumarate reductase {Wolinella succinogenes [TaxId:	80.98
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	80.95
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	80.89
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	80.67
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	80.61
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	80.4
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	80.25

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=100.00  E-value=3.5e-35  Score=250.75  Aligned_cols=186  Identities=37%  Similarity=0.559  Sum_probs=163.0

Q ss_pred             CccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEe
Q 017457            2 QRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVL   81 (371)
Q Consensus         2 ~~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~   81 (371)
                      .++++++|+++|++.|+|+++||||||.|++||++|++.+.|.....  .+|.++|||++|+|+++|+++++|++||||+
T Consensus        14 ~~~~~~pl~i~ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~~~~~--~~p~i~GhE~~G~v~~vG~~v~~~~~GdrV~   91 (199)
T d1cdoa1          14 AWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKD--GFPVVLGHEGAGIVESVGPGVTEFQPGEKVI   91 (199)
T ss_dssp             BCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCTT--SCSEECCCCEEEEEEEECTTCCSCCTTCEEE
T ss_pred             EecCCCCcEEEEEECCCCCCCEEEEEEEEEEEecchhhhhhhccccc--ccccccccccceEEEEEcCCCceecCCCEEE
Confidence            46778889999999999999999999999999999999999976655  7899999999999999999999999999999


Q ss_pred             eccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchh
Q 017457           82 PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA  161 (371)
Q Consensus        82 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~a  161 (371)
                      +.+...|+.|++|+.+.+++|.........+....|..+. ..+|..++++.+.|+|+||+++++++++++|++++++++
T Consensus        92 ~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~Ggfaey~~v~~~~~~~iP~~~~~~~a  170 (199)
T d1cdoa1          92 PLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRF-TCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEF  170 (199)
T ss_dssp             ECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCE-EETTEEEEEGGGTCCSBSEEEEEGGGEEECCTTSCCGGG
T ss_pred             EeeeccccccccccCCCcccccccccccccccccCcccce-eeccceeecccccCCceEEEEEchHHEEECCCCCCHHHH
Confidence            9999999999999999999998866544444444443222 234555566666789999999999999999999999999


Q ss_pred             hccccchhhhHHHHHHHcCCCCCCeEEEE
Q 017457          162 CLLSCGVSTGVGAAWKVAGVEVGSTVAIF  190 (371)
Q Consensus       162 a~~~~~~~ta~~~l~~~~~~~~g~~VLI~  190 (371)
                      |++.+++.|+++++......+.|++|||+
T Consensus       171 a~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         171 ITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             EEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            99999999999998888889999999984

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=100.00  E-value=1.9e-34  Score=244.60  Aligned_cols=184  Identities=24%  Similarity=0.514  Sum_probs=148.3

Q ss_pred             CccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEe
Q 017457            2 QRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVL   81 (371)
Q Consensus         2 ~~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~   81 (371)
                      ..+.+++|+++++|.|+|+++||||||.+++||++|++++.|.++.   ++|+++|||++|+|+++|+++++|++||+|+
T Consensus         9 ~~~~g~~l~l~~v~~P~p~~geVlVkv~a~gic~sD~~~~~G~~~~---~~P~i~GHE~~G~V~~vG~~v~~~~vGDrVv   85 (194)
T d1f8fa1           9 TPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPV---PLPAVLGHEGSGIIEAIGPNVTELQVGDHVV   85 (194)
T ss_dssp             BCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSCC---CSSBCCCCEEEEEEEEECTTCCSCCTTCEEE
T ss_pred             EcCCCCCcEEEEeeCCCCCCCEEEEEEEEEEecCchHhhhhhcccc---cCCcccccceEEEeeecCccceeEccCceee
Confidence            4667888999999999999999999999999999999999988653   6899999999999999999999999999996


Q ss_pred             eccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccc-CCceeecccCcccccceeeeecceeEECCCCCCcch
Q 017457           82 PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFREL-KGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI  160 (371)
Q Consensus        82 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~-~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~  160 (371)
                      ..+ ..|++|++|+++.+++|+........|...+|...+... .+....++.+.|+|+||+++++.+++++|+++++++
T Consensus        86 ~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~~~~~ip~~i~~~~  164 (194)
T d1f8fa1          86 LSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQ  164 (194)
T ss_dssp             ECC-CCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECTTCCGGG
T ss_pred             eec-ccccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccccceeEEEehHHEEECCCCCCccc
Confidence            655 489999999999999998743211233344442222222 234455566778999999999999999999988654


Q ss_pred             hhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEE
Q 017457          161 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGV  214 (371)
Q Consensus       161 aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~  214 (371)
                      +                         ++|.|+|++|++|+|+|+.+|+++|+++
T Consensus       165 ~-------------------------~~i~g~g~~g~~aiq~a~~~g~~~iiaV  193 (194)
T d1f8fa1         165 L-------------------------VKFYAFDEINQAAIDSRKGITLKPIIKI  193 (194)
T ss_dssp             G-------------------------EEEEEGGGHHHHHHHHHHTSCSEEEEEC
T ss_pred             E-------------------------EEEeCcHHHHHHHHHHHHHcCCCEEEEe
Confidence            3                         4556789999999999999999666654

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=100.00  E-value=4.4e-34  Score=243.07  Aligned_cols=186  Identities=39%  Similarity=0.585  Sum_probs=159.5

Q ss_pred             CccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEe
Q 017457            2 QRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVL   81 (371)
Q Consensus         2 ~~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~   81 (371)
                      +.+++++|+++++|.|+|+++||||||++++||++|+++++|.+...  .+|.++|||++|+|+++|++|+++++||+|+
T Consensus        12 ~~~~g~~l~i~evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~~~~~--~~p~v~GhE~~G~V~~vG~~V~~~~~GdrV~   89 (197)
T d2fzwa1          12 AWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEG--CFPVILGHLGAGIVESVGEGVTKLKAGDTVI   89 (197)
T ss_dssp             BCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTC--CSSBCCCCEEEEEEEEECTTCCSCCTTCEEE
T ss_pred             EccCCCCCEEEEEECCCCCCCEEEEEEEEecCCCCcHHHHcCCcccc--cccccCCcceeeEEEeecCCceecCCCCEEE
Confidence            56788899999999999999999999999999999999999987666  7999999999999999999999999999999


Q ss_pred             eccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchh
Q 017457           82 PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA  161 (371)
Q Consensus        82 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~a  161 (371)
                      +.+...|+.|.+|..+.++.|.........+...+.+.++ ..+|..+.++.+.|+|+||+++++.+++++|++++++++
T Consensus        90 v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~-~~~g~~v~~~~g~GgfAey~vvp~~~~~~vp~~l~~~~a  168 (197)
T d2fzwa1          90 PLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRF-TCKGKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEF  168 (197)
T ss_dssp             ECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSE-EETTEEEBCCTTTCCSBSEEEEEGGGEEECCTTSCSGGG
T ss_pred             EccccccccccccccCccccCccccccccccccCCcccee-ccCCcceecccccccceeEEEechHHEEECCCCCCHHHH
Confidence            9999999999999999999998755432234444432222 233555666777789999999999999999999999999


Q ss_pred             hccccchhhhHHHHHHHcCCCCCCeEEEE
Q 017457          162 CLLSCGVSTGVGAAWKVAGVEVGSTVAIF  190 (371)
Q Consensus       162 a~~~~~~~ta~~~l~~~~~~~~g~~VLI~  190 (371)
                      |.+.+++.|++.++.....-+.+++|||+
T Consensus       169 a~~~~~~~t~~~a~~~~~~g~~~~tvvvi  197 (197)
T d2fzwa1         169 VTHNLSFDEINKAFELMHSGKSIRTVVKI  197 (197)
T ss_dssp             EEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             hhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence            99999999999976555556778899884

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=100.00  E-value=1.9e-34  Score=242.15  Aligned_cols=166  Identities=23%  Similarity=0.343  Sum_probs=147.1

Q ss_pred             CCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCC-CCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457            5 PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-PKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI   83 (371)
Q Consensus         5 ~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~   83 (371)
                      +.++|+++++|.|+|+++|||||+++++||++|++.+++.... ....+|+++|||++|+|+++|+++++|++||+|++.
T Consensus         9 g~~~l~~~e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v~~~~~GdrV~~~   88 (178)
T d1e3ja1           9 KQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKKGDRVAVE   88 (178)
T ss_dssp             ETTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSCCTTCEEEEC
T ss_pred             cCCcEEEEEeECCCCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCcccCCCCCCCEEEEC
Confidence            3455999999999999999999999999999999998875432 223688999999999999999999999999999999


Q ss_pred             cCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhc
Q 017457           84 FHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL  163 (371)
Q Consensus        84 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~  163 (371)
                      +...|+.|.+|..+.++.|......  .+...+                   |+|+||+++++++++++|+++++++++.
T Consensus        89 ~~~~~~~c~~c~~g~~~~c~~~~~~--~~~~~~-------------------G~~aey~~v~~~~~~~iP~~~~~~~aa~  147 (178)
T d1e3ja1          89 PGVPCRRCQFCKEGKYNLCPDLTFC--ATPPDD-------------------GNLARYYVHAADFCHKLPDNCNVKQLVT  147 (178)
T ss_dssp             CEECCSSSHHHHTTCGGGCTTCEET--TBTTBC-------------------CSCBSEEEEEGGGEEECCTTCCCGGGEE
T ss_pred             cccccCCccccccCCccccccccce--eccccc-------------------cccceeeeecccceeeCCCCCCHHHHHH
Confidence            9999999999999999999877752  222334                   4999999999999999999999999999


Q ss_pred             cccchhhhHHHHHHHcCCCCCCeEEEEcC
Q 017457          164 LSCGVSTGVGAAWKVAGVEVGSTVAIFGL  192 (371)
Q Consensus       164 ~~~~~~ta~~~l~~~~~~~~g~~VLI~G~  192 (371)
                      +++.+.|||+++ +.+++++|++|+|+|+
T Consensus       148 ~~~~~~ta~~a~-~~~~~~~g~~VlVig~  175 (178)
T d1e3ja1         148 HSFKLEQTVDAF-EAARKKADNTIKVMIS  175 (178)
T ss_dssp             EEEEGGGHHHHH-HHHHHCCTTCSEEEEE
T ss_pred             HHhHHHHHHHHH-HHhCCCCCCEEEEEcc
Confidence            999999999974 7889999999999975

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=100.00  E-value=3.1e-33  Score=232.82  Aligned_cols=163  Identities=23%  Similarity=0.402  Sum_probs=146.2

Q ss_pred             ccCCCCcEEEEEecCCC-CCCeEEEEEeEeecccccccccccCCCC-CCCCCCccccccccEEEEEeCCCCCCcCCCCEE
Q 017457            3 RIPGKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDL-PKLPLPVIFGHEAVGVVESVGEYVEEVKERDLV   80 (371)
Q Consensus         3 ~~~~~~l~~~~~~~~~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V   80 (371)
                      .+.+++|++++++.|++ +++||||||+|++||++|++.+.|.+.. ..+.+|+++|||++|+|+++|++++++++||||
T Consensus         6 ~~~g~pl~i~~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~~GdrV   85 (171)
T d1h2ba1           6 HEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLEKGDPV   85 (171)
T ss_dssp             SSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCCSCCTTCEE
T ss_pred             EeCCCCCEEEEeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeeeecccCCCCcCCCCCEE
Confidence            45677899999999986 6899999999999999999999987632 122789999999999999999999999999999


Q ss_pred             eeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcch
Q 017457           81 LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI  160 (371)
Q Consensus        81 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~  160 (371)
                      ++.+...|++|..|..+.+++|.....   .|+..+|                   +|+||+.+++++++++|++++++.
T Consensus        86 ~~~~~~~cg~~~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~iP~~~~~e~  143 (171)
T d1h2ba1          86 ILHPAVTDGTCLACRAGEDMHCENLEF---PGLNIDG-------------------GFAEFMRTSHRSVIKLPKDVRVEV  143 (171)
T ss_dssp             EECSCBCCSCSHHHHTTCGGGCTTCBC---BTTTBCC-------------------SSBSEEEECGGGEEECCTTCCCCE
T ss_pred             EEcCccCCCCccccccccccccccccc---ceeeccc-------------------ccceeeeehhhcceecCCCCCHHH
Confidence            999999999999999999999988775   6777776                   999999999999999999999988


Q ss_pred             hhccccchhhhHHHHHHHcCCCCCCeEEE
Q 017457          161 ACLLSCGVSTGVGAAWKVAGVEVGSTVAI  189 (371)
Q Consensus       161 aa~~~~~~~ta~~~l~~~~~~~~g~~VLI  189 (371)
                      ++++.+++.|||+++ +.+.+ .|++|||
T Consensus       144 aa~~~~~~~ta~~al-~~~~~-~G~~VlI  170 (171)
T d1h2ba1         144 DIHKLDEINDVLERL-EKGEV-LGRAVLI  170 (171)
T ss_dssp             EEEEGGGHHHHHHHH-HTTCC-SSEEEEE
T ss_pred             HHHHHhHHHHHHHHH-HhcCC-CCCEEEe
Confidence            888888999999976 56777 8999998

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.98  E-value=2.7e-32  Score=233.61  Aligned_cols=180  Identities=35%  Similarity=0.599  Sum_probs=151.4

Q ss_pred             CccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEe
Q 017457            2 QRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVL   81 (371)
Q Consensus         2 ~~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~   81 (371)
                      ..+++++|+++++|.|+|+++||||||++++||++|+++++|.++.   .+|.++|||++|+|+++|++|+++++||+|+
T Consensus        14 ~~~~g~pl~i~evp~P~p~~geVlVkv~a~gic~sD~~~~~G~~~~---~~P~v~GHE~~G~V~~vG~~V~~~~~GdrV~   90 (202)
T d1e3ia1          14 AWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKA---LFPVVLGHECAGIVESVGPGVTNFKPGDKVI   90 (202)
T ss_dssp             BCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTTSCC---CSSBCCCCEEEEEEEEECTTCCSCCTTCEEE
T ss_pred             EccCCCCCEEEEEECCCCCCCEEEEEEEEEEEeccccceeeeeccc---ccccccccccceEEeeecCCceeccCCCEEE
Confidence            4567788999999999999999999999999999999999997653   5899999999999999999999999999999


Q ss_pred             eccCCCCCCCccccCCCCCCCCCCCCCCCCCCC-------CCCCccccccCCceeecccCcccccceeeeecceeEECCC
Q 017457           82 PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP-------RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP  154 (371)
Q Consensus        82 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~-------~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~  154 (371)
                      +.+...|+.|.+|..+.+++|.....   .++.       ..+...+ ...|..++++.+.|+|+||+++++.+++++|+
T Consensus        91 ~~~~~~c~~c~~c~~g~~~~C~~~~~---~~~~~~~~~~~~~~~~~~-~~~g~~v~~~~~~G~faey~~v~~~~l~~lP~  166 (202)
T d1e3ia1          91 PFFAPQCKRCKLCLSPLTNLCGKLRN---FKYPTIDQELMEDRTSRF-TCKGRSIYHFMGVSSFSQYTVVSEANLARVDD  166 (202)
T ss_dssp             ECSSCCCSSSHHHHCTTCCCCTTCCC---SSCGGGSSCSCTTSCCSE-EETTEEEBCCTTTCCSBSEEEEEGGGEEECCT
T ss_pred             EEeeccccccccccCCcccccccccc---cccCccceeccccccccc-ccCceeeecccccCCceEEEEEehhhEEECCC
Confidence            99999999999999999999987664   2221       1111111 22355566677779999999999999999999


Q ss_pred             CCCcchhhccccchhhhHHHHHHHcCCCCCCeEEEEc
Q 017457          155 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFG  191 (371)
Q Consensus       155 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G  191 (371)
                      +++++.++++.+++.+++.++.   .+++|++|.|+.
T Consensus       167 ~~~~~~~~~~~~~~~~~~~a~~---~~k~G~~V~vi~  200 (202)
T d1e3ia1         167 EFDLDLLVTHALPFESINDAID---LMKEGKSIRTIL  200 (202)
T ss_dssp             TSCGGGGEEEEEEGGGHHHHHH---HHHTTCCSEEEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCCCCEEEEEE
Confidence            9999988888888888877653   257899887763

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.3e-32  Score=232.01  Aligned_cols=167  Identities=19%  Similarity=0.259  Sum_probs=140.8

Q ss_pred             CccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCC-CCCCCCCccccccccEEEEEeCCCCCCcCCCCEE
Q 017457            2 QRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTD-LPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLV   80 (371)
Q Consensus         2 ~~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~-~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V   80 (371)
                      ++.+.++|+++++|.|+|+++||||||.+++||++|++.+++... .....+|+++|||++|+|+++|+++++|++||+|
T Consensus        12 V~~gp~~l~l~evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV   91 (185)
T d1pl8a1          12 VVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKPGDRV   91 (185)
T ss_dssp             EEEETTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCSCCTTCEE
T ss_pred             EEeCCCeEEEEEeECCCCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeeeEEEeccceeeecccccc
Confidence            344456699999999999999999999999999999999886532 2122688999999999999999999999999999


Q ss_pred             eeccCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcc
Q 017457           81 LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP-RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLG  159 (371)
Q Consensus        81 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~  159 (371)
                      ++.+...|+.|++|+.+++++|.....   .|.. .+                   |+|+||+++++++++++|++++++
T Consensus        92 ~~~~~~~cg~c~~c~~G~~~~c~~~~~---~g~~~~~-------------------G~~aey~~~~~~~~~~lP~~~~~~  149 (185)
T d1pl8a1          92 AIEPGAPRENDEFCKMGRYNLSPSIFF---CATPPDD-------------------GNLCRFYKHNAAFCYKLPDNVKPL  149 (185)
T ss_dssp             EECSEECSSCCHHHHTTCGGGCTTCEE---TTBTTBC-------------------CSCBSEEEEEGGGEEECCTTCGGG
T ss_pred             eecceeccccchhhccchhchhcccee---eeccccc-------------------ccceEEEEEchHHEEECCCCCCHH
Confidence            999999999999999999999987775   3332 33                   489999999999999999999999


Q ss_pred             hhhccccchhhhHHHHHHHcCCCCCCeEEEEcCCh
Q 017457          160 IACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGA  194 (371)
Q Consensus       160 ~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~  194 (371)
                      +++.++  +.+|+++ ++..++++|++||| |+|+
T Consensus       150 ~aa~~p--l~~a~~a-~~~~~~~~G~~VlI-g~GP  180 (185)
T d1pl8a1         150 VTHRFP--LEKALEA-FETFKKGLGLKIML-KCDP  180 (185)
T ss_dssp             EEEEEE--GGGHHHH-HHHHHTTCCSEEEE-ECCT
T ss_pred             HHHHHH--HHHHHHH-HHHhCCCCCCEEEE-EeCC
Confidence            987654  4566664 45677899999998 5553

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.97  E-value=3.5e-32  Score=231.41  Aligned_cols=182  Identities=42%  Similarity=0.650  Sum_probs=150.5

Q ss_pred             CccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEe
Q 017457            2 QRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVL   81 (371)
Q Consensus         2 ~~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~   81 (371)
                      +.+++++|+++|+|.|+|+++||||||.|++||++|+++++|.++.   .+|.++|||++|+|+++|++++++++||+|+
T Consensus        14 ~~~~g~~l~i~ev~~P~p~~~eVlVkv~a~gICgsDlh~~~G~~~~---~~P~i~GHE~~G~Vv~~G~~v~~~~~GdrV~   90 (198)
T d1p0fa1          14 AWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPS---KFPVILGHEAVGVVESIGAGVTCVKPGDKVI   90 (198)
T ss_dssp             BSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSCC---CSSBCCCCCEEEEEEEECTTCCSCCTTCEEE
T ss_pred             EccCCCCCEEEEEECCCCCCCEEEEEEEEEEEecccceeeeecccc---ccccccceeeeeeeeecCcccccCcCCCEEE
Confidence            4577889999999999999999999999999999999999987653   6899999999999999999999999999999


Q ss_pred             eccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchh
Q 017457           82 PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA  161 (371)
Q Consensus        82 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~a  161 (371)
                      +.+...|+.|++|..+.+++|+........|....+..++ ...+..++.+.+.|+|+||+.+++..++++|+++++..+
T Consensus        91 ~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~g~faey~~v~~~~~~kip~~~~~~~~  169 (198)
T d1p0fa1          91 PLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRF-TCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKINVNFL  169 (198)
T ss_dssp             ECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSE-EETTEEEBCSTTTCCSBSEEEEETTSEEEECTTSCGGGG
T ss_pred             EEeeccccccccccccccccchhhhccccccccCCCceeE-eeCCeeccccCCCccceeeEEecHHHEEECCCCCCHHHH
Confidence            9999999999999999999999877654444544443333 234555666666789999999999999999999998776


Q ss_pred             hccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHH
Q 017457          162 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGL  197 (371)
Q Consensus       162 a~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~  197 (371)
                      +...+...+          +.++++|||.|+|++|+
T Consensus       170 ~~~~~~~~~----------v~~~~~vlv~G~G~iGl  195 (198)
T d1p0fa1         170 VSTKLTLDQ----------INKAFELLSSGQGVRSI  195 (198)
T ss_dssp             EEEEECGGG----------HHHHHHHTTTSSCSEEE
T ss_pred             HHhhcchhh----------cCCCCEEEEECCCcceE
Confidence            654443332          33445688888888765

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.97  E-value=7.8e-32  Score=225.54  Aligned_cols=163  Identities=28%  Similarity=0.414  Sum_probs=144.1

Q ss_pred             ccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEee
Q 017457            3 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP   82 (371)
Q Consensus         3 ~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~   82 (371)
                      .+++++++++++|.|.|++|||||||++++||++|++.++|.++... .+|.++|||++|+|+++|++++++++||+|++
T Consensus        12 ~~~g~pl~l~evp~P~~~~~evlVkv~a~gic~~D~~~~~G~~~~~~-~~P~i~GhE~~G~V~~~G~~v~~~~~GdrV~~   90 (175)
T d1llua1          12 HAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKP-PLPFIPGHEGVGYVAAVGSGVTRVKEGDRVGI   90 (175)
T ss_dssp             CSTTSCCEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHHTCSSSCC-CSSBCCCSCEEEEEEEECTTCCSCCTTCEEEE
T ss_pred             EeCCCCCEEEEeECCCCCCCEEEEEEEEecCcccchhhhccCccccc-cCCcCCCCcceEEEEEeCCCccccccCCEEEe
Confidence            45577799999999999999999999999999999999999876433 78999999999999999999999999999987


Q ss_pred             cc-CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchh
Q 017457           83 IF-HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA  161 (371)
Q Consensus        83 ~~-~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~a  161 (371)
                      .+ ...|+.|.+|..+.++.|.....   .|+..+|                   +|+||+.+++++++++|++++++.+
T Consensus        91 ~~~~~~~g~~~~~~~g~~~~~~~~~~---~G~~~~g-------------------g~aey~~v~~~~~~~iPd~l~~~~a  148 (175)
T d1llua1          91 PWLYTACGCCEHCLTGWETLCESQQN---TGYSVNG-------------------GYAEYVLADPNYVGILPKNVKATIH  148 (175)
T ss_dssp             CSEEECCSSSHHHHTTCGGGCTTCEE---BTTTBCC-------------------SSBSEEEECTTTSEECCTTCCCCEE
T ss_pred             ccccccCCccccccCCcccccccccc---ccccccc-------------------ccceEEEechHHEEECCCCCChhHH
Confidence            65 45799999999999999988775   6777776                   8999999999999999999999988


Q ss_pred             hccccchhhhHHHHHHHcCCCCCCeEEEE
Q 017457          162 CLLSCGVSTGVGAAWKVAGVEVGSTVAIF  190 (371)
Q Consensus       162 a~~~~~~~ta~~~l~~~~~~~~g~~VLI~  190 (371)
                      +++.+++.|+++.+ + ....+|++|||+
T Consensus       149 ~~~~~~~~t~~~~~-~-~g~~~G~~VLVl  175 (175)
T d1llua1         149 PGKLDDINQILDQM-R-AGQIEGRIVLEM  175 (175)
T ss_dssp             EECGGGHHHHHHHH-H-TTCCSSEEEEEC
T ss_pred             HHHHhHHHHHHHHH-H-hCCCCCCEEEeC
Confidence            88888999988854 3 445579999984

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.97  E-value=6.3e-31  Score=224.19  Aligned_cols=183  Identities=39%  Similarity=0.596  Sum_probs=151.1

Q ss_pred             CccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEe
Q 017457            2 QRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVL   81 (371)
Q Consensus         2 ~~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~   81 (371)
                      +++++++|++++++.|+|+++||||||.+++||++|++.++|.++.   .+|.++|||++|+|+++|++++++++||+|+
T Consensus        14 l~~~~~~l~i~ev~~P~p~~~eVlVkV~a~giC~sDl~~~~G~~~~---~~P~i~GHE~~G~Vv~vG~~v~~~~vGdrV~   90 (198)
T d2jhfa1          14 LWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT---PLPVIAGHEAAGIVESIGEGVTTVRPGDKVI   90 (198)
T ss_dssp             BCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCC---CSSBCCCCSEEEEEEEECTTCCSCCTTCEEE
T ss_pred             EecCCCCCEEEEEECCCCCCCEEEEEEEEEecccccceeecCCccc---ccceecccceeEEEEecCccccCcCCCCEEE
Confidence            4578888999999999999999999999999999999999998664   5899999999999999999999999999999


Q ss_pred             eccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchh
Q 017457           82 PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA  161 (371)
Q Consensus        82 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~a  161 (371)
                      +.+...|+.|.+|..+.++.|.........+...++... -..+|..++++.+.|+|+||+++++.+++++|+.++++.+
T Consensus        91 v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~-~~~~g~~~~~~~~~G~fAEy~~v~~~~~~~~p~~~~~e~l  169 (198)
T d2jhfa1          91 PLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSR-FTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAFALDPL  169 (198)
T ss_dssp             ECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCS-EEETTEEEBCSTTTCCSBSEEEEEGGGEEECCTTSCCGGG
T ss_pred             EeeeecccccccccCCccceeccccccccCccccCcccc-ccccCceeccCCCCCcccCeEEeCHHHeEECCCCCCHHHH
Confidence            999999999999999999999988765333433333211 2345666777888899999999999999999999998776


Q ss_pred             hccccchhhhHHHHHHHcCCCCCCeEEEEc
Q 017457          162 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFG  191 (371)
Q Consensus       162 a~~~~~~~ta~~~l~~~~~~~~g~~VLI~G  191 (371)
                      +...+++.+...+   ...+++|++|.|+.
T Consensus       170 ~~~~~~~~~v~~g---~~~l~~G~~VaVi~  196 (198)
T d2jhfa1         170 ITHVLPFEKINEG---FDLLRSGESIRTIL  196 (198)
T ss_dssp             EEEEEEGGGHHHH---HHHHHTTCCSEEEE
T ss_pred             HHHHHHHHhhhhC---CceeeCCCEEEEEE
Confidence            6655454443321   23478899998863

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.97  E-value=5.8e-31  Score=220.41  Aligned_cols=165  Identities=26%  Similarity=0.365  Sum_probs=134.6

Q ss_pred             ccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCC-----CcCCC
Q 017457            3 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE-----EVKER   77 (371)
Q Consensus         3 ~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~-----~~~~G   77 (371)
                      .+++++|++++++.|+|+++||||||.+++||++|+++++|.++..  ++|+++|||++|+|+++|+.|+     .+++|
T Consensus        11 ~~~~~pl~i~ev~~P~~~~~evlVkv~a~gIC~sD~~~~~G~~~~~--~~P~vlGHE~~G~V~~vG~~v~~~~~~~~~~G   88 (184)
T d1vj0a1          11 EKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRV--PLPIILGHEGAGRVVEVNGEKRDLNGELLKPG   88 (184)
T ss_dssp             CSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTC--CSSBCCCCEEEEEEEEESSCCBCTTSCBCCTT
T ss_pred             ecCCCCcEEEEeeCCCCCCCEEEEEEEEECCCCCchhheeccCCcc--ccccccceeeeeeeeEEeccccccccccccce
Confidence            4556679999999999999999999999999999999999987665  7999999999999999999986     46899


Q ss_pred             CEEeeccCCCCCCCccccCCCCC-CCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeee-cceeEECCCC
Q 017457           78 DLVLPIFHRDCGECRDCKSSKSN-TCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVD-ITHVVKITPH  155 (371)
Q Consensus        78 d~V~~~~~~~~~~c~~~~~~~~~-~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~-~~~~~~~P~~  155 (371)
                      |+|++.+...|++|.+|+.+++. .|.....   .|+...-           .....-.|+|+||+.++ +.+++++|++
T Consensus        89 d~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~---~G~~~~~-----------~~~~~~~Gg~ae~~~v~~~~~v~~ip~~  154 (184)
T d1vj0a1          89 DLIVWNRGITCGECYWCKVSKEPYLCPNRKV---YGINRGC-----------SEYPHLRGCYSSHIVLDPETDVLKVSEK  154 (184)
T ss_dssp             CEEEECSEECCSSSHHHHTSCCGGGCTTCEE---TTTTCCS-----------SSTTCCCSSSBSEEEECTTCCEEEECTT
T ss_pred             eeeEeccccccccChhHhCccccccCCCcee---eccCCCC-----------CCCCCcceeCcCcEEechhHcEEECCCC
Confidence            99999999999999999999864 5766553   4442210           00000125999999996 5799999999


Q ss_pred             CCcchhhccccchhhhHHHHHHHcCCCCCCeEEEE
Q 017457          156 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIF  190 (371)
Q Consensus       156 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~  190 (371)
                      +++++      ++.+|+++ .+.+++++|++|||+
T Consensus       155 l~~~~------pl~~A~~a-~~~~~~~~G~~VlI~  182 (184)
T d1vj0a1         155 ITHRL------PLKEANKA-LELMESREALKVILY  182 (184)
T ss_dssp             CCEEE------EGGGHHHH-HHHHHHTSCSCEEEE
T ss_pred             CCHHH------HHHHHHHH-HHHhCCCcCCEEEEe
Confidence            99763      34567775 477889999999997

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.97  E-value=1.5e-32  Score=229.03  Aligned_cols=165  Identities=19%  Similarity=0.179  Sum_probs=134.0

Q ss_pred             ccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEee
Q 017457            3 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP   82 (371)
Q Consensus         3 ~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~   82 (371)
                      +.+.++++++|+|.|+|+++|||||+++++||++|++.+.+.....  .+|+++|||++|+|+++|+++++|++||||++
T Consensus         6 ~~~~~~l~i~e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~~~~~~--~~P~i~GhE~~G~V~~vG~~v~~~~vGdrV~v   83 (177)
T d1jqba1           6 MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGD--RKNMILGHEAVGEVVEVGSEVKDFKPGDRVIV   83 (177)
T ss_dssp             EEETTEEEEEECCCCCCCTTCEEEEEEEECCCHHHHHHHHHCTTCC--CSSEECCCCEEEEEEEECTTCCSCCTTCEEEE
T ss_pred             EEeCCCeEEEEeeCCCCCCCEEEEEEEEEecCCCcccccccCCCCC--CCCccCcceeeEEeeecccccceecCCCcEEE
Confidence            3344559999999999999999999999999999998887655444  78999999999999999999999999999999


Q ss_pred             ccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeec--ceeEECCCCCCcch
Q 017457           83 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI--THVVKITPHIPLGI  160 (371)
Q Consensus        83 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~--~~~~~~P~~l~~~~  160 (371)
                      .+...|++|++|+.+.++.|.....+..+|...+|                   +|+||+.+|.  .+++++|+++++++
T Consensus        84 ~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~~~G-------------------~~aEy~~vp~a~~~l~~iP~~~~~~~  144 (177)
T d1jqba1          84 PCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDG-------------------VFGEYFHVNDADMNLAILPKDVDLSK  144 (177)
T ss_dssp             CSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTTBCC-------------------SSBSSEEESSHHHHCEECCTTSCGGG
T ss_pred             eeeeccccccchhhhhhcccccccccccccCCCCh-------------------hcCeeEEEEhhhCeEEECCCCcchHH
Confidence            99999999999999999999877643334444444                   9999999986  46999999999888


Q ss_pred             hhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHH
Q 017457          161 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAV  199 (371)
Q Consensus       161 aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~a  199 (371)
                      ++....   +++..+        ++.+||+|+|++|+.+
T Consensus       145 ~~~~~~---~~~~~~--------~~~vlv~g~gp~gl~a  172 (177)
T d1jqba1         145 LVTHVY---HGFDHI--------EEALLLMKDKPKDLIK  172 (177)
T ss_dssp             GEEEEE---ESGGGH--------HHHHHHHHHCCTTCSE
T ss_pred             HHHHHH---HHHHHh--------cCceEEECCCHHHhhe
Confidence            765432   233322        2347777877777654

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=9.3e-31  Score=221.01  Aligned_cols=161  Identities=23%  Similarity=0.299  Sum_probs=136.6

Q ss_pred             CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCC-CCcCCCCEEeeccC-
Q 017457            8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYV-EEVKERDLVLPIFH-   85 (371)
Q Consensus         8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v-~~~~~Gd~V~~~~~-   85 (371)
                      .+++.+.+.++++++||||||+|++||++|++.+.|.++..  .+|+++|||++|+|+++|+++ +.+++||||++.+. 
T Consensus        20 ~~~~~~~~p~p~~~~eVlVkv~a~giC~sDl~~~~g~~~~~--~~P~i~GHE~~G~Vv~vG~~v~~~~k~GdrV~~~~~~   97 (192)
T d1piwa1          20 NPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNM--KMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQV   97 (192)
T ss_dssp             SCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCC--CSSEECCCCEEEEEEEECTTCCSSCCTTCEEEECSEE
T ss_pred             cceEeeccCCCCCCCeEEEEEeeeCCCcchHHHHcCCCCCC--CCCcCcccccccchhhcccccccccCCCCeeeEeeec
Confidence            46777777777899999999999999999999999987665  789999999999999999988 66999999977765 


Q ss_pred             CCCCCCccccCCCCCCCCCCCCCC----CCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchh
Q 017457           86 RDCGECRDCKSSKSNTCSKFGRGY----RPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA  161 (371)
Q Consensus        86 ~~~~~c~~~~~~~~~~~~~~~~~~----~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~a  161 (371)
                      ..|+.|.+|+.+.++.|.......    ..|+..+                   |+|+||+++++.+++++|+++++++|
T Consensus        98 ~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~-------------------Ggfaey~~v~~~~~~~iP~~l~~e~A  158 (192)
T d1piwa1          98 FSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQ-------------------GGYANYVRVHEHFVVPIPENIWVETL  158 (192)
T ss_dssp             ECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCC-------------------CSSBSEEEEEGGGEEECCTTCCEEEE
T ss_pred             cCCCCchhhhcCCcccccccccccccccccccccc-------------------cceeeEEEeehHHeEECCCCCCHHHH
Confidence            579999999999999998765421    1133333                   49999999999999999999999887


Q ss_pred             hccccchhhhHHHHHHHcCCCCCCeEEEE
Q 017457          162 CLLSCGVSTGVGAAWKVAGVEVGSTVAIF  190 (371)
Q Consensus       162 a~~~~~~~ta~~~l~~~~~~~~g~~VLI~  190 (371)
                      +.+.+.+.|||+++ +.+++++|++|||.
T Consensus       159 al~~~~~~ta~~~l-~~~~vk~g~~Vvv~  186 (192)
T d1piwa1         159 PVGEAGVHEAFERM-EKGDVRYRFTLVGY  186 (192)
T ss_dssp             ESSHHHHHHHHHHH-HHTCCSSEEEEECC
T ss_pred             HHHHHHHHHHHHHH-HHhCCCCCCEEEEE
Confidence            76665577999865 67999999999985

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.97  E-value=2.5e-33  Score=238.60  Aligned_cols=183  Identities=21%  Similarity=0.275  Sum_probs=145.1

Q ss_pred             ccCCCCcEEEEEecCCC-------CCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcC
Q 017457            3 RIPGKPLVIEEIEVEPP-------KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK   75 (371)
Q Consensus         3 ~~~~~~l~~~~~~~~~~-------~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~   75 (371)
                      +...++++++|++.|++       .++||+|||.+++||++|+++++|.++.   .+|+++|||++|+|+++|++|++|+
T Consensus         7 ~~~~~~le~~e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~~~---~~P~v~GHE~~G~Vv~vG~~V~~~~   83 (201)
T d1kola1           7 YLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTA---QVGLVLGHEITGEVIEKGRDVENLQ   83 (201)
T ss_dssp             EEETTEEEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSCC---CTTCBCCCCEEEEEEEECTTCCSCC
T ss_pred             EeCCCceEEEEecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCccc---ccceeccceeeeeeecccccccccc
Confidence            33444599999999865       4699999999999999999999988653   5899999999999999999999999


Q ss_pred             CCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCC---CCCCCCCccccccCCceeecccCcccccceeeeec--ceeE
Q 017457           76 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRP---NMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI--THVV  150 (371)
Q Consensus        76 ~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~---g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~--~~~~  150 (371)
                      +||||++.+..+|+.|++|+.+.++.|.........   |+...+               .-.|+|+||+++|.  .+++
T Consensus        84 vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~~~---------------~~~Gg~aeyv~vp~~~~~l~  148 (201)
T d1kola1          84 IGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMG---------------DWTGGQAEYVLVPYADFNLL  148 (201)
T ss_dssp             TTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSC---------------CBCCCSBSEEEESSHHHHCE
T ss_pred             ccceeEEeeeeeccCChhhhCCCcccccccccccccccccccCCC---------------ccccccccEEEeehHHCeEE
Confidence            999999999999999999999999998765432111   111100               11259999999975  4799


Q ss_pred             ECCCCCCcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCC
Q 017457          151 KITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA  208 (371)
Q Consensus       151 ~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~  208 (371)
                      ++|++.+..+++.+...+.++++++ .....+.+    ++|+|++|++++|+||++|+
T Consensus       149 ~iPd~~~~~~~~~~~~~~~~~~~a~-~~~~~~~g----~~g~G~vG~~~i~~ak~~GA  201 (201)
T d1kola1         149 KLPDRDKAMEKINIAEVVGVQVISL-DDAPRGYG----EFDAGVPKKFVIDPHKTFSA  201 (201)
T ss_dssp             ECSCHHHHHHTCCHHHHHTEEEECG-GGHHHHHH----HHHHTCSCEEEECTTCSSCC
T ss_pred             ECCCCCChHHHHHHHHHHHHHHHHH-HhCCCCCe----EEeeCHHHHHHHHHHHHcCC
Confidence            9999877777777766777887764 33334433    35889999999999999986

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.96  E-value=3.4e-30  Score=214.79  Aligned_cols=163  Identities=26%  Similarity=0.389  Sum_probs=138.0

Q ss_pred             ccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEee
Q 017457            3 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP   82 (371)
Q Consensus         3 ~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~   82 (371)
                      .+.+++|+++++|.|+|++|||||||++++||++|++.+++...... .+|.++|||++|+|+++|+.++++++||+|++
T Consensus         7 ~~~g~pl~i~~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~~~~~-~~p~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~   85 (171)
T d1rjwa1           7 EQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKP-KLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGI   85 (171)
T ss_dssp             SSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCC-CSSBCCCSCEEEEEEEECTTCCSCCTTCEEEE
T ss_pred             ecCCCCcEEEEeECCCCCCCeEEEEEEEeeccccceeeeeccccccc-ccccccCCEEEEEEEEecccccCceeeeEEee
Confidence            45577899999999999999999999999999999998887654332 78999999999999999999999999999977


Q ss_pred             cc-CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchh
Q 017457           83 IF-HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA  161 (371)
Q Consensus        83 ~~-~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~a  161 (371)
                      .+ ...|+.|..|..+.+++|.....   .|+..+|                   +|+||+++++++++++|++++++.|
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~iP~~~~~e~A  143 (171)
T d1rjwa1          86 PWLYSACGHCDYCLSGQETLCEHQKN---AGYSVDG-------------------GYAEYCRAAADYVVKIPDNTIIEVQ  143 (171)
T ss_dssp             CSEEECCSCSHHHHTTCGGGCTTCEE---BTTTBCC-------------------SSBSEEEEEGGGCEECCTTCCEEEE
T ss_pred             ccccccccccccccCCCccccccccc---cceeccC-------------------ccccceEecHHHEEECCCCCCHHHH
Confidence            55 45699999999999999988775   6666666                   9999999999999999999998655


Q ss_pred             hccccchhhhHHHHHHHcCCCCCCeEEEEcC
Q 017457          162 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL  192 (371)
Q Consensus       162 a~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~  192 (371)
                      + +. ...++++.+. .+.+ +|++|||+|.
T Consensus       144 ~-l~-~~~~~~~~~~-~~~~-~G~tVlViG~  170 (171)
T d1rjwa1         144 P-LE-KINEVFDRML-KGQI-NGRVVLTLED  170 (171)
T ss_dssp             E-GG-GHHHHHHHHH-TTCC-SSEEEEECCC
T ss_pred             H-HH-HHHHHHHHHH-hcCC-CCCEEEEeCC
Confidence            4 44 4566776543 3444 5999999984

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.96  E-value=4.4e-30  Score=215.22  Aligned_cols=162  Identities=27%  Similarity=0.408  Sum_probs=135.4

Q ss_pred             ccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCC------CCCCCCccccccccEEEEEeCCCCCCcCC
Q 017457            3 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL------PKLPLPVIFGHEAVGVVESVGEYVEEVKE   76 (371)
Q Consensus         3 ~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~------~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~   76 (371)
                      .+++++|++++++.|+|++|||||||.+++||++|+++++|.++.      ....+|+++|||++|+|+++|+.+++|++
T Consensus         7 ~~~G~pl~i~dv~~P~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~~g~~v~~~~~   86 (177)
T d1jvba1           7 VEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSK   86 (177)
T ss_dssp             CSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTTCCSCCT
T ss_pred             EeCCCCCEEEEeeCCCCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEEEeeeccCcccccc
Confidence            456778999999999999999999999999999999999987532      22378999999999999999999999999


Q ss_pred             CCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecce-eEECCCC
Q 017457           77 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITH-VVKITPH  155 (371)
Q Consensus        77 Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~-~~~~P~~  155 (371)
                      ||+|++.+...|+.|.+|..++++.|.....   .|+..+|                   +|+||+++++.. ++++|+ 
T Consensus        87 GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~---~g~~~~G-------------------~~aey~~vp~~~~~~~~~~-  143 (177)
T d1jvba1          87 GDLVAVNPWQGEGNCYYCRIGEEHLCDSPRW---LGINFDG-------------------AYAEYVIVPHYKYMYKLRR-  143 (177)
T ss_dssp             TCEEEECCEECCSSSHHHHTTCGGGCSSCEE---BTTTBCC-------------------SSBSEEEESCGGGEEECSS-
T ss_pred             CceEeeeeccccccccccccccccccCCcce---eeecccc-------------------ccccEEEEEhHHeEEECCC-
Confidence            9999999999999999999999999998765   6776666                   999999997655 555555 


Q ss_pred             CCcchhhcc-ccchhhhHHHHHHHcCCCCCCeEEE
Q 017457          156 IPLGIACLL-SCGVSTGVGAAWKVAGVEVGSTVAI  189 (371)
Q Consensus       156 l~~~~aa~~-~~~~~ta~~~l~~~~~~~~g~~VLI  189 (371)
                      +++.+++++ ..++.+|++++ ...++ .|++|||
T Consensus       144 ~~~~~~a~~~~~~~~~a~~~~-~~~~~-~G~~VlI  176 (177)
T d1jvba1         144 VKPMITKTMKLEEANEAIDNL-ENFKA-IGRQVLI  176 (177)
T ss_dssp             SCCCCEEEEEGGGHHHHHHHH-HTTCC-CSEEEEE
T ss_pred             CChHHHHHHHHHHHHHHHHHH-Hhhcc-cCCceEC
Confidence            444555544 45888888865 45555 5899987

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.96  E-value=1.8e-28  Score=204.67  Aligned_cols=173  Identities=30%  Similarity=0.521  Sum_probs=157.5

Q ss_pred             CCcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcC
Q 017457          156 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP  235 (371)
Q Consensus       156 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~  235 (371)
                      ++++.|+.++|++.|||+++.+..++++|++|||+|+|++|++++|+|+++|+++|++++++++|++.++++|+++++|+
T Consensus         1 vP~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~   80 (174)
T d1f8fa2           1 VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINS   80 (174)
T ss_dssp             SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEET
T ss_pred             CCHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCCCHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEeC
Confidence            35678999999999999999899999999999999999999999999999999888889999999999999999999999


Q ss_pred             CCCCCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccC
Q 017457          236 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGG  314 (371)
Q Consensus       236 ~~~~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~  314 (371)
                      ++   +++.+.+++++++++|+||||+|++..++.+++.++++ |+++.+|........+++...++. ++++.|+.+++
T Consensus        81 ~~---~~~~~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~-G~i~~~G~~~~~~~~~~~~~~~~~k~~~i~Gs~~g~  156 (174)
T d1f8fa2          81 KT---QDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGS  156 (174)
T ss_dssp             TT---SCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEE-EEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGGG
T ss_pred             CC---cCHHHHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCc-eEEEEEeecCCCcccccCHHHHHHCCCEEEEEEecC
Confidence            88   88999999999989999999999988789999999998 999999975555567788877766 89999998888


Q ss_pred             CCchhhHHHHHHHHHcCC
Q 017457          315 LKPRSDIATLAQKYLDKE  332 (371)
Q Consensus       315 ~~~~~~~~~~~~~~~~g~  332 (371)
                      +..+++++++++++++|+
T Consensus       157 ~~~~~~~~~~~~l~~~Gk  174 (174)
T d1f8fa2         157 GSPKKFIPELVRLYQQGK  174 (174)
T ss_dssp             SCHHHHHHHHHHHHHTTS
T ss_pred             CChHHHHHHHHHHHHcCC
Confidence            777788999999999985

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=1.7e-29  Score=210.86  Aligned_cols=155  Identities=24%  Similarity=0.321  Sum_probs=124.3

Q ss_pred             CccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEe
Q 017457            2 QRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVL   81 (371)
Q Consensus         2 ~~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~   81 (371)
                      .+.++++|+++|++.|+|+++||||||.+++||++|++.+.|.+...  .+|+++|||++|+|+++|++|+++++||+|.
T Consensus         6 ~~~~~~pl~i~ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~~~~~--~~P~i~GhE~~G~V~~vG~~V~~~~vGdrV~   83 (179)
T d1uufa1           6 AYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGT--VYPCVPGHEIVGRVVAVGDQVEKYAPGDLVG   83 (179)
T ss_dssp             BSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCC--CSSBCCCCCEEEEEEEECTTCCSCCTTCEEE
T ss_pred             EccCCCCCEEEEecCCCCCCCEEEEEEEEECCCCCcceeeeeeeccc--cccccccccccccchhhccccccCCCCCEEE
Confidence            46788899999999999999999999999999999999999987666  7899999999999999999999999999997


Q ss_pred             ecc-CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcch
Q 017457           82 PIF-HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI  160 (371)
Q Consensus        82 ~~~-~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~  160 (371)
                      +.+ ...|++|++|+.+++++|....... .+.....        +     ....|+|+||+.+++++++++|+......
T Consensus        84 v~~~~~~cg~C~~C~~g~~~~C~~~~~~~-~~~~~~~--------~-----~~~~GgfaEy~~v~~~~~~~ip~~~~~~~  149 (179)
T d1uufa1          84 VGCIVDSCKHCEECEDGLENYCDHMTGTY-NSPTPDE--------P-----GHTLGGYSQQIVVHERYVLRIRVADIEMI  149 (179)
T ss_dssp             ECSEEECCSSSHHHHTTCGGGCTTCEETT-TSBCSST--------T-----SBCCCSSBSEEEEEGGGCEECCCCCEEEE
T ss_pred             EcccccccCccccccCcccccCCCccccc-cccCCCC--------C-----cccccccceEEEechHHEEECCCCCcChh
Confidence            766 4689999999999999998765321 1111110        0     01125999999999999999996654332


Q ss_pred             hhccccchhhhHHHH
Q 017457          161 ACLLSCGVSTGVGAA  175 (371)
Q Consensus       161 aa~~~~~~~ta~~~l  175 (371)
                      .+.   ++.+|++++
T Consensus       150 ~a~---~l~~a~~a~  161 (179)
T d1uufa1         150 RAD---QINEAYERM  161 (179)
T ss_dssp             CGG---GHHHHHHHH
T ss_pred             Hhc---hhHHHHHHH
Confidence            222   455677754

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.95  E-value=5.2e-27  Score=195.48  Aligned_cols=174  Identities=40%  Similarity=0.685  Sum_probs=148.4

Q ss_pred             CcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCC
Q 017457          157 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA  236 (371)
Q Consensus       157 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~  236 (371)
                      +|.+||.+.|++.|||+++.+.+++++|++|||+|+|++|++++|+||++|+++|++++++++|++.++++|+++++|+.
T Consensus         1 ~P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~   80 (174)
T d1p0fa2           1 APLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPK   80 (174)
T ss_dssp             CCGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCC
Confidence            46789999999999999988889999999999999999999999999999998999999999999999999999999876


Q ss_pred             CCCCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCC
Q 017457          237 TCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLK  316 (371)
Q Consensus       237 ~~~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  316 (371)
                      + .+....+..+..+++++|++||++|....++.++..+.++.|+++.+|.......++++...+++++++.|+.++++.
T Consensus        81 ~-~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~  159 (174)
T d1p0fa2          81 D-YDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFK  159 (174)
T ss_dssp             G-CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTCEEEECSGGGCC
T ss_pred             C-chhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCccccccCHHHHhCCCEEEEEEeCCCC
Confidence            5 112244444555555999999999999888889988876338999999866666777777767778899999887765


Q ss_pred             chhhHHHHHHHHHcCC
Q 017457          317 PRSDIATLAQKYLDKE  332 (371)
Q Consensus       317 ~~~~~~~~~~~~~~g~  332 (371)
                       .+++.++++++++||
T Consensus       160 -~~d~~~lidl~~~gK  174 (174)
T d1p0fa2         160 -GEEVSRLVDDYMKKK  174 (174)
T ss_dssp             -GGGHHHHHHHHHTTS
T ss_pred             -HHHHHHHHHHHHcCC
Confidence             458999999999985

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.95  E-value=8.6e-27  Score=193.84  Aligned_cols=172  Identities=37%  Similarity=0.715  Sum_probs=148.4

Q ss_pred             CcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCC
Q 017457          157 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA  236 (371)
Q Consensus       157 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~  236 (371)
                      ++++||.+.|++.|+|+++.+.+++++|++|+|+|+|++|++++|+|+++|+++|++++.+++|++.++++|+++++++.
T Consensus         2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~   81 (174)
T d1e3ia2           2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPR   81 (174)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCCc
Confidence            56789999999999999988899999999999999999999999999999998899999999999999999999999865


Q ss_pred             CCCCccHHHHHHHhh-CCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCC
Q 017457          237 TCGDKTVSQVIKEMT-DGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGL  315 (371)
Q Consensus       237 ~~~~~~~~~~i~~~~-~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  315 (371)
                      + . ++..+.+.+.+ ++|+|+||||+|.+.+++.++++++++.|+++.+|...  ...+++...++.++++.|+..+++
T Consensus        82 ~-~-~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~--~~~~i~~~~~~~~k~i~Gs~~Gs~  157 (174)
T d1e3ia2          82 E-L-DKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKV--DEMTIPTVDVILGRSINGTFFGGW  157 (174)
T ss_dssp             G-C-SSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSS--SEEEEEHHHHHTTCEEEECSGGGC
T ss_pred             c-c-hhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCC--CccccchHHHhccCEEEEEEeeCC
Confidence            4 1 23444444444 44999999999999889999999998338999999743  456777777777889999998888


Q ss_pred             CchhhHHHHHHHHHcCC
Q 017457          316 KPRSDIATLAQKYLDKE  332 (371)
Q Consensus       316 ~~~~~~~~~~~~~~~g~  332 (371)
                      .+.+++.++++++++||
T Consensus       158 ~~~~d~p~li~l~~~GK  174 (174)
T d1e3ia2         158 KSVDSVPNLVSDYKNKK  174 (174)
T ss_dssp             CHHHHHHHHHHHHHTTS
T ss_pred             ChHHHHHHHHHHHHCcC
Confidence            88889999999999885

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.2e-27  Score=194.31  Aligned_cols=136  Identities=18%  Similarity=0.238  Sum_probs=121.4

Q ss_pred             CCCcEEE-EEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeecc
Q 017457            6 GKPLVIE-EIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIF   84 (371)
Q Consensus         6 ~~~l~~~-~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~   84 (371)
                      .+.++++ ++|.|+|++|||||||.+++||++|.+.++|.+.... .+|.++|||++|+|+++|+++++|++||+|....
T Consensus        14 p~~l~~~~~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~-~~p~i~G~e~~G~V~~vG~~v~~~~vGdrV~~~~   92 (150)
T d1yb5a1          14 PEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKP-LLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSS   92 (150)
T ss_dssp             GGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCC-CSSBCCCSCEEEEEEEECTTCTTCCTTCEEEESC
T ss_pred             cceEEEEeecCCCCCCCCeEEEEEEEecCcccchhhhcCCcCccc-cccccCccceeeeeEeecceeeccccCccccccc
Confidence            3457775 6899999999999999999999999999999876543 7899999999999999999999999999996543


Q ss_pred             CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcc
Q 017457           85 HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLL  164 (371)
Q Consensus        85 ~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~  164 (371)
                      .                             .+                   |+|+||+.+++++++++|+++++++||++
T Consensus        93 ~-----------------------------~~-------------------G~~ae~~~v~~~~~~~iP~~ls~~~Aa~~  124 (150)
T d1yb5a1          93 T-----------------------------IS-------------------GGYAEYALAADHTVYKLPEKLKPVIGSQY  124 (150)
T ss_dssp             C-----------------------------SS-------------------CSSBSEEEEEGGGEEECCTTCCCCEEEEE
T ss_pred             c-----------------------------cc-------------------ccccccccccccccccccCCCCHHHHHHh
Confidence            2                             12                   49999999999999999999999999999


Q ss_pred             ccchhhhHHHHHHHcCCCCCCeEEEE
Q 017457          165 SCGVSTGVGAAWKVAGVEVGSTVAIF  190 (371)
Q Consensus       165 ~~~~~ta~~~l~~~~~~~~g~~VLI~  190 (371)
                      ++++.|+++++...++...|+++||+
T Consensus       125 ~~~~~ta~~~~~~~g~~~~G~~vliL  150 (150)
T d1yb5a1         125 PLEKVAEAHENIIHGSGATGKMILLL  150 (150)
T ss_dssp             EGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             hhhhhhehhhheEEcCcccCCEEEEC
Confidence            99999999998888999999999984

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.8e-27  Score=197.55  Aligned_cols=166  Identities=20%  Similarity=0.277  Sum_probs=147.1

Q ss_pred             CCcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEc
Q 017457          156 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN  234 (371)
Q Consensus       156 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~  234 (371)
                      ||+++||+++++++|||+++.+..++++|++|||+|+ |++|++++|+|+++|+ +|+++++++++++.++++|+++++|
T Consensus         1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~vi~   79 (174)
T d1yb5a2           1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFN   79 (174)
T ss_dssp             SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEE
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCc-ccccccccccccccccccCcccccc
Confidence            6899999999999999999888889999999999997 9999999999999999 8999999999999999999999999


Q ss_pred             CCCCCCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeec
Q 017457          235 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYF  312 (371)
Q Consensus       235 ~~~~~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~  312 (371)
                      +++   +++.+.+++.+++ ++|++||++|+.. ++.++++++++ |+++.+|..   ...+++...++. ++++.|+.+
T Consensus        80 ~~~---~~~~~~i~~~t~~~g~d~v~d~~g~~~-~~~~~~~l~~~-G~iv~~G~~---~~~~~~~~~~~~k~~~i~g~~~  151 (174)
T d1yb5a2          80 HRE---VNYIDKIKKYVGEKGIDIIIEMLANVN-LSKDLSLLSHG-GRVIVVGSR---GTIEINPRDTMAKESSIIGVTL  151 (174)
T ss_dssp             TTS---TTHHHHHHHHHCTTCEEEEEESCHHHH-HHHHHHHEEEE-EEEEECCCC---SCEEECTHHHHTTTCEEEECCG
T ss_pred             ccc---ccHHHHhhhhhccCCceEEeecccHHH-HHHHHhccCCC-CEEEEEecC---CCCCCCHHHHHHCCCEEEEEEe
Confidence            988   8999999999988 9999999999765 99999999998 999999863   235666666666 899999976


Q ss_pred             cCCCchhhHHHHHHHHHcC
Q 017457          313 GGLKPRSDIATLAQKYLDK  331 (371)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~g  331 (371)
                      .... .+++++++++++++
T Consensus       152 ~~~~-~~~~~~~~~~l~~g  169 (174)
T d1yb5a2         152 FSST-KEEFQQYAAALQAG  169 (174)
T ss_dssp             GGCC-HHHHHHHHHHHHHH
T ss_pred             cCCC-HHHHHHHHHHHHHH
Confidence            5543 56788888887765

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.94  E-value=5.3e-26  Score=190.10  Aligned_cols=174  Identities=45%  Similarity=0.758  Sum_probs=145.5

Q ss_pred             CcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCC
Q 017457          157 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA  236 (371)
Q Consensus       157 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~  236 (371)
                      ++++||.++|++.|||+++.+.+++++|++|||+|+|++|++++|+|+++|+++|++++++++|++.++++|+++++++.
T Consensus         2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~   81 (176)
T d2fzwa2           2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecchhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCC
Confidence            46789999999999999988889999999999999999999999999999988999999999999999999999999875


Q ss_pred             CCCCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCC-CCceecCHHHHhcCceEEEeeccCC
Q 017457          237 TCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH-GSPISLNSIEILKGRSVCGTYFGGL  315 (371)
Q Consensus       237 ~~~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~  315 (371)
                      + ......+.++..+++++|+|||++|+...++.+...++++ |.++.++.... ......+...++.++++.|+.++++
T Consensus        82 ~-~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g-~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~  159 (176)
T d2fzwa2          82 D-FSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG-WGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGW  159 (176)
T ss_dssp             G-CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTT-TCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGC
T ss_pred             c-hhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCC-ceeEEEEeeccccccccccHHHHHCCCEEEEEeeeCC
Confidence            4 1234555555556669999999999988788888888887 78777654333 3344445555666899999988888


Q ss_pred             CchhhHHHHHHHHHcCC
Q 017457          316 KPRSDIATLAQKYLDKE  332 (371)
Q Consensus       316 ~~~~~~~~~~~~~~~g~  332 (371)
                      ...+++.++++++++||
T Consensus       160 ~~~~d~~~li~l~~~GK  176 (176)
T d2fzwa2         160 KSVESVPKLVSEYMSKK  176 (176)
T ss_dssp             CHHHHHHHHHHHHHTTS
T ss_pred             cHHHHHHHHHHHHHcCC
Confidence            87889999999999985

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.94  E-value=1e-26  Score=195.75  Aligned_cols=173  Identities=20%  Similarity=0.204  Sum_probs=147.7

Q ss_pred             chhhccccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCC
Q 017457          159 GIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPAT  237 (371)
Q Consensus       159 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~  237 (371)
                      +|||+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.++++|+++++++++
T Consensus         1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~-~vi~~~~~~~~~~~l~~~Ga~~vi~~~~   79 (183)
T d1pqwa_           1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSRLGVEYVGDSRS   79 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHTTCCSEEEETTC
T ss_pred             CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccc-cceeeecccccccccccccccccccCCc
Confidence            4799999999999999988889999999999987 9999999999999999 9999999999999999999999999888


Q ss_pred             CCCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCC
Q 017457          238 CGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLK  316 (371)
Q Consensus       238 ~~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  316 (371)
                         +++.+.+++++++ |+|++||++|+.. ++.++++++++ |+++.+|.........+....+.++.++.++......
T Consensus        80 ---~~~~~~v~~~t~~~g~d~v~d~~g~~~-~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (183)
T d1pqwa_          80 ---VDFADEILELTDGYGVDVVLNSLAGEA-IQRGVQILAPG-GRFIELGKKDVYADASLGLAALAKSASFSVVDLDLNL  154 (183)
T ss_dssp             ---STHHHHHHHHTTTCCEEEEEECCCTHH-HHHHHHTEEEE-EEEEECSCGGGTTTCEEEGGGGTTTCEEEECCHHHHH
T ss_pred             ---cCHHHHHHHHhCCCCEEEEEecccchH-HHHHHHHhcCC-CEEEEEccCCCCCCcccchHHHhCCcEEEEEEcccee
Confidence               8999999999988 9999999999876 99999999998 9999998654434444545555568888887533211


Q ss_pred             ------chhhHHHHHHHHHcCCCCCCC
Q 017457          317 ------PRSDIATLAQKYLDKELNLGE  337 (371)
Q Consensus       317 ------~~~~~~~~~~~~~~g~~~~~~  337 (371)
                            .++.++++++++++|++++.|
T Consensus       155 ~~~~~~~~~~~~~v~~~i~~G~i~p~P  181 (183)
T d1pqwa_         155 KLQPARYRQLLQHILQHVADGKLEVLP  181 (183)
T ss_dssp             HHCHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred             ccCHHHHHHHHHHHHHHHHCCCCceeC
Confidence                  135678899999999887643

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.94  E-value=3.4e-26  Score=190.42  Aligned_cols=170  Identities=26%  Similarity=0.415  Sum_probs=146.6

Q ss_pred             CCcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcC
Q 017457          156 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP  235 (371)
Q Consensus       156 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~  235 (371)
                      +|+++|+.+++++.|||+++ +.+++++|++|+|+|+|++|++++|+||.+|+++|++++++++|++.++++|+++++++
T Consensus         1 ip~e~A~~l~~~~~ta~~a~-~~a~~~~g~~VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~~   79 (174)
T d1jqba2           1 MPLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNY   79 (174)
T ss_dssp             SCHHHHHTTTTHHHHHHHHH-HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEECG
T ss_pred             CCHHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEEcCCcchhhhhhhhhcccccccccccchhhhHHHHHhhCccccccc
Confidence            57889999999999999975 67999999999999999999999999999999889999999999999999999999999


Q ss_pred             CCCCCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHH---HHhcCceEEEee
Q 017457          236 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI---EILKGRSVCGTY  311 (371)
Q Consensus       236 ~~~~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~---~~~~~~~~~g~~  311 (371)
                      ++   +++.+.+++++++ |+|+||||+|++..++.++++++++ |+++.+|.........++..   .++.++++.++.
T Consensus        80 ~~---~~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~  155 (174)
T d1jqba2          80 KN---GHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPG-GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGL  155 (174)
T ss_dssp             GG---SCHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCCSSSEEEEETTTTGGGTBCCEEEEBC
T ss_pred             cc---hhHHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcC-CEEEEEeecCCCCcCcCcHhHHHHHhCccEEEEec
Confidence            88   8899999999998 9999999999988799999999998 99999997655555554333   234478898886


Q ss_pred             ccCCCchhhHHHHHHHHHcCC
Q 017457          312 FGGLKPRSDIATLAQKYLDKE  332 (371)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~g~  332 (371)
                      ....  +...++++++++.|+
T Consensus       156 ~~~~--r~~~e~l~~li~~gk  174 (174)
T d1jqba2         156 CPGG--RLRAERLRDMVVYNR  174 (174)
T ss_dssp             CCCH--HHHHHHHHHHHHTTS
T ss_pred             CCCC--cccHHHHHHHHHcCC
Confidence            5443  345677888988874

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.94  E-value=6.5e-26  Score=189.01  Aligned_cols=172  Identities=38%  Similarity=0.658  Sum_probs=149.8

Q ss_pred             CcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCC
Q 017457          157 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA  236 (371)
Q Consensus       157 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~  236 (371)
                      ++++||.++|++.|+|+++.+.+++++|++|+|+|+|++|++++|+++++|+.+||+++.+++|++.++++|+++++|+.
T Consensus         3 P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~~   82 (176)
T d1d1ta2           3 PPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPK   82 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             CHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECcc
Confidence            47899999999999999988889999999999999999999999999999987999999999999999999999999977


Q ss_pred             CCCCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCC
Q 017457          237 TCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGL  315 (371)
Q Consensus       237 ~~~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  315 (371)
                      +  .....+.+.+.+.+ |+|++||++|....+..++..+.+++|+++.+|.........+++..++.++++.|+.+++.
T Consensus        83 ~--~~~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~  160 (176)
T d1d1ta2          83 D--STKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGL  160 (176)
T ss_dssp             G--CSSCHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGC
T ss_pred             c--cchHHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccccccCCCHHHHhCCCEEEEEEEeCC
Confidence            6  13345666676766 99999999999987888887776544899999987666677787777778899999998888


Q ss_pred             CchhhHHHHHHHHHc
Q 017457          316 KPRSDIATLAQKYLD  330 (371)
Q Consensus       316 ~~~~~~~~~~~~~~~  330 (371)
                      .+++++.++++++.+
T Consensus       161 ~~~~dip~li~~~~~  175 (176)
T d1d1ta2         161 KSRDDVPKLVTEFLA  175 (176)
T ss_dssp             CHHHHHHHHHHHHTT
T ss_pred             CcHHHHHHHHHHHhC
Confidence            888899999988754

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.94  E-value=5.4e-26  Score=191.07  Aligned_cols=170  Identities=22%  Similarity=0.314  Sum_probs=145.3

Q ss_pred             cchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCC
Q 017457          158 LGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPAT  237 (371)
Q Consensus       158 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~  237 (371)
                      +..+|.+.|+++|||+++.+..++++|++|||+|+|++|++++|+|+++|+.+|++++++++|++.++++|+++++|+.+
T Consensus         3 ~~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~   82 (182)
T d1vj0a2           3 LDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRE   82 (182)
T ss_dssp             HHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTT
T ss_pred             HHHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECCCccchhheecccccccccccccccccccccccccccceEEEeccc
Confidence            45678889999999998888889999999999999999999999999999978999999999999999999999999887


Q ss_pred             CCCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHH-Hh-cCceEEEeeccC
Q 017457          238 CGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-IL-KGRSVCGTYFGG  314 (371)
Q Consensus       238 ~~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~-~~~~~~g~~~~~  314 (371)
                      .+..+..+.+.+++++ |+|+||||+|++..++.++++++++ |+++.+|........+++... ++ +++++.|+..++
T Consensus        83 ~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~l~~k~l~i~G~~~~~  161 (182)
T d1vj0a2          83 TSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSD  161 (182)
T ss_dssp             SCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCCC
T ss_pred             cchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCC-CEEEEEeecCCCCccccccHHHHHHCCcEEEEEEeCC
Confidence            2223345567788888 9999999999988799999999998 999999976555667777654 33 489999986554


Q ss_pred             CCchhhHHHHHHHHHcC
Q 017457          315 LKPRSDIATLAQKYLDK  331 (371)
Q Consensus       315 ~~~~~~~~~~~~~~~~g  331 (371)
                         .+++++++++++++
T Consensus       162 ---~~~~~~~~~~i~~~  175 (182)
T d1vj0a2         162 ---TSHFVKTVSITSRN  175 (182)
T ss_dssp             ---HHHHHHHHHHHHTC
T ss_pred             ---HHHHHHHHHHHHHC
Confidence               56899999998876

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=2e-26  Score=186.53  Aligned_cols=132  Identities=19%  Similarity=0.223  Sum_probs=113.9

Q ss_pred             CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCC
Q 017457            7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHR   86 (371)
Q Consensus         7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~   86 (371)
                      +.|++++.+.|+|++|||+|||+|++||++|+++++|.++..  .+|.++|||++|+|+++|+++++|++||+|+.... 
T Consensus        13 e~l~~~e~~~P~p~~~eVlVkv~a~~in~~D~~~~~G~~~~~--~~p~~~G~e~~G~V~~vG~~v~~~~vGdrV~~~~~-   89 (147)
T d1qora1          13 EVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPP--SLPSGLGTEAAGIVSKVGSGVKHIKAGDRVVYAQS-   89 (147)
T ss_dssp             GGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCS--SSSBCCCSCEEEEEEEECTTCCSCCTTCEEEESCC-
T ss_pred             ceeEEEEecCCCCCCCEEEEEEEEecccceeeeeecCCCCCC--cceeeeccccccceeeeeeecccccccceeeeecc-
Confidence            458999999999999999999999999999999999998766  89999999999999999999999999999954211 


