Citrus Sinensis ID: 017533

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370
Protein Sequence
MKYRTSTTTIISTKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVASTDCAKKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGLESSAANASTNSRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWFIGLEVEHIDDRNMCCQTPPGNVSKKDDLLFCLLLMF
Secondary Structure (PSIPRED)
cccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHccccccccccccccHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEEEEEEcccccHHHHHHHHHHccccccccHHHcccccEEEEEEEEEcccccHHHHHHHHHHHHHcccEEEEcccccccccHHHHHHHHHHHHHcccEEEEEEcccccEEcHHHHHHHHHcccccccEEEEEEccccccccccccEEEccccccccccccccccccccEEEEcHHHHHHHHHHccccccccccHHHHHHHHHHcccEEEccccccccccccccccccccccHHcccc
Secondary Structure Prediction (SSPRO)
ccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHccEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEEEEcccccHHHHHHHHHHHccccHHHHHHHHcccEEEEEEEEcccccccHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHHHHHHHHHccccEEEEEcccEEEcHHHHHHHHHHccccccEEEEEccccccccccccEEEcccEEccccccccccccccccEEEEcHHHHHHHHHccHHHHHHcHccccHHHHHHcccEEEEcccccccccccccEEEHccccEEEEEEc
Coil and Loop (DISEMBL)
mkyrtstttiistkwipFVCLFCFALGIlfsnltwnppesdgrpslnvrRREQQVAVASTDCAKKAFQDQDVAKEVLKTrgaihdgsvesdrtLDKTIGQLQMELAAsrsgrempglessaanastnsrrpkVFVVIGINTafssrkrrdsvrdtwmpqgEKLIQLEREKGIIIRFMIghsatsnsildkaidsedaqhKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLATTlsrhrskprvyigcmksgpvlsqknvkyhepeywkfgeegnkyfrHATGQIYAISKDLATYIsinqpilhkfanedvslgswfiglevehiddrnmccqtppgnvskkdDLLFCLLLMF
Flexible Loop (DISEMBL)
mkyrtstttiistkwipfVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVASTdcakkafqdqdvAKEVLktrgaihdgsvesdrtldKTIGQLQMELAasrsgrempGLESsaanastnsrrpkvfvvigintafssrkrrdsvrdtwmpqgekliQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLattlsrhrskprvyigcmksgpvlsqknvKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWFIGLEVEHIDDRNMCCQtppgnvskkddLLFCLLLMF
Low Complexity Region (SEG)
MKYRtstttiistKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVASTDCAKKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGLEssaanastnsRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWFIGLEVEHIDDRNMCCQTPPGNVSKKDDLLFCLLLMF
Disordered region (IsUnstruct)
******TTTIISTKWIPFVCLFCFALGILFSNLTWN***********************************************************************************************KVFVVIGINTAFS*********DTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWFIGLEVEHIDDRNMCCQTPPGNVSKKDDLLFCLLLM*
Disordered Region (DISOPRED)
***************IPFVCLFCFALGILFSNLTWN********************************************************TLDKTIGQLQMELAASRSGRE********************FVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWFIGLEVEHIDDRNMCCQTPPGNVSKKDDLLFCLLLMF
Disordered Region (DISEMBL)
********TIISTKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNV************DCAKKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELA*********************SRRPKVFVVIGINTAFS*********DTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWFIGLEVEHIDDRNMCCQTPPGNVSKKDDLLFCLLLMF
Disordered Region (DISPRO)
*********IISTKWIPFVCLFCFALGILFSNLTWNPP*******************ASTDCAKKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSG******************RPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWFIGLEVEHIDDRNMCCQTPPGNVSKKDDLLFCLLLMF
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKYRTSTTTIISTKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVASTDCAKKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGLESSAANASTNSRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWFIGLEVEHIDDRNMCCQTPPGNVSKKDDLLFCLLLMF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	370	2.2.26 [Sep-21-2011]
Q6NQB7	393	Beta-1,3-galactosyltransf	yes	no	0.908	0.854	0.686	1e-143
Q9LM60	398	Probable beta-1,3-galacto	no	no	0.927	0.861	0.629	1e-126
A8MRC7	407	Probable beta-1,3-galacto	no	no	0.943	0.857	0.592	1e-121
Q9MAP8	399	Probable beta-1,3-galacto	no	no	0.916	0.849	0.596	1e-120
Q9ZV71	409	Probable beta-1,3-galacto	no	no	0.910	0.823	0.585	1e-114
Q9C809	395	Probable beta-1,3-galacto	no	no	0.889	0.832	0.592	1e-112
Q9SAA4	384	Probable beta-1,3-galacto	no	no	0.875	0.843	0.577	1e-111
Q8LEJ9	407	Probable beta-1,3-galacto	no	no	0.910	0.828	0.566	1e-110
Q94F27	338	Probable beta-1,3-galacto	no	no	0.678	0.742	0.469	1e-66
Q5XEZ1	346	Probable beta-1,3-galacto	no	no	0.681	0.728	0.432	5e-59

>sp|Q6NQB7|B3GT7_ARATH Beta-1,3-galactosyltransferase 7 OS=Arabidopsis thaliana GN=B3GALT7 PE=2 SV=1

 Score =  509 bits (1310), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 248/361 (68%), Positives = 293/361 (81%), Gaps = 25/361 (6%)

Query: 1   MKYRTSTTTIISTKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVAST 60
           MK++ S   +IS KW+PF+C+  FALG +F++ +W P    G   ++   R+ ++ + S 
Sbjct: 1   MKHKVSKR-VISLKWVPFLCISFFALGAIFTSRSWEPSSDSGSQLISQHHRDHELQIVSD 59

Query: 61  DCA--KKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGLE 118
           DCA  KKA Q++DV  EVL+T  AI D     DR+LDK++  L    +++RS +EM    
Sbjct: 60  DCAHNKKATQEKDVTGEVLRTHEAIQD-----DRSLDKSVSTL----SSTRSSQEM---- 106

Query: 119 SSAANASTNSRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMI 178
               + S  + R KVF+V+GINTAFSSRKRRDSVR+TWMPQGEKL +LE+EKGI+I+FMI
Sbjct: 107 ---VDGSETNPRKKVFMVMGINTAFSSRKRRDSVRETWMPQGEKLERLEQEKGIVIKFMI 163

Query: 179 GHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVD 238
           GHSATSNSILD+AIDSEDAQHKDFLRLEH+EGYHELSAKTKIFFSTAVAKWDA+FY+KVD
Sbjct: 164 GHSATSNSILDRAIDSEDAQHKDFLRLEHVEGYHELSAKTKIFFSTAVAKWDAEFYIKVD 223

Query: 239 DDVHVNLGMLATTLSRHRSKPRVYIGCMKSGPVLSQ------KNVKYHEPEYWKFGEEGN 292
           DDVHVNLGMLA+TL+RHRSKPRVYIGCMKSGPVL+Q      + VKYHEPEYWKFGE+GN
Sbjct: 224 DDVHVNLGMLASTLARHRSKPRVYIGCMKSGPVLAQNLLNCFRTVKYHEPEYWKFGEDGN 283

Query: 293 KYFRHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWFIGLEVEHIDDRNMCCQTP 352
           KYFRHATGQIYAISKDLA YISINQPILHK+ANEDVSLGSWFIGLEVEHIDDRN CC TP
Sbjct: 284 KYFRHATGQIYAISKDLANYISINQPILHKYANEDVSLGSWFIGLEVEHIDDRNFCCGTP 343

Query: 353 P 353
           P
Sbjct: 344 P 344

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -

>sp|Q9LM60|B3GT5_ARATH Probable beta-1,3-galactosyltransferase 5 OS=Arabidopsis thaliana GN=B3GALT5 PE=2 SV=1

 Score =  452 bits (1162), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 224/356 (62%), Positives = 280/356 (78%), Gaps = 13/356 (3%)

Query: 1   MKYRTSTTTIISTKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVAST 60
           MK+    +  ++  W+P +C+ CF LG +F++   +     G   +   RR+Q++ + + 
Sbjct: 1   MKHNNKVSKRLTMTWVPLLCISCFFLGAIFTSKLRSASSDSGSQLILQHRRDQELKIVTQ 60

Query: 61  DCA--KKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGLE 118
           D A  KK  QD DV +EVLKT  AI         +LDK++  LQ +L+A+ S +++  + 
Sbjct: 61  DYAHEKKKSQDNDVMEEVLKTHKAI--------ESLDKSVSMLQKQLSATHSPQQIVNV- 111

Query: 119 SSAANAST-NSRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFM 177
            SA N+ST  +++ KVF+VIGINTAFSSRKRRDS+R+TWMPQGEKL +LE+EKGI+++FM
Sbjct: 112 -SATNSSTEGNQKNKVFMVIGINTAFSSRKRRDSLRETWMPQGEKLEKLEKEKGIVVKFM 170

Query: 178 IGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKV 237
           IGHS+T NS+LDK IDSEDAQ+ DF RL+H+EGY+ LSAKTK FFS+AVAKWDA+FYVK+
Sbjct: 171 IGHSSTPNSMLDKEIDSEDAQYNDFFRLDHVEGYYNLSAKTKSFFSSAVAKWDAEFYVKI 230

Query: 238 DDDVHVNLGMLATTLSRHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKYFRH 297
           DDDVHVNLG LA+TL+ HRSKPRVYIGCMKSGPVL++K  KY EPE+WKFGEEGNKYFRH
Sbjct: 231 DDDVHVNLGTLASTLASHRSKPRVYIGCMKSGPVLTKKTAKYREPEFWKFGEEGNKYFRH 290

Query: 298 ATGQIYAISKDLATYISINQPILHKFANEDVSLGSWFIGLEVEHIDDRNMCCQTPP 353
           ATGQIYAISKDLATYIS NQPILHK+ANEDV+LGSWFIGLEVE IDDRN CC TPP
Sbjct: 291 ATGQIYAISKDLATYISNNQPILHKYANEDVTLGSWFIGLEVEQIDDRNFCCGTPP 346

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|A8MRC7|B3GT2_ARATH Probable beta-1,3-galactosyltransferase 2 OS=Arabidopsis thaliana GN=B3GALT2 PE=2 SV=1

 Score =  435 bits (1118), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 212/358 (59%), Positives = 268/358 (74%), Gaps = 9/358 (2%)

Query: 1   MKYRTSTTTIISTKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVAST 60
           +K   S+ + +S KW   +CL  F +G+ F+N  WN PES G    +V   E+ + + S 
Sbjct: 5   IKGEYSSRSFVSRKWTILLCLGSFCVGMFFTNRMWNIPESKGMSHPSVTEAER-LKLVSE 63

Query: 61  DCAKKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGLESS 120
            C  KA   ++V ++     G + +  + + +TLDKTI  L+MELAA+RS +E   L++ 
Sbjct: 64  GCNPKALYQKEVKRDPQALFGEVANTHI-ALQTLDKTISSLEMELAAARSVQE--SLQNG 120

Query: 121 AA-NASTNSRRP----KVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIR 175
           A  +     ++P    +  +V+GINTAFSSRKRRDS+R TWMPQGEK  +LE EKGIIIR
Sbjct: 121 APLSDDMGKKQPQEQRRFLMVVGINTAFSSRKRRDSIRATWMPQGEKRKRLEEEKGIIIR 180

Query: 176 FMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYV 235
           F+IGHSAT+  ILD+AI++ED +H DFLRL+H+EGY ELS KTK +FSTA + WDADFYV
Sbjct: 181 FVIGHSATTGGILDRAIEAEDRKHGDFLRLDHVEGYLELSGKTKTYFSTAFSMWDADFYV 240

Query: 236 KVDDDVHVNLGMLATTLSRHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKYF 295
           KVDDDVHVN+  L  TL RHR KPRVYIGCMKSGPVLSQK V+YHEPEYWKFGE GNKYF
Sbjct: 241 KVDDDVHVNIATLGETLVRHRKKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGENGNKYF 300

Query: 296 RHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWFIGLEVEHIDDRNMCCQTPP 353
           RHATGQ+YAIS+DLA+YISINQ +LHK+ANEDVSLG+WFIG++V+HIDDR +CC TPP
Sbjct: 301 RHATGQLYAISRDLASYISINQHVLHKYANEDVSLGAWFIGIDVKHIDDRRLCCGTPP 358

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9MAP8|B3GT6_ARATH Probable beta-1,3-galactosyltransferase 6 OS=Arabidopsis thaliana GN=B3GALT6 PE=2 SV=1

 Score =  431 bits (1108), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 213/357 (59%), Positives = 269/357 (75%), Gaps = 18/357 (5%)

Query: 2   KYRTSTTTIISTKWIPFVCLFCFALGILFSNLTWNPPES-DGRPSLNVRRREQQVAVAS- 59
           +Y+ S T+ +S +W+  +C+  F LG+L  N      E+ DG    +  + +Q  ++   
Sbjct: 5   RYQKSATSGVSARWVFVLCISSFLLGVLVVNRLLASFETVDGIERASPEQNDQSRSLNPL 64

Query: 60  TDCAKKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGLES 119
            DC  K   + D+   V  T   I        +TLDKTI  L++ELA +R+ R   G + 
Sbjct: 65  VDCESK---EGDILSRVSHTHDVI--------KTLDKTISSLEVELATARAARS-DGRDG 112

Query: 120 SAANAST----NSRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIR 175
           S A A T    +  RP++F V+GI TAFSSRKRRDS+R TW+P+G++L +LE EKGII+R
Sbjct: 113 SPAVAKTVADQSKIRPRMFFVMGIMTAFSSRKRRDSIRGTWLPKGDELKRLETEKGIIMR 172

Query: 176 FMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYV 235
           F+IGHS++   +LD  I++E+ QHKDF RL HIEGYHELS+KT+I+FS+AVAKWDADFY+
Sbjct: 173 FVIGHSSSPGGVLDHTIEAEEEQHKDFFRLNHIEGYHELSSKTQIYFSSAVAKWDADFYI 232

Query: 236 KVDDDVHVNLGMLATTLSRHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKYF 295
           KVDDDVHVNLGML +TL+RHRSKPRVYIGCMKSGPVL+QK VKYHEPEYWKFGEEGNKYF
Sbjct: 233 KVDDDVHVNLGMLGSTLARHRSKPRVYIGCMKSGPVLAQKGVKYHEPEYWKFGEEGNKYF 292

Query: 296 RHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWFIGLEVEHIDDRNMCCQTP 352
           RHATGQIYAISKDLATYIS+N+ +LHK+ANEDVSLGSWFIGL+VEHIDDR++CC TP
Sbjct: 293 RHATGQIYAISKDLATYISVNRQLLHKYANEDVSLGSWFIGLDVEHIDDRSLCCGTP 349

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9ZV71|B3GT3_ARATH Probable beta-1,3-galactosyltransferase 3 OS=Arabidopsis thaliana GN=B3GALT3 PE=2 SV=1

 Score =  413 bits (1061), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 208/355 (58%), Positives = 258/355 (72%), Gaps = 18/355 (5%)

Query: 9   TIISTKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVASTDCAKKAFQ 68
           +++S KW   +C   F  GILF++  W  PES   P  +V    +++ + S  C  K   
Sbjct: 14  SLVSKKWTFLLCFGSFCFGILFTDRMWIIPESKDMPRPSVSTEAERLKLISEGCDPKTLY 73

Query: 69  DQDVAK-------EVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGLESSA 121
            ++V +       EV KT  AI        +TLDKTI  L+MELAA+RS +E     +  
Sbjct: 74  QKEVNRDPQALFGEVSKTHNAI--------QTLDKTISSLEMELAAARSAQESLVNGAPI 125

Query: 122 ANASTNSRRP---KVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMI 178
           +N     + P   +  +V+GINTAFSSRKRRDSVR TWMP GEK  +LE EKGIIIRF+I
Sbjct: 126 SNDMEKKQLPGKRRYLMVVGINTAFSSRKRRDSVRTTWMPSGEKRKKLEEEKGIIIRFVI 185

Query: 179 GHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVD 238
           GHSAT+  ILD++I++ED +H DFLRL+H+EGY ELS KTK +FSTAV+KWDA+FYVKVD
Sbjct: 186 GHSATAGGILDRSIEAEDKKHGDFLRLDHVEGYLELSGKTKTYFSTAVSKWDAEFYVKVD 245

Query: 239 DDVHVNLGMLATTLSRHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKYFRHA 298
           DDVHVN+  L  TL RHR K RVY+GCMKSGPVLSQK V+YHEPEYWKFGE GNKYFRHA
Sbjct: 246 DDVHVNIATLGETLVRHRKKHRVYLGCMKSGPVLSQKGVRYHEPEYWKFGENGNKYFRHA 305

Query: 299 TGQIYAISKDLATYISINQPILHKFANEDVSLGSWFIGLEVEHIDDRNMCCQTPP 353
           TGQ+YAIS+DLA+YIS+NQ +LHK+ANEDV+LG+WFIGL+V HIDDR +CC TPP
Sbjct: 306 TGQLYAISRDLASYISLNQHVLHKYANEDVTLGAWFIGLDVTHIDDRRLCCGTPP 360

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9C809|B3GT8_ARATH Probable beta-1,3-galactosyltransferase 8 OS=Arabidopsis thaliana GN=B3GALT8 PE=2 SV=1

 Score =  405 bits (1041), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 208/351 (59%), Positives = 261/351 (74%), Gaps = 22/351 (6%)

Query: 12  STKWIPFVCLFCFALGILFSNLT----WNPPESDGRPSLNVRRREQQVAVASTDCAKKA- 66
           S K I  +CL  F  G LF + T    + P E D   + ++ +  +       DC +   
Sbjct: 7   SGKAIIVLCLASFLAGSLFMSRTLSRSYIPEEEDHHLTKHLSKHLE----IQKDCDEHKR 62

Query: 67  ----FQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGLESSAA 122
                + +D+  EV +T  A+        ++L++T+  L+MELAA+R+        S  +
Sbjct: 63  KLIESKSRDIIGEVSRTHQAV--------KSLERTMSTLEMELAAARTSDRSSEFWSERS 114

Query: 123 NASTNSRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSA 182
            A   SR  KVF VIGINTAFSS+KRRDSVR TWMP GEKL ++E+EKGI++RF+IGHSA
Sbjct: 115 -AKNQSRLQKVFAVIGINTAFSSKKRRDSVRQTWMPTGEKLKKIEKEKGIVVRFVIGHSA 173

Query: 183 TSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVH 242
           T   +LDKAID ED++HKDFLRL+HIEGYH+LS KT+++FSTA A +DA+FYVKVDDDVH
Sbjct: 174 TPGGVLDKAIDEEDSEHKDFLRLKHIEGYHQLSTKTRLYFSTATAMYDAEFYVKVDDDVH 233

Query: 243 VNLGMLATTLSRHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKYFRHATGQI 302
           VNLGML TTL+R++S+PR+YIGCMKSGPVLSQK VKYHEPE+WKFGEEGNKYFRHATGQI
Sbjct: 234 VNLGMLVTTLARYQSRPRIYIGCMKSGPVLSQKGVKYHEPEFWKFGEEGNKYFRHATGQI 293

Query: 303 YAISKDLATYISINQPILHKFANEDVSLGSWFIGLEVEHIDDRNMCCQTPP 353
           YAISKDLATYIS NQ ILH++ANEDVSLG+W +GLEVEH+D+R+MCC TPP
Sbjct: 294 YAISKDLATYISTNQGILHRYANEDVSLGAWMLGLEVEHVDERSMCCGTPP 344

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9SAA4|B3GT1_ARATH Probable beta-1,3-galactosyltransferase 1 OS=Arabidopsis thaliana GN=B3GALT1 PE=2 SV=2

 Score =  402 bits (1032), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 202/350 (57%), Positives = 251/350 (71%), Gaps = 26/350 (7%)

Query: 3   YRTSTTTIISTKWIPFVCLFCFALGILFSNLTWN-PPESDGRPSLNVRRREQQVAVASTD 61
           Y  +   ++S   + F+CL  F LG+ F+N  WN  PE+ G           +++++S+D
Sbjct: 9   YNFTPRNVVSRNSVFFMCLASFCLGMFFTNRMWNIVPEARGISR------LSKLSLSSSD 62

Query: 62  CAKKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGLESSA 121
           C KK                 + D    +   LDK+I  L+M+L A+R+ RE     S  
Sbjct: 63  CDKKN----------------VLDYGNNTIGILDKSISNLEMKLVAARAERESL---SGK 103

Query: 122 ANASTNSRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHS 181
            N S  +++ K F+VIGINTAFSSRKRRDSVR TWMPQGE L +LE EKGII+RF+IGHS
Sbjct: 104 FNISNEAKKRKYFMVIGINTAFSSRKRRDSVRSTWMPQGENLKKLEEEKGIIVRFVIGHS 163

Query: 182 ATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDV 241
             S+ ILDKAI++E+  H DFLRLEH EGY +LSAKTK FF+TAV+ WDA+FY+KVDDDV
Sbjct: 164 VLSHGILDKAIEAEEKTHGDFLRLEHTEGYMKLSAKTKTFFATAVSLWDAEFYIKVDDDV 223

Query: 242 HVNLGMLATTLSRHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKYFRHATGQ 301
           HVNL  L   LS H++KPRVY+GCMKSGPVL++K+VKYHEPEYWKFGE GNKYFRHATGQ
Sbjct: 224 HVNLASLKKALSAHQNKPRVYVGCMKSGPVLARKSVKYHEPEYWKFGEVGNKYFRHATGQ 283

Query: 302 IYAISKDLATYISINQPILHKFANEDVSLGSWFIGLEVEHIDDRNMCCQT 351
            YAISKDLATYI INQ +LHK+ANEDVSLGSWFIGL VEH+D++ +CC T
Sbjct: 284 FYAISKDLATYILINQDLLHKYANEDVSLGSWFIGLNVEHVDEKRLCCST 333

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q8LEJ9|B3GT4_ARATH Probable beta-1,3-galactosyltransferase 4 OS=Arabidopsis thaliana GN=B3GALT4 PE=1 SV=1

 Score =  397 bits (1021), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 201/355 (56%), Positives = 265/355 (74%), Gaps = 18/355 (5%)

Query: 5   TSTTTIISTKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVASTDC-- 62
           +++ + +S KW  F+C+  F  GILFS+  W  PES+   S +    ++++ + S DC  
Sbjct: 13  SASKSFVSKKWTLFLCIGFFCAGILFSDRMWPEPESN-VVSRDTVASDERLRLESEDCDS 71

Query: 63  AKKAF--QDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGLESS 120
           +KK    + +D+  +V K+  AI        +TLDKTI +L+ ELA +R+ +E     S 
Sbjct: 72  SKKGLKRESKDILGDVYKSPDAI--------QTLDKTISKLETELADARAAQESIMNGSP 123

Query: 121 AAN----ASTNSRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRF 176
            ++      T ++R K  +V+G+NTAFSSRKRRDSVR TWMP GE+  +LE EKGI++RF
Sbjct: 124 VSDDFKLPETVTKR-KYLMVVGVNTAFSSRKRRDSVRATWMPPGEERKKLEEEKGIVMRF 182

Query: 177 MIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVK 236
           +IGHS+T   ILD+AI +E+++H DFLRL+H+EGY ELSAKTK +F+TA A WDADFYVK
Sbjct: 183 VIGHSSTPGGILDRAIQAEESKHGDFLRLDHVEGYLELSAKTKTYFTTAFAMWDADFYVK 242

Query: 237 VDDDVHVNLGMLATTLSRHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKYFR 296
           VDDDVHVN+  L   L+R+R KPRVYIGCMKSGPVL+QK V+YHEPEYWKFGEEGNKYFR
Sbjct: 243 VDDDVHVNIATLGAELARYRMKPRVYIGCMKSGPVLAQKGVRYHEPEYWKFGEEGNKYFR 302

Query: 297 HATGQIYAISKDLATYISINQPILHKFANEDVSLGSWFIGLEVEHIDDRNMCCQT 351
           HATGQ+YAIS++LA+YISINQ +LHK+ NEDVSLGSWF+GL+VEH+DDR +CC T
Sbjct: 303 HATGQLYAISRELASYISINQNVLHKYVNEDVSLGSWFLGLDVEHVDDRRLCCGT 357

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q94F27|B3GTB_ARATH Probable beta-1,3-galactosyltransferase 11 OS=Arabidopsis thaliana GN=B3GALT11 PE=2 SV=1

 Score =  253 bits (646), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 123/262 (46%), Positives = 176/262 (67%), Gaps = 11/262 (4%)

Query: 92  RTLDKTIGQLQMELAASRSGREMPGLESSA---ANASTNSRRPKVFVVIGINTAFSSRKR 148
           R   KT+  L+MEL+++R      G  S +   A+ +   +RP   VVIGI T+  ++K+
Sbjct: 72  REQKKTLAALEMELSSARQ----EGFVSKSPKLADGTETKKRP--LVVIGIMTSLGNKKK 125

Query: 149 RDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHI 208
           RD+VR  WM  G  L +LE EKG+I RF+IG SA     +DK+ID+E++Q  DF+ L+ +
Sbjct: 126 RDAVRQAWMGTGASLKKLESEKGVIARFVIGRSANKGDSMDKSIDTENSQTDDFIILDDV 185

Query: 209 -EGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRHRSKPRVYIGCMK 267
            E   E S K K+FF+ A  +WDA FY K  D+++VN+  L TTL+ H   PR YIGCMK
Sbjct: 186 VEAPEEASKKVKLFFAYAADRWDAQFYAKAIDNIYVNIDALGTTLAAHLENPRAYIGCMK 245

Query: 268 SGPVLSQKNVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISINQPILHKFANED 327
           SG V S+ N K++EPE+WKFG++   YFRHA G++Y I+  LA ++SIN+ ILH +A++D
Sbjct: 246 SGEVFSEPNHKWYEPEWWKFGDK-KAYFRHAYGEMYVITHALARFVSINRDILHSYAHDD 304

Query: 328 VSLGSWFIGLEVEHIDDRNMCC 349
           VS GSWF+GL+V+H+D+   CC
Sbjct: 305 VSTGSWFVGLDVKHVDEGKFCC 326

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q5XEZ1|B3GT9_ARATH Probable beta-1,3-galactosyltransferase 9 OS=Arabidopsis thaliana GN=B3GALT9 PE=2 SV=1

 Score =  228 bits (581), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 113/261 (43%), Positives = 167/261 (63%), Gaps = 9/261 (3%)

Query: 92  RTLDKTIGQLQMELAASRSGREMPGLESSAANASTNSRRPKVFVVIGINTAFSSRKRRDS 151
           + L++ I + +MEL  ++S   +  L+S +++        K+  VIG+ + F S  RR++
Sbjct: 84  KDLERRIVETEMELTLAKSQGYLKNLKSGSSSG------KKLLAVIGVYSGFGSHLRRNT 137

Query: 152 VRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLE-HIEG 210
            R ++MPQG+ L +LE E+GI+IRF+IG S      LD+ ID E+   KDFL LE H E 
Sbjct: 138 FRGSYMPQGDALRKLE-ERGIVIRFVIGRSPNRGDSLDRKIDEENQARKDFLILENHEEA 196

Query: 211 YHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRHRSKPRVYIGCMKSGP 270
             EL+ K K FFS AV  WDA+FY+KVDD++ ++L  L   L   R +   YIGCMKSG 
Sbjct: 197 QEELAKKVKFFFSAAVQNWDAEFYIKVDDNIDLDLEGLIGLLESRRGQDAAYIGCMKSGE 256

Query: 271 VLSQKNVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISINQPILHKFANEDVSL 330
           V++++  K++EPE+WKFG+E   YFRHA G +  +SK LA Y++IN   L  +A +D S+
Sbjct: 257 VVAEEGGKWYEPEWWKFGDE-KSYFRHAAGSLLILSKTLAQYVNINSGSLKTYAFDDTSI 315

Query: 331 GSWFIGLEVEHIDDRNMCCQT 351
           GSW IG++  +IDD  +CC +
Sbjct: 316 GSWMIGVQATYIDDNRLCCSS 336

Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	370
255545564	396	Beta-1,3-galactosyltransferase sqv-2, pu	0.927	0.866	0.756	1e-153
224066889	390	predicted protein [Populus trichocarpa]	0.913	0.866	0.744	1e-148
356548603	397	PREDICTED: beta-1,3-galactosyltransferas	0.924	0.861	0.727	1e-147
225459437	397	PREDICTED: beta-1,3-galactosyltransferas	0.924	0.861	0.723	1e-147
356509466	394	PREDICTED: beta-1,3-galactosyltransferas	0.924	0.868	0.727	1e-146
356551604	400	PREDICTED: beta-1,3-galactosyltransferas	0.932	0.862	0.727	1e-146
297842561	395	galactosyltransferase family protein [Ar	0.929	0.870	0.698	1e-145
224082202	397	predicted protein [Populus trichocarpa]	0.916	0.853	0.731	1e-144
225438287	397	PREDICTED: beta-1,3-galactosyltransferas	0.927	0.863	0.698	1e-144
357461703	395	Avr9 elicitor response protein [Medicago	0.927	0.868	0.702	1e-143

>gi|255545564|ref|XP_002513842.1| Beta-1,3-galactosyltransferase sqv-2, putative [Ricinus communis] gi|223546928|gb|EEF48425.1| Beta-1,3-galactosyltransferase sqv-2, putative [Ricinus communis]

 Score =  549 bits (1414), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 270/357 (75%), Positives = 295/357 (82%), Gaps = 14/357 (3%)

Query: 1   MKYRTSTTTIISTKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVAST 60
           MK R S    +S KWIPF+C+F F LGILFS   W+P ES+G+  +   R EQ++ + S 
Sbjct: 1   MKARASAK--VSVKWIPFICVFSFVLGILFSIRAWDPSESNGQQLIAQHRHEQELQLVSE 58

Query: 61  DCA--KKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREM--PG 116
           D    KK   D+DV  EVLKT  AI        ++LDK+I  LQME+AASRS +EM   G
Sbjct: 59  DSTSQKKLSNDKDVMGEVLKTHEAI--------QSLDKSIAMLQMEIAASRSSQEMNLDG 110

Query: 117 LESSAANASTNSRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRF 176
             S          R KVF+VIGINTAFSSRKRRDSVR+TWMPQGEKL+QLEREKGIIIRF
Sbjct: 111 ASSVVTPHLEGPPRQKVFMVIGINTAFSSRKRRDSVRETWMPQGEKLVQLEREKGIIIRF 170

Query: 177 MIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVK 236
           MIGHSATSNSILD+AIDSEDAQHKDFLRLEH+EGYHELSAKTKIFFSTAVAKWDA+FY+K
Sbjct: 171 MIGHSATSNSILDRAIDSEDAQHKDFLRLEHVEGYHELSAKTKIFFSTAVAKWDAEFYIK 230

Query: 237 VDDDVHVNLGMLATTLSRHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKYFR 296
           VDDDVHVNLGMLA TL+RHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKYFR
Sbjct: 231 VDDDVHVNLGMLAATLARHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKYFR 290

Query: 297 HATGQIYAISKDLATYISINQPILHKFANEDVSLGSWFIGLEVEHIDDRNMCCQTPP 353
           HATGQIYAISKDLATYISINQPILHKFANEDVSLGSWFIGLE+EHIDDRNMCC TPP
Sbjct: 291 HATGQIYAISKDLATYISINQPILHKFANEDVSLGSWFIGLEIEHIDDRNMCCGTPP 347

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224066889|ref|XP_002302264.1| predicted protein [Populus trichocarpa] gi|222843990|gb|EEE81537.1| predicted protein [Populus trichocarpa]

 Score =  532 bits (1370), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 265/356 (74%), Positives = 298/356 (83%), Gaps = 18/356 (5%)

Query: 1   MKYRTSTTTIISTKWIPFVCLFCFALGILFSNLTWNP-PESDGRPSLNVRRREQQVAVAS 59
           MK R +T      KWIPF+C+FCFALGILFSN  W+   E +G+  L+ RR EQ++ V +
Sbjct: 1   MKGRVTTKASAPAKWIPFLCVFCFALGILFSNRLWDSSAEPNGQQLLSQRRHEQELQVIN 60

