Citrus Sinensis ID: 017551

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------37
Protein Sequence
MEENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWLGESEERVSWKHSKGHLLQQEMKRCQEKFHRLSFFSLESPSPVISKP
Secondary Structure (PSIPRED)
cccHHHHHHHcccccccccccEEEEEcccccccHHHHHHHHHcccccEEEEEEccccccHHHHcccccccccEEEEcccccHHHHHccccEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHHHHHccccccccEEEEccccccccccccccccccccccHHHHHHHHHHHccccHHHHHccccccccHHHHHHHHHHHHHHHHHHHcccccccEEEEEEcccccccEEEEEEEEcccccEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcccEEccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHccccccccEEEEEccccccHHHHHHHHHHcccccEEEEEEcccHHHHHHHHcccccccEEEEEEcHHHHHHHHccccEEEEccccccccccccHHHHHHHHHHHHHHHHHHHccccccEEEEccccHHHHHHHHHHHHHHccccccccEEEccHHHHHHHHHHHHHHccccHHHcEccEEEcccHHHEEEcHHHcEccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccEEEEEEEcccccccEEEEEEEEEccEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEcccccccccccc
Coil and Loop (DISEMBL)
meensclrQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYdvvntpgvtadishmdtgavvrgflgqpqlenaltgmdlviipagvprkpgmtrddlfnINAGIVRTLCEGIakccpnatvnlisnpvnstvPIAAEVFkkagtydpkkllGVTMLDVVRANTFVAEVlgldprdvdvpvvgghagvtilpllsqvkppcsftqEETEYLTNRIQNGGTEVVeakagagsaTLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEifqlgplneyesGLFCLLHLCFQDWLGESEERVSWKHSKGHLLQQEMKRCQEKfhrlsffslespspviskp
Flexible Loop (DISEMBL)
MEENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEvlgldprdvdvpVVGGHAGVTilpllsqvkpPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWLGESEERVSWKHSKGHLLQQEMKRCQEKFHRlsffslespspviskp
Low Complexity Region (SEG)
MEENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEvlgldprdvdvpvvggHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWLGESEERVSWKHSKGHLLQQEMKRCQEKFHRLSFFSLESPSPVISKP
Disordered region (IsUnstruct)
**********KCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWLGESEERVSWKHSKGHLL******C**KFHRLSFF************
Disordered Region (DISOPRED)
**********************VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWLGESEERVSWKH****************FHRLSFFSLESPSP*****
Disordered Region (DISEMBL)
*****************AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWLGESEERVSWKHSKGHLLQQEMKRCQEKFHRLSFFSLE*********
Disordered Region (DISPRO)
*****************AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWLGESEERVSWKHSKGHLLQQEMKRCQEKFHRLSFFSLESP*******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWLGESEERVSWKHSKGHLLQQEMKRCQEKFHRLSFFSLESPSPVISKP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	369	2.2.26 [Sep-21-2011]
P19446	356	Malate dehydrogenase, gly	N/A	no	0.899	0.932	0.856	1e-164
P46488	356	Malate dehydrogenase, gly	N/A	no	0.891	0.924	0.858	1e-163
Q42972	356	Malate dehydrogenase, gly	yes	no	0.834	0.865	0.899	1e-161
P37228	353	Malate dehydrogenase, gly	yes	no	0.831	0.869	0.869	1e-157
O82399	354	Probable malate dehydroge	yes	no	0.834	0.870	0.866	1e-155
Q9ZP05	354	Malate dehydrogenase, gly	no	no	0.829	0.864	0.872	1e-149
Q9XFW3	358	Malate dehydrogenase 2, g	N/A	no	0.829	0.854	0.872	1e-149
Q43743	358	Malate dehydrogenase 1, g	N/A	no	0.829	0.854	0.875	1e-149
Q9ZP06	341	Malate dehydrogenase 1, m	no	no	0.834	0.903	0.639	1e-110
P17783	347	Malate dehydrogenase, mit	N/A	no	0.777	0.827	0.682	1e-110

>sp|P19446|MDHG_CITLA Malate dehydrogenase, glyoxysomal OS=Citrullus lanatus PE=1 SV=1

 Score =  578 bits (1489), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 287/335 (85%), Positives = 303/335 (90%), Gaps = 3/335 (0%)

Query: 1   MEENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV 60
           MEE+S LR+A CRAKGGA GFKVAILGAAGGIGQPLAMLMK+NPLVSVLHLYDVVN PGV
Sbjct: 25  MEESSALRRANCRAKGGAPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGV 84

Query: 61  TADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTL 120
           TADISHMDTGAVVRGFLGQ QLE ALTGMDL+I+PAGVPRKPGMTRDDLF INAGIV+TL
Sbjct: 85  TADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTL 144

Query: 121 CEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEV 180
           CEGIAKCCP A VNLISNPVNSTVPIAAEVFKKAGTYDPK+LLGVTMLDVVRANTFVAEV
Sbjct: 145 CEGIAKCCPRAIVNLISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTMLDVVRANTFVAEV 204

Query: 181 LGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGA 240
           LGLDPRDVDVPVVGGHAGVTILPLLSQVKPP SFTQEE  YLT+RIQNGGTEVVEAKAGA
Sbjct: 205 LGLDPRDVDVPVVGGHAGVTILPLLSQVKPPSSFTQEEISYLTDRIQNGGTEVVEAKAGA 264

Query: 241 GSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQ 300
           GSATLSMAYAAVKFADACLRGLRGDAGV+ECAFV+SQVTELPFFASKVRLGR G EE++ 
Sbjct: 265 GSATLSMAYAAVKFADACLRGLRGDAGVIECAFVSSQVTELPFFASKVRLGRNGIEEVYS 324

Query: 301 LGPLNEYESGLFCLLHLCFQDWLGESEERVSWKHS 335
           LGPLNEYE      L    ++  G  E+ VS+  S
Sbjct: 325 LGPLNEYER---IGLEKAKKELAGSIEKGVSFIRS 356

Citrullus lanatus (taxid: 3654)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 3EC: 7

>sp|P46488|MDHG_CUCSA Malate dehydrogenase, glyoxysomal OS=Cucumis sativus GN=MDHG PE=2 SV=1

 Score =  573 bits (1477), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 285/332 (85%), Positives = 302/332 (90%), Gaps = 3/332 (0%)

Query: 1   MEENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV 60
           MEE+S LR+A CRAKGGA GFKVAILGAAGGIGQPLAMLMK+NPLVSVLHLYDVVN PGV
Sbjct: 25  MEESSVLRRANCRAKGGAPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGV 84

Query: 61  TADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTL 120
           TADISHMDTGAVVRGFLGQ QLE ALTGMDLV+IPAGVPRKPGMTRDDLF INAGIV+TL
Sbjct: 85  TADISHMDTGAVVRGFLGQQQLERALTGMDLVVIPAGVPRKPGMTRDDLFKINAGIVKTL 144

Query: 121 CEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEV 180
           CEGIAKCCP A VNLISNPVNSTVPIAAEVFKKAGTYDPK+LLGVTMLDVVRANTFVAEV
Sbjct: 145 CEGIAKCCPTAIVNLISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTMLDVVRANTFVAEV 204

Query: 181 LGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGA 240
           LGLDPRDV+VPVVGGHAGVTILPLLSQVKPP SFTQEE  YLT+RIQNGGTEVVEAKAGA
Sbjct: 205 LGLDPRDVNVPVVGGHAGVTILPLLSQVKPPSSFTQEEINYLTDRIQNGGTEVVEAKAGA 264

Query: 241 GSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQ 300
           GSATLSMAYAAVKFADACLRGLRGDAGVVECAFV+SQVTELPFFA+KVRLGR G +E++ 
Sbjct: 265 GSATLSMAYAAVKFADACLRGLRGDAGVVECAFVSSQVTELPFFATKVRLGRNGIDEVYS 324

Query: 301 LGPLNEYESGLFCLLHLCFQDWLGESEERVSW 332
           LGPLNEYE      L    ++  G  E+ VS+
Sbjct: 325 LGPLNEYER---IGLEKAKKELAGSIEKGVSF 353

Cucumis sativus (taxid: 3659)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

>sp|Q42972|MDHG_ORYSJ Malate dehydrogenase, glyoxysomal OS=Oryza sativa subsp. japonica GN=Os12g0632700 PE=1 SV=3

 Score =  567 bits (1461), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 277/308 (89%), Positives = 290/308 (94%)

Query: 1   MEENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV 60
           MEE+  LR + CRAKG A GFKVAILGA+GGIGQPLA+LMK+NPLVSVLHLYDVVNTPGV
Sbjct: 25  MEESPLLRGSNCRAKGAAPGFKVAILGASGGIGQPLALLMKMNPLVSVLHLYDVVNTPGV 84

Query: 61  TADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTL 120
           TADISHM+TGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTL
Sbjct: 85  TADISHMNTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTL 144

Query: 121 CEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEV 180
           CEGIAKCCPNA VN+ISNPVNSTVPIAAEVFKKAGTYDPK+LLGVT LDVVRANTFVAEV
Sbjct: 145 CEGIAKCCPNAIVNVISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTTLDVVRANTFVAEV 204

Query: 181 LGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGA 240
           LGLDPRDV+VPV+GGHAGVTILPLLSQV PPCSFT EE  YLT RIQNGGTEVVEAKAGA
Sbjct: 205 LGLDPRDVNVPVIGGHAGVTILPLLSQVNPPCSFTSEEISYLTTRIQNGGTEVVEAKAGA 264

Query: 241 GSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQ 300
           GSATLSMAYAA KFADACLRGLRGDAG+VEC+FVASQVTELPFFASKVRLGR G EEI  
Sbjct: 265 GSATLSMAYAASKFADACLRGLRGDAGIVECSFVASQVTELPFFASKVRLGRCGIEEILS 324

Query: 301 LGPLNEYE 308
           LGPLNE+E
Sbjct: 325 LGPLNEFE 332

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

>sp|P37228|MDHG_SOYBN Malate dehydrogenase, glyoxysomal OS=Glycine max PE=2 SV=2

 Score =  556 bits (1432), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 267/307 (86%), Positives = 289/307 (94%)

Query: 2   EENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVT 61
           E++ CL+++ CRAKGG +GFKVAILGAAGGIGQPLAMLMK+NPLVS+LHLYDVVNTPGVT
Sbjct: 23  EDDVCLKRSDCRAKGGVSGFKVAILGAAGGIGQPLAMLMKMNPLVSLLHLYDVVNTPGVT 82

Query: 62  ADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLC 121
           +DISHMDTGAVVRGFLGQ QLE+AL GMDLVIIPAGVPRKPGMTRDDLFNINAGIV+TLC
Sbjct: 83  SDISHMDTGAVVRGFLGQQQLEDALIGMDLVIIPAGVPRKPGMTRDDLFNINAGIVKTLC 142

Query: 122 EGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVL 181
           E IAKCCP A VN+ISNPVNSTVPIAAEVFK+AGTYDPK+LLGVTMLDVVRANTFVAEVL
Sbjct: 143 EAIAKCCPKAIVNVISNPVNSTVPIAAEVFKRAGTYDPKRLLGVTMLDVVRANTFVAEVL 202

Query: 182 GLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAG 241
           G+DPRDVDVPVVGGHAG+TILPLLSQ+KPPCSFT +E EYLT RIQNGG EVVEAKAGAG
Sbjct: 203 GVDPRDVDVPVVGGHAGITILPLLSQIKPPCSFTPKEIEYLTGRIQNGGPEVVEAKAGAG 262

Query: 242 SATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQL 301
           SATLSMAYAAVKFADACL  LRGDAG++ECA+VASQVTELPFFASKVRLGR G EEI  L
Sbjct: 263 SATLSMAYAAVKFADACLHALRGDAGIIECAYVASQVTELPFFASKVRLGRVGVEEILPL 322

Query: 302 GPLNEYE 308
           GPLN+YE
Sbjct: 323 GPLNDYE 329

Glycine max (taxid: 3847)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

>sp|O82399|MDHG2_ARATH Probable malate dehydrogenase, glyoxysomal OS=Arabidopsis thaliana GN=At2g22780 PE=1 SV=1

 Score =  549 bits (1414), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 267/308 (86%), Positives = 286/308 (92%)

Query: 1   MEENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV 60
           + + S L +  CRAKGG+ GFKVAILGAAGGIGQPLAMLMK+NPLVSVLHLYDV N PGV
Sbjct: 23  IADGSGLNRVACRAKGGSPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVANAPGV 82

Query: 61  TADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTL 120
           TADISHMDT AVVRGFLGQPQLE ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTL
Sbjct: 83  TADISHMDTSAVVRGFLGQPQLEEALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTL 142

Query: 121 CEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEV 180
            E IAKCCP A VN+ISNPVNSTVPIAAEVFKKAGT+DPKKL+GVTMLDVVRANTFVAEV
Sbjct: 143 SEAIAKCCPKAIVNIISNPVNSTVPIAAEVFKKAGTFDPKKLMGVTMLDVVRANTFVAEV 202

Query: 181 LGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGA 240
           + LDPR+V+VPVVGGHAGVTILPLLSQVKPPCSFTQ+E EYLT+RIQNGGTEVVEAKAGA
Sbjct: 203 MSLDPREVEVPVVGGHAGVTILPLLSQVKPPCSFTQKEIEYLTDRIQNGGTEVVEAKAGA 262

Query: 241 GSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQ 300
           GSATLSMAYAAV+FADACLRGLRGDA +VECA+VAS VTELPFFASKVRLGR G +E++ 
Sbjct: 263 GSATLSMAYAAVEFADACLRGLRGDANIVECAYVASHVTELPFFASKVRLGRCGIDEVYG 322

Query: 301 LGPLNEYE 308
           LGPLNEYE
Sbjct: 323 LGPLNEYE 330

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

>sp|Q9ZP05|MDHG1_ARATH Malate dehydrogenase, glyoxysomal OS=Arabidopsis thaliana GN=At5g09660 PE=1 SV=1

 Score =  529 bits (1362), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 267/306 (87%), Positives = 285/306 (93%)

Query: 3   ENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA 62
           +NS + +  CRAKGG  GFKVAILGAAGGIGQ L++LMK+NPLVS+LHLYDVVN PGVTA
Sbjct: 25  KNSVIGRENCRAKGGNPGFKVAILGAAGGIGQSLSLLMKMNPLVSLLHLYDVVNAPGVTA 84

Query: 63  DISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCE 122
           D+SHMDTGAVVRGFLG  QLE+ALTGMDLVIIPAG+PRKPGMTRDDLF INAGIV+TLCE
Sbjct: 85  DVSHMDTGAVVRGFLGAKQLEDALTGMDLVIIPAGIPRKPGMTRDDLFKINAGIVKTLCE 144

Query: 123 GIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLG 182
           G+AKCCPNA VNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT LDV RANTFVAEVLG
Sbjct: 145 GVAKCCPNAIVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTTLDVARANTFVAEVLG 204

Query: 183 LDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGS 242
           LDPR+VDVPVVGGHAGVTILPLLSQVKPP SFT +E EYLTNRIQNGGTEVVEAKAGAGS
Sbjct: 205 LDPREVDVPVVGGHAGVTILPLLSQVKPPSSFTPQEIEYLTNRIQNGGTEVVEAKAGAGS 264

Query: 243 ATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLG 302
           ATLSMAYAA KFADACLRGLRGDA VVEC+FVASQVTEL FFA+KVRLGR GAEE++QLG
Sbjct: 265 ATLSMAYAAAKFADACLRGLRGDANVVECSFVASQVTELAFFATKVRLGRTGAEEVYQLG 324

Query: 303 PLNEYE 308
           PLNEYE
Sbjct: 325 PLNEYE 330

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

>sp|Q9XFW3|MDHG2_BRANA Malate dehydrogenase 2, glyoxysomal OS=Brassica napus GN=MDH2 PE=3 SV=1

 Score =  526 bits (1356), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 267/306 (87%), Positives = 283/306 (92%)

Query: 3   ENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA 62
           +NS + +  CRAKGG  GFKVAILGAAGGIGQ L++LMK+NPLVS+LHLYDVVN PGVTA
Sbjct: 29  KNSVMGRENCRAKGGNPGFKVAILGAAGGIGQSLSLLMKMNPLVSLLHLYDVVNAPGVTA 88

Query: 63  DISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCE 122
           D+SHMDTGAVVRGFLG  QLE+ALTGMDLVIIPAGVPRKPGMTRDDLF INAGIV+TLCE
Sbjct: 89  DVSHMDTGAVVRGFLGAKQLEDALTGMDLVIIPAGVPRKPGMTRDDLFKINAGIVKTLCE 148

Query: 123 GIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLG 182
           G+AKCCPNA VNLISNPVNSTV IAAEVFKKAGTYDPKKLLGVT LDV RANTFVAEVLG
Sbjct: 149 GVAKCCPNAIVNLISNPVNSTVAIAAEVFKKAGTYDPKKLLGVTTLDVARANTFVAEVLG 208

Query: 183 LDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGS 242
           LDPR+VDVPVVGGHAGVTILPLLSQVKPP SFT  E EYLTNRIQNGGTEVVEAKAGAGS
Sbjct: 209 LDPREVDVPVVGGHAGVTILPLLSQVKPPSSFTPSEIEYLTNRIQNGGTEVVEAKAGAGS 268

Query: 243 ATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLG 302
           ATLSMAYAA KFADACLRGLRGDA V+EC+FVASQVTEL FFA+KVRLGR GAEE+FQLG
Sbjct: 269 ATLSMAYAAAKFADACLRGLRGDANVIECSFVASQVTELAFFATKVRLGRTGAEEVFQLG 328

Query: 303 PLNEYE 308
           PLNEYE
Sbjct: 329 PLNEYE 334

Brassica napus (taxid: 3708)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

>sp|Q43743|MDHG1_BRANA Malate dehydrogenase 1, glyoxysomal OS=Brassica napus GN=MDH1 PE=2 SV=2

 Score =  526 bits (1355), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 268/306 (87%), Positives = 282/306 (92%)

Query: 3   ENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA 62
           +NS +    CRAKGG  GFKVAILGAAGGIGQ L++LMK+NPLVS+LHLYDVVN PGVTA
Sbjct: 29  KNSVMGLESCRAKGGNPGFKVAILGAAGGIGQSLSLLMKMNPLVSLLHLYDVVNAPGVTA 88

Query: 63  DISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCE 122
           D+SHMDTGAVVRGFLG  QLE+ALTGMDLVIIPAGVPRKPGMTRDDLF INAGIVRTLCE
Sbjct: 89  DVSHMDTGAVVRGFLGAKQLEDALTGMDLVIIPAGVPRKPGMTRDDLFKINAGIVRTLCE 148

Query: 123 GIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLG 182
           G+AKCCPNA VNLISNPVNSTV IAAEVFKKAGTYDPKKLLGVT LDV RANTFVAEVLG
Sbjct: 149 GVAKCCPNAIVNLISNPVNSTVAIAAEVFKKAGTYDPKKLLGVTTLDVARANTFVAEVLG 208

Query: 183 LDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGS 242
           LDPR+VDVPVVGGHAGVTILPLLSQVKPP SFT  E EYLTNRIQNGGTEVVEAKAGAGS
Sbjct: 209 LDPREVDVPVVGGHAGVTILPLLSQVKPPSSFTPSEIEYLTNRIQNGGTEVVEAKAGAGS 268

Query: 243 ATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLG 302
           ATLSMAYAA KFADACLRGLRGDA V+EC+FVASQVTEL FFA+KVRLGR GAEE+FQLG
Sbjct: 269 ATLSMAYAAAKFADACLRGLRGDANVIECSFVASQVTELAFFATKVRLGRTGAEEVFQLG 328

Query: 303 PLNEYE 308
           PLNEYE
Sbjct: 329 PLNEYE 334

Brassica napus (taxid: 3708)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

>sp|Q9ZP06|MDHM1_ARATH Malate dehydrogenase 1, mitochondrial OS=Arabidopsis thaliana GN=At1g53240 PE=1 SV=1

 Score =  400 bits (1027), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 199/311 (63%), Positives = 236/311 (75%), Gaps = 3/311 (0%)

Query: 1   MEENSCLRQAKCR---AKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT 57
           +  ++  +QA  R   + G     KVAILGAAGGIGQPLA+LMK+NPLVS L LYD+ NT
Sbjct: 7   VRSSASAKQAVIRRSFSSGSVPERKVAILGAAGGIGQPLALLMKLNPLVSSLSLYDIANT 66

Query: 58  PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIV 117
           PGV AD+ H++T + V G++G   L  AL G DLVIIPAGVPRKPGMTRDDLFNINAGIV
Sbjct: 67  PGVAADVGHINTRSEVVGYMGDDNLAKALEGADLVIIPAGVPRKPGMTRDDLFNINAGIV 126

Query: 118 RTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFV 177
           + LC  IAK CP+A +N+ISNPVNSTVPIAAE+FKKAG YD KKL GVT LDVVRA TF 
Sbjct: 127 KNLCTAIAKYCPHALINMISNPVNSTVPIAAEIFKKAGMYDEKKLFGVTTLDVVRARTFY 186

Query: 178 AEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAK 237
           A    +   +V+VPV+GGHAGVTILPL SQ  P  + + +    LT R Q+GGTEVVEAK
Sbjct: 187 AGKANVPVAEVNVPVIGGHAGVTILPLFSQATPQANLSSDILTALTKRTQDGGTEVVEAK 246

Query: 238 AGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEE 297
           AG GSATLSMAYA   FADACL+GL G   V+EC++V S +TELPFFASKVRLG+ G EE
Sbjct: 247 AGKGSATLSMAYAGALFADACLKGLNGVPDVIECSYVQSTITELPFFASKVRLGKNGVEE 306

Query: 298 IFQLGPLNEYE 308
           +  LGPL+++E
Sbjct: 307 VLDLGPLSDFE 317

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

>sp|P17783|MDHM_CITLA Malate dehydrogenase, mitochondrial OS=Citrullus lanatus GN=MMDH PE=1 SV=1

 Score =  400 bits (1027), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 196/287 (68%), Positives = 229/287 (79%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 81
           KVA+LGAAGGIGQPLA+LMK+NPLVS L LYD+  TPGV AD+ H++T + V G++G+ Q
Sbjct: 36  KVAVLGAAGGIGQPLALLMKLNPLVSKLALYDIAGTPGVAADVGHVNTRSEVTGYVGEEQ 95

Query: 82  LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 141
           L  AL G D+VIIPAGVPRKPGMTRDDLFNINAGIV++LC  IAK CPNA +N+ISNPVN
Sbjct: 96  LGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIAKYCPNALINMISNPVN 155

Query: 142 STVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTI 201
           STVPIAAEVFKKAGTYD KKL GVT LDVVRA TF A    +   +V+VPV+GGHAG+TI
Sbjct: 156 STVPIAAEVFKKAGTYDEKKLFGVTTLDVVRAKTFYAGKANVPVAEVNVPVIGGHAGITI 215

Query: 202 LPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRG 261
           LPL SQ  P  + + +    LT R Q+GGTEVVEAKAG GSATLSMAYA   FADACL+G
Sbjct: 216 LPLFSQATPRANLSDDTIVALTKRTQDGGTEVVEAKAGKGSATLSMAYAGALFADACLKG 275

Query: 262 LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYE 308
           L G   VVEC+FV S VTELPFFASKV+LG+ G E +  LGPL+++E
Sbjct: 276 LNGVPDVVECSFVQSTVTELPFFASKVKLGKNGVESVLDLGPLSDFE 322

Citrullus lanatus (taxid: 3654)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	369
359475502	356	PREDICTED: malate dehydrogenase, glyoxys	0.834	0.865	0.941	1e-167
255562058	356	malate dehydrogenase, putative [Ricinus	0.834	0.865	0.918	1e-164
118489009	354	unknown [Populus trichocarpa x Populus d	0.834	0.870	0.915	1e-163
60593475	362	Chain A, Mature And Translocatable Forms	0.899	0.917	0.856	1e-162
126894	356	RecName: Full=Malate dehydrogenase, glyo	0.899	0.932	0.856	1e-162
224103817	354	predicted protein [Populus trichocarpa]	0.834	0.870	0.909	1e-162
224056321	356	predicted protein [Populus trichocarpa]	0.831	0.862	0.915	1e-161
1170897	356	RecName: Full=Malate dehydrogenase, glyo	0.891	0.924	0.858	1e-161
449451347	356	PREDICTED: malate dehydrogenase, glyoxys	0.891	0.924	0.858	1e-161
158712040	354	malate dehydrogenase [Perilla frutescens	0.831	0.867	0.912	1e-161

>gi|359475502|ref|XP_003631692.1| PREDICTED: malate dehydrogenase, glyoxysomal [Vitis vinifera] gi|147774268|emb|CAN65552.1| hypothetical protein VITISV_033330 [Vitis vinifera] gi|297736349|emb|CBI25072.3| unnamed protein product [Vitis vinifera]

 Score =  595 bits (1534), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 290/308 (94%), Positives = 300/308 (97%)

Query: 1   MEENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV 60
           MEE+S LR+A CRAKGGA GFKVAILGAAGGIGQPLAMLMK+NPLVSVLHLYDVVN PGV
Sbjct: 25  MEESSVLRRANCRAKGGAPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGV 84

Query: 61  TADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTL 120
           TADISHMDTGAVVRGFLGQPQLE+ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTL
Sbjct: 85  TADISHMDTGAVVRGFLGQPQLESALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTL 144

Query: 121 CEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEV 180
           CEGIAKCCPNA VNLISNPVNSTVPIAAEVFKKAGTYDPK+LLGVTMLDVVRANTFVAEV
Sbjct: 145 CEGIAKCCPNAIVNLISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTMLDVVRANTFVAEV 204

Query: 181 LGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGA 240
           LGLDPR+VDVPVVGGH+GVTILPLLSQVKPPCSFT EET+YLTNRIQNGGTEVVEAKAGA
Sbjct: 205 LGLDPREVDVPVVGGHSGVTILPLLSQVKPPCSFTPEETQYLTNRIQNGGTEVVEAKAGA 264

Query: 241 GSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQ 300
           GSATLSMAYAAVKFADACLRGLRGDAGVVEC FVASQVTELPFFA+KVRLGR GAEEI+Q
Sbjct: 265 GSATLSMAYAAVKFADACLRGLRGDAGVVECTFVASQVTELPFFATKVRLGRSGAEEIYQ 324

Query: 301 LGPLNEYE 308
           LGPLNEYE
Sbjct: 325 LGPLNEYE 332

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255562058|ref|XP_002522037.1| malate dehydrogenase, putative [Ricinus communis] gi|223538636|gb|EEF40237.1| malate dehydrogenase, putative [Ricinus communis]

 Score =  585 bits (1509), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 283/308 (91%), Positives = 298/308 (96%)

Query: 1   MEENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV 60
           ME +S L++A CRAKGG+ GFKVAILGAAGGIGQPLAMLMK+NPLVSVLHLYDVVN PGV
Sbjct: 25  MEGSSALKRADCRAKGGSPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGV 84

Query: 61  TADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTL 120
           TADISHMDTGAVVRGFLGQPQLENALTGMDLV+IPAGVPRKPGMTRDDLFNINAGIVRTL
Sbjct: 85  TADISHMDTGAVVRGFLGQPQLENALTGMDLVVIPAGVPRKPGMTRDDLFNINAGIVRTL 144

Query: 121 CEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEV 180
           CEGIAKCCP A VNLISNPVNSTVPIAAEVFKKAGTYDPK+LLGVTMLDVVRANTFVAEV
Sbjct: 145 CEGIAKCCPRAIVNLISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTMLDVVRANTFVAEV 204

Query: 181 LGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGA 240
           LGLDPR+VDVPVVGGHAGVTILPLLSQVKPPCSFT EETEYLT RIQ+GGTEVV+AKAGA
Sbjct: 205 LGLDPREVDVPVVGGHAGVTILPLLSQVKPPCSFTSEETEYLTKRIQDGGTEVVQAKAGA 264

Query: 241 GSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQ 300
           GSATLSMAYAAVKFADACLRGLRGDAG+VEC+FVASQVTELPFFA+KVRLGR GAEE++Q
Sbjct: 265 GSATLSMAYAAVKFADACLRGLRGDAGIVECSFVASQVTELPFFATKVRLGRNGAEEVYQ 324

Query: 301 LGPLNEYE 308
           LGPLNEYE
Sbjct: 325 LGPLNEYE 332

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118489009|gb|ABK96312.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  580 bits (1494), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 282/308 (91%), Positives = 296/308 (96%)

Query: 1   MEENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV 60
           MEE+  L++  CRAKGGA GFKVAILGAAGGIGQPLAMLMK+NPLVSVLHLYDVVN PGV
Sbjct: 23  MEESCVLKRTDCRAKGGAPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGV 82

Query: 61  TADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTL 120
           TADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLF INAGIVRTL
Sbjct: 83  TADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFKINAGIVRTL 142

Query: 121 CEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEV 180
           CEG+AKCCPNA VNLISNPVNSTVPIAAEVFKKAGTYDPK+LLGVTMLDVVRANTFVAEV
Sbjct: 143 CEGVAKCCPNAIVNLISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTMLDVVRANTFVAEV 202

Query: 181 LGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGA 240
           LGLDPR+VDVPVVGGHAGVTILPLLSQ KPP SFT EETEYLT RIQ+GGTEVV+AKAGA
Sbjct: 203 LGLDPREVDVPVVGGHAGVTILPLLSQAKPPSSFTPEETEYLTKRIQDGGTEVVQAKAGA 262

Query: 241 GSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQ 300
           GSATLSMAYAAVKFADACLRGLRGDAGVVECAFVAS+VTELPFFA+KVRLGR+GAEE++Q
Sbjct: 263 GSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASEVTELPFFATKVRLGRRGAEEVYQ 322

Query: 301 LGPLNEYE 308
           LGPLNEYE
Sbjct: 323 LGPLNEYE 330

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|60593475|pdb|1SEV|A Chain A, Mature And Translocatable Forms Of Glyoxysomal Malate Dehydrogenase Have Different Activities And Stabilities But Similar Crystal Structures gi|60593476|pdb|1SEV|B Chain B, Mature And Translocatable Forms Of Glyoxysomal Malate Dehydrogenase Have Different Activities And Stabilities But Similar Crystal Structures

 Score =  578 bits (1489), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 287/335 (85%), Positives = 303/335 (90%), Gaps = 3/335 (0%)

Query: 1   MEENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV 60
           MEE+S LR+A CRAKGGA GFKVAILGAAGGIGQPLAMLMK+NPLVSVLHLYDVVN PGV
Sbjct: 25  MEESSALRRANCRAKGGAPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGV 84

Query: 61  TADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTL 120
           TADISHMDTGAVVRGFLGQ QLE ALTGMDL+I+PAGVPRKPGMTRDDLF INAGIV+TL
Sbjct: 85  TADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTL 144

Query: 121 CEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEV 180
           CEGIAKCCP A VNLISNPVNSTVPIAAEVFKKAGTYDPK+LLGVTMLDVVRANTFVAEV
Sbjct: 145 CEGIAKCCPRAIVNLISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTMLDVVRANTFVAEV 204

Query: 181 LGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGA 240
           LGLDPRDVDVPVVGGHAGVTILPLLSQVKPP SFTQEE  YLT+RIQNGGTEVVEAKAGA
Sbjct: 205 LGLDPRDVDVPVVGGHAGVTILPLLSQVKPPSSFTQEEISYLTDRIQNGGTEVVEAKAGA 264

Query: 241 GSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQ 300
           GSATLSMAYAAVKFADACLRGLRGDAGV+ECAFV+SQVTELPFFASKVRLGR G EE++ 
Sbjct: 265 GSATLSMAYAAVKFADACLRGLRGDAGVIECAFVSSQVTELPFFASKVRLGRNGIEEVYS 324

Query: 301 LGPLNEYESGLFCLLHLCFQDWLGESEERVSWKHS 335
           LGPLNEYE      L    ++  G  E+ VS+  S
Sbjct: 325 LGPLNEYER---IGLEKAKKELAGSIEKGVSFIRS 356

Source: Citrullus lanatus

Species: Citrullus lanatus

Genus: Citrullus

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|126894|sp|P19446.1|MDHG_CITLA RecName: Full=Malate dehydrogenase, glyoxysomal; Flags: Precursor gi|167284|gb|AAA33041.1| glyoxysomal malate dehydrogenase precursor (EC 1.1.1.37) [Citrullus lanatus subsp. vulgaris]

 Score =  578 bits (1489), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 287/335 (85%), Positives = 303/335 (90%), Gaps = 3/335 (0%)

Query: 1   MEENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV 60
           MEE+S LR+A CRAKGGA GFKVAILGAAGGIGQPLAMLMK+NPLVSVLHLYDVVN PGV
Sbjct: 25  MEESSALRRANCRAKGGAPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGV 84

Query: 61  TADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTL 120
           TADISHMDTGAVVRGFLGQ QLE ALTGMDL+I+PAGVPRKPGMTRDDLF INAGIV+TL
Sbjct: 85  TADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTL 144

Query: 121 CEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEV 180
           CEGIAKCCP A VNLISNPVNSTVPIAAEVFKKAGTYDPK+LLGVTMLDVVRANTFVAEV
Sbjct: 145 CEGIAKCCPRAIVNLISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTMLDVVRANTFVAEV 204

Query: 181 LGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGA 240
           LGLDPRDVDVPVVGGHAGVTILPLLSQVKPP SFTQEE  YLT+RIQNGGTEVVEAKAGA
Sbjct: 205 LGLDPRDVDVPVVGGHAGVTILPLLSQVKPPSSFTQEEISYLTDRIQNGGTEVVEAKAGA 264

Query: 241 GSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQ 300
           GSATLSMAYAAVKFADACLRGLRGDAGV+ECAFV+SQVTELPFFASKVRLGR G EE++ 
Sbjct: 265 GSATLSMAYAAVKFADACLRGLRGDAGVIECAFVSSQVTELPFFASKVRLGRNGIEEVYS 324

Query: 301 LGPLNEYESGLFCLLHLCFQDWLGESEERVSWKHS 335
           LGPLNEYE      L    ++  G  E+ VS+  S
Sbjct: 325 LGPLNEYER---IGLEKAKKELAGSIEKGVSFIRS 356

Source: Citrullus lanatus subsp. vulgaris

Species: Citrullus lanatus

Genus: Citrullus

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224103817|ref|XP_002313205.1| predicted protein [Populus trichocarpa] gi|118487242|gb|ABK95449.1| unknown [Populus trichocarpa] gi|222849613|gb|EEE87160.1| predicted protein [Populus trichocarpa]

 Score =  578 bits (1489), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 280/308 (90%), Positives = 296/308 (96%)

Query: 1   MEENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV 60
           MEE+  L++  CRAKGGA GFKVAILGAAGGIGQPLAMLMK+NPLVSVLHLYDVVN PGV
Sbjct: 23  MEESCVLKRTDCRAKGGAPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGV 82

Query: 61  TADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTL 120
           TADISHMDTGAVVRGFLGQPQLE+ALTGMDLVIIPAGVPRKPGMTRDDLF INAGIVRTL
Sbjct: 83  TADISHMDTGAVVRGFLGQPQLESALTGMDLVIIPAGVPRKPGMTRDDLFKINAGIVRTL 142

Query: 121 CEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEV 180
           CEG+AKCCPNA VNLISNPVNSTVPIAAEVFKKAGTYDPK+LLGVTMLDVVRANTFVAEV
Sbjct: 143 CEGVAKCCPNAIVNLISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTMLDVVRANTFVAEV 202

Query: 181 LGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGA 240
           LGLDPR+VDVPVVGGHAGVTILPLLSQ KPP SFT EETEYLT RIQ+GGTEVV+AKAGA
Sbjct: 203 LGLDPREVDVPVVGGHAGVTILPLLSQAKPPSSFTPEETEYLTKRIQDGGTEVVQAKAGA 262

Query: 241 GSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQ 300
           GSATLSMAYAAVKFADACLRGLRGDAGVVECAF+AS+VTELPFFA+KVRLGR+GAEE++Q
Sbjct: 263 GSATLSMAYAAVKFADACLRGLRGDAGVVECAFIASEVTELPFFATKVRLGRRGAEEVYQ 322

Query: 301 LGPLNEYE 308
           LGPLNEYE
Sbjct: 323 LGPLNEYE 330

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224056321|ref|XP_002298801.1| predicted protein [Populus trichocarpa] gi|222846059|gb|EEE83606.1| predicted protein [Populus trichocarpa]

 Score =  573 bits (1478), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 281/307 (91%), Positives = 295/307 (96%)

Query: 2   EENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVT 61
           EE+  L++A CRAKGGA GFKVAILGAAGGIGQPLAMLMK+NP VSVLHLYDVVNTPGVT
Sbjct: 26  EESCVLKRADCRAKGGAPGFKVAILGAAGGIGQPLAMLMKMNPSVSVLHLYDVVNTPGVT 85

Query: 62  ADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLC 121
           ADI HMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIV TLC
Sbjct: 86  ADIGHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVITLC 145

Query: 122 EGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVL 181
           EGIAKCCPNA VNLISNPVNSTVPIAAEVFKKAGTYDPK+LLGVTMLDVVRANTFVAEVL
Sbjct: 146 EGIAKCCPNAIVNLISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTMLDVVRANTFVAEVL 205

Query: 182 GLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAG 241
           GL P++VDVPVVGGHAGVTILPLLSQVKPP SFT EETEYLT RIQ+GGTEVV+AKAGAG
Sbjct: 206 GLHPKEVDVPVVGGHAGVTILPLLSQVKPPSSFTPEETEYLTKRIQDGGTEVVQAKAGAG 265

Query: 242 SATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQL 301
           SATLSMAYAAVKFADACLRGLRGDAGVVECAFVAS+VTELPFFA+KVRLGR+GAEE++QL
Sbjct: 266 SATLSMAYAAVKFADACLRGLRGDAGVVECAFVASEVTELPFFATKVRLGRRGAEEVYQL 325

Query: 302 GPLNEYE 308
           GPLNEYE
Sbjct: 326 GPLNEYE 332

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|1170897|sp|P46488.1|MDHG_CUCSA RecName: Full=Malate dehydrogenase, glyoxysomal; Flags: Precursor gi|695311|gb|AAC41647.1| glyoxysomal malate dehydrogenase [Cucumis sativus]

 Score =  573 bits (1477), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 285/332 (85%), Positives = 302/332 (90%), Gaps = 3/332 (0%)

Query: 1   MEENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV 60
           MEE+S LR+A CRAKGGA GFKVAILGAAGGIGQPLAMLMK+NPLVSVLHLYDVVN PGV
Sbjct: 25  MEESSVLRRANCRAKGGAPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGV 84

Query: 61  TADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTL 120
           TADISHMDTGAVVRGFLGQ QLE ALTGMDLV+IPAGVPRKPGMTRDDLF INAGIV+TL
Sbjct: 85  TADISHMDTGAVVRGFLGQQQLERALTGMDLVVIPAGVPRKPGMTRDDLFKINAGIVKTL 144

Query: 121 CEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEV 180
           CEGIAKCCP A VNLISNPVNSTVPIAAEVFKKAGTYDPK+LLGVTMLDVVRANTFVAEV
Sbjct: 145 CEGIAKCCPTAIVNLISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTMLDVVRANTFVAEV 204

Query: 181 LGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGA 240
           LGLDPRDV+VPVVGGHAGVTILPLLSQVKPP SFTQEE  YLT+RIQNGGTEVVEAKAGA
Sbjct: 205 LGLDPRDVNVPVVGGHAGVTILPLLSQVKPPSSFTQEEINYLTDRIQNGGTEVVEAKAGA 264

Query: 241 GSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQ 300
           GSATLSMAYAAVKFADACLRGLRGDAGVVECAFV+SQVTELPFFA+KVRLGR G +E++ 
Sbjct: 265 GSATLSMAYAAVKFADACLRGLRGDAGVVECAFVSSQVTELPFFATKVRLGRNGIDEVYS 324

Query: 301 LGPLNEYESGLFCLLHLCFQDWLGESEERVSW 332
           LGPLNEYE      L    ++  G  E+ VS+
Sbjct: 325 LGPLNEYER---IGLEKAKKELAGSIEKGVSF 353

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449451347|ref|XP_004143423.1| PREDICTED: malate dehydrogenase, glyoxysomal-like [Cucumis sativus] gi|449499834|ref|XP_004160930.1| PREDICTED: malate dehydrogenase, glyoxysomal-like [Cucumis sativus]

 Score =  573 bits (1477), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 285/332 (85%), Positives = 302/332 (90%), Gaps = 3/332 (0%)

Query: 1   MEENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV 60
           MEE+S LR+A CRAKGGA GFKVAILGAAGGIGQPLAMLMK+NPLVSVLHLYDVVN PGV
Sbjct: 25  MEESSVLRRANCRAKGGAPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGV 84

Query: 61  TADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTL 120
           TADISHMDTGAVVRGFLGQ QLE ALTGMDLV+IPAGVPRKPGMTRDDLF INAGIV+TL
Sbjct: 85  TADISHMDTGAVVRGFLGQQQLEAALTGMDLVVIPAGVPRKPGMTRDDLFKINAGIVKTL 144