Q ss_pred             CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchh--hcc
Q 017457           87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA--CLL  164 (371)
Q Consensus        87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~a--a~~  164 (371)
                                                  .                   .|+|+||+.++.+.++++|+++++.++  +++
T Consensus        90 ----------------------------~-------------------~G~~ae~~~v~~~~~~~~P~~~~~~~a~a~~~  122 (147)
T d1qora1          90 ----------------------------A-------------------LGAYSSVHNIIADKAAILPAAIKVDVAEQQKY  122 (147)
T ss_dssp             ----------------------------S-------------------SCCSBSEEEEEGGGEEECCTTSCCCCCGGGEE
T ss_pred             ----------------------------c-------------------cccceeEEEEehHHeEEcCcccchHHHHHHHH
Confidence                                        1                   248999999999999999999987654  455


Q ss_pred             ccchhhhHHHHHHHcCCCCCCeEEE
Q 017457          165 SCGVSTGVGAAWKVAGVEVGSTVAI  189 (371)
Q Consensus       165 ~~~~~ta~~~l~~~~~~~~g~~VLI  189 (371)
                      ++...++++++.+ .++++|++|||
T Consensus       123 ~~~~~~~~~~l~~-~~~~~G~~VLI  146 (147)
T d1qora1         123 PLKDAQRAHEILE-SRATQGSSLLI  146 (147)
T ss_dssp             EGGGHHHHHHHHH-TTCCCBCCEEE
T ss_pred             HHHHHHHHHHHHH-hCCCCCCEEEe
Confidence            6677777776644 67999999998

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.93  E-value=8.6e-26  Score=187.72  Aligned_cols=167  Identities=21%  Similarity=0.263  Sum_probs=149.4

Q ss_pred             CCcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEc
Q 017457          156 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN  234 (371)
Q Consensus       156 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~  234 (371)
                      ||+.|||.++|++.|||+++ +..++++|++|||+|+ |++|++++|+++++|..+|++++++++|++.++++|++++++
T Consensus         1 l~~~eAA~l~c~~~Ta~~al-~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~   79 (170)
T d1jvba2           1 LNAVEAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVIN   79 (170)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeec
Confidence            68899999999999999975 6789999999999996 999999999999999779999999999999999999999999


Q ss_pred             CCCCCCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeec
Q 017457          235 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYF  312 (371)
Q Consensus       235 ~~~~~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~  312 (371)
                      +.+   +++.+.+++.+.+ ++|++|||+|++..++.++++++++ |+++.+|....  ..+++...++. ++++.|+..
T Consensus        80 ~~~---~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~k~i~i~Gs~~  153 (170)
T d1jvba2          80 ASM---QDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGLFGA--DLHYHAPLITLSEIQFVGSLV  153 (170)
T ss_dssp             TTT---SCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEE-EEEEECCSSCC--CCCCCHHHHHHHTCEEEECCS
T ss_pred             cCC---cCHHHHHHHHhhcccchhhhcccccchHHHhhhhhcccC-CEEEEeccccC--ccccCHHHHHhCCcEEEEEec
Confidence            887   8899999999988 8999999999988889999999998 99999997533  45666666655 999999875


Q ss_pred             cCCCchhhHHHHHHHHHcCC
Q 017457          313 GGLKPRSDIATLAQKYLDKE  332 (371)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~g~  332 (371)
                      ++   +++++++++++++||
T Consensus       154 ~~---~~d~~~~l~lv~~GK  170 (170)
T d1jvba2         154 GN---QSDFLGIMRLAEAGK  170 (170)
T ss_dssp             CC---HHHHHHHHHHHHTTS
T ss_pred             CC---HHHHHHHHHHHHcCC
Confidence            54   678999999999985

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.93  E-value=6.8e-26  Score=187.96  Aligned_cols=170  Identities=12%  Similarity=0.119  Sum_probs=134.4

Q ss_pred             CCcchhhccccchhhhHHHHH---HHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcce
Q 017457          156 IPLGIACLLSCGVSTGVGAAW---KVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD  231 (371)
Q Consensus       156 l~~~~aa~~~~~~~ta~~~l~---~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~  231 (371)
                      +|++|||+++++++|||+++.   +....++|++|||+|+ |++|.+++|+||.+|+ +|+++.+++++.++++++|+++
T Consensus         1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga-~Viat~~s~~k~~~~~~lGa~~   79 (176)
T d1xa0a2           1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGAKE   79 (176)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTCSE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCC-ceEEecCchHHHHHHHhcccce
Confidence            689999999999999997643   4577899999999987 9999999999999999 9999999999999999999999


Q ss_pred             EEcCCCCCCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEe
Q 017457          232 FINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGT  310 (371)
Q Consensus       232 v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~  310 (371)
                      ++|+++    .+.+.++...++++|+|||++|+.. +..++++|+++ |+++.+|.. .+...+++...++. ++++.|.
T Consensus        80 vi~~~~----~~~~~~~~~~~~gvD~vid~vgg~~-~~~~l~~l~~~-Griv~~G~~-~g~~~~~~~~~~~~k~~~i~Gv  152 (176)
T d1xa0a2          80 VLARED----VMAERIRPLDKQRWAAAVDPVGGRT-LATVLSRMRYG-GAVAVSGLT-GGAEVPTTVHPFILRGVSLLGI  152 (176)
T ss_dssp             EEECC-------------CCSCCEEEEEECSTTTT-HHHHHHTEEEE-EEEEECSCC-SSSCCCCCSHHHHHTTCEEEEC
T ss_pred             eeecch----hHHHHHHHhhccCcCEEEEcCCchh-HHHHHHHhCCC-ceEEEeecc-cCcccCCCHHHHHHCCcEEEEE
Confidence            999865    3444444434449999999999988 99999999998 999999984 44556677666655 8999997


Q ss_pred             eccCCCchhhHHHHHHHHHcCCCCC
Q 017457          311 YFGGLKPRSDIATLAQKYLDKELNL  335 (371)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~g~~~~  335 (371)
                      .... .+.+...++++.++ +++.+
T Consensus       153 ~~~~-~~~~~~~~~~~~la-g~lkP  175 (176)
T d1xa0a2         153 DSVY-CPMDLRLRIWERLA-GDLKP  175 (176)
T ss_dssp             CSSS-CCHHHHHHHHHHHH-TTTCC
T ss_pred             eCCc-CCHHHHHHHHHHHh-cccCC
Confidence            4332 33566667776664 55543

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.93  E-value=7.6e-25  Score=182.96  Aligned_cols=174  Identities=41%  Similarity=0.705  Sum_probs=143.7

Q ss_pred             CcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCC
Q 017457          157 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA  236 (371)
Q Consensus       157 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~  236 (371)
                      ++++||.++|++.|||+++.+.+++++|++|||+|+|++|++++++++.+|+.+|++++++++|++.++++|+++++++.
T Consensus         2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~   81 (176)
T d2jhfa2           2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECCCCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecC
Confidence            46789999999999999998899999999999999999999999999999988999999999999999999999998865


Q ss_pred             CCCCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCC
Q 017457          237 TCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGL  315 (371)
Q Consensus       237 ~~~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  315 (371)
                      +  .++......+.+.+ |+|++||++|.+...+.++..+.++.|.++..+..............+++++++.|+..+++
T Consensus        82 ~--~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~  159 (176)
T d2jhfa2          82 D--YKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGF  159 (176)
T ss_dssp             G--CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGC
T ss_pred             C--chhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCCcccccccHHHHhCCCEEEEEEEeCC
Confidence            4  13444455555544 99999999999987899999998862444444443333444555555667999999988888


Q ss_pred             CchhhHHHHHHHHHcCC
Q 017457          316 KPRSDIATLAQKYLDKE  332 (371)
Q Consensus       316 ~~~~~~~~~~~~~~~g~  332 (371)
                      .+++++.++++++++||
T Consensus       160 ~~~~~~~~li~~~~~GK  176 (176)
T d2jhfa2         160 KSKDSVPKLVADFMAKK  176 (176)
T ss_dssp             CHHHHHHHHHHHHHTTS
T ss_pred             CHHHHHHHHHHHHHCcC
Confidence            77889999999999885

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.93  E-value=4.2e-25  Score=183.76  Aligned_cols=165  Identities=19%  Similarity=0.314  Sum_probs=144.1

Q ss_pred             CcchhhccccchhhhHHHHHHHc-CCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcC
Q 017457          157 PLGIACLLSCGVSTGVGAAWKVA-GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP  235 (371)
Q Consensus       157 ~~~~aa~~~~~~~ta~~~l~~~~-~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~  235 (371)
                      .+.++|+++|+++|||+++.+.. .+++|++|||+|+|++|++++|+|+++|+.+|++++++++|++.++++|+++++++
T Consensus         5 ~l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~   84 (172)
T d1h2ba2           5 KLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDA   84 (172)
T ss_dssp             HHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEET
T ss_pred             hHHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCCChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecC
Confidence            36789999999999999987655 48999999999999999999999999998899999999999999999999999998


Q ss_pred             CCCCCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeecc
Q 017457          236 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFG  313 (371)
Q Consensus       236 ~~~~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~  313 (371)
                      .+    +..+.+.+.+.+ ++|+|||++|+...++.+++.++++ |+++.+|.. .  ..+++...++. ++++.|+..+
T Consensus        85 ~~----~~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~-G~iv~~G~~-~--~~~~~~~~l~~k~~~i~Gs~~~  156 (172)
T d1h2ba2          85 RR----DPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRM-GRLIIVGYG-G--ELRFPTIRVISSEVSFEGSLVG  156 (172)
T ss_dssp             TS----CHHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEE-EEEEECCCS-S--CCCCCHHHHHHTTCEEEECCSC
T ss_pred             cc----cHHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCC-CEEEEEeCc-c--cccCCHHHHHhCCcEEEEEEec
Confidence            76    556667778877 9999999999988799999999998 999999963 2  35677777666 8999999755


Q ss_pred             CCCchhhHHHHHHHHHcCC
Q 017457          314 GLKPRSDIATLAQKYLDKE  332 (371)
Q Consensus       314 ~~~~~~~~~~~~~~~~~g~  332 (371)
                      +   +++++++++++++||
T Consensus       157 ~---~~d~~~~l~l~~~GK  172 (172)
T d1h2ba2         157 N---YVELHELVTLALQGK  172 (172)
T ss_dssp             C---HHHHHHHHHHHHTTS
T ss_pred             C---HHHHHHHHHHHHcCC
Confidence            5   578999999999985

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=1.1e-25  Score=188.59  Aligned_cols=169  Identities=19%  Similarity=0.165  Sum_probs=137.8

Q ss_pred             CCcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEc
Q 017457          156 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN  234 (371)
Q Consensus       156 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~  234 (371)
                      +|+++||+++++++|||+++.+..++++|++|||+|+ |++|++++|+|+++|+ +|+++++++++++.++++|+++++|
T Consensus         1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga-~Vi~~~~s~~k~~~~~~lGa~~vi~   79 (179)
T d1qora2           1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVIN   79 (179)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCC-eEeecccchHHHHHHHhcCCeEEEE
Confidence            5899999999999999999988889999999999987 8899999999999999 9999999999999999999999999


Q ss_pred             CCCCCCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcC--ceEEEee
Q 017457          235 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKG--RSVCGTY  311 (371)
Q Consensus       235 ~~~~~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~--~~~~g~~  311 (371)
                      +++   +++.+.++++|++ ++|+++|+++++. +..++++++++ |+++.++... .....++...+...  ..+.+..
T Consensus        80 ~~~---~d~~~~v~~~t~g~g~d~v~d~~g~~~-~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~  153 (179)
T d1qora2          80 YRE---EDLVERLKEITGGKKVRVVYDSVGRDT-WERSLDCLQRR-GLMVSFGNSS-GAVTGVNLGILNQKGSLYVTRPS  153 (179)
T ss_dssp             TTT---SCHHHHHHHHTTTCCEEEEEECSCGGG-HHHHHHTEEEE-EEEEECCCTT-CCCCCBCTHHHHHTTSCEEECCC
T ss_pred             CCC---CCHHHHHHHHhCCCCeEEEEeCccHHH-HHHHHHHHhcC-Ceeeeccccc-CCccccchhhhhccceEEEEeeE
Confidence            988   8999999999988 9999999999877 99999999998 9999998743 33444444444442  3332222


Q ss_pred             ccCC-Cch----hhHHHHHHHHHcC
Q 017457          312 FGGL-KPR----SDIATLAQKYLDK  331 (371)
Q Consensus       312 ~~~~-~~~----~~~~~~~~~~~~g  331 (371)
                      +..+ ..+    +.+.++++++++|
T Consensus       154 l~~~~~~~~~~~~~~~~l~~lv~~G  178 (179)
T d1qora2         154 LQGYITTREELTEASNELFSLIASG  178 (179)
T ss_dssp             HHHHCCSHHHHHHHHHHHHHHHHTT
T ss_pred             EeeecCCHHHHHHHHHHHHHHHHCc
Confidence            2111 112    2345577777776

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.93  E-value=9.6e-25  Score=182.18  Aligned_cols=173  Identities=42%  Similarity=0.704  Sum_probs=144.2

Q ss_pred             CcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCC
Q 017457          157 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA  236 (371)
Q Consensus       157 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~  236 (371)
                      ++++||.++|++.|+|+++.+.+++++|++|+|+|+|++|++++++++..|+.+|++++++++|++.++++|+++++|+.
T Consensus         2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~   81 (175)
T d1cdoa2           2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPN   81 (175)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGG
T ss_pred             CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEecCCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcCC
Confidence            46789999999999999988889999999999999999999999999999988999999999999999999999999976


Q ss_pred             CCCCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCC
Q 017457          237 TCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGL  315 (371)
Q Consensus       237 ~~~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  315 (371)
                      +  +.+..+.+.+.+.+ |+|++||++|+...++.++..+.++ |.++.++..............++.++++.|+..+++
T Consensus        82 ~--~~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g-~~~~~~~g~~~~~~~~~~~~~~~~~~~i~Gs~~G~~  158 (175)
T d1cdoa2          82 D--HSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKG-WGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMFGGF  158 (175)
T ss_dssp             G--CSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTT-TCEEEECSCCSSSCEEECHHHHHTTCEEEECSGGGC
T ss_pred             C--cchhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCC-CcceeEEEecCCcccCccHHHHHCCcEEEEEEEeCC
Confidence            5  13445566666655 9999999999988788888888776 555444433444444444555566899999988888


Q ss_pred             CchhhHHHHHHHHHcCC
Q 017457          316 KPRSDIATLAQKYLDKE  332 (371)
Q Consensus       316 ~~~~~~~~~~~~~~~g~  332 (371)
                      ..++++.++++++++||
T Consensus       159 ~~~~d~~~~i~l~~~gK  175 (175)
T d1cdoa2         159 KGKDGVPKMVKAYLDKK  175 (175)
T ss_dssp             CHHHHHHHHHHHHHTTS
T ss_pred             cHHHHHHHHHHHHHcCC
Confidence            77889999999999985

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.92  E-value=1.4e-24  Score=179.61  Aligned_cols=164  Identities=20%  Similarity=0.305  Sum_probs=142.8

Q ss_pred             CCcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcC
Q 017457          156 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP  235 (371)
Q Consensus       156 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~  235 (371)
                      +|+++||.++|+++|||+++ +++++++|++|+|+|+|++|++++|+||++|+ +|++++++++|++.++++|+++++|+
T Consensus         1 v~f~~aA~l~ca~~Ta~~al-~~~~~~~g~~VlV~GaG~vG~~~~~~ak~~G~-~Vi~~~~~~~~~~~a~~~Ga~~~i~~   78 (166)
T d1llua2           1 VEFAEIAPILCAGVTVYKGL-KQTNARPGQWVAISGIGGLGHVAVQYARAMGL-HVAAIDIDDAKLELARKLGASLTVNA   78 (166)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeeccccHHHHHHHHHHcCC-ccceecchhhHHHhhhccCccccccc
Confidence            57899999999999999976 56899999999999999999999999999998 99999999999999999999999998


Q ss_pred             CCCCCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccC
Q 017457          236 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGG  314 (371)
Q Consensus       236 ~~~~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~  314 (371)
                      .+   +++.+.+.+.+. +.+.+++++++...++.++++++++ |+++.+|...  ...+++...++. ++++.|+..++
T Consensus        79 ~~---~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~k~~~i~Gs~~~~  151 (166)
T d1llua2          79 RQ---EDPVEAIQRDIG-GAHGVLVTAVSNSAFGQAIGMARRG-GTIALVGLPP--GDFPTPIFDVVLKGLHIAGSIVGT  151 (166)
T ss_dssp             TT---SCHHHHHHHHHS-SEEEEEECCSCHHHHHHHHTTEEEE-EEEEECCCCS--SEEEEEHHHHHHTTCEEEECCSCC
T ss_pred             cc---hhHHHHHHHhhc-CCcccccccccchHHHHHHHHhcCC-cEEEEEEecC--CCccCCHHHHHhCCcEEEEEeecC
Confidence            88   788888887766 5666677777777799999999998 9999999643  346677777666 99999986554


Q ss_pred             CCchhhHHHHHHHHHcC
Q 017457          315 LKPRSDIATLAQKYLDK  331 (371)
Q Consensus       315 ~~~~~~~~~~~~~~~~g  331 (371)
                         +++++++++++++|
T Consensus       152 ---~~d~~e~l~l~~~G  165 (166)
T d1llua2         152 ---RADLQEALDFAGEG  165 (166)
T ss_dssp             ---HHHHHHHHHHHHTT
T ss_pred             ---HHHHHHHHHHHHCc
Confidence               57899999999987

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.9e-24  Score=178.47  Aligned_cols=167  Identities=16%  Similarity=0.321  Sum_probs=140.9

Q ss_pred             CCcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcC
Q 017457          156 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP  235 (371)
Q Consensus       156 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~  235 (371)
                      +|+++||.+. ++++||++ .+++++++|++|+|+|+|++|++++|+|+++|+++|++++++++|++.++++|+++++++
T Consensus         1 vS~e~Aal~e-pla~a~~a-~~~~~~~~gd~VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~   78 (171)
T d1pl8a2           1 VTFEEGALIE-PLSVGIHA-CRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQI   78 (171)
T ss_dssp             SCHHHHHHHH-HHHHHHHH-HHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred             CCHHHHHHHH-HHHHHHHH-HHHhCCCCCCEEEEECCCccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCcccccc
Confidence            5788988775 88899996 467899999999999999999999999999999889999999999999999999999988


Q ss_pred             CCCCCccHHHHHHHh---hCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEee
Q 017457          236 ATCGDKTVSQVIKEM---TDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTY  311 (371)
Q Consensus       236 ~~~~~~~~~~~i~~~---~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~  311 (371)
                      .+   .+..+..+.+   .++++|+||||+|++..++.++++++++ |+++.+|....  ..+++...++. ++++.|+.
T Consensus        79 ~~---~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~g-G~iv~~G~~~~--~~~~~~~~~~~k~l~i~Gs~  152 (171)
T d1pl8a2          79 SK---ESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGLGSE--MTTVPLLHAAIREVDIKGVF  152 (171)
T ss_dssp             SS---CCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCCS--CCCCCHHHHHHTTCEEEECC
T ss_pred             cc---cccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCC-CEEEEEecCCC--CCccCHHHHHHCCcEEEEEe
Confidence            77   5554444433   2338999999999998899999999998 99999997543  45677777666 89999985


Q ss_pred             ccCCCchhhHHHHHHHHHcCCCC
Q 017457          312 FGGLKPRSDIATLAQKYLDKELN  334 (371)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~g~~~  334 (371)
                      ..    .++++++++++++|+++
T Consensus       153 ~~----~~~~~~al~li~~gkid  171 (171)
T d1pl8a2         153 RY----CNTWPVAISMLASKSVN  171 (171)
T ss_dssp             SC----SSCHHHHHHHHHTTSCC
T ss_pred             CC----HhHHHHHHHHHHcCCCC
Confidence            22    35799999999999864

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.92  E-value=1.3e-25  Score=182.74  Aligned_cols=135  Identities=16%  Similarity=0.149  Sum_probs=114.6

Q ss_pred             cEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCCC
Q 017457            9 LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDC   88 (371)
Q Consensus         9 l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~   88 (371)
                      +++++++.|+|++|||||||.|++||++|++.+.|.++... ..|.++|+|++|+|++  +.++.|++||+|......  
T Consensus        18 ~~i~~v~~P~~~~~eVlVkV~a~gin~~D~~~~~g~~~~~~-~~p~v~g~e~~G~v~~--~~~~~~~~g~~v~~~~~~--   92 (152)
T d1xa0a1          18 AGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVK-TYPFVPGIDLAGVVVS--SQHPRFREGDEVIATGYE--   92 (152)
T ss_dssp             EEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCC-SSSBCCCSEEEEEEEE--CCSSSCCTTCEEEEESTT--
T ss_pred             EEEEEccCCCCCCCEEEEEEEEeCCChHHHHHHhhcccccc-cccceeeeeeeeeeec--cCCCccccCCEEEEecCc--
Confidence            56889999999999999999999999999999999876543 7899999999999999  456789999999654321  


Q ss_pred             CCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccch
Q 017457           89 GECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGV  168 (371)
Q Consensus        89 ~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~~  168 (371)
                                            .+...+                   |+|+||+.+++++++++|+++| .+||+++++.
T Consensus        93 ----------------------~~~~~~-------------------G~~aEy~~v~~~~~~~iP~~l~-~~aa~l~~a~  130 (152)
T d1xa0a1          93 ----------------------IGVTHF-------------------GGYSEYARLHGEWLVPLPKGLE-RIAQEISLAE  130 (152)
T ss_dssp             ----------------------BTTTBC-------------------CSSBSEEEECGGGCEECCTTHH-HHEEEEEGGG
T ss_pred             ----------------------cccccC-------------------CCcceeeeehhhccccCCCCCC-HHHHHHHHHH
Confidence                                  223333                   4999999999999999999998 5788899899


Q ss_pred             hhhHHHHHHHcCCCCCCeEEEEc
Q 017457          169 STGVGAAWKVAGVEVGSTVAIFG  191 (371)
Q Consensus       169 ~ta~~~l~~~~~~~~g~~VLI~G  191 (371)
                      +||+.++....+++ |++|||+|
T Consensus       131 ~ta~~~~~~~~~~~-G~tVL~l~  152 (152)
T d1xa0a1         131 LPQALKRILRGELR-GRTVVRLA  152 (152)
T ss_dssp             HHHHHHHHHHTCCC-SEEEEECC
T ss_pred             HHHHHHHHHhcCCC-CCEEEEcC
Confidence            99988888878875 99999975

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.92  E-value=1.4e-24  Score=182.31  Aligned_cols=164  Identities=22%  Similarity=0.216  Sum_probs=138.2

Q ss_pred             hccccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCC
Q 017457          162 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD  240 (371)
Q Consensus       162 a~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~  240 (371)
                      +++.++++|||+++.+..++++|++|||+|+ |++|++++|+||.+|+ +||++++++++.++++++|+++++++++   
T Consensus         8 ~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~Ga~~vi~~~~---   83 (182)
T d1v3va2           8 GTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIGFDAAFNYKT---   83 (182)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTS---
T ss_pred             HHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCC-EEEEeCCCHHHHHHHHhhhhhhhccccc---
Confidence            4677899999999999999999999999988 9999999999999999 9999999999999999999999999888   


Q ss_pred             ccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCC-----CCceecCHHHHhc-CceEEEeecc
Q 017457          241 KTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH-----GSPISLNSIEILK-GRSVCGTYFG  313 (371)
Q Consensus       241 ~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-----~~~~~~~~~~~~~-~~~~~g~~~~  313 (371)
                      +++.+.+.+.+.+ ++|+|||++|++. ++.++++++++ |+++.+|....     .....++...++. ++++.|++..
T Consensus        84 ~~~~~~~~~~~~~~Gvd~v~D~vG~~~-~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~  161 (182)
T d1v3va2          84 VNSLEEALKKASPDGYDCYFDNVGGEF-LNTVLSQMKDF-GKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVY  161 (182)
T ss_dssp             CSCHHHHHHHHCTTCEEEEEESSCHHH-HHHHGGGEEEE-EEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGG
T ss_pred             ccHHHHHHHHhhcCCCceeEEecCchh-hhhhhhhccCC-CeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEe
Confidence            7888888887777 9999999999766 99999999998 99999996322     1223445555554 8999999777


Q ss_pred             CCCc---hhhHHHHHHHHHcC
Q 017457          314 GLKP---RSDIATLAQKYLDK  331 (371)
Q Consensus       314 ~~~~---~~~~~~~~~~~~~g  331 (371)
                      ++..   .+.++++++++++|
T Consensus       162 ~~~~~~~~~~~~~l~~~i~~G  182 (182)
T d1v3va2         162 RWQGDVREKALRDLMKWVLEG  182 (182)
T ss_dssp             GCCHHHHHHHHHHHHHHHHTT
T ss_pred             ccChHHHHHHHHHHHHHHhCc
Confidence            6642   24467778888775

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.92  E-value=7e-24  Score=175.67  Aligned_cols=167  Identities=25%  Similarity=0.413  Sum_probs=144.4

Q ss_pred             CCcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcC
Q 017457          156 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP  235 (371)
Q Consensus       156 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~  235 (371)
                      +|+++||+++|+++|||+++ +..++++|++|||+|+|++|++++++|+..|+ +|++++++++|+++++++|++.++++
T Consensus         1 ls~eeAA~l~~~~~Ta~~al-~~~~~~~g~~vlv~G~G~iG~~a~~~a~~~g~-~v~~~~~~~~r~~~~k~~Ga~~~~~~   78 (168)
T d1rjwa2           1 LSFEEAAPIFCAGVTTYKAL-KVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNP   78 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeecccchhhhhHHHhcCCC-eEeccCCCHHHhhhhhhcCcceeccc
Confidence            58999999999999999975 57899999999999999999999999999999 89999999999999999999999999


Q ss_pred             CCCCCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccC
Q 017457          236 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGG  314 (371)
Q Consensus       236 ~~~~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~  314 (371)
                      .+   .++.+.+++.+.+. +.+++++++...++.++++++++ |+++.+|...  ...+++...++. ++++.|+..+.
T Consensus        79 ~~---~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~a~~~l~~~-G~i~~~g~~~--~~~~~~~~~~~~~~~~i~gs~~~~  151 (168)
T d1rjwa2          79 LK---EDAAKFMKEKVGGV-HAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLPP--EEMPIPIFDTVLNGIKIIGSIVGT  151 (168)
T ss_dssp             TT---SCHHHHHHHHHSSE-EEEEESSCCHHHHHHHHHHEEEE-EEEEECCCCS--SEEEEEHHHHHHTTCEEEECCSCC
T ss_pred             cc---chhhhhcccccCCC-ceEEeecCCHHHHHHHHHHhccC-CceEeccccc--CCCCCCHHHHHHCCcEEEEEeeCC
Confidence            88   78999999988754 44455666667799999999998 9999999743  345666666666 89999986443


Q ss_pred             CCchhhHHHHHHHHHcCCCC
Q 017457          315 LKPRSDIATLAQKYLDKELN  334 (371)
Q Consensus       315 ~~~~~~~~~~~~~~~~g~~~  334 (371)
                         +++++++++++++|+++
T Consensus       152 ---~~~~~~~l~l~~~Gkik  168 (168)
T d1rjwa2         152 ---RKDLQEALQFAAEGKVK  168 (168)
T ss_dssp             ---HHHHHHHHHHHHTTSCC
T ss_pred             ---HHHHHHHHHHHHhCCCC
Confidence               67899999999999763

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.92  E-value=1.1e-25  Score=177.71  Aligned_cols=125  Identities=17%  Similarity=0.171  Sum_probs=109.2

Q ss_pred             ccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEee
Q 017457            3 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP   82 (371)
Q Consensus         3 ~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~   82 (371)
                      .+.+.++++++++.|+|+++||+||++|++||++|++.++|.++... .+|+++|||++|+|           +||+|..
T Consensus         7 ~~~G~~l~~~e~~~p~p~~~eVlVkv~a~gin~~D~~~~~G~~~~~~-~~P~v~G~E~~G~V-----------vGd~V~~   74 (131)
T d1iz0a1           7 KRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRL-HPPFIPGMEVVGVV-----------EGRRYAA   74 (131)
T ss_dssp             CSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCC-CSSBCCCCEEEEEE-----------TTEEEEE
T ss_pred             ccCCCCCEEEEccCCCCCCCEEEEEEEEEeccccccccccccccccc-cceeEeeeeeEEee-----------ccceEEE
Confidence            34566799999999999999999999999999999999999876543 79999999999999           4999954


Q ss_pred             ccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhh
Q 017457           83 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC  162 (371)
Q Consensus        83 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa  162 (371)
                      ..                              .+                   |+|+||+.+++++++++|+++|+++||
T Consensus        75 ~~------------------------------~~-------------------G~~aey~~v~~~~~~~~P~~~~~~~aa  105 (131)
T d1iz0a1          75 LV------------------------------PQ-------------------GGLAERVAVPKGALLPLPEGRPVVGPV  105 (131)
T ss_dssp             EC------------------------------SS-------------------CCSBSEEEEEGGGCEECCTTCCCEEEE
T ss_pred             Ee------------------------------cc-------------------CccceeeeeCHHHeEEccCCCCHHHHH
Confidence            32                              22                   499999999999999999999999999


Q ss_pred             ccccchhhhHHHHHHHcCCCCCCeEEEE
Q 017457          163 LLSCGVSTGVGAAWKVAGVEVGSTVAIF  190 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~  190 (371)
                      ++++++.|||+++.+++  +.|++||++
T Consensus       106 ~~~~~~~Ta~~al~~~g--~~g~tvl~l  131 (131)
T d1iz0a1         106 FPFAEAEAAFRALLDRG--HTGKVVVRL  131 (131)
T ss_dssp             EEGGGHHHHHHHTTCTT--CCBEEEEEC
T ss_pred             HHHHHHHHHHHHHHhcc--cCCCEEEEC
Confidence            99999999999986655  458999873

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=2e-24  Score=178.86  Aligned_cols=164  Identities=15%  Similarity=0.254  Sum_probs=134.6

Q ss_pred             CCCcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEc
Q 017457          155 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN  234 (371)
Q Consensus       155 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~  234 (371)
                      +.+++++|.++|++.|+|+++ +.+++++|++|||+|+|++|++++|+||++|+ ++++++++++++++++++|++++++
T Consensus         3 ~~~~a~~Apl~Cag~Tay~al-~~~~~~~G~~VlI~GaG~vG~~a~qlak~~Ga-~~i~~~~~~~~~~~a~~lGad~~i~   80 (168)
T d1uufa2           3 QEQLAAVAPLLCAGITTYSPL-RHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGADEVVN   80 (168)
T ss_dssp             GGGHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEE
T ss_pred             cccHHHHHHHHhHHHHHHHHH-HHhCCCCCCEEEEeccchHHHHHHHHhhcccc-cchhhccchhHHHHHhccCCcEEEE
Confidence            456778888999999999976 67999999999999999999999999999999 7888999999999999999999999


Q ss_pred             CCCCCCccHHHHHHHhhC-CCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeec
Q 017457          235 PATCGDKTVSQVIKEMTD-GGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYF  312 (371)
Q Consensus       235 ~~~~~~~~~~~~i~~~~~-gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~  312 (371)
                      +.+   .+..     ... +++|++||++|++..++.++++++++ |+++.+|... .....++...++. ++++.|+..
T Consensus        81 ~~~---~~~~-----~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~l~~k~~~i~Gs~~  150 (168)
T d1uufa2          81 SRN---ADEM-----AAHLKSFDFILNTVAAPHNLDDFTTLLKRD-GTMTLVGAPA-TPHKSPEVFNLIMKRRAIAGSMI  150 (168)
T ss_dssp             TTC---HHHH-----HTTTTCEEEEEECCSSCCCHHHHHTTEEEE-EEEEECCCC--------CHHHHHTTTCEEEECCS
T ss_pred             Cch---hhHH-----HHhcCCCceeeeeeecchhHHHHHHHHhcC-CEEEEeccCC-CCcccccHHHHHHCCcEEEEEee
Confidence            877   3321     222 38999999999887799999999998 9999999743 3344566666655 899999875


Q ss_pred             cCCCchhhHHHHHHHHHcCCC
Q 017457          313 GGLKPRSDIATLAQKYLDKEL  333 (371)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~g~~  333 (371)
                      ++   +.++++++++++++++
T Consensus       151 ~~---~~d~~e~l~l~a~~~I  168 (168)
T d1uufa2         151 GG---IPETQEMLDFCAEHGI  168 (168)
T ss_dssp             CC---HHHHHHHHHHHHHHTC
T ss_pred             cC---HHHHHHHHHHHHHcCC
Confidence            54   6789999999998764

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.91  E-value=1e-24  Score=181.09  Aligned_cols=159  Identities=19%  Similarity=0.268  Sum_probs=124.9

Q ss_pred             CCcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEc
Q 017457          156 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN  234 (371)
Q Consensus       156 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~  234 (371)
                      +|+++||++++++.|||+++ +.+++++|++|||+|+ |++|++++|+||++|+ +|+++++++++++.++++|+++++|
T Consensus         1 ls~eeAA~l~~~~~TA~~al-~~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~-~vi~~~~~~~~~~~~~~lGa~~~i~   78 (171)
T d1iz0a2           1 LSPEEAAAFPVSFLTAYLAL-KRAQARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAAT   78 (171)
T ss_dssp             CCHHHHHTSHHHHHHHHHHH-HHTTCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEeccccchhhhhhhhccccc-ccccccccccccccccccccceeee
Confidence            68999999999999999987 4589999999999997 9999999999999999 9999999999999999999999998


Q ss_pred             CCCCCCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeec
Q 017457          235 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYF  312 (371)
Q Consensus       235 ~~~~~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~  312 (371)
                      +.+        ...+.+.+ |+|+|||++| .. ++.++++++++ |+++.+|.. ++...+++...++. ++++.|+++
T Consensus        79 ~~~--------~~~~~~~~~g~D~v~d~~G-~~-~~~~~~~l~~~-G~~v~~G~~-~g~~~~~~~~~~~~k~~~i~g~~~  146 (171)
T d1iz0a2          79 YAE--------VPERAKAWGGLDLVLEVRG-KE-VEESLGLLAHG-GRLVYIGAA-EGEVAPIPPLRLMRRNLAVLGFWL  146 (171)
T ss_dssp             GGG--------HHHHHHHTTSEEEEEECSC-TT-HHHHHTTEEEE-EEEEEC--------CCCCTTHHHHTTCEEEECCH
T ss_pred             hhh--------hhhhhhccccccccccccc-hh-HHHHHHHHhcC-CcEEEEeCC-CCCCCCccHHHHHHCCcEEEEEeC
Confidence            754        23444555 9999999988 44 78999999998 999999974 33445566666555 999999875


Q ss_pred             cCCCc-hhhHHHHHHHH
Q 017457          313 GGLKP-RSDIATLAQKY  328 (371)
Q Consensus       313 ~~~~~-~~~~~~~~~~~  328 (371)
                      ..+.. .+.+++++..+
T Consensus       147 ~~~~~~~~~~~~~~~~l  163 (171)
T d1iz0a2         147 TPLLREGALVEEALGFL  163 (171)
T ss_dssp             HHHTTCHHHHHHHHHHH
T ss_pred             cChhhhHHHHHHHHHHH
Confidence            54431 23344444443

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.91  E-value=2.1e-23  Score=173.06  Aligned_cols=167  Identities=19%  Similarity=0.326  Sum_probs=136.2

Q ss_pred             CCcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcC
Q 017457          156 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP  235 (371)
Q Consensus       156 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~  235 (371)
                      +|+++||.+. ++++||+++ ++.++++|++|||+|+|++|++++|+||++|+ +|++++++++|++.++++|++..++.
T Consensus         1 VS~e~Aal~e-Pla~a~~a~-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~Ga-~vi~v~~~~~r~~~a~~~ga~~~~~~   77 (170)
T d1e3ja2           1 VSLEEGALLE-PLSVGVHAC-RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVV   77 (170)
T ss_dssp             SCHHHHHTHH-HHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred             CCHHHHHHHH-HHHHHHHHH-HHhCCCCCCEEEEEcccccchhhHhhHhhhcc-cccccchHHHHHHHHHHcCCcEEEec
Confidence            5788988875 788999965 67899999999999999999999999999999 99999999999999999999877654


Q ss_pred             CCC--CCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeec
Q 017457          236 ATC--GDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYF  312 (371)
Q Consensus       236 ~~~--~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~  312 (371)
                      +..  +..+..+.+.+..++++|+||||+|++..++.++++++++ |+++.+|...  ...+++...++. ++++.|+..
T Consensus        78 ~~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~-G~iv~~G~~~--~~~~~~~~~~~~k~i~i~gs~~  154 (170)
T d1e3ja2          78 DPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLMLVGMGS--QMVTVPLVNACAREIDIKSVFR  154 (170)
T ss_dssp             CTTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCS--SCCCCCHHHHHTTTCEEEECCS
T ss_pred             cccccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcC-CceEEEecCC--CCCCcCHHHHHHCCCEEEEEEC
Confidence            331  1122334444444559999999999988899999999998 9999999743  345677777766 899999842


Q ss_pred             cCCCchhhHHHHHHHHHcCC
Q 017457          313 GGLKPRSDIATLAQKYLDKE  332 (371)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~g~  332 (371)
                      .    .++++++++++++|+
T Consensus       155 ~----~~~~~~ai~li~~Gk  170 (170)
T d1e3ja2         155 Y----CNDYPIALEMVASGR  170 (170)
T ss_dssp             C----SSCHHHHHHHHHTTS
T ss_pred             C----HHHHHHHHHHHHcCC
Confidence            2    347899999999985

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.91  E-value=1.7e-24  Score=182.84  Aligned_cols=173  Identities=18%  Similarity=0.183  Sum_probs=138.5

Q ss_pred             CCcchhhccccchhhhHHHHHHHcCCCCCCeEEEE-cC-ChHHHHHHHHHHHcCCCeEEEEcCCh----hHHHHHHHhCc
Q 017457          156 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIF-GL-GAVGLAVAEGARLNRASKIIGVDINP----EKFEIGKKFGI  229 (371)
Q Consensus       156 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~-G~-g~~G~~ai~la~~~g~~~Vi~~~~~~----~~~~~~~~lga  229 (371)
                      +|+++||+++++++|||+++.+..++++|++|||+ |+ |++|++++|+||++|+ +||++.++.    ++.+.++++|+
T Consensus         1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga-~vI~~v~~~~~~~~~~~~~~~lGa   79 (189)
T d1gu7a2           1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDRPNLDEVVASLKELGA   79 (189)
T ss_dssp             CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTC-EEEEEECCCTTHHHHHHHHHHHTC
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCC-eEEEEEecccccchHHhhhhhccc
Confidence            68999999999999999999888999999999997 65 9999999999999999 888886554    34567788999


Q ss_pred             ceEEcCCCCCCccHHHHHHHhh---CCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-Cc
Q 017457          230 TDFINPATCGDKTVSQVIKEMT---DGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GR  305 (371)
Q Consensus       230 ~~v~~~~~~~~~~~~~~i~~~~---~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~  305 (371)
                      ++++++++.+..++.+.+++.+   ++++|++||++|++. +..++++|+++ |+++.+|.. .....+++...++. ++
T Consensus        80 d~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~~-~~~~~~~l~~~-G~~v~~G~~-~~~~~~~~~~~l~~k~~  156 (189)
T d1gu7a2          80 TQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKS-STGIARKLNNN-GLMLTYGGM-SFQPVTIPTSLYIFKNF  156 (189)
T ss_dssp             SEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHH-HHHHHHTSCTT-CEEEECCCC-SSCCEEECHHHHHHSCC
T ss_pred             cEEEeccccchhHHHHHHHHHHhhccCCceEEEECCCcch-hhhhhhhhcCC-cEEEEECCc-cCCCccCcHHHHHHCCc
Confidence            9999875423345666666654   348999999999887 89999999998 999999974 34456777777665 89


Q ss_pred             eEEEeeccCCC------chhhHHHHHHHHHcCC
Q 017457          306 SVCGTYFGGLK------PRSDIATLAQKYLDKE  332 (371)
Q Consensus       306 ~~~g~~~~~~~------~~~~~~~~~~~~~~g~  332 (371)
                      ++.|+++..+.      ..+.++++++++++|+
T Consensus       157 ~i~G~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk  189 (189)
T d1gu7a2         157 TSAGFWVTELLKNNKELKTSTLNQIIAWYEEGK  189 (189)
T ss_dssp             EEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred             EEEEEEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence            99998654332      1245778888888874

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.90  E-value=5.7e-24  Score=176.12  Aligned_cols=164  Identities=19%  Similarity=0.203  Sum_probs=133.7

Q ss_pred             CcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCC
Q 017457          157 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA  236 (371)
Q Consensus       157 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~  236 (371)
                      +.+.||.+.|++.|||+++ ++.++++|++|+|+|+|++|++++|+||++|+ +|++++++++|++.++++|+++++++.
T Consensus         2 p~e~AApl~cag~Ta~~al-~~~~~~~g~~vlI~GaG~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~a~~lGa~~~i~~~   79 (168)
T d1piwa2           2 PSHLAAPLLCGGLTVYSPL-VRNGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGADHYIATL   79 (168)
T ss_dssp             CHHHHGGGGTHHHHHHHHH-HHTTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEEGG
T ss_pred             CHHHHHHHHHHHHHHHHHH-HHhCcCCCCEEEEECCCCcchhHHHHhhhccc-cccccccchhHHHHhhccCCcEEeecc
Confidence            4567889999999999976 57899999999999999999999999999999 899999999999999999999999876


Q ss_pred             CCCCccHHHHHHHhhCCCcCEEEECCCChH--HHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeecc
Q 017457          237 TCGDKTVSQVIKEMTDGGADYCFECIGLTS--VMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFG  313 (371)
Q Consensus       237 ~~~~~~~~~~i~~~~~gg~d~vid~~g~~~--~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~  313 (371)
                      +  +.++.+    ...+++|+++||+++..  .++.++++++++ |+++.+|......  .++...++. ++++.|+..+
T Consensus        80 ~--~~~~~~----~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~~~--~~~~~~~~~k~~~i~Gs~~g  150 (168)
T d1piwa2          80 E--EGDWGE----KYFDTFDLIVVCASSLTDIDFNIMPKAMKVG-GRIVSISIPEQHE--MLSLKPYGLKAVSISYSALG  150 (168)
T ss_dssp             G--TSCHHH----HSCSCEEEEEECCSCSTTCCTTTGGGGEEEE-EEEEECCCCCSSC--CEEECGGGCBSCEEEECCCC
T ss_pred             c--hHHHHH----hhhcccceEEEEecCCccchHHHHHHHhhcc-ceEEEeccccccc--cccHHHHHhCCcEEEEEeeC
Confidence            5  133322    22348999999988643  367889999998 9999999754443  344444444 8999998655


Q ss_pred             CCCchhhHHHHHHHHHcCCCC
Q 017457          314 GLKPRSDIATLAQKYLDKELN  334 (371)
Q Consensus       314 ~~~~~~~~~~~~~~~~~g~~~  334 (371)
                      +   +++++++++++++|+++
T Consensus       151 ~---~~~~~e~l~li~~gkIk  168 (168)
T d1piwa2         151 S---IKELNQLLKLVSEKDIK  168 (168)
T ss_dssp             C---HHHHHHHHHHHHHTTCC
T ss_pred             C---HHHHHHHHHHHHhCCCC
Confidence            4   67899999999999763

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=1.8e-23  Score=176.14  Aligned_cols=172  Identities=19%  Similarity=0.217  Sum_probs=132.5

Q ss_pred             CCCcchhhccccchhhhHHHHHHHcCCCCC--CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCcc
Q 017457          155 HIPLGIACLLSCGVSTGVGAAWKVAGVEVG--STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGIT  230 (371)
Q Consensus       155 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g--~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~  230 (371)
                      +||+.+.| ++++++|||+++.+..++++|  ++|||+|+ |++|++++|+||.+|+++|+++++++++...+ +++|++
T Consensus         1 ~~~~~~ga-lg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad   79 (187)
T d1vj1a2           1 HLSYFLGA-IGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFD   79 (187)
T ss_dssp             CGGGGGTT-TSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCS
T ss_pred             CccHHHHH-hhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccce
Confidence            46667754 566899999999999999987  88999997 99999999999999997777777777666654 579999


Q ss_pred             eEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCC-----CceecC---HHHH-
Q 017457          231 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG-----SPISLN---SIEI-  301 (371)
Q Consensus       231 ~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-----~~~~~~---~~~~-  301 (371)
                      +++|+.+   +++.+.+++.++.|+|+|||++|++. ++.++++++++ |+++.+|..+..     .....+   ...+ 
T Consensus        80 ~vi~~~~---~~~~~~~~~~~~~GvDvv~D~vGg~~-~~~~~~~l~~~-G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~  154 (187)
T d1vj1a2          80 AAVNYKT---GNVAEQLREACPGGVDVYFDNVGGDI-SNTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPPAVEAIRK  154 (187)
T ss_dssp             EEEETTS---SCHHHHHHHHCTTCEEEEEESSCHHH-HHHHHTTEEEE-EEEEEC------------CCCCCHHHHHHHH
T ss_pred             EEeeccc---hhHHHHHHHHhccCceEEEecCCchh-HHHHhhhcccc-ccEEEeccccccccccccCCchHHHHHHHHH
Confidence            9999998   89999999998779999999999877 99999999998 999999863221     011111   1112 


Q ss_pred             hcCceEEEeeccCCCc--hhhHHHHHHHHHcCC
Q 017457          302 LKGRSVCGTYFGGLKP--RSDIATLAQKYLDKE  332 (371)
Q Consensus       302 ~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~g~  332 (371)
                      .+++++.|+.+.++..  .+.++++++++++|+
T Consensus       155 ~k~i~~~g~~~~~~~~~~~e~~~~l~~~i~~Gk  187 (187)
T d1vj1a2         155 ERNITRERFTVLNYKDKFEPGILQLSQWFKEGK  187 (187)
T ss_dssp             HTTCEEEECCGGGCGGGHHHHHHHHHHHHHHTS
T ss_pred             hcceEEEEeEecchHHHHHHHHHHHHHHHHCcC
Confidence            2378888876665542  345777888888874

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.89  E-value=3.4e-25  Score=182.19  Aligned_cols=142  Identities=18%  Similarity=0.179  Sum_probs=119.2

Q ss_pred             CCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccC
Q 017457            6 GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH   85 (371)
Q Consensus         6 ~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~   85 (371)
                      ...+++++++.|+|++|||||||+|++||++|++.+.|.++..+ ..|.++|+|++|+|++  +.++++++||+|.....
T Consensus        15 ~~~l~~~~v~~p~l~~~eVLVkV~a~gin~~D~~~~~g~~~~~~-~~~~~~g~e~~G~v~~--~~~~~~~~g~~v~~~~~   91 (162)
T d1tt7a1          15 DVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVR-EYPLILGIDAAGTVVS--SNDPRFAEGDEVIATSY   91 (162)
T ss_dssp             SCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCS-SCSEECCSEEEEEEEE--CSSTTCCTTCEEEEEST
T ss_pred             CeEEEEEEcCCCCCCCCEEEEEEEEecccchhhheeeecccccc-cceeeeeeeccccccc--ccccccccceeeEeeec
Confidence            44599999999999999999999999999999999999876543 7789999999999998  45678999999976543


Q ss_pred             CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccc
Q 017457           86 RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLS  165 (371)
Q Consensus        86 ~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~  165 (371)
                      .                        .|...+|                   +|+||+.+++++++++|+++|+++||.++
T Consensus        92 ~------------------------~g~~~~G-------------------~~aey~~v~~~~l~~iP~~ls~~~Aa~~~  128 (162)
T d1tt7a1          92 E------------------------LGVSRDG-------------------GLSEYASVPGDWLVPLPQNLSLKEAMVDQ  128 (162)
T ss_dssp             T------------------------BTTTBCC-------------------SSBSSEEECGGGEEECCTTCCHHHHHHSC
T ss_pred             c------------------------ceecccc-------------------ccceEEEecHHHEEECCCCCCHHHHHHHH
Confidence            1                        3444444                   99999999999999999999999999999


Q ss_pred             cchhhhHHHHHHHcCCCCCCeEEEEcC-Ch
Q 017457          166 CGVSTGVGAAWKVAGVEVGSTVAIFGL-GA  194 (371)
Q Consensus       166 ~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~  194 (371)
                      +.++|||.++. ..+...+++|||.|+ |+
T Consensus       129 ~~~~ta~~~~~-~~~~~~~~~Vli~ga~G~  157 (162)
T d1tt7a1         129 LLTIVDREVSL-EETPGALKDILQNRIQGR  157 (162)
T ss_dssp             STTSEEEEECS-TTHHHHHHHTTTTCCSSE
T ss_pred             HHHHHHHHHHH-hcCCCCCCEEEEECCcce
Confidence            99999998643 334555678888876 54

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=3e-23  Score=166.89  Aligned_cols=120  Identities=13%  Similarity=0.065  Sum_probs=103.9

Q ss_pred             CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457            8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD   87 (371)
Q Consensus         8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~   87 (371)
                      .+++++++.|+|++|||+|||+|++||++|.+...|.++... .+|.++|+|++|+|+++|..  .+++||+|.....  
T Consensus        14 ~l~i~~v~~p~~~~geVlVkV~a~gin~~D~~~~~G~~~~~~-~~p~v~G~e~~G~V~~~~~~--~~~~g~~v~~~~~--   88 (146)
T d1o89a1          14 LASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIR-NFPMIPGIDFAGTVRTSEDP--RFHAGQEVLLTGW--   88 (146)
T ss_dssp             EEEEEECCGGGSCSCSEEEEEEEEECCHHHHHHHHTCSSCCC-SSSBCCCSEEEEEEEEECST--TCCTTCEEEEECT--
T ss_pred             EEEEEEcCCCCCCCCEEEEEEeeccCccceeeEEEeeccccc-ccceeccccccccceeeccC--CccceeeEEeecc--
Confidence            378889999999999999999999999999999999876543 78999999999999998775  6999999976532  


Q ss_pred             CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccc
Q 017457           88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG  167 (371)
Q Consensus        88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~  167 (371)
                                            ..|...+|                   +|+||+.+++++++++|+++|+++||+++++
T Consensus        89 ----------------------~~g~~~~G-------------------~~Aey~~v~~~~vv~lP~~ls~~eAA~l~~a  127 (146)
T d1o89a1          89 ----------------------GVGENHWG-------------------GLAEQARVKGDWLVAMPQGQAAKEISLSEAP  127 (146)
T ss_dssp             ----------------------TBTTTBCC-------------------SSBSEEEECGGGCEECCTTSCCEEECGGGHH
T ss_pred             ----------------------cceecCCC-------------------cceeeeeeeeeeEEECCCCCCHHHHHHHHHH
Confidence                                  13444444                   9999999999999999999999999999988


Q ss_pred             hhhhHH
Q 017457          168 VSTGVG  173 (371)
Q Consensus       168 ~~ta~~  173 (371)
                      +.||+.
T Consensus       128 ~~tA~~  133 (146)
T d1o89a1         128 NFAEAI  133 (146)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            888754

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.87  E-value=2.7e-21  Score=163.28  Aligned_cols=166  Identities=27%  Similarity=0.276  Sum_probs=136.4

Q ss_pred             chhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCC
Q 017457          159 GIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATC  238 (371)
Q Consensus       159 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~  238 (371)
                      ++.++++..+.|||+++ +.+++++|++|||+|+|++|++++++|+++|+.+|++++++++|++.++++|+++++++.+ 
T Consensus         2 ~d~~~l~d~~~ta~~a~-~~a~v~~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~-   79 (195)
T d1kola2           2 RDLTCLSDILPTGYHGA-VTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLD-   79 (195)
T ss_dssp             HHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSS-
T ss_pred             chHHhcccHHHHHHHHH-HHhCCCCCCEEEEECcCHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEEeCCC-
Confidence            46677888999999985 6799999999999999999999999999999989999999999999999999999999888 


Q ss_pred             CCccHHHHHHHhhCC-CcCEEEECCCC---------------hHHHHHHHHHhhcCCceEEEECccCCCCc---------
Q 017457          239 GDKTVSQVIKEMTDG-GADYCFECIGL---------------TSVMNDAFNSSREGWGKTVILGVEMHGSP---------  293 (371)
Q Consensus       239 ~~~~~~~~i~~~~~g-g~d~vid~~g~---------------~~~~~~~~~~l~~~~G~~v~~g~~~~~~~---------  293 (371)
                        +++.+.+.++|++ ++|++||++|.               +..++.++++++++ |+++.+|.......         
T Consensus        80 --~~~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~g-G~v~~~G~~~~~~~~~~~~~~~~  156 (195)
T d1kola2          80 --TPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVA-GKIGIPGLYVTEDPGAVDAAAKI  156 (195)
T ss_dssp             --SCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEE-EEEEECSCCCSCCTTCSSHHHHT
T ss_pred             --cCHHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcC-CEEEEeeecCCCcccchhhhhhc
Confidence              8999999999998 99999999984               34699999999998 99999997543322         


Q ss_pred             --eecCHHHHhc-CceEEEeeccCCCchhhHHHHHHHHHcCC
Q 017457          294 --ISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKE  332 (371)
Q Consensus       294 --~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~g~  332 (371)
                        .++++..++. ++++.+   +....+..++++++++.+++
T Consensus       157 ~~~~~~~~~~~~k~~~i~~---g~~~v~~~~~~Ll~~I~~~k  195 (195)
T d1kola2         157 GSLSIRFGLGWAKSHSFHT---GQTPVMKYNRALMQAIMWDR  195 (195)
T ss_dssp             TCCCCCHHHHHHTTCEEEE---SSCCHHHHHHHHHHHHHTTS
T ss_pred             CceeeeHHHHHhhcceecc---CCCchHHHHHHHHHHHHcCC
Confidence              2344444443 666653   23333455678888887764

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.86  E-value=4.8e-24  Score=177.89  Aligned_cols=144  Identities=15%  Similarity=0.058  Sum_probs=116.9

Q ss_pred             cEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCC--------CCCCccccccccEEEEEeCCCCCCcCCCCEE
Q 017457            9 LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPK--------LPLPVIFGHEAVGVVESVGEYVEEVKERDLV   80 (371)
Q Consensus         9 l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~--------~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V   80 (371)
                      ++..++|.|+|+++||||||++++||++|++.++|.++...        ..+|.++|+|++|+|+++|..++.++.||+|
T Consensus        21 l~~~~~p~p~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~~g~V~~~~~~~~~~~~g~~v  100 (175)
T d1gu7a1          21 TQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWV  100 (175)
T ss_dssp             EEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCEEEEEEECTTCCSCCTTCEE
T ss_pred             EEEEECCCCCCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCcccccccccccccccccccccccccce
Confidence            34456777788999999999999999999999988753321        2677899999999999999999999999999


Q ss_pred             eeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcch
Q 017457           81 LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI  160 (371)
Q Consensus        81 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~  160 (371)
                      .....                             .                   .|+|+||+.+++++++++|++++.+.
T Consensus       101 ~~~~~-----------------------------~-------------------~g~~aey~~v~~~~~~~iP~~~~~~~  132 (175)
T d1gu7a1         101 IPSHV-----------------------------N-------------------FGTWRTHALGNDDDFIKLPNPAQSKA  132 (175)
T ss_dssp             EESSS-----------------------------C-------------------CCCSBSEEEEEGGGEEEECCHHHHHH
T ss_pred             ecccc-----------------------------c-------------------cccccceeeehhhhccCCCccchhhh
Confidence            65322                             1                   14899999999999999999876444


Q ss_pred             hhccccchhhhHHHHHH-HcCCCCCCeEEEEc-C-ChHHHHHHHH
Q 017457          161 ACLLSCGVSTGVGAAWK-VAGVEVGSTVAIFG-L-GAVGLAVAEG  202 (371)
Q Consensus       161 aa~~~~~~~ta~~~l~~-~~~~~~g~~VLI~G-~-g~~G~~ai~l  202 (371)
                      +  +.+..+|||+++.. ..++++|++|||.| + |++|++++|+
T Consensus       133 a--~~~~~~ta~~~l~~~~~~~~~g~~vli~gaa~~gvG~~~iQ~  175 (175)
T d1gu7a1         133 N--GKPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY  175 (175)
T ss_dssp             T--TCSCCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             h--ccchHHHHHHHHHHHhcCCCCCCEEEEECccchhhhheEEeC
Confidence            4  45678889887654 46799999999997 4 7799988763

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=2.9e-22  Score=166.24  Aligned_cols=148  Identities=11%  Similarity=0.097  Sum_probs=121.1

Q ss_pred             CCcchhhccccchhhhHHHHHH---HcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcce
Q 017457          156 IPLGIACLLSCGVSTGVGAAWK---VAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD  231 (371)
Q Consensus       156 l~~~~aa~~~~~~~ta~~~l~~---~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~  231 (371)
                      ||+.+||.++++++|||++++.   .....++++|||+|+ |++|++++|+||++|+ +||++++++++.+.++++|+++
T Consensus         1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga-~Via~~~~~~k~~~~~~lGad~   79 (177)
T d1o89a2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGASR   79 (177)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTEEE
T ss_pred             CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCC-CeEEEecchhHHHHHHhhcccc
Confidence            6889999999999999987542   233455679999987 9999999999999999 8999999999999999999999


Q ss_pred             EEcCCCCCCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEe
Q 017457          232 FINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGT  310 (371)
Q Consensus       232 v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~  310 (371)
                      ++|+++   .++.+   .+.....|.++|++++.. +...+++++++ |+++.+|.. ++...+++...++. ++++.|+
T Consensus        80 vi~~~~---~~~~~---~l~~~~~~~vvD~Vgg~~-~~~~l~~l~~~-Griv~~G~~-~~~~~~~~~~~~~~k~~~i~G~  150 (177)
T d1o89a2          80 VLPRDE---FAESR---PLEKQVWAGAIDTVGDKV-LAKVLAQMNYG-GCVAACGLA-GGFTLPTTVMPFILRNVRLQGV  150 (177)
T ss_dssp             EEEGGG---SSSCC---SSCCCCEEEEEESSCHHH-HHHHHHTEEEE-EEEEECCCT-TCSCCCCCSHHHHHHCCEEEEC
T ss_pred             cccccc---HHHHH---HHHhhcCCeeEEEcchHH-HHHHHHHhccc-cceEeeccc-CCccccccHHHHHHCCCeEEEE
Confidence            999876   34322   223336799999999987 99999999998 999999974 34455666666554 9999997


Q ss_pred             ecc
Q 017457          311 YFG  313 (371)
Q Consensus       311 ~~~  313 (371)
                      +..
T Consensus       151 ~~~  153 (177)
T d1o89a2         151 DSV  153 (177)
T ss_dssp             CSS
T ss_pred             ecc
Confidence            544

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.84  E-value=7.9e-22  Score=162.03  Aligned_cols=154  Identities=14%  Similarity=0.098  Sum_probs=118.9

Q ss_pred             cchhhhHHH---HHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCc
Q 017457          166 CGVSTGVGA---AWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK  241 (371)
Q Consensus       166 ~~~~ta~~~---l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~  241 (371)
                      ++++|||.+   |.+....+++++|||+|+ |++|++++|+||++|+ +||+++++++|.++++++|+++++++++    
T Consensus         3 ~aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~~~~lGad~vi~~~~----   77 (167)
T d1tt7a2           3 TAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLGASEVISRED----   77 (167)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHTCSEEEEHHH----
T ss_pred             ChHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCC-ceEEEecCHHHHHHHHhhcccceEeccc----
Confidence            356677644   444556778889999987 9999999999999999 9999999999999999999999998654    


Q ss_pred             cHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchh
Q 017457          242 TVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRS  319 (371)
Q Consensus       242 ~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~  319 (371)
                       +.....+.+.+ ++|+|||++|+.. ++.++++++++ |+++.+|.. .+...+++...++. ++++.|...... +.+
T Consensus        78 -~~~~~~~~~~~~gvd~vid~vgg~~-~~~~~~~l~~~-G~iv~~G~~-~g~~~~~~~~~l~~k~~~i~G~~~~~~-~~~  152 (167)
T d1tt7a2          78 -VYDGTLKALSKQQWQGAVDPVGGKQ-LASLLSKIQYG-GSVAVSGLT-GGGEVPATVYPFILRGVSLLGIDSVYC-PMD  152 (167)
T ss_dssp             -HCSSCCCSSCCCCEEEEEESCCTHH-HHHHHTTEEEE-EEEEECCCS-SCSCEEECSHHHHTSCCEEEECCSSSC-CHH
T ss_pred             -hhchhhhcccCCCceEEEecCcHHH-HHHHHHHhccC-ceEEEeecc-CCCcccCCHHHHHHCCcEEEEEecCCC-CHH
Confidence             11112233344 9999999999988 99999999998 999999984 44567777776666 999999753332 244


Q ss_pred             hHHHHHHHHH
Q 017457          320 DIATLAQKYL  329 (371)
Q Consensus       320 ~~~~~~~~~~  329 (371)
                      ...++++.+.
T Consensus       153 ~~~~~~~~l~  162 (167)
T d1tt7a2         153 VRAAVWERMS  162 (167)
T ss_dssp             HHHHHHHHTT
T ss_pred             HHHHHHHHHH
Confidence            4555655553

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.51  E-value=6.8e-15  Score=102.69  Aligned_cols=73  Identities=14%  Similarity=0.100  Sum_probs=66.1

Q ss_pred             CCcchhhccccchhhhHHHHHH---HcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCc
Q 017457          156 IPLGIACLLSCGVSTGVGAAWK---VAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI  229 (371)
Q Consensus       156 l~~~~aa~~~~~~~ta~~~l~~---~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga  229 (371)
                      +|++||+.+++++.|||.+++.   ....+++++|||+|+ |++|.+++|++|.+|+ +|+++.+++++.++++++|+
T Consensus         1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~-~Vi~~t~s~~k~~~~~~lGA   77 (77)
T d1o8ca2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGA   77 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHHCCC
Confidence            6889999999999999987653   355789999999987 9999999999999999 89999999999999999985

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.51  E-value=7e-14  Score=111.03  Aligned_cols=120  Identities=16%  Similarity=0.108  Sum_probs=88.4

Q ss_pred             CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457            8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD   87 (371)
Q Consensus         8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~   87 (371)
                      .|++++.++|+|++||||||++|.++++..   +....+.   ....++..+.+|+|++  |+.++|++||+|...    
T Consensus        21 ~f~l~e~~ip~~~~gevLvk~~~~svDp~~---R~~~~~~---~~g~~~~g~~vg~Vv~--S~~~~f~~GD~V~g~----   88 (147)
T d1v3va1          21 DFELKTVELPPLKNGEVLLEALFLSVDPYM---RIASKRL---KEGAVMMGQQVARVVE--SKNSAFPAGSIVLAQ----   88 (147)
T ss_dssp             GEEEEEEECCCCCTTCEEEEEEEEECCTHH---HHHGGGS---CTTSBCCCCEEEEEEE--ESCTTSCTTCEEEEC----
T ss_pred             ceEEEEEECCCCCCCEEEEEEEEEeEcccc---ccccccc---ccCCccccceEEEEEE--eCCCcccCCCEEEEc----
Confidence            389999999999999999999999997642   2222111   2223455688999988  677889999999542    


Q ss_pred             CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCC-----Ccchhh
Q 017457           88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI-----PLGIAC  162 (371)
Q Consensus        88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l-----~~~~aa  162 (371)
                                                                      ++|+||.+++.+.+.++|+++     +....+
T Consensus        89 ------------------------------------------------~gw~ey~v~~~~~l~kv~~~~~~~~~~~~~~~  120 (147)
T d1v3va1          89 ------------------------------------------------SGWTTHFISDGKGLEKLLTEWPDKKIQYHEHV  120 (147)
T ss_dssp             ------------------------------------------------CCSBSEEEECSSSCEECCTTCCTTSSCCCEEE
T ss_pred             ------------------------------------------------cCCEeEEEeccceeeEccccccccccchhhhH
Confidence                                                            379999999999999998654     344455


Q ss_pred             ccccchhhh-HHHHHHHcCCCCCCeEEE
Q 017457          163 LLSCGVSTG-VGAAWKVAGVEVGSTVAI  189 (371)
Q Consensus       163 ~~~~~~~ta-~~~l~~~~~~~~g~~VLI  189 (371)
                      ++....+|| |..+  ....+.|++||+
T Consensus       121 ~lG~~Gmtaay~gl--~~~~k~Getvv~  146 (147)
T d1v3va1         121 TKGFENMPAAFIEM--LNGANLGKAVVT  146 (147)
T ss_dssp             EECGGGHHHHHHHH--HTTCCSSEEEEE
T ss_pred             hccccchHHHHHHh--hCCCCCCCEEEe
Confidence            666677775 4344  344577999986

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=98.15  E-value=4.8e-06  Score=65.67  Aligned_cols=99  Identities=21%  Similarity=0.221  Sum_probs=74.5

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcc--eEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT--DFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~--~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      +..+|+|+|+|..|+.|++.|+.+|+ .|.+.+.+.+++++++.....  .....++   +.+.+.+.     .+|+||.
T Consensus        31 ~pa~V~ViGaGvaG~~A~~~A~~lGA-~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~---~~l~~~~~-----~aDivI~  101 (168)
T d1pjca1          31 KPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNS---AEIETAVA-----EADLLIG  101 (168)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCH---HHHHHHHH-----TCSEEEE
T ss_pred             CCcEEEEECCChHHHHHHHHHhhCCC-EEEEEeCcHHHHHHHHHhhcccceeehhhh---hhHHHhhc-----cCcEEEE
Confidence            46789999999999999999999999 999999999999998885432  2222222   23333332     6899998


Q ss_pred             CCCCh------HHHHHHHHHhhcCCceEEEECccCCC
Q 017457          261 CIGLT------SVMNDAFNSSREGWGKTVILGVEMHG  291 (371)
Q Consensus       261 ~~g~~------~~~~~~~~~l~~~~G~~v~~g~~~~~  291 (371)
                      ++=-+      ...+..++.|+++ ..+++++...++
T Consensus       102 aalipG~~aP~lIt~~mv~~Mk~G-SVIVDvaidqGG  137 (168)
T d1pjca1         102 AVLVPGRRAPILVPASLVEQMRTG-SVIVDVAVDQGG  137 (168)
T ss_dssp             CCCCTTSSCCCCBCHHHHTTSCTT-CEEEETTCTTCC
T ss_pred             eeecCCcccCeeecHHHHhhcCCC-cEEEEeecCCCC
Confidence            75421      1357899999998 999999875443

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=98.13  E-value=7.6e-06  Score=65.43  Aligned_cols=106  Identities=17%  Similarity=0.205  Sum_probs=76.0

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEc-CCC---C-------------CCccHHH
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN-PAT---C-------------GDKTVSQ  245 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~-~~~---~-------------~~~~~~~  245 (371)
                      +..+|+|+|+|..|+.|+..|+.+|+ +|.+.+.+.++++++++++...+-- ...   .             ......+
T Consensus        28 ~pa~VvViGaGvaG~~Aa~~A~~lGA-~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          28 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCcEEEEEcCcHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence            45689999999999999999999999 9999999999999999998754411 000   0             0011222


Q ss_pred             HHHHhhCCCcCEEEECCCCh------HHHHHHHHHhhcCCceEEEECccCCC
Q 017457          246 VIKEMTDGGADYCFECIGLT------SVMNDAFNSSREGWGKTVILGVEMHG  291 (371)
Q Consensus       246 ~i~~~~~gg~d~vid~~g~~------~~~~~~~~~l~~~~G~~v~~g~~~~~  291 (371)
                      .+.+... ..|+||-++--+      ..-+.+++.|+++ +.+++++...++
T Consensus       107 ~l~~~l~-~aDlVI~talipG~~aP~lit~~mv~~Mk~G-SVIVDvaidqGG  156 (183)
T d1l7da1         107 AVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPG-SVIIDLAVEAGG  156 (183)
T ss_dssp             HHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTT-CEEEETTGGGTC
T ss_pred             HHHHHHH-hhhhheeeeecCCcccceeehHHHHHhcCCC-cEEEEEeecCCC
Confidence            3333222 689999764321      1357899999998 999999875443