Query: 60  TDCA--KKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGL 117
            D    KK  Q++DV  EVLKT   I        ++LDK+I  LQ +LA S+S +EM  L
Sbjct: 61  GDSTTNKKLSQNKDVMDEVLKTHEVI--------QSLDKSIAVLQTQLA-SKSSQEM-SL 110

Query: 118 ESSAANASTNSRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFM 177
           +SSA        R KVF+VIGINTAFSSRKRRDSVR+TWMPQGEKL+QLEREKGII+RFM
Sbjct: 111 KSSAPVP-----RQKVFMVIGINTAFSSRKRRDSVRETWMPQGEKLVQLEREKGIIVRFM 165

Query: 178 IGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKV 237
           IGHSATSNSILD+AIDSEDAQHKDFLRLEH+EGYHELSAKTKIFFSTAVAKWDA+FYVKV
Sbjct: 166 IGHSATSNSILDRAIDSEDAQHKDFLRLEHVEGYHELSAKTKIFFSTAVAKWDAEFYVKV 225

Query: 238 DDDVHVNLGMLATTLSRHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKYFRH 297
           DDDVHVNLGMLA+TL+RHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKYFRH
Sbjct: 226 DDDVHVNLGMLASTLARHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKYFRH 285

Query: 298 ATGQIYAISKDLATYISINQPILHKFANEDVSLGSWFIGLEVEHIDDRNMCCQTPP 353
           ATGQIYAISK+LATYIS+NQPILHK+ANEDVSLG+WFIGLEVEHIDD +MCC TPP
Sbjct: 286 ATGQIYAISKELATYISLNQPILHKYANEDVSLGAWFIGLEVEHIDDHSMCCGTPP 341

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356548603|ref|XP_003542690.1| PREDICTED: beta-1,3-galactosyltransferase 7-like [Glycine max]

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 261/359 (72%), Positives = 296/359 (82%), Gaps = 17/359 (4%)

Query: 1   MKYRTSTTTIISTKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVAST 60
           MK R+S    IS KW+P   +F F +G+L +   W PPES+G   L+  R EQ++ V S 
Sbjct: 1   MKIRSSKK--ISAKWVPVFSVFSFLIGMLITTRIWEPPESNG-VFLSNHRHEQELQVVSG 57

Query: 61  DCA-KKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGLES 119
           DCA KK  QD DV  +V KT GAI        ++LDK +  LQMELAA+RS RE    + 
Sbjct: 58  DCAPKKPVQDNDVMNKVYKTHGAI--------QSLDKQVSMLQMELAAARSTREHKISDG 109

Query: 120 SAAN-----ASTNSRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIII 174
           SA       ++    R KVFVVIGINTAFSSRKRRDSVR+TWMPQGE+L+QLEREKGI+I
Sbjct: 110 SANTLASGVSTEGPPRKKVFVVIGINTAFSSRKRRDSVRETWMPQGEQLLQLEREKGIVI 169

Query: 175 RFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFY 234
           RFMIGHSATSNSILD+AIDSE+AQHKDFLRLEH+EGYHELSAKTKIFFSTAVAKWDADFY
Sbjct: 170 RFMIGHSATSNSILDRAIDSEEAQHKDFLRLEHVEGYHELSAKTKIFFSTAVAKWDADFY 229

Query: 235 VKVDDDVHVNLGMLATTLSRHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKY 294
           VKVDDDVHVNLG+LATTL+RHRSKPR+YIGCMKSGPVLS+++VKYHEPE+WKFGEEGNKY
Sbjct: 230 VKVDDDVHVNLGVLATTLARHRSKPRIYIGCMKSGPVLSRRDVKYHEPEFWKFGEEGNKY 289

Query: 295 FRHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWFIGLEVEHIDDRNMCCQTPP 353
           FRHATGQIYAISKDLATYISINQPILHK+ANEDVSLG+WFIGLEVEHIDDR+MCC TPP
Sbjct: 290 FRHATGQIYAISKDLATYISINQPILHKYANEDVSLGAWFIGLEVEHIDDRSMCCGTPP 348

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225459437|ref|XP_002285826.1| PREDICTED: beta-1,3-galactosyltransferase 7 [Vitis vinifera] gi|302141885|emb|CBI19088.3| unnamed protein product [Vitis vinifera]

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 259/358 (72%), Positives = 292/358 (81%), Gaps = 16/358 (4%)

Query: 1   MKYRTSTTTIISTKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVAST 60
           MK R+S     S KWIP +C+ CF  G+L +N  W PPES+ +  ++ R+ EQ++ + S 
Sbjct: 1   MKNRSSKK--FSAKWIPIICVLCFCFGMLLTNRLWTPPESNSQL-ISRRQHEQELQIISE 57

Query: 61  DCA--KKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGLE 118
            C   KK  Q++DV +EV KT  AI        + LDK+I  LQMEL+A+R+ +EM   +
Sbjct: 58  GCTTKKKPTQERDVMEEVQKTHEAI--------QYLDKSISMLQMELSATRNSQEMRSSD 109

Query: 119 SSAA---NASTNSRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIR 175
            S A   ++S  S R KVFVVIGINTAFSSRKRRDSVR TWMPQGEKL+QLEREKGI+IR
Sbjct: 110 GSGAISTSSSGVSERKKVFVVIGINTAFSSRKRRDSVRATWMPQGEKLLQLEREKGIVIR 169

Query: 176 FMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYV 235
           FMIGHSAT NSILD+AIDSEDA H DFLRLEH+EGYHELSAKTKIFFSTAVAKWDA+FYV
Sbjct: 170 FMIGHSATPNSILDRAIDSEDAHHNDFLRLEHVEGYHELSAKTKIFFSTAVAKWDAEFYV 229

Query: 236 KVDDDVHVNLGMLATTLSRHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKYF 295
           KVDDDVHVNLGML  TL+ H SKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKYF
Sbjct: 230 KVDDDVHVNLGMLVATLAHHHSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKYF 289

Query: 296 RHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWFIGLEVEHIDDRNMCCQTPP 353
           RHATGQIYAISKDLATYISINQPILHK+ANEDVSLGSWFIGLEVEHID+RNMCC TPP
Sbjct: 290 RHATGQIYAISKDLATYISINQPILHKYANEDVSLGSWFIGLEVEHIDERNMCCGTPP 347

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356509466|ref|XP_003523469.1| PREDICTED: beta-1,3-galactosyltransferase 7-like [Glycine max]

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 259/356 (72%), Positives = 295/356 (82%), Gaps = 14/356 (3%)

Query: 1   MKYRTSTTTIISTKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVAST 60
           MK RTST   IS  WIP   +F F +G+L ++  W+PPES+G  +   +R +QQ+ V S 
Sbjct: 1   MKTRTSTK--ISATWIPIFSVFSFIIGMLVTSRMWDPPESNGLLTAQHQRDQQQLQVISG 58

Query: 61  DCAKKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGLESS 120
           DCA K  Q +D   E+ KT  AI        + LDK +  LQMELAA+RS RE  G+  S
Sbjct: 59  DCATKKMQPKDAVSELQKTHEAI--------QALDKQVSMLQMELAAARSSRE-SGISDS 109

Query: 121 AANASTNSR---RPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFM 177
            A+ +T+     R K F+VIGINTAFSSRKRRDSVR+TWMPQGE+L+QLEREKGI+IRFM
Sbjct: 110 NASTTTSGEGAPRKKAFIVIGINTAFSSRKRRDSVRETWMPQGEQLLQLEREKGIVIRFM 169

Query: 178 IGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKV 237
           IGHSATSNSILD+AIDSE+AQHKDFLRLEH+EGYHELSAKTKIFFSTAV+ WDADFYVKV
Sbjct: 170 IGHSATSNSILDRAIDSEEAQHKDFLRLEHVEGYHELSAKTKIFFSTAVSMWDADFYVKV 229

Query: 238 DDDVHVNLGMLATTLSRHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKYFRH 297
           DDDVHVNLG+LATTL+RHRSKPRVYIGCMKSGPVLS+K+VKYHEPE+WKFGEEGNKYFRH
Sbjct: 230 DDDVHVNLGVLATTLARHRSKPRVYIGCMKSGPVLSRKDVKYHEPEFWKFGEEGNKYFRH 289

Query: 298 ATGQIYAISKDLATYISINQPILHKFANEDVSLGSWFIGLEVEHIDDRNMCCQTPP 353
           ATGQIYAISKDLATYISINQPILHK+ANEDVSLG+WFIGLEVEHIDDRNMCC TPP
Sbjct: 290 ATGQIYAISKDLATYISINQPILHKYANEDVSLGAWFIGLEVEHIDDRNMCCGTPP 345

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356551604|ref|XP_003544164.1| PREDICTED: beta-1,3-galactosyltransferase 7-like [Glycine max]

 Score =  523 bits (1347), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 261/359 (72%), Positives = 295/359 (82%), Gaps = 14/359 (3%)

Query: 1   MKYRTSTTTIISTKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVAST 60
           MK RTS    IS KW+P   +  F +G+L +   W PPES+G   L+  R EQ++ V S 
Sbjct: 1   MKTRTSKK--ISAKWVPIFSVSSFLIGMLITTRMWEPPESNG-VLLSNHRHEQELQVVSG 57

Query: 61  DCA-KKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGRE---MPG 116
           DCA KK  QD+DV  +V KT  AI     +  R+LDK +  LQMELAA+RS RE     G
Sbjct: 58  DCATKKPVQDEDVMSKVYKTHEAI-----QGVRSLDKQVSMLQMELAAARSTREPEISDG 112

Query: 117 LESSAANASTNSRRP--KVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIII 174
             ++ A+  T    P  KVFVVIGINTAFSSRKRRDSVR+TWMPQGE+L+QLEREKGI+I
Sbjct: 113 SNNTLASGVTTEGPPRKKVFVVIGINTAFSSRKRRDSVRETWMPQGEQLLQLEREKGIVI 172

Query: 175 RFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFY 234
           RFMIGHSATSNSILD+AIDSE+AQHKDFLRLEH EGYHELSAKTK FFSTAVAKWDA+FY
Sbjct: 173 RFMIGHSATSNSILDRAIDSEEAQHKDFLRLEHAEGYHELSAKTKTFFSTAVAKWDAEFY 232

Query: 235 VKVDDDVHVNLGMLATTLSRHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKY 294
           VKVDDDVHVNLG+LATTL+RHRSKPRVY+GCMKSGPVLS+K+VKYHEPE+WKFGEEGNKY
Sbjct: 233 VKVDDDVHVNLGVLATTLARHRSKPRVYVGCMKSGPVLSRKDVKYHEPEFWKFGEEGNKY 292

Query: 295 FRHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWFIGLEVEHIDDRNMCCQTPP 353
           FRHATGQIYAISKDLATYISINQPILHK+ANEDVSLG+WFIGLEVEHIDDR+MCC TPP
Sbjct: 293 FRHATGQIYAISKDLATYISINQPILHKYANEDVSLGAWFIGLEVEHIDDRSMCCGTPP 351

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297842561|ref|XP_002889162.1| galactosyltransferase family protein [Arabidopsis lyrata subsp. lyrata] gi|297335003|gb|EFH65421.1| galactosyltransferase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  521 bits (1343), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 248/355 (69%), Positives = 300/355 (84%), Gaps = 11/355 (3%)

Query: 1   MKYRTSTTTIISTKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVAST 60
           MK++ S   +IS KW+PF+C+  FALG +F++ +W PP   G   ++  RR+ ++ + S 
Sbjct: 1   MKHKVSKR-VISLKWVPFLCISFFALGAIFTSRSWEPPSDSGSQLISQLRRDHELQIVSD 59

Query: 61  DCA--KKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGLE 118
           DCA  KKA Q++DV  +VL+T  AI     + DR+LDK++  L+M+LA++++ ++  G E
Sbjct: 60  DCAHNKKATQEKDVIDQVLRTHEAI-----QGDRSLDKSVSTLEMQLASTKTSQD--GSE 112

Query: 119 SSAANASTNSRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMI 178
           ++ +      R+ KVF+V+GINTAFSSRKRRDSVR+TWMPQGEKL +LE++KGI+I+FMI
Sbjct: 113 TTNSLTGETPRK-KVFMVMGINTAFSSRKRRDSVRETWMPQGEKLEKLEQDKGIVIKFMI 171

Query: 179 GHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVD 238
           GHSATSNSILD+AIDSEDAQHKDFLRLEH+EGYHELSAKTKIFFSTAVAKWDA+FY+KVD
Sbjct: 172 GHSATSNSILDRAIDSEDAQHKDFLRLEHVEGYHELSAKTKIFFSTAVAKWDAEFYIKVD 231

Query: 239 DDVHVNLGMLATTLSRHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKYFRHA 298
           DDVHVNLGMLA+TL RHRSKPRVYIGCMKSGPVL+QK VKYHEPEYWKFGE+GNKYFRHA
Sbjct: 232 DDVHVNLGMLASTLVRHRSKPRVYIGCMKSGPVLAQKTVKYHEPEYWKFGEDGNKYFRHA 291

Query: 299 TGQIYAISKDLATYISINQPILHKFANEDVSLGSWFIGLEVEHIDDRNMCCQTPP 353
           TGQIYAISKDLA YISINQPILHK+ANEDVSLGSWFIGLEVEHIDDRN CC TPP
Sbjct: 292 TGQIYAISKDLAKYISINQPILHKYANEDVSLGSWFIGLEVEHIDDRNFCCGTPP 346

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224082202|ref|XP_002306601.1| predicted protein [Populus trichocarpa] gi|222856050|gb|EEE93597.1| predicted protein [Populus trichocarpa]

 Score =  516 bits (1329), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 259/354 (73%), Positives = 291/354 (82%), Gaps = 15/354 (4%)

Query: 7   TTTIISTKWIPFVCLFCFALGILFSNLTWNP-PESDGRPSLNVRRREQQVAVASTDCA-- 63
            TT  S KWI F+C+FCFA+G LFSN  W+   E +G+  L+ RR EQ + V + D    
Sbjct: 3   VTTKASVKWILFLCVFCFAIGTLFSNRLWDSSAEPNGQQLLSQRRHEQVLQVINDDSTTN 62

Query: 64  KKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGLESSAAN 123
           K    + D   EVLKT  AI   S      LDK++  LQM+LAASRS +EM  L+SSAA 
Sbjct: 63  KNLSHNNDAMDEVLKTHEAIQLVS------LDKSVAMLQMQLAASRSSQEMS-LDSSAA- 114

Query: 124 ASTNSR----RPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIG 179
            ST SR    + KVF+VIGINTAFSSRKRRDS+R+TWMPQG+KL+QLER+KGII+RFMIG
Sbjct: 115 VSTLSRDGSAKQKVFMVIGINTAFSSRKRRDSIRETWMPQGKKLMQLERDKGIIVRFMIG 174

Query: 180 HSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDD 239
            SATSNSILD+AIDSEDAQHKDFLRLEH+EGYHELSAKTK FFSTAVAKWDA+FYVKVDD
Sbjct: 175 QSATSNSILDRAIDSEDAQHKDFLRLEHVEGYHELSAKTKNFFSTAVAKWDAEFYVKVDD 234

Query: 240 DVHVNLGMLATTLSRHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKYFRHAT 299
           DVHVNLGMLA+TL+RHRSKPRVYIGCMKSGPVLSQ+N KYHEPEYWKFG EGN YFRHAT
Sbjct: 235 DVHVNLGMLASTLARHRSKPRVYIGCMKSGPVLSQRNAKYHEPEYWKFGVEGNNYFRHAT 294

Query: 300 GQIYAISKDLATYISINQPILHKFANEDVSLGSWFIGLEVEHIDDRNMCCQTPP 353
           GQIYAISK+LATYISINQPILHK+ANEDVSLG+WFIGLEVE IDDRNMCC TPP
Sbjct: 295 GQIYAISKELATYISINQPILHKYANEDVSLGAWFIGLEVELIDDRNMCCGTPP 348

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225438287|ref|XP_002269415.1| PREDICTED: beta-1,3-galactosyltransferase 7 [Vitis vinifera] gi|296082649|emb|CBI21654.3| unnamed protein product [Vitis vinifera]

 Score =  516 bits (1328), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 250/358 (69%), Positives = 296/358 (82%), Gaps = 15/358 (4%)

Query: 1   MKYRTSTTTIISTKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVAST 60
           MK R ++    S  WI  +C+F FALG+LF+N  W  PES+ R  ++ +R EQ++ + S 
Sbjct: 1   MKSRNNSEKF-SPTWIFILCIFSFALGMLFTNRMWVAPESN-RQMISTQRHEQELQIISE 58

Query: 61  DCA--KKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGLE 118
           DC   KK  QD+DV  EV KT  AI        ++LDKTI  LQ+EL+A+R+  +   LE
Sbjct: 59  DCTSKKKVGQDKDVMGEVYKTHEAI--------QSLDKTISTLQIELSATRTSHKTGSLE 110

Query: 119 S---SAANASTNSRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIR 175
           S   +  ++  +S R K F+VIGINTAFSSRKRRDS+R+TWMP+G+KL+QLEREKGI++R
Sbjct: 111 SLPDAMRSSQDSSPRKKAFMVIGINTAFSSRKRRDSIRETWMPKGQKLLQLEREKGIVVR 170

Query: 176 FMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYV 235
           FMIGHSATS+SILD+AIDSE++QHKDFLRLEHIEGYHEL+AKTK FFS AVA+WDA+FYV
Sbjct: 171 FMIGHSATSSSILDRAIDSEESQHKDFLRLEHIEGYHELTAKTKTFFSMAVAQWDAEFYV 230

Query: 236 KVDDDVHVNLGMLATTLSRHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKYF 295
           KVDDDVHVNLGMLA+TL+RHRSKPRVYIGCMKSGPVLSQK VKYHEPEYWKFGEEGNKYF
Sbjct: 231 KVDDDVHVNLGMLASTLARHRSKPRVYIGCMKSGPVLSQKTVKYHEPEYWKFGEEGNKYF 290

Query: 296 RHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWFIGLEVEHIDDRNMCCQTPP 353
           RHATGQIYAISKDLATYIS+NQPILHK+ANEDVSLG+WFIGLEVEHIDDRN+CC TPP
Sbjct: 291 RHATGQIYAISKDLATYISVNQPILHKYANEDVSLGAWFIGLEVEHIDDRNLCCGTPP 348

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357461703|ref|XP_003601133.1| Avr9 elicitor response protein [Medicago truncatula] gi|355490181|gb|AES71384.1| Avr9 elicitor response protein [Medicago truncatula] gi|388513949|gb|AFK45036.1| unknown [Medicago truncatula]

 Score =  513 bits (1322), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 250/356 (70%), Positives = 287/356 (80%), Gaps = 13/356 (3%)

Query: 1   MKYRTSTTTIISTKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVAST 60
           MK R ST   IS KWIP   +F F +G+L +   W  PES+G      +R +Q++ V S 
Sbjct: 1   MKTRASTK--ISAKWIPIFSVFSFLIGMLITTRMWEQPESNGVIISKHQRDQQELQVISE 58

Query: 61  DC---AKKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGL 117
           DC    KK  + +D   E+ KT  AI        + LDK +  LQMELAA+RS R+    
Sbjct: 59  DCDVTKKKQEKPKDEMNELYKTHEAI--------QALDKQVSMLQMELAAARSSRKKNST 110

Query: 118 ESSAANASTNSRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFM 177
            S+  ++   S++ K F+VIGINTAFSSRKRRDSVR+TWMPQGE+L+QLEREKGI+IRFM
Sbjct: 111 GSATNSSEGASKKKKAFIVIGINTAFSSRKRRDSVRETWMPQGEQLLQLEREKGIVIRFM 170

Query: 178 IGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKV 237
           IGHSATSNSILD+AIDSE+AQHKDFLRL+H+EGYHELSAKTKIFFSTAV  WDADFYVKV
Sbjct: 171 IGHSATSNSILDRAIDSEEAQHKDFLRLQHVEGYHELSAKTKIFFSTAVGLWDADFYVKV 230

Query: 238 DDDVHVNLGMLATTLSRHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKYFRH 297
           DDDVHVNLG+LA TL+RHRSKPRVYIGCMKSGPVLS+K+VKYHEPE+WKFGEEGNKYFRH
Sbjct: 231 DDDVHVNLGVLAATLARHRSKPRVYIGCMKSGPVLSRKDVKYHEPEFWKFGEEGNKYFRH 290

Query: 298 ATGQIYAISKDLATYISINQPILHKFANEDVSLGSWFIGLEVEHIDDRNMCCQTPP 353
           ATGQIYAISKDLATYISINQPILHK+ANEDVSLGSWFIGLEVEHIDDR+MCC TPP
Sbjct: 291 ATGQIYAISKDLATYISINQPILHKYANEDVSLGSWFIGLEVEHIDDRSMCCGTPP 346

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	370
TAIR|locus:2029471	393	AT1G77810 [Arabidopsis thalian	0.872	0.821	0.699	2.6e-127
TAIR|locus:505006138	398	DD46 [Arabidopsis thaliana (ta	0.929	0.864	0.622	7.9e-117
TAIR|locus:2207225	407	AT1G05170 [Arabidopsis thalian	0.913	0.830	0.606	2.6e-109
TAIR|locus:2038031	399	AT1G32930 [Arabidopsis thalian	0.918	0.852	0.578	2.1e-107
TAIR|locus:2062545	409	AT2G32430 [Arabidopsis thalian	0.916	0.828	0.586	5.1e-106
TAIR|locus:2027352	384	AT1G11730 [Arabidopsis thalian	0.689	0.664	0.697	4.6e-103
TAIR|locus:2116452	407	AT4G26940 [Arabidopsis thalian	0.894	0.813	0.577	6e-103
TAIR|locus:2154247	338	AT5G53340 [Arabidopsis thalian	0.686	0.751	0.463	1.6e-61
TAIR|locus:2116627	345	AT4G32120 [Arabidopsis thalian	0.678	0.727	0.438	6.1e-55
TAIR|locus:2059531	346	AT2G25300 [Arabidopsis thalian	0.681	0.728	0.429	2.1e-54

TAIR|locus:2029471 AT1G77810 [Arabidopsis thaliana (taxid:3702)]

 Score = 1250 (445.1 bits), Expect = 2.6e-127, P = 2.6e-127
 Identities = 244/349 (69%), Positives = 284/349 (81%)

Query:    14 KWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVASTDCA--KKAFQDQD 71
             KW+PF+C+  FALG +F++ +W P    G   ++   R+ ++ + S DCA  KKA Q++D
Sbjct:    13 KWVPFLCISFFALGAIFTSRSWEPSSDSGSQLISQHHRDHELQIVSDDCAHNKKATQEKD 72

Query:    72 VAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREM-PGLEXXXXXXXXXXRR 130
             V  EVL+T  AI D     DR+LDK++  L    +++RS +EM  G E           R
Sbjct:    73 VTGEVLRTHEAIQD-----DRSLDKSVSTL----SSTRSSQEMVDGSETNP--------R 115

Query:   131 PKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDK 190
              KVF+V+GINTAFSSRKRRDSVR+TWMPQGEKL +LE+EKGI+I+FMIGHSATSNSILD+
Sbjct:   116 KKVFMVMGINTAFSSRKRRDSVRETWMPQGEKLERLEQEKGIVIKFMIGHSATSNSILDR 175

Query:   191 AIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLAT 250
             AIDSEDAQHKDFLRLEH+EGYHELSAKTKIFFSTAVAKWDA+FY+KVDDDVHVNLGMLA+
Sbjct:   176 AIDSEDAQHKDFLRLEHVEGYHELSAKTKIFFSTAVAKWDAEFYIKVDDDVHVNLGMLAS 235

Query:   251 TLSRHRSKPRVYIGCMKSGPVLSQ------KNVKYHEPEYWKFGEEGNKYFRHATGQIYA 304
             TL+RHRSKPRVYIGCMKSGPVL+Q      + VKYHEPEYWKFGE+GNKYFRHATGQIYA
Sbjct:   236 TLARHRSKPRVYIGCMKSGPVLAQNLLNCFRTVKYHEPEYWKFGEDGNKYFRHATGQIYA 295

Query:   305 ISKDLATYISINQPILHKFANEDVSLGSWFIGLEVEHIDDRNMCCQTPP 353
             ISKDLA YISINQPILHK+ANEDVSLGSWFIGLEVEHIDDRN CC TPP
Sbjct:   296 ISKDLANYISINQPILHKYANEDVSLGSWFIGLEVEHIDDRNFCCGTPP 344

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0048531 "beta-1,3-galactosyltransferase activity" evidence=IDA

TAIR|locus:505006138 DD46 [Arabidopsis thaliana (taxid:3702)]

 Score = 1151 (410.2 bits), Expect = 7.9e-117, P = 7.9e-117
 Identities = 221/355 (62%), Positives = 270/355 (76%)

Query:     1 MKYRXXXXXXXXXKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVAST 60
             MK+           W+P +C+ CF LG +F++   +     G   +   RR+Q++ + + 
Sbjct:     1 MKHNNKVSKRLTMTWVPLLCISCFFLGAIFTSKLRSASSDSGSQLILQHRRDQELKIVTQ 60

Query:    61 DCA--KKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGLE 118
             D A  KK  QD DV +EVLKT  AI     ES   LDK++  LQ +L+A+ S +++  + 
Sbjct:    61 DYAHEKKKSQDNDVMEEVLKTHKAI-----ES---LDKSVSMLQKQLSATHSPQQIVNVS 112

Query:   119 XXXXXXXXXXRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMI 178
                       +  KVF+VIGINTAFSSRKRRDS+R+TWMPQGEKL +LE+EKGI+++FMI
Sbjct:   113 ATNSSTEGNQKN-KVFMVIGINTAFSSRKRRDSLRETWMPQGEKLEKLEKEKGIVVKFMI 171

Query:   179 GHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVD 238
             GHS+T NS+LDK IDSEDAQ+ DF RL+H+EGY+ LSAKTK FFS+AVAKWDA+FYVK+D
Sbjct:   172 GHSSTPNSMLDKEIDSEDAQYNDFFRLDHVEGYYNLSAKTKSFFSSAVAKWDAEFYVKID 231

Query:   239 DDVHVNLGMLATTLSRHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKYFRHA 298
             DDVHVNLG LA+TL+ HRSKPRVYIGCMKSGPVL++K  KY EPE+WKFGEEGNKYFRHA
Sbjct:   232 DDVHVNLGTLASTLASHRSKPRVYIGCMKSGPVLTKKTAKYREPEFWKFGEEGNKYFRHA 291

Query:   299 TGQIYAISKDLATYISINQPILHKFANEDVSLGSWFIGLEVEHIDDRNMCCQTPP 353
             TGQIYAISKDLATYIS NQPILHK+ANEDV+LGSWFIGLEVE IDDRN CC TPP
Sbjct:   292 TGQIYAISKDLATYISNNQPILHKYANEDVTLGSWFIGLEVEQIDDRNFCCGTPP 346

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

TAIR|locus:2207225 AT1G05170 [Arabidopsis thaliana (taxid:3702)]

 Score = 1080 (385.2 bits), Expect = 2.6e-109, P = 2.6e-109
 Identities = 208/343 (60%), Positives = 255/343 (74%)

Query:    14 KWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVASTDCAKKAFQDQDVA 73
             KW   +CL  F +G+ F+N  WN PES G    +V   E+ + + S  C  KA   ++V 
Sbjct:    18 KWTILLCLGSFCVGMFFTNRMWNIPESKGMSHPSVTEAER-LKLVSEGCNPKALYQKEVK 76

Query:    74 KEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGRE--MPGLEXXXXXXXXXXRRP 131
             ++     G + +  +   +TLDKTI  L+MELAA+RS +E    G            +  
Sbjct:    77 RDPQALFGEVANTHIAL-QTLDKTISSLEMELAAARSVQESLQNGAPLSDDMGKKQPQEQ 135

Query:   132 KVFV-VIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDK 190
             + F+ V+GINTAFSSRKRRDS+R TWMPQGEK  +LE EKGIIIRF+IGHSAT+  ILD+
Sbjct:   136 RRFLMVVGINTAFSSRKRRDSIRATWMPQGEKRKRLEEEKGIIIRFVIGHSATTGGILDR 195

Query:   191 AIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLAT 250
             AI++ED +H DFLRL+H+EGY ELS KTK +FSTA + WDADFYVKVDDDVHVN+  L  
Sbjct:   196 AIEAEDRKHGDFLRLDHVEGYLELSGKTKTYFSTAFSMWDADFYVKVDDDVHVNIATLGE 255

Query:   251 TLSRHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLA 310
             TL RHR KPRVYIGCMKSGPVLSQK V+YHEPEYWKFGE GNKYFRHATGQ+YAIS+DLA
Sbjct:   256 TLVRHRKKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGENGNKYFRHATGQLYAISRDLA 315

Query:   311 TYISINQPILHKFANEDVSLGSWFIGLEVEHIDDRNMCCQTPP 353
             +YISINQ +LHK+ANEDVSLG+WFIG++V+HIDDR +CC TPP
Sbjct:   316 SYISINQHVLHKYANEDVSLGAWFIGIDVKHIDDRRLCCGTPP 358

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

TAIR|locus:2038031 AT1G32930 [Arabidopsis thaliana (taxid:3702)]

 Score = 1062 (378.9 bits), Expect = 2.1e-107, P = 2.1e-107
 Identities = 206/356 (57%), Positives = 259/356 (72%)

Query:     2 KYRXXXXXXXXXKWIPFVCLFCFALGILFSNLTWNPPES-DGRPSLNVRRREQQVAVAS- 59
             +Y+         +W+  +C+  F LG+L  N      E+ DG    +  + +Q  ++   
Sbjct:     5 RYQKSATSGVSARWVFVLCISSFLLGVLVVNRLLASFETVDGIERASPEQNDQSRSLNPL 64

Query:    60 TDCAKKAFQDQDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGRE--MPGL 117
              DC  K   + D+   V  T   I        +TLDKTI  L++ELA +R+ R     G 
Sbjct:    65 VDCESK---EGDILSRVSHTHDVI--------KTLDKTISSLEVELATARAARSDGRDGS 113

Query:   118 EXXXXXXXXXXR-RPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRF 176
                        + RP++F V+GI TAFSSRKRRDS+R TW+P+G++L +LE EKGII+RF
Sbjct:   114 PAVAKTVADQSKIRPRMFFVMGIMTAFSSRKRRDSIRGTWLPKGDELKRLETEKGIIMRF 173

Query:   177 MIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVK 236
             +IGHS++   +LD  I++E+ QHKDF RL HIEGYHELS+KT+I+FS+AVAKWDADFY+K
Sbjct:   174 VIGHSSSPGGVLDHTIEAEEEQHKDFFRLNHIEGYHELSSKTQIYFSSAVAKWDADFYIK 233

Query:   237 VDDDVHVNLGMLATTLSRHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKYFR 296
             VDDDVHVNLGML +TL+RHRSKPRVYIGCMKSGPVL+QK VKYHEPEYWKFGEEGNKYFR
Sbjct:   234 VDDDVHVNLGMLGSTLARHRSKPRVYIGCMKSGPVLAQKGVKYHEPEYWKFGEEGNKYFR 293

Query:   297 HATGQIYAISKDLATYISINQPILHKFANEDVSLGSWFIGLEVEHIDDRNMCCQTP 352
             HATGQIYAISKDLATYIS+N+ +LHK+ANEDVSLGSWFIGL+VEHIDDR++CC TP
Sbjct:   294 HATGQIYAISKDLATYISVNRQLLHKYANEDVSLGSWFIGLDVEHIDDRSLCCGTP 349

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

GO:0006346 "methylation-dependent chromatin silencing" evidence=RCA

GO:0031048 "chromatin silencing by small RNA" evidence=RCA

GO:0051567 "histone H3-K9 methylation" evidence=RCA

TAIR|locus:2062545 AT2G32430 [Arabidopsis thaliana (taxid:3702)]

 Score = 1049 (374.3 bits), Expect = 5.1e-106, P = 5.1e-106
 Identities = 201/343 (58%), Positives = 250/343 (72%)

Query:    14 KWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVASTDCAKKAFQDQDVA 73
             KW   +C   F  GILF++  W  PES   P  +V    +++ + S  C  K    ++V 
Sbjct:    19 KWTFLLCFGSFCFGILFTDRMWIIPESKDMPRPSVSTEAERLKLISEGCDPKTLYQKEVN 78