Query: 121 CEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEV 180
           CEGIAKCCP A VNLISNPVNSTVPIAAEVFKKAGTYDPK+LLGVTMLDVVRANTFVAEV
Sbjct: 145 CEGIAKCCPTAIVNLISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTMLDVVRANTFVAEV 204

Query: 181 LGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGA 240
           LGLDPRDV+VPVVGGHAGVTILPLLSQVKPP SFTQEE  YLT+RIQNGGTEVVEAKAGA
Sbjct: 205 LGLDPRDVNVPVVGGHAGVTILPLLSQVKPPSSFTQEEINYLTDRIQNGGTEVVEAKAGA 264

Query: 241 GSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQ 300
           GSATLSMAYAAVKFADACLRGLRGDAGVVECAFV+SQVTELPFFA+KVRLGR G +E++ 
Sbjct: 265 GSATLSMAYAAVKFADACLRGLRGDAGVVECAFVSSQVTELPFFATKVRLGRNGIDEVYS 324

Query: 301 LGPLNEYESGLFCLLHLCFQDWLGESEERVSW 332
           LGPLNEYE      L    ++  G  E+ VS+
Sbjct: 325 LGPLNEYER---IGLEKAKKELAGSIEKGVSF 353

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|158712040|gb|ABW79813.1| malate dehydrogenase [Perilla frutescens]

 Score =  573 bits (1476), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 280/307 (91%), Positives = 293/307 (95%)

Query: 2   EENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVT 61
           E +  LR A CRAKGGA GFKVAILGAAGGIGQPL+MLMK+NPLVSVLHLYDVVN PGVT
Sbjct: 24  EHHPILRAADCRAKGGAPGFKVAILGAAGGIGQPLSMLMKMNPLVSVLHLYDVVNAPGVT 83

Query: 62  ADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLC 121
           AD+SHMDTGAVVRGFLGQPQLE+ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLC
Sbjct: 84  ADVSHMDTGAVVRGFLGQPQLESALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLC 143

Query: 122 EGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVL 181
           EGIAK CPNA VNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVL
Sbjct: 144 EGIAKSCPNAIVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVL 203

Query: 182 GLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAG 241
           GLDPR+V VPVVGGHAGVTILPLLSQVKPPCSFT EETEYLT RIQ+GGTEVV+AKAGAG
Sbjct: 204 GLDPREVSVPVVGGHAGVTILPLLSQVKPPCSFTPEETEYLTKRIQDGGTEVVQAKAGAG 263

Query: 242 SATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQL 301
           SATLSMAYAAVKFAD CLRGL+GDAG+VECAFVASQVT+LPFFA+KVRLGR GAEE+FQL
Sbjct: 264 SATLSMAYAAVKFADLCLRGLKGDAGIVECAFVASQVTDLPFFATKVRLGRGGAEEVFQL 323

Query: 302 GPLNEYE 308
           GPLNEYE
Sbjct: 324 GPLNEYE 330

Source: Perilla frutescens

Species: Perilla frutescens

Genus: Perilla

Family: Lamiaceae

Order: Lamiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	369
TAIR|locus:2062240	354	PMDH1 "peroxisomal NAD-malate	0.829	0.864	0.833	5.6e-132
TAIR|locus:2144781	363	PMDH2 "peroxisomal NAD-malate	0.753	0.765	0.820	7.9e-117
TAIR|locus:2009605	341	mMDH1 "mitochondrial malate de	0.850	0.920	0.616	1.1e-96
TAIR|locus:2086340	341	mMDH2 "mitochondrial malate de	0.794	0.859	0.653	5.9e-96
TAIR|locus:2079177	403	MDH "malate dehydrogenase" [Ar	0.785	0.719	0.616	1e-91
FB|FBgn0262559	336	Mdh2 "Malate dehydrogenase 2"	0.802	0.880	0.557	2.4e-83
UNIPROTKB|E1BVT3	337	MDH2 "Malate dehydrogenase" [G	0.804	0.881	0.551	8.2e-83
WB|WBGene00003162	341	mdh-2 [Caenorhabditis elegans	0.826	0.894	0.556	2.8e-82
UNIPROTKB|I3LP41	338	MDH2 "Malate dehydrogenase" [S	0.777	0.849	0.560	3.6e-82
UNIPROTKB|P00346	338	MDH2 "Malate dehydrogenase, mi	0.777	0.849	0.560	3.6e-82

TAIR|locus:2062240 PMDH1 "peroxisomal NAD-malate dehydrogenase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1294 (460.6 bits), Expect = 5.6e-132, P = 5.6e-132
 Identities = 255/306 (83%), Positives = 270/306 (88%)

Query:     3 ENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA 62
             + S L +  CRAKGG+ GFKVAILGAAGGIGQPLAMLMK+NPLVSVLHLYDV N PGVTA
Sbjct:    25 DGSGLNRVACRAKGGSPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVANAPGVTA 84

Query:    63 DISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCE 122
             DISHMDT AVVRGFLGQPQLE ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTL E
Sbjct:    85 DISHMDTSAVVRGFLGQPQLEEALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLSE 144

Query:   123 GIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXX 182
              IAKCCP A VN+ISNPVNSTVPIAAEVFKKAGT+DPKKL+GVTMLDVVRANTFVAE   
Sbjct:   145 AIAKCCPKAIVNIISNPVNSTVPIAAEVFKKAGTFDPKKLMGVTMLDVVRANTFVAEVMS 204

Query:   183 XXXXXXXXXXXXXHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGS 242
                          HAGVTILPLLSQVKPPCSFTQ+E EYLT+RIQNGGTEVVEAKAGAGS
Sbjct:   205 LDPREVEVPVVGGHAGVTILPLLSQVKPPCSFTQKEIEYLTDRIQNGGTEVVEAKAGAGS 264

Query:   243 ATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLG 302
             ATLSMAYAAV+FADACLRGLRGDA +VECA+VAS VTELPFFASKVRLGR G +E++ LG
Sbjct:   265 ATLSMAYAAVEFADACLRGLRGDANIVECAYVASHVTELPFFASKVRLGRCGIDEVYGLG 324

Query:   303 PLNEYE 308
             PLNEYE
Sbjct:   325 PLNEYE 330

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016615 "malate dehydrogenase activity" evidence=IEA;ISS

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0030060 "L-malate dehydrogenase activity" evidence=IEA

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005777 "peroxisome" evidence=IDA

GO:0031998 "regulation of fatty acid beta-oxidation" evidence=IGI;IMP

GO:0009507 "chloroplast" evidence=IDA

GO:0080093 "regulation of photorespiration" evidence=IMP

GO:0006635 "fatty acid beta-oxidation" evidence=RCA

GO:0007031 "peroxisome organization" evidence=RCA

GO:0009062 "fatty acid catabolic process" evidence=RCA

TAIR|locus:2144781 PMDH2 "peroxisomal NAD-malate dehydrogenase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1151 (410.2 bits), Expect = 7.9e-117, P = 7.9e-117
 Identities = 229/279 (82%), Positives = 243/279 (87%)

Query:     1 ME-ENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG 59
             ME +NS + +  CRAKGG  GFKVAILGAAGGIGQ L++LMK+NPLVS+LHLYDVVN PG
Sbjct:    22 MEAKNSVIGRENCRAKGGNPGFKVAILGAAGGIGQSLSLLMKMNPLVSLLHLYDVVNAPG 81

Query:    60 VTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRT 119
             VTAD+SHMDTGAVVRGFLG  QLE+ALTGMDLVIIPAG+PRKPGMTRDDLF INAGIV+T
Sbjct:    82 VTADVSHMDTGAVVRGFLGAKQLEDALTGMDLVIIPAGIPRKPGMTRDDLFKINAGIVKT 141

Query:   120 LCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAE 179
             LCEG+AKCCPNA VNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT LDV RANTFVAE
Sbjct:   142 LCEGVAKCCPNAIVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTTLDVARANTFVAE 201

Query:   180 XXXXXXXXXXXXXXXXHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAG 239
                             HAGVTILPLLSQVKPP SFT +E EYLTNRIQNGGTEVVEAKAG
Sbjct:   202 VLGLDPREVDVPVVGGHAGVTILPLLSQVKPPSSFTPQEIEYLTNRIQNGGTEVVEAKAG 261

Query:   240 AGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQV 278
             AGSATLSMAYAA KFADACLRGLRGDA VVEC+FVASQV
Sbjct:   262 AGSATLSMAYAAAKFADACLRGLRGDANVVECSFVASQV 300

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016615 "malate dehydrogenase activity" evidence=IEA;ISS

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0030060 "L-malate dehydrogenase activity" evidence=IEA

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0005777 "peroxisome" evidence=IDA

GO:0031998 "regulation of fatty acid beta-oxidation" evidence=IGI;IMP

GO:0048046 "apoplast" evidence=IDA

GO:0080093 "regulation of photorespiration" evidence=IMP

GO:0000096 "sulfur amino acid metabolic process" evidence=RCA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA

GO:0006364 "rRNA processing" evidence=RCA

GO:0006546 "glycine catabolic process" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0006655 "phosphatidylglycerol biosynthetic process" evidence=RCA

GO:0006733 "oxidoreduction coenzyme metabolic process" evidence=RCA

GO:0006766 "vitamin metabolic process" evidence=RCA

GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA

GO:0009072 "aromatic amino acid family metabolic process" evidence=RCA

GO:0009106 "lipoate metabolic process" evidence=RCA

GO:0009108 "coenzyme biosynthetic process" evidence=RCA

GO:0009117 "nucleotide metabolic process" evidence=RCA

GO:0009416 "response to light stimulus" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009657 "plastid organization" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009853 "photorespiration" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0009902 "chloroplast relocation" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010103 "stomatal complex morphogenesis" evidence=RCA

GO:0010207 "photosystem II assembly" evidence=RCA

GO:0010304 "PSII associated light-harvesting complex II catabolic process" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0015994 "chlorophyll metabolic process" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019216 "regulation of lipid metabolic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019748 "secondary metabolic process" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0031408 "oxylipin biosynthetic process" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0043085 "positive regulation of catalytic activity" evidence=RCA

GO:0044242 "cellular lipid catabolic process" evidence=RCA

GO:0044272 "sulfur compound biosynthetic process" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

GO:0042579 "microbody" evidence=ISS

TAIR|locus:2009605 mMDH1 "mitochondrial malate dehydrogenase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 961 (343.3 bits), Expect = 1.1e-96, P = 1.1e-96
 Identities = 196/318 (61%), Positives = 229/318 (72%)

Query:     1 MEENSCLRQAKCR---AKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT 57
             +  ++  +QA  R   + G     KVAILGAAGGIGQPLA+LMK+NPLVS L LYD+ NT
Sbjct:     7 VRSSASAKQAVIRRSFSSGSVPERKVAILGAAGGIGQPLALLMKLNPLVSSLSLYDIANT 66

Query:    58 PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIV 117
             PGV AD+ H++T + V G++G   L  AL G DLVIIPAGVPRKPGMTRDDLFNINAGIV
Sbjct:    67 PGVAADVGHINTRSEVVGYMGDDNLAKALEGADLVIIPAGVPRKPGMTRDDLFNINAGIV 126

Query:   118 RTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFV 177
             + LC  IAK CP+A +N+ISNPVNSTVPIAAE+FKKAG YD KKL GVT LDVVRA TF 
Sbjct:   127 KNLCTAIAKYCPHALINMISNPVNSTVPIAAEIFKKAGMYDEKKLFGVTTLDVVRARTFY 186

Query:   178 AEXXXXXXXXXXXXXXXXHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAK 237
             A                 HAGVTILPL SQ  P  + + +    LT R Q+GGTEVVEAK
Sbjct:   187 AGKANVPVAEVNVPVIGGHAGVTILPLFSQATPQANLSSDILTALTKRTQDGGTEVVEAK 246

Query:   238 AGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEE 297
             AG GSATLSMAYA   FADACL+GL G   V+EC++V S +TELPFFASKVRLG+ G EE
Sbjct:   247 AGKGSATLSMAYAGALFADACLKGLNGVPDVIECSYVQSTITELPFFASKVRLGKNGVEE 306

Query:   298 IFQLGPLNEYES-GLFCL 314
             +  LGPL+++E  GL  L
Sbjct:   307 VLDLGPLSDFEKEGLEAL 324

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM;IDA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016615 "malate dehydrogenase activity" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0030060 "L-malate dehydrogenase activity" evidence=IEA;IMP

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009409 "response to cold" evidence=IEP

GO:0005618 "cell wall" evidence=IDA

GO:0046686 "response to cadmium ion" evidence=IEP;RCA

GO:0042742 "defense response to bacterium" evidence=IEP

GO:0009651 "response to salt stress" evidence=IEP;RCA

GO:0009507 "chloroplast" evidence=IDA

GO:0005507 "copper ion binding" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0048046 "apoplast" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=RCA

GO:0006094 "gluconeogenesis" evidence=RCA

GO:0006096 "glycolysis" evidence=RCA

GO:0006833 "water transport" evidence=RCA

GO:0006972 "hyperosmotic response" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0009266 "response to temperature stimulus" evidence=RCA

TAIR|locus:2086340 mMDH2 "mitochondrial malate dehydrogenase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 954 (340.9 bits), Expect = 5.9e-96, P = 5.9e-96
 Identities = 192/294 (65%), Positives = 218/294 (74%)

Query:    22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 81
             KV ILGAAGGIGQPL++LMK+NPLVS L LYD+ NTPGV AD+ H++T + V G++G   
Sbjct:    31 KVVILGAAGGIGQPLSLLMKLNPLVSSLSLYDIANTPGVAADVGHINTRSQVSGYMGDDD 90

Query:    82 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 141
             L  AL G DLVIIPAGVPRKPGMTRDDLFNINAGIV+ L   IAK CP A VN+ISNPVN
Sbjct:    91 LGKALEGADLVIIPAGVPRKPGMTRDDLFNINAGIVKNLSIAIAKYCPQALVNMISNPVN 150

Query:   142 STVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTI 201
             STVPIAAE+FKKAGTYD KKL GVT LDVVRA TF A                 HAG+TI
Sbjct:   151 STVPIAAEIFKKAGTYDEKKLFGVTTLDVVRARTFYAGKSDVNVAEVNVPVVGGHAGITI 210

Query:   202 LPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRG 261
             LPL SQ  P  + + +    LT R Q+GGTEVVEAKAG GSATLSMAYA   FADACL+G
Sbjct:   211 LPLFSQASPQANLSDDLIRALTKRTQDGGTEVVEAKAGKGSATLSMAYAGALFADACLKG 270

Query:   262 LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYES-GLFCL 314
             L G   VVEC+FV S +TELPFFASKVRLG+ G EE+  LGPL+++E  GL  L
Sbjct:   271 LNGVPNVVECSFVQSTITELPFFASKVRLGKNGVEEVLDLGPLSDFEKEGLEAL 324

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM;IDA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016615 "malate dehydrogenase activity" evidence=IEA;ISS

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0030060 "L-malate dehydrogenase activity" evidence=IEA;IGI

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0042742 "defense response to bacterium" evidence=IEP

GO:0016020 "membrane" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0005507 "copper ion binding" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0009853 "photorespiration" evidence=RCA

TAIR|locus:2079177 MDH "malate dehydrogenase" [Arabidopsis thaliana (taxid:3702)]

 Score = 914 (326.8 bits), Expect = 1.0e-91, P = 1.0e-91
 Identities = 180/292 (61%), Positives = 222/292 (76%)

Query:    19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG 78
             A +KVA+LGAAGGIGQPL++L+K++PLVS LHLYD+ N  GV AD+SH +T + VR F G
Sbjct:    81 ASYKVAVLGAAGGIGQPLSLLIKMSPLVSTLHLYDIANVKGVAADLSHCNTPSQVRDFTG 140

Query:    79 QPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN 138
               +L + L  +++V+IPAGVPRKPGMTRDDLFNINA IV+TL E +A+ CPNA +++ISN
Sbjct:   141 PSELADCLKDVNVVVIPAGVPRKPGMTRDDLFNINANIVKTLVEAVAENCPNAFIHIISN 200

Query:   139 PVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAG 198
             PVNSTVPIAAEV KK G YDPKKL GVT LDVVRANTFV++                HAG
Sbjct:   201 PVNSTVPIAAEVLKKKGVYDPKKLFGVTTLDVVRANTFVSQKKNLKLIDVDVPVIGGHAG 260

Query:   199 VTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADAC 258
             +TILPLLS+ KP  +FT EE + LT RIQN GTEVV+AKAGAGSATLSMAYAA +F ++ 
Sbjct:   261 ITILPLLSKTKPSVNFTDEEIQELTVRIQNAGTEVVDAKAGAGSATLSMAYAAARFVESS 320

Query:   259 LRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQ--LGPLNEYE 308
             LR L GD  V EC+FV S +T+LPFFAS+V++G+ G E + +  L  L EYE
Sbjct:   321 LRALDGDGDVYECSFVESTLTDLPFFASRVKIGKNGLEAVIESDLQGLTEYE 372

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016615 "malate dehydrogenase activity" evidence=IEA;ISS

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0030060 "L-malate dehydrogenase activity" evidence=IEA;IDA

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009409 "response to cold" evidence=IEP

GO:0010319 "stromule" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0009536 "plastid" evidence=IDA

FB|FBgn0262559 Mdh2 "Malate dehydrogenase 2" [Drosophila melanogaster (taxid:7227)]

 Score = 835 (299.0 bits), Expect = 2.4e-83, P = 2.4e-83
 Identities = 165/296 (55%), Positives = 210/296 (70%)

Query:    16 GGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG 75
             G    +KV + GAAGGIGQPL++L+K NPLV+ L LYD+V+TPGV AD+SH+DT +   G
Sbjct:    20 GQQNNYKVTVCGAAGGIGQPLSLLLKQNPLVTDLALYDIVHTPGVAADLSHIDTKSKTAG 79

Query:    76 FLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL 135
             F+G  QL ++L G D+V+IPAGVPRKPGMTRDDLFN+NAGI++ +   IAK CP A V +
Sbjct:    80 FIGADQLGDSLKGSDVVVIPAGVPRKPGMTRDDLFNVNAGIIKDISNSIAKNCPKALVAI 139

Query:   136 ISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXX 195
             I+NPVN+ VPIAAE+ KKAG YDPK+L GV+ LDVVRA  F+                  
Sbjct:   140 ITNPVNTCVPIAAEILKKAGVYDPKRLFGVSTLDVVRARAFIGHALGVDPQTVQIPVIGG 199

Query:   196 HAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFA 255
             H+GVTILP+LSQ +P     Q+  E LT RIQ  GTEVV+AKAGAGSATLSMAYA  +FA
Sbjct:   200 HSGVTILPVLSQSQPLFKGNQDTIEKLTVRIQEAGTEVVKAKAGAGSATLSMAYAGARFA 259

Query:   256 DACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYESGL 311
              + L+GL G+  V+EC++V S VTE  FF++ + LG+ G +E   L  LN+YE  L
Sbjct:   260 GSLLKGLNGEKNVIECSYVQSTVTEATFFSTPLVLGKNGVQENLGLPKLNDYEKKL 315

GO:0005739 "mitochondrion" evidence=IDA;TAS

GO:0030060 "L-malate dehydrogenase activity" evidence=ISS;TAS

GO:0005759 "mitochondrial matrix" evidence=ISS

GO:0006099 "tricarboxylic acid cycle" evidence=ISS;IDA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0005811 "lipid particle" evidence=IDA

GO:0043067 "regulation of programmed cell death" evidence=IMP

GO:0035070 "salivary gland histolysis" evidence=IMP

GO:0016615 "malate dehydrogenase activity" evidence=IDA

GO:0043068 "positive regulation of programmed cell death" evidence=IMP

GO:0006919 "activation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=IMP

GO:0035209 "pupal development" evidence=IMP

UNIPROTKB|E1BVT3 MDH2 "Malate dehydrogenase" [Gallus gallus (taxid:9031)]

 Score = 830 (297.2 bits), Expect = 8.2e-83, P = 8.2e-83
 Identities = 165/299 (55%), Positives = 209/299 (69%)

Query:    12 CRAKGGAA--GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT 69
             CR    +A    KVA+LGA+GGIGQPL++L+K +PLVS L LYD+ +TPGV AD+SH++T
Sbjct:    13 CRGLATSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIET 72

Query:    70 GAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP 129
              A V+GFLG  QL   L G D+V+IPAGVPRKPGMTRDDLFN NA IV TL    AK CP
Sbjct:    73 RANVKGFLGPEQLPECLKGCDVVVIPAGVPRKPGMTRDDLFNTNASIVATLTTACAKHCP 132

Query:   130 NATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXX 189
              A + +ISNPVNST+PI +EVFKK G Y+P ++ GVT LD+VRANTFVAE          
Sbjct:   133 EAMICIISNPVNSTIPITSEVFKKHGVYNPNRIFGVTTLDIVRANTFVAELKGLDPARVS 192

Query:   190 XXXXXXHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAY 249
                   HAG TI+PL+SQ  P   F Q++ E LT RIQ  GTEVV+AKAGAGSATLSMAY
Sbjct:   193 VPVIGGHAGKTIIPLISQCTPKVDFPQDQLEKLTGRIQEAGTEVVKAKAGAGSATLSMAY 252

Query:   250 AAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYE 308
             A  +F  + +  + G  GV+EC+FV S+ TE P+F++ + LG+ G E+   +G +  +E
Sbjct:   253 AGARFVFSLVDAMNGKEGVIECSFVRSEETESPYFSTPLLLGKNGIEKNLGIGKITPFE 311

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0006099 "tricarboxylic acid cycle" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0006475 "internal protein amino acid acetylation" evidence=IEA

GO:0030060 "L-malate dehydrogenase activity" evidence=IEA

WB|WBGene00003162 mdh-2 [Caenorhabditis elegans (taxid:6239)]

 Score = 825 (295.5 bits), Expect = 2.8e-82, P = 2.8e-82
 Identities = 172/309 (55%), Positives = 215/309 (69%)

Query:     4 NSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTAD 63
             NS LR    R    A   KVA+LGAAGGIGQPL +L+K +PLV+ L LYDVVNTPGV AD
Sbjct:    14 NSGLRAVSVRHSSQAP--KVALLGAAGGIGQPLGLLLKQDPLVAHLALYDVVNTPGVAAD 71

Query:    64 ISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEG 123
             +SH+D+ A V    G  +L  A+   D+++IPAGVPRKPGMTRDDLFN NAGIVR L   
Sbjct:    72 LSHIDSNAKVTAHTGPKELYAAVENADVIVIPAGVPRKPGMTRDDLFNTNAGIVRDLAAV 131

Query:   124 IAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXX 183
             IAK  P A + +I+NPVNSTVPIA+EV KKAG YDPK++ GVT LDVVR+  FV+E    
Sbjct:   132 IAKASPKALIAIITNPVNSTVPIASEVLKKAGVYDPKRVFGVTTLDVVRSQAFVSELKGH 191

Query:   184 XXXXXXXXXXXXHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSA 243
                         HAG+TI+PLLSQVKP   F++EE   LT RIQ+ GTEVV AKAGAGSA
Sbjct:   192 DASKTVVPVVGGHAGITIIPLLSQVKPSTKFSEEEISKLTPRIQDAGTEVVNAKAGAGSA 251

Query:   244 TLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTE-LPFFASKVRLGRQGAEEIFQLG 302
             TLSMA A  +FA+A +RG++G+  V +CA+VAS   + + +F++ V LG  G E+I  +G
Sbjct:   252 TLSMALAGARFANALVRGIKGEKNV-QCAYVASDAVKGVEYFSTPVELGPNGVEKILGVG 310

Query:   303 PLNEYESGL 311
              ++ YE  L
Sbjct:   311 KVSAYEQKL 319

GO:0030060 "L-malate dehydrogenase activity" evidence=IEA;ISS

GO:0006108 "malate metabolic process" evidence=IEA;ISS

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016615 "malate dehydrogenase activity" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0008340 "determination of adult lifespan" evidence=IMP

GO:0006898 "receptor-mediated endocytosis" evidence=IMP

GO:0071688 "striated muscle myosin thick filament assembly" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0005739 "mitochondrion" evidence=ISS;IDA

UNIPROTKB|I3LP41 MDH2 "Malate dehydrogenase" [Sus scrofa (taxid:9823)]

 Score = 824 (295.1 bits), Expect = 3.6e-82, P = 3.6e-82
 Identities = 161/287 (56%), Positives = 207/287 (72%)

Query:    22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 81
             KVA+LGA+GGIGQPL++L+K +PLVS L LYD+ +TPGV AD+SH++T A V+G+LG  Q
Sbjct:    26 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQ 85

Query:    82 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 141
             L + L G D+V+IPAGVPRKPGMTRDDLFN NA IV TL    A+ CP+A + +ISNPVN
Sbjct:    86 LPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPVN 145

Query:   142 STVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTI 201
             ST+PI AEVFKK G Y+P K+ GVT LD+VRAN FVAE                HAG TI
Sbjct:   146 STIPITAEVFKKHGVYNPNKIFGVTTLDIVRANAFVAELKGLDPARVSVPVIGGHAGKTI 205

Query:   202 LPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRG 261
             +PL+SQ  P   F Q++   LT RIQ  GTEVV+AKAGAGSATLSMAYA  +F  + +  
Sbjct:   206 IPLISQCTPKVDFPQDQLSTLTGRIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLVDA 265

Query:   262 LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYE 308
             + G  GVVEC+FV SQ T+ P+F++ + LG++G E+   +G ++ +E
Sbjct:   266 MNGKEGVVECSFVKSQETDCPYFSTPLLLGKKGIEKNLGIGKISPFE 312

GO:0030060 "L-malate dehydrogenase activity" evidence=IEA

GO:0006099 "tricarboxylic acid cycle" evidence=IEA

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|P00346 MDH2 "Malate dehydrogenase, mitochondrial" [Sus scrofa (taxid:9823)]

 Score = 824 (295.1 bits), Expect = 3.6e-82, P = 3.6e-82
 Identities = 161/287 (56%), Positives = 207/287 (72%)

Query:    22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 81
             KVA+LGA+GGIGQPL++L+K +PLVS L LYD+ +TPGV AD+SH++T A V+G+LG  Q
Sbjct:    26 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQ 85

Query:    82 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 141
             L + L G D+V+IPAGVPRKPGMTRDDLFN NA IV TL    A+ CP+A + +ISNPVN
Sbjct:    86 LPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPVN 145

Query:   142 STVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTI 201
             ST+PI AEVFKK G Y+P K+ GVT LD+VRAN FVAE                HAG TI
Sbjct:   146 STIPITAEVFKKHGVYNPNKIFGVTTLDIVRANAFVAELKGLDPARVSVPVIGGHAGKTI 205

Query:   202 LPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRG 261
             +PL+SQ  P   F Q++   LT RIQ  GTEVV+AKAGAGSATLSMAYA  +F  + +  
Sbjct:   206 IPLISQCTPKVDFPQDQLSTLTGRIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLVDA 265

Query:   262 LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYE 308
             + G  GVVEC+FV SQ T+ P+F++ + LG++G E+   +G ++ +E
Sbjct:   266 MNGKEGVVECSFVKSQETDCPYFSTPLLLGKKGIEKNLGIGKISPFE 312

GO:0006475 "internal protein amino acid acetylation" evidence=ISS

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0030060 "L-malate dehydrogenase activity" evidence=IEA

GO:0006099 "tricarboxylic acid cycle" evidence=IEA

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A4WF48	MDH_ENT38	1, ., 1, ., 1, ., 3, 7	0.5689	0.7750	0.9166	yes	no
Q43743	MDHG1_BRANA	1, ., 1, ., 1, ., 3, 7	0.8758	0.8292	0.8547	N/A	no
Q5NVR2	MDHM_PONAB	1, ., 1, ., 1, ., 3, 7	0.5876	0.7886	0.8609	yes	no
Q1CEJ3	MDH_YERPN	1, ., 1, ., 1, ., 3, 7	0.5533	0.8211	0.9711	yes	no
A9R584	MDH_YERPG	1, ., 1, ., 1, ., 3, 7	0.5533	0.8211	0.9711	yes	no
Q42972	MDHG_ORYSJ	1, ., 1, ., 1, ., 3, 7	0.8993	0.8346	0.8651	yes	no
Q1CBY7	MDH_YERPA	1, ., 1, ., 1, ., 3, 7	0.5533	0.8211	0.9711	yes	no
P08249	MDHM_MOUSE	1, ., 1, ., 1, ., 3, 7	0.5876	0.7886	0.8609	yes	no
Q31WA4	MDH_SHIBS	1, ., 1, ., 1, ., 3, 7	0.5566	0.8211	0.9711	yes	no
Q9ZP05	MDHG1_ARATH	1, ., 1, ., 1, ., 3, 7	0.8725	0.8292	0.8644	no	no
A7FMU2	MDH_YERP3	1, ., 1, ., 1, ., 3, 7	0.5533	0.8211	0.9711	yes	no
B4F2A1	MDH_PROMH	1, ., 1, ., 1, ., 3, 7	0.5608	0.8130	0.9615	yes	no
P46488	MDHG_CUCSA	1, ., 1, ., 1, ., 3, 7	0.8584	0.8915	0.9241	N/A	no
P61892	MDH_YERPE	1, ., 1, ., 1, ., 3, 7	0.5533	0.8211	0.9711	yes	no
A7MWD3	MDH_VIBHB	1, ., 1, ., 1, ., 3, 7	0.5931	0.7750	0.9196	yes	no
A4TRK3	MDH_YERPP	1, ., 1, ., 1, ., 3, 7	0.5533	0.8211	0.9711	yes	no
Q32LG3	MDHM_BOVIN	1, ., 1, ., 1, ., 3, 7	0.5841	0.7886	0.8609	yes	no
Q9XFW3	MDHG2_BRANA	1, ., 1, ., 1, ., 3, 7	0.8725	0.8292	0.8547	N/A	no
B2U1U9	MDH_SHIB3	1, ., 1, ., 1, ., 3, 7	0.5566	0.8211	0.9711	yes	no
P37228	MDHG_SOYBN	1, ., 1, ., 1, ., 3, 7	0.8697	0.8319	0.8696	yes	no
P0C7R5	MDH_YERPS	1, ., 1, ., 1, ., 3, 7	0.5533	0.8211	0.9711	yes	no
O02640	MDHM_CAEEL	1, ., 1, ., 1, ., 3, 7	0.5838	0.8292	0.8973	yes	no
B7LHU4	MDH_ECO55	1, ., 1, ., 1, ., 3, 7	0.5598	0.8211	0.9711	yes	no
P40926	MDHM_HUMAN	1, ., 1, ., 1, ., 3, 7	0.5876	0.7886	0.8609	yes	no
B4T769	MDH_SALNS	1, ., 1, ., 1, ., 3, 7	0.5598	0.8211	0.9711	yes	no
B1IQP3	MDH_ECOLC	1, ., 1, ., 1, ., 3, 7	0.5566	0.8211	0.9711	yes	no
Q6D9D1	MDH_ERWCT	1, ., 1, ., 1, ., 3, 7	0.5580	0.8238	0.9774	yes	no
B1JMK1	MDH_YERPY	1, ., 1, ., 1, ., 3, 7	0.5533	0.8211	0.9711	yes	no
P04636	MDHM_RAT	1, ., 1, ., 1, ., 3, 7	0.5841	0.7886	0.8609	yes	no
C6DKH1	MDH_PECCP	1, ., 1, ., 1, ., 3, 7	0.5645	0.8238	0.9743	yes	no
P19446	MDHG_CITLA	1, ., 1, ., 1, ., 3, 7	0.8567	0.8997	0.9325	N/A	no
B5REV7	MDH_SALG2	1, ., 1, ., 1, ., 3, 7	0.5598	0.8211	0.9711	yes	no
B7VID0	MDH_VIBSL	1, ., 1, ., 1, ., 3, 7	0.5758	0.7750	0.9196	yes	no
P00346	MDHM_PIG	1, ., 1, ., 1, ., 3, 7	0.5876	0.7886	0.8609	yes	no
Q3YX11	MDH_SHISS	1, ., 1, ., 1, ., 3, 7	0.5566	0.8211	0.9711	yes	no
O82399	MDHG2_ARATH	1, ., 1, ., 1, ., 3, 7	0.8668	0.8346	0.8700	yes	no
B2K2N5	MDH_YERPB	1, ., 1, ., 1, ., 3, 7	0.5533	0.8211	0.9711	yes	no
Q7MYW9	MDH_PHOLL	1, ., 1, ., 1, ., 3, 7	0.5566	0.8211	0.9711	yes	no
A1JIV0	MDH_YERE8	1, ., 1, ., 1, ., 3, 7	0.5501	0.8211	0.9742	yes	no
Q87SU7	MDH_VIBPA	1, ., 1, ., 1, ., 3, 7	0.5862	0.7750	0.9196	yes	no
B7M0U8	MDH_ECO8A	1, ., 1, ., 1, ., 3, 7	0.5598	0.8211	0.9711	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.983
3rd Layer	1.1.1.37	0.979

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	369
PLN00106	323	PLN00106, PLN00106, malate dehydrogenase	0.0
cd01337	310	cd01337, MDH_glyoxysomal_mitochondrial, Glyoxysoma	0.0
TIGR01772	312	TIGR01772, MDH_euk_gproteo, malate dehydrogenase,	1e-148
PRK05086	312	PRK05086, PRK05086, malate dehydrogenase; Provisio	1e-144
PTZ00325	321	PTZ00325, PTZ00325, malate dehydrogenase; Provisio	1e-137
COG0039	313	COG0039, Mdh, Malate/lactate dehydrogenases [Energ	1e-77
pfam00056	142	pfam00056, Ldh_1_N, lactate/malate dehydrogenase,	4e-56
pfam02866	173	pfam02866, Ldh_1_C, lactate/malate dehydrogenase,	3e-51
cd01339	300	cd01339, LDH-like_MDH, L-lactate dehydrogenase-lik	1e-47
PRK06223	307	PRK06223, PRK06223, malate dehydrogenase; Reviewed	4e-46
cd00650	263	cd00650, LDH_MDH_like, NAD-dependent, lactate dehy	2e-37
PTZ00117	319	PTZ00117, PTZ00117, malate dehydrogenase; Provisio	5e-36
PTZ00082	321	PTZ00082, PTZ00082, L-lactate dehydrogenase; Provi	2e-32
cd00300	300	cd00300, LDH_like, L-lactate dehydrogenase-like en	1e-31
TIGR01763	305	TIGR01763, MalateDH_bact, malate dehydrogenase, NA	1e-27
cd05294	309	cd05294, LDH-like_MDH_nadp, A lactate dehydrogenas	2e-24
TIGR01771	299	TIGR01771, L-LDH-NAD, L-lactate dehydrogenase	2e-21
cd05291	306	cd05291, HicDH_like, L-2-hydroxyisocapronate dehyd	3e-20
cd00704	323	cd00704, MDH, Malate dehydrogenase	3e-18
cd05292	308	cd05292, LDH_2, A subgroup of L-lactate dehydrogen	3e-16
TIGR01759	323	TIGR01759, MalateDH-SF1, malate dehydrogenase	3e-16
cd05290	307	cd05290, LDH_3, A subgroup of L-lactate dehydrogen	2e-15
TIGR01758	324	TIGR01758, MDH_euk_cyt, malate dehydrogenase, NAD-	7e-14
PRK00066	315	PRK00066, ldh, L-lactate dehydrogenase; Reviewed	3e-13
cd05293	312	cd05293, LDH_1, A subgroup of L-lactate dehydrogen	3e-12
cd01336	325	cd01336, MDH_cytoplasmic_cytosolic, Cytoplasmic an	5e-12
PLN02602	350	PLN02602, PLN02602, lactate dehydrogenase	4e-11
TIGR01756	313	TIGR01756, LDH_protist, lactate dehydrogenase	3e-10
cd01338	322	cd01338, MDH_choloroplast_like, Chloroplast-like m	2e-08
PLN00135	309	PLN00135, PLN00135, malate dehydrogenase	4e-08
PRK05442	326	PRK05442, PRK05442, malate dehydrogenase; Provisio	3e-06
PLN00112	444	PLN00112, PLN00112, malate dehydrogenase (NADP); P	0.002

>gnl|CDD|215058 PLN00106, PLN00106, malate dehydrogenase

 Score =  643 bits (1660), Expect = 0.0
 Identities = 244/308 (79%), Positives = 264/308 (85%), Gaps = 2/308 (0%)

Query: 1   MEENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV 60
             E S LR   CRAKGGA GFKVA+LGAAGGIGQPL++LMK+NPLVS LHLYD+ NTPGV
Sbjct: 1   SMEASSLRA--CRAKGGAPGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGV 58

Query: 61  TADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTL 120
            AD+SH++T A VRGFLG  QL +AL G DLVIIPAGVPRKPGMTRDDLFNINAGIV+TL
Sbjct: 59  AADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAGVPRKPGMTRDDLFNINAGIVKTL 118

Query: 121 CEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEV 180
           CE +AK CPNA VN+ISNPVNSTVPIAAEV KKAG YDPKKL GVT LDVVRANTFVAE 
Sbjct: 119 CEAVAKHCPNALVNIISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTTLDVVRANTFVAEK 178

Query: 181 LGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGA 240
            GLDP DVDVPVVGGHAG+TILPLLSQ  P  SFT EE E LT RIQNGGTEVVEAKAGA
Sbjct: 179 KGLDPADVDVPVVGGHAGITILPLLSQATPKVSFTDEEIEALTKRIQNGGTEVVEAKAGA 238

Query: 241 GSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQ 300
           GSATLSMAYAA +FADACLRGL G+A VVEC++V S+VTELPFFASKVRLGR G EE+  
Sbjct: 239 GSATLSMAYAAARFADACLRGLNGEADVVECSYVQSEVTELPFFASKVRLGRNGVEEVLG 298

Query: 301 LGPLNEYE 308
           LGPL+EYE
Sbjct: 299 LGPLSEYE 306

Length = 323

>gnl|CDD|133422 cd01337, MDH_glyoxysomal_mitochondrial, Glyoxysomal and mitochondrial malate dehydrogenases

 Score =  553 bits (1427), Expect = 0.0
 Identities = 204/291 (70%), Positives = 241/291 (82%)

Query: 21  FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQP 80
            KVA+LGAAGGIGQPL++L+K+NPLVS L LYD+VNTPGV AD+SH++T A V G+LG  
Sbjct: 1   VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVAADLSHINTPAKVTGYLGPE 60

Query: 81  QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV 140
           +L+ AL G D+V+IPAGVPRKPGMTRDDLFNINAGIVR L   +AK CP A + +ISNPV
Sbjct: 61  ELKKALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVRDLATAVAKACPKALILIISNPV 120

Query: 141 NSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVT 200
           NSTVPIAAEV KKAG YDPK+L GVT LDVVRANTFVAE+LGLDP  V+VPV+GGH+GVT
Sbjct: 121 NSTVPIAAEVLKKAGVYDPKRLFGVTTLDVVRANTFVAELLGLDPAKVNVPVIGGHSGVT 180

Query: 201 ILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLR 260
           ILPLLSQ +PP +F QEE E LT+RIQ GG EVV+AKAGAGSATLSMAYA  +FA++ LR
Sbjct: 181 ILPLLSQCQPPFTFDQEEIEALTHRIQFGGDEVVKAKAGAGSATLSMAYAGARFANSLLR 240

Query: 261 GLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYESGL 311
           GL+G+ GV+ECA+V S VTE PFFA+ V LG+ G E+   LG LN+YE  L
Sbjct: 241 GLKGEKGVIECAYVESDVTEAPFFATPVELGKNGVEKNLGLGKLNDYEKKL 291

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 310

>gnl|CDD|130833 TIGR01772, MDH_euk_gproteo, malate dehydrogenase, NAD-dependent

 Score =  421 bits (1084), Expect = e-148
 Identities = 177/288 (61%), Positives = 223/288 (77%), Gaps = 1/288 (0%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 81
           KVA+LGAAGGIGQPL++L+K+ P VS L LYD+    GV AD+SH+ T A V+GF G+  
Sbjct: 1   KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAADLSHIPTAASVKGFSGEEG 60

Query: 82  LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 141
           LENAL G D+V+IPAGVPRKPGMTRDDLFN+NAGIV+ L   +A+ CP A + +I+NPVN
Sbjct: 61  LENALKGADVVVIPAGVPRKPGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVITNPVN 120

Query: 142 STVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTI 201
           STVPIAAEV KK G YDP KL GVT LD+VRANTFVAE+ G DP +V+VPV+GGH+G TI
Sbjct: 121 STVPIAAEVLKKKGVYDPNKLFGVTTLDIVRANTFVAELKGKDPMEVNVPVIGGHSGETI 180

Query: 202 LPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRG 261
           +PL+SQ      FT+++ E L +RIQN GTEVV+AKAGAGSATLSMA+A  +F  + +RG
Sbjct: 181 IPLISQCPGKVLFTEDQLEALIHRIQNAGTEVVKAKAGAGSATLSMAFAGARFVLSLVRG 240