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.80  E-value=9.5e-05  Score=63.01  Aligned_cols=105  Identities=16%  Similarity=0.146  Sum_probs=71.5

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCcceEEcCCCCCCcc-HHHHHHHhhC--CCcCE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDFINPATCGDKT-VSQVIKEMTD--GGADY  257 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~~v~~~~~~~~~~-~~~~i~~~~~--gg~d~  257 (371)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++...+.-.-+..+++ ..+.+.....  |.+|+
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDi   83 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCe
Confidence            6899999997 9999999999999999 999999999887765 446654332111111122 2222222222  37899


Q ss_pred             EEECCCCh-------------------------HHHHHHHHHhhcCCceEEEECcc
Q 017457          258 CFECIGLT-------------------------SVMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       258 vid~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      ++++.|..                         ...+.+++.|+..+|+++.++..
T Consensus        84 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~  139 (253)
T d1hxha_          84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASV  139 (253)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCG
T ss_pred             EEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccch
Confidence            99998851                         13566677776544999999864

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.79  E-value=7.6e-05  Score=59.36  Aligned_cols=74  Identities=16%  Similarity=0.117  Sum_probs=57.0

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcceEEcCCCCCCccHHHHHHHhhCC
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDG  253 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~g  253 (371)
                      +.+.-.+.++++|||+|+|+.+.+++.-++..|+++|.++.++.++.+.+.+ ++... ++...              ..
T Consensus         8 ~l~~~~~~~~~~vlIlGaGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~-~~~~~--------------~~   72 (167)
T d1npya1           8 LIEKYHLNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAY-INSLE--------------NQ   72 (167)
T ss_dssp             HHHHTTCCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEE-ESCCT--------------TC
T ss_pred             HHHHcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhh-hhccc--------------cc
Confidence            3455666788999999999999999999999999899999999998877654 55433 22211              12


Q ss_pred             CcCEEEECCC
Q 017457          254 GADYCFECIG  263 (371)
Q Consensus       254 g~d~vid~~g  263 (371)
                      .+|+++||++
T Consensus        73 ~~DliINaTp   82 (167)
T d1npya1          73 QADILVNVTS   82 (167)
T ss_dssp             CCSEEEECSS
T ss_pred             chhhheeccc
Confidence            6899999977

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=0.00011  Score=62.36  Aligned_cols=102  Identities=16%  Similarity=0.186  Sum_probs=69.9

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcc-eEE--cCCCCCCccHHHHHHHhhC--CCcC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-DFI--NPATCGDKTVSQVIKEMTD--GGAD  256 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~-~v~--~~~~~~~~~~~~~i~~~~~--gg~d  256 (371)
                      +|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+.+.... ..+  |-.+  .++..+.+.+...  |++|
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~--~~~v~~~~~~~~~~~g~iD   81 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQ--EDDVKTLVSETIRRFGRLD   81 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTS--HHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEccCCC--HHHHHHHHHHHHHhcCCCC
Confidence            6899999998 9999999999999999 999999999988877654322 222  3222  1222222222222  3799


Q ss_pred             EEEECCCCh--------------------------HHHHHHHHHhhcCCceEEEECc
Q 017457          257 YCFECIGLT--------------------------SVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       257 ~vid~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      +++++.|..                          ...+.+++.|+.++|+++.++.
T Consensus        82 ilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS  138 (250)
T d1ydea1          82 CVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISS  138 (250)
T ss_dssp             EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECC
T ss_pred             EEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCccccc
Confidence            999988731                          0345666677664489999885

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=97.73  E-value=0.00014  Score=61.77  Aligned_cols=106  Identities=20%  Similarity=0.247  Sum_probs=73.8

Q ss_pred             CCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceE-EcCCCCCCccHHHHHHHhhC--CCcC
Q 017457          181 VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMTD--GGAD  256 (371)
Q Consensus       181 ~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~--gg~d  256 (371)
                      .-+|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+++.+...+ .|-.+  .++..+.+.+...  |++|
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~G~iD   78 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGGAFFQVDLED--ERERVRFVEEAAYALGRVD   78 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTCEEEECCTTC--HHHHHHHHHHHHHHHSCCC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeEEEEeCCC--HHHHHHHHHHHHHhcCCCC
Confidence            347999999997 9999999999999999 99999999998888888776543 23222  1222222332222  3799


Q ss_pred             EEEECCCCh-------------------------HHHHHHHHHhhc-CCceEEEECccC
Q 017457          257 YCFECIGLT-------------------------SVMNDAFNSSRE-GWGKTVILGVEM  289 (371)
Q Consensus       257 ~vid~~g~~-------------------------~~~~~~~~~l~~-~~G~~v~~g~~~  289 (371)
                      +++++.|..                         ...+.+++.|.. ++|+++.++...
T Consensus        79 iLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~  137 (248)
T d2d1ya1          79 VLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQ  137 (248)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGG
T ss_pred             eEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccc
Confidence            999988741                         134566667754 238999988643

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.64  E-value=0.0002  Score=56.30  Aligned_cols=81  Identities=15%  Similarity=0.165  Sum_probs=59.9

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHH-HHHHhCcceEEcCCCCCCccHHHHHHHhhCC
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFE-IGKKFGITDFINPATCGDKTVSQVIKEMTDG  253 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~-~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g  253 (371)
                      +.+..+--.+++|||+|+|.+|.+.+..+...|+++++++.++.++.+ .++++|.. +.+.     .++.+.+.     
T Consensus        15 a~~~~~~l~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~-~~~~-----~~~~~~l~-----   83 (159)
T d1gpja2          15 AERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRF-----DELVDHLA-----   83 (159)
T ss_dssp             HHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCG-----GGHHHHHH-----
T ss_pred             HHHHhCCcccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc-cccc-----hhHHHHhc-----
Confidence            334444457899999999999999999999999988999999987765 45667753 3333     23444333     


Q ss_pred             CcCEEEECCCChH
Q 017457          254 GADYCFECIGLTS  266 (371)
Q Consensus       254 g~d~vid~~g~~~  266 (371)
                      .+|+||.|++.+.
T Consensus        84 ~~Divi~atss~~   96 (159)
T d1gpja2          84 RSDVVVSATAAPH   96 (159)
T ss_dssp             TCSEEEECCSSSS
T ss_pred             cCCEEEEecCCCC
Confidence            6999999998653

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=97.62  E-value=0.0002  Score=60.53  Aligned_cols=102  Identities=19%  Similarity=0.322  Sum_probs=69.4

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhCcc---eEEcCCCCCCccHHHHHHHhhC--CCc
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGIT---DFINPATCGDKTVSQVIKEMTD--GGA  255 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga~---~v~~~~~~~~~~~~~~i~~~~~--gg~  255 (371)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +++..   ...|-.+  .++..+.+.+...  |+.
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~i   79 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGA-KVIGTATSENGAQAISDYLGANGKGLMLNVTD--PASIESVLEKIRAEFGEV   79 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTC--HHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCCcEEEEEecC--HHHhhhhhhhhhcccCCc
Confidence            5899999998 9999999999999999 9999999998877654 35543   2233222  1223333333322  379


Q ss_pred             CEEEECCCCh-------------------------HHHHHHHHHhhc-CCceEEEECc
Q 017457          256 DYCFECIGLT-------------------------SVMNDAFNSSRE-GWGKTVILGV  287 (371)
Q Consensus       256 d~vid~~g~~-------------------------~~~~~~~~~l~~-~~G~~v~~g~  287 (371)
                      |+++++.|..                         ...+.+++.|.. ++|+++.++.
T Consensus        80 DilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS  137 (243)
T d1q7ba_          80 DILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGS  137 (243)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             ceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecc
Confidence            9999988741                         134566666633 2389999985

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.50  E-value=0.00063  Score=55.06  Aligned_cols=77  Identities=17%  Similarity=0.223  Sum_probs=56.0

Q ss_pred             CCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hC----c-ceEEcCCCCCCccHHHHHHHhhC
Q 017457          180 GVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FG----I-TDFINPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       180 ~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lg----a-~~v~~~~~~~~~~~~~~i~~~~~  252 (371)
                      .--+|+++||+|+ |++|.+.+..+...|+ +|++++++.++.+.+.+ +.    . ....|..+      .+.+.+..+
T Consensus        19 ~~l~gK~vlItGasgGIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~------~~~~~~~~~   91 (191)
T d1luaa1          19 GSVKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETAD------DASRAEAVK   91 (191)
T ss_dssp             SCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCS------HHHHHHHTT
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHhhcc-chhhcccchHHHHHHHHHHHhccchhhhhhhccc------HHHHHHHhc
Confidence            3458999999997 9999999999999999 99999999988776543 21    1 12233322      233444443


Q ss_pred             CCcCEEEECCCC
Q 017457          253 GGADYCFECIGL  264 (371)
Q Consensus       253 gg~d~vid~~g~  264 (371)
                       ++|++|++.|.
T Consensus        92 -~iDilin~Ag~  102 (191)
T d1luaa1          92 -GAHFVFTAGAI  102 (191)
T ss_dssp             -TCSEEEECCCT
T ss_pred             -CcCeeeecCcc
Confidence             79999999774

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=97.48  E-value=0.00056  Score=58.28  Aligned_cols=79  Identities=23%  Similarity=0.358  Sum_probs=54.1

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcce-E--EcCCCCCCccHHHHHHHhhC--
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITD-F--INPATCGDKTVSQVIKEMTD--  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~-v--~~~~~~~~~~~~~~i~~~~~--  252 (371)
                      +|+++||+|+ +++|.+.+..+...|+ +|+++++++++.+.+.+    .|.+. .  .|-.+  .++..+.+.....  
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~~   80 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTS--EEAVIGTVDSVVRDF   80 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence            6899999998 9999999999999999 99999999988776533    34332 1  23222  1222233332222  


Q ss_pred             CCcCEEEECCCC
Q 017457          253 GGADYCFECIGL  264 (371)
Q Consensus       253 gg~d~vid~~g~  264 (371)
                      |++|+++++.|.
T Consensus        81 g~iDilVnnaG~   92 (260)
T d1zema1          81 GKIDFLFNNAGY   92 (260)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCeehhhhcc
Confidence            379999998773

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.47  E-value=0.00061  Score=57.74  Aligned_cols=102  Identities=19%  Similarity=0.330  Sum_probs=68.1

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-----HHhCcce-EE--cCCCCCCccHHHHHHHhhC-
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-----KKFGITD-FI--NPATCGDKTVSQVIKEMTD-  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-----~~lga~~-v~--~~~~~~~~~~~~~i~~~~~-  252 (371)
                      +|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+     ++.|.+. .+  |-.+  ..+..+.+.+... 
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~   80 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSN--YEEVKKLLEAVKEK   80 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCC--HHHHHHHHHHHHHH
Confidence            5899999998 9999999999999999 999999998876543     2345432 22  3222  1222222222222 


Q ss_pred             -CCcCEEEECCCCh-------------------------HHHHHHHHHhhc-CCceEEEECc
Q 017457          253 -GGADYCFECIGLT-------------------------SVMNDAFNSSRE-GWGKTVILGV  287 (371)
Q Consensus       253 -gg~d~vid~~g~~-------------------------~~~~~~~~~l~~-~~G~~v~~g~  287 (371)
                       |++|+++++.|..                         ...+.+++.|.. ++|+++.++.
T Consensus        81 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S  142 (251)
T d1vl8a_          81 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGS  142 (251)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECC
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccccccccccccc
Confidence             3799999998851                         135666777754 2279998875

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.43  E-value=0.00027  Score=59.66  Aligned_cols=79  Identities=20%  Similarity=0.249  Sum_probs=56.0

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcceE-EcCCCCCCccHHHHHHHhhC--CCcCE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDF-INPATCGDKTVSQVIKEMTD--GGADY  257 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v-~~~~~~~~~~~~~~i~~~~~--gg~d~  257 (371)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+ +++..+ .|-.+  .++..+.+.+...  |++|+
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~iDi   80 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGAHPVVMDVAD--PASVERGFAEALAHLGRLDG   80 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTCEEEECCTTC--HHHHHHHHHHHHHHHSSCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCeEEEEecCC--HHHHHHHHHHHHHhcCCceE
Confidence            5899999998 9999999999999999 99999999988877644 555433 23222  1222222222222  37999


Q ss_pred             EEECCCC
Q 017457          258 CFECIGL  264 (371)
Q Consensus       258 vid~~g~  264 (371)
                      ++++.|.
T Consensus        81 lVnnAG~   87 (242)
T d1ulsa_          81 VVHYAGI   87 (242)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9998875

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=97.41  E-value=4.6e-05  Score=63.17  Aligned_cols=111  Identities=16%  Similarity=0.209  Sum_probs=74.4

Q ss_pred             cccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HHhCcceEEcCCCCC
Q 017457          164 LSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITDFINPATCG  239 (371)
Q Consensus       164 ~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~~v~~~~~~~  239 (371)
                      ++.+...|.  +.+..++++|++||.+|+|. |..++.+|+..|. +|+.++.+++-.+.+    +++|.+.+.-...  
T Consensus        61 is~P~~~a~--ml~~L~l~~g~~VLeIGsGs-GY~taila~l~g~-~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~g--  134 (215)
T d1jg1a_          61 VSAPHMVAI--MLEIANLKPGMNILEVGTGS-GWNAALISEIVKT-DVYTIERIPELVEFAKRNLERAGVKNVHVILG--  134 (215)
T ss_dssp             ECCHHHHHH--HHHHHTCCTTCCEEEECCTT-SHHHHHHHHHHCS-CEEEEESCHHHHHHHHHHHHHTTCCSEEEEES--
T ss_pred             hhhhhhHHH--HHHhhccCccceEEEecCCC-ChhHHHHHHhhCc-eeEEEeccHHHHHHHHHHHHHcCCceeEEEEC--
Confidence            333444443  45678899999999999876 8888889988886 899999887654444    4567654432211  


Q ss_pred             CccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEE
Q 017457          240 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL  285 (371)
Q Consensus       240 ~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~  285 (371)
                        +..+-  ....+.||.++-..+-......+++.|+++ |+++..
T Consensus       135 --d~~~g--~~~~~pfD~Iiv~~a~~~ip~~l~~qL~~g-GrLv~p  175 (215)
T d1jg1a_         135 --DGSKG--FPPKAPYDVIIVTAGAPKIPEPLIEQLKIG-GKLIIP  175 (215)
T ss_dssp             --CGGGC--CGGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             --ccccC--CcccCcceeEEeecccccCCHHHHHhcCCC-CEEEEE
Confidence              11100  011237999987666555467889999998 998874

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.41  E-value=0.00039  Score=59.58  Aligned_cols=107  Identities=15%  Similarity=0.113  Sum_probs=68.2

Q ss_pred             CCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-----hCcc-eEEcCCCCCCccHHHHHHHhh--
Q 017457          181 VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-----FGIT-DFINPATCGDKTVSQVIKEMT--  251 (371)
Q Consensus       181 ~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-----lga~-~v~~~~~~~~~~~~~~i~~~~--  251 (371)
                      +-+|+++||+|+ +++|.+.+..+...|+ +|+.+++++++++.+.+     .+.. ..+..+. .+....+.+.+..  
T Consensus        11 ~L~GK~alITGassGIG~aiA~~la~~G~-~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~~~~~~   88 (269)
T d1xu9a_          11 MLQGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTM-EDMTFAEQFVAQAGK   88 (269)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCT-TCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhhhhcccchhhhhhh-hhHHHHHHHHHHHHH
Confidence            357899999998 9999999998888999 99999999998877643     2322 2222221 1122222222221  


Q ss_pred             -CCCcCEEEECCCCh-------------------------HHHHHHHHHhhcCCceEEEECccC
Q 017457          252 -DGGADYCFECIGLT-------------------------SVMNDAFNSSREGWGKTVILGVEM  289 (371)
Q Consensus       252 -~gg~d~vid~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~~  289 (371)
                       .+..|+++++.|..                         ...+.++..|+.++|+++.++...
T Consensus        89 ~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~  152 (269)
T d1xu9a_          89 LMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLA  152 (269)
T ss_dssp             HHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGG
T ss_pred             HhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccch
Confidence             23789998876641                         124455556655338988887643

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.40  E-value=0.0013  Score=48.12  Aligned_cols=93  Identities=9%  Similarity=-0.063  Sum_probs=63.6

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh--HHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE--KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~--~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      .|++|||+|+|.+|..-++.+...|+ +|++++....  -.+++++-... ... +.+...++         .++++|+.
T Consensus        11 ~~k~vlVvG~G~va~~ka~~ll~~ga-~v~v~~~~~~~~~~~~~~~~~i~-~~~-~~~~~~dl---------~~~~lv~~   78 (113)
T d1pjqa1          11 RDRDCLIVGGGDVAERKARLLLEAGA-RLTVNALTFIPQFTVWANEGMLT-LVE-GPFDETLL---------DSCWLAIA   78 (113)
T ss_dssp             BTCEEEEECCSHHHHHHHHHHHHTTB-EEEEEESSCCHHHHHHHTTTSCE-EEE-SSCCGGGG---------TTCSEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeccCChHHHHHHhcCCce-eec-cCCCHHHh---------CCCcEEee
Confidence            57899999999999999999999999 8888765432  23333322222 222 11111222         16899999


Q ss_pred             CCCChHHHHHHHHHhhcCCceEEEECcc
Q 017457          261 CIGLTSVMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      ++++...-..+.+..++. |.++.....
T Consensus        79 at~d~~~n~~i~~~a~~~-~ilVNv~D~  105 (113)
T d1pjqa1          79 ATDDDTVNQRVSDAAESR-RIFCNVVDA  105 (113)
T ss_dssp             CCSCHHHHHHHHHHHHHT-TCEEEETTC
T ss_pred             cCCCHHHHHHHHHHHHHc-CCEEEeCCC
Confidence            999888445777788886 988887653

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.38  E-value=0.00039  Score=58.73  Aligned_cols=78  Identities=10%  Similarity=0.141  Sum_probs=55.5

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcce--EEcCCCCCCccHHHHHHHhhCCCcCE
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITD--FINPATCGDKTVSQVIKEMTDGGADY  257 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~--v~~~~~~~~~~~~~~i~~~~~gg~d~  257 (371)
                      -+|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+.+ ++...  .+|-.+   .+-.+.+.+.. +.+|+
T Consensus         5 L~GK~~lITGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d---~~~v~~~~~~~-g~iDi   79 (244)
T d1pr9a_           5 LAGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDLGD---WEATERALGSV-GPVDL   79 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTC---HHHHHHHHTTC-CCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeCCC---HHHHHHHHHHh-CCceE
Confidence            37899999998 9999999999999999 99999999998876544 44322  233322   33333332222 27999


Q ss_pred             EEECCCC
Q 017457          258 CFECIGL  264 (371)
Q Consensus       258 vid~~g~  264 (371)
                      ++++.|.
T Consensus        80 lVnnAg~   86 (244)
T d1pr9a_          80 LVNNAAV   86 (244)
T ss_dssp             EEECCCC
T ss_pred             EEecccc
Confidence            9998875

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.37  E-value=0.001  Score=56.50  Aligned_cols=103  Identities=17%  Similarity=0.153  Sum_probs=66.1

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc---eEEcCCCCCCccHHHHH---HHhh
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVI---KEMT  251 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~---~v~~~~~~~~~~~~~~i---~~~~  251 (371)
                      +|+++||+|+ +++|.+.+..+...|+ +|+.+++++++.+.+.+    .+..   ...|-.+  .++..+.+   .+..
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~   83 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASL--RPEREKLMQTVSSMF   83 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCC--HHHHHHHHHHHHHHh
Confidence            5899999998 9999999999999999 99999999888766532    2322   1223222  12222222   2223


Q ss_pred             CCCcCEEEECCCChH-------------------------HHHHHHHHhhc-CCceEEEECcc
Q 017457          252 DGGADYCFECIGLTS-------------------------VMNDAFNSSRE-GWGKTVILGVE  288 (371)
Q Consensus       252 ~gg~d~vid~~g~~~-------------------------~~~~~~~~l~~-~~G~~v~~g~~  288 (371)
                      +|.+|+++++.|...                         ..+.+++.|.. ++|+++.++..
T Consensus        84 ~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~  146 (259)
T d1xq1a_          84 GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSI  146 (259)
T ss_dssp             TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC--
T ss_pred             CCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccc
Confidence            446999999888521                         23455555543 23899998763

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.37  E-value=0.00042  Score=58.44  Aligned_cols=75  Identities=13%  Similarity=0.131  Sum_probs=54.3

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCc-ceE-EcCCCCCCccHHHHHHHhhCC--CcC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGI-TDF-INPATCGDKTVSQVIKEMTDG--GAD  256 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga-~~v-~~~~~~~~~~~~~~i~~~~~g--g~d  256 (371)
                      +|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+.+ ++. ..+ .|-.+   .+   .+++....  ++|
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~---~~---~v~~~~~~~g~iD   76 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVDLGD---WD---ATEKALGGIGPVD   76 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTC---HH---HHHHHHTTCCCCS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeCCC---HH---HHHHHHHHcCCCe
Confidence            5899999998 9999999999999999 99999999988776544 332 222 23222   33   23333333  799


Q ss_pred             EEEECCCC
Q 017457          257 YCFECIGL  264 (371)
Q Consensus       257 ~vid~~g~  264 (371)
                      +++++.|.
T Consensus        77 ilVnnAg~   84 (242)
T d1cyda_          77 LLVNNAAL   84 (242)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99998874

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.35  E-value=0.0008  Score=53.30  Aligned_cols=79  Identities=10%  Similarity=0.032  Sum_probs=55.5

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hC---cceEEcCCCCCCccHHHHHHHh
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FG---ITDFINPATCGDKTVSQVIKEM  250 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lg---a~~v~~~~~~~~~~~~~~i~~~  250 (371)
                      |.+..-..+|++|||+|+|+.+.+++.-+..+|+ +|+++.|+.++.+.+.+ +.   ....+...+            .
T Consensus         9 l~~~~~~~~~k~vlIlGaGGaarai~~al~~~g~-~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~------------~   75 (170)
T d1nyta1           9 LERLSFIRPGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALSMDE------------L   75 (170)
T ss_dssp             HHHHTCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECCSGG------------G
T ss_pred             HHHcCCCCCCCEEEEECCcHHHHHHHHHhcccce-EEEeccchHHHHHHHHHHHhhccccccccccc------------c
Confidence            4333335678999999999999999988889999 89999999988776644 32   212222111            1


Q ss_pred             hCCCcCEEEECCCChH
Q 017457          251 TDGGADYCFECIGLTS  266 (371)
Q Consensus       251 ~~gg~d~vid~~g~~~  266 (371)
                      ....+|+++||++...
T Consensus        76 ~~~~~dliIN~Tp~G~   91 (170)
T d1nyta1          76 EGHEFDLIINATSSGI   91 (170)
T ss_dssp             TTCCCSEEEECCSCGG
T ss_pred             cccccceeecccccCc
Confidence            1127899999987543

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.35  E-value=0.0012  Score=56.14  Aligned_cols=80  Identities=19%  Similarity=0.306  Sum_probs=54.5

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCc-ceE----EcCCCCCCccHHHHHHHhh
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGI-TDF----INPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga-~~v----~~~~~~~~~~~~~~i~~~~  251 (371)
                      -+|+++||+|+ +++|.+.+..+...|+ +|+.+++++++.+.+.    +.+. ..+    .|-.+  +++..+.+....
T Consensus         8 lk~Kv~lITGas~GIG~aiA~~la~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~--~~~v~~~v~~~~   84 (257)
T d1xg5a_           8 WRDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN--EEDILSMFSAIR   84 (257)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTC--HHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCC--HHHHHHHHHHHH
Confidence            46899999998 9999999998888999 9999999998877653    2332 122    23222  123333333322


Q ss_pred             C--CCcCEEEECCCC
Q 017457          252 D--GGADYCFECIGL  264 (371)
Q Consensus       252 ~--gg~d~vid~~g~  264 (371)
                      .  |++|+++++.|.
T Consensus        85 ~~~g~iD~lVnnAg~   99 (257)
T d1xg5a_          85 SQHSGVDICINNAGL   99 (257)
T ss_dssp             HHHCCCSEEEECCCC
T ss_pred             HhcCCCCEEEecccc
Confidence            2  379999998875

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.34  E-value=0.001  Score=52.72  Aligned_cols=98  Identities=12%  Similarity=-0.010  Sum_probs=65.4

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      .+++|||+|+|.+|...++.+...|. .|++++++.++.+.+.+ ++...+.....    ........... ..|.++.+
T Consensus         1 ~~K~IliiGaG~~G~~~a~~L~~~g~-~V~v~dr~~~~a~~l~~~~~~~~~~~~~~----~~~~~~~~~i~-~~~~~i~~   74 (182)
T d1e5qa1           1 ATKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPISLDV----NDDAALDAEVA-KHDLVISL   74 (182)
T ss_dssp             CCCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESCHHHHHHHHTTCTTEEEEECCT----TCHHHHHHHHT-TSSEEEEC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECChHHHHHHHhcccccccccccc----cchhhhHhhhh-ccceeEee
Confidence            36899999999999999998888899 89999999999888765 33322221111    11222222221 57888888


Q ss_pred             CCChHHHHHHHHHhhcCCceEEEECc
Q 017457          262 IGLTSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       262 ~g~~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      ++..........++..+ -.++....
T Consensus        75 ~~~~~~~~~~~~~~~~~-~~~~~~~~   99 (182)
T d1e5qa1          75 IPYTFHATVIKSAIRQK-KHVVTTSY   99 (182)
T ss_dssp             SCGGGHHHHHHHHHHHT-CEEECSSC
T ss_pred             ccchhhhHHHHHHHhhc-cceeeccc
Confidence            87766455555566665 56665543

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.31  E-value=3.4e-05  Score=64.07  Aligned_cols=102  Identities=23%  Similarity=0.321  Sum_probs=70.5

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHHHHHH
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKE  249 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~  249 (371)
                      +.+..++++|++||-+|+|. |..++.+|+..|. .+|++++.+++..+.+++    .+.+.+.-...    +..   ..
T Consensus        67 ~l~~l~l~~g~~VLdiG~Gt-G~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~----d~~---~~  138 (213)
T d1dl5a1          67 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCG----DGY---YG  138 (213)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES----CGG---GC
T ss_pred             HHHhhhccccceEEEecCcc-chhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccC----chH---Hc
Confidence            45678899999999999877 8888889998763 289999999987777655    34432221111    110   00


Q ss_pred             hh-CCCcCEEEECCCChHHHHHHHHHhhcCCceEEEE
Q 017457          250 MT-DGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL  285 (371)
Q Consensus       250 ~~-~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~  285 (371)
                      +. .+.||+|+...+-....+.+++.|+++ |+++..
T Consensus       139 ~~~~~~fD~I~~~~~~~~~p~~l~~~LkpG-G~lv~p  174 (213)
T d1dl5a1         139 VPEFSPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP  174 (213)
T ss_dssp             CGGGCCEEEEEECSBBSCCCHHHHHHEEEE-EEEEEE
T ss_pred             cccccchhhhhhhccHHHhHHHHHHhcCCC-cEEEEE
Confidence            11 226999997766555457788999998 998773

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.30  E-value=0.00049  Score=58.05  Aligned_cols=80  Identities=14%  Similarity=0.161  Sum_probs=55.6

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhCcce-E--EcCCCCCCccHHHHHHHhhC--CC
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITD-F--INPATCGDKTVSQVIKEMTD--GG  254 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga~~-v--~~~~~~~~~~~~~~i~~~~~--gg  254 (371)
                      -+|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+. +++... .  .|-.+  .++..+.+.+...  ++
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~   80 (244)
T d1nffa_           4 LTGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQ--PAQWKAAVDTAVTAFGG   80 (244)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTC--HHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhCcceEEEeecCC--HHHHHHHHHHHHHHhCC
Confidence            46899999998 9999999999999999 9999999998877654 454322 2  22222  1222222333322  37


Q ss_pred             cCEEEECCCC
Q 017457          255 ADYCFECIGL  264 (371)
Q Consensus       255 ~d~vid~~g~  264 (371)
                      +|+++++.|.
T Consensus        81 idilinnAG~   90 (244)
T d1nffa_          81 LHVLVNNAGI   90 (244)
T ss_dssp             CCEEEECCCC
T ss_pred             CeEEEECCcc
Confidence            9999999885

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.29  E-value=0.00092  Score=56.56  Aligned_cols=102  Identities=13%  Similarity=0.211  Sum_probs=66.3

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcceE---EcCCCCCCccHHHHHHHhh--C
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITDF---INPATCGDKTVSQVIKEMT--D  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~~v---~~~~~~~~~~~~~~i~~~~--~  252 (371)
                      .++.+||+|+ +++|.+.+..+...|+ +|+++++++++.+.+.    +.|.+..   .|-.+  .++..+.+.+..  -
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~--~~~v~~~~~~~~~~~   85 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSK--KEEISEVINKILTEH   85 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTC--HHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHhc
Confidence            5789999998 9999999988888999 9999999988776543    3443321   23222  122222333222  2


Q ss_pred             CCcCEEEECCCChH-------------------------HHHHHHHHhhc-CCceEEEECc
Q 017457          253 GGADYCFECIGLTS-------------------------VMNDAFNSSRE-GWGKTVILGV  287 (371)
Q Consensus       253 gg~d~vid~~g~~~-------------------------~~~~~~~~l~~-~~G~~v~~g~  287 (371)
                      |++|+++++.|...                         ..+.+++.+.. ++|++|.++.
T Consensus        86 g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS  146 (251)
T d2c07a1          86 KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISS  146 (251)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             CCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECC
Confidence            38999999887511                         23445555532 2389999985

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=97.28  E-value=0.00082  Score=57.14  Aligned_cols=78  Identities=18%  Similarity=0.207  Sum_probs=55.2

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcce-E--EcCCCCCCccH----HHHHHHh
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-F--INPATCGDKTV----SQVIKEM  250 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~~-v--~~~~~~~~~~~----~~~i~~~  250 (371)
                      +|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+.    +.+... .  .|-.+   .+-    .+.+.+.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~---~~~~~~~~~~~~~~   80 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLS---RTERDKLMQTVAHV   80 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC---HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCC---HHHHHHHHHHHHHH
Confidence            6899999997 9999999999999999 9999999998766543    344432 2  23222   222    2233344


Q ss_pred             hCCCcCEEEECCCC
Q 017457          251 TDGGADYCFECIGL  264 (371)
Q Consensus       251 ~~gg~d~vid~~g~  264 (371)
                      .++..|+++++.|.
T Consensus        81 ~~g~idilinnag~   94 (258)
T d1ae1a_          81 FDGKLNILVNNAGV   94 (258)
T ss_dssp             TTSCCCEEEECCCC
T ss_pred             hCCCcEEEeccccc
Confidence            44478999998885

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=97.26  E-value=0.00051  Score=58.84  Aligned_cols=102  Identities=21%  Similarity=0.224  Sum_probs=67.3

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCc---ceEE--cCCCCCCccHHHHHHHhhC--C
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGI---TDFI--NPATCGDKTVSQVIKEMTD--G  253 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga---~~v~--~~~~~~~~~~~~~i~~~~~--g  253 (371)
                      +|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+.+ ++.   ...+  |-.+  .++..+.+.+...  |
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g   81 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTK--DEDVRNLVDTTIAKHG   81 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC--HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCCceEEEEccCCC--HHHHHHHHHHHHHHcC
Confidence            6899999998 9999999999889999 99999999988776543 432   2222  3222  1233333333222  3


Q ss_pred             CcCEEEECCCCh---------------------------HHHHHHHHHhhc-CCceEEEECc
Q 017457          254 GADYCFECIGLT---------------------------SVMNDAFNSSRE-GWGKTVILGV  287 (371)
Q Consensus       254 g~d~vid~~g~~---------------------------~~~~~~~~~l~~-~~G~~v~~g~  287 (371)
                      .+|+++++.|..                           ...+.+++.|.+ ++|+++.++.
T Consensus        82 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss  143 (268)
T d2bgka1          82 KLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTAS  143 (268)
T ss_dssp             CCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECC
T ss_pred             CcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccc
Confidence            799999988731                           034566666643 2378888865

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=97.25  E-value=0.00057  Score=58.03  Aligned_cols=104  Identities=19%  Similarity=0.292  Sum_probs=68.6

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCcce-E--EcCCCCCCccHHHHHHHhhC--CCc
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITD-F--INPATCGDKTVSQVIKEMTD--GGA  255 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~~-v--~~~~~~~~~~~~~~i~~~~~--gg~  255 (371)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++... .  .|-.+  .++..+.+.+...  |++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~i   80 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTI--EEDWQRVVAYAREEFGSV   80 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEcccCC--HHHHHHHHHHHHHHcCCc
Confidence            6899999998 8999999998888999 999999999887765 4465432 2  23222  1223232332222  379


Q ss_pred             CEEEECCCChH-------------------------HHHHHHHHhhc-CCceEEEECccC
Q 017457          256 DYCFECIGLTS-------------------------VMNDAFNSSRE-GWGKTVILGVEM  289 (371)
Q Consensus       256 d~vid~~g~~~-------------------------~~~~~~~~l~~-~~G~~v~~g~~~  289 (371)
                      |+++++.|...                         ..+.+++.+.. ++|++|.++...
T Consensus        81 DilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~  140 (254)
T d1hdca_          81 DGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAA  140 (254)
T ss_dssp             CEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred             cEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccch
Confidence            99999887411                         24455555443 238999998643

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=97.23  E-value=0.0005  Score=59.17  Aligned_cols=78  Identities=19%  Similarity=0.170  Sum_probs=54.5

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhCcceE---EcCCCCCCccHHHHHHHhhC--CCc
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDF---INPATCGDKTVSQVIKEMTD--GGA  255 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga~~v---~~~~~~~~~~~~~~i~~~~~--gg~  255 (371)
                      +|+++||+|+ +++|.+.+..+...|+ +|+++++++++.+.+. ++|....   .|-.+  .++..+.+.+...  +.+
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~g~i   80 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGA-KVAVLDKSAERLAELETDHGDNVLGIVGDVRS--LEDQKQAASRCVARFGKI   80 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeeEEeccccc--HHHHHHHHHHHHHHhCCc
Confidence            5899999998 9999999999999999 9999999998877654 4554321   23222  1222233332222  379


Q ss_pred             CEEEECCC
Q 017457          256 DYCFECIG  263 (371)
Q Consensus       256 d~vid~~g  263 (371)
                      |+++++.|
T Consensus        81 dilvnnAG   88 (276)
T d1bdba_          81 DTLIPNAG   88 (276)
T ss_dssp             CEEECCCC
T ss_pred             cccccccc
Confidence            99998876

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=97.23  E-value=0.00045  Score=58.74  Aligned_cols=79  Identities=24%  Similarity=0.313  Sum_probs=55.8

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCcceE---EcCCCCCCccHHHHHHHhhC--CCc
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDF---INPATCGDKTVSQVIKEMTD--GGA  255 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~~v---~~~~~~~~~~~~~~i~~~~~--gg~  255 (371)
                      +|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+ +++|....   .|-.+  .++..+.+.+...  |++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~--~~~v~~~~~~~~~~~g~i   80 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGA-RVAIADINLEAARATAAEIGPAACAIALDVTD--QASIDRCVAELLDRWGSI   80 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTE-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTC--HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEeeCCC--HHHHHHHHHHHHHHhCCc
Confidence            5899999998 9999999999999999 999999998887764 55765422   23222  1222222333222  379


Q ss_pred             CEEEECCCC
Q 017457          256 DYCFECIGL  264 (371)
Q Consensus       256 d~vid~~g~  264 (371)
                      |+++++.|.
T Consensus        81 DilVnnAg~   89 (256)
T d1k2wa_          81 DILVNNAAL   89 (256)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEeeccc
Confidence            999998884

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.19  E-value=0.00053  Score=57.88  Aligned_cols=78  Identities=23%  Similarity=0.268  Sum_probs=57.8

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcce-EEcCCCCCCccHHHHHHHhhCCCcCEE
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITD-FINPATCGDKTVSQVIKEMTDGGADYC  258 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~-v~~~~~~~~~~~~~~i~~~~~gg~d~v  258 (371)
                      -+|+++||+|+ +++|.+.++.....|+ +|+++++++++.+.+.+ .+... +.|...   .+..+...+.. ++.|++
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~-~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~---~~~~~~~~~~~-~~id~l   78 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDVTK---KKQIDQFANEV-ERLDVL   78 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTTC---HHHHHHHHHHC-SCCSEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhccCCceeeeeccc---ccccccccccc-ccceeE
Confidence            46899999998 9999999999999999 99999999988877665 34332 233222   44555544433 379999


Q ss_pred             EECCCC
Q 017457          259 FECIGL  264 (371)
Q Consensus       259 id~~g~  264 (371)
                      +++.|.
T Consensus        79 Vn~ag~   84 (245)
T d2ag5a1          79 FNVAGF   84 (245)
T ss_dssp             EECCCC
T ss_pred             Eecccc
Confidence            998875

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=97.19  E-value=0.00029  Score=59.56  Aligned_cols=102  Identities=11%  Similarity=0.110  Sum_probs=68.5

Q ss_pred             HHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHH----hC-cceEEcCCCCCCccHHHHHHH
Q 017457          176 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FG-ITDFINPATCGDKTVSQVIKE  249 (371)
Q Consensus       176 ~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~----lg-a~~v~~~~~~~~~~~~~~i~~  249 (371)
                      ....+++||++||=.|+|. |.++..+|++.|. .+|++++.+++..+.+++    ++ ...+--..    .++.+.   
T Consensus        78 i~~l~i~pG~rVLEiG~Gs-G~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~----~Di~~~---  149 (250)
T d1yb2a1          78 IMRCGLRPGMDILEVGVGS-GNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSR----SDIADF---  149 (250)
T ss_dssp             ---CCCCTTCEEEEECCTT-SHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEEC----SCTTTC---
T ss_pred             HHHcCCCCcCEEEEeeeeC-cHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEE----eeeecc---
Confidence            4567899999999999876 7778888888653 389999999998888765    22 22221111    122111   


Q ss_pred             hhCCCcCEEE-ECCCChHHHHHHHHHhhcCCceEEEEC
Q 017457          250 MTDGGADYCF-ECIGLTSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       250 ~~~gg~d~vi-d~~g~~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      +..+.||.|+ |.......+..+.+.|+++ |+++.+.
T Consensus       150 ~~~~~fD~V~ld~p~p~~~l~~~~~~LKpG-G~lv~~~  186 (250)
T d1yb2a1         150 ISDQMYDAVIADIPDPWNHVQKIASMMKPG-SVATFYL  186 (250)
T ss_dssp             CCSCCEEEEEECCSCGGGSHHHHHHTEEEE-EEEEEEE
T ss_pred             cccceeeeeeecCCchHHHHHHHHHhcCCC-ceEEEEe
Confidence            1123799887 4433334589999999998 9998764

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.19  E-value=0.0015  Score=52.19  Aligned_cols=98  Identities=13%  Similarity=0.093  Sum_probs=62.3

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCc-----ceEEcCCCCCCccHHHHHHHhhC
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGI-----TDFINPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga-----~~v~~~~~~~~~~~~~~i~~~~~  252 (371)
                      -++++|||+|+|+.+.+++..+...|+++++++.+++++.+.++    +++.     ..+.+..+     .. .+.+...
T Consensus        16 l~~k~vlIlGaGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~   89 (182)
T d1vi2a1          16 IKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLAD-----QQ-AFAEALA   89 (182)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTC-----HH-HHHHHHH
T ss_pred             cCCCEEEEECCcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeeccc-----cc-chhhhhc
Confidence            46799999999999999998888899989999999877655443    2221     12333322     22 1222111


Q ss_pred             CCcCEEEECCCChHH------HHHHHHHhhcCCceEEEECc
Q 017457          253 GGADYCFECIGLTSV------MNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       253 gg~d~vid~~g~~~~------~~~~~~~l~~~~G~~v~~g~  287 (371)
                       .+|+++||++-...      +..-+..++++ ..++++-.
T Consensus        90 -~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~-~~v~Di~Y  128 (182)
T d1vi2a1          90 -SADILTNGTKVGMKPLENESLVNDISLLHPG-LLVTECVY  128 (182)
T ss_dssp             -TCSEEEECSSTTSTTSCSCCSCCCGGGSCTT-CEEEECCC
T ss_pred             -ccceeccccCCccccccchhhhhHHHhhhcc-hhhHHhhc
Confidence             68999999873220      00113346665 77777754

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=97.18  E-value=0.0012  Score=56.13  Aligned_cols=103  Identities=13%  Similarity=0.127  Sum_probs=67.1

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcce-E--EcCCCCCCccHHHHHHHh---h
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITD-F--INPATCGDKTVSQVIKEM---T  251 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~-v--~~~~~~~~~~~~~~i~~~---~  251 (371)
                      +|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+.+    .|... .  .|-.+  ..+..+.+.+.   .
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~~   83 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSS--RSERQELMNTVANHF   83 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCC--HHHHHHHHHHHHHHh
Confidence            6899999998 9999999999889999 99999999888765432    34322 2  22222  12222222222   2


Q ss_pred             CCCcCEEEECCCChH-------------------------HHHHHHHHhhc-CCceEEEECcc
Q 017457          252 DGGADYCFECIGLTS-------------------------VMNDAFNSSRE-GWGKTVILGVE  288 (371)
Q Consensus       252 ~gg~d~vid~~g~~~-------------------------~~~~~~~~l~~-~~G~~v~~g~~  288 (371)
                      ++.+|+++++.|...                         ..+.+++.+.. .+|+++.++..
T Consensus        84 ~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~  146 (259)
T d2ae2a_          84 HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSV  146 (259)
T ss_dssp             TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCG
T ss_pred             CCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccc
Confidence            336999999988411                         23455555533 23899999864

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=97.15  E-value=0.0019  Score=54.87  Aligned_cols=106  Identities=16%  Similarity=0.281  Sum_probs=65.6

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hHHHHHH-----HhCcceEEcCCCCCCcc-HHHHHHHhhC-
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP-EKFEIGK-----KFGITDFINPATCGDKT-VSQVIKEMTD-  252 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~-~~~~~~~-----~lga~~v~~~~~~~~~~-~~~~i~~~~~-  252 (371)
                      -+|+++||+|+ +++|.+.+..+...|+ +|+++++++ ++.+.+.     +.|.+...-.-+..+.+ ..+.+.+... 
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            36899999998 9999999998889999 999999864 4444332     23443222111111122 2222222222 


Q ss_pred             -CCcCEEEECCCChH-------------------------HHHHHHHHhhc-CCceEEEECcc
Q 017457          253 -GGADYCFECIGLTS-------------------------VMNDAFNSSRE-GWGKTVILGVE  288 (371)
Q Consensus       253 -gg~d~vid~~g~~~-------------------------~~~~~~~~l~~-~~G~~v~~g~~  288 (371)
                       |++|+++++.|...                         ..+.+++.|.. ++|+++.++..
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~  143 (260)
T d1x1ta1          81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASA  143 (260)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred             hCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccc
Confidence             37999999988511                         24555666654 23899998764

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.13  E-value=0.00059  Score=57.94  Aligned_cols=80  Identities=18%  Similarity=0.155  Sum_probs=53.9

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HHhCcce-EEcCCCCCCcc-HHHHHHHhhC--C
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-FINPATCGDKT-VSQVIKEMTD--G  253 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~~-v~~~~~~~~~~-~~~~i~~~~~--g  253 (371)
                      +|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+    ++.|.+. .+.-+- .+++ ..+.+.+...  |
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dv-s~~~~~~~~~~~~~~~~g   87 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDI-TSEQELSALADFAISKLG   87 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-TCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEccC-CCHHHHHHHHHHHHHHcC
Confidence            6899999998 9999999999999999 999999998876654    3345432 222111 1122 2222222222  3


Q ss_pred             CcCEEEECCCC
Q 017457          254 GADYCFECIGL  264 (371)
Q Consensus       254 g~d~vid~~g~  264 (371)
                      ++|+++++.|.
T Consensus        88 ~iDilvnnAG~   98 (255)
T d1fmca_          88 KVDILVNNAGG   98 (255)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEeeeCCcC
Confidence            79999998875

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.12  E-value=0.001  Score=55.93  Aligned_cols=105  Identities=16%  Similarity=0.190  Sum_probs=69.2

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcc-eE--EcCCCCCCccHHHHHHHhh--
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DF--INPATCGDKTVSQVIKEMT--  251 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~-~v--~~~~~~~~~~~~~~i~~~~--  251 (371)
                      -.|+++||+|+ +++|.+.+......|+ +|+++++++++++.+.    +.|.+ +.  .|..+  .++..+.++...  
T Consensus         5 l~Gkv~lITGas~GIG~~ia~~la~~G~-~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~--~~~v~~~~~~i~~~   81 (244)
T d1yb1a_           5 VTGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSN--REDIYSSAKKVKAE   81 (244)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC--HHHHHHHHHHHHHH
Confidence            36899999998 8999998888888999 9999999998877653    34433 22  23222  122222333222  


Q ss_pred             CCCcCEEEECCCChH-------------------------HHHHHHHHhhcC-CceEEEECccC
Q 017457          252 DGGADYCFECIGLTS-------------------------VMNDAFNSSREG-WGKTVILGVEM  289 (371)
Q Consensus       252 ~gg~d~vid~~g~~~-------------------------~~~~~~~~l~~~-~G~~v~~g~~~  289 (371)
                      -|.+|+++++.|...                         ..+.+++.|... +|+++..+...
T Consensus        82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~  145 (244)
T d1yb1a_          82 IGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAA  145 (244)
T ss_dssp             TCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC
T ss_pred             cCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecch
Confidence            237999999988521                         244566666442 37899888643

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.12  E-value=0.0016  Score=54.36  Aligned_cols=73  Identities=18%  Similarity=0.120  Sum_probs=52.4

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      +|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+   +.+...+...-.   .. .+.+.+.. +.+|+++++
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga-~V~~~~r~~~~l~---~~~~~~~~~Dv~---~~-~~~~~~~~-g~iD~lVnn   73 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEELLK---RSGHRYVVCDLR---KD-LDLLFEKV-KEVDILVLN   73 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHH---HTCSEEEECCTT---TC-HHHHHHHS-CCCSEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHH---hcCCcEEEcchH---HH-HHHHHHHh-CCCcEEEec
Confidence            5899999998 9999999999999999 9999999876544   455544332112   22 33343333 379999998


Q ss_pred             CCC
Q 017457          262 IGL  264 (371)
Q Consensus       262 ~g~  264 (371)
                      .|.
T Consensus        74 AG~   76 (234)
T d1o5ia_          74 AGG   76 (234)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            874

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=97.08  E-value=0.00072  Score=57.24  Aligned_cols=103  Identities=15%  Similarity=0.169  Sum_probs=67.1

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCc--c-eEE--cCCCCCCccHHHHHHHhhC--C
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGI--T-DFI--NPATCGDKTVSQVIKEMTD--G  253 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga--~-~v~--~~~~~~~~~~~~~i~~~~~--g  253 (371)
                      +|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+.+ ++.  . ..+  |-.+  .++..+.+.+...  |
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~G   81 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSD--EDGWTKLFDATEKAFG   81 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC--HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCC--HHHHHHHHHHHHHHhC
Confidence            5899999998 9999999999999999 99999999988776543 332  1 222  2222  1222222222222  3


Q ss_pred             CcCEEEECCCChH-------------------------HHHHHHHHhhcC-C-ceEEEECcc
Q 017457          254 GADYCFECIGLTS-------------------------VMNDAFNSSREG-W-GKTVILGVE  288 (371)
Q Consensus       254 g~d~vid~~g~~~-------------------------~~~~~~~~l~~~-~-G~~v~~g~~  288 (371)
                      ++|+++++.|...                         ..+.+++.|... + |+++.++..
T Consensus        82 ~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~  143 (251)
T d1zk4a1          82 PVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSI  143 (251)
T ss_dssp             SCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCG
T ss_pred             CceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeecc
Confidence            7999999887521                         345566666542 1 478888753

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.05  E-value=0.00014  Score=61.15  Aligned_cols=99  Identities=15%  Similarity=0.185  Sum_probs=63.1

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCC---CCccHHHHHHHhhCC-CcCE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATC---GDKTVSQVIKEMTDG-GADY  257 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~---~~~~~~~~i~~~~~g-g~d~  257 (371)
                      +|++|||+|+ +++|.+.++.....|+ +|+.++.++.+..     .....+.....   ........+.+..+. ++|+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~-~V~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~   74 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA   74 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCccccc-----cccceeecccCcHHHHHHHHHHHHHHhCCCCceE
Confidence            4899999998 9999999999999999 9999876654321     11111111110   001122233333333 7999


Q ss_pred             EEECCCCh--------------------------HHHHHHHHHhhcCCceEEEECcc
Q 017457          258 CFECIGLT--------------------------SVMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       258 vid~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      ++++.|..                          ...+.+++.|+.+ |+++.++..
T Consensus        75 lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-G~Iv~isS~  130 (236)
T d1dhra_          75 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG-GLLTLAGAK  130 (236)
T ss_dssp             EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCG
T ss_pred             EEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccc-cceeEEccH
Confidence            99988731                          0345566678887 999999864

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.05  E-value=0.0026  Score=55.19  Aligned_cols=102  Identities=18%  Similarity=0.232  Sum_probs=65.5

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh---------hHHHHH-H---HhCcceEEcCCCCCCccHHHHHH
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP---------EKFEIG-K---KFGITDFINPATCGDKTVSQVIK  248 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~---------~~~~~~-~---~lga~~v~~~~~~~~~~~~~~i~  248 (371)
                      +|+++||+|+ +++|.+.+..+...|+ +|++++++.         +..+.+ +   ..+.....+..+  ..+..+.+.
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga-~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~v~   82 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDS--VEAGEKLVK   82 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCC--GGGHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccch--HHHHHHHHH
Confidence            5899999998 9999999999999999 899986542         233322 2   233334444333  123333333


Q ss_pred             Hhh--CCCcCEEEECCCCh-------------------------HHHHHHHHHhhc-CCceEEEECc
Q 017457          249 EMT--DGGADYCFECIGLT-------------------------SVMNDAFNSSRE-GWGKTVILGV  287 (371)
Q Consensus       249 ~~~--~gg~d~vid~~g~~-------------------------~~~~~~~~~l~~-~~G~~v~~g~  287 (371)
                      ...  -|++|+++++.|..                         ...+.+++.|.. ++|++|.++.
T Consensus        83 ~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS  149 (302)
T d1gz6a_          83 TALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTAS  149 (302)
T ss_dssp             HHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             HHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCC
Confidence            322  23799999998841                         134566666643 3389999986

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.05  E-value=0.0017  Score=55.42  Aligned_cols=105  Identities=20%  Similarity=0.231  Sum_probs=68.5

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC-hhHHHH----HHHhCcceE-EcCCCCCCccHHHHHHHhhC--
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN-PEKFEI----GKKFGITDF-INPATCGDKTVSQVIKEMTD--  252 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~-~~~~~~----~~~lga~~v-~~~~~~~~~~~~~~i~~~~~--  252 (371)
                      -+|+++||+|+ +++|.+.++.+...|+ +|++++++ ++..+.    +++.|.+.. +..+-.+.++..+.+.+...  
T Consensus        16 L~gK~~lITGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   94 (272)
T d1g0oa_          16 LEGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF   94 (272)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHh
Confidence            35899999998 9999999999999999 89888765 444333    344554432 22222112333344333332  


Q ss_pred             CCcCEEEECCCCh-------------------------HHHHHHHHHhhcCCceEEEECcc
Q 017457          253 GGADYCFECIGLT-------------------------SVMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       253 gg~d~vid~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      ++.|+++++.+..                         ...+.+++.|... |+++.++..
T Consensus        95 g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~-g~~i~i~s~  154 (272)
T d1g0oa_          95 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG-GRLILMGSI  154 (272)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT-CEEEEECCG
T ss_pred             CCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccc-ccccccccc
Confidence            3789999988752                         1356777788887 888888653

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=97.03  E-value=0.0013  Score=57.01  Aligned_cols=81  Identities=14%  Similarity=0.060  Sum_probs=53.7

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-----HhCcce-EEcCCCCCCccHHHH-HHHhh--
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-----KFGITD-FINPATCGDKTVSQV-IKEMT--  251 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-----~lga~~-v~~~~~~~~~~~~~~-i~~~~--  251 (371)
                      -+|+++||+|+ +++|.+.+..+...|+ +|++++++.++.+.+.     +.|... .+..+- .+.+-.+. +....  
T Consensus        23 l~gK~alITGas~GIG~aiA~~la~~Ga-~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~-~~~~~v~~~~~~~~~~  100 (294)
T d1w6ua_          23 FQGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDV-RDPDMVQNTVSELIKV  100 (294)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCT-TCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHhcCCceEEEEecc-cChHHHHHHhhhhhhh
Confidence            35799999997 9999999999999999 9999999988765432     234332 222221 11222222 22222  


Q ss_pred             CCCcCEEEECCCC
Q 017457          252 DGGADYCFECIGL  264 (371)
Q Consensus       252 ~gg~d~vid~~g~  264 (371)
                      .+++|+++++.|.
T Consensus       101 ~g~iDilvnnAg~  113 (294)
T d1w6ua_         101 AGHPNIVINNAAG  113 (294)
T ss_dssp             TCSCSEEEECCCC
T ss_pred             ccccchhhhhhhh
Confidence            2389999998885

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.03  E-value=0.00084  Score=57.61  Aligned_cols=100  Identities=17%  Similarity=0.287  Sum_probs=63.7

Q ss_pred             CCCeE-EEEcC-ChHHHHHHH-HHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eE--EcCCCCCCcc---HHHHHHH
Q 017457          183 VGSTV-AIFGL-GAVGLAVAE-GARLNRASKIIGVDINPEKFEIGKK----FGIT-DF--INPATCGDKT---VSQVIKE  249 (371)
Q Consensus       183 ~g~~V-LI~G~-g~~G~~ai~-la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v--~~~~~~~~~~---~~~~i~~  249 (371)
                      .|++| ||+|+ +++|.+.+. |++..|+ +|+.+++++++.+.+.+    .+.. .+  .|-.+  .++   +.+.+.+
T Consensus         1 ~g~rVAlVTGas~GIG~a~A~~la~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~--~~sv~~~~~~~~~   77 (275)
T d1wmaa1           1 SGIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDD--LQSIRALRDFLRK   77 (275)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             CCCeEEEECCCCCHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCC--HHHHHHHHHHHHH
Confidence            36777 77788 999998765 5666688 99999999988765432    3432 22  23222  112   2223333


Q ss_pred             hhCCCcCEEEECCCCh-------------------------HHHHHHHHHhhcCCceEEEECc
Q 017457          250 MTDGGADYCFECIGLT-------------------------SVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       250 ~~~gg~d~vid~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      .. +++|+++++.|..                         ...+.++..|++. |+++..+.
T Consensus        78 ~~-g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-g~ivnisS  138 (275)
T d1wmaa1          78 EY-GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ-GRVVNVSS  138 (275)
T ss_dssp             HH-SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE-EEEEEECC
T ss_pred             hc-CCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccccc
Confidence            22 3799999988841                         1244556667786 99998875

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.01  E-value=0.0053  Score=46.01  Aligned_cols=75  Identities=20%  Similarity=0.274  Sum_probs=56.4

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCC
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL  264 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~  264 (371)
                      +|+|.|.|.+|...++.+...|. .|++++.++++.+.+.+ ++.. ++..+.    .-.+.+++.--..+|.++-++.+
T Consensus         2 ~IvI~G~G~~G~~la~~L~~~g~-~v~vid~d~~~~~~~~~~~~~~-vi~Gd~----~~~~~l~~~~i~~a~~vv~~t~~   75 (132)
T d1lssa_           2 YIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDAL-VINGDC----TKIKTLEDAGIEDADMYIAVTGK   75 (132)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSE-EEESCT----TSHHHHHHTTTTTCSEEEECCSC
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-CcceecCChhhhhhhhhhhhhh-hccCcc----cchhhhhhcChhhhhhhcccCCc
Confidence            58999999999999999999999 99999999999988765 4654 443322    22334444433388999998887


Q ss_pred             hH
Q 017457          265 TS  266 (371)
Q Consensus       265 ~~  266 (371)
                      ..
T Consensus        76 d~   77 (132)
T d1lssa_          76 EE   77 (132)
T ss_dssp             HH
T ss_pred             HH
Confidence            65

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.01  E-value=0.0013  Score=55.63  Aligned_cols=103  Identities=20%  Similarity=0.204  Sum_probs=66.6

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-h-----Ccce-E--EcCCCCCCccHHHHHHHhhC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F-----GITD-F--INPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l-----ga~~-v--~~~~~~~~~~~~~~i~~~~~  252 (371)
                      .|+++||+|+ +++|.+.+..+...|+ +|++++++.++.+.+.+ +     +... .  .|-.+  .++..+.+.+...
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~   78 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD--QQQLRDTFRKVVD   78 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTS--HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCC--HHHHHHHHHHHHH
Confidence            5899999998 9999999999999999 99999999988765432 2     2121 1  23222  1222233333222


Q ss_pred             --CCcCEEEECCCChH-----------------HHHHHHHHhhcC----CceEEEECcc
Q 017457          253 --GGADYCFECIGLTS-----------------VMNDAFNSSREG----WGKTVILGVE  288 (371)
Q Consensus       253 --gg~d~vid~~g~~~-----------------~~~~~~~~l~~~----~G~~v~~g~~  288 (371)
                        |++|+++++.|...                 ..+.+++.|...    .|+++.++..
T Consensus        79 ~~G~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~  137 (254)
T d2gdza1          79 HFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSL  137 (254)
T ss_dssp             HHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCG
T ss_pred             HcCCcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccH
Confidence              37999999988521                 234455555431    2789998764

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=96.99  E-value=0.0013  Score=55.19  Aligned_cols=102  Identities=21%  Similarity=0.264  Sum_probs=68.8

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCcceE-E--cCCCCCCccHHHHHHHhhC--CC
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDF-I--NPATCGDKTVSQVIKEMTD--GG  254 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~~v-~--~~~~~~~~~~~~~i~~~~~--gg  254 (371)
                      -+|+++||+|+ +++|.+.++-+...|+ +|++++++.++.+.+ ++++.+.. +  |-.+  .++..+.+.+...  |+
T Consensus         3 l~gK~alItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~--~~~i~~~~~~i~~~~g~   79 (241)
T d2a4ka1           3 LSGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSD--PKAVEAVFAEALEEFGR   79 (241)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTS--HHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCceEEEEecCCC--HHHHHHHHHHHHHHhCC
Confidence            46899999998 9999999999999999 999999999887665 44665422 2  2222  1223232333322  37


Q ss_pred             cCEEEECCCChH-------------------------HHHHHHHHhhcCCceEEEECc
Q 017457          255 ADYCFECIGLTS-------------------------VMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       255 ~d~vid~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      +|+.+++.+...                         ..+..++.+..+ +.++..+.
T Consensus        80 iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~-~~i~~~ss  136 (241)
T d2a4ka1          80 LHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG-GSLVLTGS  136 (241)
T ss_dssp             CCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT-CEEEEECC
T ss_pred             ccEeccccccccccchhhhhccccccccccccccccccccccccccccc-cceeeccc
Confidence            999999877421                         245556677776 77766665

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=96.98  E-value=0.0016  Score=55.25  Aligned_cols=78  Identities=12%  Similarity=0.189  Sum_probs=52.8

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcceE---EcCCCCCCccHHHHHHHhhC--C
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITDF---INPATCGDKTVSQVIKEMTD--G  253 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~~v---~~~~~~~~~~~~~~i~~~~~--g  253 (371)
                      |+.+||+|+ +++|.+.+..+...|+ +|+++++++++.+.+.    +.|....   .|-.+  .++..+.+.+...  |
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~--~~~v~~~~~~~~~~~g   78 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS--VPEIEALVAAVVERYG   78 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCC--HHHHHHHHHHHHHHhC
Confidence            678899998 9999999998889999 9999999988766543    3454322   23222  1222222232222  3


Q ss_pred             CcCEEEECCCC
Q 017457          254 GADYCFECIGL  264 (371)
Q Consensus       254 g~d~vid~~g~  264 (371)
                      ++|+++++.|.
T Consensus        79 ~iDilVnnAG~   89 (257)
T d2rhca1          79 PVDVLVNNAGR   89 (257)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEecccc
Confidence            79999998875

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=96.94  E-value=0.00083  Score=55.70  Aligned_cols=99  Identities=17%  Similarity=0.220  Sum_probs=68.2

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCc--c--eEEcCCCCCCccHHHHHHHh
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI--T--DFINPATCGDKTVSQVIKEM  250 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga--~--~v~~~~~~~~~~~~~~i~~~  250 (371)
                      +.....+++|++||-+|+|. |..++.+|+.. . +|+.++.+++..+.+++.-.  .  .++..+.  ...+      .
T Consensus        62 ml~~L~l~~g~~VLdIG~Gs-Gy~ta~La~l~-~-~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~--~~g~------~  130 (224)
T d1vbfa_          62 MLDELDLHKGQKVLEIGTGI-GYYTALIAEIV-D-KVVSVEINEKMYNYASKLLSYYNNIKLILGDG--TLGY------E  130 (224)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHS-S-EEEEEESCHHHHHHHHHHHTTCSSEEEEESCG--GGCC------G
T ss_pred             HHHHhhhcccceEEEecCCC-CHHHHHHHHHh-c-ccccccccHHHHHHHHHHHhcccccccccCch--hhcc------h
Confidence            45667899999999999875 77777788864 4 89999999988887766321  1  2222111  0011      1


Q ss_pred             hCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEE
Q 017457          251 TDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL  285 (371)
Q Consensus       251 ~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~  285 (371)
                      ..+.||.++-..+-+.....+++.|+++ |+++..
T Consensus       131 ~~~pfD~Iiv~~a~~~ip~~l~~qLk~G-GrLV~p  164 (224)
T d1vbfa_         131 EEKPYDRVVVWATAPTLLCKPYEQLKEG-GIMILP  164 (224)
T ss_dssp             GGCCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             hhhhHHHHHhhcchhhhhHHHHHhcCCC-CEEEEE
Confidence            1236999986655555467788999998 998875

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.93  E-value=0.0015  Score=55.50  Aligned_cols=104  Identities=18%  Similarity=0.288  Sum_probs=66.9

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhHHHH----HHHhCcceE-EcCCCCCCccHHHHHHHhhC--
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGV-DINPEKFEI----GKKFGITDF-INPATCGDKTVSQVIKEMTD--  252 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~-~~~~~~~~~----~~~lga~~v-~~~~~~~~~~~~~~i~~~~~--  252 (371)
                      -.|+++||+|+ +++|.+.++.+...|+ +|+++ .++++..+.    +.+.|.+.. +..+-.+.++..+.+.+...  
T Consensus         4 L~GK~alITGas~GIG~aia~~la~~G~-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           4 LAGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence            46899999998 9999999999999999 78775 455554443    344565432 22222111222232333222  


Q ss_pred             CCcCEEEECCCCh-------------------------HHHHHHHHHhhcCCceEEEECc
Q 017457          253 GGADYCFECIGLT-------------------------SVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       253 gg~d~vid~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      |+.|+++++.|..                         ...+.+++.|+.+ |.++.+..
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-g~~iii~s  141 (259)
T d1ja9a_          83 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSS  141 (259)
T ss_dssp             SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             CCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC-Cccccccc
Confidence            2799999988852                         1356777888887 87777754

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=96.92  E-value=0.0019  Score=54.74  Aligned_cols=104  Identities=22%  Similarity=0.222  Sum_probs=66.7

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hC--cce-E--EcCCCCCCccHHHHHHHhhC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FG--ITD-F--INPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lg--a~~-v--~~~~~~~~~~~~~~i~~~~~  252 (371)
                      +|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+.+    .+  ... .  .|-.+  .++..+.+.+...
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~--~~~v~~~~~~~~~   79 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD--EAQVEAYVTATTE   79 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTS--HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCC--HHHHHHHHHHHHH
Confidence            5899999998 9999999999999999 99999999988765432    22  221 1  23222  1223222333222


Q ss_pred             --CCcCEEEECCCCh--------------------------HHHHHHHHHhh-cCCceEEEECccC
Q 017457          253 --GGADYCFECIGLT--------------------------SVMNDAFNSSR-EGWGKTVILGVEM  289 (371)
Q Consensus       253 --gg~d~vid~~g~~--------------------------~~~~~~~~~l~-~~~G~~v~~g~~~  289 (371)
                        |++|+++++.|..                          ...+.+++.+. ..+|+++.++...
T Consensus        80 ~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~  145 (258)
T d1iy8a_          80 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVG  145 (258)
T ss_dssp             HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGG
T ss_pred             HhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHh
Confidence              3799999987731                          02344555544 2338999998643

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.89  E-value=0.0013  Score=56.32  Aligned_cols=79  Identities=19%  Similarity=0.222  Sum_probs=53.3

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCc--ce--E--EcCCCCCCccHHHHHHHhh
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI--TD--F--INPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga--~~--v--~~~~~~~~~~~~~~i~~~~  251 (371)
                      +|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+.+    .|.  ..  .  .|-.+  ..+..+.+.+..
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~   79 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTE--ASGQDDIINTTL   79 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS--HHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCC--HHHHHHHHHHHH
Confidence            5899999998 9999999999989999 99999999888766532    332  11  2  23222  122222233322


Q ss_pred             C--CCcCEEEECCCC
Q 017457          252 D--GGADYCFECIGL  264 (371)
Q Consensus       252 ~--gg~d~vid~~g~  264 (371)
                      .  |.+|+++++.|.
T Consensus        80 ~~~G~iDilVnnAG~   94 (274)
T d1xhla_          80 AKFGKIDILVNNAGA   94 (274)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HHcCCceEEEeeccc
Confidence            2  379999998773

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.89  E-value=0.0012  Score=56.52  Aligned_cols=79  Identities=20%  Similarity=0.227  Sum_probs=53.4

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCc--c--eE--EcCCCCCCccHHHHHHHhh
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI--T--DF--INPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga--~--~v--~~~~~~~~~~~~~~i~~~~  251 (371)
                      +|+++||+|+ +++|.+.+..+...|+ +|+++++++++.+.+.+    .+.  .  ..  .|-.+  .++..+.+.+..
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~--~~~v~~~~~~~~   80 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTT--EDGQDQIINSTL   80 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTS--HHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCC--HHHHHHHHHHHH
Confidence            5899999998 9999999999999999 99999999988776533    331  1  11  23222  122222233322


Q ss_pred             C--CCcCEEEECCCC
Q 017457          252 D--GGADYCFECIGL  264 (371)
Q Consensus       252 ~--gg~d~vid~~g~  264 (371)
                      .  |++|+++++.|.
T Consensus        81 ~~~g~iDilvnnAG~   95 (272)
T d1xkqa_          81 KQFGKIDVLVNNAGA   95 (272)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HHhCCceEEEeCCcc
Confidence            2  379999998764

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=96.89  E-value=0.0014  Score=55.87  Aligned_cols=102  Identities=17%  Similarity=0.240  Sum_probs=71.9

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHH----hCc-ceEEcCCCCCCccHHHHHH
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGI-TDFINPATCGDKTVSQVIK  248 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~----lga-~~v~~~~~~~~~~~~~~i~  248 (371)
                      +....++++|++||=.|+|. |.+++.+|++.|. .+|+.++.+++..+.+++    +|. +.+....    .+.    .
T Consensus        95 Ii~~l~i~pG~~VLDiG~Gs-G~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~----~d~----~  165 (266)
T d1o54a_          95 IAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKV----RDI----S  165 (266)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEEC----CCG----G
T ss_pred             HHHhhCCCCCCEEEECCCCC-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEe----ccc----c
Confidence            45678999999999999877 7788888998753 289999999998877755    453 2221111    121    1