Query:    74 KEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGLEXXXXXXXXXXRRP-- 131
             ++     G +   +  + +TLDKTI  L+MELAA+RS +E               + P  
Sbjct:    79 RDPQALFGEVSK-THNAIQTLDKTISSLEMELAAARSAQESLVNGAPISNDMEKKQLPGK 137

Query:   132 -KVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDK 190
              +  +V+GINTAFSSRKRRDSVR TWMP GEK  +LE EKGIIIRF+IGHSAT+  ILD+
Sbjct:   138 RRYLMVVGINTAFSSRKRRDSVRTTWMPSGEKRKKLEEEKGIIIRFVIGHSATAGGILDR 197

Query:   191 AIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLAT 250
             +I++ED +H DFLRL+H+EGY ELS KTK +FSTAV+KWDA+FYVKVDDDVHVN+  L  
Sbjct:   198 SIEAEDKKHGDFLRLDHVEGYLELSGKTKTYFSTAVSKWDAEFYVKVDDDVHVNIATLGE 257

Query:   251 TLSRHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLA 310
             TL RHR K RVY+GCMKSGPVLSQK V+YHEPEYWKFGE GNKYFRHATGQ+YAIS+DLA
Sbjct:   258 TLVRHRKKHRVYLGCMKSGPVLSQKGVRYHEPEYWKFGENGNKYFRHATGQLYAISRDLA 317

Query:   311 TYISINQPILHKFANEDVSLGSWFIGLEVEHIDDRNMCCQTPP 353
             +YIS+NQ +LHK+ANEDV+LG+WFIGL+V HIDDR +CC TPP
Sbjct:   318 SYISLNQHVLHKYANEDVTLGAWFIGLDVTHIDDRRLCCGTPP 360

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

TAIR|locus:2027352 AT1G11730 [Arabidopsis thaliana (taxid:3702)]

 Score = 959 (342.6 bits), Expect = 4.6e-103, Sum P(2) = 4.6e-103
 Identities = 180/258 (69%), Positives = 211/258 (81%)

Query:    94 LDKTIGQLQMELAASRSGREMPGLEXXXXXXXXXXRRPKVFVVIGINTAFSSRKRRDSVR 153
             LDK+I  L+M+L A+R+ RE   L           +R K F+VIGINTAFSSRKRRDSVR
Sbjct:    79 LDKSISNLEMKLVAARAERE--SLSGKFNISNEAKKR-KYFMVIGINTAFSSRKRRDSVR 135

Query:   154 DTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHE 213
              TWMPQGE L +LE EKGII+RF+IGHS  S+ ILDKAI++E+  H DFLRLEH EGY +
Sbjct:   136 STWMPQGENLKKLEEEKGIIVRFVIGHSVLSHGILDKAIEAEEKTHGDFLRLEHTEGYMK 195

Query:   214 LSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRHRSKPRVYIGCMKSGPVLS 273
             LSAKTK FF+TAV+ WDA+FY+KVDDDVHVNL  L   LS H++KPRVY+GCMKSGPVL+
Sbjct:   196 LSAKTKTFFATAVSLWDAEFYIKVDDDVHVNLASLKKALSAHQNKPRVYVGCMKSGPVLA 255

Query:   274 QKNVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISINQPILHKFANEDVSLGSW 333
             +K+VKYHEPEYWKFGE GNKYFRHATGQ YAISKDLATYI INQ +LHK+ANEDVSLGSW
Sbjct:   256 RKSVKYHEPEYWKFGEVGNKYFRHATGQFYAISKDLATYILINQDLLHKYANEDVSLGSW 315

Query:   334 FIGLEVEHIDDRNMCCQT 351
             FIGL VEH+D++ +CC T
Sbjct:   316 FIGLNVEHVDEKRLCCST 333

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

TAIR|locus:2116452 AT4G26940 [Arabidopsis thaliana (taxid:3702)]

 Score = 1020 (364.1 bits), Expect = 6.0e-103, P = 6.0e-103
 Identities = 198/343 (57%), Positives = 258/343 (75%)

Query:    14 KWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVASTDC--AKKAFQDQD 71
             KW  F+C+  F  GILFS+  W  PES+   S +    ++++ + S DC  +KK  + + 
Sbjct:    22 KWTLFLCIGFFCAGILFSDRMWPEPESNV-VSRDTVASDERLRLESEDCDSSKKGLKRE- 79

Query:    72 VAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGRE--MPGLEXXXXXXX-XXX 128
              +K++L   G ++  S ++ +TLDKTI +L+ ELA +R+ +E  M G             
Sbjct:    80 -SKDIL---GDVYK-SPDAIQTLDKTISKLETELADARAAQESIMNGSPVSDDFKLPETV 134

Query:   129 RRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSIL 188
              + K  +V+G+NTAFSSRKRRDSVR TWMP GE+  +LE EKGI++RF+IGHS+T   IL
Sbjct:   135 TKRKYLMVVGVNTAFSSRKRRDSVRATWMPPGEERKKLEEEKGIVMRFVIGHSSTPGGIL 194

Query:   189 DKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGML 248
             D+AI +E+++H DFLRL+H+EGY ELSAKTK +F+TA A WDADFYVKVDDDVHVN+  L
Sbjct:   195 DRAIQAEESKHGDFLRLDHVEGYLELSAKTKTYFTTAFAMWDADFYVKVDDDVHVNIATL 254

Query:   249 ATTLSRHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKYFRHATGQIYAISKD 308
                L+R+R KPRVYIGCMKSGPVL+QK V+YHEPEYWKFGEEGNKYFRHATGQ+YAIS++
Sbjct:   255 GAELARYRMKPRVYIGCMKSGPVLAQKGVRYHEPEYWKFGEEGNKYFRHATGQLYAISRE 314

Query:   309 LATYISINQPILHKFANEDVSLGSWFIGLEVEHIDDRNMCCQT 351
             LA+YISINQ +LHK+ NEDVSLGSWF+GL+VEH+DDR +CC T
Sbjct:   315 LASYISINQNVLHKYVNEDVSLGSWFLGLDVEHVDDRRLCCGT 357

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

TAIR|locus:2154247 AT5G53340 [Arabidopsis thaliana (taxid:3702)]

 Score = 629 (226.5 bits), Expect = 1.6e-61, P = 1.6e-61
 Identities = 120/259 (46%), Positives = 170/259 (65%)

Query:    92 RTLDKTIGQLQMELAASRSGREMPGLEXXXXXXXXXXRRPKVFVVIGINTAFSSRKRRDS 151
             R   KT+  L+MEL+++R                   +RP   VVIGI T+  ++K+RD+
Sbjct:    72 REQKKTLAALEMELSSARQ-EGFVSKSPKLADGTETKKRP--LVVIGIMTSLGNKKKRDA 128

Query:   152 VRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHI-EG 210
             VR  WM  G  L +LE EKG+I RF+IG SA     +DK+ID+E++Q  DF+ L+ + E 
Sbjct:   129 VRQAWMGTGASLKKLESEKGVIARFVIGRSANKGDSMDKSIDTENSQTDDFIILDDVVEA 188

Query:   211 YHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRHRSKPRVYIGCMKSGP 270
               E S K K+FF+ A  +WDA FY K  D+++VN+  L TTL+ H   PR YIGCMKSG 
Sbjct:   189 PEEASKKVKLFFAYAADRWDAQFYAKAIDNIYVNIDALGTTLAAHLENPRAYIGCMKSGE 248

Query:   271 VLSQKNVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISINQPILHKFANEDVSL 330
             V S+ N K++EPE+WKFG++   YFRHA G++Y I+  LA ++SIN+ ILH +A++DVS 
Sbjct:   249 VFSEPNHKWYEPEWWKFGDK-KAYFRHAYGEMYVITHALARFVSINRDILHSYAHDDVST 307

Query:   331 GSWFIGLEVEHIDDRNMCC 349
             GSWF+GL+V+H+D+   CC
Sbjct:   308 GSWFVGLDVKHVDEGKFCC 326

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

GO:0030244 "cellulose biosynthetic process" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2116627 AT4G32120 [Arabidopsis thaliana (taxid:3702)]

 Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
 Identities = 115/262 (43%), Positives = 169/262 (64%)

Query:    92 RTLDKTIGQLQMELAASRSGREMPGLEXXXXXXXXXXRRPKVFVVIGINTAFSSRKRRDS 151
             + L++ I + +MELA ++S     G            +  K+  VIG+ T F S  +R+ 
Sbjct:    83 KDLERRIVETEMELAQAKS----QGYLKKQKSVSSSGK--KMLAVIGVYTGFGSHLKRNK 136

Query:   152 VRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLE-HIEG 210
              R +WMP+ + L +LE E+G++IRF+IG SA     LD+ ID E+   KDFL LE H E 
Sbjct:   137 FRGSWMPRDDALKKLE-ERGVVIRFVIGRSANRGDSLDRKIDEENRATKDFLILENHEEA 195

Query:   211 YHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNL-GMLATTLSRHRSKPRVYIGCMKSG 269
               EL  K K F+S AV  WDA+FYVKVDD+V ++L GM+A   SR RS+   YIGCMKSG
Sbjct:   196 QEELPKKVKFFYSAAVQNWDAEFYVKVDDNVDLDLEGMIALLESR-RSQDGAYIGCMKSG 254

Query:   270 PVLSQKNVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISINQPILHKFANEDVS 329
              V++++  +++EPE+WKFG++   YFRHATG +  +SK+LA Y++IN  +L  +A +D +
Sbjct:   255 DVITEEGSQWYEPEWWKFGDD-KSYFRHATGSLVILSKNLAQYVNINSGLLKTYAFDDTT 313

Query:   330 LGSWFIGLEVEHIDDRNMCCQT 351
             +GSW IG++  +IDD  +CC +
Sbjct:   314 IGSWMIGVQATYIDDNRLCCSS 335

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0009086 "methionine biosynthetic process" evidence=RCA

TAIR|locus:2059531 AT2G25300 [Arabidopsis thaliana (taxid:3702)]

 Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
 Identities = 112/261 (42%), Positives = 163/261 (62%)

Query:    92 RTLDKTIGQLQMELAASRSGREMPGLEXXXXXXXXXXRRPKVFVVIGINTAFSSRKRRDS 151
             + L++ I + +MEL  ++S   +  L+             K+  VIG+ + F S  RR++
Sbjct:    84 KDLERRIVETEMELTLAKSQGYLKNLKSGSSSGK------KLLAVIGVYSGFGSHLRRNT 137

Query:   152 VRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLE-HIEG 210
              R ++MPQG+ L +LE E+GI+IRF+IG S      LD+ ID E+   KDFL LE H E 
Sbjct:   138 FRGSYMPQGDALRKLE-ERGIVIRFVIGRSPNRGDSLDRKIDEENQARKDFLILENHEEA 196

Query:   211 YHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRHRSKPRVYIGCMKSGP 270
               EL+ K K FFS AV  WDA+FY+KVDD++ ++L  L   L   R +   YIGCMKSG 
Sbjct:   197 QEELAKKVKFFFSAAVQNWDAEFYIKVDDNIDLDLEGLIGLLESRRGQDAAYIGCMKSGE 256

Query:   271 VLSQKNVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISINQPILHKFANEDVSL 330
             V++++  K++EPE+WKFG+E   YFRHA G +  +SK LA Y++IN   L  +A +D S+
Sbjct:   257 VVAEEGGKWYEPEWWKFGDE-KSYFRHAAGSLLILSKTLAQYVNINSGSLKTYAFDDTSI 315

Query:   331 GSWFIGLEVEHIDDRNMCCQT 351
             GSW IG++  +IDD  +CC +
Sbjct:   316 GSWMIGVQATYIDDNRLCCSS 336

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6NQB7	B3GT7_ARATH	2, ., 4, ., 1, ., -	0.6869	0.9081	0.8549	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1	LOW CONFIDENCE prediction!
4th Layer	2.4.1.79	LOW CONFIDENCE prediction!
3rd Layer	2.4.1.134	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_II0817 hypothetical protein (390 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	370
PLN03193	408	PLN03193, PLN03193, beta-1,3-galactosyltransferase	1e-174
pfam01762	196	pfam01762, Galactosyl_T, Galactosyltransferase	2e-56
pfam13334	89	pfam13334, DUF4094, Domain of unknown function (DU	7e-26
PLN03133	636	PLN03133, PLN03133, beta-1,3-galactosyltransferase	8e-06

>gnl|CDD|178735 PLN03193, PLN03193, beta-1,3-galactosyltransferase; Provisional

 Score =  489 bits (1261), Expect = e-174
 Identities = 224/360 (62%), Positives = 264/360 (73%), Gaps = 23/360 (6%)

Query: 6   STTTIISTKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVASTDCAKK 65
           S+ +++S KW   +CL CF  G+LF++  W  PES G     V   E+ + + S  C  K
Sbjct: 11  SSRSVVSRKWTLLLCLGCFCAGMLFTDRMWTIPESKGISRTTVTEAER-LKLVSEGCDPK 69

Query: 66  AFQDQDVAK-------EVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRSGRE----- 113
               ++V +       EV KT  AI        +TLDKTI  L+MELAA+R+ +E     
Sbjct: 70  TLYQKEVKRDSKDIIGEVSKTHNAI--------QTLDKTISNLEMELAAARAAQESILNG 121

Query: 114 MPGLESSAANASTNSRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGII 173
            P  E      S+  RR    +V+GINTAFSSRKRRDSVR TWMPQGEK  +LE EKGII
Sbjct: 122 SPISEDLKKTQSSGKRR--YLMVVGINTAFSSRKRRDSVRATWMPQGEKRKKLEEEKGII 179

Query: 174 IRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADF 233
           IRF+IGHSATS  ILD+AI++ED +H DFLRL+H+EGY ELSAKTK +F+TAVA WDADF
Sbjct: 180 IRFVIGHSATSGGILDRAIEAEDRKHGDFLRLDHVEGYLELSAKTKTYFATAVAMWDADF 239

Query: 234 YVKVDDDVHVNLGMLATTLSRHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNK 293
           YVKVDDDVHVN+  L  TL RHR KPRVYIGCMKSGPVLSQK V+YHEPEYWKFGE GNK
Sbjct: 240 YVKVDDDVHVNIATLGETLVRHRKKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGENGNK 299

Query: 294 YFRHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWFIGLEVEHIDDRNMCCQTPP 353
           YFRHATGQ+YAISKDLA+YISINQ +LHK+ANEDVSLGSWFIGL+VEHIDDR +CC TPP
Sbjct: 300 YFRHATGQLYAISKDLASYISINQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPP 359

Length = 408

>gnl|CDD|216686 pfam01762, Galactosyl_T, Galactosyltransferase

 Score =  182 bits (465), Expect = 2e-56
 Identities = 54/205 (26%), Positives = 86/205 (41%), Gaps = 15/205 (7%)

Query: 147 KRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLE 206
            RR+++R TWM +G           I   F++G SA ++  +   +  E   + D + ++
Sbjct: 1   ARRNAIRKTWMNKGNS-----EGGRIKSLFLVGLSADTDGKVKDLVMEEAKLYGDIVVVD 55

Query: 207 HIEGYHELSAKTKIFFSTAVAKWD-ADFYVKVDDDVHVNLGMLATTLSRH---RSKPRVY 262
             + Y  L+ KT      AV+K   A +  K+DDDV+     L + L R     S+   Y
Sbjct: 56  FEDTYENLTFKTLTGLLYAVSKAPSAKYIGKIDDDVYFFPDKLLSLLDRGNINPSESSFY 115

Query: 263 IGCMKSGPVLSQKNVK-YHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISINQPILH 321
              MK GPV+  K  K Y  P  +        Y  +A+G  Y +S+D A  +        
Sbjct: 116 GYVMKEGPVIRNKKSKWYVPPSDYPCSR----YPPYASGPFYLLSRDAAELLLKASKHRR 171

Query: 322 KFANEDVSL-GSWFIGLEVEHIDDR 345
               EDV + G     L +  +D  
Sbjct: 172 FLQIEDVYVTGILADDLGISRVDLP 196

This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta- galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. Length = 196

>gnl|CDD|222051 pfam13334, DUF4094, Domain of unknown function (DUF4094)

 Score = 99.3 bits (248), Expect = 7e-26
 Identities = 40/101 (39%), Positives = 55/101 (54%), Gaps = 15/101 (14%)

Query: 12  STKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVASTDC--AKKAFQD 69
           S KW+  +C F F  G+L +N  W  PES+G     V+  E ++ + S DC   KK    
Sbjct: 1   SRKWVLLLCFFSFFAGLLVTNRLWTLPESNG-----VQDAENRLQLVSEDCDRKKKESDQ 55

Query: 70  QDVAKEVLKTRGAIHDGSVESDRTLDKTIGQLQMELAASRS 110
           +D+  EV  T  AI        ++LDKTI  L+MELAA+RS
Sbjct: 56  KDIMGEVSDTHEAI--------QSLDKTISSLEMELAAARS 88

This domain is found in plant proteins that often carry a galactosyltransferase domain, pfam01762, at their C-terminus. Length = 89

>gnl|CDD|215596 PLN03133, PLN03133, beta-1,3-galactosyltransferase; Provisional

 Score = 47.5 bits (113), Expect = 8e-06
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 26/229 (11%)

Query: 128 SRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIG-HSATSNS 186
           S +  + + IG+ +  ++ KRR +VR TWM Q + +    R   + +RF +G H    N 
Sbjct: 380 SPKKPLDLFIGVFSTANNFKRRMAVRRTWM-QYDAV----RSGAVAVRFFVGLH---KNQ 431

Query: 187 ILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIF--FSTAVAKWDADFYVKVDDDVHVN 244
           ++++ + +E   + D   +  ++ Y  ++ KT     F T V    A + +K DDD  V 
Sbjct: 432 MVNEELWNEARTYGDIQLMPFVDYYSLITWKTLAICIFGTEVVS--AKYVMKTDDDAFVR 489

Query: 245 LGMLATTLSRHRSKPRVYIGCMKSG--PVLSQKNVKYHEPEYWKFGEEGNKYFRHATGQI 302
           +  +  +L R      +  G + S   P  +  +  Y  PE W   EE   Y   A G  
Sbjct: 490 VDEVLASLKRTNVSHGLLYGLINSDSQPHRNPDSKWYISPEEWP--EE--TYPPWAHGPG 545

Query: 303 YAISKDLA--TYISINQPILHKFANEDVSLGSWFI-----GLEVEHIDD 344
           Y +S+D+A   Y    +  L  F  EDV++G W       GLEV++ +D
Sbjct: 546 YVVSRDIAKEVYKRHKEGRLKMFKLEDVAMGIWIAEMKKEGLEVKYEND 594

Length = 636

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	370
PLN03193	408	beta-1,3-galactosyltransferase; Provisional	100.0
KOG2288	274	consensus Galactosyltransferases [Carbohydrate tra	100.0
PLN03133	636	beta-1,3-galactosyltransferase; Provisional	100.0
KOG2287	349	consensus Galactosyltransferases [Carbohydrate tra	100.0
PF01762	195	Galactosyl_T: Galactosyltransferase; InterPro: IPR	100.0
PTZ00210	382	UDP-GlcNAc-dependent glycosyltransferase; Provisio	99.97
PF13334	95	DUF4094: Domain of unknown function (DUF4094)	99.95
PF02434	252	Fringe: Fringe-like; InterPro: IPR003378 The Notch	99.77
KOG2246	364	consensus Galactosyltransferases [Carbohydrate tra	99.58
PLN03153	537	hypothetical protein; Provisional	99.01
KOG3708	681	consensus Uncharacterized conserved protein [Funct	97.55
PF13641	228	Glyco_tranf_2_3: Glycosyltransferase like family 2	96.12
TIGR03472	373	HpnI hopanoid biosynthesis associated glycosyl tra	95.36
cd02525	249	Succinoglycan_BP_ExoA ExoA is involved in the bios	94.95
cd02510	299	pp-GalNAc-T pp-GalNAc-T initiates the formation of	94.86
cd04192	229	GT_2_like_e Subfamily of Glycosyltransferase Famil	94.84
PF01755	200	Glyco_transf_25: Glycosyltransferase family 25 (LP	94.4
cd02520	196	Glucosylceramide_synthase Glucosylceramide synthas	93.87
PRK11204	420	N-glycosyltransferase; Provisional	93.85
TIGR03469	384	HonB hopene-associated glycosyltransferase HpnB. T	93.63
cd06439	251	CESA_like_1 CESA_like_1 is a member of the cellulo	93.25
PF13506	175	Glyco_transf_21: Glycosyl transferase family 21	93.09
PF00535	169	Glycos_transf_2: Glycosyl transferase family 2; In	92.61
cd06421	234	CESA_CelA_like CESA_CelA_like are involved in the	92.6
cd04185	202	GT_2_like_b Subfamily of Glycosyltransferase Famil	92.38
PF13632	193	Glyco_trans_2_3: Glycosyl transferase family group	92.31
cd04186	166	GT_2_like_c Subfamily of Glycosyltransferase Famil	91.67
PRK14583	444	hmsR N-glycosyltransferase; Provisional	90.79
COG1215	439	Glycosyltransferases, probably involved in cell wa	88.77
cd02526	237	GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr	88.53
cd04195	201	GT2_AmsE_like GT2_AmsE_like is involved in exopoly	88.36
cd04196	214	GT_2_like_d Subfamily of Glycosyltransferase Famil	88.26
cd04187	181	DPM1_like_bac Bacterial DPM1_like enzymes are rela	87.58
cd06435	236	CESA_NdvC_like NdvC_like proteins in this family a	87.46
cd06423	180	CESA_like CESA_like is the cellulose synthase supe	87.45
cd06532	128	Glyco_transf_25 Glycosyltransferase family 25 [lip	85.35
cd06427	241	CESA_like_2 CESA_like_2 is a member of the cellulo	85.28
TIGR03111	439	glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0	84.79
COG1216	305	Predicted glycosyltransferases [General function p	84.03
cd06420	182	GT2_Chondriotin_Pol_N N-terminal domain of Chondro	82.65
cd06433	202	GT_2_WfgS_like WfgS and WfeV are involved in O-ant	81.87
cd04179	185	DPM_DPG-synthase_like DPM_DPG-synthase_like is a m	81.17
cd04184	202	GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot	81.01

>PLN03193 beta-1,3-galactosyltransferase; Provisional

Probab=100.00  E-value=8.4e-98  Score=740.53  Aligned_cols=353  Identities=63%  Similarity=1.039  Sum_probs=326.1

Q ss_pred             CCcccccchhHHHHHHHHHHHHHHHhcCCCCCCCCCCCCccccccccchhhcccccchhc-------cCCchHHHHHHHh
Q 017533            6 STTTIISTKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLNVRRREQQVAVASTDCAKK-------AFQDQDVAKEVLK   78 (370)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~   78 (370)
                      ++|+.||+||+++||++|||+|+|||||||..||+++ +..++.+++++++++++||+.+       +++++|+|+||++
T Consensus        11 ~~~~~~~~~~~~~~~~~~f~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~   89 (408)
T PLN03193         11 SSRSVVSRKWTLLLCLGCFCAGMLFTDRMWTIPESKG-ISRTTVTEAERLKLVSEGCDPKTLYQKEVKRDSKDIIGEVSK   89 (408)
T ss_pred             cccccccHHHHHHHHHHHHHHHHhhccccccCCcccc-ccccccchhhhhhhhccccccccccccccccchhHHHHHHhh
Confidence            4588999999999999999999999999999999887 5566668899999999999853       3489999999999


Q ss_pred             hhcccccCCcccchhhhhhHHhhhhhhcccccCCCCCCCCCcccc----CCCCCCCCCeEEEEEEECCCCCHHHHHHHHH
Q 017533           79 TRGAIHDGSVESDRTLDKTIGQLQMELAASRSGREMPGLESSAAN----ASTNSRRPKVFVVIGINTAFSSRKRRDSVRD  154 (370)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~l~~el~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~llI~V~S~~~~~~rR~aIR~  154 (370)
                      ||++|+        +|||+|+.||||||+|++.++.. +++.|.+    ......++++++||+|+|+|+|++||++||+
T Consensus        90 t~~~~~--------~~~~~~~~le~el~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~LvIgI~Sap~~~~RR~AIR~  160 (408)
T PLN03193         90 THNAIQ--------TLDKTISNLEMELAAARAAQESI-LNGSPISEDLKKTQSSGKRRYLMVVGINTAFSSRKRRDSVRA  160 (408)
T ss_pred             HHHHHH--------HHhhhhhHHhHHHHHHHhhhhhh-ccCCCccccccccCCCCcceEEEEEEEeCCCCCHHHHHHHHH
Confidence            999999        99999999999999999977654 4554543    1234567789999999999999999999999


Q ss_pred             HhccCchhhHhhhccCceEEEEEeecCCCCChhHHHHHHHHHhhCCCEEEeccccccccchhHHHHHHHHHHhcCCceEE
Q 017533          155 TWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFY  234 (370)
Q Consensus       155 TW~~~~~~l~~l~~~~~i~v~FVvG~s~~~~~~~~~~I~~E~~~~~DIL~ld~~Dsy~nLt~Kt~~~~~wa~~~~~a~F~  234 (370)
                      |||++++.+.+++.+.+|+++||+|++.++++.++++|++|+++|||||++||+|+|+|||.||+++|+||.++|+++||
T Consensus       161 TWg~~~~~~~kle~~~gv~vrFVIG~s~~~~~~ldr~Le~Ea~~ygDIL~lDfvDsY~NLT~KTl~~f~wA~~~~dAkF~  240 (408)
T PLN03193        161 TWMPQGEKRKKLEEEKGIIIRFVIGHSATSGGILDRAIEAEDRKHGDFLRLDHVEGYLELSAKTKTYFATAVAMWDADFY  240 (408)
T ss_pred             HHcCCcccccccccCCcEEEEEEeecCCCcchHHHHHHHHHHHHhCCEEEEecccccccchHHHHHHHHHHHHcCCCeEE
Confidence            99999877777777899999999999987678899999999999999999999999999999999999999999999999


Q ss_pred             EEecCceeecHHHHHHHHhhcCCCCceEEEEeecCcccccCCCccccCCccccCCCCCccCccccCCeeeecHHHHHHHH
Q 017533          235 VKVDDDVHVNLGMLATTLSRHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYIS  314 (370)
Q Consensus       235 lKvDDDvfVnl~~L~~~L~~~~~~~~lYiG~~~~~pv~rd~~~K~~~pe~w~f~y~~~~Yp~Y~~G~~YvlSrdla~~I~  314 (370)
                      +|+|||+|||+++|+.+|..++.++++|+|||+++|++.+++.|||+|++|+|+++++.|||||+|++||||+|+|++|+
T Consensus       241 mK~DDDvfVnv~~L~~~L~~~~~~~rlYiG~m~~gPvr~~~~~ky~epe~w~~~~~~~~YPpyAsG~gYVlS~DLa~~I~  320 (408)
T PLN03193        241 VKVDDDVHVNIATLGETLVRHRKKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGENGNKYFRHATGQLYAISKDLASYIS  320 (408)
T ss_pred             EEcCCCceEcHHHHHHHHHhcCCCCCEEEEecccCccccCCCCcCcCcccccccCccccCCCCCCcceEEehHHHHHHHH
Confidence            99999999999999999998877889999999989987778899999999999999999999999999999999999999


Q ss_pred             HhCCCcCCCCcchHHHHHHHhcCCCeEecCCCceeCCCCCcccccCcCCccccc
Q 017533          315 INQPILHKFANEDVSLGSWFIGLEVEHIDDRNMCCQTPPGNVSKKDDLLFCLLL  368 (370)
Q Consensus       315 ~~~~~l~~~~~EDV~lG~~l~gL~v~~id~~~fc~~~~~dce~k~~~~~~c~~~  368 (370)
                      .++..++.|++|||++|+|+.||+|+|+|+++|||++||+||||+++|++|++.
T Consensus       321 ~n~~~L~~y~~EDV~vG~Wl~~L~V~~vdd~~fcc~~~~~C~~~~~~~~~c~~~  374 (408)
T PLN03193        321 INQHVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNICVAS  374 (408)
T ss_pred             hChhhhcccCcchhhhhhHhccCCceeeecccccCCCCccccccccCCCeeEEE
Confidence            999999999999999999999999999999999999999999999999999986

>KOG2288 consensus Galactosyltransferases [Carbohydrate transport and metabolism]

Probab=100.00  E-value=5.6e-66  Score=481.10  Aligned_cols=231  Identities=68%  Similarity=1.114  Sum_probs=224.2

Q ss_pred             CCCeEEEEEEECCCCCHHHHHHHHHHhccCchhhHhhhccCceEEEEEeecCCCCChhHHHHHHHHHhhCCCEEEec-cc
Q 017533          130 RPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLE-HI  208 (370)
Q Consensus       130 ~~~~~llI~V~S~~~~~~rR~aIR~TW~~~~~~l~~l~~~~~i~v~FVvG~s~~~~~~~~~~I~~E~~~~~DIL~ld-~~  208 (370)
                      +++++++|+|.|+|++.+||+++|+|||++++.+++++++++|.++||||+ ++.+++.+++|++|+++|+|+|.+| ++
T Consensus         8 ~~k~l~vigI~T~f~s~~RR~~vR~TWmp~~~~l~rle~e~gv~~RFvIG~-~~~g~~~~r~ie~E~~~~~DfllLd~h~   86 (274)
T KOG2288|consen    8 RRKVLLVIGINTAFSSRKRRDSVRQTWMPSGEGLKRLEEEKGVIIRFVIGT-ATLGASLDRALEEENAQHGDFLLLDRHE   86 (274)
T ss_pred             ccceEEEEEeecccchhhhHHHHHHhhcCCccchhhhccccceEEEEEecc-CCccHHHHHHHHHHHHhcCCeEeechhH
Confidence            779999999999999999999999999999999999999999999999999 4468999999999999999999999 99


Q ss_pred             cccccchhHHHHHHHHHHhcCCceEEEEecCceeecHHHHHHHHhhcCCCCceEEEEeecCcccccCCCccccCCccccC
Q 017533          209 EGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFG  288 (370)
Q Consensus       209 Dsy~nLt~Kt~~~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~~L~~~~~~~~lYiG~~~~~pv~rd~~~K~~~pe~w~f~  288 (370)
                      |+|++|+.||+.+|.+|+++|+++||+|+|||+|||++.|...|++++.+|++|||||++|||+.++++|||+|+ |+|+
T Consensus        87 E~Y~~Ls~Kt~~~f~~A~~~~daeFyvKvDDDv~v~l~~L~~~la~~r~~pr~YiGcmksg~v~~~~~~kw~Epe-Wkfg  165 (274)
T KOG2288|consen   87 EAYEELSAKTKAFFSAAVAHWDAEFYVKVDDDVYVRLARLGTLLARERSHPRLYIGCMKSGPVLTQPGGKWYEPE-WKFG  165 (274)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccceEEEEccccceecHHHHHHHHHhhccCCceEEEEecCCccccCCCCcccChh-hhcC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999 9999


Q ss_pred             CCCCccCccccCCeeeecHHHHHHHHHhCCCcCCCCcchHHHHHHHhcCCCeEecCCCceeCCCCCcccccCcCCccccc
Q 017533          289 EEGNKYFRHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWFIGLEVEHIDDRNMCCQTPPGNVSKKDDLLFCLLL  368 (370)
Q Consensus       289 y~~~~Yp~Y~~G~~YvlSrdla~~I~~~~~~l~~~~~EDV~lG~~l~gL~v~~id~~~fc~~~~~dce~k~~~~~~c~~~  368 (370)
                      +.++ |+||+.|++|+||++||++|++|+..++.|.+|||++|.|++||+|+|+||+++||+++     |++++++|++.
T Consensus       166 ~~g~-YfrhA~G~~YvlS~dLa~yi~in~~lL~~y~nEDVSlGaW~~gldV~h~dd~rlC~~~~-----~~~~~~~~~~~  239 (274)
T KOG2288|consen  166 DNGN-YFRHATGGGYVLSKDLATYISINRQLLHKYANEDVSLGAWMIGLDVEHVDDPRLCCSTP-----KALAGMVCAAS  239 (274)
T ss_pred             cccc-cchhccCceEEeeHHHHHHHHHhHHHHHhhccCCcccceeeeeeeeeEecCCcccccch-----hhhccceeeee
Confidence            8877 99999999999999999999999999999999999999999999999999999999886     89999999875