Query: 262 LRGDAGVVECAFVASQ-VTELPFFASKVRLGRQGAEEIFQLGPLNEYE 308
           L+G+ GVVECA+V S  VTE  FFA+ + LG+ G E+   +G L+ +E
Sbjct: 241 LKGEEGVVECAYVESDGVTEATFFATPLLLGKNGVEKRLGIGKLSSFE 288

This model represents the NAD-dependent malate dehydrogenase found in eukaryotes and certain gamma proteobacteria. The enzyme is involved in the citric acid cycle as well as the glyoxalate cycle. Several isoforms exidt in eukaryotes. In S. cereviseae, for example, there are cytoplasmic, mitochondrial and peroxisomal forms. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases [Energy metabolism, TCA cycle]. Length = 312

>gnl|CDD|235340 PRK05086, PRK05086, malate dehydrogenase; Provisional

 Score =  410 bits (1056), Expect = e-144
 Identities = 169/289 (58%), Positives = 206/289 (71%), Gaps = 4/289 (1%)

Query: 22  KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQ 79
           KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+
Sbjct: 2   KVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGE 61

Query: 80  PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 139
                AL G D+V+I AGV RKPGM R DLFN+NAGIV+ L E +AK CP A + +I+NP
Sbjct: 62  -DPTPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITNP 120

Query: 140 VNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGV 199
           VN+TV IAAEV KKAG YD  KL GVT LDV+R+ TFVAE+ G  P +V+VPV+GGH+GV
Sbjct: 121 VNTTVAIAAEVLKKAGVYDKNKLFGVTTLDVIRSETFVAELKGKQPGEVEVPVIGGHSGV 180

Query: 200 TILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACL 259
           TILPLLSQV P  SFT++E   LT RIQN GTEVVEAKAG GSATLSM  AA +F  + +
Sbjct: 181 TILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLV 239

Query: 260 RGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYE 308
           R L+G+ GVVECA+V        FFA  V LG+ G EE   +G L+ +E
Sbjct: 240 RALQGEQGVVECAYVEGDGKYARFFAQPVLLGKNGVEERLPIGTLSAFE 288

Length = 312

>gnl|CDD|240360 PTZ00325, PTZ00325, malate dehydrogenase; Provisional

 Score =  394 bits (1013), Expect = e-137
 Identities = 184/292 (63%), Positives = 220/292 (75%), Gaps = 3/292 (1%)

Query: 21  FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQP 80
           FKVA+LGAAGGIGQPL++L+K NP VS L LYD+V  PGV AD+SH+DT A V G+    
Sbjct: 9   FKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGE 68

Query: 81  QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV 140
             E AL G DLV+I AGVPRKPGMTRDDLFN NA IVR L   +A   P A V ++SNPV
Sbjct: 69  LWEKALRGADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPV 128

Query: 141 NSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVT 200
           NSTVPIAAE  KKAG YDP+KL GVT LDVVRA  FVAE LG++P DV+VPVVGGH+GVT
Sbjct: 129 NSTVPIAAETLKKAGVYDPRKLFGVTTLDVVRARKFVAEALGMNPYDVNVPVVGGHSGVT 188

Query: 201 ILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLR 260
           I+PLLSQ     S  +E+ E +T+R+Q GG EVV+AK GAGSATLSMAYAA +++ + L+
Sbjct: 189 IVPLLSQT--GLSLPEEQVEQITHRVQVGGDEVVKAKEGAGSATLSMAYAAAEWSTSVLK 246

Query: 261 GLRGDAGVVECAFVASQVT-ELPFFASKVRLGRQGAEEIFQLGPLNEYESGL 311
            LRGD G+VECAFV S +  E PFF+S V LG++G E +  +GPLN YE  L
Sbjct: 247 ALRGDKGIVECAFVESDMRPECPFFSSPVELGKEGVERVLPIGPLNAYEEEL 298

Length = 321

>gnl|CDD|223117 COG0039, Mdh, Malate/lactate dehydrogenases [Energy production and conversion]

 Score =  240 bits (616), Expect = 1e-77
 Identities = 108/302 (35%), Positives = 155/302 (51%), Gaps = 21/302 (6%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 79
           KVA++GA G +G  LA L+ +  L S L L D+      GV  D+SH          +  
Sbjct: 2   KVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITG 60

Query: 80  PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 139
                 L G D+V+I AGVPRKPGMTR DL   NA IV+ + + IAK  P+A V +++NP
Sbjct: 61  DGDYEDLKGADIVVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVTNP 120

Query: 140 VNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGV 199
           V+    IA +    +G    + +   T+LD  R  TF+AE LG+ P+DV   V+G H G 
Sbjct: 121 VDILTYIAMKF---SGFPKNRVIGSGTVLDSARFRTFLAEKLGVSPKDVHAYVIGEH-GD 176

Query: 200 TILPLLSQV----KPPCSF----TQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAA 251
           T++PL SQ     KP        T+E+ E L  R++N G E++EAK GAG      A A 
Sbjct: 177 TMVPLWSQATVGGKPLEELLKEDTEEDLEELIERVRNAGAEIIEAK-GAG-TYYGPAAAL 234

Query: 252 VKFADACLRGLRGDAGVVECAFVASQ-VTELPFFASKVRLGRQGAEEIFQLGPLNEYESG 310
            +  +A LR  +    +    ++  +   E  +F     LG+ G EEI +L  L++ E  
Sbjct: 235 ARMVEAILRDEK--RVLPVSVYLDGEYGVEDVYFGVPAVLGKNGVEEILEL-LLSDDEQE 291

Query: 311 LF 312
             
Sbjct: 292 KL 293

Length = 313

>gnl|CDD|200963 pfam00056, Ldh_1_N, lactate/malate dehydrogenase, NAD binding domain

 Score =  179 bits (457), Expect = 4e-56
 Identities = 60/145 (41%), Positives = 80/145 (55%), Gaps = 6/145 (4%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV--NTPGVTADISHMDTGAVVRGFLGQ 79
           KVA++GA GG+G  LA  + +  L   L L D+      GV  D+SH  T   V G +G 
Sbjct: 2   KVAVVGAGGGVGSSLAFALALQGLADELVLVDINKDKAEGVAMDLSHGSTFLSVPGIVGG 61

Query: 80  PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 139
                AL   D+V+I AGVPRKPGMTR DL N NAGI + +   IAK  P+A V ++SNP
Sbjct: 62  DD-YEALKDADVVVITAGVPRKPGMTRLDLLNRNAGIFKDIVPAIAKSAPDAIVLVVSNP 120

Query: 140 VNSTVPIAAEVFKKAGTYDPKKLLG 164
           V+    IA +V   +G    + +  
Sbjct: 121 VDILTYIAWKV---SGLPPERVIGS 142

L-lactate dehydrogenases are metabolic enzymes which catalyze the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyze the interconversion of malate to oxaloacetate. The enzyme participates in the citric acid cycle. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. N-terminus (this family) is a Rossmann NAD-binding fold. C-terminus is an unusual alpha+beta fold. Length = 142

>gnl|CDD|202437 pfam02866, Ldh_1_C, lactate/malate dehydrogenase, alpha/beta C-terminal domain

 Score =  168 bits (428), Expect = 3e-51
 Identities = 69/155 (44%), Positives = 90/155 (58%), Gaps = 16/155 (10%)

Query: 166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAG----------VTILPLLSQVKPPCSFT 215
           T LD  RA TF+AE  G+DPR V+V V+G H+G          VTI+PL+SQVK     T
Sbjct: 1   TTLDTARARTFLAEKFGVDPRSVNVYVIGEHSGTQFPDWSHAKVTIIPLISQVKENLKDT 60

Query: 216 QEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGD--AGVVECAF 273
             E E L  R+QN G EV+EAK  AGS T SMAYAA + A A LRG  G    GV    +
Sbjct: 61  DWELEELIERVQNAGYEVIEAK--AGSTTYSMAYAAARIAKAILRGTGGVLSVGVYLDGY 118

Query: 274 VASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYE 308
                 +  +F+  V LG+ G E++ ++ PLN++E
Sbjct: 119 Y--GSPDDIYFSVPVVLGKDGVEKVVEILPLNDFE 151

L-lactate dehydrogenases are metabolic enzymes which catalyze the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyze the interconversion of malate to oxaloacetate. The enzyme participates in the citric acid cycle. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. Length = 173

>gnl|CDD|133424 cd01339, LDH-like_MDH, L-lactate dehydrogenase-like malate dehydrogenase proteins

 Score =  163 bits (415), Expect = 1e-47
 Identities = 101/312 (32%), Positives = 152/312 (48%), Gaps = 46/312 (14%)

Query: 23  VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTP-GVTADISHM----DTGAVVRGF 76
           ++I+GA G +G  LA L+ +  L  V+ L D+V   P G   DIS       +   V G 
Sbjct: 1   ISIIGA-GNVGATLAQLLALKELGDVV-LLDIVEGLPQGKALDISQAAPILGSDTKVTGT 58

Query: 77  LGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 136
                +  +    D+V+I AG+PRKPGM+RDDL   NA IV+ + E I K  PNA V ++
Sbjct: 59  NDYEDIAGS----DVVVITAGIPRKPGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVV 114

Query: 137 SNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGG 195
           +NP++        V  KA  +   +++G+  +LD  R   F+AE LG+  +DV   V+GG
Sbjct: 115 TNPLDVMT----YVAYKASGFPRNRVIGMAGVLDSARFRYFIAEELGVSVKDVQAMVLGG 170

Query: 196 HAGVTILPLLSQV----KPPCSF-TQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYA 250
           H G T++PL         P     T+EE + +  R +NGG E+V      GSA  + A A
Sbjct: 171 H-GDTMVPLPRYSTVGGIPLTELITKEEIDEIVERTRNGGAEIVNLL-KTGSAYYAPAAA 228

Query: 251 AVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQ 300
             +  +A L+           L G+ G+ +          +P     V LG+ G E+I +
Sbjct: 229 IAEMVEAILKDKKRVLPCSAYLEGEYGIKDIFV------GVP-----VVLGKNGVEKIIE 277

Query: 301 LGPLNEYESGLF 312
           L  L + E   F
Sbjct: 278 L-DLTDEEKEAF 288

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 300

>gnl|CDD|180477 PRK06223, PRK06223, malate dehydrogenase; Reviewed

 Score =  159 bits (405), Expect = 4e-46
 Identities = 101/312 (32%), Positives = 162/312 (51%), Gaps = 44/312 (14%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTP-GVTADISHMDTGAVVRGFLGQ 79
           K++I+GA G +G  LA L+ +  L  V+ L+D+V   P G   DI+     A V GF  +
Sbjct: 4   KISIIGA-GNVGATLAHLLALKELGDVV-LFDIVEGVPQGKALDIAEA---APVEGFDTK 58

Query: 80  PQLEN---ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 136
               N    + G D+V+I AGVPRKPGM+RDDL  INA I++ + EGI K  P+A V ++
Sbjct: 59  ITGTNDYEDIAGSDVVVITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVV 118

Query: 137 SNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGG 195
           +NPV++   +A     K   +   +++G+  +LD  R  TF+AE L +  +DV   V+GG
Sbjct: 119 TNPVDAMTYVA----LKESGFPKNRVIGMAGVLDSARFRTFIAEELNVSVKDVTAFVLGG 174

Query: 196 HAGVTILPLLSQ-----VKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYA 250
           H G +++PL+       +      ++E+ + +  R + GG E+V      GSA  + A +
Sbjct: 175 H-GDSMVPLVRYSTVGGIPLEDLLSKEKLDEIVERTRKGGAEIVGLL-KTGSAYYAPAAS 232

Query: 251 AVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQ 300
             +  +A L+           L G+ GV +          +P     V+LG+ G E+I +
Sbjct: 233 IAEMVEAILKDKKRVLPCSAYLEGEYGVKDVYV------GVP-----VKLGKNGVEKIIE 281

Query: 301 LGPLNEYESGLF 312
           L  L++ E   F
Sbjct: 282 L-ELDDEEKAAF 292

Length = 307

>gnl|CDD|133419 cd00650, LDH_MDH_like, NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

 Score =  135 bits (341), Expect = 2e-37
 Identities = 63/192 (32%), Positives = 93/192 (48%), Gaps = 9/192 (4%)

Query: 23  VAILGAAGGIGQPLA--MLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG 78
           +A++GA G +G  LA  +      L   L LYD+      GV  D+              
Sbjct: 1   IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSI 60

Query: 79  QPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN 138
                 A    D+VII AGV RKPGM R DL   N  IV+ + + I K  P+A + ++SN
Sbjct: 61  TDDPYEAFKDADVVIITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVSN 120

Query: 139 PVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAG 198
           PV+    I   +  +      +K++G+  LD +R    +AE LG+DP DV V ++G H G
Sbjct: 121 PVD----IITYLVWRYSGLPKEKVIGLGTLDPIRFRRILAEKLGVDPDDVKVYILGEHGG 176

Query: 199 VTILPLLSQVKP 210
            + +P  S V+ 
Sbjct: 177 -SQVPDWSTVRI 187

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 263

>gnl|CDD|173409 PTZ00117, PTZ00117, malate dehydrogenase; Provisional

 Score =  132 bits (335), Expect = 5e-36
 Identities = 97/308 (31%), Positives = 150/308 (48%), Gaps = 31/308 (10%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTP-GVTADISH-MDTGAVVRGFLG 78
           K++++GA G IG  +A+L+    L  V+ LYDV+   P G   D+ H           LG
Sbjct: 7   KISMIGA-GQIGSTVALLILQKNLGDVV-LYDVIKGVPQGKALDLKHFSTLVGSNINILG 64

Query: 79  QPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN 138
               E  +   D+V+I AGV RK  MTR+DL  IN  I++++ E + K CPNA V  ++N
Sbjct: 65  TNNYE-DIKDSDVVVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTN 123

Query: 139 PVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVRANTFVAEVLGLDPRDVDVPVVGGHA 197
           P++       +VF++       K+ G+  +LD  R    +AE LG+ P DV   V+GGH 
Sbjct: 124 PLD----CMVKVFQEKSGIPSNKICGMAGVLDSSRFRCNLAEKLGVSPGDVSAVVIGGH- 178

Query: 198 GVTILPLLSQVK----PPCSF------TQEETEYLTNRIQNGGTEVVEAKAGAGSATLSM 247
           G  ++PL         P   F      T++E   +  + +N G E+V+     GSA  + 
Sbjct: 179 GDLMVPLPRYCTVNGIPLSDFVKKGAITEKEINEIIKKTRNMGGEIVKL-LKKGSAFFAP 237

Query: 248 AYAAVKFADACLRGLRGDAGVVECAFVAS---QVTELPFFASKVRLGRQGAEEIFQLGPL 304
           A A V   +A L+  +    V+ C+   +       L F    V +G +G E++ +L  L
Sbjct: 238 AAAIVAMIEAYLKDEK---RVLVCSVYLNGQYNCKNL-FVGVPVVIGGKGIEKVIEL-EL 292

Query: 305 NEYESGLF 312
           N  E  LF
Sbjct: 293 NAEEKELF 300

Length = 319

>gnl|CDD|173376 PTZ00082, PTZ00082, L-lactate dehydrogenase; Provisional

 Score =  123 bits (311), Expect = 2e-32
 Identities = 107/332 (32%), Positives = 171/332 (51%), Gaps = 47/332 (14%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTP-GVTADISHMDTGAVVR-GFLG 78
           K++++G+ G IG  +A L+ +  L  V+ L+D+V N P G   DISH +  A      +G
Sbjct: 8   KISLIGS-GNIGGVMAYLIVLKNLGDVV-LFDIVKNIPQGKALDISHSNVIAGSNSKVIG 65

Query: 79  QPQLENALTGMDLVIIPAGVPRKPGMT-----RDDLFNINAGIVRTLCEGIAKCCPNATV 133
               E+ + G D+VI+ AG+ ++PG +     RDDL  +NA I+  + EGI K CPNA V
Sbjct: 66  TNNYED-IAGSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFV 124

Query: 134 NLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVRANTFVAEVLGLDPRDVDVPV 192
            +I+NP++  V    ++ ++       K+ G+  +LD  R  T++AE LG++PRDV   V
Sbjct: 125 IVITNPLDVMV----KLLQEHSGLPKNKVCGMAGVLDSSRLRTYIAEKLGVNPRDVHASV 180

Query: 193 VGGHAGVTILPLLSQVK----PPCSF------TQEETEYLTNRIQNGGTEVVEAKAGAGS 242
           +G H G  ++PL   V     P   F      TQEE + +  R +N G E+V+   G GS
Sbjct: 181 IGAH-GDKMVPLPRYVTVGGIPLSEFIKKGLITQEEIDEIVERTRNTGKEIVDL-LGTGS 238

Query: 243 ATLSMAYAAVKFADACLRGLRGDAGVVEC-AFVASQ--VTELPFFASKVRLGRQGAEEIF 299
           A  + A AA++ A+A L+  +    V+ C A++  Q    ++ +  +   +G  G E+I 
Sbjct: 239 AYFAPAAAAIEMAEAYLKDKK---RVLPCSAYLEGQYGHKDI-YMGTPAVIGANGVEKII 294

Query: 300 QLGPLNEYESGLFCLLHLCFQDWLGESEERVS 331
           +L  L   E           Q    ES + V 
Sbjct: 295 EL-DLTPEE-----------QKKFDESIKEVK 314

Length = 321

>gnl|CDD|133418 cd00300, LDH_like, L-lactate dehydrogenase-like enzymes

 Score =  120 bits (304), Expect = 1e-31
 Identities = 86/311 (27%), Positives = 134/311 (43%), Gaps = 44/311 (14%)

Query: 23  VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHM----DTGAVVRGF 76
           + I+GA G +G  +A  +    L S L L DV      G   D+SH      TG +VRG 
Sbjct: 1   ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG- 58

Query: 77  LGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 136
                        D+V+I AG PRKPG TR DL N NA I+R++   + K  P+A + ++
Sbjct: 59  ----GDYADAADADIVVITAGAPRKPGETRLDLINRNAPILRSVITNLKKYGPDAIILVV 114

Query: 137 SNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGG 195
           SNPV+    I   V +K       +++G  T+LD  R  + +AE L +DP+ V   V+G 
Sbjct: 115 SNPVD----ILTYVAQKLSGLPKNRVIGSGTLLDSARFRSLLAEKLDVDPQSVHAYVLGE 170

Query: 196 HAGVTILPLLSQVK-------PPCSFTQEETEYLTNRIQNGGTEVVEAKAGA----GSAT 244
           H G + +   S              FT+ + E +   ++  G E++  K        +A 
Sbjct: 171 H-GDSQVVAWSTATVGGLPLEELAPFTKLDLEAIEEEVRTSGYEIIRLKGATNYGIATAI 229

Query: 245 LSMAYAAVKFADACL---RGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQL 301
             +  + +      L       G  G+ + A        +P       +GR+G   I ++
Sbjct: 230 ADIVKSILLDERRVLPVSAVQEGQYGIEDVAL------SVP-----AVVGREGVVRILEI 278

Query: 302 GPLNEYESGLF 312
            PL E E    
Sbjct: 279 -PLTEDEEAKL 288

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 300

>gnl|CDD|233562 TIGR01763, MalateDH_bact, malate dehydrogenase, NAD-dependent

 Score =  110 bits (276), Expect = 1e-27
 Identities = 90/310 (29%), Positives = 151/310 (48%), Gaps = 40/310 (12%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGF--- 76
           K++++GA G +G   A  +    L  ++ L DVV     G   D   M   + V GF   
Sbjct: 3   KISVIGA-GFVGATTAFRLAEKELADLV-LLDVVEGIPQGKALD---MYEASPVGGFDTK 57

Query: 77  -LGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL 135
             G     +     D+V+I AG+PRKPGM+R+DL ++NAGIVR +   I +  PN  + +
Sbjct: 58  VTGTNNYADT-ANSDIVVITAGLPRKPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVV 116

Query: 136 ISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVRANTFVAEVLGLDPRDVDVPVVG 194
           +SNP+++   +A +       +  ++++G   +LD  R  TF+A  LG+  +DV   V+G
Sbjct: 117 VSNPLDAMTYVAWQK----SGFPKERVIGQAGVLDSARFRTFIAMELGVSVQDVTACVLG 172

Query: 195 GHAGVTILPL----------LSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSAT 244
           GH G  ++PL          ++ +        E    +  R + GG E+V      GSA 
Sbjct: 173 GH-GDAMVPLVRYSTVAGIPVADLISA-----ERIAEIVERTRKGGGEIVNL-LKQGSAY 225

Query: 245 LSMAYAAVKFADACLRGLRGDAGVVEC-AFVASQV-TELPFFASKVRLGRQGAEEIFQLG 302
            + A + V+  +A L+  +    V+ C A++  Q   +  +    V LG+ G E I++L 
Sbjct: 226 YAPAASVVEMVEAILKDRK---RVLPCAAYLDGQYGIDGIYVGVPVILGKNGVEHIYEL- 281

Query: 303 PLNEYESGLF 312
            L++ E  L 
Sbjct: 282 KLDQSELALL 291

This enzyme converts malate into oxaloacetate in the citric acid cycle. The critical residues which discriminate malate dehydrogenase from lactate dehydrogenase have been characterized , and have been used to set the cutoffs for this model. Sequences showing [aflimv][ap]R[rk]pgM[st] and [ltv][ilm]gGhgd were kept above trusted, while those in which the capitalized residues in the patterns were found to be Q, E and E were kept below the noise cutoff. Some sequences in the grey zone have been annotated as malate dehydrogenases, but none have been characterized. Phylogenetically, a clade of sequences from eukaryotes such as Toxoplasma and Plasmodium which include a characterized lactate dehydrogenase and show abiguous critical residue patterns appears to be more closely related to these bacterial sequences than other eukaryotic sequences. These are relatively long branch and have been excluded from the model. All other sequences falling below trusted appear to be phylogenetically outside of the clade including the trusted hits. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable [Energy metabolism, TCA cycle]. Length = 305

>gnl|CDD|133430 cd05294, LDH-like_MDH_nadp, A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

 Score =  101 bits (253), Expect = 2e-24
 Identities = 67/243 (27%), Positives = 115/243 (47%), Gaps = 43/243 (17%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHL-----------------YDVVNTPGVTADI 64
           KV+I+GA+G +G   A+L+    +V  ++L                 YD +   G+ A+I
Sbjct: 2   KVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEI 61

Query: 65  SHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGI 124
                 + V              G D+VII AGVPRK GM+R DL   NA IV+   + I
Sbjct: 62  KISSDLSDV-------------AGSDIVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQI 108

Query: 125 AKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGL 183
           A+  P+  + +++NPV+     A    K++G +D  ++ G+ T LD +R    +A+   +
Sbjct: 109 AEFAPDTKILVVTNPVDVMTYKA---LKESG-FDKNRVFGLGTHLDSLRFKVAIAKHFNV 164

Query: 184 DPRDVDVPVVGGHAGVTILPLLSQVK----PPCSFTQEE---TEYLTNRIQNGGTEVVEA 236
              +V   ++G H G +++PL+S       P   F + +    E +   ++N G  ++  
Sbjct: 165 HISEVHTRIIGEH-GDSMVPLISSTSIGGIPIKRFPEYKDFDVEKIVETVKNAGQNIISL 223

Query: 237 KAG 239
           K G
Sbjct: 224 KGG 226

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)- binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 309

>gnl|CDD|233566 TIGR01771, L-LDH-NAD, L-lactate dehydrogenase

 Score = 93.0 bits (232), Expect = 2e-21
 Identities = 63/241 (26%), Positives = 106/241 (43%), Gaps = 26/241 (10%)

Query: 86  LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVP 145
               DLV+I AG P+KPG TR +L   N  I++++   + K   +    + +NPV+    
Sbjct: 62  CKDADLVVITAGAPQKPGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVATNPVD---- 117

Query: 146 IAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPL 204
           I   V  K   +   +++G  T+LD  R    +AE LG+DP+ V   ++G H G + +P+
Sbjct: 118 ILTYVAWKLSGFPKNRVIGSGTVLDTARLRYLLAEKLGVDPQSVHAYIIGEH-GDSEVPV 176

Query: 205 LSQVK----PPCSF---TQEETEYLTNRI----QNGGTEVVEAKAGAGSATLSMAYAAVK 253
            S       P   +      ET+     I    ++   E++  K   G+    +  A  +
Sbjct: 177 WSSATIGGVPLLDYLKAKGTETDLDLEEIEKEVRDAAYEIINRK---GATYYGIGMAVAR 233

Query: 254 FADACLRGLRGDAGVVEC-AFVASQVTELPFFASKVR-LGRQGAEEIFQLGPLNEYESGL 311
             +A L        V+   A++  +      +      LGR G EEI +L PL++ E   
Sbjct: 234 IVEAILHDEN---RVLPVSAYLDGEYGIKDVYIGVPAVLGRNGVEEIIEL-PLSDEEKEA 289

Query: 312 F 312
           F
Sbjct: 290 F 290

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases [Energy metabolism, Anaerobic, Energy metabolism, Glycolysis/gluconeogenesis]. Length = 299

>gnl|CDD|133427 cd05291, HicDH_like, L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

 Score = 89.4 bits (223), Expect = 3e-20
 Identities = 65/245 (26%), Positives = 104/245 (42%), Gaps = 41/245 (16%)

Query: 89  MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAA 148
            D+V+I AG P+KPG TR DL   NA I++++   I     +    + SNPV+    +  
Sbjct: 69  ADIVVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASNPVD----VIT 124

Query: 149 EVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGGH--------AGV 199
            V +K       +++G  T LD  R    +AE L +DPR V   V+G H        + V
Sbjct: 125 YVVQKLSGLPKNRVIGTGTSLDTARLRRALAEKLNVDPRSVHAYVLGEHGDSQFVAWSTV 184

Query: 200 TIL--PLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADA 257
           T+   PLL  +K     ++ + + +   ++  G E++  K   G+    +A A  +   A
Sbjct: 185 TVGGKPLLDLLKEGK-LSELDLDEIEEDVRKAGYEIINGK---GATYYGIATALARIVKA 240

Query: 258 CLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEY 307
            L            L G+ G  +            +      +GR G EE+ +L  L E 
Sbjct: 241 ILNDENAILPVSAYLDGEYGEKDV-----------YIGVPAIIGRNGVEEVIEL-DLTEE 288

Query: 308 ESGLF 312
           E   F
Sbjct: 289 EQEKF 293

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 306

>gnl|CDD|133420 cd00704, MDH, Malate dehydrogenase

 Score = 84.2 bits (209), Expect = 3e-18
 Identities = 72/262 (27%), Positives = 104/262 (39%), Gaps = 48/262 (18%)

Query: 22  KVAILGAAGGIGQPLA-------MLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAV-- 72
            V I GAAG IG  L        +     P++  LHL D+         +  ++   +  
Sbjct: 2   HVLITGAAGQIGYNLLFLIASGELFGDDQPVI--LHLLDI------PPAMKALEGVVMEL 53

Query: 73  -------VRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIA 125
                  ++G +     E A   +D+ I+    PRKPGM R DL   NA I +   E + 
Sbjct: 54  QDCAFPLLKGVVITTDPEEAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALN 113

Query: 126 KCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLD 184
           K   P   V ++ NP N+   IA    K A    PK    +T LD  RA   VA  LG+ 
Sbjct: 114 KVAKPTVKVLVVGNPANTNALIAL---KNAPNLPPKNFTALTRLDHNRAKAQVARKLGVR 170

Query: 185 PRDV-DVPVVGGHAGVTILPLLSQ-------------VKPPCSFTQEETEYLTNRIQNGG 230
             DV +V + G H+  T +P LS                    +  +E       +Q  G
Sbjct: 171 VSDVKNVIIWGNHSN-TQVPDLSNAVVYGPGGTEWVLDLLDEEWLNDE---FVKTVQKRG 226

Query: 231 TEVVEAKAGAGSATLSMAYAAV 252
             +++ + GA SA  S A A  
Sbjct: 227 AAIIKKR-GASSA-ASAAKAIA 246

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 323

>gnl|CDD|133428 cd05292, LDH_2, A subgroup of L-lactate dehydrogenases

 Score = 77.9 bits (193), Expect = 3e-16
 Identities = 89/314 (28%), Positives = 135/314 (42%), Gaps = 52/314 (16%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA---DISH-MDTGAVVRGFL 77
           KVAI+GA G +G   A  + +  L S + L D+ N         D++H       VR + 
Sbjct: 2   KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDI-NKAKAEGEAMDLAHGTPFVKPVRIYA 59

Query: 78  GQPQ-LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 136
           G     + A    D+V+I AG  +KPG TR DL   N  I + +   I K  P+A + ++
Sbjct: 60  GDYADCKGA----DVVVITAGANQKPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVV 115

Query: 137 SNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGG 195
           +NPV+    +   V  K     P +++G  T+LD  R    + E LG+DPR V   ++G 
Sbjct: 116 TNPVD----VLTYVAYKLSGLPPNRVIGSGTVLDTARFRYLLGEHLGVDPRSVHAYIIGE 171

Query: 196 H-------------AGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGA-- 240
           H              GV +         P  F +E  E +   ++N   E++E K GA  
Sbjct: 172 HGDSEVAVWSSANIGGVPLDEFCKLCGRP--FDEEVREEIFEEVRNAAYEIIERK-GATY 228

Query: 241 ---GSATLSMAYAAVKFADACL---RGLRGDAGVVECAFVASQVTELPFFASKVRLGRQG 294
              G A   +  A ++  ++ L     L G  G+ + A        LP     V  GR G
Sbjct: 229 YAIGLALARIVEAILRDENSVLTVSSLLDGQYGIKDVAL------SLP---CIV--GRSG 277

Query: 295 AEEIFQLGPLNEYE 308
            E +    PL+E E
Sbjct: 278 VERVLPP-PLSEEE 290

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 308

>gnl|CDD|130820 TIGR01759, MalateDH-SF1, malate dehydrogenase

 Score = 78.1 bits (193), Expect = 3e-16
 Identities = 74/252 (29%), Positives = 112/252 (44%), Gaps = 31/252 (12%)

Query: 22  KVAILGAAGGIGQPLA-------MLMKINPLVSVLHLYDVVNT----PGVTADISHMDTG 70
           +VA+ GAAG IG  L        +  K  P+V  LHL D+        GV  ++   D  
Sbjct: 5   RVAVTGAAGQIGYSLLFRIASGELFGKDQPVV--LHLLDIPPAMKALEGVAMEL--EDCA 60

Query: 71  -AVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC- 128
             ++ G +     E A   +D  ++    PRKPGM R DL + N  I +   + + K   
Sbjct: 61  FPLLAGVVATTDPEEAFKDVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAK 120

Query: 129 PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDV 188
            +  V ++ NP N+   IA+   K A    PK    +T LD  RA   +A   G+   DV
Sbjct: 121 KDVKVLVVGNPANTNALIAS---KNAPDIPPKNFSAMTRLDHNRAKYQLAAKAGVPVSDV 177

Query: 189 -DVPVVGGHAGVTILPLLSQVK---PPCSFTQEETEYLTN----RIQNGGTEVVEAKAGA 240
            +V + G H+  T +P  +       P     ++ ++L       +Q  G  V+EA+ GA
Sbjct: 178 KNVIIWGNHSN-TQVPDFTHATVDGRPVKEVIKDDKWLEGEFIPTVQQRGAAVIEAR-GA 235

Query: 241 GSATLSMAYAAV 252
            SA  S A AA+
Sbjct: 236 SSA-ASAANAAI 246

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. Length = 323

>gnl|CDD|133426 cd05290, LDH_3, A subgroup of L-lactate dehydrogenases

 Score = 75.8 bits (187), Expect = 2e-15
 Identities = 57/193 (29%), Positives = 82/193 (42%), Gaps = 31/193 (16%)

Query: 85  ALTGMDLVIIPAGVPRKPGMT--RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS 142
                D+++I AG    PG T  R DL   NA I+R +   I K    A + LI+NP++ 
Sbjct: 65  DCADADIIVITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILITNPLDI 124

Query: 143 TVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTI 201
            V IAA  F     Y   K++G  TMLD  R    VA+  G+DP++V   V+G H G   
Sbjct: 125 AVYIAATEFD----YPANKVIGTGTMLDTARLRRIVADKYGVDPKNVTGYVLGEH-GSHA 179

Query: 202 LPLLSQV---------------KPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLS 246
            P+ S V               K P        + L   +     +V   K G  +A ++
Sbjct: 180 FPVWSLVNIAGLPLDELEALFGKEPID-----KDELLEEVVQAAYDVFNRK-GWTNAGIA 233

Query: 247 MAYAAVKFADACL 259
              +A +   A L
Sbjct: 234 K--SASRLIKAIL 244

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 307

>gnl|CDD|130819 TIGR01758, MDH_euk_cyt, malate dehydrogenase, NAD-dependent

 Score = 71.4 bits (175), Expect = 7e-14
 Identities = 69/254 (27%), Positives = 104/254 (40%), Gaps = 31/254 (12%)

Query: 22  KVAILGAAGGIGQPLA-------MLMKINPLVSVLHLYDVVNTPGVTADISH--MDTG-A 71
           +V + GAAG IG  L        ML K  P++  LHL D+     V   +    MD    
Sbjct: 1   RVVVTGAAGQIGYALLPMIARGRMLGKDQPII--LHLLDIPPAMKVLEGVVMELMDCAFP 58

Query: 72  VVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAK-CCPN 130
           ++ G +       A T +D+ I+    PRK GM R DL + N  I +     + K    +
Sbjct: 59  LLDGVVPTHDPAVAFTDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKD 118

Query: 131 ATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDV-D 189
             V ++ NP N+   + +     A +  PK    +T LD  RA   VAE  G+   DV +
Sbjct: 119 CKVLVVGNPANTNALVLSNY---APSIPPKNFSALTRLDHNRALAQVAERAGVPVSDVKN 175

Query: 190 VPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNR-----------IQNGGTEVVEAKA 238
           V + G H+  T  P ++         Q+                   +Q  G  ++ A+ 
Sbjct: 176 VIIWGNHSS-TQYPDVNHATVTKGGKQKPVREAIKDDAYLDGEFITTVQQRGAAIIRAR- 233

Query: 239 GAGSATLSMAYAAV 252
              S+ LS A AAV
Sbjct: 234 -KLSSALSAAKAAV 246

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography. Length = 324

>gnl|CDD|178836 PRK00066, ldh, L-lactate dehydrogenase; Reviewed

 Score = 69.5 bits (171), Expect = 3e-13
 Identities = 64/244 (26%), Positives = 105/244 (43%), Gaps = 36/244 (14%)

Query: 88  GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIA 147
             DLV+I AG P+KPG TR DL   N  I +++   +     +    + SNPV+    I 
Sbjct: 73  DADLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVASNPVD----IL 128

Query: 148 AEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGGH---------- 196
                K   +  ++++G  T LD  R    ++E L +DPR V   ++G H          
Sbjct: 129 TYATWKLSGFPKERVIGSGTSLDSARFRYMLSEKLDVDPRSVHAYIIGEHGDTEFPVWSH 188

Query: 197 AGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFA- 255
           A V  +PL   ++    + +E+ + +   +++   E++E K GA    ++MA A +  A 
Sbjct: 189 ANVAGVPLEEYLEENEQYDEEDLDEIFENVRDAAYEIIEKK-GATYYGIAMALARITKAI 247

Query: 256 ----DACL---RGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYE 308
               +A L     L G  G  +            +      + R G  EI +L PLN+ E
Sbjct: 248 LNNENAVLPVSAYLEGQYGEEDV-----------YIGVPAVVNRNGIREIVEL-PLNDDE 295

Query: 309 SGLF 312
              F
Sbjct: 296 KQKF 299

Length = 315

>gnl|CDD|133429 cd05293, LDH_1, A subgroup of L-lactate dehydrogenases

 Score = 66.5 bits (163), Expect = 3e-12
 Identities = 77/323 (23%), Positives = 126/323 (39%), Gaps = 56/323 (17%)

Query: 20  GFKVAILGA-AGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF 76
             KV ++G    G+   +++L K   L   L L DVV     G   D+ H   G+    F
Sbjct: 3   RNKVTVVGVGQVGMACAISILAK--GLADELVLVDVVEDKLKGEAMDLQH---GSA---F 54

Query: 77  LGQPQLE-----NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNA 131
           L  P++E     +      +VI+ AG  +  G +R DL   N  I + +   + K  PNA
Sbjct: 55  LKNPKIEADKDYSVTANSKVVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNA 114

Query: 132 TVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDV 190
            + ++SNPV+    I   V  K       +++G    LD  R    +AE LG+ P  V  
Sbjct: 115 ILLVVSNPVD----IMTYVAWKLSGLPKHRVIGSGCNLDSARFRYLIAERLGVAPSSVHG 170

Query: 191 PVVGGH--------AGVTI--LPLLSQVKPPCSFTQEETEY-LTNRIQNGGTEVVEAKAG 239
            ++G H        +GV +  + L        +    E    +  ++ +   EV++ K  
Sbjct: 171 WIIGEHGDSSVPVWSGVNVAGVRLQDLNPDIGTDKDPEKWKEVHKQVVDSAYEVIKLK-- 228

Query: 240 AGSATLSMAYAAVKFADACLRGLR----------GDAGVVECAFVASQVTELPFFASKVR 289
            G  + ++  +     DA LR             G  G+ +  F++     LP       
Sbjct: 229 -GYTSWAIGLSVADLVDAILRNTGRVHSVSTLVKGLHGIEDEVFLS-----LP-----CI 277

Query: 290 LGRQGAEEIFQLGPLNEYESGLF 312
           LG  G   + +  PL E E    
Sbjct: 278 LGENGITHVIKQ-PLTEEEQEKL 299

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 312

>gnl|CDD|133421 cd01336, MDH_cytoplasmic_cytosolic, Cytoplasmic and cytosolic Malate dehydrogenases

 Score = 65.7 bits (161), Expect = 5e-12
 Identities = 67/259 (25%), Positives = 108/259 (41%), Gaps = 41/259 (15%)

Query: 22  KVAILGAAGGIGQPLA-------MLMKINPLVSVLHLYDVVNTP------GVTADISHMD 68
           +V + GAAG I   L        +     P++  LHL D+   P      GV  ++   D
Sbjct: 4   RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVI--LHLLDI--PPALKALEGVVMEL--QD 57

Query: 69  TG-AVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC 127
               +++  +     E A   +D+ I+   +PRK GM R DL   N  I +   E + K 
Sbjct: 58  CAFPLLKSVVATTDPEEAFKDVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKY 117

Query: 128 C-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPR 186
              N  V ++ NP N+   I     K A +   +    +T LD  RA + +A  LG+   
Sbjct: 118 AKKNVKVLVVGNPANTNALILL---KYAPSIPKENFTALTRLDHNRAKSQIALKLGVPVS 174

Query: 187 DV-DVPVVGGHAGVTILPLLSQ--------VKPPCSFTQEETEYLTN----RIQNGGTEV 233
           DV +V + G H+  T  P ++          KP     +++  +L       +Q  G  V
Sbjct: 175 DVKNVIIWGNHSS-TQYPDVNHATVELNGKGKPAREAVKDD-AWLNGEFISTVQKRGAAV 232

Query: 234 VEAKAGAGSATLSMAYAAV 252
           ++A+    SA +S A A  
Sbjct: 233 IKAR-KLSSA-MSAAKAIC 249

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 325

>gnl|CDD|178212 PLN02602, PLN02602, lactate dehydrogenase

 Score = 63.3 bits (154), Expect = 4e-11
 Identities = 76/295 (25%), Positives = 129/295 (43%), Gaps = 38/295 (12%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV--NTPGVTADISHMDTGAVVRGFLGQ 79
           KV+++G  G +G  +A  +    L   L L DV      G   D+ H         FL +
Sbjct: 39  KVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQH------AAAFLPR 91

Query: 80  PQL----ENALT-GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 134
            ++    + A+T G DL I+ AG  + PG +R +L   N  + R +   +AK  P+  + 
Sbjct: 92  TKILASTDYAVTAGSDLCIVTAGARQIPGESRLNLLQRNVALFRKIIPELAKYSPDTILL 151

Query: 135 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVV 193
           ++SNPV+    +A   +K +G +   +++G  T LD  R    +A+ L ++ +DV   +V
Sbjct: 152 IVSNPVDVLTYVA---WKLSG-FPANRVIGSGTNLDSSRFRFLIADHLDVNAQDVQAYIV 207

Query: 194 GGH-------------AGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGA 240
           G H              GV +L  L   K   ++ +E  E +   + +   EV++ K   
Sbjct: 208 GEHGDSSVALWSSVSVGGVPVLSFLE--KQQIAYEKETLEEIHRAVVDSAYEVIKLK--- 262

Query: 241 GSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFAS-KVRLGRQG 294
           G  + ++ Y+      + LR  R    V   A     + E   F S   +LGR G
Sbjct: 263 GYTSWAIGYSVASLVRSLLRDQRRIHPVSVLAKGFHGIDEGDVFLSLPAQLGRNG 317

Length = 350

>gnl|CDD|130817 TIGR01756, LDH_protist, lactate dehydrogenase

 Score = 60.3 bits (146), Expect = 3e-10
 Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 4/135 (2%)