Q ss_pred             HhhCC-CcCEEEECCCCh-HHHHHHHHHhhcCCceEEEEC
Q 017457          249 EMTDG-GADYCFECIGLT-SVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       249 ~~~~g-g~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      ..... .+|.|+--.+.+ ..++.+.+.|+|+ |+++.+.
T Consensus       166 ~~~~~~~~D~V~~d~p~p~~~l~~~~~~LKpG-G~lv~~~  204 (266)
T d1o54a_         166 EGFDEKDVDALFLDVPDPWNYIDKCWEALKGG-GRFATVC  204 (266)
T ss_dssp             GCCSCCSEEEEEECCSCGGGTHHHHHHHEEEE-EEEEEEE
T ss_pred             ccccccceeeeEecCCCHHHHHHHHHhhcCCC-CEEEEEe
Confidence            11222 688887555554 4689999999998 9998764

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=96.87  E-value=0.0014  Score=55.82  Aligned_cols=79  Identities=22%  Similarity=0.254  Sum_probs=51.4

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-HHH----HHHHhCcceE-E--cCCCCCCccHHHHHHHhhC-
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE-KFE----IGKKFGITDF-I--NPATCGDKTVSQVIKEMTD-  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~-~~~----~~~~lga~~v-~--~~~~~~~~~~~~~i~~~~~-  252 (371)
                      +|+++||+|+ +++|.+.++.+...|+ +|++++++.+ +.+    .+++.|.+.. +  |-.+  .++..+.+.+... 
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~--~~~v~~~~~~~~~~   82 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTV--ESDVINLVQSAIKE   82 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTS--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHH
Confidence            6899999997 9999999988888999 9999988753 333    3344554322 2  3222  1222222232222 


Q ss_pred             -CCcCEEEECCCC
Q 017457          253 -GGADYCFECIGL  264 (371)
Q Consensus       253 -gg~d~vid~~g~  264 (371)
                       |++|+++++.|.
T Consensus        83 ~G~iDiLVnnAG~   95 (261)
T d1geea_          83 FGKLDVMINNAGL   95 (261)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             hCCCCEeecccee
Confidence             379999998875

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=96.85  E-value=0.0024  Score=53.72  Aligned_cols=103  Identities=19%  Similarity=0.272  Sum_probs=66.3

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH--HHHHHHhCcceE---EcCCCCCCccHHHHHHHhhC--CC
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK--FEIGKKFGITDF---INPATCGDKTVSQVIKEMTD--GG  254 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~--~~~~~~lga~~v---~~~~~~~~~~~~~~i~~~~~--gg  254 (371)
                      +|+++||+|+ +++|.+.++.+...|+ +|+++++++++  .+.+++.|.+..   .|-.+  ..+..+.+.+...  |+
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~--~~~v~~~~~~~~~~~G~   80 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQ--PGDVEAFGKQVISTFGR   80 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHHHcCCcEEEEEeeCCC--HHHHHHHHHHHHHHcCC
Confidence            5899999998 9999999999999999 89999876543  334556665422   23222  1222222232222  37


Q ss_pred             cCEEEECCCChH-------------------------HHHHHHHHhhc-CCceEEEECcc
Q 017457          255 ADYCFECIGLTS-------------------------VMNDAFNSSRE-GWGKTVILGVE  288 (371)
Q Consensus       255 ~d~vid~~g~~~-------------------------~~~~~~~~l~~-~~G~~v~~g~~  288 (371)
                      +|+++++.|...                         ..+.+++.|.. ++|+++.+++.
T Consensus        81 iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~  140 (247)
T d2ew8a1          81 CDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTST  140 (247)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred             CCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccc
Confidence            999999888511                         23455555543 23899988864

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.85  E-value=0.0017  Score=54.93  Aligned_cols=81  Identities=17%  Similarity=0.271  Sum_probs=51.6

Q ss_pred             CCCeEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHHHHHHhh--CC
Q 017457          183 VGSTVAIFGL-G--AVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMT--DG  253 (371)
Q Consensus       183 ~g~~VLI~G~-g--~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~~--~g  253 (371)
                      +|+++||+|+ |  ++|.+.++.+...|+ +|++++++++..+.+++    .+....+..+-.+.++..+.+....  -|
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG   85 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcC
Confidence            6899999997 5  799999988888999 89999988765544433    3333333322211122222222222  13


Q ss_pred             CcCEEEECCCC
Q 017457          254 GADYCFECIGL  264 (371)
Q Consensus       254 g~d~vid~~g~  264 (371)
                      +.|+++++.+.
T Consensus        86 ~iDilVnnag~   96 (256)
T d1ulua_          86 GLDYLVHAIAF   96 (256)
T ss_dssp             SEEEEEECCCC
T ss_pred             CceEEEecccc
Confidence            79999998763

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=96.85  E-value=0.001  Score=56.34  Aligned_cols=103  Identities=12%  Similarity=0.074  Sum_probs=62.7

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcce----EEcCCCCCCccHHHHHHHhhC-
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITD----FINPATCGDKTVSQVIKEMTD-  252 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~----v~~~~~~~~~~~~~~i~~~~~-  252 (371)
                      +|++|||+|+ +++|.+.+......|+ +|+++.++.++.+.+.+    .+...    ..|... +..+..+.+.+... 
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~-~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~   81 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNL-KNFVILDRVENPTALAELKAINPKVNITFHTYDVTV-PVAESKKLLKKIFDQ   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCC-SEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTS-CHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCC-CHHHHHHHHHHHHHH
Confidence            5899999998 8999999988888999 77777666555444432    22111    122211 11223333333322 


Q ss_pred             -CCcCEEEECCCChH-----------------HHHHHHHHhhc-----CCceEEEECcc
Q 017457          253 -GGADYCFECIGLTS-----------------VMNDAFNSSRE-----GWGKTVILGVE  288 (371)
Q Consensus       253 -gg~d~vid~~g~~~-----------------~~~~~~~~l~~-----~~G~~v~~g~~  288 (371)
                       +++|+++++.|...                 ..+.+++.|..     + |+++.++..
T Consensus        82 ~g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~-g~Ii~isS~  139 (254)
T d1sbya1          82 LKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPG-GIIANICSV  139 (254)
T ss_dssp             HSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCC-EEEEEECCG
T ss_pred             cCCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCC-ceEEEEech
Confidence             37999999988521                 24455555532     3 788888754

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=96.84  E-value=0.0011  Score=56.34  Aligned_cols=79  Identities=18%  Similarity=0.237  Sum_probs=52.9

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-----HHhCcce-EE--cCCCCCCccHHHHHHHhh--
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-----KKFGITD-FI--NPATCGDKTVSQVIKEMT--  251 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-----~~lga~~-v~--~~~~~~~~~~~~~i~~~~--  251 (371)
                      +|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+     ++.|.+. .+  |-.+  .++..+.+.+..  
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~   84 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSN--TDIVTKTIQQIDAD   84 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCC--HHHHHHHHHHHHHH
Confidence            5899999998 9999999999999999 999999988765443     3345432 22  3222  122222233322  


Q ss_pred             CCCcCEEEECCCC
Q 017457          252 DGGADYCFECIGL  264 (371)
Q Consensus       252 ~gg~d~vid~~g~  264 (371)
                      -|++|+++++.|.
T Consensus        85 ~g~iDilVnnAg~   97 (260)
T d1h5qa_          85 LGPISGLIANAGV   97 (260)
T ss_dssp             SCSEEEEEECCCC
T ss_pred             hCCCcEecccccc
Confidence            2379999998874

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.83  E-value=0.0063  Score=48.14  Aligned_cols=87  Identities=17%  Similarity=0.173  Sum_probs=59.5

Q ss_pred             CCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcC-------CCCCCccHHHHHHHhhCCCcC
Q 017457          184 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP-------ATCGDKTVSQVIKEMTDGGAD  256 (371)
Q Consensus       184 g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~-------~~~~~~~~~~~i~~~~~gg~d  256 (371)
                      .+++-|+|+|.+|++.+..+...|. .|++.++++++.+.+.+.+.......       ......+..+.+     ..+|
T Consensus         1 sk~iaIiGaG~~G~~~A~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-----~~aD   74 (184)
T d1bg6a2           1 SKTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAV-----KDAD   74 (184)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHH-----TTCS
T ss_pred             CCEEEEECccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHh-----cCCC
Confidence            3789999999999999999999999 99999999999988877553211110       000001222222     1689


Q ss_pred             EEEECCCChHHHHHHHHHhhc
Q 017457          257 YCFECIGLTSVMNDAFNSSRE  277 (371)
Q Consensus       257 ~vid~~g~~~~~~~~~~~l~~  277 (371)
                      ++|-++.... ....++.+++
T Consensus        75 ~iii~v~~~~-~~~~~~~i~~   94 (184)
T d1bg6a2          75 VILIVVPAIH-HASIAANIAS   94 (184)
T ss_dssp             EEEECSCGGG-HHHHHHHHGG
T ss_pred             EEEEEEchhH-HHHHHHHhhh
Confidence            9999998766 5555554443

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.83  E-value=0.0021  Score=55.76  Aligned_cols=81  Identities=15%  Similarity=0.185  Sum_probs=54.2

Q ss_pred             CCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-Hh--------Ccce-EE--cCCCCCCccHHHHH
Q 017457          181 VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF--------GITD-FI--NPATCGDKTVSQVI  247 (371)
Q Consensus       181 ~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~l--------ga~~-v~--~~~~~~~~~~~~~i  247 (371)
                      .-+|+++||+|+ +++|.+.++.+...|+ +|++++++.++.+.+. ++        +... .+  |-.+  .++..+.+
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga-~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~--~~~v~~~~   85 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRN--EEEVNNLV   85 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTC--HHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCC--HHHHHHHH
Confidence            457899999998 9999999999889999 9999999988766542 22        2221 12  2222  12233333


Q ss_pred             HHhhC--CCcCEEEECCCC
Q 017457          248 KEMTD--GGADYCFECIGL  264 (371)
Q Consensus       248 ~~~~~--gg~d~vid~~g~  264 (371)
                      .+...  |+.|+++++.|.
T Consensus        86 ~~~~~~~G~iDiLVnnAg~  104 (297)
T d1yxma1          86 KSTLDTFGKINFLVNNGGG  104 (297)
T ss_dssp             HHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHhCCeEEEEeeccc
Confidence            33222  379999998874

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=96.82  E-value=0.0027  Score=50.80  Aligned_cols=100  Identities=8%  Similarity=0.033  Sum_probs=65.8

Q ss_pred             HHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhC-cc-----------------eEEcCCC
Q 017457          176 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG-IT-----------------DFINPAT  237 (371)
Q Consensus       176 ~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lg-a~-----------------~v~~~~~  237 (371)
                      +....+.+|.+||..|+|. |..++.+|+. |+ +|++++.+++..+.+++.- ..                 .++..+-
T Consensus        13 ~~~l~~~~~~rvLd~GCG~-G~~a~~la~~-G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~   89 (201)
T d1pjza_          13 WSSLNVVPGARVLVPLCGK-SQDMSWLSGQ-GY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF   89 (201)
T ss_dssp             HHHHCCCTTCEEEETTTCC-SHHHHHHHHH-CC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC
T ss_pred             HHHcCCCCCCEEEEecCcC-CHHHHHHHHc-CC-ceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccc
Confidence            3456789999999999876 7788888874 99 9999999999988887631 10                 1111111


Q ss_pred             CCCccHHHHHHHhhCCCcCEEEECCCC--------hHHHHHHHHHhhcCCceEEEEC
Q 017457          238 CGDKTVSQVIKEMTDGGADYCFECIGL--------TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       238 ~~~~~~~~~i~~~~~gg~d~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                         .++....    ...+|+|++...-        ...++.+.+.|+++ |+++...
T Consensus        90 ---~~l~~~~----~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~Lkpg-G~l~l~~  138 (201)
T d1pjza_          90 ---FALTARD----IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQA-CSGLLIT  138 (201)
T ss_dssp             ---SSSTHHH----HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSE-EEEEEEE
T ss_pred             ---ccccccc----ccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCC-cEEEEEE
Confidence               1111111    1168998874431        23467888999998 9876543

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.80  E-value=0.005  Score=48.10  Aligned_cols=76  Identities=17%  Similarity=0.267  Sum_probs=56.2

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCc-ceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCC
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI-TDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL  264 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga-~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~  264 (371)
                      +|.|+|.|.+|...+..++..|. +|++.++++++.+.+++.|. +...+..+        .+     ...|+||-++..
T Consensus         2 kI~iIG~G~mG~~lA~~l~~~g~-~V~~~d~~~~~~~~a~~~~~~~~~~~~~~--------~~-----~~~DiIilavp~   67 (165)
T d2f1ka2           2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAGQDLS--------LL-----QTAKIIFLCTPI   67 (165)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEESCGG--------GG-----TTCSEEEECSCH
T ss_pred             EEEEEeecHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHhhccceeeeecc--------cc-----cccccccccCcH
Confidence            58899999999988888888999 99999999999999988885 44432211        11     268999998886


Q ss_pred             hHHHHHHHHHhh
Q 017457          265 TSVMNDAFNSSR  276 (371)
Q Consensus       265 ~~~~~~~~~~l~  276 (371)
                      .. ....++.+.
T Consensus        68 ~~-~~~vl~~l~   78 (165)
T d2f1ka2          68 QL-ILPTLEKLI   78 (165)
T ss_dssp             HH-HHHHHHHHG
T ss_pred             hh-hhhhhhhhh
Confidence            54 444555443

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.76  E-value=0.0017  Score=55.18  Aligned_cols=79  Identities=19%  Similarity=0.212  Sum_probs=52.9

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCc--c--eE--EcCCCCCCccHHHHHHHhh
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI--T--DF--INPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga--~--~v--~~~~~~~~~~~~~~i~~~~  251 (371)
                      +|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+.+    .+.  .  ..  .|-.+  ..+..+.+.+..
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~--~~~v~~~~~~~~   80 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTT--DAGQDEILSTTL   80 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS--HHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCC--HHHHHHHHHHHH
Confidence            6899999998 9999999999999999 99999999988766532    331  1  12  23222  122222233322


Q ss_pred             C--CCcCEEEECCCC
Q 017457          252 D--GGADYCFECIGL  264 (371)
Q Consensus       252 ~--gg~d~vid~~g~  264 (371)
                      .  |++|+++++.|.
T Consensus        81 ~~~g~iDilvnnAG~   95 (264)
T d1spxa_          81 GKFGKLDILVNNAGA   95 (264)
T ss_dssp             HHHSCCCEEEECCC-
T ss_pred             HHhCCCCEeeccccc
Confidence            2  379999998773

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=96.75  E-value=0.0053  Score=51.68  Aligned_cols=95  Identities=19%  Similarity=0.346  Sum_probs=63.8

Q ss_pred             CCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eEEcCCCCCCccHHHHHHHhhCCC
Q 017457          180 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTDGG  254 (371)
Q Consensus       180 ~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~~~~~~~~~~~~~~i~~~~~gg  254 (371)
                      ..++|++||=+|+|. |.+++.+++ +|+ +|++++.+++..+.+++    .|.. .++.      .+..+   ....+.
T Consensus       117 ~~~~g~~VLDiGcGs-G~l~i~aa~-~g~-~V~gvDis~~av~~A~~na~~n~~~~~~~~------~d~~~---~~~~~~  184 (254)
T d2nxca1         117 HLRPGDKVLDLGTGS-GVLAIAAEK-LGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLE------GSLEA---ALPFGP  184 (254)
T ss_dssp             HCCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEE------SCHHH---HGGGCC
T ss_pred             hcCccCEEEEcccch-hHHHHHHHh-cCC-EEEEEECChHHHHHHHHHHHHcCCceeEEe------ccccc---cccccc
Confidence            368999999999865 666665554 688 89999999998777754    4432 2332      22222   222348


Q ss_pred             cCEEEECCCCh---HHHHHHHHHhhcCCceEEEECc
Q 017457          255 ADYCFECIGLT---SVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       255 ~d~vid~~g~~---~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      ||+|+......   ..++.+.+.|+|+ |+++..|.
T Consensus       185 fD~V~ani~~~~l~~l~~~~~~~LkpG-G~lilSgi  219 (254)
T d2nxca1         185 FDLLVANLYAELHAALAPRYREALVPG-GRALLTGI  219 (254)
T ss_dssp             EEEEEEECCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             cchhhhccccccHHHHHHHHHHhcCCC-cEEEEEec
Confidence            99998544322   2356778899998 99987653

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.73  E-value=0.0028  Score=47.68  Aligned_cols=76  Identities=22%  Similarity=0.344  Sum_probs=56.3

Q ss_pred             CeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCC
Q 017457          185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL  264 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~  264 (371)
                      ++++|.|.|.+|...++.+...|. .|++++.++++.+.+++.|...++-...  +.+.   +.+..-..+|.++-++++
T Consensus         1 k~~iIiG~G~~G~~la~~L~~~g~-~vvvid~d~~~~~~~~~~~~~~~~gd~~--~~~~---l~~a~i~~a~~vi~~~~~   74 (134)
T d2hmva1           1 KQFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATHAVIANAT--EENE---LLSLGIRNFEYVIVAIGA   74 (134)
T ss_dssp             CCEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHHTTTTCSEEEECCTT--CTTH---HHHHTGGGCSEEEECCCS
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCC-eEEEecCcHHHHHHHHHhCCcceeeecc--cchh---hhccCCccccEEEEEcCc
Confidence            468889999999999999999999 8999999999999998888755442211  1333   333321268888887775


Q ss_pred             hH
Q 017457          265 TS  266 (371)
Q Consensus       265 ~~  266 (371)
                      ..
T Consensus        75 ~~   76 (134)
T d2hmva1          75 NI   76 (134)
T ss_dssp             CH
T ss_pred             hH
Confidence            43

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.72  E-value=0.00086  Score=56.65  Aligned_cols=81  Identities=16%  Similarity=0.189  Sum_probs=53.6

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCC-eEEEEcCChhHHHHHHHhCcc--eEE--cCCCC-CCccHHHHHHHhhCC-Cc
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRAS-KIIGVDINPEKFEIGKKFGIT--DFI--NPATC-GDKTVSQVIKEMTDG-GA  255 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~-~Vi~~~~~~~~~~~~~~lga~--~v~--~~~~~-~~~~~~~~i~~~~~g-g~  255 (371)
                      .++|||+|+ +++|.+.++.+...|+. +|+.+.++.++.+.+++....  +++  |-.+. ....+.+.+.+..+. +.
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i   82 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence            489999998 99999988877777863 788899999988887764322  222  32220 011233334333344 69


Q ss_pred             CEEEECCCC
Q 017457          256 DYCFECIGL  264 (371)
Q Consensus       256 d~vid~~g~  264 (371)
                      |+++++.|.
T Consensus        83 dilinnAG~   91 (250)
T d1yo6a1          83 SLLINNAGV   91 (250)
T ss_dssp             CEEEECCCC
T ss_pred             EEEEEcCcc
Confidence            999998884

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.71  E-value=0.0017  Score=53.75  Aligned_cols=95  Identities=17%  Similarity=0.172  Sum_probs=65.3

Q ss_pred             CCCCCCeEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHH----hCc-----c--eEEcCCCCCCccHHHHH
Q 017457          180 GVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGI-----T--DFINPATCGDKTVSQVI  247 (371)
Q Consensus       180 ~~~~g~~VLI~G~g~~G~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~----lga-----~--~v~~~~~~~~~~~~~~i  247 (371)
                      .+++|++||-+|+|. |..++.+|+..|. .+|+.++.+++-.+.+++    .+.     .  .+...+      ..   
T Consensus        73 ~l~~g~~VLdiG~Gs-Gy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD------~~---  142 (224)
T d1i1na_          73 QLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGD------GR---  142 (224)
T ss_dssp             TSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESC------GG---
T ss_pred             ccCCCCeEEEecCCC-CHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEee------cc---
Confidence            689999999999977 8888889988763 389999999887666543    221     1  111111      10   


Q ss_pred             HHhh-CCCcCEEEECCCChHHHHHHHHHhhcCCceEEEE
Q 017457          248 KEMT-DGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL  285 (371)
Q Consensus       248 ~~~~-~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~  285 (371)
                      ..+. .+.||.|+.+..-....+.+++.|+++ |+++..
T Consensus       143 ~~~~~~~~fD~I~~~~~~~~ip~~l~~~LkpG-G~LV~p  180 (224)
T d1i1na_         143 MGYAEEAPYDAIHVGAAAPVVPQALIDQLKPG-GRLILP  180 (224)
T ss_dssp             GCCGGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             cccchhhhhhhhhhhcchhhcCHHHHhhcCCC-cEEEEE
Confidence            0011 127999997666555467899999998 998874

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=96.69  E-value=0.0024  Score=53.21  Aligned_cols=93  Identities=12%  Similarity=0.136  Sum_probs=67.9

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      +.++.+||=+|+|. |..+..+++ .|+ +|++++.+++..+.+++-+...++..+.   .++     ....+.+|+|+.
T Consensus        40 ~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~giD~s~~~l~~a~~~~~~~~~~~~~---~~l-----~~~~~~fD~ii~  108 (246)
T d2avna1          40 LKNPCRVLDLGGGT-GKWSLFLQE-RGF-EVVLVDPSKEMLEVAREKGVKNVVEAKA---EDL-----PFPSGAFEAVLA  108 (246)
T ss_dssp             CCSCCEEEEETCTT-CHHHHHHHT-TTC-EEEEEESCHHHHHHHHHHTCSCEEECCT---TSC-----CSCTTCEEEEEE
T ss_pred             cCCCCEEEEECCCC-chhcccccc-cce-EEEEeecccccccccccccccccccccc---ccc-----ccccccccceee
Confidence            56788999999885 888888876 588 9999999999999999877665554333   222     122348999986


Q ss_pred             CCC------C-hHHHHHHHHHhhcCCceEEEE
Q 017457          261 CIG------L-TSVMNDAFNSSREGWGKTVIL  285 (371)
Q Consensus       261 ~~g------~-~~~~~~~~~~l~~~~G~~v~~  285 (371)
                      ...      + ...++.+.+.|+++ |.++..
T Consensus       109 ~~~~~~~~~d~~~~l~~i~r~Lk~g-G~~ii~  139 (246)
T d2avna1         109 LGDVLSYVENKDKAFSEIRRVLVPD-GLLIAT  139 (246)
T ss_dssp             CSSHHHHCSCHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ecchhhhhhhHHHHHHHHHhhcCcC-cEEEEE
Confidence            533      2 22467888999998 987653

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=96.66  E-value=0.0036  Score=52.83  Aligned_cols=77  Identities=16%  Similarity=0.180  Sum_probs=50.9

Q ss_pred             CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcceE---EcCCCCCCccHHHHHHHhhC--CC
Q 017457          185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITDF---INPATCGDKTVSQVIKEMTD--GG  254 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~~v---~~~~~~~~~~~~~~i~~~~~--gg  254 (371)
                      +.+||+|+ +++|.+.+..+...|+ +|+++++++++.+.+.    +.|.+..   .|-.+  .++..+.+.+...  |+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~   78 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD--RDQVFAAVEQARKTLGG   78 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHHHTTC
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC--HHHHHHHHHHHHHHhCC
Confidence            45699998 9999998888888999 9999999998876543    3454321   23222  1222222233222  37


Q ss_pred             cCEEEECCCC
Q 017457          255 ADYCFECIGL  264 (371)
Q Consensus       255 ~d~vid~~g~  264 (371)
                      +|+++++.|.
T Consensus        79 iDilVnnAG~   88 (255)
T d1gega_          79 FDVIVNNAGV   88 (255)
T ss_dssp             CCEEEECCCC
T ss_pred             ccEEEecccc
Confidence            9999998874

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=96.61  E-value=0.0051  Score=51.84  Aligned_cols=84  Identities=15%  Similarity=0.100  Sum_probs=52.0

Q ss_pred             CCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH-------HHHHHHhCcceE-EcCCCCCCccHHHHHHH-
Q 017457          180 GVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-------FEIGKKFGITDF-INPATCGDKTVSQVIKE-  249 (371)
Q Consensus       180 ~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~-------~~~~~~lga~~v-~~~~~~~~~~~~~~i~~-  249 (371)
                      ..+|+.++||+|+ +++|.+.+..+...|+++|+.+.++..+       .+.++..|.... +.-+- .+.+-.+.+.+ 
T Consensus         5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv-~d~~~~~~~~~~   83 (259)
T d2fr1a1           5 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDV-TDRESVRELLGG   83 (259)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCT-TCHHHHHHHHHT
T ss_pred             ccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhcccccccccccc-chHHHHHHhhcc
Confidence            4688999999997 9999999988888898667777665322       223344565322 21111 11233333332 


Q ss_pred             hhCC-CcCEEEECCCC
Q 017457          250 MTDG-GADYCFECIGL  264 (371)
Q Consensus       250 ~~~g-g~d~vid~~g~  264 (371)
                      .... ..|.++++.|.
T Consensus        84 i~~~~~i~~vv~~ag~   99 (259)
T d2fr1a1          84 IGDDVPLSAVFHAAAT   99 (259)
T ss_dssp             SCTTSCEEEEEECCCC
T ss_pred             cccccccccccccccc
Confidence            2222 68899988874

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.60  E-value=0.0042  Score=52.59  Aligned_cols=104  Identities=14%  Similarity=0.140  Sum_probs=71.1

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHH----hC---cceEEcCCCCCCccHHHH
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FG---ITDFINPATCGDKTVSQV  246 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~----lg---a~~v~~~~~~~~~~~~~~  246 (371)
                      +....+++||++||=.|+|. |.++..+|++.|- .+|+.++.+++..+.+++    ++   .+.+....    .+..+ 
T Consensus        88 Ii~~l~i~PG~~VLE~G~Gs-G~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~----~d~~~-  161 (264)
T d1i9ga_          88 IVHEGDIFPGARVLEAGAGS-GALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVV----SDLAD-  161 (264)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEEC----SCGGG-
T ss_pred             HHHHhCCCCCCEEEecCcCC-cHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEe----ccccc-
Confidence            45678999999999999877 8888899998764 389999999998887764    21   22221111    11111 


Q ss_pred             HHHhhCCCcCEEEECCCC-hHHHHHHHHHhhcCCceEEEEC
Q 017457          247 IKEMTDGGADYCFECIGL-TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       247 i~~~~~gg~d~vid~~g~-~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                       ..+..+.+|.||--.++ ...+..+.+.|+++ |+++.+.
T Consensus       162 -~~~~~~~fDaV~ldlp~P~~~l~~~~~~LkpG-G~lv~~~  200 (264)
T d1i9ga_         162 -SELPDGSVDRAVLDMLAPWEVLDAVSRLLVAG-GVLMVYV  200 (264)
T ss_dssp             -CCCCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEE
T ss_pred             -ccccCCCcceEEEecCCHHHHHHHHHhccCCC-CEEEEEe
Confidence             01112378988743444 34588999999998 9998774

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.58  E-value=0.0043  Score=48.92  Aligned_cols=93  Identities=11%  Similarity=0.005  Sum_probs=59.8

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCc---ceEEcCCCCCCccHHHHHHHhhCCCcC
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGI---TDFINPATCGDKTVSQVIKEMTDGGAD  256 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga---~~v~~~~~~~~~~~~~~i~~~~~gg~d  256 (371)
                      ..++++|+|+|+|+.+.+++..+...+. +|+++.|+.++.+.+.+ +..   ...+..+.            .....+|
T Consensus        15 ~~~~k~vlIlGaGGaarai~~aL~~~~~-~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~------------~~~~~~d   81 (171)
T d1p77a1          15 LRPNQHVLILGAGGATKGVLLPLLQAQQ-NIVLANRTFSKTKELAERFQPYGNIQAVSMDS------------IPLQTYD   81 (171)
T ss_dssp             CCTTCEEEEECCSHHHHTTHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG------------CCCSCCS
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHcccCc-eeeeccchHHHHHHHHHHHhhccccchhhhcc------------ccccccc
Confidence            4578999999999999998887776554 99999999988776543 331   12222111            1112789


Q ss_pred             EEEECCCChHH---HHHHHHHhhcCCceEEEECc
Q 017457          257 YCFECIGLTSV---MNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       257 ~vid~~g~~~~---~~~~~~~l~~~~G~~v~~g~  287 (371)
                      ++++|++....   .......++++ ..++++-.
T Consensus        82 iiIN~tp~g~~~~~~~~~~~~~~~~-~~~~D~vy  114 (171)
T d1p77a1          82 LVINATSAGLSGGTASVDAEILKLG-SAFYDMQY  114 (171)
T ss_dssp             EEEECCCC-------CCCHHHHHHC-SCEEESCC
T ss_pred             eeeecccccccccccchhhhhhccc-ceeeeeec
Confidence            99999885431   11223445665 67777654

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.56  E-value=0.0024  Score=51.94  Aligned_cols=96  Identities=15%  Similarity=0.149  Sum_probs=64.6

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  262 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~  262 (371)
                      .++|+|+|+ |.+|...+..+...|. +|+++.+++++.......++..+. .+-   .+. +.+.+... ++|+||.++
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~-gD~---~d~-~~l~~al~-~~d~vi~~~   75 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPAHVVV-GDV---LQA-ADVDKTVA-GQDAVIVLL   75 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCSEEEE-SCT---TSH-HHHHHHHT-TCSEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEEcChhhccccccccccccc-ccc---cch-hhHHHHhc-CCCEEEEEe
Confidence            478999998 9999999998888999 999999998886544444444332 222   232 23433333 689999998


Q ss_pred             CCh----------HHHHHHHHHhhcCCc--eEEEECc
Q 017457          263 GLT----------SVMNDAFNSSREGWG--KTVILGV  287 (371)
Q Consensus       263 g~~----------~~~~~~~~~l~~~~G--~~v~~g~  287 (371)
                      |..          .....+++.++.. |  +++.++.
T Consensus        76 g~~~~~~~~~~~~~~~~~l~~aa~~~-~v~r~i~~ss  111 (205)
T d1hdoa_          76 GTRNDLSPTTVMSEGARNIVAAMKAH-GVDKVVACTS  111 (205)
T ss_dssp             CCTTCCSCCCHHHHHHHHHHHHHHHH-TCCEEEEECC
T ss_pred             ccCCchhhhhhhHHHHHHHHHHHHhc-CCCeEEEEee
Confidence            742          1234556666664 4  7777764

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.52  E-value=0.014  Score=45.52  Aligned_cols=91  Identities=23%  Similarity=0.303  Sum_probs=64.3

Q ss_pred             CeEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHHhCc-ceEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457          185 STVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKKFGI-TDFINPATCGDKTVSQVIKEMTDGGADYCFECI  262 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~lga-~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~  262 (371)
                      ++|+|+|.|.+|...+..++..|. .+|++.+++++.++.+++.+. +.......           .......|+++-|+
T Consensus         2 k~I~IIG~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~-----------~~~~~~~dlIila~   70 (171)
T d2g5ca2           2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIA-----------KVEDFSPDFVMLSS   70 (171)
T ss_dssp             CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGG-----------GGGGTCCSEEEECS
T ss_pred             CEEEEEccCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhh-----------hhhccccccccccC
Confidence            369999999999998888888885 389999999999999999885 44443222           11112679999888


Q ss_pred             CChH---HHHHHHHHhhcCCceEEEECc
Q 017457          263 GLTS---VMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       263 g~~~---~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      ....   .+..+.+.++++ ..+++++.
T Consensus        71 p~~~~~~vl~~l~~~~~~~-~ii~d~~s   97 (171)
T d2g5ca2          71 PVRTFREIAKKLSYILSED-ATVTDQGS   97 (171)
T ss_dssp             CHHHHHHHHHHHHHHSCTT-CEEEECCS
T ss_pred             Cchhhhhhhhhhhcccccc-cccccccc
Confidence            8554   234445556665 66666664

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=96.51  E-value=0.01  Score=49.53  Aligned_cols=100  Identities=17%  Similarity=0.211  Sum_probs=61.9

Q ss_pred             CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhHHHHH----HHhCcce-EE--cCCCCCCccHHHHHHHhhC--C
Q 017457          185 STVAIFGL-GAVGLAVAEGARLNRASKIIGV-DINPEKFEIG----KKFGITD-FI--NPATCGDKTVSQVIKEMTD--G  253 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~-~~~~~~~~~~----~~lga~~-v~--~~~~~~~~~~~~~i~~~~~--g  253 (371)
                      ..|||+|+ +++|.+.++.+...|+ +|+++ .+++++.+.+    ++.|.+. .+  |-.+  .++..+.+.+...  |
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g   78 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK--EADVEAMMKTAIDAWG   78 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTS--HHHHHHHHHHHHHHSS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCC--HHHHHHHHHHHHHHcC
Confidence            35788887 9999999999999999 88776 4566655544    3355432 22  3222  1222222232222  3


Q ss_pred             CcCEEEECCCChH-------------------------HHHHHHHHhhc-CCceEEEECc
Q 017457          254 GADYCFECIGLTS-------------------------VMNDAFNSSRE-GWGKTVILGV  287 (371)
Q Consensus       254 g~d~vid~~g~~~-------------------------~~~~~~~~l~~-~~G~~v~~g~  287 (371)
                      ++|+++++.|...                         ..+.+++.|.. ++|+++.++.
T Consensus        79 ~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS  138 (244)
T d1edoa_          79 TIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIAS  138 (244)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             CCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcC
Confidence            7999999887511                         34556666532 2399999986

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=96.50  E-value=0.00053  Score=57.75  Aligned_cols=100  Identities=18%  Similarity=0.209  Sum_probs=68.5

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc---eEEcCCCCCCccHHHHH
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVI  247 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~---~v~~~~~~~~~~~~~~i  247 (371)
                      +....++++|++||=+|+|. |..+..+++..|+ +|++++.+++..+.+++    .|..   .+...+-   .++    
T Consensus        25 l~~~~~l~pg~~VLDiGCG~-G~~~~~la~~~~~-~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~---~~~----   95 (245)
T d1nkva_          25 LGRVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDA---AGY----   95 (245)
T ss_dssp             HHHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCC---TTC----
T ss_pred             HHHHcCCCCCCEEEEEcCCC-CHHHHHHHHhcCC-EEEEEecccchhhHHHHHHHHhhccccchhhhhHH---hhc----
Confidence            55678899999999999865 5667778888898 99999999987766554    4532   2222111   111    


Q ss_pred             HHhhCCCcCEEEECCC------ChHHHHHHHHHhhcCCceEEEEC
Q 017457          248 KEMTDGGADYCFECIG------LTSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       248 ~~~~~gg~d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                        ...+.||+|+..-.      -...+..+.+.|+|+ |+++...
T Consensus        96 --~~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPG-G~l~i~~  137 (245)
T d1nkva_          96 --VANEKCDVAACVGATWIAGGFAGAEELLAQSLKPG-GIMLIGE  137 (245)
T ss_dssp             --CCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEE-EEEEEEE
T ss_pred             --cccCceeEEEEEehhhccCCHHHHHHHHHHHcCcC-cEEEEEe
Confidence              12238999985321      234578889999998 9987753

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.48  E-value=0.0019  Score=45.39  Aligned_cols=82  Identities=15%  Similarity=0.199  Sum_probs=52.4

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh--HHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE--KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~--~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      +|++|+|+|.|..|+++++++...|+ +|++.+.+..  ..+.++. +....+....   ..   .+.     .+|.++-
T Consensus         4 ~~K~v~ViGlG~sG~s~a~~L~~~g~-~v~~~D~~~~~~~~~~~~~-~~~~~~~~~~---~~---~~~-----~~d~vi~   70 (93)
T d2jfga1           4 QGKNVVIIGLGLTGLSCVDFFLARGV-TPRVMDTRMTPPGLDKLPE-AVERHTGSLN---DE---WLM-----AADLIVA   70 (93)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHHHTTC-CCEEEESSSSCTTGGGSCT-TSCEEESBCC---HH---HHH-----HCSEEEE
T ss_pred             CCCEEEEEeECHHHHHHHHHHHHCCC-EEEEeeCCcCchhHHHHhh-ccceeecccc---hh---hhc-----cCCEEEE
Confidence            57899999999999999999999999 9999987443  2222222 2233333222   11   111     5789988


Q ss_pred             CCCChHHHHHHHHHhhcC
Q 017457          261 CIGLTSVMNDAFNSSREG  278 (371)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~  278 (371)
                      +.|-+. -+..+..+...
T Consensus        71 SPGi~~-~~~~~~~a~~~   87 (93)
T d2jfga1          71 SPGIAL-AHPSLSAAADA   87 (93)
T ss_dssp             CTTSCT-TSHHHHHHHHT
T ss_pred             CCCCCC-CCHHHHHHHHc
Confidence            777655 34444444443

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.47  E-value=0.0054  Score=52.79  Aligned_cols=101  Identities=15%  Similarity=0.199  Sum_probs=68.4

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcceEEcCCCCCCccHHHHHHHh
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITDFINPATCGDKTVSQVIKEM  250 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~~v~~~~~~~~~~~~~~i~~~  250 (371)
                      +.+..++++|++||=+|+|- |.++..+|+..|+ +|++++.+++..+.++    +.|....+....   .++     ..
T Consensus        53 ~~~~l~l~~G~~VLDiGCG~-G~~~~~~a~~~g~-~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~---~d~-----~~  122 (291)
T d1kpia_          53 ALDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRI---QGW-----EE  122 (291)
T ss_dssp             HHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHSCCSSCEEEEE---CCG-----GG
T ss_pred             HHHhcCCCCCCEEEEecCcc-hHHHHHHHHhcCc-ceeeccchHHHHHHHHHHHHhhccchhhhhhh---hcc-----cc
Confidence            45678999999999999864 4467788888999 9999999998766554    345332221111   121     12


Q ss_pred             hCCCcCEEEE-----CCCC----------hHHHHHHHHHhhcCCceEEEEC
Q 017457          251 TDGGADYCFE-----CIGL----------TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       251 ~~gg~d~vid-----~~g~----------~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      ..+.||.|+.     .++.          ...++.+.+.|+|+ |+++.-.
T Consensus       123 ~~~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~Lkpg-G~~~l~~  172 (291)
T d1kpia_         123 FDEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDD-GRMLLHT  172 (291)
T ss_dssp             CCCCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTT-CEEEEEE
T ss_pred             cccccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCC-CceEEEE
Confidence            2347998874     2322          23478899999998 9987644

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.45  E-value=0.0012  Score=57.85  Aligned_cols=104  Identities=13%  Similarity=0.207  Sum_probs=67.9

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCC-eEEEEcCChhHHHHHHH----hC-----------cceE--EcCC
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRAS-KIIGVDINPEKFEIGKK----FG-----------ITDF--INPA  236 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~-~Vi~~~~~~~~~~~~~~----lg-----------a~~v--~~~~  236 (371)
                      +....+++||++||=.|+|. |.+++.+|++.|.+ +|+.++.+++..+.+++    ++           .+.+  ...+
T Consensus        90 Il~~l~i~pG~rVLE~GtGs-G~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~d  168 (324)
T d2b25a1          90 ILSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD  168 (324)
T ss_dssp             HHHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC
T ss_pred             HHHHhCCCCCCEEEEecccc-cHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEecc
Confidence            45668899999999999877 88889999988743 89999999988777654    21           1111  1111


Q ss_pred             CCCCccHHHHHHHhhCCCcCEEE-ECCCChHHHHHHHHHhhcCCceEEEEC
Q 017457          237 TCGDKTVSQVIKEMTDGGADYCF-ECIGLTSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       237 ~~~~~~~~~~i~~~~~gg~d~vi-d~~g~~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      -   .++.   ..+..+.+|.|| |...-...+..+.+.|+|+ |+++.+.
T Consensus       169 i---~~~~---~~~~~~~fD~V~LD~p~P~~~l~~~~~~LKpG-G~lv~~~  212 (324)
T d2b25a1         169 I---SGAT---EDIKSLTFDAVALDMLNPHVTLPVFYPHLKHG-GVCAVYV  212 (324)
T ss_dssp             T---TCCC----------EEEEEECSSSTTTTHHHHGGGEEEE-EEEEEEE
T ss_pred             h---hhcc---cccCCCCcceEeecCcCHHHHHHHHHHhccCC-CEEEEEe
Confidence            1   1111   111223688877 5432223588999999998 9998875

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.42  E-value=0.00058  Score=57.20  Aligned_cols=98  Identities=16%  Similarity=0.209  Sum_probs=61.2

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCC---CccHHHHHHHh-hCCCcCEE
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG---DKTVSQVIKEM-TDGGADYC  258 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~---~~~~~~~i~~~-~~gg~d~v  258 (371)
                      +.+|||+|+ +++|.+.++.+...|+ +|+.+++++++..     .....+..+...   .....+.+... ..+.+|++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~-~V~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~l   75 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQA-----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   75 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTS-----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCchhcc-----cccceeccccCchhHHHHHHHHHHHHhcCCCeeEE
Confidence            457999998 9999999999999999 9999998765321     111111111100   01111122222 23478999


Q ss_pred             EECCCCh--------------------------HHHHHHHHHhhcCCceEEEECcc
Q 017457          259 FECIGLT--------------------------SVMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       259 id~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      +++.|..                          ...+..++.|+++ |+++.++..
T Consensus        76 innAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-g~Iv~isS~  130 (235)
T d1ooea_          76 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG-GLLQLTGAA  130 (235)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCG
T ss_pred             EECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccc-eEEEEeccH
Confidence            9988740                          1245666778887 999999863

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=96.35  E-value=0.0074  Score=49.91  Aligned_cols=100  Identities=18%  Similarity=0.240  Sum_probs=67.6

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcce--EEcCCCCCCccHHHHHH
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITD--FINPATCGDKTVSQVIK  248 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~--v~~~~~~~~~~~~~~i~  248 (371)
                      +...+++++|++||=+|+|. |..+..+++. +. +|++++.+++-.+.+++    .+.+.  ++..+.   .++     
T Consensus         8 l~~~~~~~~~~rILDiGcGt-G~~~~~la~~-~~-~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~---~~~-----   76 (234)
T d1xxla_           8 MIKTAECRAEHRVLDIGAGA-GHTALAFSPY-VQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTA---ESL-----   76 (234)
T ss_dssp             HHHHHTCCTTCEEEEESCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBT---TBC-----
T ss_pred             HHHHhCCCCCCEEEEeCCcC-cHHHHHHHHh-CC-eEEEEeCChhhhhhhhhhhccccccccccccccc---ccc-----
Confidence            55778999999999999876 7777777774 56 89999999887666543    34321  221111   111     


Q ss_pred             HhhCCCcCEEEECCC-----C-hHHHHHHHHHhhcCCceEEEEC
Q 017457          249 EMTDGGADYCFECIG-----L-TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       249 ~~~~gg~d~vid~~g-----~-~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      .+.++.||+|+.+-.     + ...++.+.+.|+|+ |+++...
T Consensus        77 ~~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~~~~~~  119 (234)
T d1xxla_          77 PFPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQD-GRFLLVD  119 (234)
T ss_dssp             CSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             cccccccceeeeeceeecccCHHHHHHHHHHeeCCC-cEEEEEE
Confidence            112347999985333     1 23588999999998 9887753

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=96.33  E-value=0.0047  Score=52.54  Aligned_cols=82  Identities=10%  Similarity=0.112  Sum_probs=51.4

Q ss_pred             CCCCeEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH---HhC-cceEEcCCCCCCccHHHHHHHhhC--
Q 017457          182 EVGSTVAIFGL-G--AVGLAVAEGARLNRASKIIGVDINPEKFEIGK---KFG-ITDFINPATCGDKTVSQVIKEMTD--  252 (371)
Q Consensus       182 ~~g~~VLI~G~-g--~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~---~lg-a~~v~~~~~~~~~~~~~~i~~~~~--  252 (371)
                      -+|+++||+|+ |  ++|.+.++.+...|+ +|+.++++++..+.++   +.+ ...+...+-.++.+..+.+.+...  
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga-~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL   81 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHc
Confidence            46999999986 5  799999999999999 9999998865333333   223 222222111112333333333322  


Q ss_pred             CCcCEEEECCCC
Q 017457          253 GGADYCFECIGL  264 (371)
Q Consensus       253 gg~d~vid~~g~  264 (371)
                      +.+|+++++.+.
T Consensus        82 g~id~lV~nag~   93 (274)
T d2pd4a1          82 GSLDFIVHSVAF   93 (274)
T ss_dssp             SCEEEEEECCCC
T ss_pred             CCCCeEEeeccc
Confidence            378999988774

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.32  E-value=0.0074  Score=51.68  Aligned_cols=98  Identities=13%  Similarity=0.158  Sum_probs=68.5

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCc-c--eEEcCCCCCCccHHHHH
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI-T--DFINPATCGDKTVSQVI  247 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga-~--~v~~~~~~~~~~~~~~i  247 (371)
                      +.+..++++|++||=+|+|- |.+++.+|+..|+ +|++++.+++..+++++    .|- +  .+..      .++    
T Consensus        54 ~~~~l~l~~G~~VLDiGCG~-G~~a~~~a~~~g~-~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~------~d~----  121 (285)
T d1kpga_          54 ALGKLGLQPGMTLLDVGCGW-GATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLL------AGW----  121 (285)
T ss_dssp             HHTTTTCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEE------SCG----
T ss_pred             HHHHcCCCCCCEEEEecCcc-hHHHHHHHhcCCc-ceEEEeccHHHHHHHHHHHHhhhhhhhhHHHH------hhh----
Confidence            45668899999999999876 6778889999999 99999999988777755    231 1  1211      121    


Q ss_pred             HHhhCCCcCEEEE-----CCCC---hHHHHHHHHHhhcCCceEEEEC
Q 017457          248 KEMTDGGADYCFE-----CIGL---TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       248 ~~~~~gg~d~vid-----~~g~---~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      +.+ ++.+|.++.     .++.   ...++.+.+.|+|+ |+++.-.
T Consensus       122 ~~~-~~~fD~i~si~~~eh~~~~~~~~~~~~~~r~Lkpg-G~~~l~~  166 (285)
T d1kpga_         122 EQF-DEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPAD-GVMLLHT  166 (285)
T ss_dssp             GGC-CCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTT-CEEEEEE
T ss_pred             hcc-cccccceeeehhhhhcCchhHHHHHHHHHhhcCCC-CcEEEEE
Confidence            111 347888764     3332   23478888999998 9987643

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.27  E-value=0.00072  Score=56.74  Aligned_cols=75  Identities=16%  Similarity=0.165  Sum_probs=50.3

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhC--CCcCEEE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD--GGADYCF  259 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~--gg~d~vi  259 (371)
                      +|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+..    ...|-.+  .++..+.+.+...  |++|+++
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~----~~~Dv~~--~~~v~~~~~~~~~~~g~iDiLV   78 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLFG----VEVDVTD--SDAVDRAFTAVEEHQGPVEVLV   78 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSEE----EECCTTC--HHHHHHHHHHHHHHHSSCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCcchhcCceE----EEEecCC--HHHHHHHHHHHHHhcCCceEEE
Confidence            6899999998 8999999999999999 99999988765443211    1223222  1222222222222  3799999


Q ss_pred             ECCCC
Q 017457          260 ECIGL  264 (371)
Q Consensus       260 d~~g~  264 (371)
                      ++.|.
T Consensus        79 nnAG~   83 (237)
T d1uzma1          79 SNAGL   83 (237)
T ss_dssp             EECSC
T ss_pred             eeecc
Confidence            98874

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.27  E-value=0.017  Score=44.59  Aligned_cols=97  Identities=16%  Similarity=0.246  Sum_probs=69.3

Q ss_pred             HHHHcC-CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCC
Q 017457          175 AWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG  253 (371)
Q Consensus       175 l~~~~~-~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g  253 (371)
                      +.+..+ .-.|++|+|.|-|-+|...++.++.+|+ +|++++..+-+.-.+.--|.. +.        .+.+.+     .
T Consensus        14 ~~r~t~~~l~Gk~v~V~GyG~iG~g~A~~~rg~G~-~V~v~e~dp~~al~A~~dG~~-v~--------~~~~a~-----~   78 (163)
T d1li4a1          14 IKRATDVMIAGKVAVVAGYGDVGKGCAQALRGFGA-RVIITEIDPINALQAAMEGYE-VT--------TMDEAC-----Q   78 (163)
T ss_dssp             HHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-EC--------CHHHHT-----T
T ss_pred             HHHHhCceecCCEEEEeccccccHHHHHHHHhCCC-eeEeeecccchhHHhhcCceE-ee--------ehhhhh-----h
Confidence            444333 5689999999999999999999999999 999999988664444433432 21        222221     2


Q ss_pred             CcCEEEECCCChHH-HHHHHHHhhcCCceEEEECc
Q 017457          254 GADYCFECIGLTSV-MNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       254 g~d~vid~~g~~~~-~~~~~~~l~~~~G~~v~~g~  287 (371)
                      ..|+++-++|.... -..-++.|+++ ..++..|.
T Consensus        79 ~adivvtaTGn~~vI~~eh~~~MKdg-aIL~N~Gh  112 (163)
T d1li4a1          79 EGNIFVTTTGCIDIILGRHFEQMKDD-AIVCNIGH  112 (163)
T ss_dssp             TCSEEEECSSCSCSBCHHHHTTCCTT-EEEEECSS
T ss_pred             hccEEEecCCCccchhHHHHHhccCC-eEEEEecc
Confidence            57999999997543 46778889886 66666664

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.23  E-value=0.0013  Score=54.40  Aligned_cols=98  Identities=13%  Similarity=0.163  Sum_probs=60.1

Q ss_pred             CCCCCCeEEEEcCChHHHHHHHHHHH---cCC---CeEEEEcCChhHHHHHHH---------hCcceEEcCCCCCCccHH
Q 017457          180 GVEVGSTVAIFGLGAVGLAVAEGARL---NRA---SKIIGVDINPEKFEIGKK---------FGITDFINPATCGDKTVS  244 (371)
Q Consensus       180 ~~~~g~~VLI~G~g~~G~~ai~la~~---~g~---~~Vi~~~~~~~~~~~~~~---------lga~~v~~~~~~~~~~~~  244 (371)
                      .+++|++||.+|+|. |..++.+++.   .|.   .+|+.++..++-.+.+++         .+...+.-...    +..
T Consensus        77 ~l~~g~~VLeIGtGs-GY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~----d~~  151 (223)
T d1r18a_          77 HLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEG----DGR  151 (223)
T ss_dssp             TCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEES----CGG
T ss_pred             ccCCCCeEEEecCCC-CHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEec----ccc
Confidence            789999999999754 5555555554   342   279999988876655533         12222211111    111


Q ss_pred             HHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEE
Q 017457          245 QVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL  285 (371)
Q Consensus       245 ~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~  285 (371)
                      +.  ....+.||.++-+.+-....+.+++.|+++ |+++..
T Consensus       152 ~~--~~~~~~fD~Iiv~~a~~~~p~~l~~~Lk~g-G~lV~p  189 (223)
T d1r18a_         152 KG--YPPNAPYNAIHVGAAAPDTPTELINQLASG-GRLIVP  189 (223)
T ss_dssp             GC--CGGGCSEEEEEECSCBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             cc--cccccceeeEEEEeechhchHHHHHhcCCC-cEEEEE
Confidence            00  011227999886666555457889999998 998773

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=96.21  E-value=0.0088  Score=49.15  Aligned_cols=100  Identities=15%  Similarity=0.284  Sum_probs=67.7

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcce--EEcCCCCCCccHHHHHH
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITD--FINPATCGDKTVSQVIK  248 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~--v~~~~~~~~~~~~~~i~  248 (371)
                      +.+.++++++++||=+|+|. |..+..+++. |. +|++++.+++-.+.+++    .+.+.  ++..+-   .++     
T Consensus         7 ll~~~~l~~~~rVLDiGcG~-G~~~~~l~~~-~~-~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~---~~l-----   75 (231)
T d1vl5a_           7 LMQIAALKGNEEVLDVATGG-GHVANAFAPF-VK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDA---EQM-----   75 (231)
T ss_dssp             HHHHHTCCSCCEEEEETCTT-CHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC----CC-----
T ss_pred             HHHhcCCCCcCEEEEecccC-cHHHHHHHHh-CC-EEEEEECCHHHHhhhhhccccccccccccccccc---ccc-----
Confidence            55778999999999999873 6666667654 66 89999999987766643    34332  222221   111     


Q ss_pred             HhhCCCcCEEEECCC-----Ch-HHHHHHHHHhhcCCceEEEEC
Q 017457          249 EMTDGGADYCFECIG-----LT-SVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       249 ~~~~gg~d~vid~~g-----~~-~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      .+..+.||+|+..-.     +. ..+..+.+.|+|+ |+++...
T Consensus        76 ~~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~l~i~~  118 (231)
T d1vl5a_          76 PFTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKG-GQLLLVD  118 (231)
T ss_dssp             CSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             cccccccccccccccccccCCHHHHHHHHHHhcCCC-cEEEEEe
Confidence            122347999985422     22 3578999999998 9988764

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.20  E-value=0.003  Score=54.18  Aligned_cols=100  Identities=12%  Similarity=0.168  Sum_probs=66.8

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHHHHHHh
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEM  250 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~  250 (371)
                      +....++++|++||=+|+|. |.++..+++..|+ +|++++.+++..+++++    .|....+....   .++    ++ 
T Consensus        44 ~~~~l~l~~g~~VLDiGCG~-G~~a~~~a~~~g~-~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~---~d~----~~-  113 (280)
T d2fk8a1          44 NLDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLL---QGW----ED-  113 (280)
T ss_dssp             HHTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEE---SCG----GG-
T ss_pred             HHHHcCCCCCCEEEEecCCc-hHHHHHHHHhCce-eEEEecchHHHHHHHHHHHHhhccccchhhhh---hhh----hh-
Confidence            45667899999999999864 3456778888899 99999999998777655    34221111110   111    11 


Q ss_pred             hCCCcCEEEE-----CCCCh---HHHHHHHHHhhcCCceEEEE
Q 017457          251 TDGGADYCFE-----CIGLT---SVMNDAFNSSREGWGKTVIL  285 (371)
Q Consensus       251 ~~gg~d~vid-----~~g~~---~~~~~~~~~l~~~~G~~v~~  285 (371)
                      ..+.+|.|+.     .++..   ..++.+.+.|+|+ |+++.-
T Consensus       114 ~~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~Lkpg-G~~~i~  155 (280)
T d2fk8a1         114 FAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPAD-GRMTVQ  155 (280)
T ss_dssp             CCCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTT-CEEEEE
T ss_pred             hccchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCC-ceEEEE
Confidence            1347898863     23322   3478889999998 998764

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.17  E-value=0.0039  Score=52.50  Aligned_cols=100  Identities=9%  Similarity=0.046  Sum_probs=64.8

Q ss_pred             eEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCc----ceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          186 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI----TDFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       186 ~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga----~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      ++||+|+ +++|.+.+..+...|+ +|++++++.++.+.++..+.    ..+.+.++  .+.+.+.+.+.. |+.|++++
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~--~~~~~~~~~~~~-G~iDiLVn   77 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKPMSEQE--PAELIEAVTSAY-GQVDVLVS   77 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEECCCCS--HHHHHHHHHHHH-SCCCEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhhhCcEEEeccCCHHH--HHHHHHHHHHHc-CCCCEEEE
Confidence            7899998 8999999988888999 99999998888877765432    22322221  122333333333 37999997


Q ss_pred             CCCCh--------------------------HHHHHHHHHhhc-CCceEEEECccC
Q 017457          261 CIGLT--------------------------SVMNDAFNSSRE-GWGKTVILGVEM  289 (371)
Q Consensus       261 ~~g~~--------------------------~~~~~~~~~l~~-~~G~~v~~g~~~  289 (371)
                      +.|..                          ...+.+++.|.. ++|++|.++...
T Consensus        78 NAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~  133 (252)
T d1zmta1          78 NDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSAT  133 (252)
T ss_dssp             ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCST
T ss_pred             CCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccc
Confidence            65531                          023455555544 238999998643

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=96.17  E-value=0.016  Score=48.25  Aligned_cols=101  Identities=14%  Similarity=0.115  Sum_probs=63.2

Q ss_pred             eEEEEcC-ChHHHHHHHHHHHcCCC------eEEEEcCChhHHHHHHH----hCcce-EE--cCCCCCCccHHHHHHHhh
Q 017457          186 TVAIFGL-GAVGLAVAEGARLNRAS------KIIGVDINPEKFEIGKK----FGITD-FI--NPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       186 ~VLI~G~-g~~G~~ai~la~~~g~~------~Vi~~~~~~~~~~~~~~----lga~~-v~--~~~~~~~~~~~~~i~~~~  251 (371)
                      .|||+|+ +++|.+.+..+...|++      .|+..++++++.+.+.+    .|... .+  |-.+  .++..+.+.+..
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~--~~~v~~~~~~~~   80 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISD--MADVRRLTTHIV   80 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTS--HHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHH
Confidence            4688998 99999988888888883      28889999888766532    44321 22  3222  122222222222


Q ss_pred             C--CCcCEEEECCCCh-------------------------HHHHHHHHHhhc-CCceEEEECcc
Q 017457          252 D--GGADYCFECIGLT-------------------------SVMNDAFNSSRE-GWGKTVILGVE  288 (371)
Q Consensus       252 ~--gg~d~vid~~g~~-------------------------~~~~~~~~~l~~-~~G~~v~~g~~  288 (371)
                      .  |.+|+++++.|..                         ...+.+++.|.. ++|+++.++..
T Consensus        81 ~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~  145 (240)
T d2bd0a1          81 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSV  145 (240)
T ss_dssp             HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred             HHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEech
Confidence            2  3799999988851                         134566666643 23899998764

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=96.09  E-value=0.01  Score=49.85  Aligned_cols=83  Identities=13%  Similarity=0.171  Sum_probs=52.5

Q ss_pred             CCCCCeEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHHHHHHhhCC
Q 017457          181 VEVGSTVAIFGL-G--AVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTDG  253 (371)
Q Consensus       181 ~~~g~~VLI~G~-g--~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~~~g  253 (371)
                      .-+|+++||+|+ +  ++|.+.+..+...|+ +|+.++++++..+.+++    .+....+..+..+..+..+...+....
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKV   80 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhc
Confidence            347899999987 6  688888888889999 89999988765555433    343333332221112223333333322


Q ss_pred             --CcCEEEECCCC
Q 017457          254 --GADYCFECIGL  264 (371)
Q Consensus       254 --g~d~vid~~g~  264 (371)
                        ..|+.+++.+.
T Consensus        81 ~~~~d~~v~~a~~   93 (258)
T d1qsga_          81 WPKFDGFVHSIGF   93 (258)
T ss_dssp             CSSEEEEEECCCC
T ss_pred             ccccceEEEeecc
Confidence              77999987653

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.09  E-value=0.043  Score=42.27  Aligned_cols=87  Identities=15%  Similarity=0.223  Sum_probs=63.3

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCCh
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT  265 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~~  265 (371)
                      +|-|+|.|.+|...+.-+...|. +|++.++++++.+.+.+.++.. .       .+..+.++     ..|++|-|+.++
T Consensus         2 kIgiIGlG~MG~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~-~-------~~~~e~~~-----~~d~ii~~v~~~   67 (161)
T d1vpda2           2 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAET-A-------STAKAIAE-----QCDVIITMLPNS   67 (161)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE-C-------SSHHHHHH-----HCSEEEECCSSH
T ss_pred             EEEEEehhHHHHHHHHHHHHCCC-eEEEEeCCcchhHHHHHhhhhh-c-------ccHHHHHh-----CCCeEEEEcCCH
Confidence            47889999999998887778899 9999999999999998887642 2       22333333     479999999876


Q ss_pred             HHHHHH-------HHHhhcCCceEEEECc
Q 017457          266 SVMNDA-------FNSSREGWGKTVILGV  287 (371)
Q Consensus       266 ~~~~~~-------~~~l~~~~G~~v~~g~  287 (371)
                      ...+..       ...++++ ..+++++.
T Consensus        68 ~~v~~v~~~~~~~~~~~~~g-~iiid~sT   95 (161)
T d1vpda2          68 PHVKEVALGENGIIEGAKPG-TVLIDMSS   95 (161)
T ss_dssp             HHHHHHHHSTTCHHHHCCTT-CEEEECSC
T ss_pred             HHHHHHHhCCcchhhccCCC-CEEEECCC
Confidence            655543       3345554 56777664

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.07  E-value=0.011  Score=49.39  Aligned_cols=47  Identities=30%  Similarity=0.241  Sum_probs=39.8

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCc
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGI  229 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga  229 (371)
                      -+|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+ ++++.
T Consensus         3 lkGKvalITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~   51 (248)
T d2o23a1           3 VKGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGN   51 (248)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCC
Confidence            36899999998 9999999999999999 999999988877654 44654

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.02  E-value=0.0037  Score=51.83  Aligned_cols=100  Identities=18%  Similarity=0.209  Sum_probs=66.2

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcce--EEcCCCCCCccHHHHHHHhhCCCcCEE
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD--FINPATCGDKTVSQVIKEMTDGGADYC  258 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~--v~~~~~~~~~~~~~~i~~~~~gg~d~v  258 (371)
                      ..+|.+||-+|+|. |..+..+++..+. +|++++.+++-.+.+++.....  -+....   .+.......+..+.||.+
T Consensus        51 ~~~g~~VLdIGcG~-G~~a~~~a~~~~~-~v~~id~s~~~~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~fD~i  125 (229)
T d1zx0a1          51 SSKGGRVLEVGFGM-AIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLK---GLWEDVAPTLPDGHFDGI  125 (229)
T ss_dssp             TTTCEEEEEECCTT-SHHHHHHHTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEE---SCHHHHGGGSCTTCEEEE
T ss_pred             ccCCCeEEEeeccc-hHHHHHHHHcCCC-eEEEeCCCHHHHHHHHHHhhhccccccccc---ccccccccccccccccce
Confidence            46789999999866 6777888887666 8999999999888887643210  111111   233333334444578888


Q ss_pred             E-ECCCCh----------HHHHHHHHHhhcCCceEEEEC
Q 017457          259 F-ECIGLT----------SVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       259 i-d~~g~~----------~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      + |.....          ..+..+.+.|+|+ |.++.+.
T Consensus       126 ~fD~~~~~~~~~~~~~~~~~~~~~~r~LkpG-G~~~~~~  163 (229)
T d1zx0a1         126 LYDTYPLSEETWHTHQFNFIKNHAFRLLKPG-GVLTYCN  163 (229)
T ss_dssp             EECCCCCBGGGTTTHHHHHHHHTHHHHEEEE-EEEEECC
T ss_pred             eecccccccccccccCHHHHHHHHHHHcCCC-cEEEEEe
Confidence            5 654431          1356788999998 9988654

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.01  E-value=0.0074  Score=48.13  Aligned_cols=100  Identities=14%  Similarity=0.175  Sum_probs=64.9

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCc-ce--EEcCCCCCCccHHHHH
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI-TD--FINPATCGDKTVSQVI  247 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga-~~--v~~~~~~~~~~~~~~i  247 (371)
                      +....++++|++||=+|+|. |..++.+|+. +. +|++++.+++..+.+++    .|. +.  ++.      .+..+..
T Consensus        25 il~~l~~~~g~~VLDiGcGs-G~~s~~lA~~-~~-~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~------gda~~~~   95 (186)
T d1l3ia_          25 IMCLAEPGKNDVAVDVGCGT-GGVTLELAGR-VR-RVYAIDRNPEAISTTEMNLQRHGLGDNVTLME------GDAPEAL   95 (186)
T ss_dssp             HHHHHCCCTTCEEEEESCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHTTCCTTEEEEE------SCHHHHH
T ss_pred             HHHhcCCCCCCEEEEEECCe-Eccccccccc-ce-EEEEecCCHHHHHHHHHHHHHcCCCcceEEEE------Cchhhcc
Confidence            34557899999999998754 4555666654 44 99999999988777654    553 22  232      2322222


Q ss_pred             HHhhCCCcCEEEECCCC---hHHHHHHHHHhhcCCceEEEEC
Q 017457          248 KEMTDGGADYCFECIGL---TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       248 ~~~~~gg~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      .  ....+|+|+...+.   ...++.+.+.|+++ |+++...
T Consensus        96 ~--~~~~~D~v~~~~~~~~~~~~~~~~~~~Lkpg-G~lvi~~  134 (186)
T d1l3ia_          96 C--KIPDIDIAVVGGSGGELQEILRIIKDKLKPG-GRIIVTA  134 (186)
T ss_dssp             T--TSCCEEEEEESCCTTCHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             c--ccCCcCEEEEeCccccchHHHHHHHHHhCcC-CEEEEEe
Confidence            1  12379999855432   23467888899998 9887653

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.00  E-value=0.0094  Score=49.85  Aligned_cols=77  Identities=13%  Similarity=0.217  Sum_probs=48.5

Q ss_pred             CeEEEEcC-ChHHHHHHHHH-H--HcCCCeEEEEcCChhHHHHHHHh---Ccc-eEE--cCCCCCCccHHHHHH---Hhh
Q 017457          185 STVAIFGL-GAVGLAVAEGA-R--LNRASKIIGVDINPEKFEIGKKF---GIT-DFI--NPATCGDKTVSQVIK---EMT  251 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la-~--~~g~~~Vi~~~~~~~~~~~~~~l---ga~-~v~--~~~~~~~~~~~~~i~---~~~  251 (371)
                      ++|||+|+ +++|.+.++.+ +  ..|+ +|+++++++++.+.++++   +.. .++  |-.+  .++..+.+.   ...
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~--~~~v~~~~~~i~~~~   79 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRN--FDAYDKLVADIEGVT   79 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTC--GGGHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHhcCCcEEEEEEEecc--HHHHHHHHhhhHHHh
Confidence            68999998 99999877544 3  3588 999999998876665432   222 222  3222  123333333   233


Q ss_pred             C-CCcCEEEECCCC
Q 017457          252 D-GGADYCFECIGL  264 (371)
Q Consensus       252 ~-gg~d~vid~~g~  264 (371)
                      . +.+|+++++.|.
T Consensus        80 ~~~~iDiLvnNAg~   93 (248)
T d1snya_          80 KDQGLNVLFNNAGI   93 (248)
T ss_dssp             GGGCCSEEEECCCC
T ss_pred             hcCCcceEEeeccc
Confidence            3 379999998763

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=95.89  E-value=0.0022  Score=54.99  Aligned_cols=102  Identities=14%  Similarity=0.064  Sum_probs=68.8

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc---eEEcCCCCCCccHHHHH
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVI  247 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~---~v~~~~~~~~~~~~~~i  247 (371)
                      +.....+.++.+||=+|+|. |..+..+++..|+ +|++++.++...+.+++    .|..   .++..+-   .++    
T Consensus        59 l~~~~~l~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~---~~l----  129 (282)
T d2o57a1          59 LAMTGVLQRQAKGLDLGAGY-GGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSF---LEI----  129 (282)
T ss_dssp             HHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCT---TSC----
T ss_pred             HHHhcCCCCCCEEEEeCCCC-cHHHhhhhccCCc-EEEEEeccchhhhhhhccccccccccccccccccc---ccc----
Confidence            33456789999999999875 6677788888898 99999999987766654    3432   2232211   111    


Q ss_pred             HHhhCCCcCEEEECCC-----C-hHHHHHHHHHhhcCCceEEEECc
Q 017457          248 KEMTDGGADYCFECIG-----L-TSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       248 ~~~~~gg~d~vid~~g-----~-~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                       .+..+.||+|+..-.     + ...+..+.+.|+|+ |+++....
T Consensus       130 -~~~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~Lkpg-G~l~~~~~  173 (282)
T d2o57a1         130 -PCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPR-GVMAITDP  173 (282)
T ss_dssp             -SSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             -cccccccchhhccchhhhccCHHHHHHHHHHhcCCC-cEEEEEEe
Confidence             112237999985322     2 23578999999998 99887653

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.77  E-value=0.011  Score=48.82  Aligned_cols=107  Identities=11%  Similarity=0.005  Sum_probs=66.3