>PLN03133 beta-1,3-galactosyltransferase; Provisional

Probab=100.00  E-value=4.6e-49  Score=411.57  Aligned_cols=213  Identities=23%  Similarity=0.351  Sum_probs=191.6

Q ss_pred             CCCCCeEEEEEEECCCCCHHHHHHHHHHhccCchhhHhhhccCceEEEEEeecCCCCChhHHHHHHHHHhhCCCEEEecc
Q 017533          128 SRRPKVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEH  207 (370)
Q Consensus       128 ~~~~~~~llI~V~S~~~~~~rR~aIR~TW~~~~~~l~~l~~~~~i~v~FVvG~s~~~~~~~~~~I~~E~~~~~DIL~ld~  207 (370)
                      .+.++++|||+|+|+|+|++||++||+|||+...     ..+..++++|++|.+.  ++.++.+|.+|+++|||||++||
T Consensus       380 ~~~~~~~LlI~V~Sap~nf~rR~AIR~TWg~~~~-----~~~~~v~~rFvVG~s~--n~~l~~~L~~Ea~~ygDIIq~dF  452 (636)
T PLN03133        380 SPKKPLDLFIGVFSTANNFKRRMAVRRTWMQYDA-----VRSGAVAVRFFVGLHK--NQMVNEELWNEARTYGDIQLMPF  452 (636)
T ss_pred             CCCCceEEEEEEeCCcccHHHHHHHHHhhccccc-----cCCCceEEEEEEecCC--cHHHHHHHHHHHHHcCCeEEEee
Confidence            3456799999999999999999999999998642     2345689999999986  46789999999999999999999


Q ss_pred             ccccccchhHHHHHHHHHHhcCCceEEEEecCceeecHHHHHHHHhhcCCCCceEEEEee-cCcccccCCCccccCCccc
Q 017533          208 IEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRHRSKPRVYIGCMK-SGPVLSQKNVKYHEPEYWK  286 (370)
Q Consensus       208 ~Dsy~nLt~Kt~~~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~~L~~~~~~~~lYiG~~~-~~pv~rd~~~K~~~pe~w~  286 (370)
                      +|+|+|||+||++++.|+..|++++|++|+|||+|||+++|+.+|......+++|+|++. ...|+|++.+|||+|.+  
T Consensus       453 ~DsY~NLTlKtl~~~~wa~~c~~akFilK~DDDvFVnv~~Ll~~L~~~~~~~~Ly~G~v~~~~~PiRd~~sKWYVs~~--  530 (636)
T PLN03133        453 VDYYSLITWKTLAICIFGTEVVSAKYVMKTDDDAFVRVDEVLASLKRTNVSHGLLYGLINSDSQPHRNPDSKWYISPE--  530 (636)
T ss_pred             echhhhhHHHHHHHHHHHHhCCCceEEEEcCCceEEcHHHHHHHHHhcCCCCceEEEEeccCCCcccCCCCCCCCCHH--
Confidence            999999999999999999988999999999999999999999999877667789999986 45788999999999865  


Q ss_pred             cCCCCCccCccccCCeeeecHHHHHHHHHhC--CCcCCCCcchHHHHHHHh-----cCCCeEecCCCceeC
Q 017533          287 FGEEGNKYFRHATGQIYAISKDLATYISINQ--PILHKFANEDVSLGSWFI-----GLEVEHIDDRNMCCQ  350 (370)
Q Consensus       287 f~y~~~~Yp~Y~~G~~YvlSrdla~~I~~~~--~~l~~~~~EDV~lG~~l~-----gL~v~~id~~~fc~~  350 (370)
                       .||++.|||||+|++||||+|+|++|+.++  ..++.|++||||+|+|+.     |+.+.+.++.+||+.
T Consensus       531 -eyp~~~YPpYasG~gYVlS~Dla~~L~~~s~s~~l~~f~lEDVyvGi~l~~l~k~gl~v~~~~~~r~~~~  600 (636)
T PLN03133        531 -EWPEETYPPWAHGPGYVVSRDIAKEVYKRHKEGRLKMFKLEDVAMGIWIAEMKKEGLEVKYENDGRIYNE  600 (636)
T ss_pred             -HCCCCCCCCCCCcCEEEEcHHHHHHHHHhhhhcccCcCChhhHhHHHHHHHhcccCCCceeeCCCcccCC
Confidence             567899999999999999999999998764  589999999999999984     788999999999864

>KOG2287 consensus Galactosyltransferases [Carbohydrate transport and metabolism]

Probab=100.00  E-value=6.7e-47  Score=375.75  Aligned_cols=207  Identities=25%  Similarity=0.349  Sum_probs=190.6

Q ss_pred             CeEEEEEEECCCCCHHHHHHHHHHhccCchhhHhhhccCceEEEEEeecCCCCChhHHHHHHHHHhhCCCEEEecccccc
Q 017533          132 KVFVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGY  211 (370)
Q Consensus       132 ~~~llI~V~S~~~~~~rR~aIR~TW~~~~~~l~~l~~~~~i~v~FVvG~s~~~~~~~~~~I~~E~~~~~DIL~ld~~Dsy  211 (370)
                      .++++++|.|++++++||++||+|||+...     ..+..++++|++|.+++.+ .+++.|.+|++.|||||+.||.|+|
T Consensus        94 ~~~lLl~V~S~~~~farR~aiR~TW~~~~~-----v~~~~v~~~FLvG~~~~~~-~~~~~l~~Ea~~ygDIi~~df~Dty  167 (349)
T KOG2287|consen   94 PPELLLLVKSAPDNFARRNAIRKTWGNENN-----VRGGRVRVLFLVGLPSNED-KLNKLLADEARLYGDIIQVDFEDTY  167 (349)
T ss_pred             CceEEEEEecCCCCHHHHHHHHHHhcCccc-----cCCCcEEEEEEecCCCcHH-HHHHHHHHHHHHhCCEEEEecccch
Confidence            489999999999999999999999999873     3577899999999987544 6689999999999999999999999


Q ss_pred             ccchhHHHHHHHHHHh-cCCceEEEEecCceeecHHHHHHHHhhc-CCCCceEEEEee-cCcccccCCCccccCCccccC
Q 017533          212 HELSAKTKIFFSTAVA-KWDADFYVKVDDDVHVNLGMLATTLSRH-RSKPRVYIGCMK-SGPVLSQKNVKYHEPEYWKFG  288 (370)
Q Consensus       212 ~nLt~Kt~~~~~wa~~-~~~a~F~lKvDDDvfVnl~~L~~~L~~~-~~~~~lYiG~~~-~~pv~rd~~~K~~~pe~w~f~  288 (370)
                      .|||+||++++.|+.+ |++++|++|+|||+|||+++|..+|..+ .+.+++|.|.+. ..+|+|++.+|||+|+.   .
T Consensus       168 ~nltlKtl~~l~w~~~~cp~akfi~K~DDDvfv~~~~L~~~L~~~~~~~~~~~~G~v~~~~~p~R~~~~KwyVp~~---~  244 (349)
T KOG2287|consen  168 FNLTLKTLAILLWGVSKCPDAKFILKIDDDVFVNPDNLLEYLDKLNDPSSDLYYGRVIQNAPPIRDKTSKWYVPES---E  244 (349)
T ss_pred             hchHHHHHHHHHHHHhcCCcceEEEeccCceEEcHHHHHHHHhccCCCCcceEEEeecccCCCCCCCCCCCccCHH---H
Confidence            9999999999999998 5789999999999999999999999998 778899999976 46889999999999987   7


Q ss_pred             CCCCccCccccCCeeeecHHHHHHHHHhCCCcCCCCcchHHHHHHHhcC-CCeEecCCCc
Q 017533          289 EEGNKYFRHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWFIGL-EVEHIDDRNM  347 (370)
Q Consensus       289 y~~~~Yp~Y~~G~~YvlSrdla~~I~~~~~~l~~~~~EDV~lG~~l~gL-~v~~id~~~f  347 (370)
                      |+.+.||+||+|++|+||+++|+.|+.++..++.++.|||++|+|+..+ ++.+++...|
T Consensus       245 y~~~~YP~Y~sG~gYvis~~~a~~l~~~s~~~~~~~iEDV~~g~~l~~~~gi~~~~~~~~  304 (349)
T KOG2287|consen  245 YPCSVYPPYASGPGYVISGDAARRLLKASKHLKFFPIEDVFVGGCLAEDLGIKPVNHPGF  304 (349)
T ss_pred             CCCCCCCCcCCCceeEecHHHHHHHHHHhcCCCccchHHHHHHHHHHHhcCCCcccCccc
Confidence            8889999999999999999999999999999999999999999999776 8888876653

>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=100.00  E-value=5.9e-47  Score=346.00  Aligned_cols=191  Identities=29%  Similarity=0.414  Sum_probs=172.5

Q ss_pred             HHHHHHHHHhccCchhhHhhhccCceEEEEEeecCCCCChhHHHHHHHHHhhCCCEEEeccccccccchhHHHHHHHHHH
Q 017533          147 KRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAV  226 (370)
Q Consensus       147 ~rR~aIR~TW~~~~~~l~~l~~~~~i~v~FVvG~s~~~~~~~~~~I~~E~~~~~DIL~ld~~Dsy~nLt~Kt~~~~~wa~  226 (370)
                      +||++||+||++...     ....+++++||+|.+++.+..++..|.+|+++|+|||++||.|+|+|||+||+++++|+.
T Consensus         1 ~rR~~IR~TW~~~~~-----~~~~~~~~~FvvG~~~~~~~~~~~~l~~E~~~y~Dil~~d~~D~y~nlt~K~~~~~~w~~   75 (195)
T PF01762_consen    1 ERRQAIRETWGNQRN-----FKGVRVKVVFVVGESPNSDSDLQEALQEEAEKYGDILQGDFVDSYRNLTLKTLAGLKWAS   75 (195)
T ss_pred             ChHHHHHHHHhcccc-----cCCCcEEEEEEEecCCCCcHHHHHHhhhhhhhcCceEeeecccccchhhHHHHHHHHHHH
Confidence            589999999999863     245899999999999855678888999999999999999999999999999999999999


Q ss_pred             hcC-CceEEEEecCceeecHHHHHHHHhhc---CCCCceEEEEeecCcccccCCCccccCCccccCCCCCccCccccCCe
Q 017533          227 AKW-DADFYVKVDDDVHVNLGMLATTLSRH---RSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKYFRHATGQI  302 (370)
Q Consensus       227 ~~~-~a~F~lKvDDDvfVnl~~L~~~L~~~---~~~~~lYiG~~~~~pv~rd~~~K~~~pe~w~f~y~~~~Yp~Y~~G~~  302 (370)
                      ++| +++|++|+|||+|||+++|.++|...   .....+|.+++..+++++++.+|||+|+.   .|+.+.|||||+|++
T Consensus        76 ~~c~~~~~v~k~DDD~~vn~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~r~~~~kw~v~~~---~y~~~~yP~y~~G~~  152 (195)
T PF01762_consen   76 KHCPNAKYVLKVDDDVFVNPDRLVSFLKSLKQDPSKNSIYGGCIKNGPPIRDPSSKWYVSEE---EYPDDYYPPYCSGGG  152 (195)
T ss_pred             hhCCchhheeecCcEEEEehHHhhhhhhhcccCccccccccccccCCccccccccCceeeee---ecccccCCCcCCCCe
Confidence            976 59999999999999999999999987   23345665567778899999999999976   567889999999999


Q ss_pred             eeecHHHHHHHHHhCCCcCCCCcchHHHHHHHhcCCCeEecCC
Q 017533          303 YAISKDLATYISINQPILHKFANEDVSLGSWFIGLEVEHIDDR  345 (370)
Q Consensus       303 YvlSrdla~~I~~~~~~l~~~~~EDV~lG~~l~gL~v~~id~~  345 (370)
                      |+||+++|+.|+.++..++.+++|||++|+|+.+++++++|++
T Consensus       153 yvls~~~v~~i~~~~~~~~~~~~eDv~iGi~~~~~~i~~~~~~  195 (195)
T PF01762_consen  153 YVLSSDVVKRIYKASSHTPFFPLEDVFIGILAEKLGIKPIHDP  195 (195)
T ss_pred             EEecHHHHHHHHHHhhcCCCCCchHHHHHHHHHHCCCCccCCC
Confidence            9999999999999999999999999999999999999999863

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane

>PTZ00210 UDP-GlcNAc-dependent glycosyltransferase; Provisional

Probab=99.97  E-value=1.1e-30  Score=257.33  Aligned_cols=191  Identities=20%  Similarity=0.308  Sum_probs=156.7

Q ss_pred             CCCCCeEEEEEEECCCCC--HHHHHHHHHHhccCchhhHh-hhccCceEEEEEeecCCCCChhHHHHHHHHHhhCCCEEE
Q 017533          128 SRRPKVFVVIGINTAFSS--RKRRDSVRDTWMPQGEKLIQ-LEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLR  204 (370)
Q Consensus       128 ~~~~~~~llI~V~S~~~~--~~rR~aIR~TW~~~~~~l~~-l~~~~~i~v~FVvG~s~~~~~~~~~~I~~E~~~~~DIL~  204 (370)
                      -.+++.++++||.|..++  +.||++.|+||........+ ..-...+.++|++|..++.+-+.+.++.+|+++|||||+
T Consensus        75 w~~~~~lv~~Gi~S~d~~~r~~rR~lqr~t~w~y~~va~~~n~ftg~~lv~y~l~~H~~~~~~~~~~L~eEA~~~~DIVi  154 (382)
T PTZ00210         75 WKAQRFLAVLGIPSVDNSERSRRRDLQRQTCWKYSGVATRSNNFSGSLLPLYLLAPHQSNSYLISHSLKEEAARTHDIIT  154 (382)
T ss_pred             hccCCceEEEeccCCCchHHHHHHHHHHhhhhcchhhhhhccCCchhhhhhhhhccCCccchhhhHHHHHHHHHhCCEEE
Confidence            457788999999999988  89999999999987642211 111356678999999987677999999999999999999


Q ss_pred             ecc------------------ccccccchhHHHHHHHHHHhcC-CceEEEEecCceeecHHHHHHHHhhcCCCCceEEEE
Q 017533          205 LEH------------------IEGYHELSAKTKIFFSTAVAKW-DADFYVKVDDDVHVNLGMLATTLSRHRSKPRVYIGC  265 (370)
Q Consensus       205 ld~------------------~Dsy~nLt~Kt~~~~~wa~~~~-~a~F~lKvDDDvfVnl~~L~~~L~~~~~~~~lYiG~  265 (370)
                      +||                  .|++.++|+||+++++||...+ +++|++|+|||+|||++.+++.|+.. +...+|+|.
T Consensus       155 lpf~d~~~tTnKkiG~~g~WG~e~e~~mT~KT~l~~~wA~~~cP~a~YImKgDDDvFVrVp~lL~~Lr~~-prr~LY~G~  233 (382)
T PTZ00210        155 LPTNDVSPSTRKKIGENGNWGIEAEVAMSRKTYLWLRFALHMFPNVSYIVKGDDDIFIRVPKYLADLRVM-PRHGLYMGR  233 (382)
T ss_pred             EecccCccccccccccCCcccchhhcchhHHHHHHHHHHHHhCCCCCeEEEcCCCeEeeHHHHHHHHhhC-CCCceEEEe
Confidence            999                  6777889999999999999964 99999999999999999999999765 445699998


Q ss_pred             eecC-cccccCCCccccCCccccCCCCCccCccccCCeeeecHHHHHHHHHhCCC--c---------------CCCCcch
Q 017533          266 MKSG-PVLSQKNVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISINQPI--L---------------HKFANED  327 (370)
Q Consensus       266 ~~~~-pv~rd~~~K~~~pe~w~f~y~~~~Yp~Y~~G~~YvlSrdla~~I~~~~~~--l---------------~~~~~ED  327 (370)
                      +... .+.                  .+.+||||+|++|+||+|+|+.|+...+.  +               -.+.+||
T Consensus       234 v~~~~~p~------------------Rd~~PpY~~G~gYvLSrDVA~~Lvs~~pl~rL~~~pys~~~~~~y~~~~~~~ED  295 (382)
T PTZ00210        234 YNYYNRIW------------------RRNQLTYVNGYCITLSRDTAQAIISYKPLERLVNMPFSMWDYFDFLDLGMFYED  295 (382)
T ss_pred             eCCCCccc------------------cCCCCCccccceeeccHHHHHHHHhhChHhHhhcCCCchHHHHHHHHhhcCchH
Confidence            6421 111                  12479999999999999999999987543  1               2457999


Q ss_pred             HHHHHHH-hcC
Q 017533          328 VSLGSWF-IGL  337 (370)
Q Consensus       328 V~lG~~l-~gL  337 (370)
                      +.+|.|+ .++
T Consensus       296 iMvG~vLr~~~  306 (382)
T PTZ00210        296 VMVGMILREKV  306 (382)
T ss_pred             HHHHHHHHHhc
Confidence            9999999 444

>PF13334 DUF4094: Domain of unknown function (DUF4094)

Probab=99.95  E-value=3.4e-29  Score=205.19  Aligned_cols=91  Identities=42%  Similarity=0.705  Sum_probs=82.5

Q ss_pred             cchhHHHHHHHHHHHHHHHhcCCCCCCCCCCCCccc-cccccchhhcccccchhcc---CCchHHHHHHHhhhcccccCC
Q 017533           12 STKWIPFVCLFCFALGILFSNLTWNPPESDGRPSLN-VRRREQQVAVASTDCAKKA---FQDQDVAKEVLKTRGAIHDGS   87 (370)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~   87 (370)
                      |+||+++||+||||+|+|||||||..||+.+ +.+. .+..+++++++++||++++   ++.+|+|+||+|||++||   
T Consensus         1 S~kw~l~Lc~~SF~~G~lft~R~W~~pe~~~-~~~~~~~~~~~~l~l~s~~c~~k~~~~~~~~di~~eV~kTh~aIq---   76 (95)
T PF13334_consen    1 SRKWVLLLCIASFCAGMLFTNRMWTVPESKE-ISRRSSQDAEERLQLVSEDCDPKKLKESDQRDIMGEVSKTHEAIQ---   76 (95)
T ss_pred             CchHHHHHHHHHHHHHHHHhcccccCCcccc-chhhhccccccccccccccccccccccCCccchhHHHHHHHHHHH---
Confidence            6799999999999999999999999999987 5443 4577899999999999654   788999999999999999   


Q ss_pred             cccchhhhhhHHhhhhhhcccccC
Q 017533           88 VESDRTLDKTIGQLQMELAASRSG  111 (370)
Q Consensus        88 ~~~~~~~~~~~~~l~~el~~~~~~  111 (370)
                           +|||+||+||||||+||++
T Consensus        77 -----~LdKtIS~LEMELAaARa~   95 (95)
T PF13334_consen   77 -----SLDKTISSLEMELAAARAE   95 (95)
T ss_pred             -----HHHHHHHHHHHHHHHHhcC
Confidence                 9999999999999999973

>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []

Probab=99.77  E-value=2.3e-18  Score=164.39  Aligned_cols=192  Identities=19%  Similarity=0.242  Sum_probs=98.8

Q ss_pred             EEEEEEECCCCCH-HHHHHHHHHhccCchhhHhhhccCceEEEEEeecCCCCChhHHHHHHHHHhhCCCEEEeccccccc
Q 017533          134 FVVIGINTAFSSR-KRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYH  212 (370)
Q Consensus       134 ~llI~V~S~~~~~-~rR~aIR~TW~~~~~~l~~l~~~~~i~v~FVvG~s~~~~~~~~~~I~~E~~~~~DIL~ld~~Dsy~  212 (370)
                      .++|+|+|++++. .|-.+|++||++....         .  .|+....+      +..+..+  ...+++.-+...++.
T Consensus         7 dI~i~V~T~~k~h~tR~~~I~~TW~~~~~~---------~--~~ifsd~~------d~~l~~~--~~~~l~~~~~~~~~~   67 (252)
T PF02434_consen    7 DIFIAVKTTKKFHKTRAPAIKQTWAKRCNK---------Q--TFIFSDAE------DPSLPTV--TGVHLVNPNCDAGHC   67 (252)
T ss_dssp             GEEEEEE--GGGTTTTHHHHHHTGGGGSGG---------G--EEEEESS--------HHHHHH--HGGGEEE--------
T ss_pred             cEEEEEEeCHHHHHHHHHHHHHHHHhhcCC---------c--eEEecCcc------ccccccc--cccccccCCCcchhh
Confidence            6899999999865 5668999999998741         1  24322221      2233333  223454444444443


Q ss_pred             cchhHHHHHHHHHHh-cCCceEEEEecCceeecHHHHHHHHhhcCCCCceEEEEeec-CcccccCCCccccCCccccCCC
Q 017533          213 ELSAKTKIFFSTAVA-KWDADFYVKVDDDVHVNLGMLATTLSRHRSKPRVYIGCMKS-GPVLSQKNVKYHEPEYWKFGEE  290 (370)
Q Consensus       213 nLt~Kt~~~~~wa~~-~~~a~F~lKvDDDvfVnl~~L~~~L~~~~~~~~lYiG~~~~-~pv~rd~~~K~~~pe~w~f~y~  290 (370)
                      ..+++.++.+.+... ..+++|++++|||+||++++|..+|..+++..++|+|+... .+...-.......+        
T Consensus        68 ~~~~~~~~~~~y~~~~~~~~~Wf~~~DDDtyv~~~~L~~~L~~~~~~~~~yiG~~~~~~~~~~~~~~~~~~~--------  139 (252)
T PF02434_consen   68 RKTLSCKMAYEYDHFLNSDKDWFCFADDDTYVNVENLRRLLSKYDPSEPIYIGRPSGDRPIEIIHRFNPNKS--------  139 (252)
T ss_dssp             -----HHHHHHHHHHHHHT-SEEEEEETTEEE-HHHHHHHHTTS-TTS--EEE-EE------------------------
T ss_pred             HHHHHHHHHHHHHhhhcCCceEEEEEeCCceecHHHHHHHHhhCCCccCEEeeeeccCccceeecccccccc--------
Confidence            334444444444222 35889999999999999999999999999999999998542 22211000000000        


Q ss_pred             CCccCccc-cCCeeeecHHHHHHHHH---hCCCcCCC----CcchHHHHHHHhc-CCCeEecCCCceeCCC
Q 017533          291 GNKYFRHA-TGQIYAISKDLATYISI---NQPILHKF----ANEDVSLGSWFIG-LEVEHIDDRNMCCQTP  352 (370)
Q Consensus       291 ~~~Yp~Y~-~G~~YvlSrdla~~I~~---~~~~l~~~----~~EDV~lG~~l~g-L~v~~id~~~fc~~~~  352 (370)
                      ...-..|+ +|+||+||+.++++|..   ........    ..||+.+|.|+.. |+|..+|...|+.-.+
T Consensus       140 ~~~~~~f~~GGaG~vlSr~~~~k~~~~~~~~~~~~~~~~~~~~dD~~lG~ci~~~lgv~lt~s~~fhs~~~  210 (252)
T PF02434_consen  140 KDSGFWFATGGAGYVLSRALLKKMSPWASGCKCPSTDEKIRLPDDMTLGYCIENLLGVPLTHSPLFHSHLE  210 (252)
T ss_dssp             ------EE-GGG-EEEEHHHHHHHHHHHTT-TTS--TTTTTS-HHHHHHHHHHHTT---EEE-TT---SSS
T ss_pred             CcCceEeeCCCeeHHHhHHHHHHHhhhcccccccCCcCCCCCcccChhhhhHHhcCCcceeechhhcccCc
Confidence            11223455 57899999999999954   22222222    3899999999988 9999999999966443

It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.

>KOG2246 consensus Galactosyltransferases [Carbohydrate transport and metabolism]

Probab=99.58  E-value=1.2e-14  Score=145.53  Aligned_cols=170  Identities=22%  Similarity=0.293  Sum_probs=130.4

Q ss_pred             CCCCCeEEEEEEECCCCCHH-HHHHHHHHhccCchhhHhhhccCceEEEEEe---ecCCCCChhHHHHHHHHHhhCCCEE
Q 017533          128 SRRPKVFVVIGINTAFSSRK-RRDSVRDTWMPQGEKLIQLEREKGIIIRFMI---GHSATSNSILDKAIDSEDAQHKDFL  203 (370)
Q Consensus       128 ~~~~~~~llI~V~S~~~~~~-rR~aIR~TW~~~~~~l~~l~~~~~i~v~FVv---G~s~~~~~~~~~~I~~E~~~~~DIL  203 (370)
                      -..++..+++.|.|++.+.. |-+.+-+||++.++           +..|+-   .+.              ...+. .|
T Consensus        86 ~l~r~~~v~cwv~t~~~~~~~~~~~v~~TW~~rc~-----------~~~f~s~~~s~~--------------~~~f~-~v  139 (364)
T KOG2246|consen   86 WLSRSGRVLCWVLTSPMRHVTRADAVKETWLKRCD-----------KGIFFSPTLSKD--------------DSRFP-TV  139 (364)
T ss_pred             ccCCCceEEEEEEecCcCceeehhhhhcccccccC-----------cceecCccCCCC--------------CCcCc-ee
Confidence            34677899999999988765 55799999999875           223443   222              11222 33


Q ss_pred             EeccccccccchhHHHHHHHHHHhc--CCceEEEEecCceeecHHHHHHHHhhcCCCCceEEEEeecCcccccCCCcccc
Q 017533          204 RLEHIEGYHELSAKTKIFFSTAVAK--WDADFYVKVDDDVHVNLGMLATTLSRHRSKPRVYIGCMKSGPVLSQKNVKYHE  281 (370)
Q Consensus       204 ~ld~~Dsy~nLt~Kt~~~~~wa~~~--~~a~F~lKvDDDvfVnl~~L~~~L~~~~~~~~lYiG~~~~~pv~rd~~~K~~~  281 (370)
                      ..+..|+|+++..||..+++++.++  -+++|++|+|||||+.+++|..+|..+++++.+|+|+...          -|.
T Consensus       140 ~~~~~~g~~~~~~ktr~~~~yv~~~~~~~~dWf~~aDDDTy~i~eNLr~~L~~yDp~~p~YiG~~~~----------~~~  209 (364)
T KOG2246|consen  140 YYNLPDGYRSLWRKTRIAFKYVYDHILKDYDWFLKADDDTYFIMENLRYVLSKYDPEKPVYLGYRSK----------SYF  209 (364)
T ss_pred             eccCCcchHHHHHHHHHHHHHHHHhccCCCCeEEeccCCeEEeHHHHHHHHhhcCCCCcEEeccccc----------ccc
Confidence            6888999999999999999999865  4899999999999999999999999999999999998421          111


Q ss_pred             CCccccCCCCCccCccccCCeeeecHHHHHHHHHh----CC-CcCCCC--cchHHHHHHHhcCCCeEecC
Q 017533          282 PEYWKFGEEGNKYFRHATGQIYAISKDLATYISIN----QP-ILHKFA--NEDVSLGSWFIGLEVEHIDD  344 (370)
Q Consensus       282 pe~w~f~y~~~~Yp~Y~~G~~YvlSrdla~~I~~~----~~-~l~~~~--~EDV~lG~~l~gL~v~~id~  344 (370)
                               .+.|-  -+|++|++|+.+.+.++..    .. ....+.  .||+-+|.|+..+||...|+
T Consensus       210 ---------~~~y~--~g~ag~~ls~aa~~~la~~l~~~~~~C~~~~~~~~eD~~i~~Cl~~~GV~~~d~  268 (364)
T KOG2246|consen  210 ---------QNGYS--SGGAGYVLSFAALRRLAERLLNNEDKCPQRYPSYGEDRRIGRCLAEVGVPATDE  268 (364)
T ss_pred             ---------ccccc--cCCCCcceeHHHHHHHHHHHhcchhhcccccCCchhHHHHHHHHHHhCCCccCc
Confidence                     11222  3788999999988887653    22 334444  99999999999999998876

>PLN03153 hypothetical protein; Provisional

Probab=99.01  E-value=6.8e-09  Score=107.14  Aligned_cols=184  Identities=18%  Similarity=0.161  Sum_probs=113.0

Q ss_pred             CCCeEEEEEEECCCCCH-HHHHHHHHHhccCchhhHhhhccCceEEEEEeecCCCCChhHHHHHHHHHhhCCCEEE-ec-
Q 017533          130 RPKVFVVIGINTAFSSR-KRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLR-LE-  206 (370)
Q Consensus       130 ~~~~~llI~V~S~~~~~-~rR~aIR~TW~~~~~~l~~l~~~~~i~v~FVvG~s~~~~~~~~~~I~~E~~~~~DIL~-ld-  206 (370)
                      ..--.++++|.++.+.. +|+..|+.+|.+..-        .  ..+|+.....+.  .       +...---|-+ .| 
T Consensus       119 t~~~hIvF~I~~s~~~w~~R~~yik~wW~p~~~--------r--g~v~ld~~~~~~--~-------~~~~~P~i~is~d~  179 (537)
T PLN03153        119 LSLNHIMFGIAGSSQLWKRRKELVRLWWRPNQM--------R--GHVWLEEQVSPE--E-------GDDSLPPIMVSEDT  179 (537)
T ss_pred             CccccEEEEEEEchhhhhhhhhhhhhhcCcccc--------e--eEEEecccCCCC--C-------CcCCCCCEEeCCCc
Confidence            33447888888887765 577999999998531        1  233443332110  0       0000000111 01 


Q ss_pred             --cc-cccccchhHHHH--HHHHHHh--cCCceEEEEecCceeecHHHHHHHHhhcCCCCceEEEEeecCcccccCCCcc
Q 017533          207 --HI-EGYHELSAKTKI--FFSTAVA--KWDADFYVKVDDDVHVNLGMLATTLSRHRSKPRVYIGCMKSGPVLSQKNVKY  279 (370)
Q Consensus       207 --~~-Dsy~nLt~Kt~~--~~~wa~~--~~~a~F~lKvDDDvfVnl~~L~~~L~~~~~~~~lYiG~~~~~pv~rd~~~K~  279 (370)
                        |. ++..+......+  +...+..  .++++||+++|||+|+.+++|+..|..+++++..|+|.....-         
T Consensus       180 s~f~y~~~~Gh~sa~rI~rmv~et~~~~~pd~kWfVf~DDDTyf~~~NLv~~Ls~YDptkp~YIGs~Se~~---------  250 (537)
T PLN03153        180 SRFRYTNPTGHPSGLRISRIVLESFRLGLPDVRWFVLGDDDTIFNADNLVAVLSKYDPSEMVYVGGPSESH---------  250 (537)
T ss_pred             ccccccCCCCcHHHHHHHHHHHHHHHhhCCCCCEEEEecCCccccHHHHHHHHhhcCCCCCEEeccccccc---------
Confidence              10 111222222212  3333333  4799999999999999999999999999999999999742100         


Q ss_pred             ccCCccccCCCCCccCcc-ccCCeeeecHHHHHHHHHhCC-CcCCC---CcchHHHHHHHhcCCCeEecCCCcee
Q 017533          280 HEPEYWKFGEEGNKYFRH-ATGQIYAISKDLATYISINQP-ILHKF---ANEDVSLGSWFIGLEVEHIDDRNMCC  349 (370)
Q Consensus       280 ~~pe~w~f~y~~~~Yp~Y-~~G~~YvlSrdla~~I~~~~~-~l~~~---~~EDV~lG~~l~gL~v~~id~~~fc~  349 (370)
                        ...-.|+     | .| -+|+||+||+.+++.|..... ....+   .-+|.-||.|+..++|...++.+|..
T Consensus       251 --~qn~~f~-----~-~fA~GGAG~~LSrPLae~L~~~~d~C~~rY~~~~~gD~rL~~CL~elGV~LT~~~gfhQ  317 (537)
T PLN03153        251 --SANSYFS-----H-NMAFGGGGIAISYPLAEALSRILDDCLDRYPKLYGSDDRLHACITELGVPLSREPGFHQ  317 (537)
T ss_pred             --ccccccc-----c-ccccCCceEEEcHHHHHHHHHHhhhhhhhcccCCCcHHHHHHHHHHcCCCceecCCccc
Confidence              0000011     1 12 489999999999999987532 22222   45888899999989998888888865