Query: 75  GFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATV 133
           G +   +LE A   +D   + A VP KPG  R DL   N  I +   E +++   P   V
Sbjct: 47  GTIVTTKLEEAFKDIDCAFLVASVPLKPGEVRADLLTKNTPIFKATGEALSEYAKPTVKV 106

Query: 134 NLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV 193
            +I NPVN+   +A      A     +    + MLD  RA + +A  L +    +   VV
Sbjct: 107 LVIGNPVNTNCLVA---MLHAPKLSAENFSSLCMLDHNRAVSRIASKLKVPVDHIYHVVV 163

Query: 194 GGHAGVTILPLLSQV 208
            G+   +++  L+  
Sbjct: 164 WGNHAESMVADLTHA 178

This model represents a family of protist lactate dehydrogenases which have aparrently evolved from a recent protist malate dehydrogenase ancestor. Lactate dehydrogenase converts the hydroxyl at C-2 of lactate to a carbonyl in the product, pyruvate. The preference of this enzyme for NAD or NADP has not been determined. A critical residue in malate dehydrogenase, arginine-91 (T. vaginalis numbering) has been mutated to a leucine, eliminating the positive charge which complemeted the carboxylate in malate which is absent in lactate. Several other more subtle changes are proposed to make the active site smaller to accomadate the less bulky lactate molecule. Length = 313

>gnl|CDD|133423 cd01338, MDH_choloroplast_like, Chloroplast-like malate dehydrogenases

 Score = 54.5 bits (132), Expect = 2e-08
 Identities = 63/253 (24%), Positives = 103/253 (40%), Gaps = 33/253 (13%)

Query: 22  KVAILGAAGGIGQPL-------AMLMKINPLVSVLHLYDVVNT----PGVTADISHMDTG 70
           +VA+ GAAG IG  L        M     P++  L L ++        GV  ++   +  
Sbjct: 4   RVAVTGAAGQIGYSLLFRIASGEMFGPDQPVI--LQLLELPQALKALEGVAMEL---EDC 58

Query: 71  A--VVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAK-C 127
           A  ++   +       A    D  ++    PR PGM R DL   N  I     + +    
Sbjct: 59  AFPLLAEIVITDDPNVAFKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVA 118

Query: 128 CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRD 187
             +  V ++ NP N+   IA    K A    P     +T LD  RA + +A+  G+   D
Sbjct: 119 SRDVKVLVVGNPCNTNALIAM---KNAPDIPPDNFTAMTRLDHNRAKSQLAKKAGVPVTD 175

Query: 188 V-DVPVVGGHAGVTILPLLSQVK---PPCSFTQEETEYLTN----RIQNGGTEVVEAKAG 239
           V ++ + G H+  T  P  +       P +    +  +L +     +Q  G  +++A+ G
Sbjct: 176 VKNMVIWGNHSP-TQYPDFTNATIGGKPAAEVINDRAWLEDEFIPTVQKRGAAIIKAR-G 233

Query: 240 AGSATLSMAYAAV 252
           A SA  S A AA+
Sbjct: 234 ASSAA-SAANAAI 245

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 322

>gnl|CDD|177744 PLN00135, PLN00135, malate dehydrogenase

 Score = 54.0 bits (130), Expect = 4e-08
 Identities = 46/175 (26%), Positives = 83/175 (47%), Gaps = 17/175 (9%)

Query: 27  GAAGGIGQPLAM-LMKINPLVSVLHLYDVVNTPGVTADISHMDTG-AVVRGFLGQPQLEN 84
           G   G  QP+ + ++ I P    L+        GV  ++  +D    +++G +    +  
Sbjct: 5   GVMLGPDQPVILHMLDIPPAAEALN--------GVKMEL--IDAAFPLLKGVVATTDVVE 54

Query: 85  ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNST 143
           A  G+++ ++  G PRK GM R D+ + N  I ++    + K   P+  V +++NP N+ 
Sbjct: 55  ACKGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKHAAPDCKVLVVANPANTN 114

Query: 144 VPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDV-DVPVVGGHA 197
             I  E    A +   K +  +T LD  RA   ++E LG+   DV +V + G H+
Sbjct: 115 ALILKEF---APSIPEKNITCLTRLDHNRALGQISERLGVPVSDVKNVIIWGNHS 166

Length = 309

>gnl|CDD|235468 PRK05442, PRK05442, malate dehydrogenase; Provisional

 Score = 48.3 bits (116), Expect = 3e-06
 Identities = 68/253 (26%), Positives = 107/253 (42%), Gaps = 33/253 (13%)

Query: 22  KVAILGAAGGIGQPL-------AMLMKINPLVSVLHLYDVVNTPGVTA---DISHMDTGA 71
           +VA+ GAAG IG  L        ML K  P++  L L ++   P + A    +  +D  A
Sbjct: 6   RVAVTGAAGQIGYSLLFRIASGDMLGKDQPVI--LQLLEI--PPALKALEGVVMELDDCA 61

Query: 72  --VVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC- 128
             ++ G +       A    D+ ++    PR PGM R DL   N  I     + + +   
Sbjct: 62  FPLLAGVVITDDPNVAFKDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAA 121

Query: 129 PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDV 188
            +  V ++ NP N+   IA    K A     +    +T LD  RA + +A   G+   D+
Sbjct: 122 RDVKVLVVGNPANTNALIAM---KNAPDLPAENFTAMTRLDHNRALSQLAAKAGVPVADI 178

Query: 189 -DVPVVGGHAGVTILPLLSQV----KPPCSFTQEETEYLTN----RIQNGGTEVVEAKAG 239
             + V G H+  T  P         KP      ++  +L +     +Q  G  ++EA+ G
Sbjct: 179 KKMTVWGNHSA-TQYPDFRHATIDGKPAAEVINDQ-AWLEDTFIPTVQKRGAAIIEAR-G 235

Query: 240 AGSATLSMAYAAV 252
           A SA  S A AA+
Sbjct: 236 ASSAA-SAANAAI 247

Length = 326

>gnl|CDD|215060 PLN00112, PLN00112, malate dehydrogenase (NADP); Provisional

 Score = 39.8 bits (93), Expect = 0.002
 Identities = 28/79 (35%), Positives = 35/79 (44%), Gaps = 10/79 (12%)

Query: 99  PRKPGMTRDDLFNINAGIV----RTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKA 154
           PR PGM R DL +IN  I     + L E +A    N  V ++ NP N+   I     K A
Sbjct: 187 PRGPGMERADLLDINGQIFAEQGKALNE-VAS--RNVKVIVVGNPCNTNALIC---LKNA 240

Query: 155 GTYDPKKLLGVTMLDVVRA 173
                K    +T LD  RA
Sbjct: 241 PNIPAKNFHALTRLDENRA 259

Length = 444

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	369
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	100.0
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	100.0
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	100.0
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	100.0
PLN00106	323	malate dehydrogenase	100.0
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	100.0
PTZ00325	321	malate dehydrogenase; Provisional	100.0
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	100.0
PRK05086	312	malate dehydrogenase; Provisional	100.0
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	100.0
KOG1495	332	consensus Lactate dehydrogenase [Energy production	100.0
PLN02602	350	lactate dehydrogenase	100.0
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	100.0
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	100.0
PRK05442	326	malate dehydrogenase; Provisional	100.0
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	100.0
PTZ00117	319	malate dehydrogenase; Provisional	100.0
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	100.0
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	100.0
PLN00112	444	malate dehydrogenase (NADP); Provisional	100.0
PTZ00082	321	L-lactate dehydrogenase; Provisional	100.0
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	100.0
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	100.0
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	100.0
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	100.0
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	100.0
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	100.0
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	100.0
PRK06223	307	malate dehydrogenase; Reviewed	100.0
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	100.0
PLN00135	309	malate dehydrogenase	100.0
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	100.0
TIGR01756	313	LDH_protist lactate dehydrogenase. This model repr	100.0
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	100.0
KOG1496	332	consensus Malate dehydrogenase [Energy production	100.0
cd05197	425	GH4_glycoside_hydrolases Glycoside Hydrases Family	100.0
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	100.0
cd05296	419	GH4_P_beta_glucosidase Glycoside Hydrolases Family	100.0
PRK15076	431	alpha-galactosidase; Provisional	100.0
PF02866	174	Ldh_1_C: lactate/malate dehydrogenase, alpha/beta	99.98
cd05298	437	GH4_GlvA_pagL_like Glycoside Hydrolases Family 4;	99.97
COG1486	442	CelF Alpha-galactosidases/6-phospho-beta-glucosida	99.96
cd05297	423	GH4_alpha_glucosidase_galactosidase Glycoside Hydr	99.96
PF02056	183	Glyco_hydro_4: Family 4 glycosyl hydrolase; InterP	99.88
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	98.89
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	98.85
COG1250	307	FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabo	98.82
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.74
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.7
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	98.65
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.56
PRK11730	715	fadB multifunctional fatty acid oxidation complex	98.56
TIGR02437	714	FadB fatty oxidation complex, alpha subunit FadB.	98.55
TIGR02441	737	fa_ox_alpha_mit fatty acid oxidation complex, alph	98.54
TIGR02440	699	FadJ fatty oxidation complex, alpha subunit FadJ.	98.51
PRK11154	708	fadJ multifunctional fatty acid oxidation complex	98.5
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	98.48
KOG2304	298	consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid t	98.47
TIGR02279	503	PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase Pa	98.4
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	98.39
PRK05808	282	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.38
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	98.35
PLN02353	473	probable UDP-glucose 6-dehydrogenase	98.32
PRK08268	507	3-hydroxy-acyl-CoA dehydrogenase; Validated	98.3
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.26
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.23
PLN02166	436	dTDP-glucose 4,6-dehydratase	98.22
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.21
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	98.18
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	98.13
PLN02545	295	3-hydroxybutyryl-CoA dehydrogenase	98.13
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	98.12
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	98.09
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	98.04
PLN02427	386	UDP-apiose/xylose synthase	98.04
PLN02650	351	dihydroflavonol-4-reductase	97.99
PLN02206	442	UDP-glucuronate decarboxylase	97.99
PLN00198	338	anthocyanidin reductase; Provisional	97.99
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	97.99
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	97.98
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	97.92
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	97.91
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	97.89
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	97.83
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	97.83
PRK12439	341	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	97.77
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	97.76
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	97.76
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	97.76
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	97.75
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	97.73
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	97.73
CHL00194	317	ycf39 Ycf39; Provisional	97.72
PLN02214	342	cinnamoyl-CoA reductase	97.72
PTZ00345	365	glycerol-3-phosphate dehydrogenase; Provisional	97.72
PRK12921	305	2-dehydropantoate 2-reductase; Provisional	97.7
PLN02778	298	3,5-epimerase/4-reductase	97.68
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	97.68
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	97.68
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	97.66
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	97.66
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	97.65
PRK14620	326	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	97.64
TIGR03376	342	glycerol3P_DH glycerol-3-phosphate dehydrogenase (	97.63
PRK15182	425	Vi polysaccharide biosynthesis protein TviB; Provi	97.63
PLN02695	370	GDP-D-mannose-3',5'-epimerase	97.61
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	97.6
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	97.59
PRK08229	341	2-dehydropantoate 2-reductase; Provisional	97.58
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	97.57
PLN02896	353	cinnamyl-alcohol dehydrogenase	97.56
PLN03209	576	translocon at the inner envelope of chloroplast su	97.55
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	97.54
PRK10675	338	UDP-galactose-4-epimerase; Provisional	97.53
PRK08269	314	3-hydroxybutyryl-CoA dehydrogenase; Validated	97.51
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	97.5
PLN02583	297	cinnamoyl-CoA reductase	97.49
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	97.48
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	97.48
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	97.43
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	97.42
PLN02572	442	UDP-sulfoquinovose synthase	97.41
PRK06249	313	2-dehydropantoate 2-reductase; Provisional	97.41
PLN02260	668	probable rhamnose biosynthetic enzyme	97.37
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	97.31
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	97.3
PLN02653	340	GDP-mannose 4,6-dehydratase	97.29
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	97.29
PLN02240	352	UDP-glucose 4-epimerase	97.27
PRK06194	287	hypothetical protein; Provisional	97.26
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	97.26
PRK14982	340	acyl-ACP reductase; Provisional	97.26
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	97.25
PRK07417	279	arogenate dehydrogenase; Reviewed	97.24
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	97.23
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.21
PRK07201	657	short chain dehydrogenase; Provisional	97.2
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	97.19
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	97.16
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.15
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	97.15
PRK07680	273	late competence protein ComER; Validated	97.15
PRK05865	854	hypothetical protein; Provisional	97.13
PF11975	232	Glyco_hydro_4C: Family 4 glycosyl hydrolase C-term	97.11
PRK08655	437	prephenate dehydrogenase; Provisional	97.09
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	97.08
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	97.08
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	97.06
COG0677	436	WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenas	97.04
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	97.03
PLN02688	266	pyrroline-5-carboxylate reductase	97.02
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	97.01
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.01
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	97.01
PRK08267	260	short chain dehydrogenase; Provisional	97.01
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	97.01
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	97.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	96.98
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.97
PRK07634	245	pyrroline-5-carboxylate reductase; Reviewed	96.97
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	96.97
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	96.96
PRK06545	359	prephenate dehydrogenase; Validated	96.94
PRK12320	699	hypothetical protein; Provisional	96.93
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	96.93
PLN02686	367	cinnamoyl-CoA reductase	96.91
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	96.9
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	96.9
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	96.89
PRK07102	243	short chain dehydrogenase; Provisional	96.88
PRK07806	248	short chain dehydrogenase; Provisional	96.88
PRK12480	330	D-lactate dehydrogenase; Provisional	96.88
PRK07326	237	short chain dehydrogenase; Provisional	96.85
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	96.84
PRK12829	264	short chain dehydrogenase; Provisional	96.83
PRK08507	275	prephenate dehydrogenase; Validated	96.83
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	96.82
PRK12828	239	short chain dehydrogenase; Provisional	96.8
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	96.8
PLN02253	280	xanthoxin dehydrogenase	96.8
PTZ00142	470	6-phosphogluconate dehydrogenase; Provisional	96.79
PRK10538	248	malonic semialdehyde reductase; Provisional	96.76
PRK08818	370	prephenate dehydrogenase; Provisional	96.74
PRK05717	255	oxidoreductase; Validated	96.73
PRK08340	259	glucose-1-dehydrogenase; Provisional	96.7
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	96.69
PRK07523	255	gluconate 5-dehydrogenase; Provisional	96.69
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	96.68
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	96.67
TIGR01746	367	Thioester-redct thioester reductase domain. It has	96.67
PRK12939	250	short chain dehydrogenase; Provisional	96.64
PRK08643	256	acetoin reductase; Validated	96.64
PRK08265	261	short chain dehydrogenase; Provisional	96.64
PRK05708	305	2-dehydropantoate 2-reductase; Provisional	96.64
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	96.63
COG1893	307	ApbA Ketopantoate reductase [Coenzyme metabolism]	96.63
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	96.63
PRK12367	245	short chain dehydrogenase; Provisional	96.61
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	96.61
PRK12491	272	pyrroline-5-carboxylate reductase; Reviewed	96.61
PRK07679	279	pyrroline-5-carboxylate reductase; Reviewed	96.6
PRK08251	248	short chain dehydrogenase; Provisional	96.6
PRK06180	277	short chain dehydrogenase; Provisional	96.6
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.59
PRK06182	273	short chain dehydrogenase; Validated	96.59
KOG2305	313	consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid t	96.59
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.59
PRK12937	245	short chain dehydrogenase; Provisional	96.56
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	96.55
PRK05875	276	short chain dehydrogenase; Provisional	96.55
PRK07067	257	sorbitol dehydrogenase; Provisional	96.55
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	96.54
PRK06928	277	pyrroline-5-carboxylate reductase; Reviewed	96.53
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	96.53
PRK06914	280	short chain dehydrogenase; Provisional	96.52
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.52
PRK06172	253	short chain dehydrogenase; Provisional	96.51
COG0287	279	TyrA Prephenate dehydrogenase [Amino acid transpor	96.51
PRK08213	259	gluconate 5-dehydrogenase; Provisional	96.51
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	96.5
PRK06482	276	short chain dehydrogenase; Provisional	96.5
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.49
PRK07774	250	short chain dehydrogenase; Provisional	96.49
PRK07024	257	short chain dehydrogenase; Provisional	96.49
PRK06181	263	short chain dehydrogenase; Provisional	96.48
PRK05866	293	short chain dehydrogenase; Provisional	96.48
PLN02256	304	arogenate dehydrogenase	96.47
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.47
PLN02996	491	fatty acyl-CoA reductase	96.47
PLN02780	320	ketoreductase/ oxidoreductase	96.46
PRK08085	254	gluconate 5-dehydrogenase; Provisional	96.46
PRK07814	263	short chain dehydrogenase; Provisional	96.45
PRK09135	249	pteridine reductase; Provisional	96.44
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.42
PRK05650	270	short chain dehydrogenase; Provisional	96.42
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.42
PRK05876	275	short chain dehydrogenase; Provisional	96.41
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	96.41
PRK06841	255	short chain dehydrogenase; Provisional	96.41
PRK07069	251	short chain dehydrogenase; Validated	96.4
PRK09291	257	short chain dehydrogenase; Provisional	96.39
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	96.39
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.38
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	96.38
PRK07832	272	short chain dehydrogenase; Provisional	96.38
PF03949	255	Malic_M: Malic enzyme, NAD binding domain; InterPr	96.35
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.35
PRK06124	256	gluconate 5-dehydrogenase; Provisional	96.34
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	96.34
PRK07890	258	short chain dehydrogenase; Provisional	96.34
PRK06179	270	short chain dehydrogenase; Provisional	96.34
PRK05884	223	short chain dehydrogenase; Provisional	96.33
COG2910	211	Putative NADH-flavin reductase [General function p	96.33
PLN02712	667	arogenate dehydrogenase	96.33
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.32
PRK06924	251	short chain dehydrogenase; Provisional	96.32
PRK07063	260	short chain dehydrogenase; Provisional	96.31
PRK06057	255	short chain dehydrogenase; Provisional	96.31
PRK08278	273	short chain dehydrogenase; Provisional	96.3
PRK06128	300	oxidoreductase; Provisional	96.3
PRK12827	249	short chain dehydrogenase; Provisional	96.28
PRK07576	264	short chain dehydrogenase; Provisional	96.27
PRK06197	306	short chain dehydrogenase; Provisional	96.27
PRK07453	322	protochlorophyllide oxidoreductase; Validated	96.26
PRK05867	253	short chain dehydrogenase; Provisional	96.26
PRK13243	333	glyoxylate reductase; Reviewed	96.26
cd05312	279	NAD_bind_1_malic_enz NAD(P) binding domain of mali	96.26
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.25
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	96.24
PRK05479	330	ketol-acid reductoisomerase; Provisional	96.24
PRK09186	256	flagellin modification protein A; Provisional	96.23
PRK15059	292	tartronate semialdehyde reductase; Provisional	96.23
PRK07478	254	short chain dehydrogenase; Provisional	96.21
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.19
PRK07574	385	formate dehydrogenase; Provisional	96.18
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	96.18
PTZ00431	260	pyrroline carboxylate reductase; Provisional	96.18
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	96.18
PRK12935	247	acetoacetyl-CoA reductase; Provisional	96.18
PRK06476	258	pyrroline-5-carboxylate reductase; Reviewed	96.17
PRK08263	275	short chain dehydrogenase; Provisional	96.17
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	96.17
PRK06138	252	short chain dehydrogenase; Provisional	96.16
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.16
PRK07856	252	short chain dehydrogenase; Provisional	96.16
PRK07904	253	short chain dehydrogenase; Provisional	96.15
PRK12746	254	short chain dehydrogenase; Provisional	96.14
PRK09242	257	tropinone reductase; Provisional	96.14
PRK05993	277	short chain dehydrogenase; Provisional	96.14
PRK06701	290	short chain dehydrogenase; Provisional	96.14
TIGR00873	467	gnd 6-phosphogluconate dehydrogenase, decarboxylat	96.14
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	96.13
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.13
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	96.13
PRK07074	257	short chain dehydrogenase; Provisional	96.12
PRK09009	235	C factor cell-cell signaling protein; Provisional	96.11
PRK06198	260	short chain dehydrogenase; Provisional	96.1
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	96.1
cd00762	254	NAD_bind_malic_enz NAD(P) binding domain of malic	96.09
PRK06196	315	oxidoreductase; Provisional	96.08
PLN02260	668	probable rhamnose biosynthetic enzyme	96.07
PRK08219	227	short chain dehydrogenase; Provisional	96.07
PRK06500	249	short chain dehydrogenase; Provisional	96.06
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	96.06
PRK08605	332	D-lactate dehydrogenase; Validated	96.06
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	96.05
PRK08589	272	short chain dehydrogenase; Validated	96.04
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.03
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.03
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	96.03
PRK05855	582	short chain dehydrogenase; Validated	96.03
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.03
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.01
TIGR02415	254	23BDH acetoin reductases. One member of this famil	95.98
PRK09134	258	short chain dehydrogenase; Provisional	95.98
PRK08291	330	ectoine utilization protein EutC; Validated	95.97
PRK07454	241	short chain dehydrogenase; Provisional	95.97
PRK08628	258	short chain dehydrogenase; Provisional	95.97
PRK08306	296	dipicolinate synthase subunit A; Reviewed	95.97
PRK06949	258	short chain dehydrogenase; Provisional	95.97
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.96
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	95.95
PRK00048	257	dihydrodipicolinate reductase; Provisional	95.95
PRK09072	263	short chain dehydrogenase; Provisional	95.94
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	95.94
PRK06398	258	aldose dehydrogenase; Validated	95.94
COG0345	266	ProC Pyrroline-5-carboxylate reductase [Amino acid	95.94
PRK08226	263	short chain dehydrogenase; Provisional	95.94
PRK14806	735	bifunctional cyclohexadienyl dehydrogenase/ 3-phos	95.93
PRK06523	260	short chain dehydrogenase; Provisional	95.91
PLN03139	386	formate dehydrogenase; Provisional	95.9
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	95.9
TIGR02371	325	ala_DH_arch alanine dehydrogenase, Archaeoglobus f	95.9
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	95.89
PRK06101	240	short chain dehydrogenase; Provisional	95.88
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	95.88
PRK12742	237	oxidoreductase; Provisional	95.87
PRK07060	245	short chain dehydrogenase; Provisional	95.86
PRK07035	252	short chain dehydrogenase; Provisional	95.86
PRK06114	254	short chain dehydrogenase; Provisional	95.84
PRK07825	273	short chain dehydrogenase; Provisional	95.84
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	95.84
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	95.83
PRK07062	265	short chain dehydrogenase; Provisional	95.83
PRK07677	252	short chain dehydrogenase; Provisional	95.83
PRK08339	263	short chain dehydrogenase; Provisional	95.82
PRK05872	296	short chain dehydrogenase; Provisional	95.81
PRK06139	330	short chain dehydrogenase; Provisional	95.78
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.78
PRK05854	313	short chain dehydrogenase; Provisional	95.77
KOG2666	481	consensus UDP-glucose/GDP-mannose dehydrogenase [C	95.77
PRK08223	287	hypothetical protein; Validated	95.77
PLN02350	493	phosphogluconate dehydrogenase (decarboxylating)	95.74
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.73
PLN00016	378	RNA-binding protein; Provisional	95.73
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	95.72
COG1712	255	Predicted dinucleotide-utilizing enzyme [General f	95.72
PRK08324	681	short chain dehydrogenase; Validated	95.71
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	95.71
PRK07577	234	short chain dehydrogenase; Provisional	95.7
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.69
PLN02928	347	oxidoreductase family protein	95.69
PRK08618	325	ornithine cyclodeaminase; Validated	95.69
PRK08277	278	D-mannonate oxidoreductase; Provisional	95.69
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	95.69
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	95.68
PRK06407	301	ornithine cyclodeaminase; Provisional	95.67
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	95.67
PRK12824	245	acetoacetyl-CoA reductase; Provisional	95.65
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	95.64
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	95.64
PRK07023	243	short chain dehydrogenase; Provisional	95.63
TIGR00465	314	ilvC ketol-acid reductoisomerase. This is the seco	95.58
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.57
PLN02712	667	arogenate dehydrogenase	95.57
PF02423	313	OCD_Mu_crystall: Ornithine cyclodeaminase/mu-cryst	95.56
PRK07109	334	short chain dehydrogenase; Provisional	95.55
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	95.54
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.54
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.53
PRK08703	239	short chain dehydrogenase; Provisional	95.53
PRK07831	262	short chain dehydrogenase; Provisional	95.53
PRK08936	261	glucose-1-dehydrogenase; Provisional	95.53
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.53
PRK07985	294	oxidoreductase; Provisional	95.53
PRK08264	238	short chain dehydrogenase; Validated	95.51
PRK07340	304	ornithine cyclodeaminase; Validated	95.51
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	95.51
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.5
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	95.49
TIGR02992	326	ectoine_eutC ectoine utilization protein EutC. Mem	95.47
PRK06125	259	short chain dehydrogenase; Provisional	95.46
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.46
PRK06141	314	ornithine cyclodeaminase; Validated	95.45
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	95.43
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	95.43
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	95.4
TIGR01692	288	HIBADH 3-hydroxyisobutyrate dehydrogenase. This en	95.38
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	95.37
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	95.35
PRK06947	248	glucose-1-dehydrogenase; Provisional	95.35
PRK05693	274	short chain dehydrogenase; Provisional	95.35
PRK13304	265	L-aspartate dehydrogenase; Reviewed	95.34
PRK07097	265	gluconate 5-dehydrogenase; Provisional	95.33
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.33
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.32
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	95.3
PRK07578	199	short chain dehydrogenase; Provisional	95.28
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	95.27
PRK03659	601	glutathione-regulated potassium-efflux system prot	95.27
PRK12743	256	oxidoreductase; Provisional	95.26
PRK06940	275	short chain dehydrogenase; Provisional	95.26
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	95.21
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	95.2
PRK12747	252	short chain dehydrogenase; Provisional	95.17
TIGR01724	341	hmd_rel H2-forming N(5),N(10)-methenyltetrahydrome	95.16
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.16
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.15
PRK07201	657	short chain dehydrogenase; Provisional	95.13
PRK08177	225	short chain dehydrogenase; Provisional	95.13
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.13
COG2344	211	AT-rich DNA-binding protein [General function pred	95.11
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.11
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.11
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	95.06
PTZ00075	476	Adenosylhomocysteinase; Provisional	95.06
PRK06123	248	short chain dehydrogenase; Provisional	95.06
PRK08862	227	short chain dehydrogenase; Provisional	95.05
PRK07589	346	ornithine cyclodeaminase; Validated	95.03
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.03
TIGR01327	525	PGDH D-3-phosphoglycerate dehydrogenase. This mode	95.02
PLN02383	344	aspartate semialdehyde dehydrogenase	95.01
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.01
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	95.0
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	94.97
PRK06953	222	short chain dehydrogenase; Provisional	94.95
PRK00421	461	murC UDP-N-acetylmuramate--L-alanine ligase; Provi	94.93
PRK06823	315	ornithine cyclodeaminase; Validated	94.93
PRK09496	453	trkA potassium transporter peripheral membrane com	94.91
TIGR01745	366	asd_gamma aspartate-semialdehyde dehydrogenase, ga	94.91
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	94.91
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	94.91
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	94.91
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.88
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	94.87
TIGR03736	244	PRTRC_ThiF PRTRC system ThiF family protein. A nov	94.87
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	94.84
PRK12744	257	short chain dehydrogenase; Provisional	94.83
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	94.83
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.82
PLN02503	605	fatty acyl-CoA reductase 2	94.81
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.78
PRK12938	246	acetyacetyl-CoA reductase; Provisional	94.78
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.78
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	94.77
PRK07775	274	short chain dehydrogenase; Provisional	94.77
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	94.77
PRK02705	459	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.76
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	94.76
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.75
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.75
PLN00203	519	glutamyl-tRNA reductase	94.7
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.69
PRK14187	294	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.69
PRK06046	326	alanine dehydrogenase; Validated	94.68
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.67
PRK13581	526	D-3-phosphoglycerate dehydrogenase; Provisional	94.66
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	94.66
PRK14169	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.65
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	94.63
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	94.6
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	94.59
PRK15116	268	sulfur acceptor protein CsdL; Provisional	94.59
PRK05599	246	hypothetical protein; Provisional	94.58
PRK14170	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.58
TIGR01082	448	murC UDP-N-acetylmuramate--alanine ligase. UDP-N-a	94.58
PRK01710	458	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.57
PRK14166	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.56
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	94.51
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	94.51
PF07991	165	IlvN: Acetohydroxy acid isomeroreductase, catalyti	94.49
PRK06199	379	ornithine cyclodeaminase; Validated	94.48
PRK06719	157	precorrin-2 dehydrogenase; Validated	94.47
PRK15438	378	erythronate-4-phosphate dehydrogenase PdxB; Provis	94.47
PRK15409	323	bifunctional glyoxylate/hydroxypyruvate reductase	94.46
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	94.46
PRK06484	520	short chain dehydrogenase; Validated	94.45
PRK06484	520	short chain dehydrogenase; Validated	94.45
PRK00257	381	erythronate-4-phosphate dehydrogenase; Validated	94.45
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	94.42
PLN02494	477	adenosylhomocysteinase	94.41
PRK14186	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.4
PRK14193	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.39
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	94.38
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	94.38
COG0771	448	MurD UDP-N-acetylmuramoylalanine-D-glutamate ligas	94.37
PRK06436	303	glycerate dehydrogenase; Provisional	94.37
cd01491	286	Ube1_repeat1 Ubiquitin activating enzyme (E1), rep	94.36
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.36
PRK06483	236	dihydromonapterin reductase; Provisional	94.36

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=3.1e-75  Score=537.12  Aligned_cols=318  Identities=70%  Similarity=1.075  Sum_probs=306.9

Q ss_pred             CCCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551           16 GGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP   95 (369)
Q Consensus        16 ~~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~   95 (369)
                      ..++..||+|+||+|+|||+++++|++++++++|.|||+..+.|++.||+|++++..+..|++..++++|+++||+|||.
T Consensus        24 ~~~~~~KVAvlGAaGGIGQPLSLLlK~np~Vs~LaLYDi~~~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~~advVvIP  103 (345)
T KOG1494|consen   24 GSQRGLKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIANTPGVAADLSHINTNSSVVGFTGADGLENALKGADVVVIP  103 (345)
T ss_pred             cccCcceEEEEecCCccCccHHHHHhcCcccceeeeeecccCCcccccccccCCCCceeccCChhHHHHHhcCCCEEEec
Confidence            46677899999999999999999999999999999999999999999999999999999998888999999999999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEechhcHHHHHH
Q 017551           96 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANT  175 (369)
Q Consensus        96 ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t~Ld~~R~~~  175 (369)
                      ||+||||||+|+||+..|+.|+++++..+.++||+|.+.++|||+|.++|+++|++++++.|+|+|+||+|+||++|+++
T Consensus       104 AGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIsNPVNstVPIaaevlKk~G~ydpkklfGVTtLDvVRA~t  183 (345)
T KOG1494|consen  104 AGVPRKPGMTRDDLFNINAGIVKTLAAAIAKCCPNALILVISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTTLDVVRANT  183 (345)
T ss_pred             CCCCCCCCCcHHHhhhcchHHHHHHHHHHHhhCccceeEeecCcccccchHHHHHHHHcCCCCccceeceehhhhhhHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhCCCC-CCCceeEEeecCCCccccccccCCCCCCCCHHHHHHHHhhhccchhhhhhhhccCCchhhHHHHHHHHH
Q 017551          176 FVAEVLGLDP-RDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKF  254 (369)
Q Consensus       176 ~la~~lgv~~-~~V~~~viG~hg~~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~s~A~a~~~l  254 (369)
                      |+++.++++| ++++++|+|+|.+.|++|++||+.+..++++++++.++.|+|.+|+||+++|+|+||+++|||||.++|
T Consensus       184 Fv~~~~~~~p~~~v~VPVIGGHaG~TIlPLlSQ~~p~~~~~~~~~~~Lt~RiQ~gGtEVV~AKaGaGSATLSMAyAga~f  263 (345)
T KOG1494|consen  184 FVAEVLNLDPAEDVDVPVIGGHAGITIIPLLSQCKPPFRFTDDEIEALTHRIQNGGTEVVKAKAGAGSATLSMAYAGAKF  263 (345)
T ss_pred             HHHHHhCCCchhcCCcceecCcCCceEeeecccCCCcccCCHHHHHHHHHHHHhCCceEEEeccCCCchhhhHHHHHHHH
Confidence            9999999999 559999999999999999999999998999999999999999999999999999999999999999999


Q ss_pred             HHHHHhccCCCCceeEEEeecCCCCCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHHHHhhhhhccccc
Q 017551          255 ADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWLGESEERVSWKH  334 (369)
Q Consensus       255 i~ai~~~~~~~~~v~~~~~~~g~~~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~l~~~~~~~~~~~  334 (369)
                      +++++++.++++.+..|+|+.+...+-.||++|+++|++|++++..+++|+++|+++|+.+.    ++|+++       |
T Consensus       264 a~s~lrgl~G~~~v~ecafV~s~~~~~~fFaspv~Lg~~Gv~~v~~l~~lsd~E~~~l~~~~----~eLk~s-------I  332 (345)
T KOG1494|consen  264 ADSLLRGLNGDEDVVECAFVASPVTELPFFATPVTLGKKGVEEVLGLGKLSDYEEKALEAAK----PELKKS-------I  332 (345)
T ss_pred             HHHHHHHhCCCCCeEEEeEEeccccCccceeceEEecCCceeeecCCCccCHHHHHHHHHHH----HHHHHH-------H
Confidence            99999999998889999999888778899999999999999999999999999999999887    999999       9


Q ss_pred             ccchHhHHHh
Q 017551          335 SKGHLLQQEM  344 (369)
Q Consensus       335 ~~~~~~~~~~  344 (369)
                      +||+.|++..
T Consensus       333 ~KGv~F~~~~  342 (345)
T KOG1494|consen  333 EKGVTFVKST  342 (345)
T ss_pred             HhhHHHHhhh
Confidence            9999999864

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=100.00  E-value=2.2e-68  Score=515.78  Aligned_cols=310  Identities=58%  Similarity=0.927  Sum_probs=279.4

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCCCC
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRK  101 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p~k  101 (369)
                      ||+||||+|+||+++++.|+.+++++||+|+|++++.|+++||+|......+..+++.+|++++++|||+||+++|.||+
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~DL~~~~~~~~i~~~~~~~~~~~~~~daDivvitaG~~~~   80 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAADLSHIPTAASVKGFSGEEGLENALKGADVVVIPAGVPRK   80 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEchhhcCCcCceEEEecCCCchHHHcCCCCEEEEeCCCCCC
Confidence            79999999999999999999999999999999998889999999977434555433233567899999999999999999


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEechhcHHHHHHHHHHHh
Q 017551          102 PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVL  181 (369)
Q Consensus       102 ~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t~Ld~~R~~~~la~~l  181 (369)
                      |||+|++++..|++++++++++|.+++|+++++++|||+|++++++++++++.++||++||||+|+||++||+++||+++
T Consensus        81 ~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvsNPvDv~~~i~t~~~~~~sg~p~~rViG~g~LDsaR~r~~la~~l  160 (312)
T TIGR01772        81 PGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVITNPVNSTVPIAAEVLKKKGVYDPNKLFGVTTLDIVRANTFVAELK  160 (312)
T ss_pred             CCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEecCchhhHHHHHHHHHHHhcCCChHHEEeeecchHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999998899999999999999


Q ss_pred             CCCCCCCceeEEeecCCCccccccccCCCCCCCCHHHHHHHHhhhccchhhhhhhhccCCchhhHHHHHHHHHHHHHHhc
Q 017551          182 GLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRG  261 (369)
Q Consensus       182 gv~~~~V~~~viG~hg~~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~s~A~a~~~li~ai~~~  261 (369)
                      |++|++|+++||||||+.+++|+||+++....+++++++++.++++++|++|++.|.|+|+++||+|.++++++++|+++
T Consensus       161 ~v~~~~v~~~ViGeHg~~s~vp~~S~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k~gkg~t~~~ia~a~~~iv~ail~~  240 (312)
T TIGR01772       161 GKDPMEVNVPVIGGHSGETIIPLISQCPGKVLFTEDQLEALIHRIQNAGTEVVKAKAGAGSATLSMAFAGARFVLSLVRG  240 (312)
T ss_pred             CCCHHHeEEEEEEecCCCccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCccCCCChhHHHHHHHHHHHHHHHHh
Confidence            99999999999999987689999999986444566678999999999999999987688999999999999999999986


Q ss_pred             cCCCCceeEEEeecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHHHHhhhhhcccccccchHh
Q 017551          262 LRGDAGVVECAFVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWLGESEERVSWKHSKGHLL  340 (369)
Q Consensus       262 ~~~~~~v~~~~~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~l~~~~~~~~~~~~~~~~~  340 (369)
                      ..+++.++++++++|+| .+++|||+||++|++|+++++++++|+++|+++|++++    +.+++.       +++|+.|
T Consensus       241 ~~d~~~v~~~s~~~g~yg~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~~~l~~S~----~~i~~~-------~~~g~~~  309 (312)
T TIGR01772       241 LKGEEGVVECAYVESDGVTEATFFATPLLLGKNGVEKRLGIGKLSSFEEKMLNGAL----PELKKN-------IKKGEEF  309 (312)
T ss_pred             hCCCccEEEEEEEccCCCcCceEEEEEEEEcCCeeEEEEccCCCCHHHHHHHHHHH----HHHHHH-------HHHHHHH
Confidence            55556799988999998 78999999999999999999985489999999999999    444555       5677777


Q ss_pred             HH
Q 017551          341 QQ  342 (369)
Q Consensus       341 ~~  342 (369)
                      ++
T Consensus       310 ~~  311 (312)
T TIGR01772       310 VA  311 (312)
T ss_pred             hc
Confidence            65

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=100.00  E-value=9.5e-68  Score=510.55  Aligned_cols=299  Identities=68%  Similarity=1.068  Sum_probs=272.1

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  100 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p~  100 (369)
                      |||+||||+|+||+++++.|+.+++.+||+|+|++.+.|+++||+|+.....++.+.+++|++++++|||+||++||.||
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~a~g~alDL~~~~~~~~i~~~~~~~~~y~~~~daDivvitaG~~~   80 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVAADLSHINTPAKVTGYLGPEELKKALKGADVVVIPAGVPR   80 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCccceeehHhHhCCCcceEEEecCCCchHHhcCCCCEEEEeCCCCC
Confidence            69999999999999999999999999999999998678999999998754566653234567799999999999999999


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEechhcHHHHHHHHHHH
Q 017551          101 KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEV  180 (369)
Q Consensus       101 k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t~Ld~~R~~~~la~~  180 (369)
                      +|||+|+|++..|+++++++++.|.+++|++|++++|||+|++++++++++++.+++|++||||+|+||++|++++||++
T Consensus        81 k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtNPvDv~~~i~t~~~~~~s~~p~~rviG~~~LDs~R~~~~la~~  160 (310)
T cd01337          81 KPGMTRDDLFNINAGIVRDLATAVAKACPKALILIISNPVNSTVPIAAEVLKKAGVYDPKRLFGVTTLDVVRANTFVAEL  160 (310)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCchhhHHHHHHHHHHHhcCCCHHHEEeeechHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999989999999999999


Q ss_pred             hCCCCCCCceeEEeec-CCCccccccccCCCCCCCCHHHHHHHHhhhccchhhhhhhhccCCchhhHHHHHHHHHHHHHH
Q 017551          181 LGLDPRDVDVPVVGGH-AGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACL  259 (369)
Q Consensus       181 lgv~~~~V~~~viG~h-g~~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~s~A~a~~~li~ai~  259 (369)
                      +|+++++|+++||||| |+ +++|+||++.+..++++++++++.++++++|++|++.|.|+|+|+||+|.++++++++|+
T Consensus       161 l~v~~~~V~~~v~GeHsGd-s~vp~~S~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k~gkg~t~~~~a~a~~~iv~aIl  239 (310)
T cd01337         161 LGLDPAKVNVPVIGGHSGV-TILPLLSQCQPPFTFDQEEIEALTHRIQFGGDEVVKAKAGAGSATLSMAYAGARFANSLL  239 (310)
T ss_pred             hCcCHHHEEEEEEecCCCC-ceecccccccccccCCHHHHHHHHHHHHHHHHHHHhCccCCCCcchhHHHHHHHHHHHHH
Confidence            9999999999999999 77 999999999875456666689999999999999999877889999999999999999999


Q ss_pred             hccCCCCceeEEEeecCCCCCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHH
Q 017551          260 RGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQ  320 (369)
Q Consensus       260 ~~~~~~~~v~~~~~~~g~~~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~  320 (369)
                      ++.++++.+++|++++|+-.+++|+|+||++|++|+++++++++|+++|+++|++++..|+
T Consensus       240 ~~~~~~~~~~~~s~~~~~g~~~v~~s~P~~ig~~Gv~~i~~l~~L~~~E~~~l~~S~~~i~  300 (310)
T cd01337         240 RGLKGEKGVIECAYVESDVTEAPFFATPVELGKNGVEKNLGLGKLNDYEKKLLEAALPELK  300 (310)
T ss_pred             HhcCCCcceEEEEEEeccCCCceEEEEEEEEeCCeEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence            8866666688888777653578999999999999999999853599999999999995443