Q ss_pred             HHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcc-------------eEEcCCCCCCccH
Q 017457          177 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-------------DFINPATCGDKTV  243 (371)
Q Consensus       177 ~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~-------------~v~~~~~~~~~~~  243 (371)
                      ....+.++.+||..|+|. |..+..||+ .|+ +|++++.+++..+.+++.-..             ...........-+
T Consensus        39 ~~l~~~~~~rvLd~GCG~-G~~a~~LA~-~G~-~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  115 (229)
T d2bzga1          39 TFLKGKSGLRVFFPLCGK-AVEMKWFAD-RGH-SVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLY  115 (229)
T ss_dssp             HHHTTCCSCEEEETTCTT-CTHHHHHHH-TTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEE
T ss_pred             HhcCCCCCCEEEEeCCCC-cHHHHHHHh-CCC-cEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEE
Confidence            445678899999999876 777777876 699 999999999998877653211             0000000000000


Q ss_pred             HHHHHHhh---CCCcCEEEECCCC--------hHHHHHHHHHhhcCCceEEEECc
Q 017457          244 SQVIKEMT---DGGADYCFECIGL--------TSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       244 ~~~i~~~~---~gg~d~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      ...+.++.   .+.+|+|+++..-        ...+..+.+.|+|+ |+++....
T Consensus       116 ~~d~~~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~Lkpg-G~~~l~~~  169 (229)
T d2bzga1         116 CCSIFDLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKK-FQYLLCVL  169 (229)
T ss_dssp             ESCGGGGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEE-EEEEEEEE
T ss_pred             EcchhhccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCc-ceEEEEEc
Confidence            00011121   2268999986531        23467899999998 98766653

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.71  E-value=0.012  Score=47.40  Aligned_cols=81  Identities=22%  Similarity=0.214  Sum_probs=59.8

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      -.|++|+|.|.|.+|..+++++...|+ +|++.+.+.++.+....+|.+.+ ..+     +       +..-.+|+.+=|
T Consensus        25 L~gk~v~IqG~G~VG~~~A~~L~~~Ga-kvvv~d~d~~~~~~~~~~g~~~~-~~~-----~-------~~~~~~DI~iPc   90 (201)
T d1c1da1          25 LDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHTAV-ALE-----D-------VLSTPCDVFAPC   90 (201)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC-CGG-----G-------GGGCCCSEEEEC
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEecchHHHHHHHHhhccccc-Ccc-----c-------cccccceeeecc
Confidence            478999999999999999999999999 99999999999998888887533 211     1       112268888865


Q ss_pred             CCChHHHHHHHHHhh
Q 017457          262 IGLTSVMNDAFNSSR  276 (371)
Q Consensus       262 ~g~~~~~~~~~~~l~  276 (371)
                      ..+...-....+.++
T Consensus        91 A~~~~I~~~~a~~i~  105 (201)
T d1c1da1          91 AMGGVITTEVARTLD  105 (201)
T ss_dssp             SCSCCBCHHHHHHCC
T ss_pred             cccccccHHHHhhhh
Confidence            444332345555554

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.58  E-value=0.049  Score=41.50  Aligned_cols=81  Identities=22%  Similarity=0.207  Sum_probs=55.6

Q ss_pred             eEEEEcCChHHHHHHH-HHHHcCCCeEEEEcCChhHHHHHHH-hCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCC
Q 017457          186 TVAIFGLGAVGLAVAE-GARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG  263 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~-la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g  263 (371)
                      +|.++|+|.+|.+.+. |.++-+. +|++.++++++.+.+.+ +|.. +.+..+    ..         ...|+||=++.
T Consensus         2 kI~fIG~G~MG~ai~~~l~~~~~~-~i~v~~r~~~~~~~l~~~~~~~-~~~~~~----~v---------~~~Div~lavk   66 (152)
T d1yqga2           2 NVYFLGGGNMAAAVAGGLVKQGGY-RIYIANRGAEKRERLEKELGVE-TSATLP----EL---------HSDDVLILAVK   66 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSC-EEEEECSSHHHHHHHHHHTCCE-EESSCC----CC---------CTTSEEEECSC
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCCC-cEEEEeCChhHHHHhhhhcccc-cccccc----cc---------cccceEEEecC
Confidence            5788999999998776 5555446 99999999999888765 5654 333222    11         14789998876


Q ss_pred             ChHHHHHHHHHhhcCCceEE
Q 017457          264 LTSVMNDAFNSSREGWGKTV  283 (371)
Q Consensus       264 ~~~~~~~~~~~l~~~~G~~v  283 (371)
                      -.. +...++.+.+. +.++
T Consensus        67 P~~-~~~v~~~l~~~-~~~v   84 (152)
T d1yqga2          67 PQD-MEAACKNIRTN-GALV   84 (152)
T ss_dssp             HHH-HHHHHTTCCCT-TCEE
T ss_pred             HHH-HHHhHHHHhhc-ccEE
Confidence            333 67777777765 5544

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.51  E-value=0.039  Score=45.61  Aligned_cols=96  Identities=15%  Similarity=0.257  Sum_probs=64.7

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh----Ccc-eEEcCCCCCCccHHHHHHH
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GIT-DFINPATCGDKTVSQVIKE  249 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l----ga~-~v~~~~~~~~~~~~~~i~~  249 (371)
                      +.......++++||=+|+|. |..+..+++ .|+ +|++++.+++-++.+++.    +.. .+...+          +.+
T Consensus        33 ~~~~~~~~~~~~iLDiGcGt-G~~~~~l~~-~~~-~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d----------~~~   99 (251)
T d1wzna1          33 IFKEDAKREVRRVLDLACGT-GIPTLELAE-RGY-EVVGLDLHEEMLRVARRKAKERNLKIEFLQGD----------VLE   99 (251)
T ss_dssp             HHHHTCSSCCCEEEEETCTT-CHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEESC----------GGG
T ss_pred             HHHHhcCCCCCEEEEeCCCC-Cccchhhcc-cce-EEEEEeeccccccccccccccccccchheehh----------hhh
Confidence            34445667788999999976 777777776 588 999999999887777653    321 222211          122


Q ss_pred             hhCC-CcCEEEECCCC------h---HHHHHHHHHhhcCCceEEE
Q 017457          250 MTDG-GADYCFECIGL------T---SVMNDAFNSSREGWGKTVI  284 (371)
Q Consensus       250 ~~~g-g~d~vid~~g~------~---~~~~~~~~~l~~~~G~~v~  284 (371)
                      +... .+|+|+...+.      +   ..++.+.++|+++ |.++.
T Consensus       100 l~~~~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~Lkpg-G~lii  143 (251)
T d1wzna1         100 IAFKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPG-GVFIT  143 (251)
T ss_dssp             CCCCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEE-EEEEE
T ss_pred             cccccccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCC-cEEEE
Confidence            2223 79999875432      1   2477889999998 98865

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=95.46  E-value=0.028  Score=46.20  Aligned_cols=107  Identities=20%  Similarity=0.244  Sum_probs=71.1

Q ss_pred             HHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHHHHHHh
Q 017457          176 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEM  250 (371)
Q Consensus       176 ~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~  250 (371)
                      ....+..+.++||-+|.+. |..++.+|+++.- .+|+.++.+++..+.+++    .|...-+....   .+..+.+.++
T Consensus        52 ~~L~~~~~~k~iLEiGT~~-GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~---g~a~~~L~~l  127 (227)
T d1susa1          52 SMLLKLINAKNTMEIGVYT-GYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFRE---GPALPVLDEM  127 (227)
T ss_dssp             HHHHHHHTCCEEEEECCGG-GHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEE---SCHHHHHHHH
T ss_pred             HHHHHhcCCCcEEEecchh-hhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeee---hHHHHHHHHH
Confidence            3445567788999998744 7888888887642 299999999987776654    45432222222   3445555554


Q ss_pred             -----hCCCcCEEE-ECCCCh--HHHHHHHHHhhcCCceEEEECc
Q 017457          251 -----TDGGADYCF-ECIGLT--SVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       251 -----~~gg~d~vi-d~~g~~--~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                           ..+.||.|| |+--..  ..++.+++.|+++ |.++.=..
T Consensus       128 ~~~~~~~~~fD~iFiDa~k~~y~~~~e~~~~ll~~g-Giii~DNv  171 (227)
T d1susa1         128 IKDEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVG-GVIGYDNT  171 (227)
T ss_dssp             HHCGGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTT-CCEEEETT
T ss_pred             HhccccCCceeEEEeccchhhhHHHHHHHHhhcCCC-cEEEEccC
Confidence                 233799998 654432  3478999999997 88776543

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.45  E-value=0.016  Score=47.67  Aligned_cols=102  Identities=17%  Similarity=0.187  Sum_probs=66.7

Q ss_pred             HHcCCCCCCeEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHHh----CcceEEcCCCCCCccHHHHHHHhh
Q 017457          177 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKKF----GITDFINPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       177 ~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~l----ga~~v~~~~~~~~~~~~~~i~~~~  251 (371)
                      ....++||++||=+|+|. |..+..+|+..|- .+|++++.+++..+.+++.    +....+..+.   ... +... ..
T Consensus        67 ~~l~i~pG~~VLDlGaGs-G~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~---~~~-~~~~-~~  140 (227)
T d1g8aa_          67 KNFPIKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDA---TKP-EEYR-AL  140 (227)
T ss_dssp             CCCCCCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCT---TCG-GGGT-TT
T ss_pred             cccccCCCCEEEEeccCC-CHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEEC---CCc-cccc-cc
Confidence            345789999999999877 8888889998763 3899999999887777552    2211221111   111 1111 11


Q ss_pred             CCCcCEEEECCCCh----HHHHHHHHHhhcCCceEEEE
Q 017457          252 DGGADYCFECIGLT----SVMNDAFNSSREGWGKTVIL  285 (371)
Q Consensus       252 ~gg~d~vid~~g~~----~~~~~~~~~l~~~~G~~v~~  285 (371)
                      ...+|+++......    ..+..+.+.|+++ |.++.+
T Consensus       141 ~~~vD~i~~d~~~~~~~~~~l~~~~~~Lkpg-G~lvi~  177 (227)
T d1g8aa_         141 VPKVDVIFEDVAQPTQAKILIDNAEVYLKRG-GYGMIA  177 (227)
T ss_dssp             CCCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ccceEEEEEEccccchHHHHHHHHHHhcccC-CeEEEE
Confidence            12678888544422    2477888899998 988765

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=95.41  E-value=0.032  Score=42.87  Aligned_cols=91  Identities=20%  Similarity=0.296  Sum_probs=67.7

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      +-.|++++|.|=|-+|.-.++-++.+|+ +|++++.++-+.-++.--|.. +.        ...+.+     ...|+++-
T Consensus        20 ~laGk~vvV~GYG~vGrG~A~~~rg~Ga-~V~V~E~DPi~alqA~mdGf~-v~--------~~~~a~-----~~aDi~vT   84 (163)
T d1v8ba1          20 LISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGFN-VV--------TLDEIV-----DKGDFFIT   84 (163)
T ss_dssp             CCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTCE-EC--------CHHHHT-----TTCSEEEE
T ss_pred             eecCCEEEEecccccchhHHHHHHhCCC-EEEEEecCchhhHHHHhcCCc-cC--------chhHcc-----ccCcEEEE
Confidence            5789999999999999999999999999 999999998554333333332 22        222222     26899999


Q ss_pred             CCCChHH-HHHHHHHhhcCCceEEEECc
Q 017457          261 CIGLTSV-MNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       261 ~~g~~~~-~~~~~~~l~~~~G~~v~~g~  287 (371)
                      ++|.... -..-++.|+.+ ..++..|.
T Consensus        85 aTGn~~vI~~~h~~~MKdg-aIl~N~GH  111 (163)
T d1v8ba1          85 CTGNVDVIKLEHLLKMKNN-AVVGNIGH  111 (163)
T ss_dssp             CCSSSSSBCHHHHTTCCTT-CEEEECSS
T ss_pred             cCCCCccccHHHHHHhhCC-eEEEeccc
Confidence            9998763 45678889986 77777765

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.37  E-value=0.042  Score=44.03  Aligned_cols=87  Identities=17%  Similarity=0.121  Sum_probs=60.0

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  262 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~  262 (371)
                      .|++|.|+|.|.+|...+++++..|+ +|++.++.......  ..+..    .     .++.+.+.     ..|+++.+.
T Consensus        42 ~gk~vgIiG~G~IG~~va~~l~~fg~-~V~~~d~~~~~~~~--~~~~~----~-----~~l~~~l~-----~sDii~~~~  104 (197)
T d1j4aa1          42 RDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDIFRNPELE--KKGYY----V-----DSLDDLYK-----QADVISLHV  104 (197)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHHHH--HTTCB----C-----SCHHHHHH-----HCSEEEECS
T ss_pred             cCCeEEEecccccchhHHHhHhhhcc-cccccCcccccccc--cceee----e-----cccccccc-----ccccccccC
Confidence            58899999999999999999999999 99999876543222  11211    1     23433333     378888776


Q ss_pred             CChH-----HHHHHHHHhhcCCceEEEECc
Q 017457          263 GLTS-----VMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       263 g~~~-----~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      +...     .-...++.|+++ ..+|..+.
T Consensus       105 plt~~T~~li~~~~l~~mk~~-a~lIN~sR  133 (197)
T d1j4aa1         105 PDVPANVHMINDESIAKMKQD-VVIVNVSR  133 (197)
T ss_dssp             CCCGGGTTCBSHHHHHHSCTT-EEEEECSC
T ss_pred             CccccccccccHHHHhhhCCc-cEEEecCc
Confidence            5321     125678889887 78887764

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.34  E-value=0.03  Score=47.79  Aligned_cols=97  Identities=18%  Similarity=0.213  Sum_probs=66.2

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhC---------cc-eEEcCCCCCCccHHHHHHHhh
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG---------IT-DFINPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lg---------a~-~v~~~~~~~~~~~~~~i~~~~  251 (371)
                      ...++|||+|+|. |.++-.+++..+..+|.+++.+++=.+.++++-         .. .++.      .+-.+.+++..
T Consensus        79 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~------~Da~~~l~~~~  151 (290)
T d1xj5a_          79 PNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVI------GDGVAFLKNAA  151 (290)
T ss_dssp             SCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEE------SCHHHHHHTSC
T ss_pred             CCCcceEEecCCc-hHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEE------ccHHHHHhhcc
Confidence            4568999998765 555557777777768999999998877776632         11 2222      24445555544


Q ss_pred             CCCcCEEE-ECCCC---------hHHHHHHHHHhhcCCceEEEEC
Q 017457          252 DGGADYCF-ECIGL---------TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       252 ~gg~d~vi-d~~g~---------~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      .+.+|++| |+...         ...++.+.++|+++ |.++.-.
T Consensus       152 ~~~yDvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~-Gi~v~q~  195 (290)
T d1xj5a_         152 EGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPG-GVVCTQA  195 (290)
T ss_dssp             TTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             ccCccEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCC-cEEEEec
Confidence            45899887 55431         23478899999998 9887754

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.32  E-value=0.012  Score=42.64  Aligned_cols=39  Identities=23%  Similarity=0.352  Sum_probs=33.5

Q ss_pred             CCCC-CeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhH
Q 017457          181 VEVG-STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK  220 (371)
Q Consensus       181 ~~~g-~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~  220 (371)
                      +.++ .+|.|+|+|.+|.+.++-|+.+|+ ++++.+++++.
T Consensus         7 ~~~~~~kigIlGgGQL~rMla~aA~~lG~-~v~v~d~~~~~   46 (111)
T d1kjqa2           7 LRPAATRVMLLGSGELGKEVAIECQRLGV-EVIAVDRYADA   46 (111)
T ss_dssp             TSTTCCEEEEESCSHHHHHHHHHHHTTTC-EEEEEESSTTC
T ss_pred             CCCCCCEEEEEeCCHHHHHHHHHHHHCCC-EEEEEcCCCCC
Confidence            3444 469999999999999999999999 99999987654

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.31  E-value=0.065  Score=40.84  Aligned_cols=85  Identities=12%  Similarity=0.159  Sum_probs=61.5

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCC
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL  264 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~  264 (371)
                      +|.++|+|.+|.+.+.-....|. ++++..++.++.+.+ +++|....        .+..+.+.     ..|+||=|+.-
T Consensus         2 kIg~IG~G~mG~al~~~l~~~~~-~i~v~~r~~~~~~~l~~~~g~~~~--------~~~~~~~~-----~~dvIilavkp   67 (152)
T d2ahra2           2 KIGIIGVGKMASAIIKGLKQTPH-ELIISGSSLERSKEIAEQLALPYA--------MSHQDLID-----QVDLVILGIKP   67 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHTTSSC-EEEEECSSHHHHHHHHHHHTCCBC--------SSHHHHHH-----TCSEEEECSCG
T ss_pred             EEEEEeccHHHHHHHHHHHhCCC-eEEEEcChHHhHHhhccccceeee--------chhhhhhh-----ccceeeeecch
Confidence            47889999999987776666687 899999999887776 55675432        12323322     58999988864


Q ss_pred             hHHHHHHHHHhhcCCceEEEEC
Q 017457          265 TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       265 ~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      .. +...++.+.++ ..++.+.
T Consensus        68 ~~-~~~vl~~l~~~-~~iis~~   87 (152)
T d2ahra2          68 QL-FETVLKPLHFK-QPIISMA   87 (152)
T ss_dssp             GG-HHHHHTTSCCC-SCEEECC
T ss_pred             Hh-HHHHhhhcccc-eeEeccc
Confidence            44 78888888876 7777664

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.31  E-value=0.0085  Score=51.44  Aligned_cols=98  Identities=16%  Similarity=0.081  Sum_probs=62.8

Q ss_pred             HcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh----Ccc-----eEEcCCCCCCccHHHHHH
Q 017457          178 VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GIT-----DFINPATCGDKTVSQVIK  248 (371)
Q Consensus       178 ~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l----ga~-----~v~~~~~~~~~~~~~~i~  248 (371)
                      ..+.+++++||=+|+|. |..++.+|+. |+ +|++++.+++-++.+++.    +..     ..+..     .++...-.
T Consensus        51 ~l~~~~~~~vLD~GcG~-G~~~~~la~~-g~-~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~  122 (292)
T d1xvaa_          51 LLRQHGCHRVLDVACGT-GVDSIMLVEE-GF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEE-----ANWLTLDK  122 (292)
T ss_dssp             HHHHTTCCEEEESSCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEE-----CCGGGHHH
T ss_pred             HhhhcCCCEEEEecCCC-cHHHHHHHHc-CC-eeeeccCchHHHHHHHHHHHhcccccccceeeeee-----cccccccc
Confidence            34456678999999876 7778888875 88 999999999887776542    111     11111     12211112


Q ss_pred             HhhCC-CcCEEEECCCC--------------hHHHHHHHHHhhcCCceEEE
Q 017457          249 EMTDG-GADYCFECIGL--------------TSVMNDAFNSSREGWGKTVI  284 (371)
Q Consensus       249 ~~~~g-g~d~vid~~g~--------------~~~~~~~~~~l~~~~G~~v~  284 (371)
                      ..... .+|.|+.....              ...++.+.+.|+|+ |.++.
T Consensus       123 ~~~~~~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~li~  172 (292)
T d1xvaa_         123 DVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPG-GLLVI  172 (292)
T ss_dssp             HSCCTTCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEE-EEEEE
T ss_pred             ccCCCCCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcC-cEEEE
Confidence            22233 89999864321              12478899999998 98876

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.28  E-value=0.12  Score=39.75  Aligned_cols=88  Identities=14%  Similarity=0.169  Sum_probs=59.7

Q ss_pred             CeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCC
Q 017457          185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL  264 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~  264 (371)
                      ++|.++|.|.+|...+.-+...|+ .|++.++++++.+.+...++...        .+..+.+.     ..|+++-|+..
T Consensus         2 ~kIg~IGlG~MG~~iA~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~--------~~~~e~~~-----~~diii~~v~~   67 (162)
T d3cuma2           2 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAAGASAA--------RSARDAVQ-----GADVVISMLPA   67 (162)
T ss_dssp             CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEEC--------SSHHHHHT-----SCSEEEECCSC
T ss_pred             CEEEEEEEHHHHHHHHHHHHHCCC-eEEEEECchhhhhhhhhhhcccc--------chhhhhcc-----ccCeeeecccc
Confidence            368899999999987777777899 99999999999998888775422        12222221     46788887776


Q ss_pred             hHHHHHH-------HHHhhcCCceEEEECc
Q 017457          265 TSVMNDA-------FNSSREGWGKTVILGV  287 (371)
Q Consensus       265 ~~~~~~~-------~~~l~~~~G~~v~~g~  287 (371)
                      .......       ...+.++ -.+++++.
T Consensus        68 ~~~~~~v~~~~~~~~~~l~~g-~iiid~st   96 (162)
T d3cuma2          68 SQHVEGLYLDDDGLLAHIAPG-TLVLECST   96 (162)
T ss_dssp             HHHHHHHHHSTTCHHHHSCTT-CEEEECSC
T ss_pred             hhhHHHHHhccccccccCCCC-CEEEECCC
Confidence            6544433       3334454 55666654

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.22  E-value=0.028  Score=45.54  Aligned_cols=94  Identities=16%  Similarity=0.180  Sum_probs=62.0

Q ss_pred             CCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eEEcCCCCCCccHHHHHHHhhCCC
Q 017457          180 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTDGG  254 (371)
Q Consensus       180 ~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~~~~~~~~~~~~~~i~~~~~gg  254 (371)
                      -++++.+||=+|+|. |..+..+++ .|. +|++++.+++..+.+++    .+.. ..+..+.   .++     ....+.
T Consensus        34 ~l~~~~~ILDiGcG~-G~~~~~la~-~~~-~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~---~~l-----~~~~~~  102 (226)
T d1ve3a1          34 YMKKRGKVLDLACGV-GGFSFLLED-YGF-EVVGVDISEDMIRKAREYAKSRESNVEFIVGDA---RKL-----SFEDKT  102 (226)
T ss_dssp             SCCSCCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCT---TSC-----CSCTTC
T ss_pred             hcCCCCEEEEECCCc-chhhhhHhh-hhc-ccccccccccchhhhhhhhcccccccccccccc---ccc-----cccCcC
Confidence            367889999999876 777788887 477 99999999988877754    3321 2222211   111     111237


Q ss_pred             cCEEEECCC-----Ch---HHHHHHHHHhhcCCceEEEE
Q 017457          255 ADYCFECIG-----LT---SVMNDAFNSSREGWGKTVIL  285 (371)
Q Consensus       255 ~d~vid~~g-----~~---~~~~~~~~~l~~~~G~~v~~  285 (371)
                      +|+|+....     ..   ..++.+.+.|+|+ |+++..
T Consensus       103 fD~I~~~~~l~~~~~~d~~~~l~~i~~~Lkpg-G~lii~  140 (226)
T d1ve3a1         103 FDYVIFIDSIVHFEPLELNQVFKEVRRVLKPS-GKFIMY  140 (226)
T ss_dssp             EEEEEEESCGGGCCHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ceEEEEecchhhCChhHHHHHHHHHHHHcCcC-cEEEEE
Confidence            999885322     11   2477889999998 987654

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=95.20  E-value=0.017  Score=50.54  Aligned_cols=46  Identities=26%  Similarity=0.199  Sum_probs=39.1

Q ss_pred             CCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 017457          180 GVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK  226 (371)
Q Consensus       180 ~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~  226 (371)
                      -+++|++|||+|+ |-+|...+..+...|+ +|+++.++.++.+.++.
T Consensus         7 ~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~-~V~~~vR~~~~~~~~~~   53 (342)
T d1y1pa1           7 VLPEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQK   53 (342)
T ss_dssp             SSCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH
T ss_pred             CCCCcCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCchhHHHHHH
Confidence            4678999999998 9999999988888899 99999988877666543

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.10  E-value=0.074  Score=47.47  Aligned_cols=106  Identities=16%  Similarity=0.183  Sum_probs=67.9

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh-----------C----cceEEcCCCCC
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-----------G----ITDFINPATCG  239 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l-----------g----a~~v~~~~~~~  239 (371)
                      +.+..++++|+++|=+|+|. |..+.++|+..|+.+|++++.++...+.+++.           |    .........+.
T Consensus       208 Il~~l~Lkpgd~fLDLGCG~-G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~~~f~  286 (406)
T d1u2za_         208 VYQQCQLKKGDTFMDLGSGV-GNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFV  286 (406)
T ss_dssp             HHHHTTCCTTCEEEEESCTT-SHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCST
T ss_pred             HHHHhCCCCCCEEEeCCCCC-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeeeechh
Confidence            45678899999999889876 88999999999876899999998876666432           1    11111111111


Q ss_pred             CccHHHHHHHhhCCCcCEEEE-CCC-Ch---HHHHHHHHHhhcCCceEEEEC
Q 017457          240 DKTVSQVIKEMTDGGADYCFE-CIG-LT---SVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       240 ~~~~~~~i~~~~~gg~d~vid-~~g-~~---~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      ..+..   ..... .+|+++- +.- .+   ..+..+++.|++| |+++..-
T Consensus       287 ~~~~~---d~~~~-~adVV~inn~~f~~~l~~~L~ei~r~LKPG-GrIVs~~  333 (406)
T d1u2za_         287 DNNRV---AELIP-QCDVILVNNFLFDEDLNKKVEKILQTAKVG-CKIISLK  333 (406)
T ss_dssp             TCHHH---HHHGG-GCSEEEECCTTCCHHHHHHHHHHHTTCCTT-CEEEESS
T ss_pred             hcccc---ccccc-cceEEEEecccCchHHHHHHHHHHHhcCCC-cEEEEec
Confidence            11221   11111 5788873 221 22   2467788899998 9998764

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.09  E-value=0.028  Score=45.71  Aligned_cols=73  Identities=16%  Similarity=0.068  Sum_probs=46.9

Q ss_pred             CeEEEEcC-ChHHHHHHHHHHHcCCC-eEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457          185 STVAIFGL-GAVGLAVAEGARLNRAS-KIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  262 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la~~~g~~-~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~  262 (371)
                      .+|||+|+ |.+|...+..+...|.+ .|+.+.+++++.+.+.. +...+ ..+-   .+. +.+.+... ++|.|+++.
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~-~~~~~-~~d~---~~~-~~~~~~~~-~~d~vi~~a   76 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG-EADVF-IGDI---TDA-DSINPAFQ-GIDALVILT   76 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC-CTTEE-ECCT---TSH-HHHHHHHT-TCSEEEECC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccC-CcEEE-Eeee---ccc-cccccccc-cceeeEEEE
Confidence            58999998 99999999999888863 56667778776554332 23322 2222   122 22333333 689999887


Q ss_pred             CC
Q 017457          263 GL  264 (371)
Q Consensus       263 g~  264 (371)
                      +.
T Consensus        77 ~~   78 (252)
T d2q46a1          77 SA   78 (252)
T ss_dssp             CC
T ss_pred             ee
Confidence            53

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.08  E-value=0.047  Score=44.15  Aligned_cols=102  Identities=16%  Similarity=0.049  Sum_probs=64.6

Q ss_pred             HcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHHHHHHhhCC
Q 017457          178 VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTDG  253 (371)
Q Consensus       178 ~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~~~g  253 (371)
                      ...++||++||=+|+|. |..+..+++..+-.+|++++.+++..+.+++    .+-...+..+.   .+.. .. .....
T Consensus        51 ~l~lkpg~~VLDlGcG~-G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~---~~~~-~~-~~~~~  124 (209)
T d1nt2a_          51 RLKLRGDERVLYLGAAS-GTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDA---SKPW-KY-SGIVE  124 (209)
T ss_dssp             CCCCCSSCEEEEETCTT-SHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCT---TCGG-GT-TTTCC
T ss_pred             cCCCCCCCEEEEeCCcC-CHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeec---cCcc-cc-ccccc
Confidence            45799999999999866 6677788887765599999999988776644    33222222211   1110 00 00011


Q ss_pred             CcCEEEECCCCh----HHHHHHHHHhhcCCceEEEEC
Q 017457          254 GADYCFECIGLT----SVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       254 g~d~vid~~g~~----~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      .+|+++......    ..+..+.+.|+++ |.++..-
T Consensus       125 ~vd~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~  160 (209)
T d1nt2a_         125 KVDLIYQDIAQKNQIEILKANAEFFLKEK-GEVVIMV  160 (209)
T ss_dssp             CEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             eEEEEEecccChhhHHHHHHHHHHHhccC-CeEEEEE
Confidence            567777544321    2367788899998 9887653

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.06  E-value=0.0089  Score=40.13  Aligned_cols=35  Identities=17%  Similarity=0.315  Sum_probs=31.4

Q ss_pred             CeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhH
Q 017457          185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK  220 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~  220 (371)
                      ++|.|+|+|.+|.+.++-|+.+|. ++++.+.+++.
T Consensus         2 k~vgIlG~GQLgrMl~~Aa~~LG~-~v~vldp~~~~   36 (78)
T d3etja2           2 KQVCVLGNGQLGRMLRQAGEPLGI-AVWPVGLDAEP   36 (78)
T ss_dssp             EEEEEEBCSHHHHHHHHHHGGGTE-EEEEECTTSCG
T ss_pred             CEEEEEcCCHHHHHHHHHHHHcCC-EEEEEcCCCCC
Confidence            579999999999999999999999 99999976544

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=95.01  E-value=0.069  Score=37.23  Aligned_cols=72  Identities=19%  Similarity=0.215  Sum_probs=51.3

Q ss_pred             CCCCCCeEEEEcCChHHHHH-HHHHHHcCCCeEEEEcCCh-hHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCE
Q 017457          180 GVEVGSTVAIFGLGAVGLAV-AEGARLNRASKIIGVDINP-EKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADY  257 (371)
Q Consensus       180 ~~~~g~~VLI~G~g~~G~~a-i~la~~~g~~~Vi~~~~~~-~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~  257 (371)
                      .+...+++.++|.|++|+.+ +++++..|+ .|.+.|... ...+.+++.|+.....++.   ...         .++|+
T Consensus         4 ~~~~~~~ihfiGigG~GMs~LA~~L~~~G~-~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~---~~i---------~~~d~   70 (96)
T d1p3da1           4 EMRRVQQIHFIGIGGAGMSGIAEILLNEGY-QISGSDIADGVVTQRLAQAGAKIYIGHAE---EHI---------EGASV   70 (96)
T ss_dssp             CCTTCCEEEEETTTSTTHHHHHHHHHHHTC-EEEEEESCCSHHHHHHHHTTCEEEESCCG---GGG---------TTCSE
T ss_pred             cchhCCEEEEEEECHHHHHHHHHHHHhCCC-EEEEEeCCCChhhhHHHHCCCeEEECCcc---ccC---------CCCCE
Confidence            35667899999998889887 788899999 999999754 3455677788864443333   111         16788


Q ss_pred             EEECCCC
Q 017457          258 CFECIGL  264 (371)
Q Consensus       258 vid~~g~  264 (371)
                      |+-+.+-
T Consensus        71 vV~S~AI   77 (96)
T d1p3da1          71 VVVSSAI   77 (96)
T ss_dssp             EEECTTS
T ss_pred             EEECCCc
Confidence            8866553

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=95.00  E-value=0.15  Score=38.56  Aligned_cols=97  Identities=22%  Similarity=0.305  Sum_probs=63.7

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHc--CCCeEEEEcCChh--H-HHHHHHhCcceEEcCCCCCCccH--------------
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLN--RASKIIGVDINPE--K-FEIGKKFGITDFINPATCGDKTV--------------  243 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~--g~~~Vi~~~~~~~--~-~~~~~~lga~~v~~~~~~~~~~~--------------  243 (371)
                      .++|.|+|+ |.+|.-+..+.+..  .+ +|+++..+..  . .+.++++.+..++-.++   ...              
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~---~~~~~l~~~~~~~~~~v   77 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRY-QVIALTANRNVKDLADAAKRTNAKRAVIADP---SLYNDLKEALAGSSVEA   77 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGE-EEEEEEESSCHHHHHHHHHHTTCSEEEESCG---GGHHHHHHHTTTCSSEE
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCc-EEEEEEeCCCHHHHHHHHHhhccccceeccH---HHHHHHHHHhhhccccc
Confidence            478999998 99999999999875  46 6777654433  2 33456677776654333   111              


Q ss_pred             ---HHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEEC
Q 017457          244 ---SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       244 ---~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                         .+.+.+.....+|++++++.+..++...+..++.+  .-+.++
T Consensus        78 ~~g~~~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~g--k~iaLA  121 (150)
T d1r0ka2          78 AAGADALVEAAMMGADWTMAAIIGCAGLKATLAAIRKG--KTVALA  121 (150)
T ss_dssp             EESHHHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTT--SEEEEC
T ss_pred             ccCccchheecccccceeeeecCchhHHHHHHHHHhcC--CEEEEe
Confidence               11122222226899999988888889999999874  445554

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.92  E-value=0.024  Score=49.31  Aligned_cols=98  Identities=21%  Similarity=0.259  Sum_probs=62.3

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc---eEEcCCCCCCccHHHHHHHhh--
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIKEMT--  251 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~---~v~~~~~~~~~~~~~~i~~~~--  251 (371)
                      +++|++||=.++|. |..++.+|+ .|+.+|+.++.+++..+.+++    .|..   +++.      .+..+.+..+.  
T Consensus       143 ~~~g~~VLDl~~g~-G~~si~~a~-~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~------~d~~~~~~~~~~~  214 (324)
T d2as0a2         143 VQPGDRVLDVFTYT-GGFAIHAAI-AGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIV------GSAFEEMEKLQKK  214 (324)
T ss_dssp             CCTTCEEEETTCTT-THHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE------SCHHHHHHHHHHT
T ss_pred             cCCCCeeecccCcc-cchhhhhhh-cCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeee------chhhhhhHHHHhc
Confidence            67899998887633 334444444 477789999999998888755    4542   2222      34444444432  


Q ss_pred             CCCcCEEE-ECCCC--------------hHHHHHHHHHhhcCCceEEEECc
Q 017457          252 DGGADYCF-ECIGL--------------TSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       252 ~gg~d~vi-d~~g~--------------~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      ++.||+|+ |.-..              ...+..+++.++++ |.++.+..
T Consensus       215 ~~~fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pG-G~lv~~s~  264 (324)
T d2as0a2         215 GEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDG-GILVTCSC  264 (324)
T ss_dssp             TCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEE-EEEEEEEC
T ss_pred             cCCCCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCC-cEEEEEeC
Confidence            23899998 43221              11356677889998 99888864

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.91  E-value=0.055  Score=44.42  Aligned_cols=100  Identities=16%  Similarity=0.142  Sum_probs=63.8

Q ss_pred             HHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh----CcceEEcCCCCCCccHHHHHHHhhC
Q 017457          177 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GITDFINPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       177 ~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l----ga~~v~~~~~~~~~~~~~~i~~~~~  252 (371)
                      ....+++|++||=+|+|. |..+..+|+.....+|++++.+++..+.+++.    +....+..+.   ....    ....
T Consensus        68 ~~l~ikpG~~VLDlGcGs-G~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~---~~~~----~~~~  139 (230)
T d1g8sa_          68 KVMPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDA---NKPQ----EYAN  139 (230)
T ss_dssp             CCCCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCT---TCGG----GGTT
T ss_pred             HhCCCCCCCEEEEeCEEc-CHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEee---ccCc----cccc
Confidence            346799999999999876 77777888865444999999999888877653    2112222111   1111    1111


Q ss_pred             C--CcCEEEECCCCh----HHHHHHHHHhhcCCceEEEE
Q 017457          253 G--GADYCFECIGLT----SVMNDAFNSSREGWGKTVIL  285 (371)
Q Consensus       253 g--g~d~vid~~g~~----~~~~~~~~~l~~~~G~~v~~  285 (371)
                      .  .+|+++......    ..+..+.+.|+++ |.++..
T Consensus       140 ~~~~v~~i~~~~~~~~~~~~~l~~~~r~LKpg-G~~~i~  177 (230)
T d1g8sa_         140 IVEKVDVIYEDVAQPNQAEILIKNAKWFLKKG-GYGMIA  177 (230)
T ss_dssp             TCCCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ccceeEEeeccccchHHHHHHHHHHHHhcccC-ceEEEE
Confidence            2  455666544422    2367788899998 987765

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=94.86  E-value=0.042  Score=47.33  Aligned_cols=74  Identities=19%  Similarity=0.267  Sum_probs=45.9

Q ss_pred             eEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC--Ch---hHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCC-CcCEE
Q 017457          186 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDI--NP---EKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYC  258 (371)
Q Consensus       186 ~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~--~~---~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g-g~d~v  258 (371)
                      +|||+|+ |.+|...+..+...|. +|++++.  ..   ++.+.+...+--.++..+-   .+ .+.+.+...+ ++|+|
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~-~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di---~~-~~~l~~~~~~~~~d~V   76 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGI-DLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDI---RN-KNDVTRLITKYMPDSC   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSTTHHHHHHHHHTTCCCEEEECCT---TC-HHHHHHHHHHHCCSEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCCcccchhHHHHhhccCCcEEEEccc---CC-HHHHHHHHHhcCCceE
Confidence            6999998 9999999999988899 8999863  12   2233333333222332221   11 2233444334 78999


Q ss_pred             EECCCC
Q 017457          259 FECIGL  264 (371)
Q Consensus       259 id~~g~  264 (371)
                      +.+.+.
T Consensus        77 ih~aa~   82 (338)
T d1orra_          77 FHLAGQ   82 (338)
T ss_dssp             EECCCC
T ss_pred             Eeeccc
Confidence            998763

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=94.81  E-value=0.045  Score=45.83  Aligned_cols=82  Identities=11%  Similarity=0.154  Sum_probs=51.9

Q ss_pred             CCCCCeEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhHH-HHH-HHhCcce---EEcCCCC-CCccHHHHHHHhh
Q 017457          181 VEVGSTVAIFGL-G--AVGLAVAEGARLNRASKIIGVDINPEKF-EIG-KKFGITD---FINPATC-GDKTVSQVIKEMT  251 (371)
Q Consensus       181 ~~~g~~VLI~G~-g--~~G~~ai~la~~~g~~~Vi~~~~~~~~~-~~~-~~lga~~---v~~~~~~-~~~~~~~~i~~~~  251 (371)
                      +-+|+++||+|+ |  ++|.+.++-+...|+ +|+.+.++.++. +.+ ++++.+.   ..|-... +..+..+.+.+..
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga-~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~   81 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAI   81 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhcc
Confidence            457899999995 4  699998888889999 899999887765 333 3455321   1222210 0112333333333


Q ss_pred             CC--CcCEEEECCC
Q 017457          252 DG--GADYCFECIG  263 (371)
Q Consensus       252 ~g--g~d~vid~~g  263 (371)
                      ..  ..|+++++.+
T Consensus        82 ~~~~~ld~~i~~ag   95 (268)
T d2h7ma1          82 GAGNKLDGVVHSIG   95 (268)
T ss_dssp             CTTCCEEEEEECCC
T ss_pred             ccCCCcceeeeccc
Confidence            32  6899998887

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.75  E-value=0.18  Score=43.65  Aligned_cols=104  Identities=14%  Similarity=0.133  Sum_probs=67.9

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh-----------Cc----ceEEcCCCCC
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-----------GI----TDFINPATCG  239 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l-----------ga----~~v~~~~~~~  239 (371)
                      +....+++++++||=+|+|. |..+.++|+..++.++++++.+++..+.+++.           |.    -.++..+- .
T Consensus       143 ~~~~~~l~~~~~vlD~GcG~-G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~-~  220 (328)
T d1nw3a_         143 MIDEIKMTDDDLFVDLGSGV-GQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDF-L  220 (328)
T ss_dssp             HHHHSCCCTTCEEEEETCTT-SHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCT-T
T ss_pred             HHHHcCCCCCCEEEEcCCCC-CHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECcc-c
Confidence            45677899999999999876 88888999999987899999999876665431           21    12332221 1


Q ss_pred             CccHHHHHHHhhCCCcCEEEE-CCC-Ch---HHHHHHHHHhhcCCceEEEEC
Q 017457          240 DKTVSQVIKEMTDGGADYCFE-CIG-LT---SVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       240 ~~~~~~~i~~~~~gg~d~vid-~~g-~~---~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      +..+.+.+.     .+|+|+- ... .+   ..+..+++.|+++ |+++..-
T Consensus       221 ~~~~~~~~~-----~advi~~~~~~f~~~~~~~l~e~~r~LKpG-g~iv~~~  266 (328)
T d1nw3a_         221 SEEWRERIA-----NTSVIFVNNFAFGPEVDHQLKERFANMKEG-GRIVSSK  266 (328)
T ss_dssp             SHHHHHHHH-----HCSEEEECCTTTCHHHHHHHHHHHTTCCTT-CEEEESS
T ss_pred             ccccccccC-----cceEEEEcceecchHHHHHHHHHHHhCCCC-cEEEEec
Confidence            122322221     3678873 221 22   2356778889998 9998764

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=94.63  E-value=0.016  Score=42.60  Aligned_cols=38  Identities=32%  Similarity=0.477  Sum_probs=33.5

Q ss_pred             CCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          180 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       180 ~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      .+.++++++|+|+|.+|.=.+..++.+|. +|+.+.+++
T Consensus        26 ~~~~~~~vvIIGgG~iG~E~A~~l~~~g~-~Vtli~~~~   63 (121)
T d1d7ya2          26 GLRPQSRLLIVGGGVIGLELAATARTAGV-HVSLVETQP   63 (121)
T ss_dssp             HCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             hhhcCCeEEEECcchhHHHHHHHhhcccc-eEEEEeecc
Confidence            36778999999999999999999999999 999998765

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.59  E-value=0.015  Score=46.17  Aligned_cols=37  Identities=16%  Similarity=0.133  Sum_probs=31.7

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE  219 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~  219 (371)
                      .+++|+|+|+|+.|+.++..+...|++.|+++++++.
T Consensus         3 ~~~kVaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           3 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCCEEEEECChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            3689999999999999999999999955888886553

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=94.54  E-value=0.077  Score=42.15  Aligned_cols=90  Identities=16%  Similarity=0.140  Sum_probs=59.7

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  262 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~  262 (371)
                      .|+++.|+|.|.+|...+++++..|. +|++.++...........+...   .     .++.+.+.     ..|+|..+.
T Consensus        46 ~g~tvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~~~~~---~-----~~l~~ll~-----~sD~v~l~~  111 (191)
T d1gdha1          46 DNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASSSDEASYQATF---H-----DSLDSLLS-----VSQFFSLNA  111 (191)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCHHHHHHHTCEE---C-----SSHHHHHH-----HCSEEEECC
T ss_pred             cccceEEeecccchHHHHHHHHhhcc-ccccccccccccchhhcccccc---c-----CCHHHHHh-----hCCeEEecC
Confidence            47999999999999999999999999 9999987654333332222211   1     23433333     368887655


Q ss_pred             CC-hH----HHHHHHHHhhcCCceEEEECc
Q 017457          263 GL-TS----VMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       263 g~-~~----~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      +- +.    .-...++.|+++ ..+|..+.
T Consensus       112 plt~~T~~li~~~~l~~mk~~-a~lIN~sR  140 (191)
T d1gdha1         112 PSTPETRYFFNKATIKSLPQG-AIVVNTAR  140 (191)
T ss_dssp             CCCTTTTTCBSHHHHTTSCTT-EEEEECSC
T ss_pred             CCCchHhheecHHHhhCcCCc-cEEEecCC
Confidence            42 11    124677788886 77777763

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.52  E-value=0.086  Score=44.70  Aligned_cols=102  Identities=17%  Similarity=0.243  Sum_probs=57.2

Q ss_pred             CeEEEEcC-ChHHHHHHHHHHHcCCC--eEEEEcCChhHHHH----HHHh---Ccc-eEE--cCCCCCCccHHHHHHHhh
Q 017457          185 STVAIFGL-GAVGLAVAEGARLNRAS--KIIGVDINPEKFEI----GKKF---GIT-DFI--NPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la~~~g~~--~Vi~~~~~~~~~~~----~~~l---ga~-~v~--~~~~~~~~~~~~~i~~~~  251 (371)
                      +.|||+|+ +++|.+.+..+...|++  .|+.+.++.++.+.    ++++   +.. ..+  |-.+  ..+..+.+.+..
T Consensus         3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~   80 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRD--SKSVAAARERVT   80 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTC--HHHHHHHHHTCT
T ss_pred             CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccc--hHhhhhhhhhcc
Confidence            34577897 99999998888888883  23334444443332    2232   222 222  3222  123333333333


Q ss_pred             CCCcCEEEECCCChH-------------------------HHHHHHHHhhc-CCceEEEECcc
Q 017457          252 DGGADYCFECIGLTS-------------------------VMNDAFNSSRE-GWGKTVILGVE  288 (371)
Q Consensus       252 ~gg~d~vid~~g~~~-------------------------~~~~~~~~l~~-~~G~~v~~g~~  288 (371)
                      .+..|+++++.|...                         ..+.++..|.. ++|++|.+++.
T Consensus        81 ~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~  143 (285)
T d1jtva_          81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSV  143 (285)
T ss_dssp             TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEG
T ss_pred             ccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEech
Confidence            458999999887411                         24455566643 23899988764

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.52  E-value=0.0093  Score=51.72  Aligned_cols=42  Identities=24%  Similarity=0.264  Sum_probs=31.4

Q ss_pred             HHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhH
Q 017457          177 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK  220 (371)
Q Consensus       177 ~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~  220 (371)
                      +...+.+|++||-+|+| .|.+++.+|+ .|+++|++++.++.-
T Consensus        29 ~~~~~~~~~~VLDiGcG-~G~lsl~aa~-~Ga~~V~aid~s~~~   70 (311)
T d2fyta1          29 QNPHIFKDKVVLDVGCG-TGILSMFAAK-AGAKKVLGVDQSEIL   70 (311)
T ss_dssp             HCGGGTTTCEEEEETCT-TSHHHHHHHH-TTCSEEEEEESSTHH
T ss_pred             hccccCCcCEEEEECCC-CCHHHHHHHH-cCCCEEEEEeCHHHH
Confidence            33456789999999987 3666666665 587799999988754

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=94.48  E-value=0.35  Score=37.54  Aligned_cols=136  Identities=12%  Similarity=0.044  Sum_probs=77.5

Q ss_pred             eEEEEcCChHHHH-HHHHHHHcCCC-eEE-EEcCChhHHHH-HHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          186 TVAIFGLGAVGLA-VAEGARLNRAS-KII-GVDINPEKFEI-GKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       186 ~VLI~G~g~~G~~-ai~la~~~g~~-~Vi-~~~~~~~~~~~-~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      +|.|+|.|.+|.- .+...+..+-. +++ +.++++++.+. .++++...+++       ++.+.+.   ...+|+|+-+
T Consensus         5 rigiIG~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~-------~~~ell~---~~~id~v~I~   74 (181)
T d1zh8a1           5 RLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFD-------SYEELLE---SGLVDAVDLT   74 (181)
T ss_dssp             EEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEES-------CHHHHHH---SSCCSEEEEC
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceee-------eeecccc---ccccceeecc
Confidence            5889999999864 45555554321 455 45677776665 45577666552       3443332   2379999999


Q ss_pred             CCChHHHHHHHHHhhcCCceEEEECccCCCCcee-cCHHHHhc--CceEEEeeccCCC-chhhHHHHHHHHHcCCC
Q 017457          262 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS-LNSIEILK--GRSVCGTYFGGLK-PRSDIATLAQKYLDKEL  333 (371)
Q Consensus       262 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~-~~~~~~~~--~~~~~g~~~~~~~-~~~~~~~~~~~~~~g~~  333 (371)
                      ++.....+.+..++..  |.=+++.-+....... .....+..  +..+.-.....+. ....+.++.+++++|++
T Consensus        75 tp~~~h~~~~~~al~~--gk~V~~EKPl~~~~~e~~~l~~~~~~~~~~~~v~~~~R~~~~~~~~~~~~~~i~~G~i  148 (181)
T d1zh8a1          75 LPVELNLPFIEKALRK--GVHVICEKPISTDVETGKKVVELSEKSEKTVYIAENFRENSYQKEFEDFYQVVAEGKP  148 (181)
T ss_dssp             CCGGGHHHHHHHHHHT--TCEEEEESSSSSSHHHHHHHHHHHHHCSSCEEEECGGGCCHHHHHHHHHHHHHHSCCC
T ss_pred             cccccccccccccccc--chhhhcCCCCcCCHHHHHHHHHHHHHhCCeEEEEeeccccccCHHHHHHHHHHHCCCC
Confidence            8887768888888876  5556664322111111 00111222  3333221111111 23567888999999976

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=94.42  E-value=0.025  Score=44.66  Aligned_cols=38  Identities=24%  Similarity=0.281  Sum_probs=33.8

Q ss_pred             CCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          180 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       180 ~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      ....+++|+|+|+|+.|+.|+..+...|. +|++.+..+
T Consensus        39 ~~~~~k~V~IIGaGPAGL~AA~~la~~G~-~Vtl~E~~~   76 (179)
T d1ps9a3          39 PAVQKKNLAVVGAGPAGLAFAINAAARGH-QVTLFDAHS   76 (179)
T ss_dssp             SCSSCCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSS
T ss_pred             CCCCCcEEEEECccHHHHHHHHHHHhhcc-ceEEEeccC
Confidence            35667899999999999999999999999 999998754

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.35  E-value=0.073  Score=40.37  Aligned_cols=34  Identities=21%  Similarity=0.146  Sum_probs=30.5

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcC
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI  216 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~  216 (371)
                      -.|++|||+|+|.+|..-+..+...|+ +|+++++
T Consensus        11 l~gkrvLViGgG~va~~ka~~Ll~~GA-~VtVvap   44 (150)
T d1kyqa1          11 LKDKRILLIGGGEVGLTRLYKLMPTGC-KLTLVSP   44 (150)
T ss_dssp             CTTCEEEEEEESHHHHHHHHHHGGGTC-EEEEEEE
T ss_pred             eCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence            468999999999999999999999999 8888864

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=94.33  E-value=0.21  Score=34.05  Aligned_cols=67  Identities=19%  Similarity=0.336  Sum_probs=47.7

Q ss_pred             CeEEEEcCChHHHHH-HHHHHHcCCCeEEEEcCCh-hHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457          185 STVAIFGLGAVGLAV-AEGARLNRASKIIGVDINP-EKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  262 (371)
Q Consensus       185 ~~VLI~G~g~~G~~a-i~la~~~g~~~Vi~~~~~~-~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~  262 (371)
                      .+|-++|.|++|+.+ +++++..|+ .|.+.|..+ +..+.++++|+......+.   +++         .++|+|+-+.
T Consensus         2 ~~ihfiGIgG~GMs~LA~~L~~~G~-~VsGSD~~~~~~t~~L~~~Gi~i~~gh~~---~~i---------~~~d~vV~Ss   68 (89)
T d1j6ua1           2 MKIHFVGIGGIGMSAVALHEFSNGN-DVYGSNIEETERTAYLRKLGIPIFVPHSA---DNW---------YDPDLVIKTP   68 (89)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTCCEESSCCT---TSC---------CCCSEEEECT
T ss_pred             cEEEEEeECHHHHHHHHHHHHhCCC-eEEEEeCCCChhHHHHHHCCCeEEeeecc---ccc---------CCCCEEEEec
Confidence            357778999999865 578889999 999999876 4566788899864443332   222         2689888665


Q ss_pred             CC
Q 017457          263 GL  264 (371)
Q Consensus       263 g~  264 (371)
                      +-
T Consensus        69 AI   70 (89)
T d1j6ua1          69 AV   70 (89)
T ss_dssp             TC
T ss_pred             Cc
Confidence            53

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=94.31  E-value=0.25  Score=37.66  Aligned_cols=94  Identities=15%  Similarity=0.270  Sum_probs=55.9

Q ss_pred             CeEEEEcCChHHH-HHHHHHHHcCCCeEEEE-cCChh--HHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCC-CcCEEE
Q 017457          185 STVAIFGLGAVGL-AVAEGARLNRASKIIGV-DINPE--KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCF  259 (371)
Q Consensus       185 ~~VLI~G~g~~G~-~ai~la~~~g~~~Vi~~-~~~~~--~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g-g~d~vi  259 (371)
                      =+|.|+|+|.+|. +.+++.+....-.++++ +++.+  ...+++++|.....        ...+.+.+...- ++|+||
T Consensus         5 irvaIIGaG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~--------~~~d~l~~~~~~~~iDiVf   76 (157)
T d1nvmb1           5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY--------AGVEGLIKLPEFADIDFVF   76 (157)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES--------SHHHHHHHSGGGGGEEEEE
T ss_pred             cEEEEEcCcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCcccc--------cceeeeeecccccccCEEE
Confidence            3789999999987 46677775533256555 44443  45677778865332        223333333222 799999


Q ss_pred             ECCCChHHHHHH--HHHhhcCCceEEEECc
Q 017457          260 ECIGLTSVMNDA--FNSSREGWGKTVILGV  287 (371)
Q Consensus       260 d~~g~~~~~~~~--~~~l~~~~G~~v~~g~  287 (371)
                      ++++.....+..  .+.++.+ -.+++...
T Consensus        77 ~ATpag~h~~~~~~~~aa~~G-~~VID~s~  105 (157)
T d1nvmb1          77 DATSASAHVQNEALLRQAKPG-IRLIDLTP  105 (157)
T ss_dssp             ECSCHHHHHHHHHHHHHHCTT-CEEEECST
T ss_pred             EcCCchhHHHhHHHHHHHHcC-CEEEEccc
Confidence            998865435433  4445554 45666553

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.23  E-value=0.056  Score=42.36  Aligned_cols=49  Identities=24%  Similarity=0.194  Sum_probs=37.0

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK  225 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~  225 (371)
                      +.+...--++++|||+|+|+++.+++..+.  +.++|+++.|+.++.+.+.
T Consensus         9 l~~~~~~~~~k~vlIlGaGG~arai~~aL~--~~~~i~I~nR~~~ka~~l~   57 (177)
T d1nvta1           9 LEEEIGRVKDKNIVIYGAGGAARAVAFELA--KDNNIIIANRTVEKAEALA   57 (177)
T ss_dssp             HHHHHCCCCSCEEEEECCSHHHHHHHHHHT--SSSEEEEECSSHHHHHHHH
T ss_pred             HHHhCCCcCCCEEEEECCcHHHHHHHHHHc--cccceeeehhhhhHHHHHH
Confidence            444444467899999999999998776554  3448999999988877653

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=94.20  E-value=0.045  Score=47.71  Aligned_cols=77  Identities=14%  Similarity=0.086  Sum_probs=49.6

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHH-HHHh----CcceEEcCCCCCCccHHHHHHHhhCC-C
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEI-GKKF----GITDFINPATCGDKTVSQVIKEMTDG-G  254 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~-~~~l----ga~~v~~~~~~~~~~~~~~i~~~~~g-g  254 (371)
                      -++++|||+|+ |-+|...++.+...|. .|+++++++.+... .+..    +...+. .+-   .+. +.+.+.... .
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~i~~~~-~Dl---~d~-~~l~~~~~~~~   79 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAPTVPSLFETARVADGMQSEI-GDI---RDQ-NKLLESIREFQ   79 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCSSSSCHHHHTTTTTTSEEEE-CCT---TCH-HHHHHHHHHHC
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCCccHHHHhhhhcccCCeEEE-eec---cCh-Hhhhhhhhhch
Confidence            36799999998 9999999999999999 89999986653222 1111    222222 111   122 223333333 7


Q ss_pred             cCEEEECCCC
Q 017457          255 ADYCFECIGL  264 (371)
Q Consensus       255 ~d~vid~~g~  264 (371)
                      +|+++.+++.
T Consensus        80 ~~~v~~~aa~   89 (356)
T d1rkxa_          80 PEIVFHMAAQ   89 (356)
T ss_dssp             CSEEEECCSC
T ss_pred             hhhhhhhhcc
Confidence            8999988774

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.18  E-value=0.06  Score=43.84  Aligned_cols=107  Identities=15%  Similarity=0.173  Sum_probs=69.3

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHHHHH
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLN--RASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIK  248 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~--g~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~  248 (371)
                      +....+..+.++||=+|.+. |..++.+|+++  +. +|+.++.+++..+.+++    .|....+....   .+..+.+.
T Consensus        51 L~~L~~~~~~k~vLEiGt~~-GyStl~~a~al~~~g-~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~---Gda~e~l~  125 (219)
T d2avda1          51 LANLARLIQAKKALDLGTFT-GYSALALALALPADG-RVVTCEVDAQPPELGRPLWRQAEAEHKIDLRL---KPALETLD  125 (219)
T ss_dssp             HHHHHHHTTCCEEEEECCTT-SHHHHHHHTTSCTTC-EEEEEESCSHHHHHHHHHHHHTTCTTTEEEEE---SCHHHHHH
T ss_pred             HHHHHHccCCCeEEEEechh-hHHHHHHHHhCCCCc-eEEEEeechhHHHHHHHHHHhcCccceEEEEE---eehhhcch
Confidence            33455677789999999754 77788888876  44 99999999987666654    45432222222   34444444


Q ss_pred             Hhh----CCCcCEEE-ECCCCh--HHHHHHHHHhhcCCceEEEECc
Q 017457          249 EMT----DGGADYCF-ECIGLT--SVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       249 ~~~----~gg~d~vi-d~~g~~--~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      ++.    .+.||.|| |.--..  ..++.+++.|+++ |.++.=..
T Consensus       126 ~~~~~~~~~~fD~ifiD~dk~~y~~~~~~~~~lL~~G-Gvii~Dn~  170 (219)
T d2avda1         126 ELLAAGEAGTFDVAVVDADKENCSAYYERCLQLLRPG-GILAVLRV  170 (219)
T ss_dssp             HHHHTTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             hhhhhcccCCccEEEEeCCHHHHHHHHHHHHHHhcCC-cEEEEeCC
Confidence            432    23799998 543332  3478899999997 87766443

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=94.16  E-value=0.064  Score=44.93  Aligned_cols=94  Identities=15%  Similarity=0.141  Sum_probs=61.0

Q ss_pred             CCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc---eEEcCCCCCCccHHHHHHHhhC
Q 017457          180 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       180 ~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~---~v~~~~~~~~~~~~~~i~~~~~  252 (371)
                      .+++|++||-.|+|. |..++.+|+.-++ +|++++.+++..+.+++    .|.+   .+++.+.   .+       +..
T Consensus       104 ~~~~g~~VlD~~aG~-G~~~l~~a~~~~~-~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~---~~-------~~~  171 (260)
T d2frna1         104 VAKPDELVVDMFAGI-GHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDN---RD-------FPG  171 (260)
T ss_dssp             HCCTTCEEEETTCTT-TTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCT---TT-------CCC
T ss_pred             hcCCccEEEECcceE-cHHHHHHHHhCCc-EEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcch---HH-------hcc
Confidence            368999999987643 4555566665445 99999999998888764    3432   3343332   22       222


Q ss_pred             C-CcCEEE-ECC-CChHHHHHHHHHhhcCCceEEEEC
Q 017457          253 G-GADYCF-ECI-GLTSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       253 g-g~d~vi-d~~-g~~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      . .+|.|+ +.. .+...+..+++.++++ |.+....
T Consensus       172 ~~~~D~Ii~~~p~~~~~~l~~a~~~l~~g-G~lh~~~  207 (260)
T d2frna1         172 ENIADRILMGYVVRTHEFIPKALSIAKDG-AIIHYHN  207 (260)
T ss_dssp             CSCEEEEEECCCSSGGGGHHHHHHHEEEE-EEEEEEE
T ss_pred             CCCCCEEEECCCCchHHHHHHHHhhcCCC-CEEEEEe
Confidence            3 688665 433 3344478899999997 8776543

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=94.08  E-value=0.12  Score=42.84  Aligned_cols=34  Identities=15%  Similarity=0.124  Sum_probs=29.7

Q ss_pred             eEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH
Q 017457          186 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK  220 (371)
Q Consensus       186 ~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~  220 (371)
                      +.||+|+ +++|.+.+..+...|+ +|++++++.++
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~-~Vvi~~r~~~~   37 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEG   37 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchH
Confidence            5688998 8999999999999999 99999987654

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=94.07  E-value=0.079  Score=42.15  Aligned_cols=90  Identities=23%  Similarity=0.256  Sum_probs=59.0

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      -.|++|.|+|.|.+|...+++++..|+ +|++.++..... .....+...+        .++.+.+.     ..|+|.-+
T Consensus        47 L~gktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~-~~~~~~~~~~--------~~l~~ll~-----~sD~i~~~  111 (193)
T d1mx3a1          47 IRGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPYLSDG-VERALGLQRV--------STLQDLLF-----HSDCVTLH  111 (193)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCTT-HHHHHTCEEC--------SSHHHHHH-----HCSEEEEC
T ss_pred             eeCceEEEeccccccccceeeeecccc-ceeeccCccccc-chhhhccccc--------cchhhccc-----cCCEEEEe
Confidence            468899999999999999999999999 999998754332 2222343221        23433333     36788765


Q ss_pred             CCCh-H----HHHHHHHHhhcCCceEEEECc
Q 017457          262 IGLT-S----VMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       262 ~g~~-~----~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      .+.. .    .-...+..|+++ ..+|..+.
T Consensus       112 ~plt~~T~~li~~~~l~~mk~~-a~lIN~sR  141 (193)
T d1mx3a1         112 CGLNEHNHHLINDFTVKQMRQG-AFLVNTAR  141 (193)
T ss_dssp             CCCCTTCTTSBSHHHHTTSCTT-EEEEECSC
T ss_pred             ecccccchhhhhHHHHhccCCC-CeEEecCC
Confidence            5421 1    124567778886 77777664

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=94.01  E-value=0.068  Score=38.79  Aligned_cols=43  Identities=14%  Similarity=0.023  Sum_probs=36.2

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      +.+.....++++|+|+|+|.+|+=.+..+..+|. +|.++.+.+
T Consensus        13 ~~~~l~~~~~~~vvVvGgG~ig~E~A~~l~~~g~-~vt~i~~~~   55 (121)
T d1mo9a2          13 LVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGR-RTVMLVRTE   55 (121)
T ss_dssp             HHHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred             HHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcch-hheEeeccc
Confidence            3445567788999999999999999999999999 899988654

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=93.91  E-value=0.024  Score=43.71  Aligned_cols=87  Identities=11%  Similarity=0.140  Sum_probs=55.0

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcc-----eEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-----DFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~-----~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      +|+|+|+|.+|.+.+..+...|. .|..+++++++.+.....+.+     ..+..      +..+.+     +.+|++|-
T Consensus         2 kI~IiGaG~iG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~-----~~~D~iii   69 (167)
T d1ks9a2           2 KITVLGCGALGQLWLTALCKQGH-EVQGWLRVPQPYCSVNLVETDGSIFNESLTA------NDPDFL-----ATSDLLLV   69 (167)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSEEEEEEECTTSCEEEEEEEE------SCHHHH-----HTCSEEEE
T ss_pred             EEEEECcCHHHHHHHHHHHHCCC-ceEEEEcCHHHhhhhccccCCcccccccccc------chhhhh-----cccceEEE
Confidence            68999999999998888888899 999999887654433222211     11111      111222     16899999


Q ss_pred             CCCChHHHHHHHHHhh----cCCceEEEEC
Q 017457          261 CIGLTSVMNDAFNSSR----EGWGKTVILG  286 (371)
Q Consensus       261 ~~g~~~~~~~~~~~l~----~~~G~~v~~g  286 (371)
                      ++.... ...+++.+.    ++ ..++.+.
T Consensus        70 ~vka~~-~~~~~~~l~~~~~~~-~~Iv~~q   97 (167)
T d1ks9a2          70 TLKAWQ-VSDAVKSLASTLPVT-TPILLIH   97 (167)
T ss_dssp             CSCGGG-HHHHHHHHHTTSCTT-SCEEEEC
T ss_pred             eecccc-hHHHHHhhccccCcc-cEEeecc
Confidence            998766 455554443    33 4566553

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=93.90  E-value=0.31  Score=36.76  Aligned_cols=97  Identities=18%  Similarity=0.250  Sum_probs=63.8

Q ss_pred             CeEEEEcC-ChHHHHHHHHHHHc--CCCeEEEEcCCh--hHH-HHHHHhCcceEEcCCCCCCccH---H-----------
Q 017457          185 STVAIFGL-GAVGLAVAEGARLN--RASKIIGVDINP--EKF-EIGKKFGITDFINPATCGDKTV---S-----------  244 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la~~~--g~~~Vi~~~~~~--~~~-~~~~~lga~~v~~~~~~~~~~~---~-----------  244 (371)
                      ++|.|+|+ |.+|.-++.+.+..  .. +|++...+.  +.+ +.+.++.+..++-.++   ...   .           
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~---~~~~~l~~~l~~~~~~~~   77 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHF-RVVALVAGKNVTRMVEQCLEFSPRYAVMDDE---ASAKLLKTMLQQQGSRTE   77 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTE-EEEEEEESSCHHHHHHHHHHHCCSEEEESSH---HHHHHHHHHHHHTTCCCE
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCc-EEEEEEecCcHHHHHHHHHHHhhcccccccH---HHHHHHHHHhhhhccccc
Confidence            36899998 99999999999876  35 666665333  332 3345677776654433   111   1           


Q ss_pred             -----HHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECc
Q 017457          245 -----QVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       245 -----~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                           +.+.++..- .+|+|+.+..+...+...+..++.+  .-+.+..
T Consensus        78 ~~~g~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~g--k~iaLAN  124 (151)
T d1q0qa2          78 VLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAG--KTILLAN  124 (151)
T ss_dssp             EEESHHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTT--CEEEECC
T ss_pred             cccChHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcC--CeEEEEc
Confidence                 122233333 7899999988888899999999874  5555543

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=93.84  E-value=0.028  Score=47.48  Aligned_cols=34  Identities=24%  Similarity=0.371  Sum_probs=30.6

Q ss_pred             CCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          184 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       184 g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      +++|+|+|+|.-|++++..++..|. +|++++.++
T Consensus         1 ~KkV~IIGaG~aGL~aA~~La~~G~-~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGAGVSGLAAAYKLKIHGL-NVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTSC-EEEEECSSS
T ss_pred             CCEEEEECcCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence            5889999999999999999999999 999998643

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=93.80  E-value=0.14  Score=43.97  Aligned_cols=95  Identities=19%  Similarity=0.195  Sum_probs=62.9

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhC------c-----ceEEcCCCCCCccHHHHHHHh
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG------I-----TDFINPATCGDKTVSQVIKEM  250 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lg------a-----~~v~~~~~~~~~~~~~~i~~~  250 (371)
                      ...++|||+|+|. |..+-.+++.....+|.+++.+++=.+.+++.-      +     -+++.      .+..+.+++ 
T Consensus        76 ~~pk~VLiiG~G~-G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~------~Da~~~l~~-  147 (312)
T d1uira_          76 PEPKRVLIVGGGE-GATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVI------DDARAYLER-  147 (312)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEE------SCHHHHHHH-
T ss_pred             CCcceEEEeCCCc-hHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEE------chHHHHhhh-
Confidence            4568999998865 555666777665559999999998777776531      1     12222      345555554 


Q ss_pred             hCCCcCEEE-ECC---CC---------hHHHHHHHHHhhcCCceEEEE
Q 017457          251 TDGGADYCF-ECI---GL---------TSVMNDAFNSSREGWGKTVIL  285 (371)
Q Consensus       251 ~~gg~d~vi-d~~---g~---------~~~~~~~~~~l~~~~G~~v~~  285 (371)
                      +++.+|+|| |..   +.         ...++.+.++|+++ |.++.-
T Consensus       148 ~~~~yDvIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~-Gvlv~~  194 (312)
T d1uira_         148 TEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPG-GVMGMQ  194 (312)
T ss_dssp             CCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEE-EEEEEE
T ss_pred             cCCcccEEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCC-ceEEEe
Confidence            344899997 552   21         12367888999998 987754

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=93.74  E-value=0.037  Score=45.90  Aligned_cols=35  Identities=20%  Similarity=0.179  Sum_probs=31.0