>KOG3708 consensus Uncharacterized conserved protein [Function unknown]

Probab=97.55  E-value=0.00015  Score=74.98  Aligned_cols=157  Identities=15%  Similarity=0.160  Sum_probs=102.7

Q ss_pred             EEEEEEECCCCCHHHHHHHHHHhccCchhhHhhhccCceEEEEEeecCCCCChhHHHHHHHHHhhCCCEEEecccccccc
Q 017533          134 FVVIGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHE  213 (370)
Q Consensus       134 ~llI~V~S~~~~~~rR~aIR~TW~~~~~~l~~l~~~~~i~v~FVvG~s~~~~~~~~~~I~~E~~~~~DIL~ld~~Dsy~n  213 (370)
                      .++++|+|.   ..---+|-+|=+..-.           ++.|+.+.+.-.               +|.-++..+..|+.
T Consensus        27 rl~~aVmte---~tlA~a~NrT~ahhvp-----------rv~~F~~~~~i~---------------~~~a~~~~vs~~d~   77 (681)
T KOG3708|consen   27 RLMAAVMTE---STLALAINRTLAHHVP-----------RVHLFADSSRID---------------NDLAQLTNVSPYDL   77 (681)
T ss_pred             HHHHHHHHH---HHHHHHHHHHHHhhcc-----------eeEEeecccccc---------------ccHhhccccCcccc
Confidence            456667772   2555566666665432           566777765421               12223333444444


Q ss_pred             chhHHHH-HHHHHHhc--CCceEEEEecCceeecHHHHHHHHhhcCCCCceEEEEeecCcccccCCCccccCCccccCCC
Q 017533          214 LSAKTKI-FFSTAVAK--WDADFYVKVDDDVHVNLGMLATTLSRHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEE  290 (370)
Q Consensus       214 Lt~Kt~~-~~~wa~~~--~~a~F~lKvDDDvfVnl~~L~~~L~~~~~~~~lYiG~~~~~pv~rd~~~K~~~pe~w~f~y~  290 (370)
                      -..|+.. .+.+..++  -++||++-+-|++|||...|+.++....-+.++|+|.-.                    ...
T Consensus        78 r~~~~~s~vl~~l~~~~~~~YDwFll~~D~tYv~a~~L~~l~~hmsin~dlymGEe~--------------------~~g  137 (681)
T KOG3708|consen   78 RGQKTHSMVLGLLFNMVHNNYDWFLLAKDSTYVNAFVLLRLIDHMSINEDLYMGEEA--------------------EDG  137 (681)
T ss_pred             CccccHHHHHHHHHHhhccccceEEEecCcceecHHHHHHHHhhcccccccccchhh--------------------hCc
Confidence            4455544 45565554  389999999999999999999999988888899999210                    000


Q ss_pred             CCccCccc-cCCeeeecHHHHHHHHHhCCCcC---CCCcchHHHHHHHh---cCCCeEec
Q 017533          291 GNKYFRHA-TGQIYAISKDLATYISINQPILH---KFANEDVSLGSWFI---GLEVEHID  343 (370)
Q Consensus       291 ~~~Yp~Y~-~G~~YvlSrdla~~I~~~~~~l~---~~~~EDV~lG~~l~---gL~v~~id  343 (370)
                      ...    | .|.||++|+.++..+-+|-.-..   .-.-+|+.+|.|++   |++.+..|
T Consensus       138 s~r----C~l~~G~LLS~s~l~~lrnnle~C~~~~lsad~d~~lgrCi~~At~v~C~~~h  193 (681)
T KOG3708|consen  138 SGR----CRLDTGMLLSQSLLHALRNNLEGCRNDILSADPDEWLGRCIQDATGVGCKPLH  193 (681)
T ss_pred             cCc----cccccceeecHHHHHHHHhhHHHhhcccccCCcHHHHHHHHHHhhcCCccchh
Confidence            112    6 48899999999999988743222   22577899999994   56555544

>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A

Probab=96.12  E-value=0.14  Score=46.49  Aligned_cols=126  Identities=14%  Similarity=0.087  Sum_probs=63.1

Q ss_pred             HHHHHHhcCCceEEEEecCceeecHHHHHHHHhhc-CCCCceEEEEeecCcc--cccCCC-----ccccCCccccCCCCC
Q 017533          221 FFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRH-RSKPRVYIGCMKSGPV--LSQKNV-----KYHEPEYWKFGEEGN  292 (370)
Q Consensus       221 ~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~~L~~~-~~~~~lYiG~~~~~pv--~rd~~~-----K~~~pe~w~f~y~~~  292 (370)
                      .+.++.+..+.+|++.+|||+.+..+.|..++..+ .+.-.+..|.+...+.  .-....     .|+... ..+.....
T Consensus        77 a~n~~~~~~~~d~i~~lD~D~~~~p~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  155 (228)
T PF13641_consen   77 ALNEALAAARGDYILFLDDDTVLDPDWLERLLAAFADPGVGAVGGPVFPDNDRNWLTRLQDLFFARWHLRF-RSGRRALG  155 (228)
T ss_dssp             HHHHHHHH---SEEEEE-SSEEE-CHHHHHHHHHHHBSS--EEEEEEEETTCCCEEEE-TT--S-EETTTS--TT-B---
T ss_pred             HHHHHHHhcCCCEEEEECCCcEECHHHHHHHHHHHHhCCCCeEeeeEeecCCCCHHHHHHHHHHhhhhhhh-hhhhcccc
Confidence            45677766789999999999999999998888877 3333343343321110  000000     111100 01111111


Q ss_pred             ccCccccCCeeeecHHHHHHHHHhCCCcCCCCcchHHHHHHH--hcCCCeEecCCCceeCCC
Q 017533          293 KYFRHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWF--IGLEVEHIDDRNMCCQTP  352 (370)
Q Consensus       293 ~Yp~Y~~G~~YvlSrdla~~I~~~~~~l~~~~~EDV~lG~~l--~gL~v~~id~~~fc~~~~  352 (370)
                      .  .++.|++.++.++++..+.--..   ....||..++..+  .|..+...++....+..|
T Consensus       156 ~--~~~~G~~~~~rr~~~~~~g~fd~---~~~~eD~~l~~r~~~~G~~~~~~~~~~v~~~~~  212 (228)
T PF13641_consen  156 V--AFLSGSGMLFRRSALEEVGGFDP---FILGEDFDLCLRLRAAGWRIVYAPDALVYHEEP  212 (228)
T ss_dssp             ---S-B--TEEEEEHHHHHHH-S--S---SSSSHHHHHHHHHHHTT--EEEEEEEEEEE--S
T ss_pred             e--eeccCcEEEEEHHHHHHhCCCCC---CCcccHHHHHHHHHHCCCcEEEECCcEEEEeCC
Confidence            1  34689999999999999853222   4456999999877  466666666544444433

>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI

Probab=95.36  E-value=0.41  Score=48.05  Aligned_cols=164  Identities=18%  Similarity=0.204  Sum_probs=84.5

Q ss_pred             ceEEEEEeecCCCCChhHHHHHHHHHhhCCC--EEEeccccccccchhHHHHHHHHHHhcCCceEEEEecCceeecHHHH
Q 017533          171 GIIIRFMIGHSATSNSILDKAIDSEDAQHKD--FLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGML  248 (370)
Q Consensus       171 ~i~v~FVvG~s~~~~~~~~~~I~~E~~~~~D--IL~ld~~Dsy~nLt~Kt~~~~~wa~~~~~a~F~lKvDDDvfVnl~~L  248 (370)
                      .+.++++...+.  +++ ...+++=.++|.+  +..+...+ -.....|.-...+ +.+..+.++++.+|+|+.+..+.|
T Consensus        70 ~~EIivvdd~s~--D~t-~~iv~~~~~~~p~~~i~~v~~~~-~~G~~~K~~~l~~-~~~~a~ge~i~~~DaD~~~~p~~L  144 (373)
T TIGR03472        70 GFQMLFGVQDPD--DPA-LAVVRRLRADFPDADIDLVIDAR-RHGPNRKVSNLIN-MLPHARHDILVIADSDISVGPDYL  144 (373)
T ss_pred             CeEEEEEeCCCC--CcH-HHHHHHHHHhCCCCceEEEECCC-CCCCChHHHHHHH-HHHhccCCEEEEECCCCCcChhHH
Confidence            366777666543  222 2223322345555  32221111 1222346655443 455678999999999999999999


Q ss_pred             HHHHhhcCCCCce-EEEEe-ecCcc--cccC-----CCccccCCccccCCCCCccCccccCCeeeecHHHHHHHHHhCCC
Q 017533          249 ATTLSRHRSKPRV-YIGCM-KSGPV--LSQK-----NVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISINQPI  319 (370)
Q Consensus       249 ~~~L~~~~~~~~l-YiG~~-~~~pv--~rd~-----~~K~~~pe~w~f~y~~~~Yp~Y~~G~~YvlSrdla~~I~~~~~~  319 (370)
                      ...+.... .+++ .+++. ...+.  ....     ..-++.|.. ..... ..-+.++.|+.+++.|++...+---.. 
T Consensus       145 ~~lv~~~~-~~~v~~V~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~-~~~~~~~~G~~~a~RR~~l~~iGGf~~-  220 (373)
T TIGR03472       145 RQVVAPLA-DPDVGLVTCLYRGRPVPGFWSRLGAMGINHNFLPSV-MVARA-LGRARFCFGATMALRRATLEAIGGLAA-  220 (373)
T ss_pred             HHHHHHhc-CCCcceEeccccCCCCCCHHHHHHHHHhhhhhhHHH-HHHHh-ccCCccccChhhheeHHHHHHcCChHH-
Confidence            88887764 2332 22221 11110  0000     000111100 00000 011345889999999999988853221 


Q ss_pred             cCCCCcchHHHHHHHh--cCCCeEec
Q 017533          320 LHKFANEDVSLGSWFI--GLEVEHID  343 (370)
Q Consensus       320 l~~~~~EDV~lG~~l~--gL~v~~id  343 (370)
                      ......||+.+|.-+.  |..+...+
T Consensus       221 ~~~~~~ED~~l~~~i~~~G~~v~~~~  246 (373)
T TIGR03472       221 LAHHLADDYWLGELVRALGLRVVLAP  246 (373)
T ss_pred             hcccchHHHHHHHHHHHcCCeEEecc
Confidence            1223369999998885  44454443

This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano

>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan

Probab=94.95  E-value=1.8  Score=39.34  Aligned_cols=168  Identities=11%  Similarity=0.035  Sum_probs=85.8

Q ss_pred             CceEEEEEeecCCCCChhHHHHHHHHHhhCCCEEEeccccccccchhHHHHHHHHHHhcCCceEEEEecCceeecHHHHH
Q 017533          170 KGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLA  249 (370)
Q Consensus       170 ~~i~v~FVvG~s~~~~~~~~~~I~~E~~~~~DIL~ld~~Dsy~nLt~Kt~~~~~wa~~~~~a~F~lKvDDDvfVnl~~L~  249 (370)
                      ..+.++.|.+.+.   +.....++...+++..+..+.. +   +.. +. ..+..+.+....+|++.+|+|..+..+.|.
T Consensus        30 ~~~evivvd~~s~---d~~~~~~~~~~~~~~~v~~i~~-~---~~~-~~-~a~N~g~~~a~~d~v~~lD~D~~~~~~~l~  100 (249)
T cd02525          30 DLIEIIVVDGGST---DGTREIVQEYAAKDPRIRLIDN-P---KRI-QS-AGLNIGIRNSRGDIIIRVDAHAVYPKDYIL  100 (249)
T ss_pred             CccEEEEEeCCCC---ccHHHHHHHHHhcCCeEEEEeC-C---CCC-ch-HHHHHHHHHhCCCEEEEECCCccCCHHHHH
Confidence            3456666655553   2233344444444333433322 1   111 11 356666666689999999999999988888


Q ss_pred             HHHhhcCCCC-ceEEEEeec---Ccccc---c-CCCccccCCccccCCCCCccCccccCCeeeecHHHHHHHHHhCCCcC
Q 017533          250 TTLSRHRSKP-RVYIGCMKS---GPVLS---Q-KNVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISINQPILH  321 (370)
Q Consensus       250 ~~L~~~~~~~-~lYiG~~~~---~pv~r---d-~~~K~~~pe~w~f~y~~~~Yp~Y~~G~~YvlSrdla~~I~~~~~~l~  321 (370)
                      ..+......+ .+..|....   .+...   . ....+..... .+......+-.++.|++.++++++.+.+......  
T Consensus       101 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--  177 (249)
T cd02525         101 ELVEALKRTGADNVGGPMETIGESKFQKAIAVAQSSPLGSGGS-AYRGGAVKIGYVDTVHHGAYRREVFEKVGGFDES--  177 (249)
T ss_pred             HHHHHHhcCCCCEEecceecCCCChHHHHHHHHhhchhccCCc-cccccccccccccccccceEEHHHHHHhCCCCcc--
Confidence            8886554333 344444321   11100   0 0000000000 0000000101145788889999998887432222  


Q ss_pred             CCCcchHHHHHHH--hcCCCeEecCCCcee
Q 017533          322 KFANEDVSLGSWF--IGLEVEHIDDRNMCC  349 (370)
Q Consensus       322 ~~~~EDV~lG~~l--~gL~v~~id~~~fc~  349 (370)
                      ....||..++.-+  .|..+.++++...++
T Consensus       178 ~~~~eD~~l~~r~~~~G~~~~~~~~~~~~~  207 (249)
T cd02525         178 LVRNEDAELNYRLRKAGYKIWLSPDIRVYY  207 (249)
T ss_pred             cCccchhHHHHHHHHcCcEEEEcCCeEEEE
Confidence            2347999998666  455566665544444

Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.

>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans

Probab=94.86  E-value=1.8  Score=41.55  Aligned_cols=129  Identities=14%  Similarity=0.189  Sum_probs=73.6

Q ss_pred             HHHHHHhcCCceEEEEecCceeecHHHHHHHHhhcCCCCceEEE-Eee--cCcccccCC--------CccccCCcccc--
Q 017533          221 FFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRHRSKPRVYIG-CMK--SGPVLSQKN--------VKYHEPEYWKF--  287 (370)
Q Consensus       221 ~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~~L~~~~~~~~lYiG-~~~--~~pv~rd~~--------~K~~~pe~w~f--  287 (370)
                      +...+.+....+|++..|+|+.+..+-|..++......+...+| .+.  .+.-....+        -.|.....|.-  
T Consensus        74 a~N~g~~~A~gd~i~fLD~D~~~~~~wL~~ll~~l~~~~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (299)
T cd02510          74 ARIAGARAATGDVLVFLDSHCEVNVGWLEPLLARIAENRKTVVCPIIDVIDADTFEYRGSSGDARGGFDWSLHFKWLPLP  153 (299)
T ss_pred             HHHHHHHHccCCEEEEEeCCcccCccHHHHHHHHHHhCCCeEEEeeeccccCCCeeEecCCCceeEEecccceeccccCC
Confidence            34455555678999999999999988888877765444433332 221  010000000        00100000000  


Q ss_pred             ------C-CCCCccCccccCCeeeecHHHHHHHHHhCCCcCCCCcchHHHH--HHHhcCCCeEecCCCcee
Q 017533          288 ------G-EEGNKYFRHATGQIYAISKDLATYISINQPILHKFANEDVSLG--SWFIGLEVEHIDDRNMCC  349 (370)
Q Consensus       288 ------~-y~~~~Yp~Y~~G~~YvlSrdla~~I~~~~~~l~~~~~EDV~lG--~~l~gL~v~~id~~~fc~  349 (370)
                            . .+.....++++|+++++++++...+.--.+.+..+..||+-+.  .|..|..+..+.+....|
T Consensus       154 ~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~vGgfDe~~~~~~~ED~Dl~~R~~~~G~~i~~~p~a~v~H  224 (299)
T cd02510         154 EEERRRESPTAPIRSPTMAGGLFAIDREWFLELGGYDEGMDIWGGENLELSFKVWQCGGSIEIVPCSRVGH  224 (299)
T ss_pred             HHHhhhcCCCCCccCccccceeeEEEHHHHHHhCCCCCcccccCchhHHHHHHHHHcCCeEEEeeccEEEE
Confidence                  0 0012334567899999999999988654444445557998876  455777777666655554

UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.

>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=94.84  E-value=0.97  Score=40.50  Aligned_cols=169  Identities=15%  Similarity=0.046  Sum_probs=87.1

Q ss_pred             eEEEEEeecCCCCChhHHHHHH-HHHhhCCCEEEeccccccccchhHHHHHHHHHHhcCCceEEEEecCceeecHHHHHH
Q 017533          172 IIIRFMIGHSATSNSILDKAID-SEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLAT  250 (370)
Q Consensus       172 i~v~FVvG~s~~~~~~~~~~I~-~E~~~~~DIL~ld~~Dsy~nLt~Kt~~~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~  250 (370)
                      +.++.|-..|.  ++ ....+. .....+..+..++..+ ..+ ..|. ..+.++.+....+|++.+|+|..+..+.|..
T Consensus        29 ~eiivvdd~s~--d~-t~~~~~~~~~~~~~~v~~~~~~~-~~~-~g~~-~a~n~g~~~~~~d~i~~~D~D~~~~~~~l~~  102 (229)
T cd04192          29 FEVILVDDHST--DG-TVQILEFAAAKPNFQLKILNNSR-VSI-SGKK-NALTTAIKAAKGDWIVTTDADCVVPSNWLLT  102 (229)
T ss_pred             eEEEEEcCCCC--cC-hHHHHHHHHhCCCcceEEeeccC-ccc-chhH-HHHHHHHHHhcCCEEEEECCCcccCHHHHHH
Confidence            56666665543  22 223343 2222233455555443 222 2233 3456666667899999999999999988888


Q ss_pred             HHhhcCCC-CceEEEEeecCcc---ccc-CCCccccCCccccCCCCCccCccccCCeeeecHHHHHHHHHhCCCcCCCCc
Q 017533          251 TLSRHRSK-PRVYIGCMKSGPV---LSQ-KNVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISINQPILHKFAN  325 (370)
Q Consensus       251 ~L~~~~~~-~~lYiG~~~~~pv---~rd-~~~K~~~pe~w~f~y~~~~Yp~Y~~G~~YvlSrdla~~I~~~~~~l~~~~~  325 (370)
                      .+..+... ..++.|.....+.   ... ..-.+.....-........++..+.|+++++++++...+---... .....
T Consensus       103 l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~~ggf~~~-~~~~~  181 (229)
T cd04192         103 FVAFIQKEQIGLVAGPVIYFKGKSLLAKFQRLDWLSLLGLIAGSFGLGKPFMCNGANMAYRKEAFFEVGGFEGN-DHIAS  181 (229)
T ss_pred             HHHHhhcCCCcEEeeeeeecCCccHHHHHHHHHHHHHHHHHhhHHHhcCccccccceEEEEHHHHHHhcCCccc-ccccc
Confidence            88755433 3445554321111   000 000000000000000122355567899999999999987543222 23345


Q ss_pred             chHHHHH--HHhcC-CCeEecCCCc
Q 017533          326 EDVSLGS--WFIGL-EVEHIDDRNM  347 (370)
Q Consensus       326 EDV~lG~--~l~gL-~v~~id~~~f  347 (370)
                      ||..++.  ...|. .+..+.+...
T Consensus       182 eD~~~~~~~~~~g~~~~~~~~~~~~  206 (229)
T cd04192         182 GDDELLLAKVASKYPKVAYLKNPEA  206 (229)
T ss_pred             CCHHHHHHHHHhCCCCEEEeeCcch
Confidence            6666654  33566 6666654433

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>PF01755 Glyco_transf_25: Glycosyltransferase family 25 (LPS biosynthesis protein); InterPro: IPR002654 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=94.40  E-value=1.1  Score=40.54  Aligned_cols=93  Identities=16%  Similarity=0.128  Sum_probs=50.6

Q ss_pred             EEEECCCCCHHHHHHHHHHhccCchhhHhhhccCceEEEEEeecCCCCChhHHHHHHHHHhhCCCEEEec-----ccccc
Q 017533          137 IGINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLE-----HIEGY  211 (370)
Q Consensus       137 I~V~S~~~~~~rR~aIR~TW~~~~~~l~~l~~~~~i~v~FVvG~s~~~~~~~~~~I~~E~~~~~DIL~ld-----~~Dsy  211 (370)
                      |-|.|-+.+.+||+.+.+.....           ++.+.|+-|-.+..   ++.  .+....++.-....     ..-+.
T Consensus         4 i~vInL~~~~~Rr~~~~~~~~~~-----------~~~~e~~~Avdg~~---l~~--~~~~~~~~~~~~~~~~~~~lt~gE   67 (200)
T PF01755_consen    4 IYVINLDRSTERRERIQQQLAKL-----------GINFEFFDAVDGRD---LSE--DELFRRYDPELFKKRYGRPLTPGE   67 (200)
T ss_pred             EEEEECCCCHHHHHHHHHHHHHc-----------CCceEEEEeecccc---cch--HHHHHHhhhhhhhccccccCCcce
Confidence            34567788899999998876643           34566776665421   111  11111121111110     11111


Q ss_pred             ccchhHHHHHHHHHHhcCCceEEEEecCceeecHH
Q 017533          212 HELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLG  246 (370)
Q Consensus       212 ~nLt~Kt~~~~~wa~~~~~a~F~lKvDDDvfVnl~  246 (370)
                      -.=.+-.+..++.+++ -+.++.+-..||++++.+
T Consensus        68 iGC~lSH~~~w~~~v~-~~~~~~lIlEDDv~~~~~  101 (200)
T PF01755_consen   68 IGCALSHIKAWQRIVD-SGLEYALILEDDVIFDPD  101 (200)
T ss_pred             EeehhhHHHHHHHHHH-cCCCeEEEEecccccccc
Confidence            1113445556666654 367899999999999965

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 25 GT25 from CAZY comprises enzymes with only one known activity; as a lipopolysaccharide biosynthesis protein. These enzymes catalyse the transfer of various sugars onto the growing lipopolysaccharide chain during its biosynthesis [].; GO: 0009103 lipopolysaccharide biosynthetic process

>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis

Probab=93.87  E-value=1.5  Score=39.25  Aligned_cols=140  Identities=19%  Similarity=0.151  Sum_probs=82.0

Q ss_pred             eEEEEEeecCCCCChhHHHHHHHHHhhCC--CEEEeccccccccchhHHHHHHHHHHhcCCceEEEEecCceeecHHHHH
Q 017533          172 IIIRFMIGHSATSNSILDKAIDSEDAQHK--DFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLA  249 (370)
Q Consensus       172 i~v~FVvG~s~~~~~~~~~~I~~E~~~~~--DIL~ld~~Dsy~nLt~Kt~~~~~wa~~~~~a~F~lKvDDDvfVnl~~L~  249 (370)
                      +.+++|...+.  +++ ...+++-.+.|.  ++..+....+. ....|.. .+..+.+....+|++..|+|+.+..+.|.
T Consensus        31 ~eiivVdd~s~--d~t-~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~-~~n~g~~~a~~d~i~~~D~D~~~~~~~l~  105 (196)
T cd02520          31 YEILFCVQDED--DPA-IPVVRKLIAKYPNVDARLLIGGEKV-GINPKVN-NLIKGYEEARYDILVISDSDISVPPDYLR  105 (196)
T ss_pred             eEEEEEeCCCc--chH-HHHHHHHHHHCCCCcEEEEecCCcC-CCCHhHH-HHHHHHHhCCCCEEEEECCCceEChhHHH
Confidence            67777776654  222 233444444554  33222221111 1223433 24555666779999999999999988888


Q ss_pred             HHHhhcCCCCceEEEEeecCcccccCCCccccCCccccCCCCCccCccccCCeeeecHHHHHHHHHhCCCcCCCCcchHH
Q 017533          250 TTLSRHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISINQPILHKFANEDVS  329 (370)
Q Consensus       250 ~~L~~~~~~~~lYiG~~~~~pv~rd~~~K~~~pe~w~f~y~~~~Yp~Y~~G~~YvlSrdla~~I~~~~~~l~~~~~EDV~  329 (370)
                      ..+.... .+++  |.+.+                           .++.|++.++.+++.+.+.--. ....+..||..
T Consensus       106 ~l~~~~~-~~~~--~~v~~---------------------------~~~~g~~~~~r~~~~~~~ggf~-~~~~~~~eD~~  154 (196)
T cd02520         106 RMVAPLM-DPGV--GLVTC---------------------------LCAFGKSMALRREVLDAIGGFE-AFADYLAEDYF  154 (196)
T ss_pred             HHHHHhh-CCCC--CeEEe---------------------------ecccCceeeeEHHHHHhccChH-HHhHHHHHHHH
Confidence            8877642 2221  22110                           0478999999999998874322 12223479999


Q ss_pred             HHHHHh--cCCCeEecCCCc
Q 017533          330 LGSWFI--GLEVEHIDDRNM  347 (370)
Q Consensus       330 lG~~l~--gL~v~~id~~~f  347 (370)
                      ++.-+.  |..+.+.++...
T Consensus       155 l~~rl~~~G~~i~~~~~~~~  174 (196)
T cd02520         155 LGKLIWRLGYRVVLSPYVVM  174 (196)
T ss_pred             HHHHHHHcCCeEEEcchhee
Confidence            998874  555666665433

UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.

>PRK11204 N-glycosyltransferase; Provisional

Probab=93.85  E-value=3.4  Score=41.76  Aligned_cols=153  Identities=17%  Similarity=0.197  Sum_probs=85.3

Q ss_pred             HHHHHHHHhhCCCEEEeccccccccchhHHHHHHHHHHhcCCceEEEEecCceeecHHHHHHHHhhcCCCCceEEEEeec
Q 017533          189 DKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRHRSKPRVYIGCMKS  268 (370)
Q Consensus       189 ~~~I~~E~~~~~DIL~ld~~Dsy~nLt~Kt~~~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~~L~~~~~~~~lYiG~~~~  268 (370)
                      ...+++..+++..+..++..+   |. .|. ..++.+.+..+.+|++..|+|..+..+.|...+......+++  |.+.+
T Consensus        98 ~~~l~~~~~~~~~v~~i~~~~---n~-Gka-~aln~g~~~a~~d~i~~lDaD~~~~~d~L~~l~~~~~~~~~v--~~v~g  170 (420)
T PRK11204         98 GEILDRLAAQIPRLRVIHLAE---NQ-GKA-NALNTGAAAARSEYLVCIDGDALLDPDAAAYMVEHFLHNPRV--GAVTG  170 (420)
T ss_pred             HHHHHHHHHhCCcEEEEEcCC---CC-CHH-HHHHHHHHHcCCCEEEEECCCCCCChhHHHHHHHHHHhCCCe--EEEEC
Confidence            344455455566565555333   32 243 345666666789999999999999999998888776444433  33322


Q ss_pred             CcccccCCCcccc----CCccc-cCC-----CCCccCccccCCeeeecHHHHHHHHHhCCCcCCCCcchHHHHHHH--hc
Q 017533          269 GPVLSQKNVKYHE----PEYWK-FGE-----EGNKYFRHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWF--IG  336 (370)
Q Consensus       269 ~pv~rd~~~K~~~----pe~w~-f~y-----~~~~Yp~Y~~G~~YvlSrdla~~I~~~~~~l~~~~~EDV~lG~~l--~g  336 (370)
                      .+...+.. .+..    .++.. ++.     .....+...+|.+.++.++++..+.--.   +....||+-++.-+  .|
T Consensus       171 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~vgg~~---~~~~~ED~~l~~rl~~~G  246 (420)
T PRK11204        171 NPRIRNRS-TLLGRIQVGEFSSIIGLIKRAQRVYGRVFTVSGVITAFRKSALHEVGYWS---TDMITEDIDISWKLQLRG  246 (420)
T ss_pred             Cceeccch-hHHHHHHHHHHHHhhhHHHHHHHHhCCceEecceeeeeeHHHHHHhCCCC---CCcccchHHHHHHHHHcC
Confidence            22221111 0100    00000 000     0001122357989999999988763211   22347999998777  56


Q ss_pred             CCCeEecCCCceeCCC
Q 017533          337 LEVEHIDDRNMCCQTP  352 (370)
Q Consensus       337 L~v~~id~~~fc~~~~  352 (370)
                      ..+...++....+..|
T Consensus       247 ~~i~~~p~~~~~~~~p  262 (420)
T PRK11204        247 WDIRYEPRALCWILMP  262 (420)
T ss_pred             CeEEeccccEEEeECc
Confidence            6677777654444333

>TIGR03469 HonB hopene-associated glycosyltransferase HpnB

Probab=93.63  E-value=2.9  Score=42.13  Aligned_cols=169  Identities=14%  Similarity=0.024  Sum_probs=85.2

Q ss_pred             ceEEEEEeecCCCCChhHHHHHHHHHhhCC---CEEEeccccccccchhHHHH---HHHHHHhc-CCceEEEEecCceee
Q 017533          171 GIIIRFMIGHSATSNSILDKAIDSEDAQHK---DFLRLEHIEGYHELSAKTKI---FFSTAVAK-WDADFYVKVDDDVHV  243 (370)
Q Consensus       171 ~i~v~FVvG~s~~~~~~~~~~I~~E~~~~~---DIL~ld~~Dsy~nLt~Kt~~---~~~wa~~~-~~a~F~lKvDDDvfV  243 (370)
                      .+.+++|-..|.+  ++ ...+++-.+++.   .+..+...+.-.+-..|...   +++.|.+. .+.+|++.+|+|+.+
T Consensus        70 ~~eIIVVDd~StD--~T-~~i~~~~~~~~~~~~~i~vi~~~~~~~g~~Gk~~A~n~g~~~A~~~~~~gd~llflDaD~~~  146 (384)
T TIGR03469        70 KLHVILVDDHSTD--GT-ADIARAAARAYGRGDRLTVVSGQPLPPGWSGKLWAVSQGIAAARTLAPPADYLLLTDADIAH  146 (384)
T ss_pred             ceEEEEEeCCCCC--cH-HHHHHHHHHhcCCCCcEEEecCCCCCCCCcchHHHHHHHHHHHhccCCCCCEEEEECCCCCC
Confidence            3567777666542  22 222222222333   34444432222222345333   44444332 248999999999999


Q ss_pred             cHHHHHHHHhhcCCCC-ceEEEEeecCcccccCCCcccc-----------CCccccCCCCCccCccccCCeeeecHHHHH
Q 017533          244 NLGMLATTLSRHRSKP-RVYIGCMKSGPVLSQKNVKYHE-----------PEYWKFGEEGNKYFRHATGQIYAISKDLAT  311 (370)
Q Consensus       244 nl~~L~~~L~~~~~~~-~lYiG~~~~~pv~rd~~~K~~~-----------pe~w~f~y~~~~Yp~Y~~G~~YvlSrdla~  311 (370)
                      ..+.|...+......+ .+..|.......  ....+...           |..|. .. .......+.|++.++++++.+
T Consensus       147 ~p~~l~~lv~~~~~~~~~~vs~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~G~~~lirr~~~~  222 (384)
T TIGR03469       147 GPDNLARLVARARAEGLDLVSLMVRLRCE--SFWEKLLIPAFVFFFQKLYPFRWV-ND-PRRRTAAAAGGCILIRREALE  222 (384)
T ss_pred             ChhHHHHHHHHHHhCCCCEEEecccccCC--CHHHHHHHHHHHHHHHHhcchhhh-cC-CCccceeecceEEEEEHHHHH
Confidence            9998888887654332 332222211000  00000000           10010 01 112234468999999999998


Q ss_pred             HHHHhCCCcCCCCcchHHHHHHHh--cCCCeEecCCCc
Q 017533          312 YISINQPILHKFANEDVSLGSWFI--GLEVEHIDDRNM  347 (370)
Q Consensus       312 ~I~~~~~~l~~~~~EDV~lG~~l~--gL~v~~id~~~f  347 (370)
                      .+---.. ......||+.++.-+.  |..+........
T Consensus       223 ~vGGf~~-~~~~~~ED~~L~~r~~~~G~~v~~~~~~~~  259 (384)
T TIGR03469       223 RIGGIAA-IRGALIDDCTLAAAVKRSGGRIWLGLAART  259 (384)
T ss_pred             HcCCHHH-HhhCcccHHHHHHHHHHcCCcEEEEecCce
Confidence            8833211 1122479999998885  445555444333

This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.