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=100.00  E-value=4.2e-66  Score=494.74  Aligned_cols=290  Identities=37%  Similarity=0.555  Sum_probs=260.9

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCC--CeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG--AVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~--~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      +||+|||| |+||+++++.|.++++.+||+|||+++  ++|.++||+|+.+.  ...+... +.+ +++++|||+||++|
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~-~~~-y~~~~~aDiVvitA   77 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITG-DGD-YEDLKGADIVVITA   77 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEec-CCC-hhhhcCCCEEEEeC
Confidence            59999999 999999999998888888999999996  79999999999853  3344332 245 47899999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHHHH
Q 017551           97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANT  175 (369)
Q Consensus        97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~~~  175 (369)
                      |.||||||+|+||+..|++|++++++++.++|||++++++|||+|++||++    ++.+++|++|+||. |.||++||++
T Consensus        78 G~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvtNPvD~~ty~~----~k~sg~p~~rvig~gt~LDsaR~~~  153 (313)
T COG0039          78 GVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVTNPVDILTYIA----MKFSGFPKNRVIGSGTVLDSARFRT  153 (313)
T ss_pred             CCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEecCcHHHHHHHH----HHhcCCCccceecccchHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999876    88999999999999 8999999999


Q ss_pred             HHHHHhCCCCCCCceeEEeecCCCccccccccCCCCC----C----CCHHHHHHHHhhhccchhhhhhhhccCCchhhHH
Q 017551          176 FVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----S----FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSM  247 (369)
Q Consensus       176 ~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~----~----~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~s~  247 (369)
                      +||+++|++|++|+++|+|+||+ +++|+||++++.+    +    .++++++++.++|+++|+||+++| |.| ++||+
T Consensus       154 ~lae~~~v~~~~V~~~ViGeHGd-t~vp~~S~a~v~G~pl~~~~~~~~~~~~~~i~~~v~~~g~eII~~k-G~~-t~~~~  230 (313)
T COG0039         154 FLAEKLGVSPKDVHAYVIGEHGD-TMVPLWSQATVGGKPLEELLKEDTEEDLEELIERVRNAGAEIIEAK-GAG-TYYGP  230 (313)
T ss_pred             HHHHHhCCChhHceeeEeccCCC-ceEEeeeeeeECCEEHHHHhhcccHhHHHHHHHHHHhhHHHHHHcc-Ccc-chhhH
Confidence            99999999999999999999999 9999999999854    1    234577899999999999999988 555 99999


Q ss_pred             HHHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHHHH
Q 017551          248 AYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWLG  324 (369)
Q Consensus       248 A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~l~  324 (369)
                      |.++++++++|++|.+   .+++++ |++|+| ++++||++|+++|++|+++++++ +|+++|+++|+.++..++..++
T Consensus       231 A~a~a~~~~ail~d~~---~vl~~s~~l~G~yg~~dv~~gvP~~lg~~Gv~~iie~-~l~~~E~~~l~~s~~~lk~~i~  305 (313)
T COG0039         231 AAALARMVEAILRDEK---RVLPVSVYLDGEYGVEDVYFGVPAVLGKNGVEEILEL-LLSDDEQEKLDKSAEELKKNIE  305 (313)
T ss_pred             HHHHHHHHHHHHcCCC---ceEEEEEeecCccCcCCeEEEeeEEEcCCCcEEEecC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999874   478775 899999 89999999999999999999996 9999999999999954444443

>PLN00106 malate dehydrogenase

Probab=100.00  E-value=3.2e-64  Score=488.57  Aligned_cols=314  Identities=77%  Similarity=1.174  Sum_probs=284.7

Q ss_pred             hhhcccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCC
Q 017551           10 AKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGM   89 (369)
Q Consensus        10 ~~~~~~~~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~A   89 (369)
                      +.|+..++.++.||+||||+|+||+++++.|+++++.+||+|+|++++.++++||.|+.....+..+++++|++++++||
T Consensus         8 ~~~~~~~~~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~a   87 (323)
T PLN00106          8 RACRAKGGAPGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGA   87 (323)
T ss_pred             hccccccCCCCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCC
Confidence            55666667788899999999999999999999999999999999998889999999988655666545577888999999


Q ss_pred             cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEechhc
Q 017551           90 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLD  169 (369)
Q Consensus        90 DiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t~Ld  169 (369)
                      |+||++||.|++||++|++++..|+++++++++++.+++|+++++++|||+|.+++++++++++.+++||+|+||+|.||
T Consensus        88 DiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~p~~~viG~~~LD  167 (323)
T PLN00106         88 DLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTTLD  167 (323)
T ss_pred             CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCCCCcceEEEEecch
Confidence            99999999999999999999999999999999999999999999999999998777777788999999999999998899


Q ss_pred             HHHHHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCCCCCHHHHHHHHhhhccchhhhhhhhccCCchhhHHHH
Q 017551          170 VVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAY  249 (369)
Q Consensus       170 ~~R~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~s~A~  249 (369)
                      +.|+++++|+++|+++.+|+++|+||||+.+++|+||++++..++++++++++.++++++|++|++.|.|+|+++||+|.
T Consensus       168 s~Rl~~~lA~~lgv~~~~V~~~ViGeHg~~s~vp~~S~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k~~kg~t~~~~a~  247 (323)
T PLN00106        168 VVRANTFVAEKKGLDPADVDVPVVGGHAGITILPLLSQATPKVSFTDEEIEALTKRIQNGGTEVVEAKAGAGSATLSMAY  247 (323)
T ss_pred             HHHHHHHHHHHhCCChhheEEEEEEeCCCccEeeehhcceecccCCHHHHHHHHHHHHHHHHHHHhCccCCCCchHHHHH
Confidence            99999999999999999999999999976689999999976544666679999999999999999976578999999999


Q ss_pred             HHHHHHHHHHhccCCCCceeEEEeecCCCCCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 017551          250 AAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWL  323 (369)
Q Consensus       250 a~~~li~ai~~~~~~~~~v~~~~~~~g~~~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~l  323 (369)
                      ++++++++|++++++++.+++|++++++|.+++|||+||+||++|+++++++++|+++|+++|+.++..|++.+
T Consensus       248 a~~~ii~ail~~~~~~~~v~~~s~~~~~~~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~~~l~~S~~~i~~~~  321 (323)
T PLN00106        248 AAARFADACLRGLNGEADVVECSYVQSEVTELPFFASKVRLGRNGVEEVLGLGPLSEYEQKGLEALKPELKASI  321 (323)
T ss_pred             HHHHHHHHHHhccCCCceEEEEEEECcccCCceEEEEEEEEcCCeeEEEcCCCCCCHHHHHHHHHHHHHHHHHh
Confidence            99999999999887776799999888776444999999999999999999965999999999999997666544

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=100.00  E-value=5.3e-63  Score=478.03  Aligned_cols=284  Identities=25%  Similarity=0.377  Sum_probs=256.3

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC-C--CeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-G--AVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~-~--~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      ||+|||| |+||+++|+.|+.+++++||+|+|+++  ++|+++||+|... .  ..++.++  +|+ ++++|||+||++|
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~--~~y-~~~~~aDivvita   76 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRA--GDY-DDCADADIIVITA   76 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEE--CCH-HHhCCCCEEEECC
Confidence            8999999 999999999999999999999999987  7899999999763 2  2456553  454 7899999999999


Q ss_pred             CCCCCCCCC--HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHH
Q 017551           97 GVPRKPGMT--RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA  173 (369)
Q Consensus        97 g~p~k~g~~--r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~  173 (369)
                      |.||+|||+  |+|++..|+++++++++.+.+++|+++++++|||+|++|+++    ++.++||++||||+ |.||++||
T Consensus        77 G~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvsNPvDv~t~~~----~k~sg~p~~rviG~gt~LDs~R~  152 (307)
T cd05290          77 GPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILITNPLDIAVYIA----ATEFDYPANKVIGTGTMLDTARL  152 (307)
T ss_pred             CCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCcHHHHHHHH----HHHhCcChhheecccchHHHHHH
Confidence            999999999  699999999999999999999999999999999999999776    78899999999999 89999999


Q ss_pred             HHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCCC----------CCHHHHHHHHhhhccchhhhhhhhccCCch
Q 017551          174 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCS----------FTQEETEYLTNRIQNGGTEVVEAKAGAGSA  243 (369)
Q Consensus       174 ~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~~----------~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~  243 (369)
                      ++++|+++|++|++|+++||||||+ +++|+||++++.+.          ..+.+++++.++++++|++|++.   ||+|
T Consensus       153 ~~~la~~l~v~~~~V~~~ViGeHGd-s~vp~wS~~~v~g~~l~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~---KG~t  228 (307)
T cd05290         153 RRIVADKYGVDPKNVTGYVLGEHGS-HAFPVWSLVNIAGLPLDELEALFGKEPIDKDELLEEVVQAAYDVFNR---KGWT  228 (307)
T ss_pred             HHHHHHHhCCCcccEEEEEEecCCC-ceEEeeeeeEECCEEHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHc---cCee
Confidence            9999999999999999999999998 99999999987531          12335789999999999999994   5899


Q ss_pred             hhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHH
Q 017551          244 TLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQD  321 (369)
Q Consensus       244 ~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~  321 (369)
                      +|++|+++++++++|++|.+   .+++++ +++|+| ++++|||+||+||++|+++++++ +|+++|+++|++++..|++
T Consensus       229 ~~~ia~a~~~ii~ail~d~~---~v~~vsv~~~G~yg~~~v~~svP~~ig~~Gv~~i~~l-~L~~~E~~~l~~s~~~i~~  304 (307)
T cd05290         229 NAGIAKSASRLIKAILLDER---SILPVCTLLSGEYGLSDVALSLPTVIGAKGIERVLEI-PLDEWELEKLHKSAKAIRE  304 (307)
T ss_pred             hHHHHHHHHHHHHHHHhCCC---eEEEEEEeeCCccCCCCEEEEEEEEEeCCCceEecCC-CCCHHHHHHHHHHHHHHHH
Confidence            99999999999999998754   477775 889999 78999999999999999999996 9999999999999965544

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PTZ00325 malate dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-62  Score=473.61  Aligned_cols=313  Identities=60%  Similarity=0.930  Sum_probs=276.7

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      .+..||+||||+|.||+++++.|+.++..+||+|+|++.+.++++||+|......+..++...+++++++|||+||+++|
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVitaG   85 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLICAG   85 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEECCC
Confidence            44569999999999999999999999999999999995589999999997754444433322444689999999999999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEechhcHHHHHHHH
Q 017551           98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFV  177 (369)
Q Consensus        98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t~Ld~~R~~~~l  177 (369)
                      .|+++|++|.+++..|++++++++++|.+++|+++++++|||+|++++++.+.+++.+++||+|+||+++||++||+++|
T Consensus        86 ~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~viG~g~LDs~R~r~~l  165 (321)
T PTZ00325         86 VPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRKLFGVTTLDVVRARKFV  165 (321)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChhheeechhHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999987555678999999999999889999999999


Q ss_pred             HHHhCCCCCCCceeEEeecCCCccccccccCCCCCCCCHHHHHHHHhhhccchhhhhhhhccCCchhhHHHHHHHHHHHH
Q 017551          178 AEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADA  257 (369)
Q Consensus       178 a~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~s~A~a~~~li~a  257 (369)
                      |+++|++|++|+++||||||+.+++|+||++..  ++++++++++.++++++|++|++.|.|||+|+|++|+++++++++
T Consensus       166 a~~l~v~~~~V~~~VlGeHGd~s~v~~~S~~g~--~l~~~~~~~i~~~v~~~g~~Ii~~k~~kg~t~~g~a~a~~~i~~a  243 (321)
T PTZ00325        166 AEALGMNPYDVNVPVVGGHSGVTIVPLLSQTGL--SLPEEQVEQITHRVQVGGDEVVKAKEGAGSATLSMAYAAAEWSTS  243 (321)
T ss_pred             HHHhCcChhheEEEEEeecCCcccccchhccCC--CCCHHHHHHHHHHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHH
Confidence            999999999999999999998459999999943  466777999999999999999998767899999999999999999


Q ss_pred             HHhccCCCCceeEEEeecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHHHHhhhhhccccccc
Q 017551          258 CLRGLRGDAGVVECAFVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWLGESEERVSWKHSK  336 (369)
Q Consensus       258 i~~~~~~~~~v~~~~~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~l~~~~~~~~~~~~~  336 (369)
                      |+++.++++.++++++++|+| .+++|+|+||+||++|+++++++++|+++|+++|+++++    .+++.       +++
T Consensus       244 il~~~~~~~~v~~~~~~~g~yg~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~~~l~~S~~----~i~~~-------~~~  312 (321)
T PTZ00325        244 VLKALRGDKGIVECAFVESDMRPECPFFSSPVELGKEGVERVLPIGPLNAYEEELLEAAVP----DLKKN-------IEK  312 (321)
T ss_pred             HHhhcCCCCCeEEEEEEecCCCCCCeEEEEEEEEcCCeeEEEcCCCCCCHHHHHHHHHHHH----HHHHH-------HHH
Confidence            998855556688889999999 689999999999999999999834999999999999994    44444       556


Q ss_pred             chHhHHH
Q 017551          337 GHLLQQE  343 (369)
Q Consensus       337 ~~~~~~~  343 (369)
                      |+.|++.
T Consensus       313 ~~~~~~~  319 (321)
T PTZ00325        313 GLEFARK  319 (321)
T ss_pred             HHHHHhc
Confidence            6777654

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=100.00  E-value=3.4e-62  Score=473.60  Aligned_cols=290  Identities=23%  Similarity=0.320  Sum_probs=259.0

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC-CCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~-~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      .+||+|||| |.||+++++.|+..++.+||+|||+++  +.|+++||+|+.. ....+.. .++|+ ++++|||+||+++
T Consensus         3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~-~~~dy-~~~~~adivvita   79 (312)
T cd05293           3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIE-ADKDY-SVTANSKVVIVTA   79 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEE-ECCCH-HHhCCCCEEEECC
Confidence            469999998 999999999999999999999999987  7899999999873 2212332 24676 5799999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHHHH
Q 017551           97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANT  175 (369)
Q Consensus        97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~~~  175 (369)
                      |.|++|||+|+|++.+|+++++++++.|+++||++|++++|||+|++++++    ++++++|++||||+ |.||+.|+++
T Consensus        80 G~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsNP~d~~t~~~----~k~sg~p~~~viG~gt~Ld~~R~~~  155 (312)
T cd05293          80 GARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVSNPVDIMTYVA----WKLSGLPKHRVIGSGCNLDSARFRY  155 (312)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEccChHHHHHHHH----HHHhCCCHHHEEecCchHHHHHHHH
Confidence            999999999999999999999999999999999999999999999998654    78889999999999 9999999999


Q ss_pred             HHHHHhCCCCCCCceeEEeecCCCccccccccCCCCCC------------CCHHHHHHHHhhhccchhhhhhhhccCCch
Q 017551          176 FVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCS------------FTQEETEYLTNRIQNGGTEVVEAKAGAGSA  243 (369)
Q Consensus       176 ~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~~------------~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~  243 (369)
                      ++|+++|+++++|+++||||||+ +++|+||++++.+.            .++++++++.++++++|++|++.   ||+|
T Consensus       156 ~la~~l~v~~~~v~~~v~GeHG~-s~vp~~S~~~i~g~~l~~~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~---kg~t  231 (312)
T cd05293         156 LIAERLGVAPSSVHGWIIGEHGD-SSVPVWSGVNVAGVRLQDLNPDIGTDKDPEKWKEVHKQVVDSAYEVIKL---KGYT  231 (312)
T ss_pred             HHHHHhCCChhhEEEEEeecCCC-CccccceeceECCEEHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHh---cCCc
Confidence            99999999999999999999998 99999999988531            22345889999999999999984   5899


Q ss_pred             hhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC--CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHH
Q 017551          244 TLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQ  320 (369)
Q Consensus       244 ~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~  320 (369)
                      +|++|+++++++++|+++.+   .+++++ +++|.|  +++++||+||+||++|+++++++ +|+++|+++|++++..|+
T Consensus       232 ~~~~a~a~~~ii~ail~d~~---~~~~vsv~~~g~yg~~~d~~~svP~~ig~~Gi~~i~~l-~L~~~E~~~l~~s~~~i~  307 (312)
T cd05293         232 SWAIGLSVADLVDAILRNTG---RVHSVSTLVKGLHGIEDEVFLSLPCILGENGITHVIKQ-PLTEEEQEKLQKSADTLW  307 (312)
T ss_pred             hHHHHHHHHHHHHHHHcCCC---eEEEEEEEeCCccCCCCCeEEEEeEEEeCCceEEEecC-CCCHHHHHHHHHHHHHHH
Confidence            99999999999999998865   367665 889988  58999999999999999999995 999999999999997666


Q ss_pred             HHHH
Q 017551          321 DWLG  324 (369)
Q Consensus       321 ~~l~  324 (369)
                      +.++
T Consensus       308 ~~~~  311 (312)
T cd05293         308 EVQK  311 (312)
T ss_pred             HHhh
Confidence            5543

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05086 malate dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-62  Score=471.96  Aligned_cols=309  Identities=55%  Similarity=0.862  Sum_probs=273.5

Q ss_pred             CEEEEEcCCCccHHHHHHHHHh-CCCCcEEEEEeCCC-chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKI-NPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~-~~~~~el~L~D~~~-~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      |||+||||+|.+|+++++.+.. .+...+|+|+|+++ ..++++|+.|......+..+ ..+|++++++|+|+||+++|.
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~~-~~~d~~~~l~~~DiVIitaG~   79 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF-SGEDPTPALEGADVVLISAGV   79 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEEe-CCCCHHHHcCCCCEEEEcCCC
Confidence            6999999999999999999866 56778999999977 67788999985422344432 145777899999999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEechhcHHHHHHHHH
Q 017551           99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVA  178 (369)
Q Consensus        99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t~Ld~~R~~~~la  178 (369)
                      |+++|++|.+++..|++++++++++|++++|+++++++|||+|+||+++++++++.+++|++||||+|+||++|++++||
T Consensus        80 ~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsNP~D~~t~~~~~~~~~~sg~p~~rvig~~~Lds~R~~~~ia  159 (312)
T PRK05086         80 ARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDVIRSETFVA  159 (312)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCchHHHHHHHHHHHHHhcCCCHHHEEeeecHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhCCCCCCCceeEEeecCCCccccccccCCCCCCCCHHHHHHHHhhhccchhhhhhhhccCCchhhHHHHHHHHHHHHH
Q 017551          179 EVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADAC  258 (369)
Q Consensus       179 ~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~s~A~a~~~li~ai  258 (369)
                      +++|++|++|+++||||||+.+++|+||++ .+.++++++++++.+++++++++|++.|.|+|+|+||+|.++++++++|
T Consensus       160 ~~l~~~~~~v~~~v~GeHg~~s~~p~~S~~-~g~~l~~~~~~~i~~~v~~~g~~ii~~k~~~g~t~~~~a~a~~~~v~ai  238 (312)
T PRK05086        160 ELKGKQPGEVEVPVIGGHSGVTILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSL  238 (312)
T ss_pred             HHhCCChhheEEEEEEecCCCceecccccc-CCccCCHHHHHHHHHHHHHHHHHHHhcccCCCCchhhHHHHHHHHHHHH
Confidence            999999999999999999776899999999 3335667779999999999999999987778999999999999999999


Q ss_pred             HhccCCCCceeEEEeecCCCCCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHHHHhhhhhcccccccch
Q 017551          259 LRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWLGESEERVSWKHSKGH  338 (369)
Q Consensus       259 ~~~~~~~~~v~~~~~~~g~~~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~l~~~~~~~~~~~~~~~  338 (369)
                      ++++++++.++++++++|+-.+++|||+||+||++|+++++++++|+++|+++|++++    +.+++.       +++|.
T Consensus       239 ~~~~~~~~~v~~~~~~~~~g~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~~~l~~s~----~~i~~~-------~~~g~  307 (312)
T PRK05086        239 VRALQGEQGVVECAYVEGDGKYARFFAQPVLLGKNGVEERLPIGTLSAFEQNALEGML----DTLKKD-------IALGE  307 (312)
T ss_pred             HhcCCCCCcEEEEEEEeccCCcceEEEEEEEEcCCeeEEEcCCCCCCHHHHHHHHHHH----HHHHHH-------HHHHH
Confidence            9987666678898887775346899999999999999999996699999999999999    444444       66666


Q ss_pred             HhHH
Q 017551          339 LLQQ  342 (369)
Q Consensus       339 ~~~~  342 (369)
                      .|.+
T Consensus       308 ~~~~  311 (312)
T PRK05086        308 EFVN  311 (312)
T ss_pred             Hhhc
Confidence            6654

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=100.00  E-value=6.7e-62  Score=472.89  Aligned_cols=293  Identities=27%  Similarity=0.370  Sum_probs=257.9

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCc-----EEEEEeCCC----chhHHHHhhcccC--CCeEEEEeCCCChhhhc
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDT--GAVVRGFLGQPQLENAL   86 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~-----el~L~D~~~----~~g~~~dL~~~~~--~~~v~~~~~t~dl~~al   86 (369)
                      +++.||+||||+|+||+++++.|+.+++++     ||+|+|+++    ++|+++||+|+.+  ...++..  .++ ++++
T Consensus         1 ~~p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~--~~~-~~~~   77 (323)
T TIGR01759         1 KKPVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVAT--TDP-EEAF   77 (323)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEe--cCh-HHHh
Confidence            468899999988999999999999999999     999999964    6899999999873  1233332  234 5899


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCChhHHHHHHHHHhC-CCCCCcEEE
Q 017551           87 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAG-TYDPKKLLG  164 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~i~ae~~~~~~-~~~~~kviG  164 (369)
                      +|||+||++||.||+|||+|++++..|++++++++++|.++|| +++++++|||+|++|+++    ++.+ +||++||||
T Consensus        78 ~daDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~----~k~s~g~p~~rViG  153 (323)
T TIGR01759        78 KDVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVGNPANTNALIA----SKNAPDIPPKNFSA  153 (323)
T ss_pred             CCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHH----HHHcCCCCHHHEEE
Confidence            9999999999999999999999999999999999999999998 999999999999999876    6788 999999999


Q ss_pred             echhcHHHHHHHHHHHhCCCCCCCc-eeEEeecCCCccccccccCCCCC----C-CCHHH--HHHHHhhhccchhhhhhh
Q 017551          165 VTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHAGVTILPLLSQVKPPC----S-FTQEE--TEYLTNRIQNGGTEVVEA  236 (369)
Q Consensus       165 ~t~Ld~~R~~~~la~~lgv~~~~V~-~~viG~hg~~~~vp~~S~~~~~~----~-~~~~~--~~~l~~~v~~~~~ev~~~  236 (369)
                      +|.||++|||++||+++|++|++|+ .+||||||+ +++|+||++++.+    + ++++.  ++++.+++++++++|++.
T Consensus       154 ~t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~-s~v~~~S~~~v~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~  232 (323)
T TIGR01759       154 MTRLDHNRAKYQLAAKAGVPVSDVKNVIIWGNHSN-TQVPDFTHATVDGRPVKEVIKDDKWLEGEFIPTVQQRGAAVIEA  232 (323)
T ss_pred             eeHHHHHHHHHHHHHHhCcChHHeEEeEEEecCCC-ceeeccccCEECCccHHHHhcchhhHHHHHHHHHHhhHHHHHhc
Confidence            9999999999999999999999995 679999998 9999999998753    1 23333  678999999999999995


Q ss_pred             hccCCchhh-HHHHHHHHHHHHHHhccCCCCceeEEE-eecC-CC--CCccEEEEEEEEcCCCeEEEcc-CCCCCHHHHH
Q 017551          237 KAGAGSATL-SMAYAAVKFADACLRGLRGDAGVVECA-FVAS-QV--TELPFFASKVRLGRQGAEEIFQ-LGPLNEYESG  310 (369)
Q Consensus       237 k~g~g~~~~-s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g-~~--~~~~~~svPv~lg~~Gv~~~~~-~~~L~~~E~~  310 (369)
                         ||+++| ++|.++++++++|++|.+. +.+++|+ +++| +|  ++++|||+||++|++|++++++ + +|+++|++
T Consensus       233 ---kG~t~~~~~a~a~~~iv~ail~~~~~-~~v~~~s~~~~g~~Yg~~~~v~~s~P~~lg~~Gv~~iv~~l-~L~~~E~~  307 (323)
T TIGR01759       233 ---RGASSAASAANAAIDHVRDWVTGTPE-GDWVSMGVYSDGNPYGIPEGIIFSFPVTCKGDGEWEIVEGL-PLDDFVRG  307 (323)
T ss_pred             ---cCCcchHHHHHHHHHHHHHHHcCCCC-CcEEEEEEEeCCcccCCCCCeEEEEEEEEcCCeeEEEcCCC-CCCHHHHH
Confidence               578888 5889999999999999732 2488887 8899 88  5899999999999999999998 6 99999999


Q ss_pred             HHHHHHHHHHHHH
Q 017551          311 LFCLLHLCFQDWL  323 (369)
Q Consensus       311 ~L~~~~~~i~~~l  323 (369)
                      +|+.+++.++...
T Consensus       308 ~l~~sa~~lk~~~  320 (323)
T TIGR01759       308 KLDATEDELLEEK  320 (323)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999996554443

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>KOG1495 consensus Lactate dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=1.6e-61  Score=444.23  Aligned_cols=286  Identities=22%  Similarity=0.346  Sum_probs=262.3

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC---CCeEEEEeCCCChhhhcCCCcE
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT---GAVVRGFLGQPQLENALTGMDL   91 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~---~~~v~~~~~t~dl~~al~~ADi   91 (369)
                      ..+..||+|+|+ |.+|++++..+..+++.+||+|+|+++  ++|++|||+|...   .+++..   .+|+ .+.+++++
T Consensus        17 ~~~~~KItVVG~-G~VGmAca~siL~k~Ladel~lvDv~~dklkGE~MDLqH~s~f~~~~~V~~---~~Dy-~~sa~S~l   91 (332)
T KOG1495|consen   17 EFKHNKITVVGV-GQVGMACAISILLKGLADELVLVDVNEDKLKGEMMDLQHGSAFLSTPNVVA---SKDY-SVSANSKL   91 (332)
T ss_pred             cccCceEEEEcc-chHHHHHHHHHHHhhhhhceEEEecCcchhhhhhhhhccccccccCCceEe---cCcc-cccCCCcE
Confidence            344679999999 999999999999999999999999998  8999999999873   345543   4575 67899999


Q ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcH
Q 017551           92 VIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDV  170 (369)
Q Consensus        92 Vii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~  170 (369)
                      ||+|||..+++|++|++++++|+.+++.+.+++.+|.||++++++|||+|++||++    ||.+|||.+||||. |+||+
T Consensus        92 vIiTAGarq~~gesRL~lvQrNV~ifK~iip~lv~ySpd~~llvvSNPVDilTYv~----wKLSgfP~nRViGsGcnLDs  167 (332)
T KOG1495|consen   92 VIITAGARQSEGESRLDLVQRNVDIFKAIIPALVKYSPDCILLVVSNPVDILTYVT----WKLSGFPKNRVIGSGCNLDS  167 (332)
T ss_pred             EEEecCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecCchHHHHHHH----HHHcCCcccceeccCcCccH
Confidence            99999999999999999999999999999999999999999999999999999865    99999999999999 99999


Q ss_pred             HHHHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCC------------CCCHHHHHHHHhhhccchhhhhhhhc
Q 017551          171 VRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC------------SFTQEETEYLTNRIQNGGTEVVEAKA  238 (369)
Q Consensus       171 ~R~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~------------~~~~~~~~~l~~~v~~~~~ev~~~k~  238 (369)
                      +|||++++++||++|+++++||+||||+ +.+|+||...+.+            ..+++.|+++.+++.+.++||++.| 
T Consensus       168 aRFryLi~~~Lg~~pss~hgwIiGEHGd-SsV~vWSgvniAGv~l~~l~~~~~t~~d~e~w~eihK~v~~sayeviklK-  245 (332)
T KOG1495|consen  168 ARFRYLIGNRLGVHPSSCHGWIIGEHGD-SSVPVWSGVNIAGVSLKDLNPDLGTDYDPENWKEIHKQVVDSAYEVIKLK-  245 (332)
T ss_pred             HHHHHHHHHHhCCCcccceEEEeeccCC-ccceecccccccceEHhHhChhhcCCCCHHHHHHHHHHHHHHHHHHHHhc-
Confidence            9999999999999999999999999999 8999999987632            3567789999999999999999975 


Q ss_pred             cCCchhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC--CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHH
Q 017551          239 GAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLL  315 (369)
Q Consensus       239 g~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~  315 (369)
                        |+|.|++|+++++++++|++|++.   +++++ .++|.|  .+|+|+|+||++|++|+..++.. +|+++|.++|+++
T Consensus       246 --GyTswaIglsva~l~~ail~n~~~---i~~Vst~~kg~~gI~~dVflSlPc~l~~~Gi~~vv~~-~Lt~~E~akL~kS  319 (332)
T KOG1495|consen  246 --GYTSWAIGLSVADLAQAILRNLRR---IHPVSTMVKGLYGIDDDVFLSLPCLLGANGITHVVKQ-KLTDEEVAKLKKS  319 (332)
T ss_pred             --CchHHHHHHHHHHHHHHHHhCcCc---eeeeeeccccccCCCCceEEecceeecCCchhhhhcc-cCCHHHHHHHHHH
Confidence              999999999999999999999874   77776 679988  67999999999999999999996 9999999999999


Q ss_pred             HHHH
Q 017551          316 HLCF  319 (369)
Q Consensus       316 ~~~i  319 (369)
                      ++.+
T Consensus       320 a~tl  323 (332)
T KOG1495|consen  320 AKTL  323 (332)
T ss_pred             HHHH
Confidence            9544

>PLN02602 lactate dehydrogenase

Probab=100.00  E-value=5.2e-61  Score=470.70  Aligned_cols=290  Identities=23%  Similarity=0.363  Sum_probs=259.2

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC-CCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~-~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      +||+|||| |.||+++++.|+.+++.+||+|+|+++  +.|+++||+|+.. ....++. +++|+ ++++|||+||++||
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~-~~~dy-~~~~daDiVVitAG  114 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKIL-ASTDY-AVTAGSDLCIVTAG  114 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEE-eCCCH-HHhCCCCEEEECCC
Confidence            69999998 999999999999999999999999988  7899999999863 2223433 23565 67999999999999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHHHHH
Q 017551           98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTF  176 (369)
Q Consensus        98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~~~~  176 (369)
                      .||+|||+|.|++.+|++++++++++|+++||++|++++|||+|++|+++    ++.++||++||||+ |.||++|++++
T Consensus       115 ~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvtNPvdv~t~~~----~k~sg~p~~rviG~gt~LDs~R~r~~  190 (350)
T PLN02602        115 ARQIPGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVSNPVDVLTYVA----WKLSGFPANRVIGSGTNLDSSRFRFL  190 (350)
T ss_pred             CCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCchHHHHHHH----HHHhCCCHHHEEeecchHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999765    67788999999999 68999999999


Q ss_pred             HHHHhCCCCCCCceeEEeecCCCccccccccCCCCC------------CCCHHHHHHHHhhhccchhhhhhhhccCCchh
Q 017551          177 VAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC------------SFTQEETEYLTNRIQNGGTEVVEAKAGAGSAT  244 (369)
Q Consensus       177 la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~------------~~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~  244 (369)
                      ||+++|+++++|+++||||||+ +++|+||++++.+            .+++++++++.+++++++++|++.   ||+|+
T Consensus       191 lA~~l~v~~~~V~~~ViGeHGd-s~vp~wS~~~i~G~pl~~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~---KG~t~  266 (350)
T PLN02602        191 IADHLDVNAQDVQAYIVGEHGD-SSVALWSSVSVGGVPVLSFLEKQQIAYEKETLEEIHRAVVDSAYEVIKL---KGYTS  266 (350)
T ss_pred             HHHHhCCCccceeeeEEecCCC-ceEeeeeeeeECCEEHHHHhhccCCccCHHHHHHHHHHHHHHHHHHHhc---CCccH
Confidence            9999999999999999999998 9999999997632            133455789999999999999994   58999


Q ss_pred             hHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC-C--CccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHH
Q 017551          245 LSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-T--ELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQ  320 (369)
Q Consensus       245 ~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~--~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~  320 (369)
                      |++|+++++++++|+++.+   .+++++ +++|+| .  +++|+|+||++|++|+++++++ +|+++|+++|++++..++
T Consensus       267 ~gia~a~a~ii~ail~d~~---~v~~vsv~~~g~Yg~~~~~v~~s~P~~ig~~Gi~~i~~l-~L~~~E~~~l~~sa~~l~  342 (350)
T PLN02602        267 WAIGYSVASLVRSLLRDQR---RIHPVSVLAKGFHGIDEGDVFLSLPAQLGRNGVLGVVNV-HLTDEEAERLRKSAKTLW  342 (350)
T ss_pred             HHHHHHHHHHHHHHHhcCC---CeEEEEEecccccCCCCCCcEEEEEEEEeCCeeEEEecC-CCCHHHHHHHHHHHHHHH
Confidence            9999999999999999875   488886 679998 3  7899999999999999999996 999999999999997666


Q ss_pred             HHHHh
Q 017551          321 DWLGE  325 (369)
Q Consensus       321 ~~l~~  325 (369)
                      +.+++
T Consensus       343 ~~~~~  347 (350)
T PLN02602        343 EVQSQ  347 (350)
T ss_pred             HHHHH
Confidence            65544

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=100.00  E-value=3.4e-60  Score=460.56  Aligned_cols=292  Identities=24%  Similarity=0.388  Sum_probs=261.4

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCC-CeEEEEeCCCChhhhcCCCcEEE
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG-AVVRGFLGQPQLENALTGMDLVI   93 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~-~~v~~~~~t~dl~~al~~ADiVi   93 (369)
                      .++.+||+|||| |.||+++++.|+..++++||+|+|+++  ++|+++||.|+... ..+...  ++++ ++++|||+||
T Consensus         3 ~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~--~~~~-~~~~~adivI   78 (315)
T PRK00066          3 KKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY--AGDY-SDCKDADLVV   78 (315)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE--eCCH-HHhCCCCEEE
Confidence            355679999999 999999999999999999999999987  78999999998732 344443  2454 7899999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHH
Q 017551           94 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVR  172 (369)
Q Consensus        94 i~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R  172 (369)
                      +++|.||+|||+|.|++..|+++++++++.+.+++|++|++++|||+|++++++    ++++++|++||||+ |.||+.|
T Consensus        79 itag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvsNP~d~~~~~~----~k~sg~p~~~viG~gt~LDs~R  154 (315)
T PRK00066         79 ITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVASNPVDILTYAT----WKLSGFPKERVIGSGTSLDSAR  154 (315)
T ss_pred             EecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCcHHHHHHHH----HHHhCCCHHHEeecCchHHHHH
Confidence            999999999999999999999999999999999999999999999999999765    67789999999999 7899999


Q ss_pred             HHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCC-----------CCCHHHHHHHHhhhccchhhhhhhhccCC
Q 017551          173 ANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-----------SFTQEETEYLTNRIQNGGTEVVEAKAGAG  241 (369)
Q Consensus       173 ~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~-----------~~~~~~~~~l~~~v~~~~~ev~~~k~g~g  241 (369)
                      +++++|+++|++|++|+++||||||+ +++|+||++++.+           .+++++++++.+++++++++|++.   ||
T Consensus       155 ~~~~la~~l~v~~~~V~~~viGeHG~-s~v~~~S~~~v~g~~l~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~~---kg  230 (315)
T PRK00066        155 FRYMLSEKLDVDPRSVHAYIIGEHGD-TEFPVWSHANVAGVPLEEYLEENEQYDEEDLDEIFENVRDAAYEIIEK---KG  230 (315)
T ss_pred             HHHHHHHHhCCCcccEEEEEEecCCC-cceecceeceECCEEHHHHhhhccCcCHHHHHHHHHHHHHHHHHHHhc---CC
Confidence            99999999999999999999999998 9999999998753           134567889999999999999994   58


Q ss_pred             chhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHH
Q 017551          242 SATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCF  319 (369)
Q Consensus       242 ~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i  319 (369)
                      ++.|++|+++++++++|+++.+   .+++++ +++|+| ++++|||+||++|++|+++++++ +|+++|+++|+++++.+
T Consensus       231 ~t~~~~a~~~~~i~~ail~~~~---~v~~~sv~~~g~yg~~~v~~S~Pv~ig~~Gv~~i~~l-~L~~~E~~~L~~s~~~l  306 (315)
T PRK00066        231 ATYYGIAMALARITKAILNNEN---AVLPVSAYLEGQYGEEDVYIGVPAVVNRNGIREIVEL-PLNDDEKQKFAHSADVL  306 (315)
T ss_pred             eehHHHHHHHHHHHHHHHcCCC---eEEEEEEEeccccCCCCEEEEeEEEEeCCcEEEEcCC-CCCHHHHHHHHHHHHHH
Confidence            9999999999999999999754   478776 789999 78999999999999999999996 99999999999999666


Q ss_pred             HHHHH
Q 017551          320 QDWLG  324 (369)
Q Consensus       320 ~~~l~  324 (369)
                      +..++
T Consensus       307 ~~~~~  311 (315)
T PRK00066        307 KEIMD  311 (315)
T ss_pred             HHHHH
Confidence            55554

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=100.00  E-value=7.5e-61  Score=461.85  Aligned_cols=279  Identities=24%  Similarity=0.410  Sum_probs=251.4

Q ss_pred             EEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCC--CeEEEEeCCCChhhhcCCCcEEEEcCCCCC
Q 017551           25 ILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG--AVVRGFLGQPQLENALTGMDLVIIPAGVPR  100 (369)
Q Consensus        25 IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~--~~v~~~~~t~dl~~al~~ADiVii~ag~p~  100 (369)
                      |||+ |+||+++++.|+..++++||+|+|+++  ++|+++||+|+...  ..++..  .++ +++++|||+||++||.||
T Consensus         1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~--~~~-~~~~~daDivVitag~~r   76 (299)
T TIGR01771         1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIR--SGD-YSDCKDADLVVITAGAPQ   76 (299)
T ss_pred             CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEe--cCC-HHHHCCCCEEEECCCCCC
Confidence            6899 999999999999999999999999987  79999999998732  234443  245 479999999999999999


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHHHHHHHH
Q 017551          101 KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAE  179 (369)
Q Consensus       101 k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~~~~la~  179 (369)
                      +|||+|+|++.+|++++++++++|++++|++++|++|||+|++|+++    ++.+++|++||||+ |.||+.|+++++|+
T Consensus        77 k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsNP~d~~t~~~----~~~sg~p~~~viG~gt~LDs~R~~~~la~  152 (299)
T TIGR01771        77 KPGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVATNPVDILTYVA----WKLSGFPKNRVIGSGTVLDTARLRYLLAE  152 (299)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH----HHHhCCCHHHEEeccchHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999998665    78889999999999 88999999999999


Q ss_pred             HhCCCCCCCceeEEeecCCCccccccccCCCCC----CC-------CHHHHHHHHhhhccchhhhhhhhccCCchhhHHH
Q 017551          180 VLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----SF-------TQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMA  248 (369)
Q Consensus       180 ~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~----~~-------~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~s~A  248 (369)
                      ++|++|++|+++||||||+ +++|+||++++.+    ++       .+++++++.++++++|++|++.   ||+|+|++|
T Consensus       153 ~l~v~~~~V~~~v~GeHG~-s~vp~~S~~~v~g~pl~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~~---kG~t~~~~a  228 (299)
T TIGR01771       153 KLGVDPQSVHAYIIGEHGD-SEVPVWSSATIGGVPLLDYLKAKGTETDLDLEEIEKEVRDAAYEIINR---KGATYYGIG  228 (299)
T ss_pred             HhCcCcCeEEEEEEecCCC-ceeeceeeeEECCEEHHHHhhhcccccHHHHHHHHHHHHHHHHHHhhc---CCeeeHHHH
Confidence            9999999999999999998 9999999998743    11       1335779999999999999994   589999999


Q ss_pred             HHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHH
Q 017551          249 YAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCF  319 (369)
Q Consensus       249 ~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i  319 (369)
                      .++++++++|++|.+   .+++|+ +++|+| .+++|||+||+||++|+++++++ +|+++|+++|++++..|
T Consensus       229 ~a~~~~i~ail~d~~---~v~~~s~~~~g~yg~~~~~~s~P~~ig~~Gv~~i~~l-~L~~~E~~~l~~s~~~i  297 (299)
T TIGR01771       229 MAVARIVEAILHDEN---RVLPVSAYLDGEYGIKDVYIGVPAVLGRNGVEEIIEL-PLSDEEKEAFQKSAETL  297 (299)
T ss_pred             HHHHHHHHHHHcCCC---cEEEEEEEecccCCCCCEEEEEEEEEeCCeeEEEccC-CCCHHHHHHHHHHHHHH
Confidence            999999999999864   488885 889999 67899999999999999999995 99999999999998544