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      ..++|+|+|+|+.|++++..+...|. +|+++++++
T Consensus         3 ~~~kV~IiGaG~aGl~~A~~L~~~G~-~v~v~Er~~   37 (265)
T d2voua1           3 TTDRIAVVGGSISGLTAALMLRDAGV-DVDVYERSP   37 (265)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCCcEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            45789999999999999999988999 999998653

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=93.69  E-value=0.1  Score=45.61  Aligned_cols=76  Identities=12%  Similarity=0.074  Sum_probs=44.0

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-----hHHHHHHHhC----cc-eEEcCCCCCCccHHHHHHHhhC
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP-----EKFEIGKKFG----IT-DFINPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~-----~~~~~~~~lg----a~-~v~~~~~~~~~~~~~~i~~~~~  252 (371)
                      .+.|||+|+ |-+|...+..+...|. .|+++++..     ++.+.+....    .. .++..+-   .+ .+.+.+...
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl---~d-~~~~~~~~~   75 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLEKGY-EVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDL---SD-TSNLTRILR   75 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC---------------------CCEEECCCCS---SC-HHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcC-EEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeec---CC-HHHHHHHHh
Confidence            367899998 9999999999988999 999999743     2333222111    11 1221111   22 233444444


Q ss_pred             C-CcCEEEECCCC
Q 017457          253 G-GADYCFECIGL  264 (371)
Q Consensus       253 g-g~d~vid~~g~  264 (371)
                      + .+|+|+++.+-
T Consensus        76 ~~~~d~v~h~aa~   88 (357)
T d1db3a_          76 EVQPDEVYNLGAM   88 (357)
T ss_dssp             HHCCSEEEECCCC
T ss_pred             ccCCCEEEEeecc
Confidence            4 78999998763

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=93.68  E-value=0.11  Score=42.46  Aligned_cols=48  Identities=25%  Similarity=0.315  Sum_probs=41.6

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcc
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT  230 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~  230 (371)
                      -.|++|+|.|.|.+|..+++++..+|+ ++++++.+..+.+.+.. .|+.
T Consensus        37 l~g~~v~IqG~GnVG~~~a~~L~~~Ga-kvv~~d~~~~~~~~~~~~~g~~   85 (230)
T d1leha1          37 LEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGAD   85 (230)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCCE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEeecccHHHHHHHHHhcCCc
Confidence            568999999999999999999999999 99999999888776654 5554

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.68  E-value=0.057  Score=47.93  Aligned_cols=31  Identities=32%  Similarity=0.332  Sum_probs=28.0

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVD  215 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~  215 (371)
                      |++|||+|+ |-+|...+..+...|. .|++++
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~-~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNY-EVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEe
Confidence            689999998 9999999999999999 999986

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=93.59  E-value=0.24  Score=38.44  Aligned_cols=44  Identities=11%  Similarity=0.074  Sum_probs=37.6

Q ss_pred             CeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCc
Q 017457          185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI  229 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga  229 (371)
                      .+|-++|.|.+|...+.-+...|+ +|++.++++++.+.+.+.++
T Consensus         3 ~nIg~IGlG~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~   46 (176)
T d2pgda2           3 ADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTVSKVDDFLANEA   46 (176)
T ss_dssp             BSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSTHHHHHHHHTTT
T ss_pred             CcEEEEeEhHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHhcc
Confidence            468899999999988777777899 89999999999988876553

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=93.58  E-value=0.12  Score=42.66  Aligned_cols=34  Identities=26%  Similarity=0.335  Sum_probs=30.8

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI  216 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~  216 (371)
                      ...+|+|+|+|++|..++..+..+|.++++.+|.
T Consensus        29 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~   62 (247)
T d1jw9b_          29 KDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDF   62 (247)
T ss_dssp             HHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECC
T ss_pred             hCCCEEEECCCHHHHHHHHHHHHcCCCeEEEECC
Confidence            3578999999999999999999999999999884

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.56  E-value=0.17  Score=39.71  Aligned_cols=89  Identities=20%  Similarity=0.286  Sum_probs=60.7

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      -.|+++.|+|.|.+|...+++++..|. +|++.++.....+ ....+.. .        .++.+.+.     ..|+|.-+
T Consensus        42 l~~k~vgiiG~G~IG~~va~~~~~fg~-~v~~~d~~~~~~~-~~~~~~~-~--------~~l~ell~-----~sDiv~~~  105 (184)
T d1ygya1          42 IFGKTVGVVGLGRIGQLVAQRIAAFGA-YVVAYDPYVSPAR-AAQLGIE-L--------LSLDDLLA-----RADFISVH  105 (184)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCHHH-HHHHTCE-E--------CCHHHHHH-----HCSEEEEC
T ss_pred             ccceeeeeccccchhHHHHHHhhhccc-eEEeecCCCChhH-HhhcCce-e--------ccHHHHHh-----hCCEEEEc
Confidence            457899999999999999999999999 9999987654433 2333432 1        13333333     37888866


Q ss_pred             CCC-hH----HHHHHHHHhhcCCceEEEECc
Q 017457          262 IGL-TS----VMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       262 ~g~-~~----~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      .+. +.    .-...++.|+++ ..+|..+.
T Consensus       106 ~Plt~~T~~lin~~~l~~mk~~-a~lIN~sR  135 (184)
T d1ygya1         106 LPKTPETAGLIDKEALAKTKPG-VIIVNAAR  135 (184)
T ss_dssp             CCCSTTTTTCBCHHHHTTSCTT-EEEEECSC
T ss_pred             CCCCchhhhhhhHHHHhhhCCC-ceEEEecc
Confidence            552 21    124677788886 78877764

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=93.56  E-value=0.11  Score=43.81  Aligned_cols=97  Identities=20%  Similarity=0.136  Sum_probs=65.1

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhC-----c--c---eEEcCCCCCCccHHHHHHHh
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG-----I--T---DFINPATCGDKTVSQVIKEM  250 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lg-----a--~---~v~~~~~~~~~~~~~~i~~~  250 (371)
                      ..+.++|||+|+|. |..+..+++..+..+|.+++.+++=.+.++++-     +  +   .++.      .+..+.+++ 
T Consensus        73 ~~~p~~vLiiGgG~-G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~------~D~~~~l~~-  144 (274)
T d1iy9a_          73 HPNPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQV------DDGFMHIAK-  144 (274)
T ss_dssp             SSSCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEE------SCSHHHHHT-
T ss_pred             cCCcceEEecCCCC-cHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEe------chHHHHHhh-
Confidence            35668999998866 556667777777669999999998777776632     1  1   2332      233334443 


Q ss_pred             hCCCcCEEE-ECCC---------ChHHHHHHHHHhhcCCceEEEEC
Q 017457          251 TDGGADYCF-ECIG---------LTSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       251 ~~gg~d~vi-d~~g---------~~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      +...+|+++ |...         +...++.+.++|+++ |.++.-.
T Consensus       145 ~~~~yDvIi~D~~~p~~~~~~L~t~eFy~~~~~~L~~~-Gv~v~q~  189 (274)
T d1iy9a_         145 SENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKED-GIFVAQT  189 (274)
T ss_dssp             CCSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEE-EEEEEEC
T ss_pred             cCCCCCEEEEcCCCCCCcchhhccHHHHHHHHhhcCCC-ceEEEec
Confidence            334899997 5433         233478899999998 9887654

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.52  E-value=0.012  Score=51.21  Aligned_cols=94  Identities=19%  Similarity=0.187  Sum_probs=54.4

Q ss_pred             cCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHH---HHHHhCc-c--eEEcCCCCCCccHHHHHHHhhC
Q 017457          179 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFE---IGKKFGI-T--DFINPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       179 ~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~---~~~~lga-~--~v~~~~~~~~~~~~~~i~~~~~  252 (371)
                      ..+.+|++||-+|+|. |.+++.+|+ .|+++|++++.++....   .++..+. +  .++..+.   .++     ....
T Consensus        29 ~~~~~~~~VLDiGcG~-G~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~~---~~~-----~~~~   98 (316)
T d1oria_          29 RHLFKDKVVLDVGSGT-GILCMFAAK-AGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKV---EEV-----ELPV   98 (316)
T ss_dssp             HHHHTTCEEEEETCTT-SHHHHHHHH-TTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCT---TTC-----CCSS
T ss_pred             cccCCcCEEEEEecCC-cHHHHHHHH-hCCCEEEEEcCcHHHhhhhhHHHHhCCccccceEeccH---HHc-----cccc
Confidence            3466899999999875 666666565 68778999998764221   2223332 1  2332222   111     1112


Q ss_pred             CCcCEEEEC-CCC--------hHHHHHHHHHhhcCCceEE
Q 017457          253 GGADYCFEC-IGL--------TSVMNDAFNSSREGWGKTV  283 (371)
Q Consensus       253 gg~d~vid~-~g~--------~~~~~~~~~~l~~~~G~~v  283 (371)
                      ..+|+++.. .+.        ...++..-+.|+|+ |.++
T Consensus        99 ~~~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~-G~ii  137 (316)
T d1oria_          99 EKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPD-GLIF  137 (316)
T ss_dssp             SCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEE-EEEE
T ss_pred             ceeEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCC-eEEE
Confidence            278999742 221        12345556789997 8875

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.51  E-value=0.078  Score=42.16  Aligned_cols=40  Identities=23%  Similarity=0.321  Sum_probs=35.0

Q ss_pred             CeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 017457          185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK  225 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~  225 (371)
                      ++|.|+|+|.+|...++++...|+ +|+..+++++.++.+.
T Consensus         5 kkvaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~a~   44 (192)
T d1f0ya2           5 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQTEDILAKSK   44 (192)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHH
T ss_pred             EEEEEECcCHHHHHHHHHHHhCCC-cEEEEECChHHHHHHH
Confidence            589999999999998888889999 9999999998766553

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=93.51  E-value=0.029  Score=45.79  Aligned_cols=93  Identities=18%  Similarity=0.245  Sum_probs=61.5

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHH---cCCCeEEEEcCChhHHHHHHH----hCcc---eEEcCCCCCCccHHHHHHHh
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARL---NRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIKEM  250 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~---~g~~~Vi~~~~~~~~~~~~~~----lga~---~v~~~~~~~~~~~~~~i~~~  250 (371)
                      ++++.+||=+|+|. |..+..+++.   .++ +|++++.+++-++.+++    .+..   +..+.+.          .+.
T Consensus        37 ~~~~~~vLDlGCGt-G~~~~~l~~~~~~~~~-~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~----------~~~  104 (225)
T d1im8a_          37 VTADSNVYDLGCSR-GAATLSARRNINQPNV-KIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDI----------RHV  104 (225)
T ss_dssp             CCTTCEEEEESCTT-CHHHHHHHHTCCCSSC-EEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCT----------TTC
T ss_pred             cCCCCEEEEeccch-hhHHHHHHHhhcCCCC-ceEEeCCCHHHHHHHHHHhHhhcccchhhhccchh----------hcc
Confidence            68899999999865 6666677764   477 99999999998888765    2221   2222111          111


Q ss_pred             hCCCcCEEEECCCC--------hHHHHHHHHHhhcCCceEEEEC
Q 017457          251 TDGGADYCFECIGL--------TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       251 ~~gg~d~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      ....+|+++-+..-        ...++.+.+.|+|+ |.++...
T Consensus       105 ~~~~~d~i~~~~~l~~~~~~d~~~~l~~i~~~Lkpg-G~li~~~  147 (225)
T d1im8a_         105 EIKNASMVILNFTLQFLPPEDRIALLTKIYEGLNPN-GVLVLSE  147 (225)
T ss_dssp             CCCSEEEEEEESCGGGSCGGGHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             ccccceeeEEeeeccccChhhHHHHHHHHHHhCCCC-ceeeccc
Confidence            22256766643221        13588999999998 9998764

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=93.50  E-value=0.08  Score=42.07  Aligned_cols=96  Identities=19%  Similarity=0.227  Sum_probs=60.3

Q ss_pred             cCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcceE--EcCCCCCCccHHHHHHHhhC
Q 017457          179 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDF--INPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       179 ~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~v--~~~~~~~~~~~~~~i~~~~~  252 (371)
                      ....++.+||-+|+| .|..+..+++ .|. +|++++.+++.++.+++    .+.+.+  ...+-   ..+      ...
T Consensus        26 ~~~~~~grvLDiGcG-~G~~~~~la~-~g~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~---~~~------~~~   93 (198)
T d2i6ga1          26 AKVVAPGRTLDLGCG-NGRNSLYLAA-NGY-DVTAWDKNPASMANLERIKAAEGLDNLQTDLVDL---NTL------TFD   93 (198)
T ss_dssp             HTTSCSCEEEEETCT-TSHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCT---TTC------CCC
T ss_pred             cccCCCCcEEEECCC-CCHHHHHHHH-Hhh-hhccccCcHHHHHHHHHHhhhccccchhhhheec---ccc------ccc
Confidence            333344589999987 4777777776 588 99999999988776654    344321  11111   010      012


Q ss_pred             CCcCEEEECCC-----Ch---HHHHHHHHHhhcCCceEEEECc
Q 017457          253 GGADYCFECIG-----LT---SVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       253 gg~d~vid~~g-----~~---~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      +.||+|+...-     ..   ..++.+.+.|+++ |.++....
T Consensus        94 ~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~~~~~~~  135 (198)
T d2i6ga1          94 GEYDFILSTVVMMFLEAQTIPGLIANMQRCTKPG-GYNLIVAA  135 (198)
T ss_dssp             CCEEEEEEESCGGGSCTTHHHHHHHHHHHTEEEE-EEEEEEEE
T ss_pred             ccccEEEEeeeeecCCHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence            37899985321     11   2467788889998 98877643

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=93.42  E-value=0.1  Score=41.19  Aligned_cols=91  Identities=15%  Similarity=0.081  Sum_probs=60.2

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      -.+.+|.|+|.|.+|...+++++..|. +|+..++........+..+....        .++.+.+.     ..|+|.-+
T Consensus        42 l~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~~~~~~--------~~l~~~l~-----~sD~v~~~  107 (188)
T d2naca1          42 LEAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNLTWH--------ATREDMYP-----VCDVVTLN  107 (188)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTCEEC--------SSHHHHGG-----GCSEEEEC
T ss_pred             ccccceeeccccccchhhhhhhhccCc-eEEEEeecccccccccccccccc--------CCHHHHHH-----hccchhhc
Confidence            357899999999999999999999999 99999976554444444443211        12222221     46788765


Q ss_pred             CCChH-----HHHHHHHHhhcCCceEEEECc
Q 017457          262 IGLTS-----VMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       262 ~g~~~-----~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      .+-..     .-...++.|+++ ..+|.++.
T Consensus       108 ~plt~~T~~li~~~~l~~mk~g-a~lIN~aR  137 (188)
T d2naca1         108 CPLHPETEHMINDETLKLFKRG-AYIVNTAR  137 (188)
T ss_dssp             SCCCTTTTTCBSHHHHTTSCTT-EEEEECSC
T ss_pred             ccccccchhhhHHHHHHhCCCC-CEEEecCc
Confidence            54211     125667778776 67776653

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=93.35  E-value=0.073  Score=43.86  Aligned_cols=89  Identities=15%  Similarity=0.194  Sum_probs=58.4

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eEEcCCCCCCccHHHHHHHhh-CCCc
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMT-DGGA  255 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~~~~~~~~~~~~~~i~~~~-~gg~  255 (371)
                      .++++||=+|+|. |..+..+++ .|. +|++++.+++-++.+++    .|.. .++..      +.    .++. .+.|
T Consensus        36 ~~~~~vLDiGCG~-G~~~~~l~~-~g~-~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~------d~----~~~~~~~~f  102 (246)
T d1y8ca_          36 LVFDDYLDLACGT-GNLTENLCP-KFK-NTWAVDLSQEMLSEAENKFRSQGLKPRLACQ------DI----SNLNINRKF  102 (246)
T ss_dssp             CCTTEEEEETCTT-STTHHHHGG-GSS-EEEEECSCHHHHHHHHHHHHHTTCCCEEECC------CG----GGCCCSCCE
T ss_pred             CCCCeEEEEeCcC-CHHHHHHHH-hCC-ccEeeccchhhhhhccccccccCccceeecc------ch----hhhcccccc
Confidence            4567899999875 677777776 477 89999999987777654    3322 23321      11    1222 3379


Q ss_pred             CEEEECCCC------h----HHHHHHHHHhhcCCceEEE
Q 017457          256 DYCFECIGL------T----SVMNDAFNSSREGWGKTVI  284 (371)
Q Consensus       256 d~vid~~g~------~----~~~~~~~~~l~~~~G~~v~  284 (371)
                      |+|+...+.      .    ..++.+.+.|+++ |.++.
T Consensus       103 D~i~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~~i~  140 (246)
T d1y8ca_         103 DLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEG-GVFIF  140 (246)
T ss_dssp             EEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEE-EEEEE
T ss_pred             cccceeeeeeeccCCHHHHHHHHHHHHHhCCCC-eEEEE
Confidence            999864331      1    1467788889998 98774

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=93.27  E-value=0.081  Score=44.43  Aligned_cols=94  Identities=14%  Similarity=0.146  Sum_probs=64.3

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHHhCcc-eEEcCCCCCCccHHHHHHHhhCCCcCEE
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKFGIT-DFINPATCGDKTVSQVIKEMTDGGADYC  258 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~lga~-~v~~~~~~~~~~~~~~i~~~~~gg~d~v  258 (371)
                      ..++.+||=+|+|. |..+..+++.. +. ++++++.+++..+.+++.... .++..+-   .++     .+..+.+|+|
T Consensus        82 ~~~~~~iLDiGcG~-G~~~~~l~~~~~~~-~~~giD~s~~~~~~a~~~~~~~~~~~~d~---~~l-----~~~~~sfD~v  151 (268)
T d1p91a_          82 DDKATAVLDIGCGE-GYYTHAFADALPEI-TTFGLDVSKVAIKAAAKRYPQVTFCVASS---HRL-----PFSDTSMDAI  151 (268)
T ss_dssp             CTTCCEEEEETCTT-STTHHHHHHTCTTS-EEEEEESCHHHHHHHHHHCTTSEEEECCT---TSC-----SBCTTCEEEE
T ss_pred             CCCCCEEEEeCCCC-cHHHHHHHHHCCCC-EEEEecchHhhhhhhhcccccccceeeeh---hhc-----cCCCCCEEEE
Confidence            46778899999866 66677777765 56 899999999988888764432 2221111   111     1122379999


Q ss_pred             EECCCChHHHHHHHHHhhcCCceEEEEC
Q 017457          259 FECIGLTSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       259 id~~g~~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      +....-.. +.++.+.|+|+ |.++...
T Consensus       152 ~~~~~~~~-~~e~~rvLkpg-G~l~~~~  177 (268)
T d1p91a_         152 IRIYAPCK-AEELARVVKPG-GWVITAT  177 (268)
T ss_dssp             EEESCCCC-HHHHHHHEEEE-EEEEEEE
T ss_pred             eecCCHHH-HHHHHHHhCCC-cEEEEEe
Confidence            96544334 78999999998 9988764

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=93.26  E-value=0.23  Score=39.11  Aligned_cols=98  Identities=11%  Similarity=0.126  Sum_probs=62.2

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc----eEEcCCCCCCccHHHH
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT----DFINPATCGDKTVSQV  246 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~----~v~~~~~~~~~~~~~~  246 (371)
                      +.+.....++++||=+|+|. |..++.+++ .+. +|++++.++...+.+++    .+..    .++..+-      .  
T Consensus        44 Li~~l~~~~~~~VLDiGcG~-G~~~~~la~-~~~-~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~------~--  112 (194)
T d1dusa_          44 LVENVVVDKDDDILDLGCGY-GVIGIALAD-EVK-STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDL------Y--  112 (194)
T ss_dssp             HHHHCCCCTTCEEEEETCTT-SHHHHHHGG-GSS-EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECST------T--
T ss_pred             HHHhCCcCCCCeEEEEeecC-ChhHHHHHh-hcc-ccceeeeccccchhHHHHHHHhCCccceEEEEEcch------h--
Confidence            44566788999999998755 555666665 355 99999999988777754    2321    2222221      1  


Q ss_pred             HHHhhCCCcCEEEECCC---Ch----HHHHHHHHHhhcCCceEEEE
Q 017457          247 IKEMTDGGADYCFECIG---LT----SVMNDAFNSSREGWGKTVIL  285 (371)
Q Consensus       247 i~~~~~gg~d~vid~~g---~~----~~~~~~~~~l~~~~G~~v~~  285 (371)
                       ..+.++.+|+|+....   +.    ..++.+.+.|+++ |.++..
T Consensus       113 -~~~~~~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~  156 (194)
T d1dusa_         113 -ENVKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDN-GEIWVV  156 (194)
T ss_dssp             -TTCTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             -hhhccCCceEEEEcccEEecchhhhhHHHHHHHhcCcC-cEEEEE
Confidence             1122337999995322   21    2367788899998 987653

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=93.21  E-value=0.35  Score=36.96  Aligned_cols=131  Identities=13%  Similarity=0.083  Sum_probs=76.3

Q ss_pred             eEEEEcCChHHHH-HHHHHHHc-CCCeEEEEcCChhHHHHH-HHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457          186 TVAIFGLGAVGLA-VAEGARLN-RASKIIGVDINPEKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  262 (371)
Q Consensus       186 ~VLI~G~g~~G~~-ai~la~~~-g~~~Vi~~~~~~~~~~~~-~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~  262 (371)
                      +|.|+|+|.+|.- .+...+.. +. .++++++++++.+.+ ++++...+++.-+       +.+    ...+|+|+-++
T Consensus         3 rvgiiG~G~~~~~~~~~~l~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-------~ll----~~~iD~V~I~t   70 (167)
T d1xeaa1           3 KIAMIGLGDIAQKAYLPVLAQWPDI-ELVLCTRNPKVLGTLATRYRVSATCTDYR-------DVL----QYGVDAVMIHA   70 (167)
T ss_dssp             EEEEECCCHHHHHTHHHHHTTSTTE-EEEEECSCHHHHHHHHHHTTCCCCCSSTT-------GGG----GGCCSEEEECS
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCc-EEEEEECCHHHHHHHHHhcccccccccHH-------Hhc----ccccceecccc
Confidence            5789999999954 45555444 55 777888888776665 4477654443211       111    12689999999


Q ss_pred             CChHHHHHHHHHhhcCCceEEEECccCCCCce-ecCHHHHhc--CceE-EEeeccCCCchhhHHHHHHHHHcCCCC
Q 017457          263 GLTSVMNDAFNSSREGWGKTVILGVEMHGSPI-SLNSIEILK--GRSV-CGTYFGGLKPRSDIATLAQKYLDKELN  334 (371)
Q Consensus       263 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~-~~~~~~~~~--~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~~~  334 (371)
                      +.....+.+..++..+  .=+++.-+...... ......+..  +..+ .|.   + +....+.++++.+..|++.
T Consensus        71 p~~~H~~~~~~al~~g--k~V~~EKP~~~~~~e~~~l~~~a~~~~~~~~vg~---~-r~~~~~~~~~~~~~~G~ig  140 (167)
T d1xeaa1          71 ATDVHSTLAAFFLHLG--IPTFVDKPLAASAQECENLYELAEKHHQPLYVGF---N-GFDAMVQDWLQVAAAGKLP  140 (167)
T ss_dssp             CGGGHHHHHHHHHHTT--CCEEEESCSCSSHHHHHHHHHHHHHTTCCEEEEC---G-THHHHHHHHHHHHHHTCCC
T ss_pred             cccccccccccccccc--cccccCCCCcCCHHHHHHHHHHHHHcCCEEEEEe---C-cCCHHHHHHHHHhhcCCCC
Confidence            9887788888989874  44555432111100 011111222  3333 232   1 2235577788888888653

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=93.15  E-value=0.4  Score=36.01  Aligned_cols=88  Identities=13%  Similarity=0.103  Sum_probs=55.2

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCCh
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT  265 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~~  265 (371)
                      +|-|+|.|.+|...+.-+...|. .|++.++...+....+..+.... +.       ..+.+.     ..|+||-|+...
T Consensus         2 kIgiIG~G~mG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~-~~-------~~e~~~-----~~diIi~~v~~~   67 (152)
T d1i36a2           2 RVGFIGFGEVAQTLASRLRSRGV-EVVTSLEGRSPSTIERARTVGVT-ET-------SEEDVY-----SCPVVISAVTPG   67 (152)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTC-EEEECCTTCCHHHHHHHHHHTCE-EC-------CHHHHH-----TSSEEEECSCGG
T ss_pred             EEEEEcHHHHHHHHHHHHHHCCC-eEEEEcCchhHHHHHhhhccccc-cc-------HHHHHh-----hcCeEEEEecCc
Confidence            57888999999998888888898 88888877666555544443322 11       112221     578888888877


Q ss_pred             HHHHHHHHHhhcCCceEEEECc
Q 017457          266 SVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       266 ~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      .....+......-...+++++.
T Consensus        68 ~~~~~~~~~~~~~~~~~id~st   89 (152)
T d1i36a2          68 VALGAARRAGRHVRGIYVDINN   89 (152)
T ss_dssp             GHHHHHHHHHTTCCSEEEECSC
T ss_pred             hHHHHHHhhcccCCceeeccCc
Confidence            6444444443332135555543

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.11  E-value=0.067  Score=38.67  Aligned_cols=36  Identities=17%  Similarity=0.231  Sum_probs=31.5

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      +.+++++|+|+|.+|+=+++.+..+|. +|+++.+.+
T Consensus        20 ~~p~~v~IiGgG~ig~E~A~~l~~~G~-~Vtlve~~~   55 (117)
T d1ebda2          20 EVPKSLVVIGGGYIGIELGTAYANFGT-KVTILEGAG   55 (117)
T ss_dssp             SCCSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             hcCCeEEEECCCccceeeeeeeccccc-EEEEEEecc
Confidence            345889999999999999999999999 899998654

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=93.10  E-value=0.54  Score=35.17  Aligned_cols=79  Identities=13%  Similarity=0.013  Sum_probs=53.9

Q ss_pred             CeEEEEc-CChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCC-C-cCEEEEC
Q 017457          185 STVAIFG-LGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-G-ADYCFEC  261 (371)
Q Consensus       185 ~~VLI~G-~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g-g-~d~vid~  261 (371)
                      ++|.|+| .|.+|...+..++..|+ .|.+.+++.+........+++.++....  .......+.+..+. . =.+++|+
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~v~~~~~--~~~~~~v~~~~~~~~~~~~iiiD~   86 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGY-PISILDREDWAVAESILANADVVIVSVP--INLTLETIERLKPYLTENMLLADL   86 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTTCGGGHHHHHTTCSEEEECSC--GGGHHHHHHHHGGGCCTTSEEEEC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCC-CcEecccccccccchhhhhccccccccc--hhhheeeeecccccccCCceEEEe
Confidence            5899999 59999999999999999 8999998877666555556666554333  13344444444433 2 2477787


Q ss_pred             CCChH
Q 017457          262 IGLTS  266 (371)
Q Consensus       262 ~g~~~  266 (371)
                      +....
T Consensus        87 ~Svk~   91 (152)
T d2pv7a2          87 TSVKR   91 (152)
T ss_dssp             CSCCH
T ss_pred             cccCH
Confidence            76443

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=93.09  E-value=0.08  Score=38.35  Aligned_cols=38  Identities=8%  Similarity=0.084  Sum_probs=33.1

Q ss_pred             CCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          180 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       180 ~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      .++..++|+|+|+|.+|+=.+..+..+|. +|+++.+.+
T Consensus        18 ~l~~p~~v~IiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~   55 (117)
T d1onfa2          18 NIKESKKIGIVGSGYIAVELINVIKRLGI-DSYIFARGN   55 (117)
T ss_dssp             TCCCCSEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSS
T ss_pred             ccCCCCEEEEECCchHHHHHHHHHHhccc-cceeeehhc
Confidence            45567899999999999999999999999 999998653

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=93.03  E-value=0.072  Score=44.50  Aligned_cols=32  Identities=19%  Similarity=0.394  Sum_probs=28.5

Q ss_pred             eEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          186 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       186 ~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      +|||+|+ |.+|...+..++..|. .|+++++++
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~-~Vi~~~r~~   35 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNV-EVIPTDVQD   35 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSE-EEEEECTTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEeechh
Confidence            5899998 9999999999999999 999998653

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.00  E-value=0.15  Score=43.89  Aligned_cols=32  Identities=19%  Similarity=0.113  Sum_probs=29.1

Q ss_pred             CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457          185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN  217 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~  217 (371)
                      +++||+|+ |.+|...+..+...|+ +|+++++.
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~-~V~~~~r~   34 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGY-EVHGLIRR   34 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcC-EEEEEECC
Confidence            68999998 9999999999999999 99999874

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=92.92  E-value=1.2  Score=33.21  Aligned_cols=96  Identities=9%  Similarity=-0.033  Sum_probs=59.8

Q ss_pred             CCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHH-HHHHH---hCcceEEcCCCCCCccHHHHHHHhhCCCcCEEE
Q 017457          184 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKF-EIGKK---FGITDFINPATCGDKTVSQVIKEMTDGGADYCF  259 (371)
Q Consensus       184 g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~-~~~~~---lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vi  259 (371)
                      -++++|.|.|.+|...++.+...|. .|++++.++++. +.+.+   .|...+ ..+.    .-.+.+++.--..+|.++
T Consensus         3 knHiII~G~g~~g~~l~~~L~~~~~-~v~vId~d~~~~~~~~~~~~~~~~~vi-~Gd~----~d~~~L~~a~i~~a~~vi   76 (153)
T d1id1a_           3 KDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNADVI-PGDS----NDSSVLKKAGIDRCRAIL   76 (153)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTCEEE-ESCT----TSHHHHHHHTTTTCSEEE
T ss_pred             CCEEEEECCCHHHHHHHHHHHHcCC-CEEEEeccchhHHHHHHHhhcCCcEEE-EccC----cchHHHHHhccccCCEEE
Confidence            3579999999999999999999999 788888776543 23332   345433 3322    223344444333789999


Q ss_pred             ECCCChHH---HHHHHHHhhcCCceEEEEC
Q 017457          260 ECIGLTSV---MNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       260 d~~g~~~~---~~~~~~~l~~~~G~~v~~g  286 (371)
                      -++++...   .-...+.+.+. -+++.-.
T Consensus        77 ~~~~~d~~n~~~~~~~r~~~~~-~~iia~~  105 (153)
T d1id1a_          77 ALSDNDADNAFVVLSAKDMSSD-VKTVLAV  105 (153)
T ss_dssp             ECSSCHHHHHHHHHHHHHHTSS-SCEEEEC
T ss_pred             EccccHHHHHHHHHHHHHhCCC-CceEEEE
Confidence            88886541   22333445554 5555443

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=92.87  E-value=0.12  Score=37.68  Aligned_cols=41  Identities=22%  Similarity=0.240  Sum_probs=34.1

Q ss_pred             HHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          177 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       177 ~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      ....-.++++|+|+|+|.+|+-+++.+..+|. +|+++.+.+
T Consensus        23 ~~~~~~~~k~vvViGgG~iG~E~A~~l~~~g~-~Vtlie~~~   63 (123)
T d1nhpa2          23 QKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGK-KVTVIDILD   63 (123)
T ss_dssp             HHHTCTTCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             HHhhccCCCEEEEECChHHHHHHHHHhhccce-EEEEEEecC
Confidence            34444567899999999999999999999999 899997653

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.83  E-value=0.067  Score=43.78  Aligned_cols=37  Identities=19%  Similarity=0.124  Sum_probs=33.1

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      ...+++|+|+|+|+.|+.++..++..|. +|++++.++
T Consensus        46 ~~~~k~VvIIGaGpAGl~aA~~l~~~G~-~v~l~E~~~   82 (233)
T d1djqa3          46 TKNKDSVLIVGAGPSGSEAARVLMESGY-TVHLTDTAE   82 (233)
T ss_dssp             CSSCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             ccCCceEEEEcccHHHHHHHHHHHHhcc-ceeeEeecc
Confidence            4577899999999999999999999999 999998655

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.83  E-value=0.045  Score=44.85  Aligned_cols=75  Identities=17%  Similarity=0.224  Sum_probs=45.7

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHHhCcceE-EcCCCCCCccHHHHHHHhhCCCcCEEE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMTDGGADYCF  259 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~gg~d~vi  259 (371)
                      ++++|||+|+ |.+|...++.+...|. .+|+++.+++.+...-..-..... .|..+     . +.+.+... ++|+++
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~-----~-~~~~~~~~-~~d~vi   85 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEK-----L-DDYASAFQ-GHDVGF   85 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGG-----G-GGGGGGGS-SCSEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeecccc-----c-cccccccc-cccccc
Confidence            3478999998 9999999998877774 479999876543222111112222 22211     1 11222222 799999


Q ss_pred             ECCCC
Q 017457          260 ECIGL  264 (371)
Q Consensus       260 d~~g~  264 (371)
                      .+.+.
T Consensus        86 ~~~~~   90 (232)
T d2bkaa1          86 CCLGT   90 (232)
T ss_dssp             ECCCC
T ss_pred             ccccc
Confidence            99875

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.73  E-value=0.082  Score=45.23  Aligned_cols=43  Identities=14%  Similarity=0.125  Sum_probs=33.4

Q ss_pred             CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--HHHHHHHhC
Q 017457          185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE--KFEIGKKFG  228 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~--~~~~~~~lg  228 (371)
                      ++|||+|+ |.+|...+..+...|+ +|+++++...  ..+.++.++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~l~~~~   46 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELG   46 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcccHHHHHHhc
Confidence            58999998 9999999998888899 9999986442  334454444

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=92.71  E-value=0.046  Score=44.85  Aligned_cols=36  Identities=17%  Similarity=0.246  Sum_probs=31.7

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK  220 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~  220 (371)
                      ++++||+|+ +++|.+.++.+...|+ +|+++++++++
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~   37 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGY-RVVVLDLRREG   37 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCccc
Confidence            478999998 9999999999999999 99999987654

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=92.65  E-value=0.26  Score=42.53  Aligned_cols=74  Identities=14%  Similarity=0.137  Sum_probs=46.8

Q ss_pred             CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHH--HHHHh-CcceEEcCCCCCCccHHHHHHHhhCCCcCEE
Q 017457          183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFE--IGKKF-GITDFINPATCGDKTVSQVIKEMTDGGADYC  258 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~--~~~~l-ga~~v~~~~~~~~~~~~~~i~~~~~gg~d~v  258 (371)
                      +.++|||+|+ |.+|...+..+...|. +|+++.++..+..  .+... |++ ++..+-   .+..+.+..... +.|.+
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~v~-~~~gD~---~d~~~~~~~a~~-~~~~~   75 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGH-HVRAQVHSLKGLIAEELQAIPNVT-LFQGPL---LNNVPLMDTLFE-GAHLA   75 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCSCSHHHHHHHTSTTEE-EEESCC---TTCHHHHHHHHT-TCSEE
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCC-eEEEEECCcchhhhhhhcccCCCE-EEEeeC---CCcHHHHHHHhc-CCceE
Confidence            5689999998 9999999999999999 8999988665432  23332 444 332222   122223333333 67777


Q ss_pred             EECC
Q 017457          259 FECI  262 (371)
Q Consensus       259 id~~  262 (371)
                      +...
T Consensus        76 ~~~~   79 (350)
T d1xgka_          76 FINT   79 (350)
T ss_dssp             EECC
T ss_pred             Eeec
Confidence            7543

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=92.53  E-value=0.13  Score=44.30  Aligned_cols=74  Identities=15%  Similarity=0.212  Sum_probs=45.3

Q ss_pred             eEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh-CcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCC
Q 017457          186 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG  263 (371)
Q Consensus       186 ~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l-ga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g  263 (371)
                      +|||+|+ |.+|...++.+...|..+|++++....+...+.+. ... ++..+-.+..++.+.+.+    ++|+|+.+.+
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~-~i~~Di~~~~~~~~~~~~----~~d~Vih~a~   76 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFH-FVEGDISIHSEWIEYHVK----KCDVVLPLVA   76 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEE-EEECCTTTCSHHHHHHHH----HCSEEEECBC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeE-EEECccCChHHHHHHHHh----CCCccccccc
Confidence            5999998 99999999888778843899998765554443322 222 232211011233332222    6899999877


Q ss_pred             C
Q 017457          264 L  264 (371)
Q Consensus       264 ~  264 (371)
                      -
T Consensus        77 ~   77 (342)
T d2blla1          77 I   77 (342)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.51  E-value=0.33  Score=41.87  Aligned_cols=31  Identities=19%  Similarity=0.097  Sum_probs=27.3

Q ss_pred             CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC
Q 017457          185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDI  216 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~  216 (371)
                      +.|||+|+ |-+|...+..+...|. +|+++++
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~-~V~~~d~   33 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGY-DCVVADN   33 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-eEEEEEC
Confidence            67999998 9999999999888999 8998863

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.50  E-value=0.1  Score=45.15  Aligned_cols=94  Identities=20%  Similarity=0.252  Sum_probs=53.1

Q ss_pred             HcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HHhCcc---eEEcCCCCCCccHHHHHHHh
Q 017457          178 VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT---DFINPATCGDKTVSQVIKEM  250 (371)
Q Consensus       178 ~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~---~v~~~~~~~~~~~~~~i~~~  250 (371)
                      .....+|++||-+|+|. |.++..+|+ .|+++|++++.++ ..+.+    ++.+..   .++..+-   .++     .+
T Consensus        33 ~~~~~~~~~VLDlGcGt-G~ls~~aa~-~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~---~~l-----~~  101 (328)
T d1g6q1_          33 NKDLFKDKIVLDVGCGT-GILSMFAAK-HGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKL---EDV-----HL  101 (328)
T ss_dssp             HHHHHTTCEEEEETCTT-SHHHHHHHH-TCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCT---TTS-----CC
T ss_pred             ccccCCcCEEEEeCCCC-CHHHHHHHH-hCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeeh---hhc-----cC
Confidence            34567899999999864 566654444 6877999999775 22333    333421   2332221   111     11


Q ss_pred             hCCCcCEEEECC-C----C----hHHHHHHHHHhhcCCceEE
Q 017457          251 TDGGADYCFECI-G----L----TSVMNDAFNSSREGWGKTV  283 (371)
Q Consensus       251 ~~gg~d~vid~~-g----~----~~~~~~~~~~l~~~~G~~v  283 (371)
                      ....+|+|+... +    .    ...+...-+.|+|+ |.++
T Consensus       102 ~~~~~D~i~se~~~~~~~~e~~~~~~~~a~~r~Lkpg-G~ii  142 (328)
T d1g6q1_         102 PFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEG-GLIF  142 (328)
T ss_dssp             SSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEE-EEEE
T ss_pred             cccceeEEEEEecceeeccchhHHHHHHHHHhccCCC-eEEE
Confidence            223799998532 2    1    11244445789997 8764

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=92.47  E-value=0.15  Score=40.26  Aligned_cols=82  Identities=18%  Similarity=0.181  Sum_probs=55.0

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcc------eEEcCCCC-CCccHHHHHHHhhCCCcCEE
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT------DFINPATC-GDKTVSQVIKEMTDGGADYC  258 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~------~v~~~~~~-~~~~~~~~i~~~~~gg~d~v  258 (371)
                      +|.|+|+|..|.+.+..+-..|. +|+...++++..+.+.+-+..      .-+. +.. -..++.+.+.     +.|++
T Consensus         9 KI~ViGaG~wGtAlA~~La~~g~-~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~-~~i~~t~~l~~a~~-----~ad~i   81 (189)
T d1n1ea2           9 KAVVFGSGAFGTALAMVLSKKCR-EVCVWHMNEEEVRLVNEKRENVLFLKGVQLA-SNITFTSDVEKAYN-----GAEII   81 (189)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTEE-EEEEECSCHHHHHHHHHHTBCTTTSTTCBCC-TTEEEESCHHHHHT-----TCSCE
T ss_pred             eEEEECCCHHHHHHHHHHHHcCC-eEEEEEecHHHHHHHhhcccccccccccccc-cccccchhhhhccC-----CCCEE
Confidence            69999999999998888877787 899999999888877653321      0010 000 0022333322     68999


Q ss_pred             EECCCChHHHHHHHHHh
Q 017457          259 FECIGLTSVMNDAFNSS  275 (371)
Q Consensus       259 id~~g~~~~~~~~~~~l  275 (371)
                      +-+++... +...++.+
T Consensus        82 iiavPs~~-~~~~~~~~   97 (189)
T d1n1ea2          82 LFVIPTQF-LRGFFEKS   97 (189)
T ss_dssp             EECSCHHH-HHHHHHHH
T ss_pred             EEcCcHHH-HHHHHHHH
Confidence            99999766 66666554

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=92.42  E-value=0.41  Score=40.81  Aligned_cols=97  Identities=19%  Similarity=0.158  Sum_probs=64.1

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcc----------eEEcCCCCCCccHHHHHHHhh
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT----------DFINPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~----------~v~~~~~~~~~~~~~~i~~~~  251 (371)
                      ...++|||+|+|. |..+-.+++.....+|.+++.+++=.+.++++-..          .++.      .+..+.+++ +
T Consensus       105 ~~pk~VLIiGgG~-G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i------~Da~~~l~~-~  176 (312)
T d2b2ca1         105 PDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFC------GDGFEFLKN-H  176 (312)
T ss_dssp             SSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEEC------SCHHHHHHH-C
T ss_pred             CCCCeEEEeCCCc-hHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEE------chHHHHHHh-C
Confidence            5568999998866 44555677777766999999999888888774210          2221      344555554 4


Q ss_pred             CCCcCEEE-ECCCC---------hHHHHHHHHHhhcCCceEEEECc
Q 017457          252 DGGADYCF-ECIGL---------TSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       252 ~gg~d~vi-d~~g~---------~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      .+.+|+|| |....         ..-++.+.++|+++ |.++.-+.
T Consensus       177 ~~~yDvII~D~~dp~~~~~~L~t~eFy~~~~~~L~~~-Gi~v~q~~  221 (312)
T d2b2ca1         177 KNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKED-GILSSQGE  221 (312)
T ss_dssp             TTCEEEEEECCC-------------HHHHHHHHEEEE-EEEEEECC
T ss_pred             CCCCCEEEEcCCCCCCcchhhhhHHHHHHHHhhcCCC-cEEEEecC
Confidence            44899998 43221         12367788899998 98887653

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=92.33  E-value=0.072  Score=45.48  Aligned_cols=38  Identities=18%  Similarity=0.181  Sum_probs=32.7

Q ss_pred             CCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          180 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       180 ~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      .....++|+|+|+|..|+.++..+...|. +|++++.++
T Consensus        26 ~~~~pkkV~IIGaG~aGLsaA~~L~~~G~-~V~vlE~~~   63 (370)
T d2iida1          26 ATSNPKHVVIVGAGMAGLSAAYVLAGAGH-QVTVLEASE   63 (370)
T ss_dssp             CCSSCCEEEEECCBHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            34566899999999999999998888899 999998654

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=92.28  E-value=0.37  Score=40.29  Aligned_cols=73  Identities=15%  Similarity=0.119  Sum_probs=45.4

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-----HHHH---HHHhCcceEEcCCCCCCccHHHHHHHhhCCC
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE-----KFEI---GKKFGITDFINPATCGDKTVSQVIKEMTDGG  254 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~-----~~~~---~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg  254 (371)
                      -++|||+|+ |.+|...+..+...|. +|+++.++..     +.+.   +...+++.+ ..+-   .+. +.+.+... +
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v-~~d~---~d~-~~~~~~~~-~   75 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGH-PTYVLFRPEVVSNIDKVQMLLYFKQLGAKLI-EASL---DDH-QRLVDALK-Q   75 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCSCCSSCHHHHHHHHHHHTTTCEEE-CCCS---SCH-HHHHHHHT-T
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCCcccchhHHHHHhhhccCCcEEE-Eeec---ccc-hhhhhhcc-C
Confidence            456999998 9999999998888998 8998887542     2222   233444433 2221   122 23333333 5


Q ss_pred             cCEEEECCC
Q 017457          255 ADYCFECIG  263 (371)
Q Consensus       255 ~d~vid~~g  263 (371)
                      .+.++.+.+
T Consensus        76 ~~~~~~~~~   84 (312)
T d1qyda_          76 VDVVISALA   84 (312)
T ss_dssp             CSEEEECCC
T ss_pred             cchhhhhhh
Confidence            778887665

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=92.23  E-value=0.1  Score=37.65  Aligned_cols=34  Identities=21%  Similarity=0.178  Sum_probs=30.7

Q ss_pred             CCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          184 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       184 g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      .++|+|+|+|.+|+=+++.++.+|. +|+++.+.+
T Consensus        21 p~~vvIiGgG~ig~E~A~~l~~~G~-~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVGAGYIGVELGGVINGLGA-KTHLFEMFD   54 (116)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCEEEEECCChhhHHHHHHhhcccc-EEEEEeecc
Confidence            4789999999999999999999999 999998754

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=92.20  E-value=0.37  Score=41.33  Aligned_cols=72  Identities=15%  Similarity=0.175  Sum_probs=44.3

Q ss_pred             eEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC----ChhHHHHHHHh---CcceEEcCCCCCCccHHHHHHHhhCC-CcC
Q 017457          186 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDI----NPEKFEIGKKF---GITDFINPATCGDKTVSQVIKEMTDG-GAD  256 (371)
Q Consensus       186 ~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~----~~~~~~~~~~l---ga~~v~~~~~~~~~~~~~~i~~~~~g-g~d  256 (371)
                      +|||+|+ |.+|...+..+...|. .|+++++    ........+.+   .... +..+-   .+. +.+.+.... ++|
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~Dl---~d~-~~l~~~~~~~~~d   75 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGH-DVIILDNLCNSKRSVLPVIERLGGKHPTF-VEGDI---RNE-ALMTEILHDHAID   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCTTHHHHHHHHHTSCCEE-EECCT---TCH-HHHHHHHHHTTCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcchhhHHHHHhhcCCCCEE-EEeec---CCH-HHHHHHHhccCCC
Confidence            5999998 9999999999999999 8999864    22222333222   2322 22221   222 233333323 799


Q ss_pred             EEEECCC
Q 017457          257 YCFECIG  263 (371)
Q Consensus       257 ~vid~~g  263 (371)
                      +||++.+
T Consensus        76 ~ViHlAa   82 (338)
T d1udca_          76 TVIHFAG   82 (338)
T ss_dssp             EEEECCS
T ss_pred             EEEECCC
Confidence            9999865

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.11  E-value=0.077  Score=44.24  Aligned_cols=42  Identities=19%  Similarity=0.105  Sum_probs=33.7

Q ss_pred             CCCeEEEEcC-ChHHHHHHH-HHHH--cCCCeEEEEcCChhHHHHHH
Q 017457          183 VGSTVAIFGL-GAVGLAVAE-GARL--NRASKIIGVDINPEKFEIGK  225 (371)
Q Consensus       183 ~g~~VLI~G~-g~~G~~ai~-la~~--~g~~~Vi~~~~~~~~~~~~~  225 (371)
                      .|+.+||+|+ +++|.+.++ ||+.  .|+ +|+.+++++++.+.+.
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~-~Vv~~~r~~~~l~~~~   50 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLK   50 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCC-EEEEEECCHHHHHHHH
Confidence            5788899998 899998654 5653  689 9999999998877653

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.07  E-value=0.12  Score=37.67  Aligned_cols=35  Identities=23%  Similarity=0.380  Sum_probs=31.1

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      ..++++|+|+|.+|+=.++++..+|. +|+++.+.+
T Consensus        22 ~p~~~vIiG~G~ig~E~A~~l~~lG~-~Vtii~~~~   56 (122)
T d1v59a2          22 IPKRLTIIGGGIIGLEMGSVYSRLGS-KVTVVEFQP   56 (122)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCCeEEEECCCchHHHHHHHHHhhCc-ceeEEEecc
Confidence            34799999999999999999999999 999998654

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=92.02  E-value=0.41  Score=40.07  Aligned_cols=95  Identities=18%  Similarity=0.202  Sum_probs=60.4

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhC-c------------c---eEEcCCCCCCccHH
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG-I------------T---DFINPATCGDKTVS  244 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lg-a------------~---~v~~~~~~~~~~~~  244 (371)
                      ..+.++|||+|+|. |..+-.+++. +..+|.+++.+++=.+.++++- .            +   +++.      .+..
T Consensus        70 ~~~p~~vLiiG~G~-G~~~~~~l~~-~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~------~Da~  141 (276)
T d1mjfa_          70 HPKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTI------GDGF  141 (276)
T ss_dssp             SSCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEE------SCHH
T ss_pred             CCCCceEEEecCCc-hHHHHHHHHh-CCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEE------ChHH
Confidence            35668999998754 3333444554 4448999999988777776532 1            1   2332      2344


Q ss_pred             HHHHHhhCCCcCEEE-ECCCC---------hHHHHHHHHHhhcCCceEEEEC
Q 017457          245 QVIKEMTDGGADYCF-ECIGL---------TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       245 ~~i~~~~~gg~d~vi-d~~g~---------~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      +.+++  .+++|+|| |....         ...++.+.++|+++ |.++.-+
T Consensus       142 ~~l~~--~~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~-Gv~v~q~  190 (276)
T d1mjfa_         142 EFIKN--NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNP-GIYVTQA  190 (276)
T ss_dssp             HHHHH--CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             HHHhc--cCCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCC-ceEEEec
Confidence            44443  34899997 55442         22477889999998 9877643

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=92.00  E-value=0.18  Score=43.44  Aligned_cols=97  Identities=15%  Similarity=0.130  Sum_probs=60.3

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcce--EEcCCCCCCccHHHHHHHhh-CC
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITD--FINPATCGDKTVSQVIKEMT-DG  253 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~--v~~~~~~~~~~~~~~i~~~~-~g  253 (371)
                      ..+|++||=.++|. |..++.+|+ .+. +|+.++.++...+.+++    .|.+.  ++.      .+..+.++.+. .+
T Consensus       143 ~~~g~rVLDl~~gt-G~~s~~~a~-g~~-~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~------~d~~~~~~~~~~~~  213 (318)
T d1wxxa2         143 RFRGERALDVFSYA-GGFALHLAL-GFR-EVVAVDSSAEALRRAEENARLNGLGNVRVLE------ANAFDLLRRLEKEG  213 (318)
T ss_dssp             GCCEEEEEEETCTT-THHHHHHHH-HEE-EEEEEESCHHHHHHHHHHHHHTTCTTEEEEE------SCHHHHHHHHHHTT
T ss_pred             HhCCCeeeccCCCC-cHHHHHHHh-cCC-cEEeecchHHHHHHHHHHHHHcCCCCcceee------ccHHHHhhhhHhhh
Confidence            45789999887643 333445554 244 99999999998888765    45432  222      23333344332 23


Q ss_pred             -CcCEEE-ECCC----C----------hHHHHHHHHHhhcCCceEEEECc
Q 017457          254 -GADYCF-ECIG----L----------TSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       254 -g~d~vi-d~~g----~----------~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                       .||+|+ |.-.    .          ...+..+++.|+|+ |.++.+..
T Consensus       214 ~~fD~Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpG-G~Lv~~sc  262 (318)
T d1wxxa2         214 ERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEG-GILATASC  262 (318)
T ss_dssp             CCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEE-EEEEEEEC
T ss_pred             cCCCEEEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEeC
Confidence             899998 4211    1          01356778889998 99888764

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=91.96  E-value=0.15  Score=42.10  Aligned_cols=38  Identities=39%  Similarity=0.318  Sum_probs=32.4

Q ss_pred             HcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcC
Q 017457          178 VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI  216 (371)
Q Consensus       178 ~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~  216 (371)
                      ...--.|++|+|.|.|.+|..+++++...|+ +|++++.
T Consensus        25 ~~~~l~g~~v~IqGfGnVG~~~a~~L~~~Ga-kvv~vsD   62 (242)
T d1v9la1          25 LWGGIEGKTVAIQGMGNVGRWTAYWLEKMGA-KVIAVSD   62 (242)
T ss_dssp             HHSCCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEEEC
T ss_pred             cCCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEeec
Confidence            3344578999999999999999999999999 8887763

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=91.90  E-value=0.14  Score=37.91  Aligned_cols=39  Identities=21%  Similarity=0.268  Sum_probs=34.1

Q ss_pred             cCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          179 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       179 ~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      ..++++++|+|+|+|.+|+=++..++.+|. +|.++.+.+
T Consensus        30 ~~~~~~k~v~VIGgG~iG~E~A~~l~~~g~-~Vtvie~~~   68 (133)
T d1q1ra2          30 RQLIADNRLVVIGGGYIGLEVAATAIKANM-HVTLLDTAA   68 (133)
T ss_dssp             HTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             HhhccCCEEEEECCchHHHHHHHHHHhhCc-ceeeeeecc
Confidence            346778999999999999999999999999 999998654

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.90  E-value=0.42  Score=37.14  Aligned_cols=89  Identities=17%  Similarity=0.240  Sum_probs=60.1

Q ss_pred             eEEEEcCChHHHHHHHHHHHc-CCCeEEEE-cCChhHHHH-HHHhCcc---eEEcCCCCCCccHHHHHHHhhCCCcCEEE
Q 017457          186 TVAIFGLGAVGLAVAEGARLN-RASKIIGV-DINPEKFEI-GKKFGIT---DFINPATCGDKTVSQVIKEMTDGGADYCF  259 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~-g~~~Vi~~-~~~~~~~~~-~~~lga~---~v~~~~~~~~~~~~~~i~~~~~gg~d~vi  259 (371)
                      ++.|+|+|.+|...+...+.. +. +++++ ++++++.+. .++++..   .++       .++.+.+.   ...+|+|+
T Consensus         3 ki~iIG~G~~g~~~~~~l~~~~~~-~i~ai~d~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ll~---~~~iD~v~   71 (184)
T d1ydwa1           3 RIGVMGCADIARKVSRAIHLAPNA-TISGVASRSLEKAKAFATANNYPESTKIH-------GSYESLLE---DPEIDALY   71 (184)
T ss_dssp             EEEEESCCTTHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHHHHTTCCTTCEEE-------SSHHHHHH---CTTCCEEE
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCC-EEEEEEeCCccccccchhccccccceeec-------CcHHHhhh---ccccceee
Confidence            578999999998888777765 66 66644 667766554 3455532   233       23433332   22799999


Q ss_pred             ECCCChHHHHHHHHHhhcCCceEEEECc
Q 017457          260 ECIGLTSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       260 d~~g~~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      -+++....++.+..++..  |.=+.+.-
T Consensus        72 I~tp~~~h~~~~~~~l~~--g~~v~~EK   97 (184)
T d1ydwa1          72 VPLPTSLHVEWAIKAAEK--GKHILLEK   97 (184)
T ss_dssp             ECCCGGGHHHHHHHHHTT--TCEEEECS
T ss_pred             ecccchhhcchhhhhhhc--cceeeccc
Confidence            999988778888888887  45566653

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.83  E-value=0.2  Score=42.50  Aligned_cols=96  Identities=14%  Similarity=0.175  Sum_probs=62.3

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCc-------c---eEEcCCCCCCccHHHHHHHhh
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI-------T---DFINPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga-------~---~v~~~~~~~~~~~~~~i~~~~  251 (371)
                      ...++|||+|+|. |..+-.+++..+..+|++++.+++=.+.+++.-.       +   +++.      .+..+.+++ +
T Consensus        88 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~------~Da~~~l~~-~  159 (295)
T d1inla_          88 PNPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVI------ANGAEYVRK-F  159 (295)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE------SCHHHHGGG-C
T ss_pred             CCCceEEEecCCc-hHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEh------hhHHHHHhc-C
Confidence            4568999998755 4455567777766689999999987777766321       1   2222      234444443 3


Q ss_pred             CCCcCEEE-ECCCC----------hHHHHHHHHHhhcCCceEEEEC
Q 017457          252 DGGADYCF-ECIGL----------TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       252 ~gg~d~vi-d~~g~----------~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      .+.+|++| |+...          ...++.+.++|+++ |.++.-.
T Consensus       160 ~~~yDvIi~D~~dp~~~~~~~L~t~efy~~~~~~L~~~-Gi~v~q~  204 (295)
T d1inla_         160 KNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKED-GVFSAET  204 (295)
T ss_dssp             SSCEEEEEEEC----------CCSHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             CCCCCEEEEcCCCCCcCchhhhccHHHHHHHHhhcCCC-cEEEEec
Confidence            34899998 54321          22477889999998 9887654

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=91.80  E-value=0.4  Score=41.21  Aligned_cols=37  Identities=22%  Similarity=0.127  Sum_probs=30.0

Q ss_pred             CCeEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChhHH
Q 017457          184 GSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINPEKF  221 (371)
Q Consensus       184 g~~VLI~G~---g~~G~~ai~la~~~g~~~Vi~~~~~~~~~  221 (371)
                      ++..||+|+   .++|.+.++.+...|+ +|+.+.++....
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA-~V~i~~~~~~~~   41 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNV-KIIFGIWPPVYN   41 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEECGGGHH
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCC-EEEEEeCchhhh
Confidence            577899995   3899999999999999 898887665543

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.79  E-value=0.021  Score=49.32  Aligned_cols=31  Identities=23%  Similarity=0.294  Sum_probs=27.8

Q ss_pred             CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC
Q 017457          185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDI  216 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~  216 (371)
                      ++|||+|+ |.+|...+..+...|. +|+++++
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~-~V~~~d~   33 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGH-EVTVVDN   33 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeC
Confidence            68999998 9999999998888999 8999874

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.77  E-value=0.36  Score=40.63  Aligned_cols=97  Identities=16%  Similarity=0.166  Sum_probs=63.1

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCc----------ceEEcCCCCCCccHHHHHHHh
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI----------TDFINPATCGDKTVSQVIKEM  250 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga----------~~v~~~~~~~~~~~~~~i~~~  250 (371)
                      ....++|||+|+|. |..+-.+++..+..+|++++-+++=.+.+++.-.          -+++.      .+..+.+++ 
T Consensus        76 ~~~pk~vLiiGgG~-G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~------~Da~~~l~~-  147 (285)
T d2o07a1          76 HPNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHV------GDGFEFMKQ-  147 (285)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE------SCHHHHHHT-
T ss_pred             CcCcCeEEEeCCCc-hHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEE------ccHHHHHhc-
Confidence            45668999998765 5555567777666699999999887777765321          12222      233444443 


Q ss_pred             hCCCcCEEE-ECCCC---------hHHHHHHHHHhhcCCceEEEEC
Q 017457          251 TDGGADYCF-ECIGL---------TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       251 ~~gg~d~vi-d~~g~---------~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      +.+.+|+|+ |....         ...++.+.++|+++ |.++.-+
T Consensus       148 ~~~~yDvIi~D~~~p~~~~~~L~t~eF~~~~~~~L~~~-Gi~v~q~  192 (285)
T d2o07a1         148 NQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKED-GVLCCQG  192 (285)
T ss_dssp             CSSCEEEEEEECC-----------CHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CCCCCCEEEEcCCCCCCcccccccHHHHHHHHHhcCCC-CeEEEec
Confidence            334899998 64431         12367888899998 9887654

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=91.69  E-value=0.11  Score=40.94  Aligned_cols=40  Identities=28%  Similarity=0.362  Sum_probs=34.3

Q ss_pred             CeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 017457          185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK  225 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~  225 (371)
                      ++|.|+|+|.+|...+.++...|+ +|++.+++++.++.+.
T Consensus         5 ~~vaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~~~   44 (186)
T d1wdka3           5 KQAAVLGAGIMGGGIAYQSASKGT-PILMKDINEHGIEQGL   44 (186)
T ss_dssp             SSEEEECCHHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHH
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHHhhhh
Confidence            579999999999988888888899 8999999998766543

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=91.67  E-value=0.073  Score=40.39  Aligned_cols=85  Identities=8%  Similarity=-0.147  Sum_probs=53.2

Q ss_pred             EEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCChHH
Q 017457          188 AIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSV  267 (371)
Q Consensus       188 LI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~~~~  267 (371)
                      -++|+|.+|.+.+..++..+. .+.+..++.++.+.+.+.+.....+..+     .        -...|+||-|+.... 
T Consensus         3 gfIG~G~mg~~l~~~L~~~~~-~~~v~~R~~~~~~~l~~~~~~~~~~~~~-----~--------~~~~DiVil~v~d~~-   67 (153)
T d2i76a2           3 NFVGTGTLTRFFLECLKDRYE-IGYILSRSIDRARNLAEVYGGKAATLEK-----H--------PELNGVVFVIVPDRY-   67 (153)
T ss_dssp             EEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCCCCCSSCC-----C--------CC---CEEECSCTTT-
T ss_pred             EEEeCcHHHHHHHHHHHhCCC-EEEEEeCChhhhcchhhcccccccchhh-----h--------hccCcEEEEeccchh-
Confidence            467999999988776654333 4457889999998887766543332222     1        015799999999877 


Q ss_pred             HHHHHHHhhcCCceEEEECc
Q 017457          268 MNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       268 ~~~~~~~l~~~~G~~v~~g~  287 (371)
                      +....+.++.....++.++.
T Consensus        68 i~~v~~~l~~~~~ivi~~s~   87 (153)
T d2i76a2          68 IKTVANHLNLGDAVLVHCSG   87 (153)
T ss_dssp             HHHHHTTTCCSSCCEEECCS
T ss_pred             hhHHHhhhcccceeeeeccc
Confidence            78888888754144555543

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=91.67  E-value=0.14  Score=39.92  Aligned_cols=40  Identities=25%  Similarity=0.221  Sum_probs=34.0

Q ss_pred             eEEEE-cCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 017457          186 TVAIF-GLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK  226 (371)
Q Consensus       186 ~VLI~-G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~  226 (371)
                      +|.|+ |+|.+|.+.++.+...|+ +|++..+++++.+.+.+
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~-~V~l~~R~~e~~~~l~~   42 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGH-EIVVGSRREEKAEAKAA   42 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHH
Confidence            57888 559999999999999999 99999999988766533

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=91.63  E-value=0.97  Score=34.72  Aligned_cols=96  Identities=18%  Similarity=0.201  Sum_probs=60.8

Q ss_pred             eEEEEcCChHHHHHHHHHHHcC-CCeEEEE-cCCh-hHHHHHHHhCcceEEcCCCCCCccHHHHHHHhh----------C
Q 017457          186 TVAIFGLGAVGLAVAEGARLNR-ASKIIGV-DINP-EKFEIGKKFGITDFINPATCGDKTVSQVIKEMT----------D  252 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g-~~~Vi~~-~~~~-~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~----------~  252 (371)
                      +|.|.|-|-+|...+..+.... . .++.+ +.++ +....+.+.+.+......+     ......+..          .
T Consensus         4 rIaINGfGRIGR~v~Ral~~~~di-eiVaINd~~~~~~~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~   77 (172)
T d2czca2           4 KVGVNGYGTIGKRVAYAVTKQDDM-ELIGITKTKPDFEAYRAKELGIPVYAASEE-----FIPRFEKEGFEVAGTLNDLL   77 (172)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTE-EEEEEEESSCSHHHHHHHHTTCCEEESSGG-----GHHHHHHHTCCCSCBHHHHH
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCc-eEEEEecCCChHHHHHhhhcCceeeccccc-----ceeeecccCccccchhhhhh
Confidence            6889999999998888776443 4 55544 3333 3445566666543322111     111111100          1


Q ss_pred             CCcCEEEECCCChHHHHHHHHHhhcCCceEEEECcc
Q 017457          253 GGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       253 gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      .++|+|+||+|.-...+.+-.++..+ -+.|..+..
T Consensus        78 ~~vDvViEcTG~f~~~~~~~~hl~~G-~k~Vi~s~~  112 (172)
T d2czca2          78 EKVDIIVDATPGGIGAKNKPLYEKAG-VKAIFQGGE  112 (172)
T ss_dssp             TTCSEEEECCSTTHHHHHHHHHHHHT-CEEEECTTS
T ss_pred             ccCCEEEECCCCCCCHHHHHHHHHcC-CCEEEECCC
Confidence            27999999999888788888899997 888888763

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=91.51  E-value=0.14  Score=37.07  Aligned_cols=35  Identities=17%  Similarity=0.258  Sum_probs=30.7

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      .+++++|+|+|.+|+=.++....+|. +|+++.+.+
T Consensus        21 ~p~~i~IiG~G~ig~E~A~~l~~~G~-~Vtiv~~~~   55 (119)
T d3lada2          21 VPGKLGVIGAGVIGLELGSVWARLGA-EVTVLEAMD   55 (119)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             CCCeEEEECCChHHHHHHHHHHHcCC-ceEEEEeec
Confidence            45889999999999999999999999 888887543

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=91.47  E-value=0.12  Score=42.22  Aligned_cols=35  Identities=17%  Similarity=0.177  Sum_probs=30.8

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  217 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~  217 (371)
                      ..-++|+|+|+|..|++++..+...|. +|+++++.
T Consensus         4 ~~~~kVvVIGaGiaGl~~A~~L~~~G~-~V~vier~   38 (268)
T d1c0pa1           4 HSQKRVVVLGSGVIGLSSALILARKGY-SVHILARD   38 (268)
T ss_dssp             CCSCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred             CCCCcEEEECccHHHHHHHHHHHHCCC-CEEEEeCC
Confidence            445689999999999999999999999 89999864

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=91.47  E-value=1.1  Score=34.24  Aligned_cols=95  Identities=18%  Similarity=0.187  Sum_probs=54.0

Q ss_pred             CCCCCCeEEEEcC--ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eEEcCCCCCCccHHHHHHHhhC
Q 017457          180 GVEVGSTVAIFGL--GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       180 ~~~~g~~VLI~G~--g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~~~~~~~~~~~~~~i~~~~~  252 (371)
                      .+.+|.+||=.++  |.+|.   . |...|+ +|+.++.+++..+.+++    ++.. .+...+.   ..+... .....
T Consensus        38 ~~~~g~~vLDl~~G~G~~~i---~-a~~~ga-~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~---d~~~~~-~~~~~  108 (171)
T d1ws6a1          38 RYPRRGRFLDPFAGSGAVGL---E-AASEGW-EAVLVEKDPEAVRLLKENVRRTGLGARVVALPV---EVFLPE-AKAQG  108 (171)
T ss_dssp             HCTTCCEEEEETCSSCHHHH---H-HHHTTC-EEEEECCCHHHHHHHHHHHHHHTCCCEEECSCH---HHHHHH-HHHTT
T ss_pred             cccCCCeEEEeccccchhhh---h-hhhccc-hhhhcccCHHHHhhhhHHHHhhccccceeeeeh---hccccc-ccccC
Confidence            4678899988865  55544   3 334688 89999999998877654    5543 4443322   122111 22223


Q ss_pred             CCcCEEE-EC---CCChHHHHHHHH--HhhcCCceEEE
Q 017457          253 GGADYCF-EC---IGLTSVMNDAFN--SSREGWGKTVI  284 (371)
Q Consensus       253 gg~d~vi-d~---~g~~~~~~~~~~--~l~~~~G~~v~  284 (371)
                      ..||+|| |.   .+....+..+..  .++++ |.++.
T Consensus       109 ~~fD~If~DPPY~~~~~~~l~~l~~~~ll~~~-g~ivi  145 (171)
T d1ws6a1         109 ERFTVAFMAPPYAMDLAALFGELLASGLVEAG-GLYVL  145 (171)
T ss_dssp             CCEEEEEECCCTTSCTTHHHHHHHHHTCEEEE-EEEEE
T ss_pred             CccceeEEccccccCHHHHHHHHHHcCCcCCC-eEEEE
Confidence            3899997 42   222232444443  36665 66553

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=91.46  E-value=0.16  Score=39.00  Aligned_cols=95  Identities=16%  Similarity=0.164  Sum_probs=63.6

Q ss_pred             ccccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCc
Q 017457          163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK  241 (371)
Q Consensus       163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~  241 (371)
                      .+||+.......+....---.|++|+|+|- ..+|.-...++...|+ +|+.+.+..                      .
T Consensus        16 ~~PcTp~aI~~lL~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~ga-tVt~~h~~t----------------------~   72 (166)
T d1b0aa1          16 LRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGC-TTTVTHRFT----------------------K   72 (166)
T ss_dssp             SCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTC-EEEEECSSC----------------------S
T ss_pred             CCCchHHHHHHHHHHcCcccccceEEEEeccccccHHHHHHHHHhhc-ccccccccc----------------------c
Confidence            455555544443333333457999999997 7899999999999999 888776432                      2