>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily

Probab=93.25  E-value=2.8  Score=38.54  Aligned_cols=125  Identities=18%  Similarity=0.112  Sum_probs=66.6

Q ss_pred             HHHHHHhcCCceEEEEecCceeecHHHHHHHHhhcCC-CCceEEEEeec-CcccccCCCccc--cCCccccCCCCCccCc
Q 017533          221 FFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRHRS-KPRVYIGCMKS-GPVLSQKNVKYH--EPEYWKFGEEGNKYFR  296 (370)
Q Consensus       221 ~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~~L~~~~~-~~~lYiG~~~~-~pv~rd~~~K~~--~pe~w~f~y~~~~Yp~  296 (370)
                      .+..+.+....+|++.+|+|+.+..+.|.+.+..... ...+..|.... .+.........+  ....+.........+.
T Consensus       100 a~n~gi~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (251)
T cd06439         100 ALNRALALATGEIVVFTDANALLDPDALRLLVRHFADPSVGAVSGELVIVDGGGSGSGEGLYWKYENWLKRAESRLGSTV  179 (251)
T ss_pred             HHHHHHHHcCCCEEEEEccccCcCHHHHHHHHHHhcCCCccEEEeEEEecCCcccchhHHHHHHHHHHHHHHHHhcCCee
Confidence            3455555566799999999999998888888877642 22343443321 110000000000  0000000000011233


Q ss_pred             cccCCeeeecHHHHHHHHHhCCCcCCCCcchHHHHHHHh--cCCCeEecCCCceeCC
Q 017533          297 HATGQIYAISKDLATYISINQPILHKFANEDVSLGSWFI--GLEVEHIDDRNMCCQT  351 (370)
Q Consensus       297 Y~~G~~YvlSrdla~~I~~~~~~l~~~~~EDV~lG~~l~--gL~v~~id~~~fc~~~  351 (370)
                      .+.|+++++.+++..      ..-.....||..++.-+.  |..+.++++...+...
T Consensus       180 ~~~g~~~~~rr~~~~------~~~~~~~~eD~~l~~~~~~~G~~~~~~~~~~~~~~~  230 (251)
T cd06439         180 GANGAIYAIRRELFR------PLPADTINDDFVLPLRIARQGYRVVYEPDAVAYEEV  230 (251)
T ss_pred             eecchHHHhHHHHhc------CCCcccchhHHHHHHHHHHcCCeEEeccccEEEEeC
Confidence            467888888888766      122233479999987774  5556666655554443

This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.

>PF13506 Glyco_transf_21: Glycosyl transferase family 21

Probab=93.09  E-value=0.18  Score=45.60  Aligned_cols=128  Identities=15%  Similarity=0.087  Sum_probs=74.2

Q ss_pred             hhHHHHHHHHHHhcCCceEEEEecCceeecHHHHHHHHhhcCCCCceEEEEee-cCcccccCCCccccCCcccc---CCC
Q 017533          215 SAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRHRSKPRVYIGCMK-SGPVLSQKNVKYHEPEYWKF---GEE  290 (370)
Q Consensus       215 t~Kt~~~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~~L~~~~~~~~lYiG~~~-~~pv~rd~~~K~~~pe~w~f---~y~  290 (370)
                      ..|+-............++++..|+|+.|+.+.|...+..+...+--.+.++. ..|. +. .....+.....|   .+.
T Consensus        16 N~Kv~nL~~~~~~~a~~d~~~~~DsDi~v~p~~L~~lv~~l~~p~vglVt~~~~~~~~-~~-~~~~l~~~~~~~~~~~~~   93 (175)
T PF13506_consen   16 NPKVNNLAQGLEAGAKYDYLVISDSDIRVPPDYLRELVAPLADPGVGLVTGLPRGVPA-RG-FWSRLEAAFFNFLPGVLQ   93 (175)
T ss_pred             ChHHHHHHHHHHhhCCCCEEEEECCCeeECHHHHHHHHHHHhCCCCcEEEecccccCC-cC-HHHHHHHHHHhHHHHHHH
Confidence            35666655543323789999999999999999999988877542211112211 1111 00 000001000000   000


Q ss_pred             CCccCccccCCeeeecHHHHHHHHHhCCCcCCCCcchHHHHHHHhcCCCeEecCC
Q 017533          291 GNKYFRHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWFIGLEVEHIDDR  345 (370)
Q Consensus       291 ~~~Yp~Y~~G~~YvlSrdla~~I~~~~~~l~~~~~EDV~lG~~l~gL~v~~id~~  345 (370)
                      .-...+++.|+.+++.+++++.+-- ...+..+--||..+|..+...+.+.+-..
T Consensus        94 a~~~~~~~~G~~m~~rr~~L~~~GG-~~~l~~~ladD~~l~~~~~~~G~~v~~~~  147 (175)
T PF13506_consen   94 ALGGAPFAWGGSMAFRREALEEIGG-FEALADYLADDYALGRRLRARGYRVVLSP  147 (175)
T ss_pred             HhcCCCceecceeeeEHHHHHHccc-HHHHhhhhhHHHHHHHHHHHCCCeEEEcc
Confidence            0124567999999999999987731 22233467999999999976665555443

>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=92.61  E-value=2.3  Score=35.39  Aligned_cols=135  Identities=11%  Similarity=0.090  Sum_probs=66.0

Q ss_pred             ceEEEEEeecCCCCChhHHHHHHHHHhhCCCEEEeccccccccchhHHHHHHHHHHhcCCceEEEEecCceeecHHHHHH
Q 017533          171 GIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLAT  250 (370)
Q Consensus       171 ~i~v~FVvG~s~~~~~~~~~~I~~E~~~~~DIL~ld~~Dsy~nLt~Kt~~~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~  250 (370)
                      .+.+++|-..+.   +.....+.+-.+....+..+...++. .    .-..+..+.+....+|++.+|||.++..+.|..
T Consensus        27 ~~eiivvdd~s~---d~~~~~~~~~~~~~~~i~~i~~~~n~-g----~~~~~n~~~~~a~~~~i~~ld~D~~~~~~~l~~   98 (169)
T PF00535_consen   27 DFEIIVVDDGST---DETEEILEEYAESDPNIRYIRNPENL-G----FSAARNRGIKHAKGEYILFLDDDDIISPDWLEE   98 (169)
T ss_dssp             EEEEEEEECS-S---SSHHHHHHHHHCCSTTEEEEEHCCCS-H----HHHHHHHHHHH--SSEEEEEETTEEE-TTHHHH
T ss_pred             CEEEEEeccccc---cccccccccccccccccccccccccc-c----ccccccccccccceeEEEEeCCCceEcHHHHHH
Confidence            345555554442   23333333333324455555554433 2    223344444455677999999999999887777


Q ss_pred             HHhhcCC-CCceEEEEee--cCccc-ccCCC---ccccCCccccCCCCCccCccccCCeeeecHHHHHHH
Q 017533          251 TLSRHRS-KPRVYIGCMK--SGPVL-SQKNV---KYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYI  313 (370)
Q Consensus       251 ~L~~~~~-~~~lYiG~~~--~~pv~-rd~~~---K~~~pe~w~f~y~~~~Yp~Y~~G~~YvlSrdla~~I  313 (370)
                      ++..... ...+.+|...  ..... .....   .+..............-..++.|++.++++++.+.+
T Consensus        99 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~  168 (169)
T PF00535_consen   99 LVEALEKNPPDVVIGSVIYIDDDNRYPDRRLRFSFWNRFERKIFNNIRFWKISFFIGSCALFRRSVFEEI  168 (169)
T ss_dssp             HHHHHHHCTTEEEEEEEEEEECTTETEECCCTSEEEECCHCHHHHTTHSTTSSEESSSCEEEEEHHHHHC
T ss_pred             HHHHHHhCCCcEEEEEEEEecCCccccccccchhhhhhhhhHHHHhhhcCCcccccccEEEEEHHHHHhh
Confidence            7766544 3445566542  11110 01100   011111001011122334457889999999988764

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....

>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose

Probab=92.60  E-value=0.97  Score=40.83  Aligned_cols=124  Identities=14%  Similarity=0.047  Sum_probs=72.7

Q ss_pred             HHHHHhcCCceEEEEecCceeecHHHHHHHHhhcCCCCceEE--EEee--c-Ccc---cccC--CCccccC-CccccCCC
Q 017533          222 FSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRHRSKPRVYI--GCMK--S-GPV---LSQK--NVKYHEP-EYWKFGEE  290 (370)
Q Consensus       222 ~~wa~~~~~a~F~lKvDDDvfVnl~~L~~~L~~~~~~~~lYi--G~~~--~-~pv---~rd~--~~K~~~p-e~w~f~y~  290 (370)
                      +..+.+..+.+|++.+|+|.++..+.|..++......+++.+  |...  . ...   .+..  ....+.. ..+..   
T Consensus        76 ~n~~~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  152 (234)
T cd06421          76 LNNALAHTTGDFVAILDADHVPTPDFLRRTLGYFLDDPKVALVQTPQFFYNPDPFDWLADGAPNEQELFYGVIQPGR---  152 (234)
T ss_pred             HHHHHHhCCCCEEEEEccccCcCccHHHHHHHHHhcCCCeEEEecceEEecCCcchhHHHHHHHHHHHHHHHHHHHH---
Confidence            455555568999999999999999988888887654344321  2111  1 110   0000  0000000 00000   


Q ss_pred             CCccCccccCCeeeecHHHHHHHHHhCCCcCCCCcchHHHHHHH--hcCCCeEecCCCceeCC
Q 017533          291 GNKYFRHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWF--IGLEVEHIDDRNMCCQT  351 (370)
Q Consensus       291 ~~~Yp~Y~~G~~YvlSrdla~~I~~~~~~l~~~~~EDV~lG~~l--~gL~v~~id~~~fc~~~  351 (370)
                      ......++.|++.++++++++.+.--.   ..+..||..++.-+  .|..+..+++.......
T Consensus       153 ~~~~~~~~~g~~~~~r~~~~~~ig~~~---~~~~~eD~~l~~r~~~~g~~i~~~~~~~~~~~~  212 (234)
T cd06421         153 DRWGAAFCCGSGAVVRREALDEIGGFP---TDSVTEDLATSLRLHAKGWRSVYVPEPLAAGLA  212 (234)
T ss_pred             hhcCCceecCceeeEeHHHHHHhCCCC---ccceeccHHHHHHHHHcCceEEEecCccccccC
Confidence            011244578999999999998874321   23457999999777  46667777776554443

Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.

>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=92.38  E-value=6.2  Score=34.94  Aligned_cols=103  Identities=16%  Similarity=0.111  Sum_probs=63.6

Q ss_pred             HHHHHHHHhcCCceEEEEecCceeecHHHHHHHHhhcC-CCCceEEEEeecCcccccCCCccccCCccccCCCCCccCcc
Q 017533          219 KIFFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRHR-SKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKYFRH  297 (370)
Q Consensus       219 ~~~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~~L~~~~-~~~~lYiG~~~~~pv~rd~~~K~~~pe~w~f~y~~~~Yp~Y  297 (370)
                      -..+++|. ..+.+|++..|||..+..+.|...+.... +.-.++.|...      ..              .+      
T Consensus        69 n~~~~~a~-~~~~d~v~~ld~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~------~~--------------~~------  121 (202)
T cd04185          69 YEGVRRAY-ELGYDWIWLMDDDAIPDPDALEKLLAYADKDNPQFLAPLVL------DP--------------DG------  121 (202)
T ss_pred             HHHHHHHh-ccCCCEEEEeCCCCCcChHHHHHHHHHHhcCCceEecceeE------cC--------------CC------
Confidence            44566665 56789999999999999887777776654 22222222110      00              01      


Q ss_pred             ccCCeeeecHHHHHHHHHhCCCcCCCCcchHHHHHHH--hcCCCeEecCCCceeCC
Q 017533          298 ATGQIYAISKDLATYISINQPILHKFANEDVSLGSWF--IGLEVEHIDDRNMCCQT  351 (370)
Q Consensus       298 ~~G~~YvlSrdla~~I~~~~~~l~~~~~EDV~lG~~l--~gL~v~~id~~~fc~~~  351 (370)
                       .+++.++.+++++.+.-..... ....||+.++.-+  .|..+ ...+..+.+..
T Consensus       122 -~~~~~~~~~~~~~~~g~~~~~~-~~~~eD~~~~~r~~~~G~~i-~~~~~~~~h~~  174 (202)
T cd04185         122 -SFVGVLISRRVVEKIGLPDKEF-FIWGDDTEYTLRASKAGPGI-YVPDAVVVHKT  174 (202)
T ss_pred             -ceEEEEEeHHHHHHhCCCChhh-hccchHHHHHHHHHHcCCcE-EecceEEEEcc
Confidence             3456789999988774322222 2357999998766  46666 66666666544

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2

Probab=92.31  E-value=0.6  Score=41.47  Aligned_cols=117  Identities=14%  Similarity=0.138  Sum_probs=70.1

Q ss_pred             EEEEecCceeecHHHHHHHHhhcCCCCceEEEE--eecCcccccCCCccccCCc-ccc-----CCCCCccCccccCCeee
Q 017533          233 FYVKVDDDVHVNLGMLATTLSRHRSKPRVYIGC--MKSGPVLSQKNVKYHEPEY-WKF-----GEEGNKYFRHATGQIYA  304 (370)
Q Consensus       233 F~lKvDDDvfVnl~~L~~~L~~~~~~~~lYiG~--~~~~pv~rd~~~K~~~pe~-w~f-----~y~~~~Yp~Y~~G~~Yv  304 (370)
                      ||+-+|+|+.+..+.|...+.... .|++-+++  +...+. ...-.++..-++ +..     .......+.++.|++.+
T Consensus         1 ~v~~~DaDt~~~~d~l~~~~~~~~-~~~~~~vq~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~   78 (193)
T PF13632_consen    1 YVLFLDADTRLPPDFLERLVAALE-DPKVDAVQGPIIFRNR-GSLLTRLQDFEYAISHGLSRLSQSSLGRPLFLSGSGML   78 (193)
T ss_pred             CEEEEcCCCCCChHHHHHHHHHHh-CCCceEEEccEEecCC-CChhheeehhhhhhhhhhhHHHHHhcCCCccccCccee
Confidence            688999999999999988887766 34333222  211000 000011111110 000     00012346678999999


Q ss_pred             ecHHHHHHHHHhCCCcCCCCcchHHHHHHH--hcCCCeEecCCCceeCCCC
Q 017533          305 ISKDLATYISINQPILHKFANEDVSLGSWF--IGLEVEHIDDRNMCCQTPP  353 (370)
Q Consensus       305 lSrdla~~I~~~~~~l~~~~~EDV~lG~~l--~gL~v~~id~~~fc~~~~~  353 (370)
                      +++++++.+.--.  -.....||..+|.-+  .|..+..+++..+.+..|+
T Consensus        79 ~r~~~l~~vg~~~--~~~~~~ED~~l~~~l~~~G~~~~~~~~~~~~~~~p~  127 (193)
T PF13632_consen   79 FRREALREVGGFD--DPFSIGEDMDLGFRLRRAGYRIVYVPDAIVYTEAPP  127 (193)
T ss_pred             eeHHHHHHhCccc--ccccccchHHHHHHHHHCCCEEEEecccceeeeCCC
Confidence            9999999874211  234457999998765  5777888888766666654

>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=91.67  E-value=6.1  Score=33.05  Aligned_cols=93  Identities=17%  Similarity=0.222  Sum_probs=60.7

Q ss_pred             HHHhcCCceEEEEecCceeecHHHHHHHHhhcCCCCce-EEEEeecCcccccCCCccccCCccccCCCCCccCccccCCe
Q 017533          224 TAVAKWDADFYVKVDDDVHVNLGMLATTLSRHRSKPRV-YIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKYFRHATGQI  302 (370)
Q Consensus       224 wa~~~~~a~F~lKvDDDvfVnl~~L~~~L~~~~~~~~l-YiG~~~~~pv~rd~~~K~~~pe~w~f~y~~~~Yp~Y~~G~~  302 (370)
                      -+.+..+.+|++..|||..+..+.|..++......+.+ .++..                               +.|++
T Consensus        68 ~~~~~~~~~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~~~~~-------------------------------~~~~~  116 (166)
T cd04186          68 QGIREAKGDYVLLLNPDTVVEPGALLELLDAAEQDPDVGIVGPK-------------------------------VSGAF  116 (166)
T ss_pred             HHHhhCCCCEEEEECCCcEECccHHHHHHHHHHhCCCceEEEcc-------------------------------Cceee
Confidence            33344589999999999999998888888754433322 11210                               67889


Q ss_pred             eeecHHHHHHHHHhCCCcCCCCcchHHHHHHH--hcCCCeEecCCCce
Q 017533          303 YAISKDLATYISINQPILHKFANEDVSLGSWF--IGLEVEHIDDRNMC  348 (370)
Q Consensus       303 YvlSrdla~~I~~~~~~l~~~~~EDV~lG~~l--~gL~v~~id~~~fc  348 (370)
                      .++++++++.+..-...... ..||..+..-+  .|..+...++..+.
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~-~~eD~~~~~~~~~~g~~i~~~~~~~~~  163 (166)
T cd04186         117 LLVRREVFEEVGGFDEDFFL-YYEDVDLCLRARLAGYRVLYVPQAVIY  163 (166)
T ss_pred             EeeeHHHHHHcCCCChhhhc-cccHHHHHHHHHHcCCeEEEccceEEE
Confidence            99999988876432222212 56888887655  56666666654443

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>PRK14583 hmsR N-glycosyltransferase; Provisional

Probab=90.79  E-value=17  Score=37.34  Aligned_cols=162  Identities=14%  Similarity=0.174  Sum_probs=87.1

Q ss_pred             ceEEEEEeecCCCCChhHHHHHHHHHhhCCCEEEeccccccccchhHHHHHHHHHHhcCCceEEEEecCceeecHHHHHH
Q 017533          171 GIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLAT  250 (370)
Q Consensus       171 ~i~v~FVvG~s~~~~~~~~~~I~~E~~~~~DIL~ld~~Dsy~nLt~Kt~~~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~  250 (370)
                      ++.+++|...+.   +...+.+++..+++..+..+...+   |. .|. ..++.+....+.+|++..|.|..+..+.|..
T Consensus       104 ~~eIivVdDgs~---D~t~~~~~~~~~~~~~v~vv~~~~---n~-Gka-~AlN~gl~~a~~d~iv~lDAD~~~~~d~L~~  175 (444)
T PRK14583        104 NIEVIAINDGSS---DDTAQVLDALLAEDPRLRVIHLAH---NQ-GKA-IALRMGAAAARSEYLVCIDGDALLDKNAVPY  175 (444)
T ss_pred             CeEEEEEECCCC---ccHHHHHHHHHHhCCCEEEEEeCC---CC-CHH-HHHHHHHHhCCCCEEEEECCCCCcCHHHHHH
Confidence            456555544432   233344555555665554443222   22 243 4566666667899999999999999999988


Q ss_pred             HHhhcCCCCceEEEEeecCcccccCCC---ccccCCccc-cCC--C-CCcc--CccccCCeeeecHHHHHHHHHhCCCcC
Q 017533          251 TLSRHRSKPRVYIGCMKSGPVLSQKNV---KYHEPEYWK-FGE--E-GNKY--FRHATGQIYAISKDLATYISINQPILH  321 (370)
Q Consensus       251 ~L~~~~~~~~lYiG~~~~~pv~rd~~~---K~~~pe~w~-f~y--~-~~~Y--p~Y~~G~~YvlSrdla~~I~~~~~~l~  321 (370)
                      .+......+++  |.+.+.|..++...   +....++.. ++.  + ...|  +..++|...++.+++++.+---.   +
T Consensus       176 lv~~~~~~~~~--g~v~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~g~~~~~sG~~~~~rr~al~~vGg~~---~  250 (444)
T PRK14583        176 LVAPLIANPRT--GAVTGNPRIRTRSTLIGRVQVGEFSSIIGLIKRTQRVYGQVFTVSGVVAAFRRRALADVGYWS---P  250 (444)
T ss_pred             HHHHHHhCCCe--EEEEccceecCCCcchhhHHHHHHHHHHHHHHHHHHHhCCceEecCceeEEEHHHHHHcCCCC---C
Confidence            88766433433  44333222222111   111001000 000  0 0001  11257888999999988764211   2


Q ss_pred             CCCcchHHHHHHH--hcCCCeEecCC
Q 017533          322 KFANEDVSLGSWF--IGLEVEHIDDR  345 (370)
Q Consensus       322 ~~~~EDV~lG~~l--~gL~v~~id~~  345 (370)
                      ....||.-+|.-+  .|..+.+.++.
T Consensus       251 ~~i~ED~dl~~rl~~~G~~i~~~p~a  276 (444)
T PRK14583        251 DMITEDIDISWKLQLKHWSVFFEPRG  276 (444)
T ss_pred             CcccccHHHHHHHHHcCCeEEEeecc
Confidence            2346999999877  45556666544

>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=88.77  E-value=18  Score=36.32  Aligned_cols=173  Identities=13%  Similarity=0.116  Sum_probs=99.4

Q ss_pred             eEEEEEeecCCCCChhHHHHHHHHHhhCCCEEEeccccccccchhHHHHHHHHHHhcCCceEEEEecCceeecHHHHHHH
Q 017533          172 IIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLATT  251 (370)
Q Consensus       172 i~v~FVvG~s~~~~~~~~~~I~~E~~~~~DIL~ld~~Dsy~nLt~Kt~~~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~~  251 (370)
                      ..+..|...+.   +..-+.+.+-..++++.+.+...   .+-...-...+.++...-+.++++..|-|+.+..+.|...
T Consensus        85 ~evivv~d~~~---d~~~~~~~~~~~~~~~~~~~~~~---~~~~~gK~~al~~~l~~~~~d~V~~~DaD~~~~~d~l~~~  158 (439)
T COG1215          85 YEVIVVDDGST---DETYEILEELGAEYGPNFRVIYP---EKKNGGKAGALNNGLKRAKGDVVVILDADTVPEPDALREL  158 (439)
T ss_pred             ceEEEECCCCC---hhHHHHHHHHHhhcCcceEEEec---cccCccchHHHHHHHhhcCCCEEEEEcCCCCCChhHHHHH
Confidence            45666655332   34444555556666544444422   1112223456677777777999999999999999999999


Q ss_pred             HhhcCCCCce-EEEEee--cCc-----ccccCCCccccCC--ccccCCCCCccCccccCCeeeecHHHHHHHHHhCCCcC
Q 017533          252 LSRHRSKPRV-YIGCMK--SGP-----VLSQKNVKYHEPE--YWKFGEEGNKYFRHATGQIYAISKDLATYISINQPILH  321 (370)
Q Consensus       252 L~~~~~~~~l-YiG~~~--~~p-----v~rd~~~K~~~pe--~w~f~y~~~~Yp~Y~~G~~YvlSrdla~~I~~~~~~l~  321 (370)
                      +......+.. +.|...  .++     ..+-....+....  .+.... ....+..+.|...++.+++++.+.   ....
T Consensus       159 ~~~f~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~G~~~~~rr~aL~~~g---~~~~  234 (439)
T COG1215         159 VSPFEDPPVGAVVGTPRIRNRPDPSNLLGRIQAIEYLSAFYFRLRAAS-KGGLISFLSGSSSAFRRSALEEVG---GWLE  234 (439)
T ss_pred             HhhhcCCCeeEEeCCceeeecCChhhhcchhcchhhhhhHHHhhhhhh-hcCCeEEEcceeeeEEHHHHHHhC---CCCC
Confidence            9988655444 333221  111     0000000000000  000011 123577799999999999998887   2333


Q ss_pred             CCCcchHHHHHHHh--cCCCeEecCCCceeCCCCCc
Q 017533          322 KFANEDVSLGSWFI--GLEVEHIDDRNMCCQTPPGN  355 (370)
Q Consensus       322 ~~~~EDV~lG~~l~--gL~v~~id~~~fc~~~~~dc  355 (370)
                      ..--||..+|..+.  |..+.++++. .+....|++
T Consensus       235 ~~i~ED~~lt~~l~~~G~~~~~~~~~-~~~~~~p~t  269 (439)
T COG1215         235 DTITEDADLTLRLHLRGYRVVYVPEA-IVWTEAPET  269 (439)
T ss_pred             CceeccHHHHHHHHHCCCeEEEeecc-eEeeeCccc
Confidence            44579999998885  5567776654 333334443

>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase

Probab=88.53  E-value=18  Score=32.69  Aligned_cols=150  Identities=15%  Similarity=0.057  Sum_probs=74.9

Q ss_pred             CCCEEEeccccccccchhHHHHHHHHHHhcCCceEEEEecCceeecHHHHHHHH---hhcCCCCceE-EEEeecCccccc
Q 017533          199 HKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLATTL---SRHRSKPRVY-IGCMKSGPVLSQ  274 (370)
Q Consensus       199 ~~DIL~ld~~Dsy~nLt~Kt~~~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~~L---~~~~~~~~lY-iG~~~~~pv~rd  274 (370)
                      ...+..+...++.. ...=.-.+++.|.. .+++|++..|+|+.+.++.|..++   ......+.+. +|..........
T Consensus        46 ~~~i~~i~~~~n~G-~~~a~N~g~~~a~~-~~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (237)
T cd02526          46 SEKIELIHLGENLG-IAKALNIGIKAALE-NGADYVLLFDQDSVPPPDMVEKLLAYKILSDKNSNIGAVGPRIIDRRTGE  123 (237)
T ss_pred             CCcEEEEECCCcee-hHHhhhHHHHHHHh-CCCCEEEEECCCCCcCHhHHHHHHHHHHhhccCCCeEEEeeeEEcCCCCe
Confidence            34454444433221 23223334555443 268999999999999998888885   3333333332 232110000000


Q ss_pred             CCCccccCCcc----ccCCCCCccCccccCCeeeecHHHHHHHHHhCCCcCCCCcchHHHHHHH--hcCCCeEecCCCce
Q 017533          275 KNVKYHEPEYW----KFGEEGNKYFRHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWF--IGLEVEHIDDRNMC  348 (370)
Q Consensus       275 ~~~K~~~pe~w----~f~y~~~~Yp~Y~~G~~YvlSrdla~~I~~~~~~l~~~~~EDV~lG~~l--~gL~v~~id~~~fc  348 (370)
                      ....+....++    ........-..++.|++.++++++...+.--...+ .+..||+.++.-+  .|..+..+++....
T Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~ggfd~~~-~~~~eD~d~~~r~~~~G~~~~~~~~~~v~  202 (237)
T cd02526         124 NSPGVRKSGYKLRIQKEGEEGLKEVDFLITSGSLISLEALEKVGGFDEDL-FIDYVDTEWCLRARSKGYKIYVVPDAVLK  202 (237)
T ss_pred             eccceeccCccceecccccCCceEeeeeeccceEEcHHHHHHhCCCCHHH-cCccchHHHHHHHHHcCCcEEEEcCeEEE
Confidence            00000000000    00000111123456778899999888874322222 2346899998777  46667677666665


Q ss_pred             eCC
Q 017533          349 CQT  351 (370)
Q Consensus       349 ~~~  351 (370)
                      +..
T Consensus       203 h~~  205 (237)
T cd02526         203 HEL  205 (237)
T ss_pred             ecc
Confidence            543

Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.

>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis

Probab=88.36  E-value=11  Score=33.12  Aligned_cols=117  Identities=13%  Similarity=0.054  Sum_probs=64.8

Q ss_pred             HHHHHHhcCCceEEEEecCceeecHHHHHHHHhhcCCCC--ceEEEEeec--CcccccCCCccccCCc----cccCCCCC
Q 017533          221 FFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRHRSKP--RVYIGCMKS--GPVLSQKNVKYHEPEY----WKFGEEGN  292 (370)
Q Consensus       221 ~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~~L~~~~~~~--~lYiG~~~~--~pv~rd~~~K~~~pe~----w~f~y~~~  292 (370)
                      .+..+....+.+|++..|+|.++..+.|...+......+  .++.|.+..  .... ....+. .|..    ..|.  ..
T Consensus        71 a~N~g~~~a~gd~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~--~~  146 (201)
T cd04195          71 ALNEGLKHCTYDWVARMDTDDISLPDRFEKQLDFIEKNPEIDIVGGGVLEFDSDGN-DIGKRR-LPTSHDDILKFA--RR  146 (201)
T ss_pred             HHHHHHHhcCCCEEEEeCCccccCcHHHHHHHHHHHhCCCeEEEcccEEEECCCCC-eecccc-CCCCHHHHHHHh--cc
Confidence            355566666899999999999999988888887654333  354454321  1100 000000 1100    0110  00


Q ss_pred             ccCccccCCeeeecHHHHHHHHHhCCCcCCCCcchHHHHHHH--hcCCCeEecCCC
Q 017533          293 KYFRHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWF--IGLEVEHIDDRN  346 (370)
Q Consensus       293 ~Yp~Y~~G~~YvlSrdla~~I~~~~~~l~~~~~EDV~lG~~l--~gL~v~~id~~~  346 (370)
                      .-|  ..|+..++.+.++..+..-.   +....||..+...+  .|..+.++++..
T Consensus       147 ~~~--~~~~~~~~rr~~~~~~g~~~---~~~~~eD~~~~~r~~~~g~~~~~~~~~~  197 (201)
T cd04195         147 RSP--FNHPTVMFRKSKVLAVGGYQ---DLPLVEDYALWARMLANGARFANLPEIL  197 (201)
T ss_pred             CCC--CCChHHhhhHHHHHHcCCcC---CCCCchHHHHHHHHHHcCCceecccHHH
Confidence            111  24566778887776553221   12568999998877  466676665543

AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.