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>PRK05442 malate dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-59  Score=457.57  Aligned_cols=294  Identities=22%  Similarity=0.289  Sum_probs=256.3

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCc-----EEEEEeCCC----chhHHHHhhcccC--CCeEEEEeCCCChhhhc
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDT--GAVVRGFLGQPQLENAL   86 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~-----el~L~D~~~----~~g~~~dL~~~~~--~~~v~~~~~t~dl~~al   86 (369)
                      ++++||+||||+|.||+++++.|...++++     ||+|+|+++    ++|+++||+|+.+  ...++..  +++ ++++
T Consensus         2 ~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~--~~~-y~~~   78 (326)
T PRK05442          2 KAPVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVIT--DDP-NVAF   78 (326)
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEe--cCh-HHHh
Confidence            568899999988999999999999998888     999999954    6899999999872  2234442  344 5899


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCChhHHHHHHHHHhC-CCCCCcEEE
Q 017551           87 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAG-TYDPKKLLG  164 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~i~ae~~~~~~-~~~~~kviG  164 (369)
                      +|||+||++||.||+|||+|.|++..|++++++++++|.+|+ |+++++++|||+|++|+++    ++.+ +||++||||
T Consensus        79 ~daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~----~k~s~g~p~~rViG  154 (326)
T PRK05442         79 KDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGNPANTNALIA----MKNAPDLPAENFTA  154 (326)
T ss_pred             CCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCchHHHHHHH----HHHcCCCCHHHEEe
Confidence            999999999999999999999999999999999999999988 7999999999999999876    5677 999999999


Q ss_pred             echhcHHHHHHHHHHHhCCCCCCCcee-EEeecCCCccccccccCCCCCC-----CCHHH--HHHHHhhhccchhhhhhh
Q 017551          165 VTMLDVVRANTFVAEVLGLDPRDVDVP-VVGGHAGVTILPLLSQVKPPCS-----FTQEE--TEYLTNRIQNGGTEVVEA  236 (369)
Q Consensus       165 ~t~Ld~~R~~~~la~~lgv~~~~V~~~-viG~hg~~~~vp~~S~~~~~~~-----~~~~~--~~~l~~~v~~~~~ev~~~  236 (369)
                      +|.||++||+++||++|+++|++|+++ ||||||+ +++|+||++++.+.     +++++  ++++.+++++++++|++.
T Consensus       155 ~t~LDs~R~r~~la~~l~v~~~~V~~~vV~GeHG~-s~~~~~S~~~v~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~  233 (326)
T PRK05442        155 MTRLDHNRALSQLAAKAGVPVADIKKMTVWGNHSA-TQYPDFRHATIDGKPAAEVINDQAWLEDTFIPTVQKRGAAIIEA  233 (326)
T ss_pred             eeHHHHHHHHHHHHHHhCcChHHeEEeEEEECCcC-ceeeccccCEECCEEHHHHccchhhHHHHHHHHHHhhHHHHHhC
Confidence            999999999999999999999999986 5999999 99999999988642     33433  578999999999999994


Q ss_pred             hccCCchhhHHHHH-HHHHHHHHHhccCCCCceeEEE-eecCCC--CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHH
Q 017551          237 KAGAGSATLSMAYA-AVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLF  312 (369)
Q Consensus       237 k~g~g~~~~s~A~a-~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L  312 (369)
                         ||+++|++|.+ +++++++|+++.+ ++.+++++ +++|+|  ++++|||+||++| +|+++++...+|+++|+++|
T Consensus       234 ---kG~t~~~~a~~~~~~iv~ail~~~~-~~~i~~~sv~~~g~ygi~~~v~~s~P~~ig-~Gv~~iv~~l~L~~~E~~~l  308 (326)
T PRK05442        234 ---RGASSAASAANAAIDHVRDWVLGTP-EGDWVSMGVPSDGSYGIPEGLIFGFPVTCE-NGEYEIVQGLEIDDFSREKI  308 (326)
T ss_pred             ---cCCccHHHHHHHHHHHHHHHHhCCC-CCeEEEEEEEecCccCCcCCeEEEEEEEEc-CcEEEEeCCCCCCHHHHHHH
Confidence               58899999999 5999999999853 22488886 679999  5899999999999 99999865249999999999


Q ss_pred             HHHHHHHHHHHH
Q 017551          313 CLLHLCFQDWLG  324 (369)
Q Consensus       313 ~~~~~~i~~~l~  324 (369)
                      +++++.++.+.+
T Consensus       309 ~~s~~~l~~~~~  320 (326)
T PRK05442        309 DATLAELEEERD  320 (326)
T ss_pred             HHHHHHHHHHHH
Confidence            999965554443

>cd00704 MDH Malate dehydrogenase

Probab=100.00  E-value=5.2e-59  Score=453.14  Aligned_cols=289  Identities=27%  Similarity=0.355  Sum_probs=253.1

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCc-----EEEEEeCCC----chhHHHHhhcccC--CCeEEEEeCCCChhhhcCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDT--GAVVRGFLGQPQLENALTGM   89 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~-----el~L~D~~~----~~g~~~dL~~~~~--~~~v~~~~~t~dl~~al~~A   89 (369)
                      .||+||||+|+||+++++.|+++++++     +|+|+|+++    ++++++||.|+.+  .......   ++.+++++||
T Consensus         1 ~KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~i~---~~~~~~~~~a   77 (323)
T cd00704           1 LHVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVIT---TDPEEAFKDV   77 (323)
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcEEe---cChHHHhCCC
Confidence            389999999999999999999999888     499999985    6899999999852  2223332   2346899999


Q ss_pred             cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCChhHHHHHHHHHhCC-CCCCcEEEech
Q 017551           90 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGT-YDPKKLLGVTM  167 (369)
Q Consensus        90 DiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~i~ae~~~~~~~-~~~~kviG~t~  167 (369)
                      |+||++||.|++|||+|++++..|+++++++++.|+++| |+++++++|||+|++|+++    ++.++ +|++||||+|.
T Consensus        78 DiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~----~k~sg~~p~~~vig~t~  153 (323)
T cd00704          78 DVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGNPANTNALIA----LKNAPNLPPKNFTALTR  153 (323)
T ss_pred             CEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeCCcHHHHHHHH----HHHcCCCCHHHEEEeeH
Confidence            999999999999999999999999999999999999996 9999999999999999875    67788 59999999999


Q ss_pred             hcHHHHHHHHHHHhCCCCCCC-ceeEEeecCCCccccccccCCCCCC---------CCHH-HHHHHHhhhccchhhhhhh
Q 017551          168 LDVVRANTFVAEVLGLDPRDV-DVPVVGGHAGVTILPLLSQVKPPCS---------FTQE-ETEYLTNRIQNGGTEVVEA  236 (369)
Q Consensus       168 Ld~~R~~~~la~~lgv~~~~V-~~~viG~hg~~~~vp~~S~~~~~~~---------~~~~-~~~~l~~~v~~~~~ev~~~  236 (369)
                      ||++|||++||++++++|++| +++||||||+ +++|+||++++.+.         ++++ ..+++.+++++++++|++.
T Consensus       154 LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~-s~v~~~S~~~v~g~~~~~~~~~~~~~~~~~~~i~~~v~~~~~~Ii~~  232 (323)
T cd00704         154 LDHNRAKAQVARKLGVRVSDVKNVIIWGNHSN-TQVPDLSNAVVYGPGGTEWVLDLLDEEWLNDEFVKTVQKRGAAIIKK  232 (323)
T ss_pred             HHHHHHHHHHHHHhCcCHHHceeeeEEecccC-ceeeccccceecCccHHHhcccccChHHHHHHHHHHHHhhHHHHHhc
Confidence            999999999999999999999 5699999999 99999999987431         2222 2578999999999999995


Q ss_pred             hccCCchhhH-HHHHHHHHHHHHHhccCCCCceeEEE-eecCCC---CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHH
Q 017551          237 KAGAGSATLS-MAYAAVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYESGL  311 (369)
Q Consensus       237 k~g~g~~~~s-~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~  311 (369)
                         ||++.|+ +|+++++++++|++|.+++ .+++|+ +++|+|   |+++|||+||++|++||+++.++ +|+++|+++
T Consensus       233 ---kg~t~~~~~a~a~~~iv~ail~~~~~~-~v~~~s~~~~g~y~gi~~~v~~s~P~~ig~~Gv~~v~~l-~L~~~E~~~  307 (323)
T cd00704         233 ---RGASSAASAAKAIADHVKDWLFGTPPG-EIVSMGVYSPGNPYGIPPGIVFSFPCTCKGGGWHVVEDL-KLNDWLREK  307 (323)
T ss_pred             ---cCcchhHHHHHHHHHHHHHHHhCCCCC-cEEEEEEEeCCccCCCCCceEEEEEEEEcCCEEEEecCC-CCCHHHHHH
Confidence               4788885 7999999999999998643 388886 889988   47999999999999999999995 999999999


Q ss_pred             HHHHHHHHHHH
Q 017551          312 FCLLHLCFQDW  322 (369)
Q Consensus       312 L~~~~~~i~~~  322 (369)
                      |++++..++++
T Consensus       308 l~~s~~~l~~~  318 (323)
T cd00704         308 LKATEEELIEE  318 (323)
T ss_pred             HHHHHHHHHHH
Confidence            99999544443

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PTZ00117 malate dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-58  Score=448.58  Aligned_cols=295  Identities=31%  Similarity=0.500  Sum_probs=262.0

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCC--CeEEEEeCCCChhhhcCCCcEEE
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG--AVVRGFLGQPQLENALTGMDLVI   93 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~--~~v~~~~~t~dl~~al~~ADiVi   93 (369)
                      .+.+||+|||| |++|+++++.++..++ .+|+|||+++  +.+.++|+.|....  ...+.. .++|++ +++|||+||
T Consensus         3 ~~~~KI~IIGa-G~vG~~ia~~l~~~~~-~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~-~~~d~~-~l~~ADiVV   78 (319)
T PTZ00117          3 VKRKKISMIGA-GQIGSTVALLILQKNL-GDVVLYDVIKGVPQGKALDLKHFSTLVGSNINIL-GTNNYE-DIKDSDVVV   78 (319)
T ss_pred             CCCcEEEEECC-CHHHHHHHHHHHHCCC-CeEEEEECCCccchhHHHHHhhhccccCCCeEEE-eCCCHH-HhCCCCEEE
Confidence            34579999999 9999999999999886 6899999988  67899999997631  223332 356775 999999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEec-hhcHHH
Q 017551           94 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVR  172 (369)
Q Consensus        94 i~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t-~Ld~~R  172 (369)
                      +++|.|+++|++|+|++..|.+++++++++|+++||++|++++|||+|++++++    ++.+++|++|+||+| .||++|
T Consensus        79 itag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsNP~di~t~~~----~~~s~~p~~rviG~gt~lds~R  154 (319)
T PTZ00117         79 ITAGVQRKEEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTNPLDCMVKVF----QEKSGIPSNKICGMAGVLDSSR  154 (319)
T ss_pred             ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecChHHHHHHHH----HHhhCCCcccEEEecchHHHHH
Confidence            999999999999999999999999999999999999999999999999998654    778899999999995 899999


Q ss_pred             HHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCC----------CCCHHHHHHHHhhhccchhhhhhhhccCCc
Q 017551          173 ANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEAKAGAGS  242 (369)
Q Consensus       173 ~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~----------~~~~~~~~~l~~~v~~~~~ev~~~k~g~g~  242 (369)
                      ++++||+++|++|++|+++|+||||+ +++|+||++++.+          .+.+++++++.+++++++++|++.+ |+|+
T Consensus       155 ~~~~la~~l~v~~~~v~~~viGeHg~-~~v~~~s~~~v~g~p~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~~~-~kg~  232 (319)
T PTZ00117        155 FRCNLAEKLGVSPGDVSAVVIGGHGD-LMVPLPRYCTVNGIPLSDFVKKGAITEKEINEIIKKTRNMGGEIVKLL-KKGS  232 (319)
T ss_pred             HHHHHHHHhCCCcccceEEEeecCCC-cEEeceeeceECCEEHHHHhhccccCHHHHHHHHHHHHHHHHHHHhhc-CCCC
Confidence            99999999999999999999999998 9999999998743          2456678899999999999999976 7899


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHH
Q 017551          243 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQ  320 (369)
Q Consensus       243 ~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~  320 (369)
                      ++|++|+++++++++|++|.+   .+++++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++++..|+
T Consensus       233 t~~~~a~a~~~~~~ail~~~~---~v~~~s~~~~g~yg~~~~~~s~P~~ig~~Gv~~i~~l-~l~~~E~~~l~~s~~~l~  308 (319)
T PTZ00117        233 AFFAPAAAIVAMIEAYLKDEK---RVLVCSVYLNGQYNCKNLFVGVPVVIGGKGIEKVIEL-ELNAEEKELFDKSIESIQ  308 (319)
T ss_pred             hHHHHHHHHHHHHHHHhcCCC---eEEEEEEEeccccCCCCeEEEEEEEEeCCeEEEEeCC-CCCHHHHHHHHHHHHHHH
Confidence            999999999999999999864   488887 889999 46899999999999999999995 999999999999997776


Q ss_pred             HHHHhh
Q 017551          321 DWLGES  326 (369)
Q Consensus       321 ~~l~~~  326 (369)
                      +.+++.
T Consensus       309 ~~~~~~  314 (319)
T PTZ00117        309 ELTQKA  314 (319)
T ss_pred             HHHHHH
Confidence            666544

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=100.00  E-value=1.4e-58  Score=448.26  Aligned_cols=287  Identities=24%  Similarity=0.373  Sum_probs=256.0

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC--CCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~--~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      +||+|||+ |.+|+++++.|+..++..+|+|+|++.  +++.++||.|...  .......  ..++ +++++||+||+++
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~--~~~~-~~l~~aDIVIita   76 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK--AGDY-SDCKDADIVVITA   76 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE--cCCH-HHhCCCCEEEEcc
Confidence            39999999 999999999999999888999999987  6889999999763  2233433  2454 6799999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHHHH
Q 017551           97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANT  175 (369)
Q Consensus        97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~~~  175 (369)
                      |.||+|||+|.+++.+|++++++++++|+++||+++++++|||+|++|+++    +++++||++||||+ |.||++|+++
T Consensus        77 g~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsNP~d~~~~~~----~~~~g~p~~~v~g~gt~LDs~R~~~  152 (306)
T cd05291          77 GAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASNPVDVITYVV----QKLSGLPKNRVIGTGTSLDTARLRR  152 (306)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecChHHHHHHHH----HHHhCcCHHHEeeccchHHHHHHHH
Confidence            999999999999999999999999999999999999999999999998655    77899999999999 7899999999


Q ss_pred             HHHHHhCCCCCCCceeEEeecCCCccccccccCCCCC----------CCCHHHHHHHHhhhccchhhhhhhhccCCchhh
Q 017551          176 FVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEAKAGAGSATL  245 (369)
Q Consensus       176 ~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~----------~~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~  245 (369)
                      +||+++|+++++|+++|||+||+ +++|+||++++.+          .+.+++++++.++++++|++|++.   ||+++|
T Consensus       153 ~la~~l~v~~~~v~~~V~G~Hg~-s~~~~~S~~~v~g~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~ii~~---kg~t~~  228 (306)
T cd05291         153 ALAEKLNVDPRSVHAYVLGEHGD-SQFVAWSTVTVGGKPLLDLLKEGKLSELDLDEIEEDVRKAGYEIING---KGATYY  228 (306)
T ss_pred             HHHHHHCCCcccceEEEEecCCC-ceeecceeeEEcCEEHHHHhhccccChHHHHHHHHHHHHHHHHHHHc---cCccHH
Confidence            99999999999999999999998 9999999998743          133456889999999999999994   589999


Q ss_pred             HHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 017551          246 SMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWL  323 (369)
Q Consensus       246 s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~l  323 (369)
                      ++|.++++++++|+++.+   .+++++ +++|+| ++++|||+||++|++|+++++++ +|+++|+++|++++..+++.+
T Consensus       229 ~~a~a~~~~~~ail~~~~---~v~~~s~~~~g~yg~~~v~~s~P~~ig~~Gv~~i~~~-~l~~~E~~~l~~s~~~l~~~~  304 (306)
T cd05291         229 GIATALARIVKAILNDEN---AILPVSAYLDGEYGEKDVYIGVPAIIGRNGVEEVIEL-DLTEEEQEKFEKSADIIKENI  304 (306)
T ss_pred             HHHHHHHHHHHHHHcCCC---EEEEEEEEeccccCCCCEEEEEEEEEeCCCEEEEECC-CCCHHHHHHHHHHHHHHHHHh
Confidence            999999999999999754   478876 789999 78999999999999999999995 999999999999996665444

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=100.00  E-value=1.6e-58  Score=446.41  Aligned_cols=285  Identities=28%  Similarity=0.414  Sum_probs=255.3

Q ss_pred             EEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCC-CeEEEEeCCCChhhhcCCCcEEEEcCCCC
Q 017551           23 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG-AVVRGFLGQPQLENALTGMDLVIIPAGVP   99 (369)
Q Consensus        23 I~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~-~~v~~~~~t~dl~~al~~ADiVii~ag~p   99 (369)
                      |+|||+ |.||+++++.|+..+++.||+|+|+++  +.++++||.|.... ...+.+. ++|+ ++++|||+||+++|.|
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~-~~~~-~~l~~aDiVIitag~p   77 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVR-GGDY-ADAADADIVVITAGAP   77 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEE-CCCH-HHhCCCCEEEEcCCCC
Confidence            689999 999999999999999999999999988  78999999998743 2333333 3564 7999999999999999


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHHHHHHH
Q 017551          100 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVA  178 (369)
Q Consensus       100 ~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~~~~la  178 (369)
                      ++|||+|.+++.+|++++++++++|+++||++|+|++|||+|++++++    ++++++|++||||+ |.||+.|+++++|
T Consensus        78 ~~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~sNP~d~~~~~~----~~~sg~~~~kviG~gt~lDs~r~~~~la  153 (300)
T cd00300          78 RKPGETRLDLINRNAPILRSVITNLKKYGPDAIILVVSNPVDILTYVA----QKLSGLPKNRVIGSGTLLDSARFRSLLA  153 (300)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccChHHHHHHHH----HHHhCcCHHHEEecCCcHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999998754    78889999999999 7899999999999


Q ss_pred             HHhCCCCCCCceeEEeecCCCccccccccCCCCC-C------CCHHHHHHHHhhhccchhhhhhhhccCCchhhHHHHHH
Q 017551          179 EVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-S------FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAA  251 (369)
Q Consensus       179 ~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~-~------~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~s~A~a~  251 (369)
                      +++|+++++|+++|+||||+ +++|+||++++.+ +      .+++.++++.+++++++++|++.   ||+++|++|+++
T Consensus       154 ~~l~v~~~~v~~~viGeHg~-s~v~~~S~~~v~g~p~~~~~~~~~~~~~~l~~~v~~~~~~ii~~---kg~t~~~~a~a~  229 (300)
T cd00300         154 EKLDVDPQSVHAYVLGEHGD-SQVVAWSTATVGGLPLEELAPFTKLDLEAIEEEVRTSGYEIIRL---KGATNYGIATAI  229 (300)
T ss_pred             HHhCCCcccEEEEEEeccCC-ceeeeeeeeEECCEEHHHhhcccHHHHHHHHHHHHHHHHHHHHc---cCcchHHHHHHH
Confidence            99999999999999999998 8999999998753 1      13456889999999999999994   589999999999


Q ss_pred             HHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 017551          252 VKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDW  322 (369)
Q Consensus       252 ~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~  322 (369)
                      ++++++|+++.+   .+++++ +++|+| ++++|||+||++|++|+++++++ +|+++|+++|++++..++..
T Consensus       230 ~~~~~ai~~~~~---~v~~~s~~~~g~yg~~~~~~s~Pv~ig~~Gi~~i~~l-~L~~~E~~~l~~s~~~l~~~  298 (300)
T cd00300         230 ADIVKSILLDER---RVLPVSAVQEGQYGIEDVALSVPAVVGREGVVRILEI-PLTEDEEAKLQKSAEALKEV  298 (300)
T ss_pred             HHHHHHHHcCCC---eEEEEEEEecCccCCCCEEEEEEEEEeCCCeEEEecC-CCCHHHHHHHHHHHHHHHHH
Confidence            999999999754   488887 679999 78999999999999999999985 99999999999999655443

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=100.00  E-value=2.3e-58  Score=461.34  Aligned_cols=288  Identities=22%  Similarity=0.233  Sum_probs=254.5

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhC-------CCCcEEEEEeCCC--chhHHHHhhcccC--CCeEEEEeCCCChhhh
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKIN-------PLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENA   85 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~-------~~~~el~L~D~~~--~~g~~~dL~~~~~--~~~v~~~~~t~dl~~a   85 (369)
                      .+++.||+||||+|+||+++++.|+++       ++..||+|+|+++  ++|+++||+|+.+  ...+.+.  +++ +++
T Consensus        97 ~~~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~--~~~-ye~  173 (444)
T PLN00112         97 WKKLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIG--IDP-YEV  173 (444)
T ss_pred             CCCCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEe--cCC-HHH
Confidence            366789999999999999999999998       7778999999988  7999999999873  2344432  345 589


Q ss_pred             cCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhh-hCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEE
Q 017551           86 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAK-CCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  164 (369)
Q Consensus        86 l~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~-~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG  164 (369)
                      ++|||+||++||.||+|||+|.|++..|+++++++++.|.+ ++|++++|++|||+|++|+++    ++.++++++|+||
T Consensus       174 ~kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsNPvDv~t~v~----~k~sg~~~~rViG  249 (444)
T PLN00112        174 FQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGNPCNTNALIC----LKNAPNIPAKNFH  249 (444)
T ss_pred             hCcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCCcHHHHHHHH----HHHcCCCCcceEE
Confidence            99999999999999999999999999999999999999999 589999999999999999776    7888999999999


Q ss_pred             e-chhcHHHHHHHHHHHhCCCCCCC-ceeEEeecCCCccccccccCCCCCC-----CCHHH--HHHHHhhhccchhhhhh
Q 017551          165 V-TMLDVVRANTFVAEVLGLDPRDV-DVPVVGGHAGVTILPLLSQVKPPCS-----FTQEE--TEYLTNRIQNGGTEVVE  235 (369)
Q Consensus       165 ~-t~Ld~~R~~~~la~~lgv~~~~V-~~~viG~hg~~~~vp~~S~~~~~~~-----~~~~~--~~~l~~~v~~~~~ev~~  235 (369)
                      . |.||++||+++||+++|+++++| +++||||||+ +++|+||++++.+.     +++++  ++++.++++++|++|++
T Consensus       250 tgT~LDsaR~r~~LA~~l~V~~~~V~~~~V~GeHGd-sqvp~wS~a~V~G~pl~e~i~~~~~~~~ei~~~v~~~g~~Ii~  328 (444)
T PLN00112        250 ALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHST-TQVPDFLNAKINGLPVKEVITDHKWLEEEFTPKVQKRGGVLIK  328 (444)
T ss_pred             eeccHHHHHHHHHHHHHhCcCHHHcccceEEecCCC-ceeeccceeEECCccHHHhhccccchHHHHHHHHHHHHHHHHh
Confidence            9 89999999999999999999999 5699999999 99999999988541     22323  67899999999999998


Q ss_pred             hhccCCchhh-HHHHHHHHHHHHHHhccCCCCceeEEE-eecC-CC--CCccEEEEEEEEcCCCeEEEc-cCCCCCHHHH
Q 017551          236 AKAGAGSATL-SMAYAAVKFADACLRGLRGDAGVVECA-FVAS-QV--TELPFFASKVRLGRQGAEEIF-QLGPLNEYES  309 (369)
Q Consensus       236 ~k~g~g~~~~-s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g-~~--~~~~~~svPv~lg~~Gv~~~~-~~~~L~~~E~  309 (369)
                      .   +|+++| ++|.++++++.+|+++.+. +.+++++ +++| +|  +++++||+||++|++|+++++ ++ +|+++|+
T Consensus       329 ~---kG~t~~~s~a~ai~~~I~ail~~~d~-~~vlpvsv~l~G~~YGi~~dv~~SvPvvig~~Gv~~Iv~el-~L~~~E~  403 (444)
T PLN00112        329 K---WGRSSAASTAVSIADAIKSLVTPTPE-GDWFSTGVYTDGNPYGIAEGLVFSMPCRSKGDGDYEIVKDV-EIDDYLR  403 (444)
T ss_pred             c---cCchhHHHHHHHHHHHHHHHHcCCCC-CeEEEEEEEeCCcccCCCCCeEEEeEEEEeCCeeEEECCCC-CCCHHHH
Confidence            4   576766 9999999999999965543 3588886 7899 48  589999999999999999999 65 9999999


Q ss_pred             HHHHHHHH
Q 017551          310 GLFCLLHL  317 (369)
Q Consensus       310 ~~L~~~~~  317 (369)
                      ++|++++.
T Consensus       404 ~~l~~Sa~  411 (444)
T PLN00112        404 ERIKKSEA  411 (444)
T ss_pred             HHHHHHHH
Confidence            99999994

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-57  Score=442.97  Aligned_cols=290  Identities=33%  Similarity=0.568  Sum_probs=258.3

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC--CCeEEEEeCCCChhhhcCCCcEEEE
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVII   94 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~--~~~v~~~~~t~dl~~al~~ADiVii   94 (369)
                      +.+||+|||| |.+|+++++.++..++ .+|+|+|+++  +.+.++|+.|...  ....+.. .++|+ ++++|||+||+
T Consensus         5 ~~~KI~IIGa-G~vG~~ia~~la~~gl-~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~-~~~d~-~~l~~aDiVI~   80 (321)
T PTZ00082          5 KRRKISLIGS-GNIGGVMAYLIVLKNL-GDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVI-GTNNY-EDIAGSDVVIV   80 (321)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCC-CeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEE-ECCCH-HHhCCCCEEEE
Confidence            4579999998 9999999999999887 4699999988  5788999999752  2223333 25677 68999999999


Q ss_pred             cCCCCCCCCC-----CHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEec-hh
Q 017551           95 PAGVPRKPGM-----TRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-ML  168 (369)
Q Consensus        95 ~ag~p~k~g~-----~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t-~L  168 (369)
                      ++|.|++||+     +|++++..|++++++++++|+++||++|+|++|||+|++++.+    ++.+++|++||||+| .|
T Consensus        81 tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sNP~di~t~~~----~~~sg~p~~rviGlgt~l  156 (321)
T PTZ00082         81 TAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITNPLDVMVKLL----QEHSGLPKNKVCGMAGVL  156 (321)
T ss_pred             CCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----HHhcCCChhhEEEecCcc
Confidence            9999999999     9999999999999999999999999999999999999998654    788999999999995 79


Q ss_pred             cHHHHHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCC----------CCCHHHHHHHHhhhccchhhhhhhhc
Q 017551          169 DVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEAKA  238 (369)
Q Consensus       169 d~~R~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~----------~~~~~~~~~l~~~v~~~~~ev~~~k~  238 (369)
                      |+.|++++||+++|+++++|+++|+||||+ +++|+||++++.+          .+++++++++.++++++|++|++.+ 
T Consensus       157 ds~R~~~~la~~l~v~~~~v~~~viGeHg~-s~v~~~S~~~i~g~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~i~~~~-  234 (321)
T PTZ00082        157 DSSRLRTYIAEKLGVNPRDVHASVIGAHGD-KMVPLPRYVTVGGIPLSEFIKKGLITQEEIDEIVERTRNTGKEIVDLL-  234 (321)
T ss_pred             cHHHHHHHHHHHhCCCcccceeeEEecCCC-ceEecceeeEECCEEHHHhhhcccCCHHHHHHHHHHHHHHHHHHHhhc-
Confidence            999999999999999999999999999998 9999999998743          1456678999999999999999976 


Q ss_pred             cCCchhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHH
Q 017551          239 GAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLH  316 (369)
Q Consensus       239 g~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~  316 (369)
                      |+|+|+|++|.++++++++|++|.+   .+++|+ +++|+| .+++|+|+||+||++|+++++++ +|+++|+++|++++
T Consensus       235 gkg~t~~~ia~a~~~i~~ail~d~~---~v~~vs~~~~g~yg~~~v~~s~P~~ig~~Gv~~i~~~-~l~~~E~~~l~~sa  310 (321)
T PTZ00082        235 GTGSAYFAPAAAAIEMAEAYLKDKK---RVLPCSAYLEGQYGHKDIYMGTPAVIGANGVEKIIEL-DLTPEEQKKFDESI  310 (321)
T ss_pred             CCCccHHHHHHHHHHHHHHHHcCCC---cEEEEEEEecccCCCCCeEEEEEEEEeCCeEEEEeCC-CCCHHHHHHHHHHH
Confidence            7899999999999999999999865   488887 789999 67899999999999999999995 99999999999999


Q ss_pred             HHHHHH
Q 017551          317 LCFQDW  322 (369)
Q Consensus       317 ~~i~~~  322 (369)
                      +.+++.
T Consensus       311 ~~i~~~  316 (321)
T PTZ00082        311 KEVKRL  316 (321)
T ss_pred             HHHHHH
Confidence            555443

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=100.00  E-value=6e-58  Score=445.49  Aligned_cols=292  Identities=22%  Similarity=0.287  Sum_probs=256.9

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCc-----EEEEEeCCC----chhHHHHhhcccC--CCeEEEEeCCCChhhhcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDT--GAVVRGFLGQPQLENALT   87 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~-----el~L~D~~~----~~g~~~dL~~~~~--~~~v~~~~~t~dl~~al~   87 (369)
                      +++||+||||+|+||+++++.|.+.++++     ||+|+|+++    ++|+++||+|+.+  ...+++.  +++ +++++
T Consensus         1 ~p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~--~~~-~~~~~   77 (322)
T cd01338           1 KPVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT--DDP-NVAFK   77 (322)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe--cCc-HHHhC
Confidence            46799999999999999999999999999     999999954    6899999999873  2344443  344 58999


Q ss_pred             CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCChhHHHHHHHHHhC-CCCCCcEEEe
Q 017551           88 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAG-TYDPKKLLGV  165 (369)
Q Consensus        88 ~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~i~ae~~~~~~-~~~~~kviG~  165 (369)
                      |||+||++||.||+|||+|.+++..|++++++++++|.+++ |++++|++|||+|++|+++    ++.+ +||++||||+
T Consensus        78 daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~----~k~sg~~p~~~ViG~  153 (322)
T cd01338          78 DADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIA----MKNAPDIPPDNFTAM  153 (322)
T ss_pred             CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHH----HHHcCCCChHheEEe
Confidence            99999999999999999999999999999999999999999 5999999999999999876    5677 5999999999


Q ss_pred             chhcHHHHHHHHHHHhCCCCCCCce-eEEeecCCCccccccccCCCCC---C--CCHHH--HHHHHhhhccchhhhhhhh
Q 017551          166 TMLDVVRANTFVAEVLGLDPRDVDV-PVVGGHAGVTILPLLSQVKPPC---S--FTQEE--TEYLTNRIQNGGTEVVEAK  237 (369)
Q Consensus       166 t~Ld~~R~~~~la~~lgv~~~~V~~-~viG~hg~~~~vp~~S~~~~~~---~--~~~~~--~~~l~~~v~~~~~ev~~~k  237 (369)
                      |.||+.||++++|+++|+++++|++ +|||+||+ +++|+||++++.+   .  +.+.+  ++++.+++++++++|++. 
T Consensus       154 t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG~-s~vp~~S~~~v~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~-  231 (322)
T cd01338         154 TRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHSP-TQYPDFTNATIGGKPAAEVINDRAWLEDEFIPTVQKRGAAIIKA-  231 (322)
T ss_pred             hHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCcc-cEEEehhhcEECCEeHHHhcChHhhHHHHHHHHHHhhHHHHHhC-
Confidence            9999999999999999999999998 56999998 9999999998753   1  34433  679999999999999994 


Q ss_pred             ccCCchhhHHH-HHHHHHHHHHHhccCCCCceeEEE-eecCCC--CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHH
Q 017551          238 AGAGSATLSMA-YAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFC  313 (369)
Q Consensus       238 ~g~g~~~~s~A-~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~  313 (369)
                        ||++.|++| +++++++++|++|.+. +.+++++ +++|+|  |+++|||+||++|++|+++++++ +|+++|+++|+
T Consensus       232 --kG~t~~~~~a~a~~~iv~ail~~~~~-~~i~~~sv~~~g~yg~~~~v~~s~P~~ig~~Gv~~i~~l-~L~~~E~~~l~  307 (322)
T cd01338         232 --RGASSAASAANAAIDHMRDWVLGTPE-GDWFSMAVPSDGSYGIPEGLIFSFPVRSKGGGYEIVEGL-EIDDFAREKID  307 (322)
T ss_pred             --cCCccHHHHHHHHHHHHHHHhcCCCC-CeEEEEEEEccCccCCCCCeEEEEEEEEeCCEEEEEeCC-CCCHHHHHHHH
Confidence              588999999 6999999999998852 2488886 679999  58999999999999999999996 99999999999


Q ss_pred             HHHHHHHHHH
Q 017551          314 LLHLCFQDWL  323 (369)
Q Consensus       314 ~~~~~i~~~l  323 (369)
                      ++++.++.+-
T Consensus       308 ~s~~~l~~~~  317 (322)
T cd01338         308 ATLAELLEER  317 (322)
T ss_pred             HHHHHHHHHH
Confidence            9995554443

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=100.00  E-value=8.5e-58  Score=451.16  Aligned_cols=290  Identities=21%  Similarity=0.237  Sum_probs=252.1

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCc-----EEEEE--eCCC--chhHHHHhhcccC--CCeEEEEeCCCChhhh
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLY--DVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENA   85 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~-----el~L~--D~~~--~~g~~~dL~~~~~--~~~v~~~~~t~dl~~a   85 (369)
                      .+++.||+||||+|+||+++++.|...++++     +|+|+  |++.  ++|+++||.|+.+  ...+...  +++ +++
T Consensus        41 ~~~p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~--~~~-y~~  117 (387)
T TIGR01757        41 WKKTVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIG--IDP-YEV  117 (387)
T ss_pred             CCCCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEe--cCC-HHH
Confidence            4567899999999999999999999999888     67777  5555  7899999999872  2334432  345 589


Q ss_pred             cCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEE
Q 017551           86 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  164 (369)
Q Consensus        86 l~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG  164 (369)
                      ++|||+||++||.||+|||+|.+++..|+++++++++.|.+++ |++++|++|||+|++|+++    ++.++++|+|+||
T Consensus       118 ~kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsNPvDv~t~v~----~k~sg~~~~rviG  193 (387)
T TIGR01757       118 FEDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGNPCNTNALIA----MKNAPNIPRKNFH  193 (387)
T ss_pred             hCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCcHHHHHHHH----HHHcCCCcccEEE
Confidence            9999999999999999999999999999999999999999987 9999999999999999776    6788999999999


Q ss_pred             e-chhcHHHHHHHHHHHhCCCCCCCc-eeEEeecCCCccccccccCCCCC-C----CCHHH--HHHHHhhhccchhhhhh
Q 017551          165 V-TMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHAGVTILPLLSQVKPPC-S----FTQEE--TEYLTNRIQNGGTEVVE  235 (369)
Q Consensus       165 ~-t~Ld~~R~~~~la~~lgv~~~~V~-~~viG~hg~~~~vp~~S~~~~~~-~----~~~~~--~~~l~~~v~~~~~ev~~  235 (369)
                      . |.||++|||++||+++++++++|+ ++||||||+ +++|+||++++.+ +    +++.+  ++++.++++++|++|++
T Consensus       194 ~gT~LDsaR~r~~LA~~l~v~~~~V~~~~V~GeHGd-s~vp~~S~a~V~G~pl~~~~~~~~~~~~ei~~~v~~~g~eIi~  272 (387)
T TIGR01757       194 ALTRLDENRAKCQLALKSGKFYTSVSNVTIWGNHST-TQVPDFVNAKIGGRPAKEVIKDTKWLEEEFTPTVQKRGGALIK  272 (387)
T ss_pred             ecchhHHHHHHHHHHHHHCcChhHcceeEEEecCCC-cEEecceeeEECCEEhHHhcccccchHHHHHHHHHHHHHHHHh
Confidence            9 899999999999999999999995 999999998 9999999998753 1    22222  67899999999999998


Q ss_pred             hhccCCchhh-HHHHHHHHHHHHHHhccCCCCceeEEE-eecCC-C--CCccEEEEEEEEcCCCeEEEc-cCCCCCHHHH
Q 017551          236 AKAGAGSATL-SMAYAAVKFADACLRGLRGDAGVVECA-FVASQ-V--TELPFFASKVRLGRQGAEEIF-QLGPLNEYES  309 (369)
Q Consensus       236 ~k~g~g~~~~-s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~-~--~~~~~~svPv~lg~~Gv~~~~-~~~~L~~~E~  309 (369)
                      .   ||+++| ++|.++++++.+|++|.+. +.+++++ +++|+ |  +++++||+||++|++|+++++ ++ +|+++|+
T Consensus       273 ~---KG~t~~~s~a~ai~~~i~ai~~g~d~-~~il~vsv~~~Ge~YGi~~gv~~S~Pvvig~~Gv~~Iv~~l-~L~~~E~  347 (387)
T TIGR01757       273 K---WGRSSAASTAVSIADAIKSLVVPTPE-GDWFSTGVYTDGNPYGIAEGLVFSMPCRSKGDGDYELATDV-SMDDFLR  347 (387)
T ss_pred             c---cCchhHHHHHHHHHHHHHHHhcCCCC-CeEEEEEEEeCCcccCCCCCEEEEEEEEEeCCEEEEECCCC-CCCHHHH
Confidence            4   566666 9999999999999965543 3488886 77996 8  589999999999999999996 75 9999999


Q ss_pred             HHHHHHHHHH
Q 017551          310 GLFCLLHLCF  319 (369)
Q Consensus       310 ~~L~~~~~~i  319 (369)
                      ++|++++..+
T Consensus       348 ~~l~~Sa~~L  357 (387)
T TIGR01757       348 ERIRKSEDEL  357 (387)
T ss_pred             HHHHHHHHHH
Confidence            9999999544

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=100.00  E-value=1.3e-57  Score=440.79  Aligned_cols=287  Identities=30%  Similarity=0.504  Sum_probs=256.4

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC----CCeEEEEeCCCChhhhcCCCcEEEE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT----GAVVRGFLGQPQLENALTGMDLVII   94 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~----~~~v~~~~~t~dl~~al~~ADiVii   94 (369)
                      +||+|||+ |.||+.+|+.++.+++. +|+|+|+++  ..+.++|+.|...    ..+++.   ++|++ ++++||+||+
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~-~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~---t~d~~-~~~~aDiVIi   75 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELA-DLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTG---TNNYA-DTANSDIVVI   75 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCC-eEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEe---cCCHH-HhCCCCEEEE
Confidence            69999999 99999999999999877 799999987  5678888887642    223432   56774 5999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHH
Q 017551           95 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA  173 (369)
Q Consensus        95 ~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~  173 (369)
                      ++|.|+++|++|++++..|++++++++++|.+++|++++|++|||+|++++++    ++.+|+|++||||+ |.||++|+
T Consensus        76 tag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tNP~di~t~~~----~~~sg~~~~rviG~g~~lds~R~  151 (305)
T TIGR01763        76 TAGLPRKPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSNPLDAMTYVA----WQKSGFPKERVIGQAGVLDSARF  151 (305)
T ss_pred             cCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----HHHHCcCHHHEEEeccchHHHHH
Confidence            99999999999999999999999999999999999999999999999998765    78889999999999 57999999


Q ss_pred             HHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCCC-----CCHHHHHHHHhhhccchhhhhhhhccCCchhhHHH
Q 017551          174 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCS-----FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMA  248 (369)
Q Consensus       174 ~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~~-----~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~s~A  248 (369)
                      +++||++|++++++|+++||||||+ +++|+||++++.+.     ++++.++++.++++++|++|++++ |+|+++|++|
T Consensus       152 ~~~la~~l~v~~~~v~~~v~GeHg~-s~~~~wS~~~i~g~~~~~~~~~~~~~~l~~~v~~~g~~ii~~~-~kg~t~~~~a  229 (305)
T TIGR01763       152 RTFIAMELGVSVQDVTACVLGGHGD-AMVPLVRYSTVAGIPVADLISAERIAEIVERTRKGGGEIVNLL-KQGSAYYAPA  229 (305)
T ss_pred             HHHHHHHhCcCHHHeeeeEEecCCC-cEEeeeeeeEECCEEHHHhcCHHHHHHHHHHHHHHHHHHHHhc-CCCChHHHHH
Confidence            9999999999999999999999999 99999999987541     344558999999999999999976 7899999999