Q ss_pred             cHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECcc
Q 017457          242 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE  288 (371)
Q Consensus       242 ~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~  288 (371)
                      +..+.++     .+|+++.++|.+..+.  -+.++++ ..++++|..
T Consensus        73 ~l~~~~~-----~ADivI~a~G~p~~i~--~~~vk~g-~vvIDvGi~  111 (166)
T d1b0aa1          73 NLRHHVE-----NADLLIVAVGKPGFIP--GDWIKEG-AIVIDVGIN  111 (166)
T ss_dssp             CHHHHHH-----HCSEEEECSCCTTCBC--TTTSCTT-CEEEECCCE
T ss_pred             hhHHHHh-----hhhHhhhhccCccccc--ccccCCC-cEEEecCce
Confidence            3322332     4789999999776332  2356776 788888864

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=91.34  E-value=0.55  Score=35.24  Aligned_cols=68  Identities=16%  Similarity=0.120  Sum_probs=43.7

Q ss_pred             CCCCeEEEEcC--ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc---eEEcCCCCCCccHHHHHHHhhC
Q 017457          182 EVGSTVAIFGL--GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       182 ~~g~~VLI~G~--g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~---~v~~~~~~~~~~~~~~i~~~~~  252 (371)
                      -+|++||=+++  |.+|+.|    ..+|+++|+.++.+++..+.+++    ++..   .++.      .+..+.+. ...
T Consensus        13 ~~g~~vlDl~~GtG~~~iea----~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~------~D~~~~l~-~~~   81 (152)
T d2esra1          13 FNGGRVLDLFAGSGGLAIEA----VSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLK------MEAERAID-CLT   81 (152)
T ss_dssp             CCSCEEEEETCTTCHHHHHH----HHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEEC------SCHHHHHH-HBC
T ss_pred             CCCCeEEEcCCccCHHHHHH----HHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhc------cccccccc-ccc
Confidence            46888888865  5555532    34788899999999887776654    4542   3333      24444443 334


Q ss_pred             CCcCEEEE
Q 017457          253 GGADYCFE  260 (371)
Q Consensus       253 gg~d~vid  260 (371)
                      +.+|+||-
T Consensus        82 ~~fDiIf~   89 (152)
T d2esra1          82 GRFDLVFL   89 (152)
T ss_dssp             SCEEEEEE
T ss_pred             cccceeEe
Confidence            48999983

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.24  E-value=2.1  Score=36.90  Aligned_cols=58  Identities=19%  Similarity=0.207  Sum_probs=42.6

Q ss_pred             HHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEc--CChhHHHHHHHhCcceEE
Q 017457          176 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVD--INPEKFEIGKKFGITDFI  233 (371)
Q Consensus       176 ~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~--~~~~~~~~~~~lga~~v~  233 (371)
                      .+...+++++.|+...+|..|.+.+..|+.+|++-++++.  .+++|.+.++.+|++-+.
T Consensus        89 ~~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~~~GA~vv~  148 (355)
T d1jbqa_          89 ERDGTLKPGDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVR  148 (355)
T ss_dssp             HHHTCSCTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEE
T ss_pred             HHcCCcccCceEEEecccchhhHHHHHHHhccCCeEEEeeccchHHHHHHHHhcCCeEEE
Confidence            3445567777766667799999999999999994444443  245788889999987544

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=91.16  E-value=0.18  Score=42.30  Aligned_cols=38  Identities=13%  Similarity=0.076  Sum_probs=28.5

Q ss_pred             eEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHHHH
Q 017457          186 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIG  224 (371)
Q Consensus       186 ~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~-~~~~~~~~  224 (371)
                      .+||+|+ +++|.+.++.+...|+ +|+++++ ++++.+.+
T Consensus         4 VAlITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~~~   43 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANAL   43 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCCHHHHHHH
Confidence            3578887 8999999999989999 8877654 44444433

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=91.12  E-value=0.15  Score=36.57  Aligned_cols=34  Identities=21%  Similarity=0.268  Sum_probs=30.4

Q ss_pred             CCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          184 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       184 g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      +++++|+|+|.+|+=+++.+..+|. +|+++.+.+
T Consensus        21 p~~vvIiGgG~~G~E~A~~l~~~g~-~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGGGYIGLELGIAYRKLGA-QVSVVEARE   54 (115)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             CCeEEEECCCHHHHHHHHHHhhccc-ceEEEeeec
Confidence            4899999999999999999999999 899998654

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.11  E-value=0.17  Score=36.92  Aligned_cols=34  Identities=15%  Similarity=0.027  Sum_probs=30.8

Q ss_pred             CCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          184 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       184 g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      .++++|+|+|.+|+=.+..++.+|. +|+++.+++
T Consensus        22 pk~vvIvGgG~iG~E~A~~l~~~G~-~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGAGYIAVEMAGILSALGS-KTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCEEEEEcCCccHHHHHHHHhcCCc-EEEEEeecc
Confidence            4789999999999999999999999 999998754

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=91.10  E-value=0.27  Score=41.26  Aligned_cols=96  Identities=15%  Similarity=0.204  Sum_probs=64.6

Q ss_pred             cCCCCCCeEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCChhHHHHHHH----hCcce-EEcCCCCCCccHHHHHHHhh
Q 017457          179 AGVEVGSTVAIFGLGAVGLAVAEGARLN--RASKIIGVDINPEKFEIGKK----FGITD-FINPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       179 ~~~~~g~~VLI~G~g~~G~~ai~la~~~--g~~~Vi~~~~~~~~~~~~~~----lga~~-v~~~~~~~~~~~~~~i~~~~  251 (371)
                      .++.++.+||=+|+|. |..+..+++..  +. +|++++.+++..+.+++    .+.+. +...+-   .++     . .
T Consensus        23 ~~~~~~~~ILDiGcG~-G~~~~~la~~~~~~~-~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d~---~~~-----~-~   91 (281)
T d2gh1a1          23 WKITKPVHIVDYGCGY-GYLGLVLMPLLPEGS-KYTGIDSGETLLAEARELFRLLPYDSEFLEGDA---TEI-----E-L   91 (281)
T ss_dssp             SCCCSCCEEEEETCTT-THHHHHHTTTSCTTC-EEEEEECCHHHHHHHHHHHHSSSSEEEEEESCT---TTC-----C-C
T ss_pred             hccCCcCEEEEecCcC-CHHHHHHHHhCCCCC-EEEEEecchhHhhhhhccccccccccccccccc---ccc-----c-c
Confidence            4577889999999875 88888888875  45 89999999988777765    33321 221111   111     1 1


Q ss_pred             CCCcCEEEECCC-----C-hHHHHHHHHHhhcCCceEEEEC
Q 017457          252 DGGADYCFECIG-----L-TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       252 ~gg~d~vid~~g-----~-~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      .+.+|+|+....     + ...++.+.+.|+++ |.++...
T Consensus        92 ~~~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~lii~~  131 (281)
T d2gh1a1          92 NDKYDIAICHAFLLHMTTPETMLQKMIHSVKKG-GKIICFE  131 (281)
T ss_dssp             SSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             cCCceEEEEehhhhcCCCHHHHHHHHHHHcCcC-cEEEEEE
Confidence            237999985422     2 23578899999998 9888754

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.07  E-value=0.081  Score=44.56  Aligned_cols=32  Identities=22%  Similarity=0.267  Sum_probs=29.3

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      .|+|+|+|+.|++++..++..|. +|+++++.+
T Consensus         4 ~V~IvGaGp~Gl~~A~~L~~~G~-~v~vlE~~~   35 (292)
T d1k0ia1           4 QVAIIGAGPSGLLLGQLLHKAGI-DNVILERQT   35 (292)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTC-CEEEECSSC
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            59999999999999999999999 899998765

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=91.04  E-value=1.2  Score=32.56  Aligned_cols=28  Identities=18%  Similarity=0.372  Sum_probs=21.0

Q ss_pred             eEEEEcC-ChHHHHHHHHHHH-cCCCeEEEE
Q 017457          186 TVAIFGL-GAVGLAVAEGARL-NRASKIIGV  214 (371)
Q Consensus       186 ~VLI~G~-g~~G~~ai~la~~-~g~~~Vi~~  214 (371)
                      +|.|.|+ |-+|.+.+..... -+. .+++.
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~-~l~~~   30 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDL-TLSAE   30 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTS-EEEEE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCC-EEEEE
Confidence            5889997 9999998887754 456 55443

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=91.02  E-value=1.7  Score=36.17  Aligned_cols=57  Identities=18%  Similarity=0.151  Sum_probs=41.1

Q ss_pred             HHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcC---ChhHHHHHHHhCcceEE
Q 017457          176 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI---NPEKFEIGKKFGITDFI  233 (371)
Q Consensus       176 ~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~---~~~~~~~~~~lga~~v~  233 (371)
                      .+...+.++.+|+...+|..|++++..|+.+|. +.+++.+   ++.+.+.++.+|++-++
T Consensus        52 ~~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~G~-~~~i~~p~~~~~~k~~~~~~~GA~v~~  111 (292)
T d2bhsa1          52 EKRGEIKPGDVLIEATSGNTGIALAMIAALKGY-RMKLLMPDNMSQERRAAMRAYGAELIL  111 (292)
T ss_dssp             HHTTSCCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEEEESCCCHHHHHHHHHTTCEEEE
T ss_pred             HHhCCcCCCceeeeecccchhHHHHHHHHhcCc-ceEeeeccCchhhhhHHHHHhCCCcce
Confidence            344556666666666779999999999999999 4444432   55678888889987443

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=90.90  E-value=0.11  Score=37.79  Aligned_cols=37  Identities=19%  Similarity=0.321  Sum_probs=32.4

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE  219 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~  219 (371)
                      +.+++++|+|+|.+|+=.++....+|. +|+++.+++.
T Consensus        23 ~~p~~~viiG~G~iglE~A~~~~~~G~-~Vtvi~~~~~   59 (123)
T d1dxla2          23 EIPKKLVVIGAGYIGLEMGSVWGRIGS-EVTVVEFASE   59 (123)
T ss_dssp             SCCSEEEESCCSHHHHHHHHHHHHHTC-EEEEECSSSS
T ss_pred             ccCCeEEEEccchHHHHHHHHHHhcCC-eEEEEEEccc
Confidence            345899999999999999999999999 9999987653

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.86  E-value=0.11  Score=42.98  Aligned_cols=33  Identities=21%  Similarity=0.251  Sum_probs=28.6

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      .|+|+|+|..|++++.+++..|...|.++++++
T Consensus         3 ~V~IvGaG~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           3 DILIAGAGIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            689999999999999999999975788887654

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=90.85  E-value=0.11  Score=41.47  Aligned_cols=86  Identities=20%  Similarity=0.181  Sum_probs=57.3

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI  262 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~  262 (371)
                      .|++|.|+|.|.+|...+++++..|. +|++.++...+..   ...    +..     .++.+.+.     ..|++.-++
T Consensus        44 ~~ktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~---~~~----~~~-----~~l~~l~~-----~~D~v~~~~  105 (199)
T d1dxya1          44 GQQTVGVMGTGHIGQVAIKLFKGFGA-KVIAYDPYPMKGD---HPD----FDY-----VSLEDLFK-----QSDVIDLHV  105 (199)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSSC---CTT----CEE-----CCHHHHHH-----HCSEEEECC
T ss_pred             cceeeeeeecccccccccccccccce-eeeccCCccchhh---hcc----hhH-----HHHHHHHH-----hcccceeee
Confidence            57899999999999999999999999 9999987543210   001    111     22333222     368887665


Q ss_pred             CC-hH----HHHHHHHHhhcCCceEEEECc
Q 017457          263 GL-TS----VMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       263 g~-~~----~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      .. +.    .-...++.|+++ ..+|..+.
T Consensus       106 plt~~T~~li~~~~l~~mk~~-a~lIN~aR  134 (199)
T d1dxya1         106 PGIEQNTHIINEAAFNLMKPG-AIVINTAR  134 (199)
T ss_dssp             CCCGGGTTSBCHHHHHHSCTT-EEEEECSC
T ss_pred             cccccccccccHHHhhccCCc-eEEEeccc
Confidence            53 22    125677889887 88887764

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=90.65  E-value=0.1  Score=42.57  Aligned_cols=33  Identities=15%  Similarity=0.299  Sum_probs=28.4

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      +|+|+|+|..|+.++..+...|.++|+++++++
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECCcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            489999999999999999889974699998654

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.60  E-value=0.078  Score=42.96  Aligned_cols=102  Identities=20%  Similarity=0.218  Sum_probs=59.8

Q ss_pred             HHHcCCCCCCeEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCChhHHHHHH----HhCcceEEcCCCCCCccHHHHHHH
Q 017457          176 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLN--RASKIIGVDINPEKFEIGK----KFGITDFINPATCGDKTVSQVIKE  249 (371)
Q Consensus       176 ~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~--g~~~Vi~~~~~~~~~~~~~----~lga~~v~~~~~~~~~~~~~~i~~  249 (371)
                      ....+..+.++||=+|.+. |..++.+|+++  +. +|+.++.+++..+.++    ..|...-+....   .+..+.+.+
T Consensus        49 ~~lv~~~kpk~ILEiGt~~-G~Sti~la~al~~~g-~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~---Gd~~e~l~~  123 (214)
T d2cl5a1          49 DAVIREYSPSLVLELGAYC-GYSAVRMARLLQPGA-RLLTMEMNPDYAAITQQMLNFAGLQDKVTILN---GASQDLIPQ  123 (214)
T ss_dssp             HHHHHHHCCSEEEEECCTT-SHHHHHHHTTCCTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEE---SCHHHHGGG
T ss_pred             HHHHHhhCCCEEEEEccCc-hhHHHHHHHhCCCcc-EEEEEeccHHHHHHHHHHHHHcCCCccceeee---ccccccccc
Confidence            3444556678999999754 66777788876  44 9999999988776664    356422111111   334444433


Q ss_pred             hh---C-CCcCEEE-ECCCChH----HHHHHHHHhhcCCceEE
Q 017457          250 MT---D-GGADYCF-ECIGLTS----VMNDAFNSSREGWGKTV  283 (371)
Q Consensus       250 ~~---~-gg~d~vi-d~~g~~~----~~~~~~~~l~~~~G~~v  283 (371)
                      +.   . +.+|++| |..-...    .+...++.++++ |.++
T Consensus       124 l~~~~~~~~~D~ifiD~~~~~~~~~~~l~~~~~lLkpG-GvIv  165 (214)
T d2cl5a1         124 LKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKG-TVLL  165 (214)
T ss_dssp             HHHHSCCCCEEEEEECSCGGGHHHHHHHHHHTTCEEEE-EEEE
T ss_pred             hhhcccccccceeeecccccccccHHHHHHHhCccCCC-cEEE
Confidence            32   2 2689887 5433322    133445568886 7543

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=90.59  E-value=0.31  Score=42.24  Aligned_cols=75  Identities=15%  Similarity=0.196  Sum_probs=45.8

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      .++-+|||+|+ |.+|...+..+...|. .|+++++...... ........+...+-   .+.. .+.+... ++|.|+.
T Consensus        13 ~~nMKILVTGgsGfIGs~lv~~L~~~g~-~V~~~d~~~~~~~-~~~~~~~~~~~~D~---~~~~-~~~~~~~-~~d~Vih   85 (363)
T d2c5aa1          13 SENLKISITGAGGFIASHIARRLKHEGH-YVIASDWKKNEHM-TEDMFCDEFHLVDL---RVME-NCLKVTE-GVDHVFN   85 (363)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCSSS-CGGGTCSEEEECCT---TSHH-HHHHHHT-TCSEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCCccch-hhhcccCcEEEeec---hhHH-HHHHHhh-cCCeEee
Confidence            35678999998 9999999999999999 8999875432211 11122222221121   2232 2333332 7999998


Q ss_pred             CCC
Q 017457          261 CIG  263 (371)
Q Consensus       261 ~~g  263 (371)
                      +.+
T Consensus        86 ~a~   88 (363)
T d2c5aa1          86 LAA   88 (363)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            764

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.54  E-value=0.17  Score=36.80  Aligned_cols=34  Identities=12%  Similarity=-0.051  Sum_probs=29.7

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  217 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~  217 (371)
                      ..++++|+|+|.+|+=.++.++.+|. +|+++.++
T Consensus        19 ~P~~vvIIGgG~iG~E~A~~l~~lG~-~Vtii~~~   52 (122)
T d1h6va2          19 CPGKTLVVGASYVALECAGFLAGIGL-DVTVMVRS   52 (122)
T ss_dssp             CCCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             CCCeEEEECCCccHHHHHHHHhhcCC-eEEEEEec
Confidence            34789999999999999999999999 78888753

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=90.47  E-value=0.066  Score=42.21  Aligned_cols=35  Identities=20%  Similarity=0.130  Sum_probs=30.3

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  217 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~  217 (371)
                      +++..|+|+|+|+.|+.|+..|..+|. +|+++++.
T Consensus         3 ~k~~dVvIIGGGpaGl~AA~~~ar~g~-~v~iie~~   37 (190)
T d1trba1           3 TKHSKLLILGSGPAGYTAAVYAARANL-QPVLITGM   37 (190)
T ss_dssp             EEEEEEEEECCSHHHHHHHHHHHTTTC-CCEEECCS
T ss_pred             CCCCcEEEECCCHHHHHHHHHHHHcCC-ceEEEEee
Confidence            356789999999999999999999999 88888754

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=90.46  E-value=0.18  Score=39.52  Aligned_cols=85  Identities=22%  Similarity=0.298  Sum_probs=58.6

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      -.|++|.|+|.|.+|...+++++.+|. +|++.++++..       +.....       .++.+.+    . ..|+|+.+
T Consensus        40 l~gk~vgIiG~G~IG~~va~~l~~~g~-~v~~~d~~~~~-------~~~~~~-------~~l~ell----~-~sDiv~~~   99 (181)
T d1qp8a1          40 IQGEKVAVLGLGEIGTRVGKILAALGA-QVRGFSRTPKE-------GPWRFT-------NSLEEAL----R-EARAAVCA   99 (181)
T ss_dssp             CTTCEEEEESCSTHHHHHHHHHHHTTC-EEEEECSSCCC-------SSSCCB-------SCSHHHH----T-TCSEEEEC
T ss_pred             ccCceEEEeccccccccceeeeecccc-ccccccccccc-------cceeee-------echhhhh----h-ccchhhcc
Confidence            358899999999999999999999999 99999876431       111111       1222222    1 57888876


Q ss_pred             CCCh-H----HHHHHHHHhhcCCceEEEECc
Q 017457          262 IGLT-S----VMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       262 ~g~~-~----~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      ++-. .    .-...++.|+++ ..+|..+.
T Consensus       100 ~pl~~~t~~li~~~~l~~mk~~-ailIN~~R  129 (181)
T d1qp8a1         100 LPLNKHTRGLVKYQHLALMAED-AVFVNVGR  129 (181)
T ss_dssp             CCCSTTTTTCBCHHHHTTSCTT-CEEEECSC
T ss_pred             cccccccccccccceeeecccc-ceEEeccc
Confidence            6532 1    125777888887 88887763

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=90.43  E-value=0.16  Score=41.05  Aligned_cols=97  Identities=10%  Similarity=0.003  Sum_probs=59.8

Q ss_pred             HHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcc--eEEcCCCCCCccHHHHHHHhhCC
Q 017457          176 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT--DFINPATCGDKTVSQVIKEMTDG  253 (371)
Q Consensus       176 ~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~--~v~~~~~~~~~~~~~~i~~~~~g  253 (371)
                      ....+..++++||=+|+|. |..+..+++ .|. +|++++.+++..+.+++...+  .++..+-   .++      ...+
T Consensus        13 ~~~~~~~~~~~VLDiGcG~-G~~~~~l~~-~g~-~v~giD~s~~~i~~a~~~~~~~~~~~~~~~---~~~------~~~~   80 (225)
T d2p7ia1          13 RAFTPFFRPGNLLELGSFK-GDFTSRLQE-HFN-DITCVEASEEAISHAQGRLKDGITYIHSRF---EDA------QLPR   80 (225)
T ss_dssp             HHHGGGCCSSCEEEESCTT-SHHHHHHTT-TCS-CEEEEESCHHHHHHHHHHSCSCEEEEESCG---GGC------CCSS
T ss_pred             HHhhhhCCCCcEEEEeCCC-cHHHHHHHH-cCC-eEEEEeCcHHHhhhhhcccccccccccccc---ccc------cccc
Confidence            3344556678899999866 666666654 477 899999999999988764332  2222211   111      0123


Q ss_pred             CcCEEEECC-----CChH-HHHHHH-HHhhcCCceEEEE
Q 017457          254 GADYCFECI-----GLTS-VMNDAF-NSSREGWGKTVIL  285 (371)
Q Consensus       254 g~d~vid~~-----g~~~-~~~~~~-~~l~~~~G~~v~~  285 (371)
                      .+|+|+..-     .++. .+..+. ++|+++ |.++..
T Consensus        81 ~fD~I~~~~vleh~~d~~~~l~~i~~~~Lk~g-G~l~i~  118 (225)
T d2p7ia1          81 RYDNIVLTHVLEHIDDPVALLKRINDDWLAEG-GRLFLV  118 (225)
T ss_dssp             CEEEEEEESCGGGCSSHHHHHHHHHHTTEEEE-EEEEEE
T ss_pred             ccccccccceeEecCCHHHHHHHHHHHhcCCC-ceEEEE
Confidence            799998422     2222 245565 568997 887654

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=90.40  E-value=0.19  Score=36.76  Aligned_cols=36  Identities=22%  Similarity=0.274  Sum_probs=31.5

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      +.+++++|+|+|.+|+=.++..+.+|. +|+++.+.+
T Consensus        24 ~~p~~vvIiGgG~IG~E~A~~~~~~G~-~Vtive~~~   59 (125)
T d1ojta2          24 EVPGKLLIIGGGIIGLEMGTVYSTLGS-RLDVVEMMD   59 (125)
T ss_dssp             CCCSEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             ccCCeEEEECCCHHHHHHHHHhhcCCC-EEEEEEeec
Confidence            446899999999999999999999999 999998643

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=90.29  E-value=0.13  Score=42.44  Aligned_cols=34  Identities=26%  Similarity=0.405  Sum_probs=29.1

Q ss_pred             CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017457          185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE  219 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~  219 (371)
                      +.|||+|+ +++|.+.++.+...|+ +|++++++++
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga-~V~~~~~~~~   36 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDA   36 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECChH
Confidence            46799997 9999999999999999 8999987643

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=90.20  E-value=0.18  Score=38.69  Aligned_cols=36  Identities=25%  Similarity=0.365  Sum_probs=29.8

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCC-eEEEEcCCh
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRAS-KIIGVDINP  218 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~-~Vi~~~~~~  218 (371)
                      .|++|+|+|+|..|+.+++.++.++.+ +|+++++.+
T Consensus         1 ~gkrivIvGgG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            478999999999999988888877742 788887655

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=90.20  E-value=0.57  Score=38.75  Aligned_cols=34  Identities=18%  Similarity=0.139  Sum_probs=29.9

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      -++|||+|+ |.+|...+..+...|. +|++++++.
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~-~V~~l~R~~   37 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGH-PTFLLVRES   37 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEECCC
Confidence            368999998 9999999999988999 899998754

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=90.07  E-value=1.1  Score=34.13  Aligned_cols=100  Identities=17%  Similarity=0.196  Sum_probs=58.6

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC--hhHHHHHHHhCc-------c-------eEEcCCCC---CCccHHHH
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDIN--PEKFEIGKKFGI-------T-------DFINPATC---GDKTVSQV  246 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~--~~~~~~~~~lga-------~-------~v~~~~~~---~~~~~~~~  246 (371)
                      +|.|.|-|-+|.++.+.+...+. .|+++-..  .+.+..+.+...       +       .+++.+..   ...+. +.
T Consensus         2 kigINGfGRIGR~~~R~l~~~~i-~iv~INd~~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p-~~   79 (168)
T d2g82a1           2 KVGINGFGRIGRQVFRILHSRGV-EVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDP-KE   79 (168)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTC-CEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSG-GG
T ss_pred             EEEEECCcHHHHHHHHHHhcCCC-EEEEECCCcchhhhhheeecccccCccccccccccceeEecceeEEEEecCCh-HH
Confidence            57889999999999998887888 66665422  234444433211       0       00110000   00111 11


Q ss_pred             HHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccC
Q 017457          247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM  289 (371)
Q Consensus       247 i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  289 (371)
                      + .|..-++|+|+||+|.-...+.+..++..+ ..-|.++.+.
T Consensus        80 i-~W~~~gvdiViEcTG~f~~~~~~~~hl~~g-akkViiSAP~  120 (168)
T d2g82a1          80 I-PWAEAGVGVVIESTGVFTDADKAKAHLEGG-AKKVIITAPA  120 (168)
T ss_dssp             C-CTGGGTEEEEEECSSSCCBHHHHTHHHHTT-CSEEEESSCC
T ss_pred             C-cccccCCceeEeccccccchHHhhhhhccc-cceeeecccc
Confidence            1 122228999999999877678888889876 6666666543

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=90.04  E-value=0.18  Score=42.65  Aligned_cols=36  Identities=28%  Similarity=0.295  Sum_probs=31.3

Q ss_pred             CCCeEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChh
Q 017457          183 VGSTVAIFGL-G--AVGLAVAEGARLNRASKIIGVDINPE  219 (371)
Q Consensus       183 ~g~~VLI~G~-g--~~G~~ai~la~~~g~~~Vi~~~~~~~  219 (371)
                      +|+++||+|+ |  ++|.+.++.+...|+ +|+++.+++.
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga-~Vvi~~~~~~   45 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGA-EILVGTWVPA   45 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEEEHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCchh
Confidence            6899999997 5  899999999999999 8998887654

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=89.97  E-value=0.15  Score=43.67  Aligned_cols=35  Identities=14%  Similarity=0.191  Sum_probs=30.5

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      +.++|+|+|||..|+.++..+...|. +|.+++.++
T Consensus         1 k~KKI~IIGaG~sGL~aA~~L~k~G~-~V~viEk~~   35 (314)
T d2bi7a1           1 KSKKILIVGAGFSGAVIGRQLAEKGH-QVHIIDQRD   35 (314)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSS
T ss_pred             CCCEEEEECCcHHHHHHHHHHHhCCC-CEEEEECCC
Confidence            35789999999999999999888898 999998654

>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Bacillus subtilis [TaxId: 1423]

Probab=89.93  E-value=1.7  Score=34.23  Aligned_cols=94  Identities=13%  Similarity=0.150  Sum_probs=60.5

Q ss_pred             CeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HHhCcceE--EcCCCCCCccHHHHHHHhhCCCcCEE
Q 017457          185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITDF--INPATCGDKTVSQVIKEMTDGGADYC  258 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~~v--~~~~~~~~~~~~~~i~~~~~gg~d~v  258 (371)
                      ..||=+|+|. |..++.+|+..--..+++++.++.....+    ++.|.+.+  +..      +.......+..+.+|.|
T Consensus        31 PlvLeIGcG~-G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~------Da~~l~~~~~~~~~d~v  103 (204)
T d2fcaa1          31 PIHIEVGTGK-GQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNI------DADTLTDVFEPGEVKRV  103 (204)
T ss_dssp             CEEEEECCTT-SHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECC------CGGGHHHHCCTTSCCEE
T ss_pred             ceEEEEEecC-cHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhccc------chhhhhcccCchhhhcc
Confidence            3556668876 88888899876333999999998876665    34565433  322      22222222333478877


Q ss_pred             EECCCC--------------hHHHHHHHHHhhcCCceEEEEC
Q 017457          259 FECIGL--------------TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       259 id~~g~--------------~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      +-....              +..++.+.+.|+|+ |.+....
T Consensus       104 ~i~fp~P~~k~~h~k~Rl~~~~~l~~~~r~Lkpg-G~l~i~T  144 (204)
T d2fcaa1         104 YLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKG-GSIHFKT  144 (204)
T ss_dssp             EEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTS-CEEEEEE
T ss_pred             ccccccccchhhhcchhhhHHHHHHHHHHhCCCC-cEEEEEE
Confidence            644333              24578899999998 9987764

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=89.68  E-value=1.7  Score=31.19  Aligned_cols=93  Identities=12%  Similarity=0.014  Sum_probs=61.5

Q ss_pred             CeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCC
Q 017457          185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL  264 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~  264 (371)
                      +.++|.|.|.+|...+..++  +. .|++++.++++.+.+...|...+. .+.    .-.+.+++..-..++.++-++.+
T Consensus         1 kHivI~G~g~~g~~l~~~L~--~~-~i~vi~~d~~~~~~~~~~~~~~i~-Gd~----~~~~~L~~a~i~~A~~vi~~~~~   72 (129)
T d2fy8a1           1 RHVVICGWSESTLECLRELR--GS-EVFVLAEDENVRKKVLRSGANFVH-GDP----TRVSDLEKANVRGARAVIVNLES   72 (129)
T ss_dssp             CCEEEESCCHHHHHHHHTSC--GG-GEEEEESCTTHHHHHHHTTCEEEE-SCT----TSHHHHHHTTCTTCSEEEECCSS
T ss_pred             CEEEEECCCHHHHHHHHHHc--CC-CCEEEEcchHHHHHHHhcCccccc-ccc----CCHHHHHHhhhhcCcEEEEeccc
Confidence            46899999999998777664  44 677888899988888888875443 322    22345555433378899887776


Q ss_pred             hH---HHHHHHHHhhcCCceEEEEC
Q 017457          265 TS---VMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       265 ~~---~~~~~~~~l~~~~G~~v~~g  286 (371)
                      ..   ..-...+.+.+. .+++...
T Consensus        73 d~~n~~~~~~~r~~~~~-~~iia~~   96 (129)
T d2fy8a1          73 DSETIHCILGIRKIDES-VRIIAEA   96 (129)
T ss_dssp             HHHHHHHHHHHHHHCSS-SCEEEEC
T ss_pred             hhhhHHHHHHHHHHCCC-ceEEEEE
Confidence            44   133444556665 6666554

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=89.46  E-value=2.6  Score=31.57  Aligned_cols=85  Identities=12%  Similarity=0.090  Sum_probs=54.2

Q ss_pred             eEEEEcCChHHHH-HHHHHHH-cCCCeEE-EEcCChhHHHH-HHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          186 TVAIFGLGAVGLA-VAEGARL-NRASKII-GVDINPEKFEI-GKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       186 ~VLI~G~g~~G~~-ai~la~~-~g~~~Vi-~~~~~~~~~~~-~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      +|.|+|.|.+|.- .+...+. -+. +++ +.++++++.+. .++++... ++       ++ +.+.   . .+|+|+-+
T Consensus         3 ri~iIG~G~~g~~~~~~~l~~~~~~-~i~~v~d~~~~~~~~~~~~~~~~~-~~-------~~-~~l~---~-~~D~V~I~   68 (164)
T d1tlta1           3 RIGVVGLGGIAQKAWLPVLAAASDW-TLQGAWSPTRAKALPICESWRIPY-AD-------SL-SSLA---A-SCDAVFVH   68 (164)
T ss_dssp             EEEEECCSTHHHHTHHHHHHSCSSE-EEEEEECSSCTTHHHHHHHHTCCB-CS-------SH-HHHH---T-TCSEEEEC
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCc-EEEEEEechhHhhhhhhhcccccc-cc-------cc-hhhh---h-hccccccc
Confidence            5789999998863 5555554 467 555 44566665544 45676542 21       22 2222   2 68999999


Q ss_pred             CCChHHHHHHHHHhhcCCceEEEEC
Q 017457          262 IGLTSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       262 ~g~~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      +......+.+..++..+  .=+++.
T Consensus        69 tp~~~h~~~~~~al~~g--k~V~~E   91 (164)
T d1tlta1          69 SSTASHFDVVSTLLNAG--VHVCVD   91 (164)
T ss_dssp             SCTTHHHHHHHHHHHTT--CEEEEE
T ss_pred             ccchhcccccccccccc--ceeecc
Confidence            98877788888888874  445554

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.38  E-value=0.2  Score=42.53  Aligned_cols=35  Identities=23%  Similarity=0.265  Sum_probs=30.8

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  217 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~  217 (371)
                      ++..+|+|+|+|.-|+.|+..+...|. +|++.+.+
T Consensus         3 ~~~~kViVIGaG~aGL~aA~~L~~~G~-~V~VlEa~   37 (449)
T d2dw4a2           3 KKTGKVIIIGSGVSGLAAARQLQSFGM-DVTLLEAR   37 (449)
T ss_dssp             SCCCEEEEECCBHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred             CCCCcEEEECCCHHHHHHHHHHHhCCC-CEEEEeCC
Confidence            456679999999999999999999999 99999854

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=89.30  E-value=0.47  Score=39.11  Aligned_cols=98  Identities=10%  Similarity=-0.106  Sum_probs=63.0

Q ss_pred             cCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh-CcceEEcCCCCCCccHHHHHHHhh--CCCc
Q 017457          179 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GITDFINPATCGDKTVSQVIKEMT--DGGA  255 (371)
Q Consensus       179 ~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l-ga~~v~~~~~~~~~~~~~~i~~~~--~gg~  255 (371)
                      ....++.+||=+|+|. |..+..++..... +|++++.+++-++.+++. .....++...   .++    .++.  .+.+
T Consensus        89 l~~~~~~~vLD~GcG~-G~~t~~ll~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~~~---~d~----~~~~~~~~~f  159 (254)
T d1xtpa_          89 LPGHGTSRALDCGAGI-GRITKNLLTKLYA-TTDLLEPVKHMLEEAKRELAGMPVGKFIL---ASM----ETATLPPNTY  159 (254)
T ss_dssp             STTCCCSEEEEETCTT-THHHHHTHHHHCS-EEEEEESCHHHHHHHHHHTTTSSEEEEEE---SCG----GGCCCCSSCE
T ss_pred             CCCCCCCeEEEecccC-ChhhHHHHhhcCc-eEEEEcCCHHHHHhhhccccccccceeEE---ccc----cccccCCCcc
Confidence            3445677899889876 7777788776665 899999999988888763 2111121111   111    1222  2379


Q ss_pred             CEEEECCC-----Ch---HHHHHHHHHhhcCCceEEEEC
Q 017457          256 DYCFECIG-----LT---SVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       256 d~vid~~g-----~~---~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      |+|+..-.     ..   ..++.+.+.|+++ |.++...
T Consensus       160 D~I~~~~vl~hl~d~d~~~~l~~~~~~Lkpg-G~iii~e  197 (254)
T d1xtpa_         160 DLIVIQWTAIYLTDADFVKFFKHCQQALTPN-GYIFFKE  197 (254)
T ss_dssp             EEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             ceEEeeccccccchhhhHHHHHHHHHhcCCC-cEEEEEe
Confidence            99985322     11   2367888899998 9888654

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=89.26  E-value=0.17  Score=41.75  Aligned_cols=33  Identities=24%  Similarity=0.205  Sum_probs=29.3

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE  219 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~  219 (371)
                      .|+|+|+|+.|++++..+...|. +|.++++++.
T Consensus         6 DViIIGaG~aGl~aA~~la~~G~-~V~vlEk~~~   38 (253)
T d2gqfa1           6 ENIIIGAGAAGLFCAAQLAKLGK-SVTVFDNGKK   38 (253)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred             cEEEECcCHHHHHHHHHHHHCCC-cEEEEecCCC
Confidence            48999999999999998888999 8999997764

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.23  E-value=0.48  Score=36.46  Aligned_cols=94  Identities=15%  Similarity=0.247  Sum_probs=62.4

Q ss_pred             hccccchhhhHHHHHHHcC-CCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCC
Q 017457          162 CLLSCGVSTGVGAAWKVAG-VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG  239 (371)
Q Consensus       162 a~~~~~~~ta~~~l~~~~~-~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~  239 (371)
                      +.+||+....+..+ +..+ --.|++|+|+|. ..+|.-.+.++...|+ +|+.+.+...                    
T Consensus        17 ~~~PcTp~aii~lL-~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~ga-tVt~~~~~t~--------------------   74 (170)
T d1a4ia1          17 CFIPCTPKGCLELI-KETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNA-TVTTCHSKTA--------------------   74 (170)
T ss_dssp             CCCCHHHHHHHHHH-HTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTCS--------------------
T ss_pred             CCCCChHHHHHHHH-HHhCcccccceEEEEecCCccchHHHHHHHhccC-ceEEEecccc--------------------
Confidence            34565555555433 3333 347999999997 7899999999999999 8888774322                    


Q ss_pred             CccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECc
Q 017457          240 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       240 ~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                        +..+.++     .+|+++-++|.+..+.  -+.++++ -.++++|.
T Consensus        75 --~l~~~~~-----~aDivi~a~G~~~~i~--~~~vk~g-~iviDvgi  112 (170)
T d1a4ia1          75 --HLDEEVN-----KGDILVVATGQPEMVK--GEWIKPG-AIVIDCGI  112 (170)
T ss_dssp             --SHHHHHT-----TCSEEEECCCCTTCBC--GGGSCTT-CEEEECCC
T ss_pred             --cHHHHHh-----hccchhhccccccccc--cccccCC-CeEeccCc
Confidence              2211111     5788888888766322  3357776 78888875

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=88.96  E-value=0.18  Score=41.18  Aligned_cols=33  Identities=30%  Similarity=0.403  Sum_probs=28.5

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE  219 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~  219 (371)
                      .|+|+|+|+.|++++..+...|. +|+++++++.
T Consensus         4 DViIIGaG~aGl~aA~~la~~G~-~V~liEk~~~   36 (251)
T d2i0za1           4 DVIVIGGGPSGLMAAIGAAEEGA-NVLLLDKGNK   36 (251)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCCC
Confidence            38999999999998888888899 9999987653

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=88.88  E-value=0.19  Score=38.93  Aligned_cols=30  Identities=23%  Similarity=0.123  Sum_probs=27.0

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcC
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDI  216 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~  216 (371)
                      .|+|+|+|+.|+.|+..|...|. +|.++++
T Consensus         3 DViIIGgGpaGl~AAi~aar~G~-~v~iie~   32 (184)
T d1fl2a1           3 DVLIVGSGPAGAAAAIYSARKGI-RTGLMGE   32 (184)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTTC-CEEEECS
T ss_pred             cEEEECcCHHHHHHHHHHHHcCC-eEEEEEE
Confidence            48899999999999999999999 7888874

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=88.82  E-value=1.2  Score=34.19  Aligned_cols=43  Identities=23%  Similarity=0.166  Sum_probs=36.9

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCc
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI  229 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga  229 (371)
                      +|-|+|.|.+|...+.-+...|+ +|++.++++++.+.+.+.+.
T Consensus         3 kIGvIGlG~MG~~ma~~L~~~G~-~V~~~dr~~~~~~~l~~~~~   45 (178)
T d1pgja2           3 DVGVVGLGVMGANLALNIAEKGF-KVAVFNRTYSKSEEFMKANA   45 (178)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTT
T ss_pred             EEEEEeehHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCC
Confidence            47789999999988888878899 89999999999998876553

>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=88.79  E-value=1.1  Score=37.37  Aligned_cols=98  Identities=13%  Similarity=0.241  Sum_probs=58.7

Q ss_pred             cCCCCCCeEEEEcC--ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HHhCcceE-EcCCCCCCccHHHHHHHhh
Q 017457          179 AGVEVGSTVAIFGL--GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITDF-INPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       179 ~~~~~g~~VLI~G~--g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~~v-~~~~~~~~~~~~~~i~~~~  251 (371)
                      ...++|++||=.-|  |+-....   |..+.-.+|++.+.++.|.+.+    +.+|...+ +....   ....   ....
T Consensus        98 L~~~~g~~vLD~CAaPGgKt~~l---a~l~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~---~~~~---~~~~  168 (284)
T d1sqga2          98 LAPQNGEHILDLCAAPGGKTTHI---LEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG---RYPS---QWCG  168 (284)
T ss_dssp             HCCCTTCEEEEESCTTCHHHHHH---HHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCT---TCTH---HHHT
T ss_pred             cCccccceeEeccCccccchhhh---hhhhhhhhhhhhhcchhhhhhHhhhhhcccccceeeeccc---cccc---hhcc
Confidence            46789999998844  5544433   3333323899999999987766    44776533 22222   2221   1122


Q ss_pred             CCCcCEEE-E--CCCChH-------------------------HHHHHHHHhhcCCceEEEEC
Q 017457          252 DGGADYCF-E--CIGLTS-------------------------VMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       252 ~gg~d~vi-d--~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g  286 (371)
                      .+.||.|+ |  |+|...                         .+..+++.++++ |++|...
T Consensus       169 ~~~fd~IL~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~g-G~lvYsT  230 (284)
T d1sqga2         169 EQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTG-GTLVYAT  230 (284)
T ss_dssp             TCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEE-EEEEEEE
T ss_pred             cccccEEEEeccccccCccccccchhhccccchhhHHHHHHHHHHHHHHHhcCCC-ceEEEee
Confidence            33799887 6  666421                         356666678886 8776554

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=88.77  E-value=0.74  Score=33.53  Aligned_cols=69  Identities=13%  Similarity=0.244  Sum_probs=44.0

Q ss_pred             eEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCC
Q 017457          186 TVAIFGL-GAVGLAVAEGARLNRASKIIGV-DINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG  263 (371)
Q Consensus       186 ~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~-~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g  263 (371)
                      +|.|+|+ |-+|++..++++..+. .++.. +.+..                     ..+         ..+|+++|.+.
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~-~l~~~id~~~~---------------------~~~---------~~~DVvIDFS~   50 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGH-ELVLKVDVNGV---------------------EEL---------DSPDVVIDFSS   50 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEEETTEE---------------------EEC---------SCCSEEEECSC
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCC-eEEEEECCCcH---------------------HHh---------ccCCEEEEecC
Confidence            5889997 9999999999998888 55443 21100                     010         15788888877


Q ss_pred             ChHHHHHHHHHhhcCCceEEEECc
Q 017457          264 LTSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       264 ~~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      -.. ....++..... +.=+.+|.
T Consensus        51 p~~-~~~~l~~~~~~-~~p~ViGT   72 (128)
T d1vm6a3          51 PEA-LPKTVDLCKKY-RAGLVLGT   72 (128)
T ss_dssp             GGG-HHHHHHHHHHH-TCEEEECC
T ss_pred             HHH-HHHHHHHHHhc-CCCEEEEc
Confidence            666 44444444443 55556665

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=88.61  E-value=0.34  Score=36.66  Aligned_cols=35  Identities=20%  Similarity=0.235  Sum_probs=30.1

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  217 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~  217 (371)
                      -+++|+|+|+|.+|.=++..+..+|++.|+++.+.
T Consensus        44 ~~~kVvVIGGGdtA~D~A~~a~r~GA~~V~vi~rr   78 (153)
T d1gtea3          44 IRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRK   78 (153)
T ss_dssp             CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred             CCCEEEEECCChhHHHHHHHHHHcCCcceeEEEeC
Confidence            46789999999999999999999999778888654

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=88.56  E-value=0.28  Score=40.57  Aligned_cols=34  Identities=32%  Similarity=0.372  Sum_probs=30.3

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEc
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVD  215 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~  215 (371)
                      --+|++|+|.|.|.+|..+++++..+|+ +|+++.
T Consensus        33 ~l~g~~v~IQGfGnVG~~~a~~L~e~Ga-kvvavs   66 (255)
T d1bgva1          33 TLVGKTVALAGFGNVAWGAAKKLAELGA-KAVTLS   66 (255)
T ss_dssp             CSTTCEEEECCSSHHHHHHHHHHHHHTC-EEEEEE
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEe
Confidence            3578999999999999999999999999 787764

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.53  E-value=0.084  Score=42.78  Aligned_cols=97  Identities=15%  Similarity=0.066  Sum_probs=62.6

Q ss_pred             CCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh----Ccc--eEEcCCCCCCccHHHHHHHhhCC
Q 017457          180 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GIT--DFINPATCGDKTVSQVIKEMTDG  253 (371)
Q Consensus       180 ~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l----ga~--~v~~~~~~~~~~~~~~i~~~~~g  253 (371)
                      ...++.+||=+|+|. |..+..+++..+. +|++++.+++-.+.+++.    +..  .++..+-   .++     ....+
T Consensus        57 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~d~---~~~-----~~~~~  126 (222)
T d2ex4a1          57 NKTGTSCALDCGAGI-GRITKRLLLPLFR-EVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGL---QDF-----TPEPD  126 (222)
T ss_dssp             -CCCCSEEEEETCTT-THHHHHTTTTTCS-EEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCG---GGC-----CCCSS
T ss_pred             CCCCCCEEEEeccCC-CHhhHHHHHhcCC-EEEEeecCHHHhhccccccccccccccccccccc---ccc-----ccccc
Confidence            456778999999876 7777777666565 899999999988887653    221  2222111   111     11123


Q ss_pred             CcCEEEEC-----CCCh---HHHHHHHHHhhcCCceEEEECc
Q 017457          254 GADYCFEC-----IGLT---SVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       254 g~d~vid~-----~g~~---~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      .+|+|+..     ...+   ..++.+.+.|+++ |.++....
T Consensus       127 ~fD~I~~~~~l~h~~~~~~~~~l~~i~~~Lk~~-G~~~i~~~  167 (222)
T d2ex4a1         127 SYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPN-GIIVIKDN  167 (222)
T ss_dssp             CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             cccccccccccccchhhhhhhHHHHHHHhcCCc-ceEEEEEc
Confidence            78999853     2222   2478888999998 98887643

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=88.52  E-value=1.2  Score=34.46  Aligned_cols=95  Identities=20%  Similarity=0.228  Sum_probs=55.1

Q ss_pred             eEEEEcCChHHHHHHHHHHHc-CCCeEEEEc-CChh-HHHHHHHhCcceEEcCCC--------C-CCccHHHHHHHhhCC
Q 017457          186 TVAIFGLGAVGLAVAEGARLN-RASKIIGVD-INPE-KFEIGKKFGITDFINPAT--------C-GDKTVSQVIKEMTDG  253 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~-g~~~Vi~~~-~~~~-~~~~~~~lga~~v~~~~~--------~-~~~~~~~~i~~~~~g  253 (371)
                      +|.|.|-|-+|...++.+... .. .++++. ..+. ....+...+.......+.        . -...+.+..     .
T Consensus         3 KVaINGfGRIGR~v~Ral~~~~di-evVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~-----~   76 (178)
T d1b7go1           3 NVAVNGYGTIGKRVADAIIKQPDM-KLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLI-----K   76 (178)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTE-EEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHH-----H
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCC-EEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhh-----h
Confidence            588999999999999888765 45 666653 3332 333333333221111100        0 001111111     1


Q ss_pred             CcCEEEECCCChHHHHHHHHHhhcCCceEEEECc
Q 017457          254 GADYCFECIGLTSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       254 g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      ++|+|+||+|.-...+.+-.+++.+ -+++..+.
T Consensus        77 ~vDiViecTG~f~~~e~a~~hl~~G-~KvIi~~~  109 (178)
T d1b7go1          77 TSDIVVDTTPNGVGAQYKPIYLQLQ-RNAIFQGG  109 (178)
T ss_dssp             HCSEEEECCSTTHHHHHHHHHHHTT-CEEEECTT
T ss_pred             cCCEEEECCCCcCCHHHHHHHHHcC-CEEEEECC
Confidence            5899999999877677777888775 56666543

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=88.39  E-value=1.3  Score=37.75  Aligned_cols=98  Identities=15%  Similarity=0.134  Sum_probs=62.5

Q ss_pred             cCCCCCCeEEEEcC--ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCc--c--eEEcCCCCCCccHHHHHH
Q 017457          179 AGVEVGSTVAIFGL--GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI--T--DFINPATCGDKTVSQVIK  248 (371)
Q Consensus       179 ~~~~~g~~VLI~G~--g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga--~--~v~~~~~~~~~~~~~~i~  248 (371)
                      ..+.+|++||=..+  |+.++.    |...|++.|+.++.++...+.+++    .|.  +  .++.      .+.-+.++
T Consensus       140 ~~~~~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~------~d~~~~l~  209 (317)
T d2b78a2         140 NGSAAGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVV------MDVFDYFK  209 (317)
T ss_dssp             HTTTBTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEE------SCHHHHHH
T ss_pred             HHhhCCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEE------ccHHHHHH
Confidence            45788999998854  555543    234688789999999988888764    232  1  2332      23444444


Q ss_pred             Hhh-CC-CcCEEE-ECCCC--------------hHHHHHHHHHhhcCCceEEEECc
Q 017457          249 EMT-DG-GADYCF-ECIGL--------------TSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       249 ~~~-~g-g~d~vi-d~~g~--------------~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      .+. .+ .||+|| |.-.-              ...+..+++.++++ |.++.+..
T Consensus       210 ~~~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pg-G~l~~~sc  264 (317)
T d2b78a2         210 YARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSEN-GLIIASTN  264 (317)
T ss_dssp             HHHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEE-EEEEEEEC
T ss_pred             HHHhhcCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEeC
Confidence            432 23 799998 53210              11356778889998 98887754

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=88.39  E-value=0.31  Score=35.19  Aligned_cols=37  Identities=19%  Similarity=0.222  Sum_probs=32.0

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      ++.+++++|+|+|.+|+=++..+..+|. +|+++.+++
T Consensus        29 ~~~~~~vvIiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~   65 (122)
T d1xhca2          29 IENSGEAIIIGGGFIGLELAGNLAEAGY-HVKLIHRGA   65 (122)
T ss_dssp             HHHHSEEEEEECSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             hhcCCcEEEECCcHHHHHHHHHhhcccc-eEEEEeccc
Confidence            3456899999999999999999999999 999998654

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=88.31  E-value=0.11  Score=43.13  Aligned_cols=98  Identities=16%  Similarity=0.097  Sum_probs=60.5

Q ss_pred             HHHcCCCCCCeEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHH----HHhCc-c--eEEcCCCCCCccHHHHH
Q 017457          176 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPEKFEIG----KKFGI-T--DFINPATCGDKTVSQVI  247 (371)
Q Consensus       176 ~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~-g~~~Vi~~~~~~~~~~~~----~~lga-~--~v~~~~~~~~~~~~~~i  247 (371)
                      .....+.+.++||=+|+|. |..+..+++.. +. ++++++. ++..+.+    .+.|. +  ..+..      ++    
T Consensus        73 ~~~~d~~~~~~VLDvGcG~-G~~~~~la~~~p~~-~~~~~D~-~~~~~~a~~~~~~~~~~~rv~~~~~------D~----  139 (253)
T d1tw3a2          73 AAAYDWTNVRHVLDVGGGK-GGFAAAIARRAPHV-SATVLEM-AGTVDTARSYLKDEGLSDRVDVVEG------DF----  139 (253)
T ss_dssp             HHHSCCTTCSEEEEETCTT-SHHHHHHHHHCTTC-EEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEEC------CT----
T ss_pred             HhhcCCccCCEEEEeCCCC-CHHHHHHHHhccee-EEEEccC-HHHHHHHHHHHHHhhcccchhhccc------cc----
Confidence            3445677888999998875 77888888876 45 8888885 4433333    33332 1  12211      11    


Q ss_pred             HHhhCCCcCEEEECC-----CCh---HHHHHHHHHhhcCCceEEEECc
Q 017457          248 KEMTDGGADYCFECI-----GLT---SVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       248 ~~~~~gg~d~vid~~-----g~~---~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      .+..+.++|+|+-..     +.+   ..++.+.+.|+|+ |+++....
T Consensus       140 ~~~~~~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPG-G~l~i~e~  186 (253)
T d1tw3a2         140 FEPLPRKADAIILSFVLLNWPDHDAVRILTRCAEALEPG-GRILIHER  186 (253)
T ss_dssp             TSCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEE-EEEEEEEC
T ss_pred             hhhcccchhheeeccccccCCchhhHHHHHHHHHhcCCC-cEEEEEec
Confidence            011123789988322     122   2367889999998 99887753

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=88.18  E-value=1.2  Score=32.11  Aligned_cols=88  Identities=18%  Similarity=0.288  Sum_probs=53.6

Q ss_pred             CCCCeEEEEcCChH--H------HHHHHHH---HHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHh
Q 017457          182 EVGSTVAIFGLGAV--G------LAVAEGA---RLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEM  250 (371)
Q Consensus       182 ~~g~~VLI~G~g~~--G------~~ai~la---~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~  250 (371)
                      ..-++|||+|+|+.  |      .+.+|.+   |..|+ +++.+..+++....-..+ +|+++- +    +-..+.+.+.
T Consensus         5 ~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~-~~iliN~NP~TVstd~d~-aD~lYf-e----Plt~e~v~~I   77 (127)
T d1a9xa3           5 TDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGY-RVINVNSNPATIMTDPEM-ADATYI-E----PIHWEVVRKI   77 (127)
T ss_dssp             SSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTC-EEEEECSCTTCGGGCGGG-SSEEEC-S----CCCHHHHHHH
T ss_pred             CCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCC-eEEEecCchHhhhcChhh-cceeee-e----cCCHHHHHHH
Confidence            34579999998642  2      4444444   55799 899999998765432222 344431 1    2223334443


Q ss_pred             hCC-CcCEEEECCCChHHHHHHHHHhh
Q 017457          251 TDG-GADYCFECIGLTSVMNDAFNSSR  276 (371)
Q Consensus       251 ~~g-g~d~vid~~g~~~~~~~~~~~l~  276 (371)
                      ... +.|.++-..|+...++.+.+...
T Consensus        78 i~~E~pd~il~~~GGQtalnla~~L~~  104 (127)
T d1a9xa3          78 IEKERPDAVLPTMGGQTALNCALELER  104 (127)
T ss_dssp             HHHHCCSEEECSSSHHHHHHHHHHHHH
T ss_pred             HHHhCcCCeEEEeeeehHhHHHHHHHH
Confidence            333 78999988888776666666543

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.12  E-value=1.1  Score=38.15  Aligned_cols=30  Identities=17%  Similarity=0.075  Sum_probs=27.2

Q ss_pred             CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc
Q 017457          185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVD  215 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~  215 (371)
                      ++|||+|+ |-+|...+..+...|. +|++++
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~-~V~~ld   33 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGY-LPVVID   33 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTC-CEEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcC-EEEEEE
Confidence            68999998 9999999999988998 899885

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=87.99  E-value=0.19  Score=41.38  Aligned_cols=95  Identities=15%  Similarity=0.135  Sum_probs=58.6

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eE--EcCCCCCCccHHHHHHHhhCC
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DF--INPATCGDKTVSQVIKEMTDG  253 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v--~~~~~~~~~~~~~~i~~~~~g  253 (371)
                      .+++++||=+|+|. |..+..+++. |..+|++++.+++.++.+++    .+.. .+  ...+- ....+      ..++
T Consensus        22 ~~~~~~VLDlGCG~-G~~~~~~~~~-~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~-~~~~~------~~~~   92 (252)
T d1ri5a_          22 TKRGDSVLDLGCGK-GGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDS-YGRHM------DLGK   92 (252)
T ss_dssp             CCTTCEEEEETCTT-TTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCT-TTSCC------CCSS
T ss_pred             CCCcCEEEEecccC-cHHHHHHHHc-CCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcch-hhhcc------cccc
Confidence            57899999999865 5556667665 44489999999998888764    2321 11  11111 00000      0123


Q ss_pred             CcCEEEECCCCh----------HHHHHHHHHhhcCCceEEEE
Q 017457          254 GADYCFECIGLT----------SVMNDAFNSSREGWGKTVIL  285 (371)
Q Consensus       254 g~d~vid~~g~~----------~~~~~~~~~l~~~~G~~v~~  285 (371)
                      .+|+|+....-.          ..++.+.+.|+++ |.++..
T Consensus        93 ~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~g-G~~i~~  133 (252)
T d1ri5a_          93 EFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPG-GYFIMT  133 (252)
T ss_dssp             CEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEE-EEEEEE
T ss_pred             cceEEEEcceeeecCCCHHHHHHHHHHHhceeCCC-CEEEEE
Confidence            799998543321          2356677889998 988754

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=87.96  E-value=0.55  Score=36.42  Aligned_cols=85  Identities=12%  Similarity=0.039  Sum_probs=50.0

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh--HHHHHHHhCcceE----EcCCC-CCCccHHHHHHHhhCCCcCEE
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE--KFEIGKKFGITDF----INPAT-CGDKTVSQVIKEMTDGGADYC  258 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~--~~~~~~~lga~~v----~~~~~-~~~~~~~~~i~~~~~gg~d~v  258 (371)
                      +|.|+|+|..|.+.+..+...|. .|+...+..+  ..+.+.+......    +.... ....+..+.+     ...|++
T Consensus         2 kI~ViGaG~~GtalA~~la~~g~-~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~ad~I   75 (180)
T d1txga2           2 IVSILGAGAMGSALSVPLVDNGN-EVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCL-----ENAEVV   75 (180)
T ss_dssp             EEEEESCCHHHHHHHHHHHHHCC-EEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHH-----TTCSEE
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-EEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHH-----hccchh
Confidence            58899999999998888777787 8988876433  3333322111000    00000 0002222222     168999


Q ss_pred             EECCCChHHHHHHHHHhhc
Q 017457          259 FECIGLTSVMNDAFNSSRE  277 (371)
Q Consensus       259 id~~g~~~~~~~~~~~l~~  277 (371)
                      +-++.... +...++.+.+
T Consensus        76 i~avps~~-~~~~~~~l~~   93 (180)
T d1txga2          76 LLGVSTDG-VLPVMSRILP   93 (180)
T ss_dssp             EECSCGGG-HHHHHHHHTT
T ss_pred             hcccchhh-hHHHHHhhcc
Confidence            99999876 6666666555

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.86  E-value=0.24  Score=39.72  Aligned_cols=32  Identities=16%  Similarity=0.293  Sum_probs=28.2

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      .|+|+|+|..|+.++..+...|. +|.++++++
T Consensus         7 DviViGaG~~Gl~~A~~La~~G~-~V~vlE~~~   38 (297)
T d2bcgg1           7 DVIVLGTGITECILSGLLSVDGK-KVLHIDKQD   38 (297)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-CEEEEcCCC
Confidence            48999999999998888888898 899999764

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.80  E-value=0.44  Score=42.57  Aligned_cols=33  Identities=21%  Similarity=0.374  Sum_probs=29.6

Q ss_pred             CCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcC
Q 017457          184 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI  216 (371)
Q Consensus       184 g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~  216 (371)
                      +.+|||+|+|++|.-++..+-+.|..++.+++.
T Consensus        37 ~~kVlvvG~GglG~ei~k~L~~~Gvg~i~lvD~   69 (426)
T d1yovb1          37 TCKVLVIGAGGLGCELLKNLALSGFRQIHVIDM   69 (426)
T ss_dssp             HCCEEEECSSTTHHHHHHHHHTTTCCCEEEECC
T ss_pred             cCeEEEECCCHHHHHHHHHHHHcCCCeEEEEEC
Confidence            367999999999999999998999999999985

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.74  E-value=0.44  Score=37.74  Aligned_cols=69  Identities=17%  Similarity=0.283  Sum_probs=41.9

Q ss_pred             CCeEEEEcC-ChHHHHHHHHHHHcCCC-eEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          184 GSTVAIFGL-GAVGLAVAEGARLNRAS-KIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       184 g~~VLI~G~-g~~G~~ai~la~~~g~~-~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      .++|||+|+ |.+|...+..+...|.. +|++..+++..       ....+ ....   .++.+.. .......|.|++|
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~-------~~~~~-~~~~---~d~~~~~-~~~~~~~d~vi~~   69 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-------EHPRL-DNPV---GPLAELL-PQLDGSIDTAFCC   69 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-------CCTTE-ECCB---SCHHHHG-GGCCSCCSEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh-------hcccc-cccc---cchhhhh-hccccchheeeee
Confidence            379999998 99999999988888852 56555543211       00111 1111   2343322 2223378999999


Q ss_pred             CCC
Q 017457          262 IGL  264 (371)
Q Consensus       262 ~g~  264 (371)
                      .|.
T Consensus        70 ~g~   72 (212)
T d2a35a1          70 LGT   72 (212)
T ss_dssp             CCC
T ss_pred             eee
Confidence            875

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=87.73  E-value=2.7  Score=32.02  Aligned_cols=98  Identities=23%  Similarity=0.281  Sum_probs=58.6

Q ss_pred             eEEEEcCChHHHHHHHHHHHcC-CCeEEEEc-CC-hhHHHHHHHhCcceEEcCCCCCCccHHH-------HHHHhhCCCc
Q 017457          186 TVAIFGLGAVGLAVAEGARLNR-ASKIIGVD-IN-PEKFEIGKKFGITDFINPATCGDKTVSQ-------VIKEMTDGGA  255 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g-~~~Vi~~~-~~-~~~~~~~~~lga~~v~~~~~~~~~~~~~-------~i~~~~~gg~  255 (371)
                      +|.|.|-|-+|...++.+...+ . .++++- .+ ......+...+.+......+. ...+.+       ...++. .++
T Consensus         3 ~VgINGfGRIGR~v~R~l~~~~di-~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~v~g~~~~~~-~~v   79 (171)
T d1cf2o1           3 AVAINGYGTVGKRVADAIAQQDDM-KVIGVSKTRPDFEARMALKKGYDLYVAIPER-VKLFEKAGIEVAGTVDDML-DEA   79 (171)
T ss_dssp             EEEEECCSHHHHHHHHHHHTSSSE-EEEEEEESSCSHHHHHHHHTTCCEEESSGGG-HHHHHHTTCCCCEEHHHHH-HTC
T ss_pred             EEEEEcCcHHHHHHHHHHHhCCCc-eEEEEecCCcHHHHHHHHhcCCceEeccccc-ceeecccCcccCCChhHhh-cCC
Confidence            6889999999999988776554 4 555543 22 233445555555433221110 000000       011111 169


Q ss_pred             CEEEECCCChHHHHHHHHHhhcCCceEEEECc
Q 017457          256 DYCFECIGLTSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       256 d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      |+|+||+|.-...+.+-..+..+ -+.+..+.
T Consensus        80 DvViEcTG~f~~~~~~~~hl~~G-~K~vi~~~  110 (171)
T d1cf2o1          80 DIVIDCTPEGIGAKNLKMYKEKG-IKAIFQGG  110 (171)
T ss_dssp             SEEEECCSTTHHHHHHHHHHHTT-CEEEECTT
T ss_pred             CEEEEccCCCCCHHHHHHHHHcC-CCEEEECC
Confidence            99999999877677888889886 77776654

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=87.70  E-value=0.22  Score=39.77  Aligned_cols=31  Identities=26%  Similarity=0.191  Sum_probs=27.7

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  217 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~  217 (371)
                      -|+|+|+|+.|+.++..+..+|. +|++++..
T Consensus         5 DvvVIGgGpaGl~aA~~aa~~G~-kV~vie~~   35 (221)
T d1dxla1           5 DVVIIGGGPGGYVAAIKAAQLGF-KTTCIEKR   35 (221)
T ss_dssp             CEEEECCSHHHHHHHHHHHHHTC-CEEEEECS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-cEEEEEec
Confidence            48899999999999999999999 89998754

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=87.59  E-value=0.5  Score=35.73  Aligned_cols=41  Identities=20%  Similarity=0.226  Sum_probs=33.3

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHH
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKF  221 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~  221 (371)
                      .++..+|.|+|+|.+|...+.++...+...++.++.++++.
T Consensus         4 ~~k~~KI~IIGaG~VG~~lA~~l~~~~~~el~L~D~~~~~~   44 (154)
T d1pzga1           4 VQRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMP   44 (154)
T ss_dssp             CSCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHH
T ss_pred             ccCCCcEEEECCCHHHHHHHHHHHhCCCceEEEEEeccccc
Confidence            45668899999999998888887877876899998877653

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=87.47  E-value=0.82  Score=33.21  Aligned_cols=63  Identities=19%  Similarity=0.176  Sum_probs=48.8

Q ss_pred             HHHHcCCCCCCeEEEE-cCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCC
Q 017457          175 AWKVAGVEVGSTVAIF-GLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPAT  237 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~-G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~  237 (371)
                      .+..+++..-+.+++. ..-..-.++.++++.+|..++++...+++..+.++++|++.++++..
T Consensus        57 ~l~~~~i~~a~~vv~~t~~d~~N~~~~~~~k~~~~~~iI~~~~~~~~~~~l~~~G~d~vi~p~~  120 (132)
T d1lssa_          57 TLEDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFERLGVDVVVSPEL  120 (132)
T ss_dssp             HHHHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEECSSTTHHHHHHHTTCSEEECHHH
T ss_pred             hhhhcChhhhhhhcccCCcHHHHHHHHHHHHHcCCceEEEEecCHHHHHHHHHCCCCEEECHHH
Confidence            4556777776666554 33456678888999999988999998888999999999999987543

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=87.41  E-value=0.2  Score=41.61  Aligned_cols=31  Identities=32%  Similarity=0.405  Sum_probs=28.1

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  217 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~  217 (371)
                      +|+|+|+|..|+.++..+...|. +|++++.+
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~-~V~vlE~~   32 (347)
T d2ivda1           2 NVAVVGGGISGLAVAHHLRSRGT-DAVLLESS   32 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHTTTC-CEEEECSS
T ss_pred             eEEEECCCHHHHHHHHHHHhCCC-CEEEEecC
Confidence            58999999999999999998999 89999865

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=87.34  E-value=1.4  Score=35.27  Aligned_cols=90  Identities=21%  Similarity=0.281  Sum_probs=57.2

Q ss_pred             eEEEEcCChHHHH-HHHHHH-HcCCCeEE-EEcCChhHHHH-HHHhCcc--eEEcCCCCCCccHHHHHHHhhCC-CcCEE
Q 017457          186 TVAIFGLGAVGLA-VAEGAR-LNRASKII-GVDINPEKFEI-GKKFGIT--DFINPATCGDKTVSQVIKEMTDG-GADYC  258 (371)
Q Consensus       186 ~VLI~G~g~~G~~-ai~la~-~~g~~~Vi-~~~~~~~~~~~-~~~lga~--~v~~~~~~~~~~~~~~i~~~~~g-g~d~v  258 (371)
                      +|.|+|+|.+|.- .+...+ .-+. +++ ++++++++.+. ++++|.+  .+..+.+     +    .++... .+|+|
T Consensus        35 riaiIG~G~~~~~~~~~~~~~~~~~-~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d-----~----~ell~~~~iD~V  104 (221)
T d1h6da1          35 GYAIVGLGKYALNQILPGFAGCQHS-RIEALVSGNAEKAKIVAAEYGVDPRKIYDYSN-----F----DKIAKDPKIDAV  104 (221)
T ss_dssp             EEEEECCSHHHHHTHHHHTTTCSSE-EEEEEECSCHHHHHHHHHHTTCCGGGEECSSS-----G----GGGGGCTTCCEE
T ss_pred             EEEEEcCcHHHHHHHHHHHHhCCCc-eEEEEecCCHHHHHHHHHhhccccccccccCc-----h----hhhcccccceee
Confidence            7788999999863 333333 3367 555 55777777655 4556643  2322222     2    222223 79999


Q ss_pred             EECCCChHHHHHHHHHhhcCCceEEEECc
Q 017457          259 FECIGLTSVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       259 id~~g~~~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      +-++......+.+.+++..  |.=+++.-
T Consensus       105 ~I~tp~~~H~~~~~~al~~--gk~v~~EK  131 (221)
T d1h6da1         105 YIILPNSLHAEFAIRAFKA--GKHVMCEK  131 (221)
T ss_dssp             EECSCGGGHHHHHHHHHHT--TCEEEECS
T ss_pred             eeccchhhhhhHHHHhhhc--chhhhcCC
Confidence            9998887778889999987  56566653

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=87.10  E-value=2.9  Score=35.09  Aligned_cols=100  Identities=15%  Similarity=0.138  Sum_probs=63.2