>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=88.26  E-value=11  Score=33.18  Aligned_cols=117  Identities=16%  Similarity=0.087  Sum_probs=65.1

Q ss_pred             HHHhcCCceEEEEecCceeecHHHHHHHHhh-cC-CCCceEEEEee----cCcccccCCCccccCCccc--cCCCCCccC
Q 017533          224 TAVAKWDADFYVKVDDDVHVNLGMLATTLSR-HR-SKPRVYIGCMK----SGPVLSQKNVKYHEPEYWK--FGEEGNKYF  295 (370)
Q Consensus       224 wa~~~~~a~F~lKvDDDvfVnl~~L~~~L~~-~~-~~~~lYiG~~~----~~pv~rd~~~K~~~pe~w~--f~y~~~~Yp  295 (370)
                      .+......+|++..|+|..+.++.|..++.. .. +...++.|.+.    .+.....   .+.......  .........
T Consensus        73 ~g~~~~~g~~v~~ld~Dd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~  149 (214)
T cd04196          73 SLLQAADGDYVFFCDQDDIWLPDKLERLLKAFLKDDKPLLVYSDLELVDENGNPIGE---SFFEYQKIKPGTSFNNLLFQ  149 (214)
T ss_pred             HHHHhCCCCEEEEECCCcccChhHHHHHHHHHhcCCCceEEecCcEEECCCCCCccc---ccccccccCCccCHHHHHHh
Confidence            3455578999999999999998888888876 22 33344444321    1111110   000000000  000001223


Q ss_pred             ccccCCeeeecHHHHHHHHHhCCCcCCCCcchHHHHHHHh-cCCCeEecCC
Q 017533          296 RHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWFI-GLEVEHIDDR  345 (370)
Q Consensus       296 ~Y~~G~~YvlSrdla~~I~~~~~~l~~~~~EDV~lG~~l~-gL~v~~id~~  345 (370)
                      .++.|+++++.+++++.+.......  ...||..+...+. +-.+..+++.
T Consensus       150 ~~~~~~~~~~r~~~~~~~~~~~~~~--~~~~D~~~~~~~~~~~~~~~~~~~  198 (214)
T cd04196         150 NVVTGCTMAFNRELLELALPFPDAD--VIMHDWWLALLASAFGKVVFLDEP  198 (214)
T ss_pred             CccCCceeeEEHHHHHhhccccccc--cccchHHHHHHHHHcCceEEcchh
Confidence            4567999999999999886543332  4578888776554 3345555554

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1

Probab=87.58  E-value=6.4  Score=34.26  Aligned_cols=133  Identities=11%  Similarity=0.088  Sum_probs=73.6

Q ss_pred             ceEEEEEeecCCCCChhHHHHHHHHHhhCCCEEEeccccccccchhHHHHHHHHHHhcCCceEEEEecCceeecHHHHHH
Q 017533          171 GIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLAT  250 (370)
Q Consensus       171 ~i~v~FVvG~s~~~~~~~~~~I~~E~~~~~DIL~ld~~Dsy~nLt~Kt~~~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~  250 (370)
                      .+.++.|-..|.  ++. ...++....++..+..+....++    .|. .+++.+.+....+|++.+|+|.....+.|..
T Consensus        29 ~~eiivvdd~s~--d~t-~~~~~~~~~~~~~i~~i~~~~n~----G~~-~a~n~g~~~a~~d~i~~~D~D~~~~~~~l~~  100 (181)
T cd04187          29 DYEIIFVDDGST--DRT-LEILRELAARDPRVKVIRLSRNF----GQQ-AALLAGLDHARGDAVITMDADLQDPPELIPE  100 (181)
T ss_pred             CeEEEEEeCCCC--ccH-HHHHHHHHhhCCCEEEEEecCCC----CcH-HHHHHHHHhcCCCEEEEEeCCCCCCHHHHHH
Confidence            456666655543  222 23344444455556555543332    122 3444455556679999999999999888888


Q ss_pred             HHhhcCCCCceEEEEeecC--cccccCCCcccc-CCccccCCCCCccCccccCCeeeecHHHHHHHHH
Q 017533          251 TLSRHRSKPRVYIGCMKSG--PVLSQKNVKYHE-PEYWKFGEEGNKYFRHATGQIYAISKDLATYISI  315 (370)
Q Consensus       251 ~L~~~~~~~~lYiG~~~~~--pv~rd~~~K~~~-pe~w~f~y~~~~Yp~Y~~G~~YvlSrdla~~I~~  315 (370)
                      .+....+...+..|.....  +....-..+.+. .....    .....+...|+.+++++.+++.+..
T Consensus       101 l~~~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~r~~~~~i~~  164 (181)
T cd04187         101 MLAKWEEGYDVVYGVRKNRKESWLKRLTSKLFYRLINKL----SGVDIPDNGGDFRLMDRKVVDALLL  164 (181)
T ss_pred             HHHHHhCCCcEEEEEecCCcchHHHHHHHHHHHHHHHHH----cCCCCCCCCCCEEEEcHHHHHHHHh
Confidence            8877655556766764311  110000001110 00000    1123345678899999999998764

A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.

>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase

Probab=87.46  E-value=17  Score=32.88  Aligned_cols=126  Identities=17%  Similarity=0.163  Sum_probs=69.8

Q ss_pred             HHHHHHhcC--CceEEEEecCceeecHHHHHHHHhhcCCCCceEEEEeecCcccccCCCccccC-Ccccc----C--CCC
Q 017533          221 FFSTAVAKW--DADFYVKVDDDVHVNLGMLATTLSRHRSKPRVYIGCMKSGPVLSQKNVKYHEP-EYWKF----G--EEG  291 (370)
Q Consensus       221 ~~~wa~~~~--~a~F~lKvDDDvfVnl~~L~~~L~~~~~~~~lYiG~~~~~pv~rd~~~K~~~p-e~w~f----~--y~~  291 (370)
                      .+.++.+..  +.+|++..|+|+.+..+.|..++.... .+.+  |.+......++....++.. .+|.+    .  .+.
T Consensus        73 a~n~g~~~a~~~~d~i~~lD~D~~~~~~~l~~l~~~~~-~~~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (236)
T cd06435          73 ALNYALERTAPDAEIIAVIDADYQVEPDWLKRLVPIFD-DPRV--GFVQAPQDYRDGEESLFKRMCYAEYKGFFDIGMVS  149 (236)
T ss_pred             HHHHHHHhcCCCCCEEEEEcCCCCcCHHHHHHHHHHhc-CCCe--eEEecCccccCCCccHHHHHHhHHHHHHHHHHhcc
Confidence            566666653  479999999999999999999887764 3332  3221110111111111110 00100    0  000


Q ss_pred             -Cc-cCccccCCeeeecHHHHHHHHHhCCCcCCCCcchHHHHHHH--hcCCCeEecCCCceeCCCC
Q 017533          292 -NK-YFRHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWF--IGLEVEHIDDRNMCCQTPP  353 (370)
Q Consensus       292 -~~-Yp~Y~~G~~YvlSrdla~~I~~~~~~l~~~~~EDV~lG~~l--~gL~v~~id~~~fc~~~~~  353 (370)
                       .. -..++.|.+.+++++++..+---..   .+..||+-++.=+  .|..+..+++. ++....|
T Consensus       150 ~~~~~~~~~~g~~~~~rr~~~~~iGgf~~---~~~~eD~dl~~r~~~~G~~~~~~~~~-~~~~~~~  211 (236)
T cd06435         150 RNERNAIIQHGTMCLIRRSALDDVGGWDE---WCITEDSELGLRMHEAGYIGVYVAQS-YGHGLIP  211 (236)
T ss_pred             ccccCceEEecceEEEEHHHHHHhCCCCC---ccccchHHHHHHHHHCCcEEEEcchh-hccCcCc
Confidence             00 0124678889999999998743222   2358999998766  46666666653 4443343

NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.

>cd06423 CESA_like CESA_like is the cellulose synthase superfamily

Probab=87.45  E-value=5.6  Score=32.85  Aligned_cols=95  Identities=12%  Similarity=0.110  Sum_probs=51.4

Q ss_pred             HHHHHHHhcCCceEEEEecCceeecHHHHHHHHhhcCCCCc--eEEEEeec---C-cccccC-CCccccCCcccc-CCCC
Q 017533          220 IFFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRHRSKPR--VYIGCMKS---G-PVLSQK-NVKYHEPEYWKF-GEEG  291 (370)
Q Consensus       220 ~~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~~L~~~~~~~~--lYiG~~~~---~-pv~rd~-~~K~~~pe~w~f-~y~~  291 (370)
                      ..+.++.+..+.+|++.+|+|..+....|..++......+.  +..|....   . ...... ...+........ ....
T Consensus        68 ~~~n~~~~~~~~~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (180)
T cd06423          68 GALNAGLRHAKGDIVVVLDADTILEPDALKRLVVPFFADPKVGAVQGRVRVRNGSENLLTRLQAIEYLSIFRLGRRAQSA  147 (180)
T ss_pred             HHHHHHHHhcCCCEEEEECCCCCcChHHHHHHHHHhccCCCeeeEeeeEEEecCcCcceeccchheecceeeeeeehhhe
Confidence            44555666668999999999999998888877555443333  33333221   1 011000 001110000000 0001


Q ss_pred             CccCccccCCeeeecHHHHHHHH
Q 017533          292 NKYFRHATGQIYAISKDLATYIS  314 (370)
Q Consensus       292 ~~Yp~Y~~G~~YvlSrdla~~I~  314 (370)
                      ..++.++.|.+++++++++..+-
T Consensus       148 ~~~~~~~~g~~~~~~~~~~~~~g  170 (180)
T cd06423         148 LGGVLVLSGAFGAFRREALREVG  170 (180)
T ss_pred             ecceeecCchHHHHHHHHHHHhC
Confidence            23445678999999999988764

The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the

>cd06532 Glyco_transf_25 Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis

Probab=85.35  E-value=8  Score=32.83  Aligned_cols=116  Identities=10%  Similarity=0.032  Sum_probs=64.0

Q ss_pred             EEECCCCCHHHHHHHHHHhccCchhhHhhhccCceEEEEEeecCCCCChhHHHHHHHHHhhCCCEE-Eeccccccccchh
Q 017533          138 GINTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFL-RLEHIEGYHELSA  216 (370)
Q Consensus       138 ~V~S~~~~~~rR~aIR~TW~~~~~~l~~l~~~~~i~v~FVvG~s~~~~~~~~~~I~~E~~~~~DIL-~ld~~Dsy~nLt~  216 (370)
                      .|.+-+...+||+.+++.....           ++.+.|+-|-.+..  .....+......+.... .-+..-+.-.-.+
T Consensus         3 ~vInL~~~~~Rr~~~~~~~~~~-----------~~~~~~~~Avd~~~--~~~~~~~~~~~~~~~~~~~~~l~~gEiGC~l   69 (128)
T cd06532           3 FVINLDRSTDRRERMEAQLAAL-----------GLDFEFFDAVDGKD--LSEEELAALYDALFLPRYGRPLTPGEIGCFL   69 (128)
T ss_pred             EEEECCCCHHHHHHHHHHHHHc-----------CCCeEEEecccccc--CCHHHHHHHhHHHhhhhcCCCCChhhHHHHH
Confidence            4567788899999999855433           45566776665321  11111111111000000 0001111111122


Q ss_pred             HHHHHHHHHHhcCCceEEEEecCceeecHHHHHHHHhhcCCCCceEEEEeecCcccccCCCccccCCccccCCCCCccCc
Q 017533          217 KTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKYFR  296 (370)
Q Consensus       217 Kt~~~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~~L~~~~~~~~lYiG~~~~~pv~rd~~~K~~~pe~w~f~y~~~~Yp~  296 (370)
                      -.+..|+.+++ -+.++.+-..||+.+..+                                                  
T Consensus        70 SH~~~w~~~~~-~~~~~alIlEDDv~~~~~--------------------------------------------------   98 (128)
T cd06532          70 SHYKLWQKIVE-SNLEYALILEDDAILDPD--------------------------------------------------   98 (128)
T ss_pred             HHHHHHHHHHH-cCCCeEEEEccCcEECCC--------------------------------------------------
Confidence            33344444443 356889999999988776                                                  


Q ss_pred             cccCCeeeecHHHHHHHHHhCCC
Q 017533          297 HATGQIYAISKDLATYISINQPI  319 (370)
Q Consensus       297 Y~~G~~YvlSrdla~~I~~~~~~  319 (370)
                        ...+|+||+..|+++......
T Consensus        99 --~~~~Y~vs~~~A~~ll~~~~~  119 (128)
T cd06532          99 --GTAGYLVSRKGAKKLLAALEP  119 (128)
T ss_pred             --CceEEEeCHHHHHHHHHhCCC
Confidence              456799999999999987654

The members include the beta(1,4) galactosyltransferases: Lgt2 of Moraxella catarrhalis, LgtB and LgtE of Neisseria gonorrhoeae and Lic2A of Haemophilus influenzae. M. catarrhalis Lgt2 catalyzes the addition of galactose (Gal) to the growing chain of LOS on the cell surface. N. gonorrhoeae LgtB and LgtE link Gal-beta(1,4) to GlcNAc (N-acetylglucosamine) and Glc (glucose), respectively. The genes encoding LgtB and LgtE are two genes of a five gene locus involved in the synthesis of gonococcal LOS. LgtE is believed to perform the first step in LOS biosynthesis.

>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily

Probab=85.28  E-value=22  Score=32.76  Aligned_cols=122  Identities=13%  Similarity=0.068  Sum_probs=68.3

Q ss_pred             HHHHHHHhcCCceEEEEecCceeecHHHHHHHHhhcCCC-Cce-EEEE-eecCcccccCCCccccCCcc-ccC-----CC
Q 017533          220 IFFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRHRSK-PRV-YIGC-MKSGPVLSQKNVKYHEPEYW-KFG-----EE  290 (370)
Q Consensus       220 ~~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~~L~~~~~~-~~l-YiG~-~~~~pv~rd~~~K~~~pe~w-~f~-----y~  290 (370)
                      ..+..+.+....+|++.+|+|+.+..+.|...+...... +.+ ++|. +...........+.+..+++ .|.     ..
T Consensus        74 ~a~n~g~~~a~gd~i~~~DaD~~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (241)
T cd06427          74 KACNYALAFARGEYVVIYDAEDAPDPDQLKKAVAAFARLDDKLACVQAPLNYYNARENWLTRMFALEYAAWFDYLLPGLA  153 (241)
T ss_pred             HHHHHHHHhcCCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEeCceEeeCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence            355666666678999999999999999999988876532 343 2222 21110000000011100000 000     00


Q ss_pred             CCccCccccCCeeeecHHHHHHHHHhCCCcCCCCcchHHHHHHHh--cCCCeEecC
Q 017533          291 GNKYFRHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWFI--GLEVEHIDD  344 (370)
Q Consensus       291 ~~~Yp~Y~~G~~YvlSrdla~~I~~~~~~l~~~~~EDV~lG~~l~--gL~v~~id~  344 (370)
                      ....+..++|++.++++++++.+.--..   ....||..++.-+.  |..+..++.
T Consensus       154 ~~~~~~~~~g~~~~~rr~~~~~vgg~~~---~~~~eD~~l~~rl~~~G~r~~~~~~  206 (241)
T cd06427         154 RLGLPIPLGGTSNHFRTDVLRELGGWDP---FNVTEDADLGLRLARAGYRTGVLNS  206 (241)
T ss_pred             hcCCeeecCCchHHhhHHHHHHcCCCCc---ccchhhHHHHHHHHHCCceEEEecc
Confidence            0123334678889999999888743222   23479999987664  555666654

The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot

>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111

Probab=84.79  E-value=39  Score=34.72  Aligned_cols=127  Identities=11%  Similarity=0.124  Sum_probs=69.8

Q ss_pred             HHHHHHHhcCCceEEEEecCceeecHHHHHHHHhhcCCCCceE--EEEeecCcccccCCCcc---ccCCccccCCC----
Q 017533          220 IFFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRHRSKPRVY--IGCMKSGPVLSQKNVKY---HEPEYWKFGEE----  290 (370)
Q Consensus       220 ~~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~~L~~~~~~~~lY--iG~~~~~pv~rd~~~K~---~~pe~w~f~y~----  290 (370)
                      .+++++.+..+.+|++..|+|..+..+.|...+......+++-  .|.+...+...+....+   +..+.-.+.|.    
T Consensus       121 ~AlN~gl~~s~g~~v~~~DaD~~~~~d~L~~l~~~f~~~~~v~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l  200 (439)
T TIGR03111       121 KALNAAIYNSIGKYIIHIDSDGKLHKDAIKNMVTRFENNPDIHAMTGVILTDKELIEKTKGRFLKLIRRCEYFEYAQAFL  200 (439)
T ss_pred             HHHHHHHHHccCCEEEEECCCCCcChHHHHHHHHHHHhCCCeEEEEeEEecCchhhhhhcchhhhHhHHhHHHHHHHHHH
Confidence            3566777777899999999999999999998888775444442  23332211100000000   11000000000    


Q ss_pred             -------CCccCccccCCeeeecHHHHHHHHHhCCCcCCCCcchHHHHHHH---hcCCCeEecCCCcee
Q 017533          291 -------GNKYFRHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWF---IGLEVEHIDDRNMCC  349 (370)
Q Consensus       291 -------~~~Yp~Y~~G~~YvlSrdla~~I~~~~~~l~~~~~EDV~lG~~l---~gL~v~~id~~~fc~  349 (370)
                             ....+..++|++.++.++++..+.--.   +..-.||..++.-+   .|-.+....+..+..
T Consensus       201 ~~r~~~s~~~~~~~~sGa~~~~Rr~~l~~vggf~---~~~i~ED~~l~~rl~~~~g~kv~~~~~a~~~~  266 (439)
T TIGR03111       201 AGRNFESQVNSLFTLSGAFSAFRRETILKTQLYN---SETVGEDTDMTFQIRELLDGKVYLCENAIFYV  266 (439)
T ss_pred             hhhHHHHhcCCeEEEccHHHhhhHHHHHHhCCCC---CCCcCccHHHHHHHHHhcCCeEEECCCCEEEE
Confidence                   001122357888889999877653211   12248999998644   244555555555544

Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).

>COG1216 Predicted glycosyltransferases [General function prediction only]

Probab=84.03  E-value=7.6  Score=37.72  Aligned_cols=147  Identities=14%  Similarity=0.107  Sum_probs=82.4

Q ss_pred             CCCEEEeccccccccchhHHHHHHHHHHhcCCceEEEEecCceeecHHHHHHHHhhcCCCCceE-EEEe-e--cCccc--
Q 017533          199 HKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRHRSKPRVY-IGCM-K--SGPVL--  272 (370)
Q Consensus       199 ~~DIL~ld~~Dsy~nLt~Kt~~~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~~L~~~~~~~~lY-iG~~-~--~~pv~--  272 (370)
                      +.++..+...++.-= ..=.-..++.|....+. |++-.++|+.+..+.|.+++......+... .|.. .  .++..  
T Consensus        55 ~~~v~~i~~~~NlG~-agg~n~g~~~a~~~~~~-~~l~LN~D~~~~~~~l~~ll~~~~~~~~~~~~~~~i~~~~~~~~~~  132 (305)
T COG1216          55 FPNVRLIENGENLGF-AGGFNRGIKYALAKGDD-YVLLLNPDTVVEPDLLEELLKAAEEDPAAGVVGPLIRNYDESLYID  132 (305)
T ss_pred             CCcEEEEEcCCCccc-hhhhhHHHHHHhcCCCc-EEEEEcCCeeeChhHHHHHHHHHHhCCCCeEeeeeEecCCCCcchh
Confidence            678877765554321 11111456666554322 999999999999999999998876554333 3332 1  11110  


Q ss_pred             -ccC-----CCcc-ccCCccccC---CCCCccCccccCCeeeecHHHHHHHHHhCCCcCCCCcchHHHHHHH--hcCCCe
Q 017533          273 -SQK-----NVKY-HEPEYWKFG---EEGNKYFRHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWF--IGLEVE  340 (370)
Q Consensus       273 -rd~-----~~K~-~~pe~w~f~---y~~~~Yp~Y~~G~~YvlSrdla~~I~~~~~~l~~~~~EDV~lG~~l--~gL~v~  340 (370)
                       ...     ...| +.+.. ...   .+.....++++|++.+|++++.+.+-. ...--.+..||+-++.=+  .|..+.
T Consensus       133 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~G~~~li~~~~~~~vG~-~de~~F~y~eD~D~~~R~~~~G~~i~  210 (305)
T COG1216         133 RRGGESDGLTGGWRASPLL-EIAPDLSSYLEVVASLSGACLLIRREAFEKVGG-FDERFFIYYEDVDLCLRARKAGYKIY  210 (305)
T ss_pred             eeccccccccccceecccc-cccccccchhhhhhhcceeeeEEcHHHHHHhCC-CCcccceeehHHHHHHHHHHcCCeEE
Confidence             110     0011 11100 000   001112225789999999999999976 333224469999999766  455555


Q ss_pred             EecCCCcee
Q 017533          341 HIDDRNMCC  349 (370)
Q Consensus       341 ~id~~~fc~  349 (370)
                      .+.+....|
T Consensus       211 ~~p~a~i~H  219 (305)
T COG1216         211 YVPDAIIYH  219 (305)
T ss_pred             EeeccEEEE
Confidence            555555544

>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase

Probab=82.65  E-value=9.6  Score=32.85  Aligned_cols=101  Identities=15%  Similarity=0.128  Sum_probs=59.4

Q ss_pred             HHHHHHhcCCceEEEEecCceeecHHHHHHHHhhcCCCCceEEEEeecCcccccCCCccccCCccccCCCCCccCccccC
Q 017533          221 FFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKYFRHATG  300 (370)
Q Consensus       221 ~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~~L~~~~~~~~lYiG~~~~~pv~rd~~~K~~~pe~w~f~y~~~~Yp~Y~~G  300 (370)
                      .+..+.+....+|++..|+|..+..+.|...+....+. ....|....            ....        .-.....|
T Consensus        70 ~~n~g~~~a~g~~i~~lD~D~~~~~~~l~~~~~~~~~~-~~v~g~~~~------------~~~~--------~~~~~~~~  128 (182)
T cd06420          70 IRNKAIAAAKGDYLIFIDGDCIPHPDFIADHIELAEPG-VFLSGSRVL------------LNEK--------LTERGIRG  128 (182)
T ss_pred             HHHHHHHHhcCCEEEEEcCCcccCHHHHHHHHHHhCCC-cEEecceee------------cccc--------cceeEecc
Confidence            34455555678999999999999988888887766322 222232110            0000        00023467


Q ss_pred             CeeeecHHHHHHHHHhCCCcCCCCcchHHHHHHHh--cCCCeEe
Q 017533          301 QIYAISKDLATYISINQPILHKFANEDVSLGSWFI--GLEVEHI  342 (370)
Q Consensus       301 ~~YvlSrdla~~I~~~~~~l~~~~~EDV~lG~~l~--gL~v~~i  342 (370)
                      +.+++.+..+..+.--.+....+..||+.++.-+.  |+.+..+
T Consensus       129 ~~~~~~r~~~~~~ggf~~~~~~~~~eD~~l~~r~~~~g~~~~~~  172 (182)
T cd06420         129 CNMSFWKKDLLAVNGFDEEFTGWGGEDSELVARLLNSGIKFRKL  172 (182)
T ss_pred             ceEEEEHHHHHHhCCCCcccccCCcchHHHHHHHHHcCCcEEEe
Confidence            77888888777543323333334579999987664  4444444

Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm

>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis

Probab=81.87  E-value=9.2  Score=33.03  Aligned_cols=119  Identities=12%  Similarity=-0.027  Sum_probs=66.6

Q ss_pred             HHHHHHHhcCCceEEEEecCceeecHHHHHHHHhhcC--CCCceEEEEee--cCcccccCCCccccCCccccCCCCCccC
Q 017533          220 IFFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRHR--SKPRVYIGCMK--SGPVLSQKNVKYHEPEYWKFGEEGNKYF  295 (370)
Q Consensus       220 ~~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~~L~~~~--~~~~lYiG~~~--~~pv~rd~~~K~~~pe~w~f~y~~~~Yp  295 (370)
                      ..+..+.+..+.+|++..|+|..+..+.+...+....  +...+..|...  .+.. .....+...+..    .......
T Consensus        65 ~a~n~~~~~a~~~~v~~ld~D~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~  139 (202)
T cd06433          65 DAMNKGIALATGDIIGFLNSDDTLLPGALLAVVAAFAEHPEVDVVYGDVLLVDENG-RVIGRRRPPPFL----DKFLLYG  139 (202)
T ss_pred             HHHHHHHHHcCCCEEEEeCCCcccCchHHHHHHHHHHhCCCccEEEeeeEEEcCCC-CcccCCCCcchh----hhHHhhc
Confidence            4455666667899999999999999998888874332  33455556532  1111 000111000110    0011233


Q ss_pred             ccccCCeeeecHHHHHHHHHhCCCcCCCCcchHHHHHHH--hcCCCeEecCC
Q 017533          296 RHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWF--IGLEVEHIDDR  345 (370)
Q Consensus       296 ~Y~~G~~YvlSrdla~~I~~~~~~l~~~~~EDV~lG~~l--~gL~v~~id~~  345 (370)
                      .+..|++.++++++...+..-...+  ...||..+..-+  .|..+.+++..
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~f~~~~--~~~~D~~~~~r~~~~g~~~~~~~~~  189 (202)
T cd06433         140 MPICHQATFFRRSLFEKYGGFDESY--RIAADYDLLLRLLLAGKIFKYLPEV  189 (202)
T ss_pred             CcccCcceEEEHHHHHHhCCCchhh--CchhhHHHHHHHHHcCCceEecchh
Confidence            4567888899999998875322222  235787776555  45555555443

Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily

Probab=81.17  E-value=13  Score=32.04  Aligned_cols=136  Identities=9%  Similarity=-0.019  Sum_probs=70.7

Q ss_pred             ceEEEEEeecCCCCChhHHHHHHHHHhhCCCEEEeccccccccchhHHHHHHHHHHhcCCceEEEEecCceeecHHHHHH
Q 017533          171 GIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLAT  250 (370)
Q Consensus       171 ~i~v~FVvG~s~~~~~~~~~~I~~E~~~~~DIL~ld~~Dsy~nLt~Kt~~~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~  250 (370)
                      ...++.+...+.   +.....++.-..++..+..+...++..     .-..+..+.+....+|++..|+|..+..+.|..
T Consensus        28 ~~eiivvd~~s~---d~~~~~~~~~~~~~~~~~~~~~~~n~G-----~~~a~n~g~~~a~gd~i~~lD~D~~~~~~~l~~   99 (185)
T cd04179          28 DYEIIVVDDGST---DGTAEIARELAARVPRVRVIRLSRNFG-----KGAAVRAGFKAARGDIVVTMDADLQHPPEDIPK   99 (185)
T ss_pred             CEEEEEEcCCCC---CChHHHHHHHHHhCCCeEEEEccCCCC-----ccHHHHHHHHHhcCCEEEEEeCCCCCCHHHHHH
Confidence            345555544443   233444555555566655555444332     123444445555569999999999999998888


Q ss_pred             HHhh-cCCCCceEEEEeec-CcccccC-CCccccC-CccccCCCCCccCccccCCeeeecHHHHHHHH
Q 017533          251 TLSR-HRSKPRVYIGCMKS-GPVLSQK-NVKYHEP-EYWKFGEEGNKYFRHATGQIYAISKDLATYIS  314 (370)
Q Consensus       251 ~L~~-~~~~~~lYiG~~~~-~pv~rd~-~~K~~~p-e~w~f~y~~~~Yp~Y~~G~~YvlSrdla~~I~  314 (370)
                      ++.. ......+..|.... .+....+ ..++... ..+.+..-...-.....|+.+++++++++.+.
T Consensus       100 l~~~~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~i~  167 (185)
T cd04179         100 LLEKLLEGGADVVIGSRFVRGGGAGMPLLRRLGSRLFNFLIRLLLGVRISDTQSGFRLFRREVLEALL  167 (185)
T ss_pred             HHHHHhccCCcEEEEEeecCCCcccchHHHHHHHHHHHHHHHHHcCCCCcCCCCceeeeHHHHHHHHH
Confidence            8886 44445666665321 1100000 0000000 00000000111223356888899999999986

DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex

>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis

Probab=81.01  E-value=37  Score=29.65  Aligned_cols=118  Identities=12%  Similarity=0.121  Sum_probs=62.9

Q ss_pred             HHHHHHHhcCCceEEEEecCceeecHHHHHHHHhhcCCCC--ceEEEEeec-CcccccCCCccccCCccccCCCCCccCc
Q 017533          220 IFFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRHRSKP--RVYIGCMKS-GPVLSQKNVKYHEPEYWKFGEEGNKYFR  296 (370)
Q Consensus       220 ~~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~~L~~~~~~~--~lYiG~~~~-~pv~rd~~~K~~~pe~w~f~y~~~~Yp~  296 (370)
                      ..+.++.+....+|++..|+|..+..+.|...++.....+  .+..+.... ... ......++.+. |...   ..+..
T Consensus        73 ~a~n~g~~~a~~d~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~-~~~~---~~~~~  147 (202)
T cd04184          73 AATNSALELATGEFVALLDHDDELAPHALYEVVKALNEHPDADLIYSDEDKIDEG-GKRSEPFFKPD-WSPD---LLLSQ  147 (202)
T ss_pred             HHHHHHHHhhcCCEEEEECCCCcCChHHHHHHHHHHHhCCCCCEEEccHHhccCC-CCEeccccCCC-CCHH---Hhhhc
Confidence            3455555556789999999999999998888887763222  333232110 000 00001111111 1110   01111


Q ss_pred             cccCCeeeecHHHHHHHHHhCCCcCCCCcchHHHHHHHh--cCCCeEecC
Q 017533          297 HATGQIYAISKDLATYISINQPILHKFANEDVSLGSWFI--GLEVEHIDD  344 (370)
Q Consensus       297 Y~~G~~YvlSrdla~~I~~~~~~l~~~~~EDV~lG~~l~--gL~v~~id~  344 (370)
                      -+.|++-+++++++..+.--...  ....||.-++.-+.  |..+.++++
T Consensus       148 ~~~~~~~~~~r~~~~~iggf~~~--~~~~eD~~l~~rl~~~g~~~~~~~~  195 (202)
T cd04184         148 NYIGHLLVYRRSLVRQVGGFREG--FEGAQDYDLVLRVSEHTDRIAHIPR  195 (202)
T ss_pred             CCccceEeEEHHHHHHhCCCCcC--cccchhHHHHHHHHhccceEEEccH
Confidence            13456667899988877532221  22469988887764  444555554

The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	370
2j0a_A	280	Beta-1,3-N-acetylglucosaminyltransferase manic FR;	2e-05

>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A* Length = 280

 Score = 44.7 bits (105), Expect = 2e-05
 Identities = 30/177 (16%), Positives = 58/177 (32%), Gaps = 25/177 (14%)

Query: 135 VVIGINTAFSS-RKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAID 193
           + I + T ++  R R D + DTW+ +  +                    T +   D+ + 
Sbjct: 15  IFIAVKTTWAFHRSRLDLLLDTWVSRIRQ---------------QTFIFTDSP--DERLQ 57

Query: 194 SEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLATTLS 253
                H    +      +  LS K    F   +      ++  VDDD +VN   L   L 
Sbjct: 58  ERLGPHLVVTQCSAEHSHPALSCKMAAEFDAFL-VSGLRWFCHVDDDNYVNPKALLQLLK 116

Query: 254 RHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLA 310
                  VY+G       +    ++  +           +++    G  + I++ LA
Sbjct: 117 TFPQDRDVYVGKPSLNRPIHASELQSKQRTKL------VRFWFATGGAGFCINRQLA 167

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	370
2j0a_A	280	Beta-1,3-N-acetylglucosaminyltransferase manic FR;	99.91
1xhb_A	472	Polypeptide N-acetylgalactosaminyltransferase 1; g	95.51
2d7i_A	570	Polypeptide N-acetylgalactosaminyltransferase 10;	94.42
2ffu_A	501	Ppgalnact-2, polypeptide N-acetylgalactosaminyltra	93.64
3bcv_A	240	Putative glycosyltransferase protein; protein stru	91.83
4fix_A	657	UDP-galactofuranosyl transferase GLFT2; CAZY GT-2	90.95
2z86_A	625	Chondroitin synthase; GT-A, glycosyltransferase A,	90.11
1qg8_A	255	Protein (spore coat polysaccharide biosynthesis P	89.89
4hg6_A	802	Cellulose synthase subunit A; membrane translocati	84.61

>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*

Probab=99.91  E-value=6.9e-24  Score=203.66  Aligned_cols=194  Identities=17%  Similarity=0.163  Sum_probs=130.8

Q ss_pred             CCCeEEEEEEECCCCC-HHHHHHHHHHhccCchhhHhhhccCceEEEEEeecCCCCChhHHHHHHHHHhhCCCEEEeccc
Q 017533          130 RPKVFVVIGINTAFSS-RKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHI  208 (370)
Q Consensus       130 ~~~~~llI~V~S~~~~-~~rR~aIR~TW~~~~~~l~~l~~~~~i~v~FVvG~s~~~~~~~~~~I~~E~~~~~DIL~ld~~  208 (370)
                      ...-.|+|+|+|++++ .+|+.+||+||++....          . .||.+...  +..    +...  ..++++..++.
T Consensus        10 ~~~~~I~~~V~T~~~~~~~R~~~I~~TW~~~~~~----------~-~fifsd~~--d~~----l~~~--~~~~~~~~~~~   70 (280)
T 2j0a_A           10 LQLGDIFIAVKTTWAFHRSRLDLLLDTWVSRIRQ----------Q-TFIFTDSP--DER----LQER--LGPHLVVTQCS   70 (280)
T ss_dssp             CCGGGEEEEEECCGGGTTTTHHHHHHTGGGGSGG----------G-EEEEESSC--CHH----HHHH--HGGGEEECCC-
T ss_pred             CCcccEEEEEECcHHHHHHHHHHHHHHHhccCCC----------c-eEEEcCCC--ccc----cccc--ccccceecccc
Confidence            3445788999999984 57899999999986531          1 24333332  222    2222  24578887764