Q ss_pred             HHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 017551          249 YAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWL  323 (369)
Q Consensus       249 ~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~l  323 (369)
                      .++++++++|++|.+   .+++++ +++|+| .+++|+|+||+||++|+++++++ +|+++|+++|+++++.|++.+
T Consensus       230 ~~~~~i~~ai~~~~~---~v~~~s~~~~~~yg~~~v~~s~P~~ig~~Gv~~i~~~-~l~~~E~~~l~~s~~~i~~~~  302 (305)
T TIGR01763       230 ASVVEMVEAILKDRK---RVLPCAAYLDGQYGIDGIYVGVPVILGKNGVEHIYEL-KLDQSELALLNKSAKIVDENC  302 (305)
T ss_pred             HHHHHHHHHHhCCCC---eEEEEEEEecccCCCCceEEEEEEEEeCCeEEEEeCC-CCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999865   488886 789999 68999999999999999999996 999999999999996555444

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=100.00  E-value=1.1e-56  Score=435.10  Aligned_cols=287  Identities=28%  Similarity=0.432  Sum_probs=257.3

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC-CCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~-~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      |||+|||+ |.+|+++++.|+.+++..+|+|+|++.  +.+.++|+.|... ......+  ++|+ +++++||+||+++|
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~--~~d~-~~l~~aDiViita~   76 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIY--AGDY-ADCKGADVVVITAG   76 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEe--eCCH-HHhCCCCEEEEccC
Confidence            69999999 999999999999999889999999987  6789999998752 2233443  3565 78999999999999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHHHHH
Q 017551           98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTF  176 (369)
Q Consensus        98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~~~~  176 (369)
                      .|+++|++|.+++.+|+++++++++.+++++|+++++++|||+|++++++    ++.+|||++||||+ |.||+.|++++
T Consensus        77 ~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~tNP~d~~~~~~----~~~sg~p~~~viG~gt~LDs~R~~~~  152 (308)
T cd05292          77 ANQKPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVTNPVDVLTYVA----YKLSGLPPNRVIGSGTVLDTARFRYL  152 (308)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----HHHHCcCHHHeecccchhhHHHHHHH
Confidence            99999999999999999999999999999999999999999999999765    67889999999999 89999999999


Q ss_pred             HHHHhCCCCCCCceeEEeecCCCccccccccCCCCC------------CCCHHHHHHHHhhhccchhhhhhhhccCCchh
Q 017551          177 VAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC------------SFTQEETEYLTNRIQNGGTEVVEAKAGAGSAT  244 (369)
Q Consensus       177 la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~------------~~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~  244 (369)
                      ||+++++++++|+++||||||+ +++|+||++++.+            .+++++++++.+++++++++|++.   ||+|+
T Consensus       153 la~~~~v~~~~v~~~viGeHg~-~~~~~~S~~~v~g~~~~~~~~~~~~~~~~~~~~~l~~~v~~~g~~ii~~---kg~t~  228 (308)
T cd05292         153 LGEHLGVDPRSVHAYIIGEHGD-SEVAVWSSANIGGVPLDEFCKLCGRPFDEEVREEIFEEVRNAAYEIIER---KGATY  228 (308)
T ss_pred             HHHHhCCCccceeceeeccCCC-cEEecceeeeECCEEHHHHhhhcccccCHHHHHHHHHHHHHHHHHHHHc---CCccH
Confidence            9999999999999999999998 9999999998642            234456889999999999999995   58999


Q ss_pred             hHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 017551          245 LSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDW  322 (369)
Q Consensus       245 ~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~  322 (369)
                      |++|+++++++++|+++.+   .+++++ +++|+| .+++|||+||+||++|+++++++ +|+++|+++|+++++.|+..
T Consensus       229 ~~~a~a~~~i~~ail~~~~---~v~~~s~~~~g~yg~~~~~~s~P~~ig~~Gv~~i~~~-~L~~~E~~~l~~s~~~i~~~  304 (308)
T cd05292         229 YAIGLALARIVEAILRDEN---SVLTVSSLLDGQYGIKDVALSLPCIVGRSGVERVLPP-PLSEEEEEALRASAEVLKEA  304 (308)
T ss_pred             HHHHHHHHHHHHHHHcCCC---cEEEEEEEEcccCCCCCEEEEEEEEEeCCceEEecCC-CCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999754   488886 789999 57899999999999999999995 99999999999999666554


Q ss_pred             H
Q 017551          323 L  323 (369)
Q Consensus       323 l  323 (369)
                      +
T Consensus       305 ~  305 (308)
T cd05292         305 I  305 (308)
T ss_pred             H
Confidence            4

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=100.00  E-value=6.3e-56  Score=431.70  Aligned_cols=292  Identities=23%  Similarity=0.305  Sum_probs=249.8

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCc-----EEEEEeCCC----chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEE
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLV   92 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~-----el~L~D~~~----~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiV   92 (369)
                      ||+||||+|.||+++++.|.++++++     +|+|+|+++    ++++++||.|...... .....+++.+++++|||+|
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~~Dl~d~~~~~~-~~~~~~~~~~~~~~~aDiV   79 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVVMELMDCAFPLL-DGVVPTHDPAVAFTDVDVA   79 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccceeEeehhcccchhc-CceeccCChHHHhCCCCEE
Confidence            69999999999999999999988875     799999954    5789999999873211 1112233546899999999


Q ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcH
Q 017551           93 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDV  170 (369)
Q Consensus        93 ii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~  170 (369)
                      |++||.|+++|++|.+++..|++++++++++|.+++ |++++|++|||+|++|+++    ++.++++|+|+||+ |.||+
T Consensus        80 VitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsNPvDv~t~v~----~~~sg~~~~~vig~gt~LDs  155 (324)
T TIGR01758        80 ILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGNPANTNALVL----SNYAPSIPPKNFSALTRLDH  155 (324)
T ss_pred             EEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHH----HHHcCCCCcceEEEeeehHH
Confidence            999999999999999999999999999999999996 9999999999999999776    67777788889999 89999


Q ss_pred             HHHHHHHHHHhCCCCCCCc-eeEEeecCCCccccccccCCCC-C----C----CCHHH--HHHHHhhhccchhhhhhhhc
Q 017551          171 VRANTFVAEVLGLDPRDVD-VPVVGGHAGVTILPLLSQVKPP-C----S----FTQEE--TEYLTNRIQNGGTEVVEAKA  238 (369)
Q Consensus       171 ~R~~~~la~~lgv~~~~V~-~~viG~hg~~~~vp~~S~~~~~-~----~----~~~~~--~~~l~~~v~~~~~ev~~~k~  238 (369)
                      +|||++||+++|++|++|+ ++||||||+ +++|+||++++. +    +    +++++  ++++.+++++++++|++.| 
T Consensus       156 ~R~r~~la~~l~v~~~~V~~~~V~GeHG~-s~v~~~S~~~v~~g~~~~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k-  233 (324)
T TIGR01758       156 NRALAQVAERAGVPVSDVKNVIIWGNHSS-TQYPDVNHATVTKGGKQKPVREAIKDDAYLDGEFITTVQQRGAAIIRAR-  233 (324)
T ss_pred             HHHHHHHHHHhCCChhhceEeEEEECCCC-CcccccccceecCCCCccCHHHHhcchhhHHHHHHHHHHhCHHHHHhcc-
Confidence            9999999999999999996 699999999 999999999886 4    1    22222  5789999999999999964 


Q ss_pred             cCCchhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCC-C--CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHH
Q 017551          239 GAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQ-V--TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCL  314 (369)
Q Consensus       239 g~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~-~--~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~  314 (369)
                       +|++.|++|.++++++++|+++.+ ++.+++++ +++|+ |  ++++|||+||++|++|++.+.++ +|+++|+++|++
T Consensus       234 -~~~t~~~ia~~~~~i~~ai~~~~~-~~~i~~vs~~~~g~~yg~~~~v~~s~P~~ig~g~~~~i~el-~L~~~E~~~l~~  310 (324)
T TIGR01758       234 -KLSSALSAAKAAVDQMHDWVLGTP-EGTFVSMGVYSDGSPYGVPKGLIFSFPVTCKNGEWKIVEGL-CVDDSSRKKLAL  310 (324)
T ss_pred             -CCCHHHHHHHHHHHHHHHHhcCCC-CCeEEEEEeecCCcccCCCCceEEEEEEEEcCCeEEEecCC-CCCHHHHHHHHH
Confidence             358999999999999999995543 33588887 78999 8  48999999999997777776665 999999999999


Q ss_pred             HHHHHHHHH
Q 017551          315 LHLCFQDWL  323 (369)
Q Consensus       315 ~~~~i~~~l  323 (369)
                      ++..+++..
T Consensus       311 s~~~lk~~~  319 (324)
T TIGR01758       311 TAKELEEER  319 (324)
T ss_pred             HHHHHHHHH
Confidence            996555444

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=100.00  E-value=2e-55  Score=428.70  Aligned_cols=292  Identities=23%  Similarity=0.297  Sum_probs=253.3

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCc-----EEEEEeCCC----chhHHHHhhcccC--CCeEEEEeCCCChhhhcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDT--GAVVRGFLGQPQLENALT   87 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~-----el~L~D~~~----~~g~~~dL~~~~~--~~~v~~~~~t~dl~~al~   87 (369)
                      ++.||+||||+|++|+++++.|..+++++     +|+|+|++.    +.++++|+.|+..  ..++..   +++++++++
T Consensus         1 ~~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~---~~~~~~~l~   77 (325)
T cd01336           1 EPIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVA---TTDPEEAFK   77 (325)
T ss_pred             CCeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCcee---cCCHHHHhC
Confidence            46799999999999999999999988764     999999954    5788899999762  223332   357779999


Q ss_pred             CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCChhHHHHHHHHHh-CCCCCCcEEEe
Q 017551           88 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKA-GTYDPKKLLGV  165 (369)
Q Consensus        88 ~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~i~ae~~~~~-~~~~~~kviG~  165 (369)
                      |||+||++||.|+++|++|.+++..|+++++++++.|.+++ |+++++++|||+|++|+++    ++. +++|+++ ||.
T Consensus        78 ~aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~----~k~~~~~~~~~-ig~  152 (325)
T cd01336          78 DVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPANTNALIL----LKYAPSIPKEN-FTA  152 (325)
T ss_pred             CCCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcHHHHHHHH----HHHcCCCCHHH-EEe
Confidence            99999999999999999999999999999999999999997 7999999999999999876    566 5787777 777


Q ss_pred             -chhcHHHHHHHHHHHhCCCCCCCc-eeEEeecCCCccccccccCCCC----CC-----CCHHH--HHHHHhhhccchhh
Q 017551          166 -TMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHAGVTILPLLSQVKPP----CS-----FTQEE--TEYLTNRIQNGGTE  232 (369)
Q Consensus       166 -t~Ld~~R~~~~la~~lgv~~~~V~-~~viG~hg~~~~vp~~S~~~~~----~~-----~~~~~--~~~l~~~v~~~~~e  232 (369)
                       |.||+.||++++|++++++|++|+ .+||||||+ +++|+||++++.    +.     +++++  ++++.+++++++++
T Consensus       153 gt~LDs~R~r~~la~~l~v~~~~v~~~~V~GeHG~-s~~~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~i~~~v~~~g~~  231 (325)
T cd01336         153 LTRLDHNRAKSQIALKLGVPVSDVKNVIIWGNHSS-TQYPDVNHATVELNGKGKPAREAVKDDAWLNGEFISTVQKRGAA  231 (325)
T ss_pred             eehHHHHHHHHHHHHHhCcChhhceEeEEEEcCCC-CeeeccccceeecCCCCccHHHHhcccchhHHHHHHHHHhhHHH
Confidence             899999999999999999999996 569999999 999999999886    31     22222  58899999999999


Q ss_pred             hhhhhccCCchhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC--CCccEEEEEEEEcCCCeEEEccCCCCCHHHH
Q 017551          233 VVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYES  309 (369)
Q Consensus       233 v~~~k~g~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~  309 (369)
                      |++.+  +|++.|++|.++++++++|++|.+ ++.+++++ +++|+|  ++++|||+||++|++|+++++++ +|+++|+
T Consensus       232 Ii~~~--~g~t~~~~a~~~~~i~~ail~~~~-~~~v~~vs~~~~g~yg~~~~v~~s~P~~ig~~Gv~~i~~~-~L~~~E~  307 (325)
T cd01336         232 VIKAR--KLSSAMSAAKAICDHVHDWWFGTP-EGEFVSMGVYSDGSYGVPEGLIFSFPVTCKNGKWKIVQGL-SIDDFSR  307 (325)
T ss_pred             HHHcc--ccchHHHHHHHHHHHHHHHHcCCC-CCeEEEEEEecCCCcCCCCceEEEEEEEEeCCEEEEecCC-CCCHHHH
Confidence            99963  579999999999999999999853 23488886 789999  58999999999999999999996 9999999


Q ss_pred             HHHHHHHHHHHHHH
Q 017551          310 GLFCLLHLCFQDWL  323 (369)
Q Consensus       310 ~~L~~~~~~i~~~l  323 (369)
                      ++|+++++.+++..
T Consensus       308 ~~l~~s~~~l~~e~  321 (325)
T cd01336         308 EKIDATAKELVEEK  321 (325)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999996555444

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=100.00  E-value=1.6e-54  Score=418.61  Aligned_cols=285  Identities=34%  Similarity=0.556  Sum_probs=253.5

Q ss_pred             EEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC--CCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           23 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        23 I~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~--~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      |+|||| |.||+++++.++++++. +|+|+|+++  +.+.++|+.|...  ....+... ++|+ ++++|||+||+++|.
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~-eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~~-t~d~-~~l~dADiVIit~g~   76 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELG-DVVLLDIVEGLPQGKALDISQAAPILGSDTKVTG-TNDY-EDIAGSDVVVITAGI   76 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCc-EEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEEE-cCCH-HHhCCCCEEEEecCC
Confidence            689999 99999999999999877 999999988  5778888888642  12233322 4565 679999999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEec-hhcHHHHHHHH
Q 017551           99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVRANTFV  177 (369)
Q Consensus        99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t-~Ld~~R~~~~l  177 (369)
                      |+++|++|.+++.+|++++++++++|+++||+++++++|||+|++++++    ++++++||+|+||+| .||+.|++++|
T Consensus        77 p~~~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~sNP~di~t~~~----~~~s~~~~~rviGlgt~lds~r~~~~l  152 (300)
T cd01339          77 PRKPGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVTNPLDVMTYVA----YKASGFPRNRVIGMAGVLDSARFRYFI  152 (300)
T ss_pred             CCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----HHHhCCCHHHEEEecchHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999998765    678899999999995 79999999999


Q ss_pred             HHHhCCCCCCCceeEEeecCCCccccccccCCCCC-C----CCHHHHHHHHhhhccchhhhhhhhccCCchhhHHHHHHH
Q 017551          178 AEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-S----FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAV  252 (369)
Q Consensus       178 a~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~-~----~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~s~A~a~~  252 (369)
                      |++|++++++|+++|+|+||+ +++|+||++++.+ +    +++++++++.+++++++++|++.| |+|+++|++|.+++
T Consensus       153 a~~l~v~~~~v~~~v~G~hg~-~~~~~~s~~~v~g~~~~~~~~~~~~~~~~~~v~~~~~~ii~~k-~~g~t~~~~a~~~~  230 (300)
T cd01339         153 AEELGVSVKDVQAMVLGGHGD-TMVPLPRYSTVGGIPLTELITKEEIDEIVERTRNGGAEIVNLL-KTGSAYYAPAAAIA  230 (300)
T ss_pred             HHHhCCCccceEEEEEeCCCC-cceecceecEECCEEHHHhcChHHHHHHHHHHHHHHHHHHhhc-CCCchhHHHHHHHH
Confidence            999999999999999999998 9999999998853 1    345568899999999999999987 78999999999999


Q ss_pred             HHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHH
Q 017551          253 KFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQD  321 (369)
Q Consensus       253 ~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~  321 (369)
                      +++++|+++.+   .+++++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|+++++.|++
T Consensus       231 ~i~~ail~~~~---~i~~~s~~~~g~yg~~~~~~s~P~~ig~~G~~~~~~l-~l~~~E~~~l~~s~~~l~~  297 (300)
T cd01339         231 EMVEAILKDKK---RVLPCSAYLEGEYGIKDIFVGVPVVLGKNGVEKIIEL-DLTDEEKEAFDKSVESVKE  297 (300)
T ss_pred             HHHHHHHcCCC---cEEEEEEEeccccCCCCeEEEEEEEEeCCeEEEEeCC-CCCHHHHHHHHHHHHHHHH
Confidence            99999999764   488887 789999 56999999999999999999996 9999999999999965543

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>PRK06223 malate dehydrogenase; Reviewed

Probab=100.00  E-value=4.8e-54  Score=416.33  Aligned_cols=291  Identities=31%  Similarity=0.547  Sum_probs=256.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCC--CeEEEEeCCCChhhhcCCCcEEEEc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG--AVVRGFLGQPQLENALTGMDLVIIP   95 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~--~~v~~~~~t~dl~~al~~ADiVii~   95 (369)
                      ++||+|||| |.+|+++++.++..++. +|+|+|+++  +++.++|+.|....  ...+.. .++|+ ++++|||+||++
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~-ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~-~~~d~-~~~~~aDiVii~   77 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELG-DVVLFDIVEGVPQGKALDIAEAAPVEGFDTKIT-GTNDY-EDIAGSDVVVIT   77 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCe-EEEEEECCCchhHHHHHHHHhhhhhcCCCcEEE-eCCCH-HHHCCCCEEEEC
Confidence            369999999 99999999999999877 999999987  67888898886421  122332 25676 679999999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHHH
Q 017551           96 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRAN  174 (369)
Q Consensus        96 ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~~  174 (369)
                      +|.|+++|++|.+++.+|++++++++++|++++|++|+|++|||+|++|+++    ++++++|++||||+ |.||+.|++
T Consensus        78 ~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~d~~~~~~----~~~s~~~~~~viG~gt~lds~r~~  153 (307)
T PRK06223         78 AGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVTNPVDAMTYVA----LKESGFPKNRVIGMAGVLDSARFR  153 (307)
T ss_pred             CCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----HHHhCCCcccEEEeCCCcHHHHHH
Confidence            9999999999999999999999999999999999999999999999999765    67889999999999 579999999


Q ss_pred             HHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCC-C----CCHHHHHHHHhhhccchhhhhhhhccCCchhhHHHH
Q 017551          175 TFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-S----FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAY  249 (369)
Q Consensus       175 ~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~-~----~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~s~A~  249 (369)
                      ++||++++++|++|+++|+|+||+ +++|+||++++.+ +    ++++.++++.+++++++++|++.. ++|++.|++|.
T Consensus       154 ~~la~~l~v~~~~v~~~viGehg~-s~~p~~S~~~v~g~~~~~~~~~~~~~~l~~~v~~~~~~ii~~~-~kg~t~~~~A~  231 (307)
T PRK06223        154 TFIAEELNVSVKDVTAFVLGGHGD-SMVPLVRYSTVGGIPLEDLLSKEKLDEIVERTRKGGAEIVGLL-KTGSAYYAPAA  231 (307)
T ss_pred             HHHHHHhCcChhhCcccEEcCCCC-cceEchhhCEECCEEHHHhCChHHHHHHHHHHHHHHHHHHhhc-ccCChhHHHHH
Confidence            999999999999999999999998 9999999998743 1    445557899999999999999964 57899999999


Q ss_pred             HHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHHHH
Q 017551          250 AAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWLG  324 (369)
Q Consensus       250 a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~l~  324 (369)
                      ++++++++++.|.+   .+++++ +++|+| .++++||+||++|++|+++++++ +|+++|+++|++++..+++.++
T Consensus       232 ~~~~ii~ail~~~~---~~~~~~v~~~g~yg~~~~~~s~P~~i~~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~  304 (307)
T PRK06223        232 SIAEMVEAILKDKK---RVLPCSAYLEGEYGVKDVYVGVPVKLGKNGVEKIIEL-ELDDEEKAAFDKSVEAVKKLIE  304 (307)
T ss_pred             HHHHHHHHHHcCCC---cEEEEEEEecCcCCCCCeEEEeEEEEeCCeEEEEeCC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999998754   477775 789988 68999999999999999999995 9999999999999966665554

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=100.00  E-value=3.2e-54  Score=417.91  Aligned_cols=290  Identities=25%  Similarity=0.424  Sum_probs=255.5

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC----chhHHHHhhcccC--CCeEEEEeCCCChhhhcCCCcEEEE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN----TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVII   94 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~----~~g~~~dL~~~~~--~~~v~~~~~t~dl~~al~~ADiVii   94 (369)
                      |||+|+||+|.+|+++++.++..++..+|+|+|+++    +++.++|+.|...  ....+.. .++|+ +++++||+||+
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~-~~~d~-~~l~~aDiVii   78 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIK-ISSDL-SDVAGSDIVII   78 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEE-ECCCH-HHhCCCCEEEE
Confidence            699999998999999999999999988999999954    5788999998642  1222332 24565 67999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHH
Q 017551           95 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA  173 (369)
Q Consensus        95 ~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~  173 (369)
                      ++|.|+++|++|.+++..|+++++++++.|.+++|++++++++||+|++|+++    ++.+++|++|+||+ |.||++|+
T Consensus        79 tag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~npvd~~t~~~----~~~~g~~~~~viG~gt~LDs~R~  154 (309)
T cd05294          79 TAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTNPVDVMTYKA----LKESGFDKNRVFGLGTHLDSLRF  154 (309)
T ss_pred             ecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHH----HHhcCCCHHHEeeccchHHHHHH
Confidence            99999999999999999999999999999999999999999999999999765    67888999999999 68999999


Q ss_pred             HHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCCC-------CCHHHHHHHHhhhccchhhhhhhhccCCchhhH
Q 017551          174 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCS-------FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLS  246 (369)
Q Consensus       174 ~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~~-------~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~s  246 (369)
                      +++||+++++++++|+++|+||||+ +++|+||++++.+.       ..+.+++++.++++++|++|++.   +|++.||
T Consensus       155 ~~~la~~l~v~~~~v~~~viGeHg~-s~~~~~S~~~i~g~~~~~~~~~~~~~~~~i~~~v~~~g~~i~~~---kg~t~~~  230 (309)
T cd05294         155 KVAIAKHFNVHISEVHTRIIGEHGD-SMVPLISSTSIGGIPIKRFPEYKDFDVEKIVETVKNAGQNIISL---KGGSEYG  230 (309)
T ss_pred             HHHHHHHHCcChHHeEEEEEecCCC-ceEeeeeecEECCEEHHHhhcccHHHHHHHHHHHHHHHHHHHHh---cCCchhh
Confidence            9999999999999999999999999 99999999987531       22445789999999999999995   4778999


Q ss_pred             HHHHHHHHHHHHHhccCCCCceeEEE-eecCCC--CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 017551          247 MAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWL  323 (369)
Q Consensus       247 ~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~l  323 (369)
                      +|.++++++++|++|.+   .+++++ +++|+|  .+++++|+||++|++|+++++++ +|+++|+++|++++..|++.+
T Consensus       231 ~a~~~~~ii~ail~~~~---~v~~vsv~~~g~~~~~~~~~~svP~~ig~~Gv~~i~~l-~l~~~E~~~l~~s~~~i~~~~  306 (309)
T cd05294         231 PASAISNLVRTIANDER---RILTVSTYLEGEIDGIRDVCIGVPVKLGKNGIEEIVPI-EMDDDEREAFRKSAEIVKKYT  306 (309)
T ss_pred             HHHHHHHHHHHHHCCCC---eEEEEEEEECCccCCCCCeEEEeEEEEcCCccEEEeCC-CCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999998876   377775 789987  34899999999999999999996 999999999999997666554


Q ss_pred             H
Q 017551          324 G  324 (369)
Q Consensus       324 ~  324 (369)
                      +
T Consensus       307 ~  307 (309)
T cd05294         307 R  307 (309)
T ss_pred             h
Confidence            3

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PLN00135 malate dehydrogenase

Probab=100.00  E-value=2.4e-53  Score=410.13  Aligned_cols=261  Identities=21%  Similarity=0.309  Sum_probs=229.6

Q ss_pred             EEEEEeCCC----chhHHHHhhcccC--CCeEEEEeCCCChhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 017551           48 VLHLYDVVN----TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLC  121 (369)
Q Consensus        48 el~L~D~~~----~~g~~~dL~~~~~--~~~v~~~~~t~dl~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~  121 (369)
                      .|+|+|+++    ++|+++||.|+..  ...+..   +++.+++++|||+||++||.||+|||+|.+++..|++++++++
T Consensus        15 ~l~L~D~~~~~~~a~g~~~Dl~da~~~~~~~i~~---~~~~y~~~~daDiVVitAG~~~k~g~sR~dll~~N~~I~~~i~   91 (309)
T PLN00135         15 ILHMLDIPPAAEALNGVKMELIDAAFPLLKGVVA---TTDVVEACKGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQA   91 (309)
T ss_pred             EEEEecCcccccchhhHHHHHHhhhHHhcCCcEe---cCCHHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHH
Confidence            899999976    6899999999872  123332   3454689999999999999999999999999999999999999


Q ss_pred             HHHhhh-CCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHHHHHHHHHhCCCCCCC-ceeEEeecCC
Q 017551          122 EGIAKC-CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDV-DVPVVGGHAG  198 (369)
Q Consensus       122 ~~i~~~-~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~~~~la~~lgv~~~~V-~~~viG~hg~  198 (369)
                      ++|.++ +|+++++++|||+|++|+++    ++.+++|++|+||. |.||++|||++||+++|+++++| +++||||||+
T Consensus        92 ~~i~~~~~p~aivivvsNPvDv~t~~~----~~~sg~~~~~vig~gt~LDsaR~r~~la~~l~v~~~~V~~~~VlGeHG~  167 (309)
T PLN00135         92 SALEKHAAPDCKVLVVANPANTNALIL----KEFAPSIPEKNITCLTRLDHNRALGQISERLGVPVSDVKNVIIWGNHSS  167 (309)
T ss_pred             HHHHHhcCCCeEEEEeCCcHHHHHHHH----HHHcCCCCccEEEeeehHHHHHHHHHHHHHhCcChhhceeeEEEEcCCC
Confidence            999996 89999999999999999766    67889999999999 89999999999999999999999 7999999999


Q ss_pred             CccccccccCCC----CCC-----CCHHH--HHHHHhhhccchhhhhhhhccCCchhhHHHHHHHHHHHHHHhccCCCCc
Q 017551          199 VTILPLLSQVKP----PCS-----FTQEE--TEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAG  267 (369)
Q Consensus       199 ~~~vp~~S~~~~----~~~-----~~~~~--~~~l~~~v~~~~~ev~~~k~g~g~~~~s~A~a~~~li~ai~~~~~~~~~  267 (369)
                       +++|+||++++    .+.     +.+++  .+++.+++++++++|++.+  +|+|+||+|.++++++++|+++++ ++.
T Consensus       168 -s~v~~~S~a~v~~~~~g~p~~e~~~~~~~~~~~i~~~v~~~g~~Ii~~~--kg~t~~~ia~a~~~iv~ai~~~~~-~~~  243 (309)
T PLN00135        168 -TQYPDVNHATVKTPSGEKPVRELVADDAWLNGEFITTVQQRGAAIIKAR--KLSSALSAASSACDHIRDWVLGTP-EGT  243 (309)
T ss_pred             -ceeeccccceEecCCCCcCHHHHhCchhhHHHHHHHHHHHHHHHHHHcc--CccHHHHHHHHHHHHHHHHHhCCc-CCe
Confidence             99999999988    431     23333  5789999999999999963  589999999999999999999642 234


Q ss_pred             eeEEE-eecCCC--CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHH
Q 017551          268 VVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQ  320 (369)
Q Consensus       268 v~~~~-~~~g~~--~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~  320 (369)
                      +++++ +++|+|  ++++|||+||++|++|++.++++ +|+++|+++|++++..++
T Consensus       244 v~~vsv~~~g~YGi~~~v~~s~P~vlg~~gve~v~~l-~L~~~E~~~l~~S~~~lk  298 (309)
T PLN00135        244 WVSMGVYSDGSYGVPPGLIYSFPVTCEKGEWSIVQGL-SIDEFSRKKMDATAKELK  298 (309)
T ss_pred             EEEEEEEecCccCCcCCeEEEEEEEEECCEEEEecCC-CCCHHHHHHHHHHHHHHH
Confidence            88886 789999  48999999999999999999896 999999999999995444

>cd05295 MDH_like Malate dehydrogenase-like

Probab=100.00  E-value=1.4e-53  Score=426.81  Aligned_cols=285  Identities=15%  Similarity=0.117  Sum_probs=245.9

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCC-----cEEEEEeCC--C--chhHHHHhhcccC--CCeEEEEeCCCChhhh
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLV-----SVLHLYDVV--N--TPGVTADISHMDT--GAVVRGFLGQPQLENA   85 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~-----~el~L~D~~--~--~~g~~~dL~~~~~--~~~v~~~~~t~dl~~a   85 (369)
                      .+++.+|+|+||+|.+|+++.+.++....+     -.|+|+|+.  .  ++|+++||.|+.+  ...+...  +++ +++
T Consensus       120 ~~~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~--~~~-~ea  196 (452)
T cd05295         120 KINPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT--TDL-DVA  196 (452)
T ss_pred             CCCceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE--ECC-HHH
Confidence            456789999999999999999999985432     279999994  3  7899999999873  1234443  234 689


Q ss_pred             cCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC--CeEEEEecCCCCChhHHHHHHHHHhC-CCCCCcE
Q 017551           86 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP--NATVNLISNPVNSTVPIAAEVFKKAG-TYDPKKL  162 (369)
Q Consensus        86 l~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p--~a~viv~tNPv~~~t~i~ae~~~~~~-~~~~~kv  162 (369)
                      ++|||+||+++|.||+|||+|.|++..|++++++++++|.+++|  +++++++|||+|++|+++    ++.+ ++|++||
T Consensus       197 ~~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tNPvD~~t~i~----~k~apgiP~~rV  272 (452)
T cd05295         197 FKDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTFLNLKTSIL----IKYAPSIPRKNI  272 (452)
T ss_pred             hCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHH----HHHcCCCCHHHE
Confidence            99999999999999999999999999999999999999999999  899999999999999876    4555 9999999


Q ss_pred             EEechhcHHHHHHHHHHHhCCCCCCC-ceeEEeecCCCccccccccCCCCC------------C-----CCHHH--HHHH
Q 017551          163 LGVTMLDVVRANTFVAEVLGLDPRDV-DVPVVGGHAGVTILPLLSQVKPPC------------S-----FTQEE--TEYL  222 (369)
Q Consensus       163 iG~t~Ld~~R~~~~la~~lgv~~~~V-~~~viG~hg~~~~vp~~S~~~~~~------------~-----~~~~~--~~~l  222 (369)
                      ||+++||++|++++||+++|+++++| +++||||||+ +++|+||++++.+            .     +.+++  .+++
T Consensus       273 ig~gtlds~R~r~~LA~kl~V~~~~V~~~~VwGeHG~-sqvpd~S~a~V~G~~~a~~~p~~~~~pl~e~i~d~~w~~~~~  351 (452)
T cd05295         273 IAVARLQENRAKALLARKLNVNSAGIKDVIVWGNIGG-NTYIDLSKARVYRYDSAIWGPPNYSRPVLELVHDSKWINGEF  351 (452)
T ss_pred             EEecchHHHHHHHHHHHHhCcCHHHceeeEEEEccCC-ceeeeeeEEEEcccccccccccccCccHHHHhcchhhhHHHH
Confidence            99987889999999999999999999 6799999999 9999999998743            1     22333  2567


Q ss_pred             HhhhccchhhhhhhhccCCchhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC--CCccEEEEEEEEcCCCeEEEc
Q 017551          223 TNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIF  299 (369)
Q Consensus       223 ~~~v~~~~~ev~~~k~g~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~lg~~Gv~~~~  299 (369)
                      .+.+++++.   +   ++|++.||+|.|+++++++|++|++.. .+++++ +++|+|  |++++||+||++|++|++.+.
T Consensus       352 ~~~v~~rg~---~---rkgsT~~siA~A~~~iv~ail~~t~~~-~ilsvsv~sdG~YGip~gv~~S~Pviig~~Gve~V~  424 (452)
T cd05295         352 VATLKSLSS---S---LNHEAAISPAHAIATTLSYWYHGSPPG-EIFSLGVISEGWYGIPEGIVFSMPVKFQNGSWEVVT  424 (452)
T ss_pred             HHHHHHHHH---h---ccCChHHHHHHHHHHHHHHHHhCCCCC-eEEEEEEeeccccCCcCCEEEEEEEEEeCCeEEEEe
Confidence            777888777   2   578999999999999999999998532 377786 789999  689999999999999999999


Q ss_pred             cCCCCCHHHHHHHHHHHH
Q 017551          300 QLGPLNEYESGLFCLLHL  317 (369)
Q Consensus       300 ~~~~L~~~E~~~L~~~~~  317 (369)
                      ++ +|+++|+++|++++.
T Consensus       425 ~L-~L~e~E~~kL~~S~~  441 (452)
T cd05295         425 DL-ELSEILREVLKRITS  441 (452)
T ss_pred             CC-CCCHHHHHHHHHHHH
Confidence            96 999999999998883

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01756 LDH_protist lactate dehydrogenase

Probab=100.00  E-value=7.5e-52  Score=400.65  Aligned_cols=266  Identities=20%  Similarity=0.244  Sum_probs=228.7

Q ss_pred             EEEEEeCCC----chhHHHHhhcccC-CCeEEEEeCCCChhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 017551           48 VLHLYDVVN----TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCE  122 (369)
Q Consensus        48 el~L~D~~~----~~g~~~dL~~~~~-~~~v~~~~~t~dl~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~  122 (369)
                      .|+|+|+++    ++|+++||.|+.+ ..+....  ++|++++++|||+||++||.||+|||+|.+++..|+++++++++
T Consensus        17 ~l~L~D~~~~~~~a~g~a~Dl~d~~~~~~~~~i~--~~~~~~~~~daDiVVitaG~~~k~g~tR~dll~~N~~I~~~i~~   94 (313)
T TIGR01756        17 CLHLLEIPPALNRLEALAMELEDCAFPNLAGTIV--TTKLEEAFKDIDCAFLVASVPLKPGEVRADLLTKNTPIFKATGE   94 (313)
T ss_pred             EEEEecCCCccchhHhHHHHHHHhccccCCceEe--cCCHHHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHH
Confidence            899999977    6899999999872 1222222  45777899999999999999999999999999999999999999


Q ss_pred             HHhhhCCC-eEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHHHHHHHHHhCCCCCCCce-eEEeecCCC
Q 017551          123 GIAKCCPN-ATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDV-PVVGGHAGV  199 (369)
Q Consensus       123 ~i~~~~p~-a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~~~~la~~lgv~~~~V~~-~viG~hg~~  199 (369)
                      +|.+++|+ +++|++|||+|++|+++.   ++.+++|++ +||+ |.||++||+++||+++|++|++|+. +||||||+ 
T Consensus        95 ~i~~~a~~~~ivivvtNPvDv~t~v~~---~~~sg~p~~-vig~gt~LDsaR~r~~la~~l~v~~~~V~~~~V~GeHG~-  169 (313)
T TIGR01756        95 ALSEYAKPTVKVLVIGNPVNTNCLVAM---LHAPKLSAE-NFSSLCMLDHNRAVSRIASKLKVPVDHIYHVVVWGNHAE-  169 (313)
T ss_pred             HHHhhCCCCeEEEEeCCchHHHHHHHH---HHcCCCCHH-HEEecccHHHHHHHHHHHHHhCcChhheeeeEEEECCCC-
Confidence            99999955 889999999999997652   588999998 9999 8999999999999999999999965 59999999 


Q ss_pred             ccccccccCCC--CC-C------CCHH-HHHHHHhhhccchhhhhhhhccCCchhhHHH-HHHHHHHHHHHhccCCCCce
Q 017551          200 TILPLLSQVKP--PC-S------FTQE-ETEYLTNRIQNGGTEVVEAKAGAGSATLSMA-YAAVKFADACLRGLRGDAGV  268 (369)
Q Consensus       200 ~~vp~~S~~~~--~~-~------~~~~-~~~~l~~~v~~~~~ev~~~k~g~g~~~~s~A-~a~~~li~ai~~~~~~~~~v  268 (369)
                      +++|+||++++  .+ +      ++++ .++++.+++++++++|++.   ||+|+|++| .++++++++|++|++. +.+
T Consensus       170 s~vp~~S~~~V~~~G~~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~---kg~t~~~~~a~ai~~iv~ail~~~~~-~~i  245 (313)
T TIGR01756       170 SMVADLTHAEFTKNGKHQKVFDELCRDYPEPDFFEVIAQRAWKILEM---RGFTSAASPVKASLQHMKAWLFGTRP-GEV  245 (313)
T ss_pred             ceeecccccEEecCCeehhHhhhcCcHhHHHHHHHHHHHHHHHHHhC---cCCcchHHHHHHHHHHHHHHhcCCCC-CeE
Confidence            99999999988  43 1      2221 3678999999999999994   589999977 6999999999997653 358


Q ss_pred             eEEE-eec--CCC--CCccEEEEEEEEcCCCeEEEcc-CCCCCHHHHHHHHHHHHHHHHHHHh
Q 017551          269 VECA-FVA--SQV--TELPFFASKVRLGRQGAEEIFQ-LGPLNEYESGLFCLLHLCFQDWLGE  325 (369)
Q Consensus       269 ~~~~-~~~--g~~--~~~~~~svPv~lg~~Gv~~~~~-~~~L~~~E~~~L~~~~~~i~~~l~~  325 (369)
                      ++++ +++  |+|  +++++||+||++|++|++++++ + +|+++|+++|++++..|+.+.+.
T Consensus       246 ~pvsv~l~~~g~YGi~~~v~~s~P~vig~~Gv~~ive~l-~L~~~E~~~l~~Sa~~l~~e~~~  307 (313)
T TIGR01756       246 LSMGIPVPEGNPYGIKPGVIFSFPCTVDEDGKVHVVENF-ELNPWLKTKLAQTEKDLFEERET  307 (313)
T ss_pred             EEEEEEecCCCccCCCCCEEEEEEEEEeCCceEEEcCCC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            8887 575  388  4799999999999999999999 6 99999999999999766555433

This model represents a family of protist lactate dehydrogenases which have aparrently evolved from a recent protist malate dehydrogenase ancestor. Lactate dehydrogenase converts the hydroxyl at C-2 of lactate to a carbonyl in the product, pyruvate. The preference of this enzyme for NAD or NADP has not been determined. A critical residue in malate dehydrogenase, arginine-91 (T. vaginalis numbering) has been mutated to a leucine, eliminating the positive charge which complemeted the carboxylate in malate which is absent in lactate. Several other more subtle changes are proposed to make the active site smaller to accomadate the less bulky lactate molecule.