Q ss_pred             HHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcC--ChhHHHHHHHhCcceEEcCCC-----------------
Q 017457          177 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI--NPEKFEIGKKFGITDFINPAT-----------------  237 (371)
Q Consensus       177 ~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~--~~~~~~~~~~lga~~v~~~~~-----------------  237 (371)
                      +...+.++++|+...+|.-|.+++..|+..|.+-++++..  +..+.+.++.+|++.+.....                 
T Consensus        54 ~~g~~~~~~~vv~~SsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~vv~~~~~~~~~~~~~~~~~~~~~~  133 (310)
T d1y7la1          54 KDGTLTKGKEIVDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKGMKGAIAKAEEIVASD  133 (310)
T ss_dssp             HTTSSCTTCEEEESCCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHC
T ss_pred             HcCCCCCCceeeeecCCCchHHHHHHHHHhhccccccchhhhhhhhhhhHHHhCCceEeccCccccchhhHHHHHHHHhh
Confidence            3445677777666677999999999999999955555543  345777788888875542111                 


Q ss_pred             ---------CCCcc--------HHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhh
Q 017457          238 ---------CGDKT--------VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSR  276 (371)
Q Consensus       238 ---------~~~~~--------~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~  276 (371)
                               +++..        ...++.+..++.+|.++-++|+.-.+.-+.+.++
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~a~Ei~~~~~~~~d~vv~~~G~Gg~~~G~~~~lk  189 (310)
T d1y7la1         134 PSRYVMLKQFENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIK  189 (310)
T ss_dssp             TTTEECCCTTTCTHHHHHHHHTHHHHHHHHTTTCEEEEEEECSSSHHHHHHHHHHH
T ss_pred             cCccccCCCCcchhhHHHhhhhHHHHHHHhcCCCCCEEEecCcCCcchhHHHHHHH
Confidence                     00111        1223333344468988888887665666666554

>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Histamine methyltransferase
domain: Histamine methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.93  E-value=0.47  Score=39.48  Aligned_cols=100  Identities=13%  Similarity=-0.034  Sum_probs=56.6

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHHHHc-------CCCeEEEEcCChhHHHHHHHh-C----c-ceEEcCCCCCCccHHH--
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGARLN-------RASKIIGVDINPEKFEIGKKF-G----I-TDFINPATCGDKTVSQ--  245 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la~~~-------g~~~Vi~~~~~~~~~~~~~~l-g----a-~~v~~~~~~~~~~~~~--  245 (371)
                      .+++-+||=+|+|. |..+..+++.+       +. ++++++.++..++.+++. .    . ...++...   ..+.+  
T Consensus        38 ~~~~~~VLDiGcG~-G~~~~~ll~~l~~~~~~~~~-~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~---~~~~~~~  112 (280)
T d1jqea_          38 TKSEIKILSIGGGA-GEIDLQILSKVQAQYPGVCI-NNEVVEPSAEQIAKYKELVAKISNLENVKFAWHK---ETSSEYQ  112 (280)
T ss_dssp             TCSEEEEEEETCTT-SHHHHHHHHHHHHHSTTCEE-EEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEEC---SCHHHHH
T ss_pred             CCCCCeEEEEcCCC-CHHHHHHHHHhhhhccCCce-EEEEEeCcHHHHHHHHHHHhhccccccccccchh---hhhhhhc
Confidence            34444789888754 44444444331       33 678999999888777652 1    1 11122222   22221  


Q ss_pred             -HHHHh-hCCCcCEEEECCC-----C-hHHHHHHHHHhhcCCceEEEEC
Q 017457          246 -VIKEM-TDGGADYCFECIG-----L-TSVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       246 -~i~~~-~~gg~d~vid~~g-----~-~~~~~~~~~~l~~~~G~~v~~g  286 (371)
                       ..... ..+.||+|+..-.     + ...++.+.+.|+++ |.++...
T Consensus       113 ~~~~~~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~Lkpg-G~l~i~~  160 (280)
T d1jqea_         113 SRMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTN-AKMLIIV  160 (280)
T ss_dssp             HHHTTSSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             chhcccCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCC-CEEEEEE
Confidence             11111 1238999985322     2 23588999999998 9877664

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=86.77  E-value=0.53  Score=37.22  Aligned_cols=40  Identities=33%  Similarity=0.577  Sum_probs=34.5

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK  226 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~  226 (371)
                      +|.|+|.|-+|+..+......|. +|++.+.++++.+.+.+
T Consensus         2 kI~ViGlG~vGl~~a~~la~~g~-~V~g~D~n~~~i~~ln~   41 (202)
T d1mv8a2           2 RISIFGLGYVGAVCAGCLSARGH-EVIGVDVSSTKIDLINQ   41 (202)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHT
T ss_pred             EEEEECCCHhHHHHHHHHHhCCC-cEEEEeCCHHHHHHhcc
Confidence            47889999999987777777899 99999999998887764

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=86.72  E-value=0.27  Score=42.85  Aligned_cols=31  Identities=26%  Similarity=0.365  Sum_probs=25.7

Q ss_pred             eEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC
Q 017457          186 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDI  216 (371)
Q Consensus       186 ~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~  216 (371)
                      +|||+|+ |.+|...+..+...|...|++++.
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~   33 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDK   33 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeC
Confidence            6999998 999999999888889855666653

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=86.50  E-value=0.68  Score=36.54  Aligned_cols=73  Identities=23%  Similarity=0.329  Sum_probs=47.0

Q ss_pred             HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCc-ceEEcCCCCCCccHHHHHHHhhCC
Q 017457          175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI-TDFINPATCGDKTVSQVIKEMTDG  253 (371)
Q Consensus       175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga-~~v~~~~~~~~~~~~~~i~~~~~g  253 (371)
                      +....++ .|++||=.|+|. |.+++. |..+|+++|++++.+++..+.+++.-. ..++..      ++    .+ .++
T Consensus        41 ~~~~~dl-~Gk~VLDlGcGt-G~l~i~-a~~~ga~~V~~vDid~~a~~~ar~N~~~~~~~~~------D~----~~-l~~  106 (197)
T d1ne2a_          41 IYNDGNI-GGRSVIDAGTGN-GILACG-SYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVA------DV----SE-ISG  106 (197)
T ss_dssp             HHHHTSS-BTSEEEEETCTT-CHHHHH-HHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEEC------CG----GG-CCC
T ss_pred             HHHcCCC-CCCEEEEeCCCC-cHHHHH-HHHcCCCcccccccCHHHHHHHHHccccccEEEE------eh----hh-cCC
Confidence            3344444 699999998864 555543 445677689999999999888877432 233332      21    11 234


Q ss_pred             CcCEEEEC
Q 017457          254 GADYCFEC  261 (371)
Q Consensus       254 g~d~vid~  261 (371)
                      .||+|+..
T Consensus       107 ~fD~Vi~N  114 (197)
T d1ne2a_         107 KYDTWIMN  114 (197)
T ss_dssp             CEEEEEEC
T ss_pred             cceEEEeC
Confidence            89999954

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=86.47  E-value=0.28  Score=39.08  Aligned_cols=31  Identities=19%  Similarity=0.212  Sum_probs=27.7

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  217 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~  217 (371)
                      -|+|+|+|+.|+.++..|..+|. +|.+++..
T Consensus         4 DvvVIG~G~aG~~aA~~a~~~G~-kV~iiE~~   34 (217)
T d1gesa1           4 DYIAIGGGSGGIASINRAAMYGQ-KCALIEAK   34 (217)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTTC-CEEEEESS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence            37899999999999999999999 89998764

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=85.86  E-value=1.4  Score=37.52  Aligned_cols=101  Identities=14%  Similarity=0.134  Sum_probs=65.7

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHH-HcCCCeEEEEcCChhHHHHHH----HhCcceEEcCCCCCCccHHHHHHHhhCCCcC
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGAR-LNRASKIIGVDINPEKFEIGK----KFGITDFINPATCGDKTVSQVIKEMTDGGAD  256 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~-~~g~~~Vi~~~~~~~~~~~~~----~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d  256 (371)
                      +..+++.|+|+|..+...++... ....++|.+..+++++.+...    ..+.....+.        .+.+     .+.|
T Consensus       123 ~~~~~l~iiGaG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~~~--------~~a~-----~~aD  189 (320)
T d1omoa_         123 KNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQP--------AEEA-----SRCD  189 (320)
T ss_dssp             TTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECC--------HHHH-----TSSS
T ss_pred             CCccEEEEecCcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccccch--------hhhh-----cccc
Confidence            45578899999999988777665 467889999999998866543    3444333221        1222     2689


Q ss_pred             EEEECCCChHH-HHHHHHHhhcCCceEEEECccCCCCceecCHH
Q 017457          257 YCFECIGLTSV-MNDAFNSSREGWGKTVILGVEMHGSPISLNSI  299 (371)
Q Consensus       257 ~vid~~g~~~~-~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~  299 (371)
                      +|+-++.+..- +.  .+.++++ -++..+|... .....++..
T Consensus       190 iV~taT~s~~P~~~--~~~l~~G-~hv~~iGs~~-p~~~Eld~~  229 (320)
T d1omoa_         190 VLVTTTPSRKPVVK--AEWVEEG-THINAIGADG-PGKQELDVE  229 (320)
T ss_dssp             EEEECCCCSSCCBC--GGGCCTT-CEEEECSCCS-TTCCCBCHH
T ss_pred             EEEEeccCcccccc--hhhcCCC-CeEeecCCcc-ccccccCHH
Confidence            99988876431 22  2357886 7888888743 334455554

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=85.83  E-value=0.33  Score=38.80  Aligned_cols=31  Identities=26%  Similarity=0.155  Sum_probs=28.2

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  217 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~  217 (371)
                      .++|+|+|+.|+.++..|..+|. +|.+++..
T Consensus         7 DlvVIG~GpaGl~aA~~aa~~G~-~V~liE~~   37 (220)
T d1lvla1           7 TLLIIGGGPGGYVAAIRAGQLGI-PTVLVEGQ   37 (220)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTC-CEEEECSS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-cEEEEecC
Confidence            58899999999999999999999 89999864

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=85.79  E-value=0.79  Score=39.13  Aligned_cols=34  Identities=24%  Similarity=0.284  Sum_probs=29.9

Q ss_pred             CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC
Q 017457          182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI  216 (371)
Q Consensus       182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~  216 (371)
                      ...+++||+|+ |.+|...+..+...|. +|+++++
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~-~V~~~d~   48 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQ-KVVGLDN   48 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEEC
Confidence            34578999998 9999999999999999 9999874

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=85.74  E-value=0.37  Score=40.81  Aligned_cols=33  Identities=18%  Similarity=0.142  Sum_probs=29.2

Q ss_pred             CeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      -.|+|+|||..|++++..++..|. .|.+.++++
T Consensus         8 ~dV~IIGAG~sGl~~a~~L~~~G~-~v~i~Ek~~   40 (298)
T d1w4xa1           8 VDVLVVGAGFSGLYALYRLRELGR-SVHVIETAG   40 (298)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             CCEEEECccHHHHHHHHHHHhCCC-CEEEEEcCC
Confidence            368999999999999999999999 899998654

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=85.69  E-value=0.44  Score=40.06  Aligned_cols=33  Identities=30%  Similarity=0.264  Sum_probs=30.1

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEc
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVD  215 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~  215 (371)
                      -.|++|+|.|-|.+|..+++++...|+ +|++++
T Consensus        34 L~gktvaIqGfGnVG~~~A~~L~e~Ga-kvv~vs   66 (293)
T d1hwxa1          34 FGDKTFAVQGFGNVGLHSMRYLHRFGA-KCVAVG   66 (293)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEE
Confidence            367899999999999999999999999 888776

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=85.67  E-value=2.5  Score=32.13  Aligned_cols=100  Identities=23%  Similarity=0.314  Sum_probs=59.9

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEE-cC--ChhHHHHHHHh----C---cc-------eEEcCCCC---CCccHHH
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGV-DI--NPEKFEIGKKF----G---IT-------DFINPATC---GDKTVSQ  245 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~-~~--~~~~~~~~~~l----g---a~-------~v~~~~~~---~~~~~~~  245 (371)
                      +|.|.|-|-+|.++...+...+. .|+++ +.  +.+.+..+-+.    |   .+       .+++.+..   ...+. +
T Consensus         2 kIgINGfGRIGR~~~R~~~~~~~-~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p-~   79 (169)
T d1dssg1           2 KIGINGFGRIGRLVLRAALEMGA-QVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKP-E   79 (169)
T ss_dssp             CEEEECCSHHHHHHHHHHHHHTC-CEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSG-G
T ss_pred             eEEEECCcHHHHHHHHHHHhCCC-cEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCCh-H
Confidence            57899999999999998888888 56555 32  33555555432    1   10       11111000   00111 0


Q ss_pred             HHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccC
Q 017457          246 VIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM  289 (371)
Q Consensus       246 ~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  289 (371)
                      .+ .|..-++|+|+||+|--...+.+..++..+ .+-|.++.+.
T Consensus        80 ~i-~W~~~gvD~ViEcTG~f~~~~~~~~hl~~g-akkViisaP~  121 (169)
T d1dssg1          80 NI-PWSKAGAEYIVESTGVFTTIEKASAHFKGG-AKKVIISAPS  121 (169)
T ss_dssp             GC-CHHHHTCCEEEECSSSCCSHHHHGGGGTTT-CSEEEESSCC
T ss_pred             HC-CccccCCCEEEecCceEcCHHHHHHHHhcC-CceEeecCCc
Confidence            11 111118999999999877677888888876 6666676543

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=85.61  E-value=0.37  Score=38.33  Aligned_cols=31  Identities=23%  Similarity=0.195  Sum_probs=27.4

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  217 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~  217 (371)
                      .|+|+|+|+.|+.++..|..+|. +|.++++.
T Consensus         5 DviVIG~GpaGl~aA~~aar~G~-kV~vIEk~   35 (223)
T d1ebda1           5 ETLVVGAGPGGYVAAIRAAQLGQ-KVTIVEKG   35 (223)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-EEEEEecC
Confidence            37889999999999999999999 89988754

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=85.45  E-value=3.5  Score=35.79  Aligned_cols=55  Identities=24%  Similarity=0.146  Sum_probs=40.3

Q ss_pred             CCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcC---ChhHHHHHHHhCcceEEcC
Q 017457          180 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI---NPEKFEIGKKFGITDFINP  235 (371)
Q Consensus       180 ~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~---~~~~~~~~~~lga~~v~~~  235 (371)
                      +++++.+|+-..+|..|.+.+..|+.+|. +++++.+   +++|.+.++.+|++-+...
T Consensus       140 ~~~~g~~VVeaSSGN~GiAlA~~aa~lGi-k~~Iv~P~~~~~~K~~~ira~GAeVi~~~  197 (382)
T d1wkva1         140 RVEKGSLVADATSSNFGVALSAVARLYGY-RARVYLPGAAEEFGKLLPRLLGAQVIVDP  197 (382)
T ss_dssp             TSCTTCEEEEECCHHHHHHHHHHHHHTTC-EEEEEEETTSCHHHHHHHHHTTCEEEEET
T ss_pred             ccCCCCEEEEeCCcHHHHHHHHHHHHcCC-CEEEEeeccccccccccccccCcceeecC
Confidence            46777765444569999999999999999 5544432   4567888899999866543

>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Aclacinomycin-10-hydroxylase RdmB
species: Streptomyces purpurascens [TaxId: 1924]

Probab=85.33  E-value=0.16  Score=42.26  Aligned_cols=96  Identities=15%  Similarity=0.096  Sum_probs=59.6

Q ss_pred             HcCCCCCCeEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHH----HHhCc-c--eEEcCCCCCCccHHHHHHH
Q 017457          178 VAGVEVGSTVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPEKFEIG----KKFGI-T--DFINPATCGDKTVSQVIKE  249 (371)
Q Consensus       178 ~~~~~~g~~VLI~G~g~~G~~ai~la~~~-g~~~Vi~~~~~~~~~~~~----~~lga-~--~v~~~~~~~~~~~~~~i~~  249 (371)
                      ...+...++||=+|+|. |..+..++++. ++ ++++++. ++-.+.+    .+.|. +  .++..+.     +     +
T Consensus        76 ~~d~~~~~~vlDvG~G~-G~~~~~l~~~~P~~-~~~~~Dl-p~~~~~a~~~~~~~~~~~ri~~~~~d~-----~-----~  142 (256)
T d1qzza2          76 AYDWSAVRHVLDVGGGN-GGMLAAIALRAPHL-RGTLVEL-AGPAERARRRFADAGLADRVTVAEGDF-----F-----K  142 (256)
T ss_dssp             TSCCTTCCEEEEETCTT-SHHHHHHHHHCTTC-EEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCT-----T-----S
T ss_pred             cCCCccCCEEEEECCCC-CHHHHHHHHhhcCc-EEEEecC-hHHHHHHHHHHhhcCCcceeeeeeeec-----c-----c
Confidence            34567778899888866 78888999876 56 8999985 4444433    33342 2  1222211     0     1


Q ss_pred             hhCCCcCEEEEC--C---CCh---HHHHHHHHHhhcCCceEEEECc
Q 017457          250 MTDGGADYCFEC--I---GLT---SVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       250 ~~~gg~d~vid~--~---g~~---~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      ..+.++|+++-.  .   +.+   ..++.+.+.|+|+ |+++.+..
T Consensus       143 ~~p~~~D~v~~~~vLh~~~d~~~~~lL~~i~~~Lkpg-G~llI~d~  187 (256)
T d1qzza2         143 PLPVTADVVLLSFVLLNWSDEDALTILRGCVRALEPG-GRLLVLDR  187 (256)
T ss_dssp             CCSCCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             cccccchhhhccccccccCcHHHHHHHHHHHhhcCCc-ceeEEEEe
Confidence            112278988732  1   112   2467888999998 99988764

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=85.31  E-value=0.39  Score=37.57  Aligned_cols=33  Identities=18%  Similarity=0.071  Sum_probs=28.3

Q ss_pred             CCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457          184 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  217 (371)
Q Consensus       184 g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~  217 (371)
                      ...|+|+|+|+.|+.++..|...|. ++++++..
T Consensus         5 ~~~VvIIGgGpaGl~aA~~~ar~g~-~v~vie~~   37 (192)
T d1vdca1           5 NTRLCIVGSGPAAHTAAIYAARAEL-KPLLFEGW   37 (192)
T ss_dssp             EEEEEEECCSHHHHHHHHHHHHTTC-CCEEECCS
T ss_pred             cceEEEECCCHHHHHHHHHHHHcCC-cEEEEEee
Confidence            4679999999999999988888999 78888743

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=85.23  E-value=6.2  Score=29.81  Aligned_cols=96  Identities=18%  Similarity=0.197  Sum_probs=57.3

Q ss_pred             eEEEEcCChHHHHHHHHHHHc---CCCeEEEEcC--ChhHHHHHHHh----C---cc---------------eEEcCCCC
Q 017457          186 TVAIFGLGAVGLAVAEGARLN---RASKIIGVDI--NPEKFEIGKKF----G---IT---------------DFINPATC  238 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~---g~~~Vi~~~~--~~~~~~~~~~l----g---a~---------------~v~~~~~~  238 (371)
                      +|.|.|-|-+|.++...+...   .. .|+++-.  +.+.+..+-+.    |   .+               .+++.++-
T Consensus         2 kIgINGfGRIGR~v~R~~~~~~~~~i-~vvaINd~~~~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~p   80 (169)
T d1hdgo1           2 RVAINGFGRIGRLVYRIIYERKNPDI-EVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPDP   80 (169)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTCTTC-EEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred             EEEEECCChHHHHHHHHHHhccCCCE-EEEEeccCccHHHHHHHHhccccccccCceEEEECCEEEECCEEEEEEeCCCh
Confidence            688999999999999877643   35 6666632  33445554332    1   00               11111110


Q ss_pred             CCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCC
Q 017457          239 GDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH  290 (371)
Q Consensus       239 ~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~  290 (371)
                      .+-.|.+       -++|+|+||+|--.....+..++..+ -.-+.++.+..
T Consensus        81 ~~i~W~~-------~gvD~ViEcTG~f~t~~~~~~hl~~G-akkViiSAP~k  124 (169)
T d1hdgo1          81 SKLPWKD-------LGVDFVIESTGVFRNREKAELHLQAG-AKKVIITAPAK  124 (169)
T ss_dssp             GGSCHHH-------HTCCEEEECSSSCCBHHHHTHHHHTT-CSEEEESSCCB
T ss_pred             hhCCccc-------cCCCEEEEecceeccccchhhhccCC-CceEEEecccC
Confidence            1111211       17999999999866678888889886 65566665443

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=85.21  E-value=0.32  Score=37.42  Aligned_cols=27  Identities=33%  Similarity=0.441  Sum_probs=24.3

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCC
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRAS  209 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~  209 (371)
                      ++++|+|+|+|.+|+-++..++.+|.+
T Consensus         2 ~~~~VvIIGgG~~G~e~A~~l~~~g~~   28 (185)
T d1q1ra1           2 ANDNVVIVGTGLAGVEVAFGLRASGWE   28 (185)
T ss_dssp             CSCEEEEECCSHHHHHHHHHHHHTTCC
T ss_pred             CCCCEEEECCcHHHHHHHHHHHHcCCc
Confidence            578999999999999999999999983

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=85.13  E-value=0.68  Score=37.63  Aligned_cols=34  Identities=29%  Similarity=0.284  Sum_probs=28.7

Q ss_pred             CCCCCeEEEEcCChHHHHHHHHH-HHcCCCeEEEEc
Q 017457          181 VEVGSTVAIFGLGAVGLAVAEGA-RLNRASKIIGVD  215 (371)
Q Consensus       181 ~~~g~~VLI~G~g~~G~~ai~la-~~~g~~~Vi~~~  215 (371)
                      --+|++|+|.|.|.+|..+++++ +..|+ +|++++
T Consensus        28 ~l~g~~vaIqG~GnVG~~~a~~L~~e~Ga-~vv~vs   62 (234)
T d1b26a1          28 DPKKATVAVQGFGNVGQFAALLISQELGS-KVVAVS   62 (234)
T ss_dssp             CTTTCEEEEECCSHHHHHHHHHHHHHHCC-EEEEEE
T ss_pred             CcCCCEEEEECCCHHHHHHHHHHHHhcCC-ceEEee
Confidence            34689999999999999998877 67899 787775

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=85.03  E-value=0.32  Score=41.63  Aligned_cols=32  Identities=28%  Similarity=0.294  Sum_probs=25.8

Q ss_pred             eEEEEcCChHHHHHHHHHH-----HcCCCeEEEEcCCh
Q 017457          186 TVAIFGLGAVGLAVAEGAR-----LNRASKIIGVDINP  218 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~-----~~g~~~Vi~~~~~~  218 (371)
                      -|+|+|+|+.|++++.++.     ..|+ +|+++++.+
T Consensus         9 DV~IvGaG~aGl~lA~~La~~~~~~~G~-~v~vlEr~~   45 (360)
T d1pn0a1           9 DVLIVGAGPAGLMAARVLSEYVRQKPDL-KVRIIDKRS   45 (360)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHHHHSTTC-CEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHhcccccCCC-cEEEEcCCC
Confidence            5899999999988776663     5799 899998643

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=84.99  E-value=0.42  Score=39.40  Aligned_cols=32  Identities=16%  Similarity=0.152  Sum_probs=27.8

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      .|+|+|+|.+|+.++..+...|. +|+++++.+
T Consensus         6 DvvIIGaGi~Gls~A~~La~~G~-~V~vlE~~~   37 (276)
T d1ryia1           6 EAVVIGGGIIGSAIAYYLAKENK-NTALFESGT   37 (276)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence            48999999999998888888898 999998753

>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Possible histamine N-methyltransferase TM1293
species: Thermotoga maritima [TaxId: 2336]

Probab=84.81  E-value=0.73  Score=36.21  Aligned_cols=90  Identities=18%  Similarity=0.224  Sum_probs=58.3

Q ss_pred             CCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEE
Q 017457          180 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCF  259 (371)
Q Consensus       180 ~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vi  259 (371)
                      .+.++.+||=+|+|. |..+..+     . ++++++.+++..+.+++.+...+....+    ++     ...++.+|+|+
T Consensus        33 ~~~~~~~vLDiGcG~-G~~~~~~-----~-~~~giD~s~~~~~~a~~~~~~~~~~d~~----~l-----~~~~~~fD~I~   96 (208)
T d1vlma_          33 CLLPEGRGVEIGVGT-GRFAVPL-----K-IKIGVEPSERMAEIARKRGVFVLKGTAE----NL-----PLKDESFDFAL   96 (208)
T ss_dssp             HHCCSSCEEEETCTT-STTHHHH-----T-CCEEEESCHHHHHHHHHTTCEEEECBTT----BC-----CSCTTCEEEEE
T ss_pred             hhCCCCeEEEECCCC-ccccccc-----c-eEEEEeCChhhccccccccccccccccc----cc-----ccccccccccc
Confidence            345677899999853 4444333     2 5789999999999988876543332211    11     11123799998


Q ss_pred             ECCC-----Ch-HHHHHHHHHhhcCCceEEEEC
Q 017457          260 ECIG-----LT-SVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       260 d~~g-----~~-~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      ..-.     +. ..++.+.+.|+++ |.++...
T Consensus        97 ~~~~l~h~~d~~~~l~~~~~~L~pg-G~l~i~~  128 (208)
T d1vlma_          97 MVTTICFVDDPERALKEAYRILKKG-GYLIVGI  128 (208)
T ss_dssp             EESCGGGSSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             cccccccccccccchhhhhhcCCCC-ceEEEEe
Confidence            5432     22 2478899999998 9887764

>d1ixka_ c.66.1.38 (A:) Hypothetical methyltransferase PH1374 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Hypothetical methyltransferase PH1374
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=84.79  E-value=2.2  Score=36.03  Aligned_cols=99  Identities=17%  Similarity=0.261  Sum_probs=59.7

Q ss_pred             HcCCCCCCeEEEEcC--ChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHH----HhCcceEEcCCCCCCccHHHHHHHh
Q 017457          178 VAGVEVGSTVAIFGL--GAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGK----KFGITDFINPATCGDKTVSQVIKEM  250 (371)
Q Consensus       178 ~~~~~~g~~VLI~G~--g~~G~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~----~lga~~v~~~~~~~~~~~~~~i~~~  250 (371)
                      ....++|++||=+-|  |+-   +.+++..++ -..+++.+.++.|...++    .+|...++.... +...+     ..
T Consensus       111 ~l~~~~g~~vlD~CAapGgK---t~~l~~~~~~~~~i~a~d~~~~r~~~l~~~~~r~~~~~i~~~~~-d~~~~-----~~  181 (313)
T d1ixka_         111 ALDPKPGEIVADMAAAPGGK---TSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHS-SSLHI-----GE  181 (313)
T ss_dssp             HHCCCTTCEEEECCSSCSHH---HHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESS-CGGGG-----GG
T ss_pred             cccCCccceeeecccchhhh---hHhhhhhcccccceeeeccCHHHHHHHHHHHHHHHhhccccccc-ccccc-----cc
Confidence            356899999887743  443   334444443 227999999999887654    477655443222 00111     12


Q ss_pred             hCCCcCEEE-E--CCCCh-------------------------HHHHHHHHHhhcCCceEEEEC
Q 017457          251 TDGGADYCF-E--CIGLT-------------------------SVMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       251 ~~gg~d~vi-d--~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g  286 (371)
                      ..+.||.|+ |  |+|..                         ..+..+++.++++ |++|...
T Consensus       182 ~~~~fD~ILvDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lk~g-G~lVYsT  244 (313)
T d1ixka_         182 LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPG-GILVYST  244 (313)
T ss_dssp             GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             ccccccEEEEccccccCCceeeccchhhhhhhhHHHHHHHHHHHHHHhhhheeCCC-cEEEEee
Confidence            233789887 5  55542                         1467788888897 8877654

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=84.66  E-value=0.43  Score=38.34  Aligned_cols=32  Identities=25%  Similarity=0.214  Sum_probs=28.2

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      -|+|+|+|+.|+.|+..|..+|. +|.+++..+
T Consensus         8 DviIIG~GPaGlsaA~~aa~~G~-~V~viE~~~   39 (229)
T d1ojta1           8 DVVVLGGGPGGYSAAFAAADEGL-KVAIVERYK   39 (229)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-eEEEEeccC
Confidence            47889999999999999999999 899997543

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=84.52  E-value=0.44  Score=40.14  Aligned_cols=32  Identities=31%  Similarity=0.489  Sum_probs=28.2

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      -|+|+|+|..|+.++.-|...|+ +|+++++.+
T Consensus        18 DVlVIG~G~aGl~aA~~la~~G~-~V~lvEK~~   49 (308)
T d1y0pa2          18 DVVVVGSGGAGFSAAISATDSGA-KVILIEKEP   49 (308)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-cEEEEecCC
Confidence            58999999999999998888999 899998643

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=84.48  E-value=0.77  Score=35.90  Aligned_cols=39  Identities=28%  Similarity=0.330  Sum_probs=32.4

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK  226 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~  226 (371)
                      +|.|+|.|-+|+..+.++ +.|. +|++.+.++++.+.+..
T Consensus         2 kI~ViGlG~vGl~~a~~~-a~g~-~V~g~Din~~~v~~l~~   40 (196)
T d1dlja2           2 KIAVAGSGYVGLSLGVLL-SLQN-EVTIVDILPSKVDKINN   40 (196)
T ss_dssp             EEEEECCSHHHHHHHHHH-TTTS-EEEEECSCHHHHHHHHT
T ss_pred             EEEEECCChhHHHHHHHH-HCCC-cEEEEECCHHHHHHHhh
Confidence            578889999998876555 5799 99999999998887764

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=84.38  E-value=0.86  Score=32.38  Aligned_cols=36  Identities=14%  Similarity=0.038  Sum_probs=27.3

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCC--eEEEEcCC
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRAS--KIIGVDIN  217 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~--~Vi~~~~~  217 (371)
                      ..+++++|+|+|.+|.=.+..+..+|.+  .|+++.+.
T Consensus        18 ~~p~~v~ivGgG~ig~E~A~~l~~l~~~~~~Vtli~~~   55 (117)
T d1aoga2          18 EPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRG   55 (117)
T ss_dssp             SCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESS
T ss_pred             hcCCeEEEECCcHHHHHHHHHhhhcccCCcEEEEEecc
Confidence            3458999999999998877777666542  68888754

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.27  E-value=0.44  Score=38.12  Aligned_cols=31  Identities=26%  Similarity=0.203  Sum_probs=27.2

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  217 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~  217 (371)
                      -|+|+|+|+.|+.|+..|..+|. +|++++..
T Consensus         7 DviVIG~GpAGl~aA~~aa~~G~-kV~lie~~   37 (233)
T d1v59a1           7 DVVIIGGGPAGYVAAIKAAQLGF-NTACVEKR   37 (233)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-cEEEEEec
Confidence            57899999999999888888999 88888754

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=84.22  E-value=0.27  Score=37.91  Aligned_cols=82  Identities=21%  Similarity=0.235  Sum_probs=50.9

Q ss_pred             eEEEEcCChHHHHHHHHHHHc-CCCeEEEE-cCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCC
Q 017457          186 TVAIFGLGAVGLAVAEGARLN-RASKIIGV-DINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG  263 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~-g~~~Vi~~-~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g  263 (371)
                      +|.|+|.|.+|...+...+.. ++ .++++ ++++++.      ....+..+.+     .    ..+ ...+|+|+.|++
T Consensus         5 rvgiiG~G~ig~~~~~~l~~~~~~-elvav~~~~~~~~------~~~~~~~~~~-----~----~~~-~~~~D~Vvi~tp   67 (170)
T d1f06a1           5 RVAIVGYGNLGRSVEKLIAKQPDM-DLVGIFSRRATLD------TKTPVFDVAD-----V----DKH-ADDVDVLFLCMG   67 (170)
T ss_dssp             EEEEECCSHHHHHHHHHHTTCSSE-EEEEEEESSSCCS------SSSCEEEGGG-----G----GGT-TTTCSEEEECSC
T ss_pred             eEEEECChHHHHHHHHHHHhCCCc-EEEEEEecccccc------cccccccchh-----h----hhh-ccccceEEEeCC
Confidence            589999999998877777654 56 44444 4443321      1111222111     1    111 126899999998


Q ss_pred             ChHHHHHHHHHhhcCCceEEEE
Q 017457          264 LTSVMNDAFNSSREGWGKTVIL  285 (371)
Q Consensus       264 ~~~~~~~~~~~l~~~~G~~v~~  285 (371)
                      .....+.+.++|..+ -.++.+
T Consensus        68 ~~~h~~~a~~aL~aG-~~vv~~   88 (170)
T d1f06a1          68 SATDIPEQAPKFAQF-ACTVDT   88 (170)
T ss_dssp             TTTHHHHHHHHHTTT-SEEECC
T ss_pred             CcccHHHHHHHHHCC-CcEEEe
Confidence            877688999999986 565543

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=84.17  E-value=3.9  Score=31.65  Aligned_cols=105  Identities=15%  Similarity=0.175  Sum_probs=59.9

Q ss_pred             HHcCCCCCCeEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHHh----Ccc-eEEcCCCCCCccHHHHHHHh
Q 017457          177 KVAGVEVGSTVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKF----GIT-DFINPATCGDKTVSQVIKEM  250 (371)
Q Consensus       177 ~~~~~~~g~~VLI~G~g~~G~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~l----ga~-~v~~~~~~~~~~~~~~i~~~  250 (371)
                      ....+++++.++=.+.|.=|+.. .+++.. +. +|++++.+++..+.+++.    +.. .+++..-   .++...+...
T Consensus        17 ~~l~~~~~~~~lD~t~G~Gghs~-~il~~~~~~-~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f---~~~~~~~~~~   91 (192)
T d1m6ya2          17 EFLKPEDEKIILDCTVGEGGHSR-AILEHCPGC-RIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSY---READFLLKTL   91 (192)
T ss_dssp             HHHCCCTTCEEEETTCTTSHHHH-HHHHHCTTC-EEEEEESCHHHHHHHHHHTGGGTTTEEEEECCG---GGHHHHHHHT
T ss_pred             HhhCCCCCCEEEEecCCCcHHHH-HHHhcCCCC-eEEEeechHHHHHHHHHhhccccccccchhHHH---hhHHHHHHHc
Confidence            34567788865443334434433 444443 55 999999999998888663    322 2333322   3444444444


Q ss_pred             hCCCcCEEE-ECCCCh--------------HHHHHHHHHhhcCCceEEEECc
Q 017457          251 TDGGADYCF-ECIGLT--------------SVMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       251 ~~gg~d~vi-d~~g~~--------------~~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      ....+|.|+ |..-++              ..+..+.+.++++ |+++.+..
T Consensus        92 ~~~~vdgIl~DlGvSs~Qld~~~r~~~~~~~~L~~a~~~Lk~g-G~l~ii~f  142 (192)
T d1m6ya2          92 GIEKVDGILMDLGVSTYQLKGENRELENLKEFLKKAEDLLNPG-GRIVVISF  142 (192)
T ss_dssp             TCSCEEEEEEECSCCHHHHHTSHTHHHHHHHHHHHGGGGEEEE-EEEEEEES
T ss_pred             CCCCcceeeeccchhHhhhhhhhccchhHHHHHHHHHHhcCCC-Ceeeeecc
Confidence            334788775 643222              2355666677776 77766543

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.85  E-value=0.51  Score=40.37  Aligned_cols=33  Identities=24%  Similarity=0.211  Sum_probs=28.6

Q ss_pred             CeE-EEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          185 STV-AIFGL-GAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       185 ~~V-LI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      ++| ||+|+ |-+|...+..+...|+ +|+++++..
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~-~V~~i~r~~   35 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGY-EVHGIVRRS   35 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcC-EEEEEECCC
Confidence            457 99998 9999999999988999 999998743

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=83.80  E-value=0.43  Score=40.30  Aligned_cols=32  Identities=19%  Similarity=0.266  Sum_probs=28.1

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      .|+|+|||..|+.++..+...|. +|.+++.++
T Consensus         3 dv~IIGaG~sGl~~A~~L~~~g~-~V~iiEk~~   34 (298)
T d1i8ta1           3 DYIIVGSGLFGAVCANELKKLNK-KVLVIEKRN   34 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHGGGTC-CEEEECSSS
T ss_pred             cEEEECCcHHHHHHHHHHHhCCC-cEEEEECCC
Confidence            48999999999999999988898 899998654

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=83.77  E-value=1.1  Score=33.63  Aligned_cols=38  Identities=16%  Similarity=0.207  Sum_probs=31.9

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhH
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK  220 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~  220 (371)
                      |..+|-|+|+|.+|...+.++...+...+...+.++++
T Consensus         2 p~~KI~IIGaG~VG~~~a~~l~~~~l~el~L~Di~~~~   39 (150)
T d1t2da1           2 PKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNM   39 (150)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSH
T ss_pred             CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEeccCCc
Confidence            45689999999999988888888888899999977755

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=83.63  E-value=0.84  Score=35.62  Aligned_cols=87  Identities=14%  Similarity=0.112  Sum_probs=58.1

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC  261 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~  261 (371)
                      -.+++|.|+|.|.+|...+++++..|. +|++.++.....       .......     .++.+.+.     ..|++.-+
T Consensus        42 l~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~-------~~~~~~~-----~~l~ell~-----~sDii~i~  103 (188)
T d1sc6a1          42 ARGKKLGIIGYGHIGTQLGILAESLGM-YVYFYDIENKLP-------LGNATQV-----QHLSDLLN-----MSDVVSLH  103 (188)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCCC-------CTTCEEC-----SCHHHHHH-----HCSEEEEC
T ss_pred             ccceEEEEeecccchhhhhhhcccccc-eEeeccccccch-------hhhhhhh-----hhHHHHHh-----hccceeec
Confidence            357899999999999999999999999 999998653211       0111111     23333333     36888766


Q ss_pred             CCC-hH----HHHHHHHHhhcCCceEEEECc
Q 017457          262 IGL-TS----VMNDAFNSSREGWGKTVILGV  287 (371)
Q Consensus       262 ~g~-~~----~~~~~~~~l~~~~G~~v~~g~  287 (371)
                      .+- +.    .-...++.|+++ ..+|..+.
T Consensus       104 ~plt~~T~~li~~~~l~~mk~~-a~lIN~aR  133 (188)
T d1sc6a1         104 VPENPSTKNMMGAKEISLMKPG-SLLINASR  133 (188)
T ss_dssp             CCSSTTTTTCBCHHHHHHSCTT-EEEEECSC
T ss_pred             ccCCcchhhhccHHHHhhCCCC-CEEEEcCc
Confidence            552 21    135778888887 88887764

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=83.61  E-value=0.48  Score=39.30  Aligned_cols=60  Identities=17%  Similarity=0.311  Sum_probs=36.3

Q ss_pred             eEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCC-CcCEEEECCC
Q 017457          186 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIG  263 (371)
Q Consensus       186 ~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g-g~d~vid~~g  263 (371)
                      +|||+|+ |.+|...+..+...|.  ++++++....      +    ..|-.     + .+.+.+.... ++|+||++.+
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~--~v~~~~~~~~------~----~~Dl~-----~-~~~~~~~i~~~~~D~Vih~Aa   63 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN--LIALDVHSKE------F----CGDFS-----N-PKGVAETVRKLRPDVIVNAAA   63 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE--EEEECTTCSS------S----CCCTT-----C-HHHHHHHHHHHCCSEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC--EEEEECCCcc------c----cCcCC-----C-HHHHHHHHHHcCCCEEEEecc
Confidence            5999998 9999998887776664  5555543211      1    01111     1 1223333333 7899999876

>d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class I ketol-acid reductoisomerase (KARI)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=83.50  E-value=5.6  Score=30.26  Aligned_cols=87  Identities=17%  Similarity=0.177  Sum_probs=59.3

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcC-ChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI-NPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE  260 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~-~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid  260 (371)
                      -++++|.|+|=|.-|.+.++-+|=.|. +|++--+ .....+.+++-|.+ ++        +..+.++     ..|+|.-
T Consensus        14 ik~k~IaViGYGsQG~AhAlNLrDSG~-~V~VGLr~gs~s~~~A~~~Gf~-v~--------~~~eA~~-----~aDiim~   78 (182)
T d1np3a2          14 IQGKKVAIIGYGSQGHAHACNLKDSGV-DVTVGLRSGSATVAKAEAHGLK-VA--------DVKTAVA-----AADVVMI   78 (182)
T ss_dssp             HHTSCEEEECCSHHHHHHHHHHHHTTC-CEEEECCTTCHHHHHHHHTTCE-EE--------CHHHHHH-----TCSEEEE
T ss_pred             HCCCEEEEEeeCcHhHHHHhhhhhcCC-CEEEEcCCCCccHHHHhhhccc-cc--------cHHHHhh-----hcCeeee
Confidence            367899999999999999999999999 5555444 44456777777765 32        3334433     5899998


Q ss_pred             CCCChHHHHHHH-----HHhhcCCceEEEEC
Q 017457          261 CIGLTSVMNDAF-----NSSREGWGKTVILG  286 (371)
Q Consensus       261 ~~g~~~~~~~~~-----~~l~~~~G~~v~~g  286 (371)
                      .++++. -...+     ..|++  |....|+
T Consensus        79 L~PD~~-q~~vy~~~I~p~lk~--g~~L~Fa  106 (182)
T d1np3a2          79 LTPDEF-QGRLYKEEIEPNLKK--GATLAFA  106 (182)
T ss_dssp             CSCHHH-HHHHHHHHTGGGCCT--TCEEEES
T ss_pred             ecchHH-HHHHHHHhhhhhcCC--CcEEEEe
Confidence            888765 34444     34555  4444454

>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TRM1-like
domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=83.42  E-value=3.3  Score=35.88  Aligned_cols=91  Identities=15%  Similarity=0.161  Sum_probs=60.6

Q ss_pred             cCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcceE--------------EcCCCCCCccHHHHHHHhhC
Q 017457          191 GLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDF--------------INPATCGDKTVSQVIKEMTD  252 (371)
Q Consensus       191 G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~v--------------~~~~~~~~~~~~~~i~~~~~  252 (371)
                      +.++.|.-++.+|+..|+.+|++.+.+++..+.+++    .+....              +....   .+....+. ..+
T Consensus        52 ~~sasG~rsiRya~E~~~~~V~~nDis~~A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~---~Da~~~~~-~~~  127 (375)
T d2dula1          52 ALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINH---DDANRLMA-ERH  127 (375)
T ss_dssp             SSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEE---SCHHHHHH-HST
T ss_pred             cCCCccHHHHHHHHhCCCCEEEEecCCHHHHHHHHHHHHhcCccccccccccccccccceeEeeh---hhhhhhhH-hhc
Confidence            446678899999998898899999999999888865    221110              00001   22322222 222


Q ss_pred             CCcCEE-EECCCChH-HHHHHHHHhhcCCceEEEEC
Q 017457          253 GGADYC-FECIGLTS-VMNDAFNSSREGWGKTVILG  286 (371)
Q Consensus       253 gg~d~v-id~~g~~~-~~~~~~~~l~~~~G~~v~~g  286 (371)
                      ..||+| +|..|++. .+..++++++.+ |.+....
T Consensus       128 ~~fDvIDiDPfGs~~pfldsAi~a~~~~-Gll~vTa  162 (375)
T d2dula1         128 RYFHFIDLDPFGSPMEFLDTALRSAKRR-GILGVTA  162 (375)
T ss_dssp             TCEEEEEECCSSCCHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CcCCcccCCCCCCcHHHHHHHHHHhccC-CEEEEEe
Confidence            379987 59988743 478999999987 8766554

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.36  E-value=0.43  Score=40.56  Aligned_cols=31  Identities=19%  Similarity=0.280  Sum_probs=27.5

Q ss_pred             EEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          187 VAIFGLGAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       187 VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      |+|+|+|..|+.++..++..|. +|++++.++
T Consensus         2 ViVIGaG~aGL~aA~~L~~~G~-~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGGGISGMAAAKLLHDSGL-NVVVLEARD   32 (383)
T ss_dssp             EEEECCBHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             EEEECCCHHHHHHHHHHHhCCC-CEEEEecCC
Confidence            7899999999999999999999 899998543

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.27  E-value=0.53  Score=37.34  Aligned_cols=30  Identities=30%  Similarity=0.256  Sum_probs=27.1

Q ss_pred             EEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457          187 VAIFGLGAVGLAVAEGARLNRASKIIGVDIN  217 (371)
Q Consensus       187 VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~  217 (371)
                      |+|+|+|+.|+.++..|..+|. +|.+++..
T Consensus         6 viIIG~GpaG~~aA~~aar~G~-kV~vIEk~   35 (221)
T d3grsa1           6 YLVIGGGSGGLASARRAAELGA-RAAVVESH   35 (221)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence            7888999999999999999999 89998753

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=82.99  E-value=0.56  Score=39.28  Aligned_cols=32  Identities=25%  Similarity=0.332  Sum_probs=26.1

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  217 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~  217 (371)
                      .|+|+|+|.+|++++.-+...|.++|++++++
T Consensus         3 dViIIGaGi~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           3 RIVIIGAGIVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCcEEEEeCC
Confidence            49999999999987776666787469999865

>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=82.87  E-value=0.52  Score=37.40  Aligned_cols=30  Identities=20%  Similarity=0.163  Sum_probs=26.9

Q ss_pred             EEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457          187 VAIFGLGAVGLAVAEGARLNRASKIIGVDIN  217 (371)
Q Consensus       187 VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~  217 (371)
                      |+|+|+|+-|+.|+..|...|. +|.+++..
T Consensus         6 viIIGgGpAGl~aA~~aar~G~-~V~viE~~   35 (229)
T d3lada1           6 VIVIGAGPGGYVAAIKSAQLGL-KTALIEKY   35 (229)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTC-CEEEEECC
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-eEEEEecc
Confidence            7888999999999999999999 89998753

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=82.84  E-value=2.4  Score=30.22  Aligned_cols=87  Identities=14%  Similarity=0.088  Sum_probs=49.1

Q ss_pred             CCCeEEEEcCChH--H------HHHHHHH---HHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhh
Q 017457          183 VGSTVAIFGLGAV--G------LAVAEGA---RLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       183 ~g~~VLI~G~g~~--G------~~ai~la---~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~  251 (371)
                      ..++|||+|+|+.  |      .+.+|.+   |..|+ +++.+..+++....-..+ +|+++-  +   +-..+.+.+..
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~-~~IliN~NPeTVstd~d~-aD~lYf--e---plt~e~v~~Ii   75 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGY-ETIMVNCNPETVSTDYDT-SDRLYF--E---PVTLEDVLEIV   75 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTC-EEEEECCCTTSSTTSTTS-SSEEEC--C---CCSHHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCC-eEEEEecChhhhhcChhh-cCceEE--c---cCCHHHHHHHH
Confidence            4578999998742  2      4444444   55799 999999888765321111 344431  1   22233333333


Q ss_pred             CC-CcCEEEECCCChHHHHHHHHHhhc
Q 017457          252 DG-GADYCFECIGLTSVMNDAFNSSRE  277 (371)
Q Consensus       252 ~g-g~d~vid~~g~~~~~~~~~~~l~~  277 (371)
                      .. +.|.|+-..|+...++.+.+ |..
T Consensus        76 ~~E~p~~ii~~~GGQtalnla~~-L~~  101 (121)
T d1a9xa4          76 RIEKPKGVIVQYGGQTPLKLARA-LEA  101 (121)
T ss_dssp             HHHCCSEEECSSSTHHHHTTHHH-HHH
T ss_pred             HHhCCCEEEeehhhhhHHHHHHH-HHH
Confidence            33 67788877777764444443 444

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=82.65  E-value=0.86  Score=38.27  Aligned_cols=31  Identities=23%  Similarity=0.198  Sum_probs=26.6

Q ss_pred             CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC
Q 017457          185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDI  216 (371)
Q Consensus       185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~  216 (371)
                      ++|||+|+ |.+|...+..+...|. .+++++.
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~-~vi~~~~   34 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGD-VELVLRT   34 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTT-EEEECCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcC-EEEEecC
Confidence            58999998 9999999999988898 7777654

>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Phenylethanolamine N-methyltransferase, PNMTase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.52  E-value=0.51  Score=39.07  Aligned_cols=45  Identities=18%  Similarity=0.034  Sum_probs=32.6

Q ss_pred             CCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 017457          180 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK  226 (371)
Q Consensus       180 ~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~  226 (371)
                      +..+|+++|=+|+|+ |...+..+..... +|++++-++..++.+++
T Consensus        51 g~~~g~~vLDiGcG~-g~~~~~~~~~~~~-~v~~~D~S~~~i~~~~~   95 (263)
T d2g72a1          51 GEVSGRTLIDIGSGP-TVYQLLSACSHFE-DITMTDFLEVNRQELGR   95 (263)
T ss_dssp             SCSCCSEEEEETCTT-CCGGGTTGGGGCS-EEEEECSCHHHHHHHHH
T ss_pred             CCCCCcEEEEeccCC-CHHHHHHhcccCC-eEEEEeCCHHHHHHHHH
Confidence            456789999999865 4444333433444 89999999998888865

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=82.33  E-value=0.61  Score=38.50  Aligned_cols=31  Identities=26%  Similarity=0.327  Sum_probs=27.2

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  217 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~  217 (371)
                      -|+|+|+|.+|+.++..+...|. +|+++++.
T Consensus         5 DvvIIGaGi~Gls~A~~La~~G~-~V~viE~~   35 (281)
T d2gf3a1           5 DVIVVGAGSMGMAAGYQLAKQGV-KTLLVDAF   35 (281)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-cEEEEeCC
Confidence            38999999999998888888999 89999864

>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=82.13  E-value=0.55  Score=37.69  Aligned_cols=30  Identities=33%  Similarity=0.417  Sum_probs=27.1

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcC
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDI  216 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~  216 (371)
                      -|+|+|+|+.|+.|+..|..+|. +|.+++.
T Consensus         5 DviVIG~GpaGl~aA~~aa~~G~-kV~viE~   34 (235)
T d1h6va1           5 DLIIIGGGSGGLAAAKEAAKFDK-KVMVLDF   34 (235)
T ss_dssp             EEEEECCSHHHHHHHHHHGGGCC-CEEEECC
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-eEEEEec
Confidence            47899999999999999999999 8999984

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=82.04  E-value=1.4  Score=32.77  Aligned_cols=39  Identities=26%  Similarity=0.335  Sum_probs=31.9

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhH
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEK  220 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g~-~~Vi~~~~~~~~  220 (371)
                      ..+.+|.|+|+|.+|...+..+...+. .+++.++.++++
T Consensus         4 ~~~~KI~IiGaG~vG~~~a~~l~~~~l~~el~L~Di~~~~   43 (148)
T d1ldna1           4 NGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESK   43 (148)
T ss_dssp             TTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             CCCCeEEEECcCHHHHHHHHHHHhcCCCceEEEEeecccc
Confidence            456789999999999998888877664 579999988776

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=81.85  E-value=0.57  Score=39.75  Aligned_cols=32  Identities=28%  Similarity=0.424  Sum_probs=28.0

Q ss_pred             CeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457          185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDIN  217 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~  217 (371)
                      --|+|+|+|..|+.|+.-|...|+ +|++++..
T Consensus        20 ~DVvVIGaG~aGl~AA~~aa~~G~-~V~vlEK~   51 (317)
T d1qo8a2          20 TQVLVVGAGSAGFNASLAAKKAGA-NVILVDKA   51 (317)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHTC-CEEEECSS
T ss_pred             cCEEEECcCHHHHHHHHHHHHCCC-cEEEEeCC
Confidence            358999999999999988888999 89999864

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=81.76  E-value=0.98  Score=31.97  Aligned_cols=35  Identities=9%  Similarity=-0.054  Sum_probs=26.7

Q ss_pred             CCCeEEEEcCChHHHHHHHHHHH---cCCCeEEEEcCCh
Q 017457          183 VGSTVAIFGLGAVGLAVAEGARL---NRASKIIGVDINP  218 (371)
Q Consensus       183 ~g~~VLI~G~g~~G~~ai~la~~---~g~~~Vi~~~~~~  218 (371)
                      .+++++|+|+|.+|.=.+.++..   +|. +|.++.+++
T Consensus        17 ~p~~v~IiGgG~ig~E~A~~l~~~~~~g~-~Vtli~~~~   54 (117)
T d1feca2          17 APKRALCVGGGYISIEFAGIFNAYKARGG-QVDLAYRGD   54 (117)
T ss_dssp             CCSEEEEECSSHHHHHHHHHHHHHSCTTC-EEEEEESSS
T ss_pred             cCCeEEEECCChHHHHHHHHhHhhccccc-ccceecccc
Confidence            35899999999999877776544   377 888887643

>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Indolethylamine N-methyltransferase, INMT
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.51  E-value=0.18  Score=41.42  Aligned_cols=45  Identities=22%  Similarity=0.082  Sum_probs=32.2

Q ss_pred             CCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 017457          180 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK  226 (371)
Q Consensus       180 ~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~  226 (371)
                      ...+|++||=+|+|. |..+..+++. +..+|++++-++..++.+++
T Consensus        48 ~~~~g~~vLDlGcG~-G~~~~~~~~~-~~~~v~giD~S~~~i~~a~~   92 (257)
T d2a14a1          48 GGLQGDTLIDIGSGP-TIYQVLAACD-SFQDITLSDFTDRNREELEK   92 (257)
T ss_dssp             TSCCEEEEEESSCTT-CCGGGTTGGG-TEEEEEEEESCHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCC-CHhHHHHhcc-ccCcEEEecCCHHHHHHHHH
Confidence            456788888889865 5444445444 44489999999998888765

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=81.49  E-value=1.8  Score=35.58  Aligned_cols=29  Identities=21%  Similarity=0.342  Sum_probs=24.6

Q ss_pred             EEEEcC-ChHHHHHHHHHHHcCCCeEEEEc
Q 017457          187 VAIFGL-GAVGLAVAEGARLNRASKIIGVD  215 (371)
Q Consensus       187 VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~  215 (371)
                      |||+|+ |-+|...+..+...|..+|++++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d   31 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVD   31 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEE
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEE
Confidence            799998 99999998888888975788875

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=81.48  E-value=1.5  Score=32.52  Aligned_cols=40  Identities=25%  Similarity=0.276  Sum_probs=31.7

Q ss_pred             CCCCeEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHH
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKF  221 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la~~~g-~~~Vi~~~~~~~~~  221 (371)
                      .+..+|.|+|+|.+|...+..+...| +..++.++.++++.
T Consensus         3 ~~~~KI~IIGaG~VG~~~A~~l~~~~~~~elvL~D~~~~~~   43 (146)
T d1ez4a1           3 PNHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRT   43 (146)
T ss_dssp             TTBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHhcCCCcEEEEeecccchh
Confidence            34568999999999999887777766 35899999887653

>d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=81.25  E-value=7.8  Score=29.10  Aligned_cols=100  Identities=19%  Similarity=0.203  Sum_probs=58.3

Q ss_pred             eEEEEcCChHHHHHHHHHHHc-CCCeEEEEc-C--ChhHHHHHHHhCc-------c-------eEEcCCCC---CCccHH
Q 017457          186 TVAIFGLGAVGLAVAEGARLN-RASKIIGVD-I--NPEKFEIGKKFGI-------T-------DFINPATC---GDKTVS  244 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~-g~~~Vi~~~-~--~~~~~~~~~~lga-------~-------~v~~~~~~---~~~~~~  244 (371)
                      +|.|.|-|-+|.++...+... .. .|+++- .  +.+.+..+-+...       +       .+++.+..   ...+..
T Consensus         2 kigINGfGRIGR~v~R~~~~~~~~-~iv~INd~~~d~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~i~~~~~p~   80 (166)
T d2b4ro1           2 KLGINGFGRIGRLVFRAAFGRKDI-EVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPS   80 (166)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCSSE-EEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEESSCEEEEECCSSGG
T ss_pred             eEEEECCCHHHHHHHHHHhhCCCc-EEEEECCCCCChHHhhhhhhcccccccceeeeccCCceEEecCcEEEEEeCCChH
Confidence            578889999999999888654 45 566653 2  3456666644211       0       01111000   001111


Q ss_pred             HHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccC
Q 017457          245 QVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM  289 (371)
Q Consensus       245 ~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  289 (371)
                       .+ .|..-++|+|+||+|--...+.+..++..+ ..-|.++.+.
T Consensus        81 -~i-~W~~~gvdiViEcTG~f~~~~~~~~hl~~g-akkViiSAP~  122 (166)
T d2b4ro1          81 -QI-PWGKCQVDVVCESTGVFLTKELASSHLKGG-AKKVIMSAPP  122 (166)
T ss_dssp             -GC-CHHHHTCSEEEECSSSCCSHHHHTHHHHTT-CSEEEESSCC
T ss_pred             -Hc-cccccCCCEEEEecccccchhhhhhhhccC-CCEEEEeccc
Confidence             11 111118999999999876677888899886 6666666543

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=81.04  E-value=10  Score=31.62  Aligned_cols=57  Identities=25%  Similarity=0.205  Sum_probs=40.1

Q ss_pred             HHHcCCCCCCeEEEE-cCChHHHHHHHHHHHcCCCeEEEEc---CChhHHHHHHHhCcceEE
Q 017457          176 WKVAGVEVGSTVAIF-GLGAVGLAVAEGARLNRASKIIGVD---INPEKFEIGKKFGITDFI  233 (371)
Q Consensus       176 ~~~~~~~~g~~VLI~-G~g~~G~~ai~la~~~g~~~Vi~~~---~~~~~~~~~~~lga~~v~  233 (371)
                      .+...++++...+|. .+|..|.+.+..++.+|. +.+++.   .++.+.+.++.+|++.++
T Consensus        56 ~~~g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~-~~~iv~p~~~~~~k~~~i~~~Ga~vi~  116 (320)
T d1z7wa1          56 EKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGY-KLIITMPASMSTERRIILLAFGVELVL  116 (320)
T ss_dssp             HHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTC-EEEEEEETTSCHHHHHHHHHTTCEEEE
T ss_pred             HHcCCCCCCCceEEeeCCchHHHHHHHHHHhhcc-ceEEeehhhhhhhhhhhhhccCcceEE
Confidence            344556666555555 559999999999999999 444443   345678888888886543

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=80.98  E-value=0.75  Score=39.27  Aligned_cols=34  Identities=24%  Similarity=0.365  Sum_probs=26.1

Q ss_pred             CeEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCCh
Q 017457          185 STVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINP  218 (371)
Q Consensus       185 ~~VLI~G~g~~G~~ai~la~~~g~-~~Vi~~~~~~  218 (371)
                      ++|+|+|||..|++++..++..|. .+|++.++++
T Consensus         5 KrVaIIGaG~sGl~~A~~L~~~~~~~~v~vfEk~~   39 (335)
T d2gv8a1           5 RKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRG   39 (335)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred             CeEEEECcCHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence            689999999999988765554442 2899998764

>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Fumarate reductase
species: Wolinella succinogenes [TaxId: 844]

Probab=80.98  E-value=0.63  Score=39.57  Aligned_cols=31  Identities=23%  Similarity=0.323  Sum_probs=27.8

Q ss_pred             EEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          187 VAIFGLGAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       187 VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      |||+|+|..|+.|+.-|...|+ +|++++..+
T Consensus         8 VvVIG~G~AGl~AAl~aa~~G~-~V~liEK~~   38 (336)
T d2bs2a2           8 SLVIGGGLAGLRAAVATQQKGL-STIVLSLIP   38 (336)
T ss_dssp             EEEECCSHHHHHHHHHHHTTTC-CEEEECSSC
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-CEEEEecCC
Confidence            8999999999999999999999 899998654

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=80.95  E-value=1.2  Score=33.26  Aligned_cols=47  Identities=15%  Similarity=0.007  Sum_probs=37.0

Q ss_pred             hhhHHHHHHHcCCCCCCeEEEE--cCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          169 STGVGAAWKVAGVEVGSTVAIF--GLGAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       169 ~ta~~~l~~~~~~~~g~~VLI~--G~g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      .|....+  ..+..+++.++|+  |+|-+|+-+++.+..+|. +|+++.+.+
T Consensus        26 ~t~~d~l--~~~~~~~~~vvi~d~ggg~ig~e~A~~la~~G~-~Vtlv~~~~   74 (156)
T d1djqa2          26 LTPEQVM--DGKKKIGKRVVILNADTYFMAPSLAEKLATAGH-EVTIVSGVH   74 (156)
T ss_dssp             ECHHHHH--HTCSCCCSEEEEEECCCSSHHHHHHHHHHHTTC-EEEEEESSC
T ss_pred             ECHHHHh--cCccccCCceEEEecCCChHHHHHHHHHHHcCC-eEEEEecCC
Confidence            3444432  3567788889888  779999999999999999 999998754

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=80.89  E-value=2  Score=33.16  Aligned_cols=70  Identities=10%  Similarity=0.068  Sum_probs=45.6

Q ss_pred             CCCCCeEEEEc--CChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc---eEEcCCCCCCccHHHHHHHhh
Q 017457          181 VEVGSTVAIFG--LGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIKEMT  251 (371)
Q Consensus       181 ~~~g~~VLI~G--~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~---~v~~~~~~~~~~~~~~i~~~~  251 (371)
                      ...|.+||=+.  .|.+|+-|    ...|+++|+.++.+.+..+.+++    ++..   .++.      .+..+.+..+.
T Consensus        39 ~~~~~~vLDlfaGsG~~g~ea----~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~------~D~~~~l~~~~  108 (182)
T d2fhpa1          39 YFDGGMALDLYSGSGGLAIEA----VSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRK------MDANRALEQFY  108 (182)
T ss_dssp             CCSSCEEEETTCTTCHHHHHH----HHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEE------SCHHHHHHHHH
T ss_pred             hcCCCEEEEccccccccccee----eecchhHHHHHHHHHHHHHHHHHHhhhhhccccccccc------ccchhhhhhhc
Confidence            45788888774  37777643    34788899999999988877654    4432   2332      34445555443


Q ss_pred             -CC-CcCEEEE
Q 017457          252 -DG-GADYCFE  260 (371)
Q Consensus       252 -~g-g~d~vid  260 (371)
                       .+ .||+||-
T Consensus       109 ~~~~~fDlIfl  119 (182)
T d2fhpa1         109 EEKLQFDLVLL  119 (182)
T ss_dssp             HTTCCEEEEEE
T ss_pred             ccCCCcceEEe
Confidence             23 7999983

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=80.67  E-value=1.2  Score=33.00  Aligned_cols=35  Identities=23%  Similarity=0.317  Sum_probs=29.2

Q ss_pred             eEEEEcC-ChHHHHHHHHHHHcCC-CeEEEEcCChhH
Q 017457          186 TVAIFGL-GAVGLAVAEGARLNRA-SKIIGVDINPEK  220 (371)
Q Consensus       186 ~VLI~G~-g~~G~~ai~la~~~g~-~~Vi~~~~~~~~  220 (371)
                      +|.|+|+ |.+|...+.++...|. +.++.++.++.+
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~   38 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTP   38 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHH
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccc
Confidence            6889997 9999999988888875 688888876654

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=80.61  E-value=0.68  Score=39.24  Aligned_cols=32  Identities=44%  Similarity=0.576  Sum_probs=28.0

Q ss_pred             eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457          186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINP  218 (371)
Q Consensus       186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~  218 (371)
                      -|+|+|+|..|+.++..|...|+ +|+++++.+
T Consensus        25 DVvVIG~G~aGl~aA~~la~~G~-~V~llEk~~   56 (322)
T d1d4ca2          25 DVVIIGSGGAGLAAAVSARDAGA-KVILLEKEP   56 (322)
T ss_dssp             SEEEECSSHHHHHHHHHHHTTTC-CEEEECSSS
T ss_pred             eEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence            48999999999999888888999 899998643

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=80.40  E-value=3.2  Score=33.23  Aligned_cols=94  Identities=7%  Similarity=-0.042  Sum_probs=56.0

Q ss_pred             CeEEEEcCCh----HHHHHHHHHHHc--CCCeEE-EEcCChhHHHH-HHHhCcceEEcCCCCCCccHHHHHHHhhCCCcC
Q 017457          185 STVAIFGLGA----VGLAVAEGARLN--RASKII-GVDINPEKFEI-GKKFGITDFINPATCGDKTVSQVIKEMTDGGAD  256 (371)
Q Consensus       185 ~~VLI~G~g~----~G~~ai~la~~~--g~~~Vi-~~~~~~~~~~~-~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d  256 (371)
                      =+|.|+|.|.    ++...+...+..  ++ +++ +.+++.++.+. +++++....-.++     ++.+.+.   ...+|
T Consensus        17 irvgiIG~G~~~~~~~~~h~~ai~~~~~~~-~ivav~d~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~---~~~iD   87 (237)
T d2nvwa1          17 IRVGFVGLTSGKSWVAKTHFLAIQQLSSQF-QIVALYNPTLKSSLQTIEQLQLKHATGFD-----SLESFAQ---YKDID   87 (237)
T ss_dssp             EEEEEECCCSTTSHHHHTHHHHHHHTTTTE-EEEEEECSCHHHHHHHHHHTTCTTCEEES-----CHHHHHH---CTTCS
T ss_pred             eEEEEEecCccccHHHHHHHHHHHhcCCCe-EEEEEEcCCHHHHHHHHHhcccccceeec-----chhhccc---ccccc
Confidence            3688999865    444444444443  56 666 45666666554 5667654322122     3333322   23799


Q ss_pred             EEEECCCChHHHHHHHHHhhcCC----ceEEEECc
Q 017457          257 YCFECIGLTSVMNDAFNSSREGW----GKTVILGV  287 (371)
Q Consensus       257 ~vid~~g~~~~~~~~~~~l~~~~----G~~v~~g~  287 (371)
                      +|+.++......+.+..+|..+.    +.=+++.-
T Consensus        88 ~V~i~tp~~~h~~~~~~al~aG~~~~~~k~V~~EK  122 (237)
T d2nvwa1          88 MIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEW  122 (237)
T ss_dssp             EEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEES
T ss_pred             eeeccCCCcchhhHHHHHHHhcccccCCceEEEec
Confidence            99999998887888888887630    23466654

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=80.25  E-value=8.5  Score=32.62  Aligned_cols=103  Identities=17%  Similarity=0.150  Sum_probs=66.0

Q ss_pred             CCCCeEEEEcCChHHHHHHHHH-HHcCCCeEEEEcCChhHHHHH-HHh----CcceEEcCCCCCCccHHHHHHHhhCCCc
Q 017457          182 EVGSTVAIFGLGAVGLAVAEGA-RLNRASKIIGVDINPEKFEIG-KKF----GITDFINPATCGDKTVSQVIKEMTDGGA  255 (371)
Q Consensus       182 ~~g~~VLI~G~g~~G~~ai~la-~~~g~~~Vi~~~~~~~~~~~~-~~l----ga~~v~~~~~~~~~~~~~~i~~~~~gg~  255 (371)
                      +..+++.|+|+|..+.+.++.. ..++.++|.+.++++++.+.+ +++    |..... .     .+..+.++     +.
T Consensus       126 ~da~~l~iiG~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~-~-----~s~~eav~-----~A  194 (340)
T d1x7da_         126 PNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRR-A-----SSVAEAVK-----GV  194 (340)
T ss_dssp             TTCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEE-C-----SSHHHHHT-----TC
T ss_pred             cCCceEEEEcccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCcee-c-----CCHHHHHh-----cC
Confidence            4567899999999998877654 567898999999998876543 333    332222 1     23333332     68


Q ss_pred             CEEEECCCCh---HHHHHHHHHhhcCCceEEEECccCCCCceecCHH
Q 017457          256 DYCFECIGLT---SVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI  299 (371)
Q Consensus       256 d~vid~~g~~---~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~  299 (371)
                      |+++-|+.+.   ..+.  .+.++++ -++..+|... .....++..
T Consensus       195 DIi~t~Tas~s~~Pv~~--~~~l~pG-~hI~aiGs~~-p~~~Eld~~  237 (340)
T d1x7da_         195 DIITTVTADKAYATIIT--PDMLEPG-MHLNAVGGDC-PGKTELHAD  237 (340)
T ss_dssp             SEEEECCCCSSEEEEEC--GGGCCTT-CEEEECSCCB-TTBEEECHH
T ss_pred             CceeeccccCCCCcccc--hhhcCCC-CEEeecccch-hhhhccCHH
Confidence            9999877543   1122  2357886 7888888743 334556554