Q ss_pred             --cccccchhHHHHHHHHHHhcCCceEEEEecCceeecHHHHHHHHhhcCCCCceEEEEeecCcccccCCCccccCCccc
Q 017533          209 --EGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWK  286 (370)
Q Consensus       209 --Dsy~nLt~Kt~~~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~~L~~~~~~~~lYiG~~~~~pv~rd~~~K~~~pe~w~  286 (370)
                        +++.+++.|+...+.+.. ..+++|++|+|||+|||+++|..+|..+++..++|+|+.....+++   .+++.|.+. 
T Consensus        71 ~~~~~~~l~~K~~~~~~~~l-~~~~~Wf~~~DDDtyv~~~nL~~~L~~~d~~~~~YiG~~~~~~~~~---~~~~~~~~~-  145 (280)
T 2j0a_A           71 AEHSHPALSCKMAAEFDAFL-VSGLRWFCHVDDDNYVNPKALLQLLKTFPQDRDVYVGKPSLNRPIH---ASELQSKQR-  145 (280)
T ss_dssp             ------CCCHHHHHHHHHHH-HHTCSEEEEEETTEEECHHHHHHHHTTSCTTSCCEEECEEC------------------
T ss_pred             ccccccchHHHHHHHHHHHh-CCCCcEEEEeCCCcEEcHHHHHHHHHhCCCCCCEEEEEeccCcccc---ccccCcccc-
Confidence              467889999999998754 3699999999999999999999999999999999999864322222   134444320 


Q ss_pred             cCCCCCccCccc-cCCeeeecHHHHHHHHHhCCCc-------CCCCcchHHHHHHHh-cCCCeEecCCCceeC
Q 017533          287 FGEEGNKYFRHA-TGQIYAISKDLATYISINQPIL-------HKFANEDVSLGSWFI-GLEVEHIDDRNMCCQ  350 (370)
Q Consensus       287 f~y~~~~Yp~Y~-~G~~YvlSrdla~~I~~~~~~l-------~~~~~EDV~lG~~l~-gL~v~~id~~~fc~~  350 (370)
                        ++...| +|| +|+||+||++++++|+......       .....||+++|.|+. .++|...++..|...
T Consensus       146 --~~~~~~-~y~~GGaG~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~~Fh~~  215 (280)
T 2j0a_A          146 --TKLVRF-WFATGGAGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSPLFHSH  215 (280)
T ss_dssp             -------C-CEECGGGCEEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECTTCCCS
T ss_pred             --cccccc-CcccCCCEEEECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceecccccCC
Confidence              111234 466 5689999999999999743221       233479999999998 999999999999653

>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17

Probab=95.51  E-value=0.3  Score=48.46  Aligned_cols=171  Identities=13%  Similarity=0.103  Sum_probs=92.0

Q ss_pred             eEEEEEeecCCCCChhHHHHHHHHHhhCC-CEEEeccccccccchhHHHHHHHHHHhcCCceEEEEecCceeecHHHHHH
Q 017533          172 IIIRFMIGHSATSNSILDKAIDSEDAQHK-DFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLAT  250 (370)
Q Consensus       172 i~v~FVvG~s~~~~~~~~~~I~~E~~~~~-DIL~ld~~Dsy~nLt~Kt~~~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~  250 (370)
                      ..++.|-..|.  ++.....+++-.+++. .+..+...++..     .-.+...+.+....+|++..|+|+.+..+.|..
T Consensus        62 ~EIIvVDd~S~--d~~t~~~l~~~~~~~~~~v~vi~~~~n~G-----~~~a~N~g~~~A~gd~i~flD~D~~~~p~~L~~  134 (472)
T 1xhb_A           62 EEIVLVDDASE--RDFLKRPLESYVKKLKVPVHVIRMEQRSG-----LIRARLKGAAVSRGQVITFLDAHCECTAGWLEP  134 (472)
T ss_dssp             EEEEEEECSCC--CGGGTHHHHHHHHSSSSCEEEEECSSCCC-----HHHHHHHHHHHCCSSEEEEEESSEEECTTCHHH
T ss_pred             eEEEEEECCCC--cHHHHHHHHHHHHHCCCcEEEEECCCCCC-----hHHHHHHHHHhccCCeEEEECCCeEeCccHHHH
Confidence            35555554443  2233444555455666 455555433321     223444555566799999999999999988888


Q ss_pred             HHhhcCCCCce-EEEEee--c-CcccccCCC-------ccccCCcccc--------C--C-CCCccCccccCCeeeecHH
Q 017533          251 TLSRHRSKPRV-YIGCMK--S-GPVLSQKNV-------KYHEPEYWKF--------G--E-EGNKYFRHATGQIYAISKD  308 (370)
Q Consensus       251 ~L~~~~~~~~l-YiG~~~--~-~pv~rd~~~-------K~~~pe~w~f--------~--y-~~~~Yp~Y~~G~~YvlSrd  308 (370)
                      ++......+.+ ..|.+.  . .........       .|.....|..        .  . ......+++.|++++++++
T Consensus       135 ll~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~  214 (472)
T 1xhb_A          135 LLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRD  214 (472)
T ss_dssp             HHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHH
T ss_pred             HHHHHHhCCCEEEEeeeeeEcCCCceeccCCCcccceeeccceeecccCCHHHHhcccCCCCCcccCccccceeEEEEHH
Confidence            87766443433 333321  1 111000000       0111100100        0  0 0123345688999999999


Q ss_pred             HHHHHHHhCCCcCCCCcchHHHHH--HHhcCCCeEecCCCcee
Q 017533          309 LATYISINQPILHKFANEDVSLGS--WFIGLEVEHIDDRNMCC  349 (370)
Q Consensus       309 la~~I~~~~~~l~~~~~EDV~lG~--~l~gL~v~~id~~~fc~  349 (370)
                      +...+---.+.+..+..||+-++.  |..|..+..++.....|
T Consensus       215 ~~~~iGgfde~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H  257 (472)
T 1xhb_A          215 YFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGH  257 (472)
T ss_dssp             HHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred             HHHHcCCCCCcccccCchhHHHHHHHHhcCCeEEEccCcEEEE
Confidence            998876433444444578888775  44677666665544443

>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*

Probab=94.42  E-value=0.81  Score=47.02  Aligned_cols=170  Identities=12%  Similarity=0.056  Sum_probs=91.1

Q ss_pred             EEEEEeecCCCCChhHHHHHHHHHhhCCCEEEeccccccccchhHHHHHHHHHHhcCCceEEEEecCceeecHHHHHHHH
Q 017533          173 IIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLATTL  252 (370)
Q Consensus       173 ~v~FVvG~s~~~~~~~~~~I~~E~~~~~DIL~ld~~Dsy~nLt~Kt~~~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~~L  252 (370)
                      .++.|-..|.  ++++...+++-.+++..|..+...++. .    .-.+...+.+....+|++..|+|+.++.+.|..++
T Consensus       146 EIIVVDDgS~--D~tl~~~l~~~~~~~~~v~vi~~~~n~-G----~~~A~N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll  218 (570)
T 2d7i_A          146 EIVLVDDFSD--REHLKKPLEDYMALFPSVRILRTKKRE-G----LIRTRMLGASVATGDVITFLDSHCEANVNWLPPLL  218 (570)
T ss_dssp             EEEEEECSCC--CGGGTHHHHHHHTTSTTEEEEECSSCC-C----HHHHHHHHHHHCCSSEEEECCSSEEECTTCSHHHH
T ss_pred             EEEEEECCCC--cHHHHHHHHHHHHhCCeEEEEECCCCC-C----HHHHHHHHHHhcCCCEEEEEcCCccccccHHHHHH
Confidence            5555554443  334344555555666666555443321 2    22334445555678999999999999988777777


Q ss_pred             hhcCCCCceEEEE-ee--cCc-c-cccC-CCccccCCccccCC--------------CCCccCccccCCeeeecHHHHHH
Q 017533          253 SRHRSKPRVYIGC-MK--SGP-V-LSQK-NVKYHEPEYWKFGE--------------EGNKYFRHATGQIYAISKDLATY  312 (370)
Q Consensus       253 ~~~~~~~~lYiG~-~~--~~p-v-~rd~-~~K~~~pe~w~f~y--------------~~~~Yp~Y~~G~~YvlSrdla~~  312 (370)
                      ......+.+.+|. +.  .+. . .+.. .......-.|.+.+              ......+++.|+++++++++...
T Consensus       219 ~~l~~~~~~vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~  298 (570)
T 2d7i_A          219 DRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFWE  298 (570)
T ss_dssp             HHHHHCTTEEEEEEEEEECTTTCCEECCTTSSCEEEECTTCCEEEECCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHHH
T ss_pred             HHHHhCCCEEEeeeeeccCCCchhhccccCCcccccccccccccccccchhhhccCCCcceecccccceEEEEEHHHHHh
Confidence            6654444444443 21  111 0 0000 00000000111100              01122345789999999999988


Q ss_pred             HHHhCCCcCCCCcchHHHHHHH--hcCCCeEecCCCcee
Q 017533          313 ISINQPILHKFANEDVSLGSWF--IGLEVEHIDDRNMCC  349 (370)
Q Consensus       313 I~~~~~~l~~~~~EDV~lG~~l--~gL~v~~id~~~fc~  349 (370)
                      +---...+..+..||+-+..-+  .|..+..++.....+
T Consensus       299 iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H  337 (570)
T 2d7i_A          299 LGGYDPGLEIWGGEQYEISFKVWMCGGRMEDIPCSRVGH  337 (570)
T ss_dssp             TTSSCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred             cCCCCCcccccCcchHHHHHHHHhCCCeEEEccCeEEEE
Confidence            8543344444447998887544  566666555544443

>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*

Probab=93.64  E-value=1.2  Score=44.51  Aligned_cols=167  Identities=10%  Similarity=0.021  Sum_probs=89.4

Q ss_pred             eEEEEEeecCCCCChhHHHHHHHHHhhCCCEEEeccccccccchhHHHHHHHHHHhcCCceEEEEecCceeecHHHHHHH
Q 017533          172 IIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLATT  251 (370)
Q Consensus       172 i~v~FVvG~s~~~~~~~~~~I~~E~~~~~DIL~ld~~Dsy~nLt~Kt~~~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~~  251 (370)
                      +.+++|-..|.  ++++.    ...+++..+-.+...++.   -  .-.+...+.+....+|++..|+|..+.++.|..+
T Consensus        99 ~EIIvVDDgS~--D~t~~----~~~~~~~~v~vi~~~~n~---G--~~~A~N~G~~~A~gd~i~flD~D~~~~p~~L~~l  167 (501)
T 2ffu_A           99 KEIILVDDYSN--DPEDG----ALLGKIEKVRVLRNDRRE---G--LMRSRVRGADAAQAKVLTFLDSHCECNEHWLEPL  167 (501)
T ss_dssp             EEEEEEECSCS--CTHHH----HGGGGBTTEEEEECSSCC---H--HHHHHHHHHHHCCSSEEEECCSSEEECTTCHHHH
T ss_pred             eeEEEEECCCC--chHHH----HHHhcCCCEEEEECCCCc---C--HHHHHHHHHHhcCCCEEEEECCCcccCccHHHHH
Confidence            35666655443  23322    223445556555443322   1  2344555566668999999999999998888888


Q ss_pred             HhhcCCCCceEEE-Eee--c-Cccc-cc--C---C-CccccCCcccc-----------CCCCCccCccccCCeeeecHHH
Q 017533          252 LSRHRSKPRVYIG-CMK--S-GPVL-SQ--K---N-VKYHEPEYWKF-----------GEEGNKYFRHATGQIYAISKDL  309 (370)
Q Consensus       252 L~~~~~~~~lYiG-~~~--~-~pv~-rd--~---~-~K~~~pe~w~f-----------~y~~~~Yp~Y~~G~~YvlSrdl  309 (370)
                      +......+...++ .+.  . .... ..  .   + -.|.....|..           ........+++.|++.++++++
T Consensus       168 l~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~  247 (501)
T 2ffu_A          168 LERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFY  247 (501)
T ss_dssp             HHHHHHCTTEEEEEEEEEECTTTCCEECBCSSEEEEECTTCCEEEEECCHHHHHHTSSCTTSCEECSSCCSSSEEEEHHH
T ss_pred             HHHHHhCCCeEEEeeeccCcCCCceeecCCcccceEeeecCCCccccCCHHHHhhccCCCCCcccCccccceEEEEEHHH
Confidence            7765443333333 221  1 1000 00  0   0 00110000100           0001223456789999999999


Q ss_pred             HHHHHHhCCCcCCCCcchHHHHHH--HhcCCCeEecCCCcee
Q 017533          310 ATYISINQPILHKFANEDVSLGSW--FIGLEVEHIDDRNMCC  349 (370)
Q Consensus       310 a~~I~~~~~~l~~~~~EDV~lG~~--l~gL~v~~id~~~fc~  349 (370)
                      ...+---...+..+..||+-+..-  ..|..+..++...+.|
T Consensus       248 ~~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H  289 (501)
T 2ffu_A          248 FEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGH  289 (501)
T ss_dssp             HHHTTCCCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred             HHHhCCCCccccccCcchHHHHHHHHhcCCeEEEccCcEEEE
Confidence            988864334444445899988754  4676666665544444

>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}

Probab=91.83  E-value=4.3  Score=35.33  Aligned_cols=166  Identities=13%  Similarity=0.056  Sum_probs=83.4

Q ss_pred             ceEEEEEeecCCCCChhHHHHHHHHHhhCCCEEEeccccccccchhHHHHHHHHHHhcCCceEEEEecCceeecHHHHHH
Q 017533          171 GIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLAT  250 (370)
Q Consensus       171 ~i~v~FVvG~s~~~~~~~~~~I~~E~~~~~DIL~ld~~Dsy~nLt~Kt~~~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~  250 (370)
                      .+.++.|-..|.  ++ ....+++-.+++..+..+. .+   |.-  .-.....+.+....+|++.+|+|.++..+.|..
T Consensus        34 ~~eiIvvDd~S~--d~-t~~~~~~~~~~~~~i~~i~-~~---n~G--~~~a~N~g~~~a~g~~i~~lD~Dd~~~~~~l~~  104 (240)
T 3bcv_A           34 DIEIILIDDESP--DN-CPKICDDYAAQYPNIKVIH-KK---NAG--LGMACNSGLDVATGEYVAFCDSDDYVDSDMYMT  104 (240)
T ss_dssp             SEEEEEEECCCS--SS-HHHHHHHHHHHCSSEEEEE-CC---CCC--HHHHHHHHHHHCCSSEEEECCTTCCCCTTHHHH
T ss_pred             CeEEEEEECCCC--cC-HHHHHHHHHhhCCCEEEEE-CC---CCC--hHHHHHHHHHHcCCCEEEEECCCCcCCHHHHHH
Confidence            456666654443  22 2334444445566666554 22   222  234455666667889999999999999888877


Q ss_pred             HHhhcCC-CCceEEEEee----cCc----cccc-CCCccccCCcc-----ccCCCCCcc---C-ccccCCeeeecHHHHH
Q 017533          251 TLSRHRS-KPRVYIGCMK----SGP----VLSQ-KNVKYHEPEYW-----KFGEEGNKY---F-RHATGQIYAISKDLAT  311 (370)
Q Consensus       251 ~L~~~~~-~~~lYiG~~~----~~p----v~rd-~~~K~~~pe~w-----~f~y~~~~Y---p-~Y~~G~~YvlSrdla~  311 (370)
                      .+..... ...+.+|...    .+.    +... ....++....+     .+......+   + ...+|++.++.++++.
T Consensus       105 l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~  184 (240)
T 3bcv_A          105 MYNVAQKYTCDAVFTGLKRITMAGIPTGTVTHQKEFKLYKNKNEIHTLLKDLIASDPYAREERAIQVSAKVVLYRRNLIE  184 (240)
T ss_dssp             HHHHHHHHTCSEEEC--------------------CEEECSHHHHHHHHGGGTSSCHHHHHHHHHHHTCSCEEEEHHHHH
T ss_pred             HHHHHHhcCCCEEEEeeEEEccCCccccccccccccccccCHHHHHHHHHHHhhcchhhccccccccchhheeeeHHHHH
Confidence            7766533 3445444321    111    1000 00011111000     000000000   0 0145788999999998


Q ss_pred             HHHHhCCCcCCCCcchHHHHHHH--hcCCCeEecCC
Q 017533          312 YISINQPILHKFANEDVSLGSWF--IGLEVEHIDDR  345 (370)
Q Consensus       312 ~I~~~~~~l~~~~~EDV~lG~~l--~gL~v~~id~~  345 (370)
                      .+-.....-..+..||..+..-+  .|..+..+++.
T Consensus       185 ~~g~~f~~~~~~~~eD~~~~~r~~~~g~~i~~~~~~  220 (240)
T 3bcv_A          185 KKHLRFVSERILPSEDLIFNVDVLANSNIVCVLPQT  220 (240)
T ss_dssp             HTTCCCCCTTTCTTHHHHHHHHHHTTCSCEEECC--
T ss_pred             HcCCccCCCCCccCCCHHHHHHHHHhCCEEEEECCC
Confidence            86422222112346999998755  45667777664

>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*

Probab=90.95  E-value=4.1  Score=42.81  Aligned_cols=127  Identities=16%  Similarity=0.146  Sum_probs=72.9

Q ss_pred             HHHHHHhcCCceEEEEecCceeecHHHHHHHHhhcCC--CCceEEEEee--cCcccccCCCcccc---------CCc-c-
Q 017533          221 FFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRHRS--KPRVYIGCMK--SGPVLSQKNVKYHE---------PEY-W-  285 (370)
Q Consensus       221 ~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~~L~~~~~--~~~lYiG~~~--~~pv~rd~~~K~~~---------pe~-w-  285 (370)
                      +++.|....+++|++..|||+.+..+.|..++.....  ...+..|.+.  ..+..-...+.+..         +.. + 
T Consensus       259 Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  338 (657)
T 4fix_A          259 VMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHAEYD  338 (657)
T ss_dssp             HHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTEEEECTTCCSC
T ss_pred             HHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEecccccccccccccccc
Confidence            5566655457899999999999999888887765532  2334434443  11100000001110         000 0 


Q ss_pred             -ccC-------------CCCCccCccccCCeeeecHHHHHHHHHhCCCcCCCCcchHHHHHHH--hcCCCeEecCCCcee
Q 017533          286 -KFG-------------EEGNKYFRHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWF--IGLEVEHIDDRNMCC  349 (370)
Q Consensus       286 -~f~-------------y~~~~Yp~Y~~G~~YvlSrdla~~I~~~~~~l~~~~~EDV~lG~~l--~gL~v~~id~~~fc~  349 (370)
                       .|.             +.......|++|.+.++.+++++.+---.+  -.+..||+-++.=+  .|..+..+++..+.|
T Consensus       339 ~~f~~~~l~~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vGgfd~--~F~~~ED~Dl~lR~~~~G~ki~~~p~a~V~H  416 (657)
T 4fix_A          339 HDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQPLP--LFIKWDDADYGLRAAEHGYPTVTLPGAAIWH  416 (657)
T ss_dssp             EETTTSCSSCSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHCSCCS--CSSSSHHHHHHHHHHHTTCCEEEEEEEEEEE
T ss_pred             ccccccccccccccccccccceeccccchhHhHhhHHHHHHhCCChh--HhccCcHHHHHHHHHHcCCeEEEECCEEEEE
Confidence             000             011223457899999999999998743221  12347999999766  466666666655555

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*

Probab=90.11  E-value=9.3  Score=38.95  Aligned_cols=133  Identities=17%  Similarity=0.143  Sum_probs=73.7

Q ss_pred             HHHHHHHhcCCceEEEEecCceeecHHHHHHHHhhcCCCCc-eEEEEee---cCc--cc---ccC---------------
Q 017533          220 IFFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRHRSKPR-VYIGCMK---SGP--VL---SQK---------------  275 (370)
Q Consensus       220 ~~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~~L~~~~~~~~-lYiG~~~---~~p--v~---rd~---------------  275 (370)
                      ..+..+.+....+|++..|+|..+..+.|...+......+. ..+|...   ...  ..   ...               
T Consensus       164 ~a~N~g~~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (625)
T 2z86_A          164 AVRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQV  243 (625)
T ss_dssp             HHHHHHHHHCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC-------
T ss_pred             HHHHHHHHhCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCch
Confidence            34555666668999999999999998888887776543332 3333221   111  00   000               


Q ss_pred             --------CCccccCCcccc--CCCCCccCccccCCeeeecHHHHHHHHHhCCCcCCCCcchHHHHHHH--hcCCCeEec
Q 017533          276 --------NVKYHEPEYWKF--GEEGNKYFRHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWF--IGLEVEHID  343 (370)
Q Consensus       276 --------~~K~~~pe~w~f--~y~~~~Yp~Y~~G~~YvlSrdla~~I~~~~~~l~~~~~EDV~lG~~l--~gL~v~~id  343 (370)
                              ...|........  .........++.|++.+++++++..+---...+..+..||.-++.-+  .|..+.+++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p  323 (625)
T 2z86_A          244 AGKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVE  323 (625)
T ss_dssp             --------CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHHCCCCTTCSSCCCHHHHHHHHHHHTTCEEEECG
T ss_pred             hhhhccCCccccchhhhcccccccccCCceeEEeeceeeeEHHHHHHhCCCccccccCCcchhhhhhhHHhCCceEEEcc
Confidence                    000100000000  00001112357899999999999988432333334447999998655  566666666


Q ss_pred             CCCceeCCC
Q 017533          344 DRNMCCQTP  352 (370)
Q Consensus       344 ~~~fc~~~~  352 (370)
                      +...++..+
T Consensus       324 ~~~v~H~~~  332 (625)
T 2z86_A          324 GAMAYHQEP  332 (625)
T ss_dssp             GGCEEEECC
T ss_pred             cchhhccCC
Confidence            656655443

>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*

Probab=89.89  E-value=9.6  Score=33.42  Aligned_cols=164  Identities=7%  Similarity=-0.077  Sum_probs=88.2

Q ss_pred             ceEEEEEeecCCCCChhHHHHHHHHHhhCCCEEEecccccc-----ccchhHHHHHHHHHHhcCCceEEEEecCceeecH
Q 017533          171 GIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGY-----HELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNL  245 (370)
Q Consensus       171 ~i~v~FVvG~s~~~~~~~~~~I~~E~~~~~DIL~ld~~Dsy-----~nLt~Kt~~~~~wa~~~~~a~F~lKvDDDvfVnl  245 (370)
                      .+.++.|-..|.   +. ..++-++...+..+..+.....-     .|.  -.-..+..+.+....+|++..|+|.++..
T Consensus        30 ~~eiivvDd~S~---d~-t~~~~~~~~~~~~i~~i~~~~~~~~~~~~n~--G~~~a~N~gi~~a~g~~i~~lD~Dd~~~~  103 (255)
T 1qg8_A           30 DFELFIMDDNSN---EE-TLNVIRPFLNDNRVRFYQSDISGVKERTEKT--RYAALINQAIEMAEGEYITYATDDNIYMP  103 (255)
T ss_dssp             CEEEEEEECSCC---HH-HHHHHGGGGGSTTEEEEECCCCSHHHHHSSC--HHHHHHHHHHHHCCCSEEEEEETTEEECT
T ss_pred             ceEEEEEECCCC---ch-HHHHHHHHhhcCCEEEEeccccccccccccc--CHHHHHHHHHHHcCCCEEEEeCCCCccCh
Confidence            456666655443   22 23344454445555554432110     232  23445666777778999999999999998


Q ss_pred             HHHHHHHhhcCC--CCceEEEEeec---CcccccCCCccccCCccccCCCCCccCccccCCeeeecHHHHHHHHHhC---
Q 017533          246 GMLATTLSRHRS--KPRVYIGCMKS---GPVLSQKNVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISINQ---  317 (370)
Q Consensus       246 ~~L~~~L~~~~~--~~~lYiG~~~~---~pv~rd~~~K~~~pe~w~f~y~~~~Yp~Y~~G~~YvlSrdla~~I~~~~---  317 (370)
                      +.|...+.....  .-.+..|.+..   ... ...-..+..|.. .+.   .....+..|++.++.++++..+-...   
T Consensus       104 ~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~rr~~~~~~g~~f~~~  178 (255)
T 1qg8_A          104 DRLLKMVRELDTHPEKAVIYSASKTYHLNEN-RDIVKETVRPAA-QVT---WNAPCAIDHCSVMHRYSVLEKVKEKFGSY  178 (255)
T ss_dssp             THHHHHHHHHHHCTTCCEEEEEEEEEEEC----CEEEEEEECCC-SCB---SCCTTTSCGGGEEEETHHHHHHHHHHSSS
T ss_pred             HHHHHHHHHHHhCCCceEEEeceEEEEeCCC-CcchhhccCchH-HHH---HhhcCCCccceEEEEHHHHHhhccccccc
Confidence            888877766542  33444444321   100 000011112211 111   12334578999999999999986211   


Q ss_pred             --CCcCCCCcchHHHHHHHhcC-CCeEecCC
Q 017533          318 --PILHKFANEDVSLGSWFIGL-EVEHIDDR  345 (370)
Q Consensus       318 --~~l~~~~~EDV~lG~~l~gL-~v~~id~~  345 (370)
                        ........||..+..-+... .+.++++.
T Consensus       179 ~~~~~~~~~~eD~~~~~r~~~~g~~~~~~~~  209 (255)
T 1qg8_A          179 WDESPAFYRIGDARFFWRVNHFYPFYPLDEE  209 (255)
T ss_dssp             SCCCGGGSTTHHHHHHHHHTTTCCBEEEEEE
T ss_pred             ccCCcccchHHHHHHHHHHHHhCCEEEecCc
Confidence              01123468999887766322 45555543

>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}

Probab=84.61  E-value=27  Score=37.28  Aligned_cols=129  Identities=16%  Similarity=0.097  Sum_probs=72.4

Q ss_pred             HHHHHHhcCCceEEEEecCceeecHHHHHHHHhhcCCCCc--eEEEEee--c-CcccccCCCccccC-Ccccc-CC--C-
Q 017533          221 FFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRHRSKPR--VYIGCMK--S-GPVLSQKNVKYHEP-EYWKF-GE--E-  290 (370)
Q Consensus       221 ~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~~L~~~~~~~~--lYiG~~~--~-~pv~rd~~~K~~~p-e~w~f-~y--~-  290 (370)
                      .++.+.+..+.+|++.+|+|+.+..+.|...+......++  +..|...  . .+..+........+ +...| ..  . 
T Consensus       229 alN~gl~~a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (802)
T 4hg6_A          229 NMSAALERLKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRNLALGDRCPPENEMFYGKIHRG  308 (802)
T ss_dssp             HHHHHHHHCCCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCHHHHHHTCCTTSCCTTHHHHHTHHHH
T ss_pred             HHHHHHHhcCCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCchHhhhhhHHhhhhHHHHHHHHHHHhh
Confidence            4666777778999999999999999988888876632333  2222211  1 11100000000000 00000 00  0 


Q ss_pred             -CCccCccccCCeeeecHHHHHHHHHhCCCcCCCCcchHHHHHHHh--cCCCeEecCCCceeCCC
Q 017533          291 -GNKYFRHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWFI--GLEVEHIDDRNMCCQTP  352 (370)
Q Consensus       291 -~~~Yp~Y~~G~~YvlSrdla~~I~~~~~~l~~~~~EDV~lG~~l~--gL~v~~id~~~fc~~~~  352 (370)
                       ...-.+++.|++.++.+++++.+---.   .....||..++.-+.  |..+..+++.......|
T Consensus       309 ~~~~~~~~~~G~~~~~Rr~al~~vGgf~---~~~~~ED~~l~~rl~~~G~ri~~~~~~~~~~~~p  370 (802)
T 4hg6_A          309 LDRWGGAFFCGSAAVLRRRALDEAGGFA---GETITEDAETALEIHSRGWKSLYIDRAMIAGLQP  370 (802)
T ss_dssp             HHHTTCCCCCSSSEEEEHHHHHHHTTCC---CSSSSHHHHHHHHHHTTTCCEEECCCCCEEECCC
T ss_pred             HhhcCCceecccchhhhHHHHHHcCCcC---CCCcchHHHHHHHHHHcCCeEEEecCCEEEecCC
Confidence             000113467999999999999874211   122359999998774  56677777766655444

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	370
d1xhba2	328	Polypeptide N-acetylgalactosaminyltransferase 1, N	93.33

>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.33  E-value=0.61  Score=41.23  Aligned_cols=170  Identities=14%  Similarity=0.109  Sum_probs=87.1

Q ss_pred             EEEEEeecCCCCChhHHHHHHHHHhhCCCEEEe-ccccccccchhHHHHHHHHHHhcCCceEEEEecCceeecHHHHHHH
Q 017533          173 IIRFMIGHSATSNSILDKAIDSEDAQHKDFLRL-EHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLATT  251 (370)
Q Consensus       173 ~v~FVvG~s~~~~~~~~~~I~~E~~~~~DIL~l-d~~Dsy~nLt~Kt~~~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~~  251 (370)
                      .++.|-.-|.  ++.....+++-.+++.+-+.+ ...+   |.-  .-.+...+.+....+|++.+|+|+.+..+.|...
T Consensus        56 EIIvVDdgS~--d~~~~~~l~~~~~~~~~~i~vi~~~~---n~G--~~~a~N~Gi~~a~gd~i~flD~D~~~~p~~l~~l  128 (328)
T d1xhba2          56 EIVLVDDASE--RDFLKRPLESYVKKLKVPVHVIRMEQ---RSG--LIRARLKGAAVSRGQVITFLDAHCECTAGWLEPL  128 (328)
T ss_dssp             EEEEEECSCC--CGGGTHHHHHHHHSSSSCEEEEECSS---CCC--HHHHHHHHHHHCCSSEEEEEESSEEECTTCHHHH
T ss_pred             EEEEEECCCC--hhhHHHHHHHHHHhcCCCeEEEEecc---ccc--chHHHHHHHHhhhcceeeecCcccccChhHHHHH
Confidence            4544543332  344444444445555554333 3222   211  1235566676778999999999999998888777


Q ss_pred             HhhcCCCCceEE-EEee--cC---------ccccc-----CCCccc-cCC----ccccCCCCCccCccccCCeeeecHHH
Q 017533          252 LSRHRSKPRVYI-GCMK--SG---------PVLSQ-----KNVKYH-EPE----YWKFGEEGNKYFRHATGQIYAISKDL  309 (370)
Q Consensus       252 L~~~~~~~~lYi-G~~~--~~---------pv~rd-----~~~K~~-~pe----~w~f~y~~~~Yp~Y~~G~~YvlSrdl  309 (370)
                      +......+...+ |.+.  ..         +..+.     ....|+ .+.    ............+++.|+++++++++
T Consensus       129 ~~~~~~~~~~~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~  208 (328)
T d1xhba2         129 LARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDY  208 (328)
T ss_dssp             HHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHH
T ss_pred             HHHHhcCCCeEEecceeeeccCceeeccCCccccccccccccccccccchhhhhccccccccccccceecceeeeeeHHH
Confidence            665433332222 2221  11         00000     000111 010    00000111223356789999999999


Q ss_pred             HHHHHHhCCCcCCCCcchHHHHHHH--hcCCCeEecCCCcee
Q 017533          310 ATYISINQPILHKFANEDVSLGSWF--IGLEVEHIDDRNMCC  349 (370)
Q Consensus       310 a~~I~~~~~~l~~~~~EDV~lG~~l--~gL~v~~id~~~fc~  349 (370)
                      ...+----+.+..+..||+-++.-+  .|..+..+.+.++.|
T Consensus       209 f~~vGgfDe~~~~~g~ED~Dl~~R~~~~G~~i~~~p~~~v~H  250 (328)
T d1xhba2         209 FQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGH  250 (328)
T ss_dssp             HHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred             HHHhCCCCCCCcCcCchHHHHHHHHHHhCCeEEEeCCeEEEE
Confidence            9987543344444457887776544  566555555444443