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=100.00  E-value=9.8e-51  Score=385.30  Aligned_cols=251  Identities=28%  Similarity=0.428  Sum_probs=226.1

Q ss_pred             EEEEcCCCccHHHHHHHHHhCC--CCcEEEEEeCCC--chhHHHHhhcccCCC-eEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           23 VAILGAAGGIGQPLAMLMKINP--LVSVLHLYDVVN--TPGVTADISHMDTGA-VVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        23 I~IiGA~G~vGs~la~~l~~~~--~~~el~L~D~~~--~~g~~~dL~~~~~~~-~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      |+||||+|.+|+++++.|++.+  ...+|+|||+++  +++.++||.|..... ..+... ++|++++++|||+||+++|
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~-~~d~~~~~~~aDiVv~t~~   79 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSI-TDDPYEAFKDADVVIITAG   79 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEE-CCchHHHhCCCCEEEECCC
Confidence            6899998999999999999999  778999999987  688999999986432 334433 6788899999999999999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEechhcHHHHHHHH
Q 017551           98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFV  177 (369)
Q Consensus        98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t~Ld~~R~~~~l  177 (369)
                      .|+++|++|.+++.+|++++++++++|+++||++|++++|||+|++|+++    ++++++|++|+||+|++|+.|+++++
T Consensus        80 ~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~tNP~d~~t~~~----~~~sg~~~~kviG~~~ld~~r~~~~l  155 (263)
T cd00650          80 VGRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVSNPVDIITYLV----WRYSGLPKEKVIGLGTLDPIRFRRIL  155 (263)
T ss_pred             CCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----HHHhCCCchhEEEeecchHHHHHHHH
Confidence            99999999999999999999999999999999999999999999998765    77889999999999669999999999


Q ss_pred             HHHhCCCCCCCceeEEeecCCCccccccccCCCCCCCCHHHHHHHHhhhccchhhhhhhhccCCchhhHHHHHHHHHHHH
Q 017551          178 AEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADA  257 (369)
Q Consensus       178 a~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~s~A~a~~~li~a  257 (369)
                      |+++|+++++|+++|||+||+ +++|+||+++                                     +|.++++++++
T Consensus       156 a~~l~v~~~~v~~~v~G~hg~-~~~~~~s~~~-------------------------------------~a~~~~~ii~a  197 (263)
T cd00650         156 AEKLGVDPDDVKVYILGEHGG-SQVPDWSTVR-------------------------------------IATSIADLIRS  197 (263)
T ss_pred             HHHhCCCccceEEEEEEcCCC-ceEeccccch-------------------------------------HHHHHHHHHHH
Confidence            999999999999999999999 8999999765                                     67899999999


Q ss_pred             HHhccCCCCceeEEE-eecCCC--CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHH
Q 017551          258 CLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQ  320 (369)
Q Consensus       258 i~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~  320 (369)
                      |++|.+   .+++++ +++|+|  +++++||+||++|++|+++++++ +|+++|+++|+++++.++
T Consensus       198 i~~~~~---~~~~v~v~~~g~ygi~~~~~~s~P~~i~~~Gi~~~~~~-~l~~~e~~~l~~s~~~~~  259 (263)
T cd00650         198 LLNDEG---EILPVGVRNNGQIGIPDDVVVSVPCIVGKNGVEEPIEV-GLTDFELEKLQKSADTLK  259 (263)
T ss_pred             HHcCCC---EEEEEEEEeCCccCCcCCEEEEEEEEEeCCceEEEecC-CCCHHHHHHHHHHHHHHH
Confidence            999854   477775 789998  58999999999999999998985 999999999999985444

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>KOG1496 consensus Malate dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=2.2e-44  Score=326.31  Aligned_cols=292  Identities=24%  Similarity=0.339  Sum_probs=258.6

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCC-----CCcEEEEEeCCC----chhHHHHhhcccCCCeEEEEeCCCChhhhcCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINP-----LVSVLHLYDVVN----TPGVTADISHMDTGAVVRGFLGQPQLENALTG   88 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~-----~~~el~L~D~~~----~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~   88 (369)
                      +.+.+|.|.||+|.||+++.+.++...     .-..|+|+|+..    +.|+.|+|+|+.+ +.++....++|..++|+|
T Consensus         2 ~epirVlVtGAAGqI~ysll~~ia~G~vfG~dQPiiL~lLdi~~~~~~LegV~mELqD~a~-PlL~~Vvattd~~~afkd   80 (332)
T KOG1496|consen    2 KEPIRVLVTGAAGQIGYSLLPMIARGIVFGKDQPIILHLLDIPPMMSVLEGVKMELQDCAL-PLLKGVVATTDEVEAFKD   80 (332)
T ss_pred             CCceEEEeecccchhhHHHHHHHcCceeecCCCceEEEeeCCchHHHHHHHHHHHHHhhhh-hHHHhhhcccChhhhhcc
Confidence            467899999999999999999997631     123899999987    6899999999985 555544447888999999


Q ss_pred             CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEech
Q 017551           89 MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTM  167 (369)
Q Consensus        89 ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t~  167 (369)
                      .|+.|+.+++||++||+|.|++..|..|++..+.++++|+ |+.+++++.||+|..+.++.   +.++.+|.+++-.+|.
T Consensus        81 v~~ailvGa~PR~eGMERkDll~~NvkIfk~Qg~AL~k~A~~~~KVlVVgNPaNTNali~~---k~ApsIP~kNfs~lTR  157 (332)
T KOG1496|consen   81 VDVAILVGAMPRREGMERKDLLSANVKIFKSQGAALEKYAKPNVKVLVVGNPANTNALILK---KFAPSIPEKNFSALTR  157 (332)
T ss_pred             CcEEEEeccccCcccchhhhHHhhcceeehhhhHHHHHhcCCCceEEEecCccccchhHHh---hhCCCCchhcchhhhh
Confidence            9999999999999999999999999999999999999998 89999999999999988775   6788999999999999


Q ss_pred             hcHHHHHHHHHHHhCCCCCCC-ceeEEeecCCCccccccccCCCCCC---------CCHHHH--HHHHhhhccchhhhhh
Q 017551          168 LDVVRANTFVAEVLGLDPRDV-DVPVVGGHAGVTILPLLSQVKPPCS---------FTQEET--EYLTNRIQNGGTEVVE  235 (369)
Q Consensus       168 Ld~~R~~~~la~~lgv~~~~V-~~~viG~hg~~~~vp~~S~~~~~~~---------~~~~~~--~~l~~~v~~~~~ev~~  235 (369)
                      ||.+|+...||.++|++.++| ++.|||+|+. |++|+..++++...         +.|..|  .++.+.||+||.-|++
T Consensus       158 LDhNRA~~QlA~klgv~~~~VkNviIWGNHSs-TQyPD~~hA~V~~~~~~~~v~e~v~d~~wL~g~Fi~tVQkRGaavi~  236 (332)
T KOG1496|consen  158 LDHNRALAQLALKLGVPVSDVKNVIIWGNHSS-TQYPDVNHATVNTNGGEKPVKEAVKDDAWLQGEFIETVQKRGAAVIK  236 (332)
T ss_pred             hchhhHHHHHHHhhCCchhhcceeEEeccccc-ccCCCccceeeeccCCcccHHHHhccchhhccchhhHHHhcchHhhh
Confidence            999999999999999999999 6899999998 99999999988421         455566  5799999999999998


Q ss_pred             hhccCCchhhHHHHHHHHHHHHHHhccCCCCceeEEEeecCCC--CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHH
Q 017551          236 AKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFC  313 (369)
Q Consensus       236 ~k~g~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~~~~g~~--~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~  313 (369)
                      ++  +-|+.+|.|.+++++++.|+.+++...++...++.+|.|  |++..||+||++ ++|-|++++..+++++-++++.
T Consensus       237 ar--k~SSA~SaA~aacDhi~dw~~gTpeG~fvSmgV~sDGsYgip~gli~SfPv~~-k~g~wkiVqgl~iddf~r~km~  313 (332)
T KOG1496|consen  237 AR--KLSSAMSAAKAACDHIRDWWFGTPEGTFVSMGVYSDGSYGIPDGLIFSFPVTI-KNGDWKIVQGLPIDDFSREKMD  313 (332)
T ss_pred             hh--hhhhhhhHHHhHhhhhhheecCCCCccEEEEeeecCCCCCCCCCeEEEcceEe-cCCceEEEcCcchhHHHHHhhh
Confidence            64  568899999999999999999998776555556899999  899999999999 7899999987799999999999


Q ss_pred             HHHH
Q 017551          314 LLHL  317 (369)
Q Consensus       314 ~~~~  317 (369)
                      ..++
T Consensus       314 ~t~~  317 (332)
T KOG1496|consen  314 LTAK  317 (332)
T ss_pred             hhHH
Confidence            8883

>cd05197 GH4_glycoside_hydrolases Glycoside Hydrases Family 4

Probab=100.00  E-value=5.6e-32  Score=272.03  Aligned_cols=274  Identities=21%  Similarity=0.242  Sum_probs=191.3

Q ss_pred             CEEEEEcCCCccHHHHHHH----HHhCC---CCcEEEEEeCCC-chhHHHHhhccc---CCCeEEEEeCCCChhhhcCCC
Q 017551           21 FKVAILGAAGGIGQPLAML----MKINP---LVSVLHLYDVVN-TPGVTADISHMD---TGAVVRGFLGQPQLENALTGM   89 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~----l~~~~---~~~el~L~D~~~-~~g~~~dL~~~~---~~~~v~~~~~t~dl~~al~~A   89 (369)
                      +||+|||| |+   ++++.    |.+.+   ..+||+|+|+++ ....+..+.+..   ....+++.. |+|+++|++||
T Consensus         1 ~KI~iIGg-GS---~~tp~li~~l~~~~~~l~~~ei~L~Did~~Rl~~v~~l~~~~~~~~g~~~~v~~-ttD~~~Al~gA   75 (425)
T cd05197           1 VKIAIIGG-GS---SFTPELVSGLLKTPEELPISEVTLYDIDEERLDIILTIAKRYVEEVGADIKFEK-TMDLEDAIIDA   75 (425)
T ss_pred             CEEEEECC-ch---HhHHHHHHHHHcChhhCCCCEEEEEcCCHHHHHHHHHHHHHHHHhhCCCeEEEE-eCCHHHHhCCC
Confidence            69999999 74   45543    33333   368999999998 222233332221   234566544 78999999999


Q ss_pred             cEEEEcC---C---------CCCCCCC---C-----HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHH
Q 017551           90 DLVIIPA---G---------VPRKPGM---T-----RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE  149 (369)
Q Consensus        90 DiVii~a---g---------~p~k~g~---~-----r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae  149 (369)
                      ||||.+.   |         +|.|+|.   +     ......+|+++++++++.|+++||+||+|++|||++++|+++  
T Consensus        76 DfVi~~irvGg~~~r~~De~Iplk~G~~gqeT~G~GG~~~alrni~ii~~i~~~i~~~~P~a~lin~TNP~di~t~a~--  153 (425)
T cd05197          76 DFVINQFRVGGLTYREKDEQIPLKYGVIGQETVGPGGTFSGLRQIPYVLDIARKXEKLSPDAWYLNFTNPAGEVTEAV--  153 (425)
T ss_pred             CEEEEeeecCChHHHHHHHhHHHHcCcccccccCcchhhhhhhhHHHHHHHHHHHHHhCCCcEEEecCChHHHHHHHH--
Confidence            9999983   3         2556652   2     467789999999999999999999999999999999998654  


Q ss_pred             HHHHhCCCCCCcEEEechhcHHHHHHHHHHHhCCCCCCCceeEEe-ecCCCccccccccCCC------------------
Q 017551          150 VFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG-GHAGVTILPLLSQVKP------------------  210 (369)
Q Consensus       150 ~~~~~~~~~~~kviG~t~Ld~~R~~~~la~~lgv~~~~V~~~viG-~hg~~~~vp~~S~~~~------------------  210 (369)
                        ++.  +|+.|+||+|+. +.|+++++|+.+|+++++|+++++| ||+.     +||..++                  
T Consensus       154 --~~~--~p~~rviG~c~~-~~r~~~~ia~~lgv~~~~v~~~v~GlnHg~-----~~s~~~~~G~~l~p~l~~~~~~~~~  223 (425)
T cd05197         154 --RRY--VPPEKAVGLCNV-PIGVMEIVAKLLGESEEKVDWQYAGLNHGI-----WLNRVRYNGGDVTPKLDEWVEEKSK  223 (425)
T ss_pred             --HHh--CCCCcEEEECCC-HHHHHHHHHHHhCCCHHHeEEEEEeccCeE-----eeEeEEECCeecHHHHHHHHhccCc
Confidence              665  477899999887 8999999999999999999999999 9984     3332211                  


Q ss_pred             --------------------------CCC------CCH----H-------------HHHHHHhhhccchhhhhh-----h
Q 017551          211 --------------------------PCS------FTQ----E-------------ETEYLTNRIQNGGTEVVE-----A  236 (369)
Q Consensus       211 --------------------------~~~------~~~----~-------------~~~~l~~~v~~~~~ev~~-----~  236 (369)
                                                ++.      +.+    +             +..+..+++.+....+..     .
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~g~~p~~Yl~yy~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~~~~~~~~~~~~  303 (425)
T cd05197         224 DWKTENPFVDQLSPAAIDFYRFYGVLPNPYLRYYLSWDKXRKLEADKEITWKTRADEVGKVEKELFEVYKFIKENPSVVE  303 (425)
T ss_pred             cccccccccccccchHHHHHHhCCCcccCCccccCccchhhhhhHHhhcccCccHHHHHHHHHHHHHHHhhhhhcCChhh
Confidence                                      000      000    0             000111111110000000     0


Q ss_pred             hccCCchhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC---CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHH
Q 017551          237 KAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLF  312 (369)
Q Consensus       237 k~g~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L  312 (369)
                      ...++.+.+  +..++++++||++|.+.   ++.++ .++|.+   |+|.++++||+|+++|+.++.. ++|++..++++
T Consensus       304 ~~~r~~~~~--~e~a~~ii~ai~~~~~~---~~~vNv~N~G~I~nLp~d~vVEvp~~v~~~Gi~P~~v-g~lp~~~~~Li  377 (425)
T cd05197         304 LIKRGGRKY--SEAAIPLIRALLNDNGA---RFVVNTRNNGAIANIDDDVVVEVPCLVDKNGPHPIKV-GPLDRFVKGLL  377 (425)
T ss_pred             hhhcCCccc--HHHHHHHHHHHHcCCCe---EEEEECCCCCCCCCCCCCCEEEEeEEEcCCCceeccc-CCCCHHHHHHH
Confidence            001123334  47889999999998764   44444 688886   8999999999999999999775 69999988888


Q ss_pred             HHHHH
Q 017551          313 CLLHL  317 (369)
Q Consensus       313 ~~~~~  317 (369)
                      +.-..
T Consensus       378 ~~~~~  382 (425)
T cd05197         378 RQRKM  382 (425)
T ss_pred             HHHHH
Confidence            85543

Glycoside hydrolases cleave glycosidic bonds to release smaller sugars from oligo- or polysaccharides. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by GH4 glycoside hydrolases. Other organisms (such as archaea and Thermotoga maritima) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. GH4 family members include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. They require two cofactors, NAD+ and a divalent metal (Mn2+, Ni2+, Mg2+), for activity. Some also require reducing conditions. GH4 glycoside hydrolases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families in

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=100.00  E-value=5.6e-33  Score=240.09  Aligned_cols=139  Identities=38%  Similarity=0.602  Sum_probs=124.0

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      |||+||||+|.||+++++.|+++++++||+|+|+++  ++|+++||+|+.............+ +++++|||+||+++|.
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~-~~~~~~aDivvitag~   79 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGD-YEALKDADIVVITAGV   79 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESS-GGGGTTESEEEETTST
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccccc-ccccccccEEEEeccc
Confidence            699999999999999999999999999999999997  7999999999875333332222234 6899999999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEE
Q 017551           99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  164 (369)
Q Consensus        99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG  164 (369)
                      ||+||++|.+++..|+++++++++++.+++|+++++++|||+|+++++    +++.+++||+|+||
T Consensus        80 ~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvtNPvd~~t~~----~~~~s~~~~~kviG  141 (141)
T PF00056_consen   80 PRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVTNPVDVMTYV----AQKYSGFPPNKVIG  141 (141)
T ss_dssp             SSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-SSSHHHHHHH----HHHHHTSSGGGEEE
T ss_pred             cccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeCCcHHHHHHH----HHHhhCcCcccCcC
Confidence            999999999999999999999999999999999999999999988765    48899999999998

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>cd05296 GH4_P_beta_glucosidase Glycoside Hydrolases Family 4; Phospho-beta-glucosidase

Probab=100.00  E-value=2.5e-31  Score=266.96  Aligned_cols=279  Identities=20%  Similarity=0.255  Sum_probs=191.8

Q ss_pred             CEEEEEcCCCccHHH-HHHHHHhC-C--CCcEEEEEeCC-C-chhHHH----HhhcccCCCeEEEEeCCCChhhhcCCCc
Q 017551           21 FKVAILGAAGGIGQP-LAMLMKIN-P--LVSVLHLYDVV-N-TPGVTA----DISHMDTGAVVRGFLGQPQLENALTGMD   90 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~-la~~l~~~-~--~~~el~L~D~~-~-~~g~~~----dL~~~~~~~~v~~~~~t~dl~~al~~AD   90 (369)
                      +||+|||| |+.-.. +...|++. +  ..+||+|+|++ + ....+.    .+.... ...+++.. |+|+++|++|||
T Consensus         1 ~KI~iIGa-GS~~tp~li~~l~~~~~~l~~~ei~L~Did~~~rl~~v~~~~~~~~~~~-~~~~~v~~-t~d~~~al~gad   77 (419)
T cd05296           1 MKLTIIGG-GSSYTPELIEGLIRRYEELPVTELVLVDIDEEEKLEIVGALAKRMVKKA-GLPIKVHL-TTDRREALEGAD   77 (419)
T ss_pred             CEEEEECC-chHhHHHHHHHHHhccccCCCCEEEEecCChHHHHHHHHHHHHHHHHhh-CCCeEEEE-eCCHHHHhCCCC
Confidence            69999999 754221 22234442 3  36899999999 5 222222    222222 34555543 789999999999


Q ss_pred             EEEEcCCCCCCCCCCHH--------------------HHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHH
Q 017551           91 LVIIPAGVPRKPGMTRD--------------------DLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEV  150 (369)
Q Consensus        91 iVii~ag~p~k~g~~r~--------------------~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~  150 (369)
                      |||+++++++.++++++                    ..+.+|++++++++++|+++||+||+|++|||++++|++    
T Consensus        78 fVi~~~~vg~~~~r~~de~i~~~~Gi~gqET~G~GG~~~a~rni~ii~~i~~~i~~~~Pda~lin~TNP~~ivt~a----  153 (419)
T cd05296          78 FVFTQIRVGGLEARALDERIPLKHGVIGQETTGAGGFAKALRTIPVILDIAEDVEELAPDAWLINFTNPAGIVTEA----  153 (419)
T ss_pred             EEEEEEeeCCcchhhhhhhhHHHcCCccccCCCcchHHHhhhhHHHHHHHHHHHHHHCCCeEEEEecCHHHHHHHH----
Confidence            99999877665555443                    347899999999999999999999999999999998854    


Q ss_pred             HHHhCCCCCCcEEEechhcHHHHHHHHHHHhCCCCCCCceeEEe-ecCC---------Cccccccc--------------
Q 017551          151 FKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG-GHAG---------VTILPLLS--------------  206 (369)
Q Consensus       151 ~~~~~~~~~~kviG~t~Ld~~R~~~~la~~lgv~~~~V~~~viG-~hg~---------~~~vp~~S--------------  206 (369)
                      +++.+   +.|+||+|+.+ .|+++++|+.+|+++++|+++++| ||..         ++.+|.+-              
T Consensus       154 ~~k~~---~~rviGlc~~~-~r~~~~ia~~lg~~~~~v~~~v~GlNH~~w~~~~~~~G~D~~p~l~~~~~~~~~~~~~~~  229 (419)
T cd05296         154 VLRHT---GDRVIGLCNVP-IGLQRRIAELLGVDPEDVFIDYAGLNHLGWLRRVLLDGEDVLPELLEDLAALLSFEEGLL  229 (419)
T ss_pred             HHHhc---cCCEEeeCCcH-HHHHHHHHHHhCCCHHHceEEEEecccceeeeeeeECCcccHHHHHHHhhhccccccccc
Confidence            46664   68999999885 899999999999999999999999 8876         24455211              


Q ss_pred             --cC------CCCCC------CCHHHHH--------------HHHhhh----ccchh-hhhhhhccCCchhhHHHHHHHH
Q 017551          207 --QV------KPPCS------FTQEETE--------------YLTNRI----QNGGT-EVVEAKAGAGSATLSMAYAAVK  253 (369)
Q Consensus       207 --~~------~~~~~------~~~~~~~--------------~l~~~v----~~~~~-ev~~~k~g~g~~~~s~A~a~~~  253 (369)
                        ..      ..|+.      +.++.++              ++.+++    .+... +.-+....++.+.|+  ..+++
T Consensus       230 ~~~~~~~~~g~~p~~Yl~yy~~~~~~~~~~~~~~~~r~e~~~~~~~~l~~~~~~~~~~~~~~~~~~r~g~~y~--e~a~~  307 (419)
T cd05296         230 FGPELLRALGALPNEYLRYYYQTDEALEEILEAAGTRGEVVKEVEKELFELYKDPNLDEKPKELEKRGGAGYS--EAALA  307 (419)
T ss_pred             hHHHHHHhcCCcccchHHHHCCcHHHHHHhhhhccchHHHHHHHHHHHHHHHhccccccChHhhHhhcCcchH--HHHHH
Confidence              00      00111      1121111              111111    11100 000000012334444  78899


Q ss_pred             HHHHHHhccCCCCceeEE-EeecCCC---CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHH
Q 017551          254 FADACLRGLRGDAGVVEC-AFVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLH  316 (369)
Q Consensus       254 li~ai~~~~~~~~~v~~~-~~~~g~~---~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~  316 (369)
                      +++||++|.+.   .+.+ +.++|.+   |+|.++++||+++++|+.++.. ++|++...++++...
T Consensus       308 ii~ai~~~~~~---~~~vNv~N~G~I~~Lp~d~vVEvp~~v~~~G~~P~~v-g~lP~~~~~l~~~~~  370 (419)
T cd05296         308 LISAIYNDKGD---IHVVNVRNNGAIPGLPDDAVVEVPCVVDADGAHPLPV-GPLPPAILGLIQQVK  370 (419)
T ss_pred             HHHHHhcCCCc---EEEEECCCCCCCCCCCCCCEEEEeEEEcCCCceeccC-CCCCHHHHHHHHHHH
Confidence            99999988763   3434 4688887   8999999999999999999765 699999998877554

Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases such as the phospho-beta-glucosidases. Other organisms (such as archaea and Thermotoga maritima ) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. The 6-phospho-beta-glucosidase from Thermotoga maritima hydrolylzes cellobiose 6-phosphate (6P) into glucose-6P and glucose, in an NAD+ and Mn2+ dependent fashion. The Escherichia coli 6-phospho-beta-glucosidase (also called celF) hydrolyzes a variety of phospho-beta-glucosides including cellobiose-6P, salicin-6P, arbutin-6P, and gentobiose-6P. Phospho-beta-glucosidases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein

>PRK15076 alpha-galactosidase; Provisional

Probab=100.00  E-value=1.8e-31  Score=269.22  Aligned_cols=278  Identities=18%  Similarity=0.158  Sum_probs=194.0

Q ss_pred             CEEEEEcCCCccHHHHHH--HHH-hCCCC-cEEEEEeCCC--ch-hHHHHhhccc--CCCeEEEEeCCCChhhhcCCCcE
Q 017551           21 FKVAILGAAGGIGQPLAM--LMK-INPLV-SVLHLYDVVN--TP-GVTADISHMD--TGAVVRGFLGQPQLENALTGMDL   91 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~--~l~-~~~~~-~el~L~D~~~--~~-g~~~dL~~~~--~~~~v~~~~~t~dl~~al~~ADi   91 (369)
                      +||+|||| |++|.+.++  .++ ...+. .||+|+|+++  +. +... +.+..  .....++. .++|+++|++||||
T Consensus         2 ~KIaIIGa-Gsvg~~~~~~~~i~~~~~l~~~evvLvDid~er~~~~~~l-~~~~~~~~~~~~~i~-~ttD~~eal~dADf   78 (431)
T PRK15076          2 PKITFIGA-GSTVFTKNLLGDILSVPALRDAEIALMDIDPERLEESEIV-ARKLAESLGASAKIT-ATTDRREALQGADY   78 (431)
T ss_pred             cEEEEECC-CHHHhHHHHHHHHhhCccCCCCEEEEECCCHHHHHHHHHH-HHHHHHhcCCCeEEE-EECCHHHHhCCCCE
Confidence            69999999 999998887  555 34443 4999999998  22 3333 33332  12334443 26788899999999


Q ss_pred             EEEcCCCC-CCCC--------------CCHHHH--------HHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHH
Q 017551           92 VIIPAGVP-RKPG--------------MTRDDL--------FNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAA  148 (369)
Q Consensus        92 Vii~ag~p-~k~g--------------~~r~~~--------~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~a  148 (369)
                      ||++++++ ++++              ++|.+.        +.+|++++++++++|+++||+||+|++|||+|++|+.+ 
T Consensus        79 Vv~ti~vg~~~~~~~~De~Iplk~G~~~~r~et~G~GG~~~~~r~i~~i~~i~~~i~~~~p~a~iin~tNP~divt~~~-  157 (431)
T PRK15076         79 VINAIQVGGYEPCTVTDFEIPKKYGLRQTIGDTLGIGGIMRALRTIPVLLDICEDMEEVCPDALLLNYVNPMAMNTWAM-  157 (431)
T ss_pred             EeEeeeeCCcchhhhhhhhhHHHcCCeeecccCcCccchhhhhhhHHHHHHHHHHHHHHCCCeEEEEcCChHHHHHHHH-
Confidence            99998876 4444              556666        89999999999999999999999999999999998644 


Q ss_pred             HHHHHhCCCCCCcEEEech--hcHHHHHHHHHHHhCCCCCCCceeEEe-ecCC---------Ccccccccc---C-----
Q 017551          149 EVFKKAGTYDPKKLLGVTM--LDVVRANTFVAEVLGLDPRDVDVPVVG-GHAG---------VTILPLLSQ---V-----  208 (369)
Q Consensus       149 e~~~~~~~~~~~kviG~t~--Ld~~R~~~~la~~lgv~~~~V~~~viG-~hg~---------~~~vp~~S~---~-----  208 (369)
                         +   ++|+.||||+|+  +|+.   +.+|+.+|+++++|++++.| ||..         ++.+|.+..   .     
T Consensus       158 ---~---~~~~~rviG~c~~~~~~~---~~ia~~l~v~~~~v~~~~~GlNH~~W~~~~~~~G~D~~p~l~~~~~~~~~~~  228 (431)
T PRK15076        158 ---N---RYPGIKTVGLCHSVQGTA---EQLARDLGVPPEELRYRCAGINHMAWYLELERKGEDLYPELRAAAAEGQTRC  228 (431)
T ss_pred             ---h---cCCCCCEEEECCCHHHHH---HHHHHHhCCCHHHeEEEEEeecchhhheeeeECCcchHHHHHHHHhccCchh
Confidence               4   578899999983  7764   88999999999999999999 5544         233432111   0     


Q ss_pred             --CC-----------CC------------C-C--CHHHHHHHHhhh---ccchhh-------hh-hhhccCCchh--hHH
Q 017551          209 --KP-----------PC------------S-F--TQEETEYLTNRI---QNGGTE-------VV-EAKAGAGSAT--LSM  247 (369)
Q Consensus       209 --~~-----------~~------------~-~--~~~~~~~l~~~v---~~~~~e-------v~-~~k~g~g~~~--~s~  247 (369)
                        .+           +.            . .  .++.++++..++   .++..+       .. +...  |...  -..
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~y~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  306 (431)
T PRK15076        229 QDKVRYEMLKRFGYFVTESSEHFAEYVPWFIKPGRPDLIERFNIPLDEYPRRCEEQIANWEKEREELAN--AERIEIKRS  306 (431)
T ss_pred             cccccHHHHHHhCCCcccchhhhhhhhcccCcCCCHHHHHHhhcccchhhhhHHHHhhhHHHHHHHhhC--CCccccccc
Confidence              00           00            0 1  233333222110   111111       11 1111  2111  114


Q ss_pred             HHHHHHHHHHHHhccCCCCceeEE-EeecCCC---CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHH
Q 017551          248 AYAAVKFADACLRGLRGDAGVVEC-AFVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHL  317 (369)
Q Consensus       248 A~a~~~li~ai~~~~~~~~~v~~~-~~~~g~~---~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~  317 (369)
                      +..++++++||.+|.+.   ++.+ +.++|.+   |+|.++++||+++++|+.++.. ++|++..+++++.-..
T Consensus       307 ~e~a~~ii~ai~~~~~~---~~~vnv~N~G~I~~Lp~d~vVEvp~~v~~~G~~P~~~-g~lP~~~~~l~~~~~~  376 (431)
T PRK15076        307 REYASTIIEAIETGEPS---VIYGNVRNNGLIDNLPQGCCVEVPCLVDRNGIQPTKV-GDLPPQLAALNRTNIN  376 (431)
T ss_pred             hHHHHHHHHHHhcCCce---EEEEECCCCCcCCCCCCCCEEEEeEEEcCCcceeeec-CCCCHHHHHHHHHHHH
Confidence            57899999999988763   4444 4688876   8999999999999999999876 6999999999885554

>PF02866 Ldh_1_C: lactate/malate dehydrogenase, alpha/beta C-terminal domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR022383 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=99.98  E-value=4.6e-32  Score=242.33  Aligned_cols=153  Identities=31%  Similarity=0.469  Sum_probs=135.3

Q ss_pred             chhcHHHHHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCC-----------CCCCHHHHHHHHhhhccchhhhh
Q 017551          166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPP-----------CSFTQEETEYLTNRIQNGGTEVV  234 (369)
Q Consensus       166 t~Ld~~R~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~-----------~~~~~~~~~~l~~~v~~~~~ev~  234 (369)
                      |.||++||+++||+++|++|++++++||||||+ +++|+||++++.           ..+++++++++.+++++++++|+
T Consensus         1 T~LDs~R~~~~la~~l~v~~~~v~~~ViGeHg~-s~~~~~S~~~v~g~pl~~~~~~~~~~~~~~~~~l~~~v~~~g~~ii   79 (174)
T PF02866_consen    1 TMLDSARFRYFLAEKLGVNPSSVNAYVIGEHGD-SQVPDWSHAKVGGVPLLSYAKPSGKLSEEELEELTERVRKAGYEII   79 (174)
T ss_dssp             THHHHHHHHHHHHHHHTSGGGGEEEEEEBSSST-TEEEEGGGEEETTEEHHHHHHTTTSSSHHHHHHHHHHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHHCcCccceEEEEEecCCc-ceeeeeecccccccccccccccccchhHHhhhccccccEeccceee
Confidence            689999999999999999999999999999999 999999999874           23667788999999999999999


Q ss_pred             hhhccCCchhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC--CCc-cEEEEEEEEcCCCeEEEccCCCCCHHHHH
Q 017551          235 EAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TEL-PFFASKVRLGRQGAEEIFQLGPLNEYESG  310 (369)
Q Consensus       235 ~~k~g~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~-~~~svPv~lg~~Gv~~~~~~~~L~~~E~~  310 (369)
                      +.|.  |+++||+|+|+++++++|++|.+   .+++++ +.+|+|  +++ +|||+||++|++|+++++++++|+++|++
T Consensus        80 ~~k~--g~t~~s~A~a~~~~v~ail~~~~---~i~~~sv~~~g~yg~~~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~~  154 (174)
T PF02866_consen   80 KAKG--GSTSYSIAAAAARIVEAILKDER---RILPVSVYLDGEYGIPDGCVYFSVPVVIGKNGVEKIVEDLPLSEEEQE  154 (174)
T ss_dssp             HHHS--SSCHHHHHHHHHHHHHHHHTTHT---EEEEEEEEEESGGGEESSSEEEEEEEEEETTEEEEEECSBSSTHHHHH
T ss_pred             eecc--ccCcCCHHHHHHHHHHHHhhccc---ccccceeccccccCcccccceecceEEEcCCeeEEEeCCCCCCHHHHH
Confidence            9763  89999999999999999999985   477775 789999  344 99999999999999999984499999999


Q ss_pred             HHHHHHHHHHHHHH
Q 017551          311 LFCLLHLCFQDWLG  324 (369)
Q Consensus       311 ~L~~~~~~i~~~l~  324 (369)
                      +|++++..|++.++
T Consensus       155 ~l~~sa~~l~~~i~  168 (174)
T PF02866_consen  155 KLKESAKELKKEIE  168 (174)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999954444443

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the C-terminal, and is thought to be an is an unusual alpha+beta fold.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process; PDB: 4MDH_B 5MDH_A 1GV0_A 1GUZ_D 2EWD_B 2FRM_D 2FNZ_B 2FN7_B 2FM3_A 1LTH_T ....

>cd05298 GH4_GlvA_pagL_like Glycoside Hydrolases Family 4; GlvA- and pagL-like glycosidases

Probab=99.97  E-value=2.2e-29  Score=253.82  Aligned_cols=281  Identities=19%  Similarity=0.256  Sum_probs=190.1

Q ss_pred             CEEEEEcCCCccHHHHHH----HHHhC-C--CCcEEEEEeCCC-chhHHHHhhccc---CCCeEEEEeCCCChhhhcCCC
Q 017551           21 FKVAILGAAGGIGQPLAM----LMKIN-P--LVSVLHLYDVVN-TPGVTADISHMD---TGAVVRGFLGQPQLENALTGM   89 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~----~l~~~-~--~~~el~L~D~~~-~~g~~~dL~~~~---~~~~v~~~~~t~dl~~al~~A   89 (369)
                      |||+|||| |+   ++++    .|.+. +  ..+||+|+|+++ ....+..+.+..   ....+++.. |+|+++|++||
T Consensus         1 ~KI~iIGa-GS---~~tp~li~~l~~~~~~l~~~ei~L~DId~~rl~~v~~l~~~~~~~~g~~~~v~~-Ttdr~eAl~gA   75 (437)
T cd05298           1 FKIVIAGG-GS---TYTPGIVKSLLDRKEDFPLRELVLYDIDAERQEKVAEAVKILFKENYPEIKFVY-TTDPEEAFTDA   75 (437)
T ss_pred             CeEEEECC-cH---HHHHHHHHHHHhCcccCCCCEEEEECCCHHHHHHHHHHHHHHHHhhCCCeEEEE-ECCHHHHhCCC
Confidence            79999999 74   3444    33444 2  358999999998 222333333221   234566554 78999999999


Q ss_pred             cEEEEcC---C---------CCCCCCC---C-----HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHH
Q 017551           90 DLVIIPA---G---------VPRKPGM---T-----RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE  149 (369)
Q Consensus        90 DiVii~a---g---------~p~k~g~---~-----r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae  149 (369)
                      ||||.+.   |         +|.|+|.   +     ....+.||++++.++++.|+++||+||+|++|||++++|..+  
T Consensus        76 DfVi~~irvGg~~~r~~De~Ip~kyGi~gqET~G~GG~~~alRtip~~~~i~~~i~~~~pda~lin~tNP~~~vt~~~--  153 (437)
T cd05298          76 DFVFAQIRVGGYAMREQDEKIPLKHGVVGQETCGPGGFAYGLRSIGPMIELIDDIEKYSPDAWILNYSNPAAIVAEAL--  153 (437)
T ss_pred             CEEEEEeeeCCchHHHHHHhHHHHcCcceecCccHHHHHHHHhhHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH--
Confidence            9999973   3         2556653   2     466789999999999999999999999999999999998654  


Q ss_pred             HHHHhCCCCCCcEEEechhcHHHHHHHHHHHhCCCCCCCceeEEe-ecCC----------Ccccccccc-----------
Q 017551          150 VFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG-GHAG----------VTILPLLSQ-----------  207 (369)
Q Consensus       150 ~~~~~~~~~~~kviG~t~Ld~~R~~~~la~~lgv~~~~V~~~viG-~hg~----------~~~vp~~S~-----------  207 (369)
                        ++.  +|..|+||+|+.... ++..+|+.+|+++++++..+.| ||..          ++.+|.+..           
T Consensus       154 --~~~--~~~~kviGlC~~~~~-~~~~la~~lg~~~~~v~~~~~GlNH~~w~~~~~~~~G~D~~p~l~e~~~~~~~~~~~  228 (437)
T cd05298         154 --RRL--FPNARILNICDMPIA-IMDSMAAILGLDRKDLEPDYFGLNHFGWFTKIYDKQGEDLLPKLREHVKENGYLPPD  228 (437)
T ss_pred             --HHH--CCCCCEEEECCcHHH-HHHHHHHHhCCCHHHceEEEEeecchhhhhheEECCCCchHHHHHHHHhccCCCccc
Confidence              555  788999999987654 7888999999999999999888 3332          234443210           


Q ss_pred             ---C---C-------------------CCCC-----C-CHH--------------HHHHHHhhhccchhhhhhhhccCCc
Q 017551          208 ---V---K-------------------PPCS-----F-TQE--------------ETEYLTNRIQNGGTEVVEAKAGAGS  242 (369)
Q Consensus       208 ---~---~-------------------~~~~-----~-~~~--------------~~~~l~~~v~~~~~ev~~~k~g~g~  242 (369)
                         .   .                   +++.     + .++              .+++..+++.+...++.....-+..
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~p~~y~~yy~~~~~~~~~~~~~~~~~~e~~~~~~~~l~~~~~~~~~~~~~~~~  308 (437)
T cd05298         229 SDEEHRDPSWNDTFANAKDMMADFPDYLPNTYLQYYLYPDYMVEHSNPNYTRANEVMDGREKRVFEECRKIIETGTAEGS  308 (437)
T ss_pred             ccccccccCchHHHHHHhhHHHhCCCcCCCchhhHhCChHHHHHHhccccccHHHHHHHHHHHHHHHHhhhhhcCChhhh
Confidence               0   0                   1111     0 111              1111111111111100000000000


Q ss_pred             hhh--HHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC---CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHH
Q 017551          243 ATL--SMAYAAVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLH  316 (369)
Q Consensus       243 ~~~--s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~  316 (369)
                      ...  ..|.+++++++||++|.+   .+++++ +++|.|   ++|+++|+||+||++|+.++.- ++|++...++++.-.
T Consensus       309 ~~~~~~ya~~a~~ii~aI~~d~~---~~~~vnv~n~G~i~nL~~d~~vevP~~v~~~Gi~pi~v-g~lP~~~~~l~~~~~  384 (437)
T cd05298         309 TFHVDVHGEYIVDLAASIAYNTK---ERFLVIVENNGAIPNLPDDAMVEVPAYIGSNGPEPLVV-GKIPTFYKGLMEQQV  384 (437)
T ss_pred             hhhccchHHHHHHHHHHHHcCCC---eEEEEEeecCCccCCCCCCcEEEEEEEEeCCCceeccc-CCCCHHHHHHHHHHH
Confidence            110  146889999999999876   367775 788887   7899999999999999999875 799999999877544


Q ss_pred             H
Q 017551          317 L  317 (369)
Q Consensus       317 ~  317 (369)
                      .
T Consensus       385 ~  385 (437)
T cd05298         385 A  385 (437)
T ss_pred             H
Confidence            3

Bacillus subtilis GlvA and Clostridium acetobutylicum pagL are 6-phospho-alpha-glucosidase, catalyzing the hydrolysis of alpha-glucopyranoside bonds to release glucose from oligosaccharides. The substrate specificities of other members of this subgroup are unknown. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP_PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases, which include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. Members of this subfamily are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductas

>COG1486 CelF Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases [Carbohydrate transport and metabolism]

Probab=99.96  E-value=1.6e-28  Score=243.32  Aligned_cols=284  Identities=22%  Similarity=0.245  Sum_probs=192.0

Q ss_pred             CCCEEEEEcCCCccHHHHHH--HHHhCC--CCcEEEEEeCCC-chhHHHHhhccc---CCCeEEEEeCCCChhhhcCCCc
Q 017551           19 AGFKVAILGAAGGIGQPLAM--LMKINP--LVSVLHLYDVVN-TPGVTADISHMD---TGAVVRGFLGQPQLENALTGMD   90 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~--~l~~~~--~~~el~L~D~~~-~~g~~~dL~~~~---~~~~v~~~~~t~dl~~al~~AD   90 (369)
                      +..||+|||| |+.+.+...  .|.+.+  .+.||+|||+++ ......++.+..   ....+++.. |+|+++||+|||
T Consensus         2 ~~~KI~iIGg-GSt~tp~~v~g~l~~~e~l~~~el~L~Did~~r~~~i~~~~~~~v~~~g~~~kv~~-ttd~~eAl~gAd   79 (442)
T COG1486           2 KKFKIVIIGG-GSTYTPKLLLGDLARTEELPVRELALYDIDEERLKIIAILAKKLVEEAGAPVKVEA-TTDRREALEGAD   79 (442)
T ss_pred             CcceEEEECC-CccccHHHHHHHHhcCccCCcceEEEEeCCHHHHHHHHHHHHHHHHhhCCCeEEEE-ecCHHHHhcCCC
Confidence            4579999999 866555432  334444  468999999998 333333333322   234466654 789999999999


Q ss_pred             EEEEcC---C---------CCCCCCC---C-----HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHH
Q 017551           91 LVIIPA---G---------VPRKPGM---T-----RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEV  150 (369)
Q Consensus        91 iVii~a---g---------~p~k~g~---~-----r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~  150 (369)
                      ||+.+.   |         +|.|+|.   +     ......|+++++.+|+++|+++||+||++++|||+.++|.    +
T Consensus        80 fVi~~~rvG~l~~r~~De~IplkyG~~gqET~G~GGi~~glRtIpvildi~~~m~~~~P~Aw~lNytNP~~~vTe----A  155 (442)
T COG1486          80 FVITQIRVGGLEAREKDERIPLKHGLYGQETNGPGGIFYGLRTIPVILDIAKDMEKVCPNAWMLNYTNPAAIVTE----A  155 (442)
T ss_pred             EEEEEEeeCCcccchhhhccchhhCccccccccccHHHhhcccchHHHHHHHHHHHhCCCceEEeccChHHHHHH----H
Confidence            999973   2         3777762   2     4566789999999999999999999999999999999985    4


Q ss_pred             HHHhCCCCCCcEEEechhcHHHHHHHHHHHhCCCC-CCCceeEEe-ecCC---------Ccccccccc------------
Q 017551          151 FKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDP-RDVDVPVVG-GHAG---------VTILPLLSQ------------  207 (369)
Q Consensus       151 ~~~~~~~~~~kviG~t~Ld~~R~~~~la~~lgv~~-~~V~~~viG-~hg~---------~~~vp~~S~------------  207 (369)
                      +++.  +|.-|++|+|+.... ....||+.||+++ ++++.-+.| ||..         .+.+|.+..            
T Consensus       156 v~r~--~~~~K~VGlCh~~~g-~~~~lAe~L~~~~~~~l~~~~aGlNH~~w~~~~~~~G~d~~p~l~~~~~~~~~~~~~~  232 (442)
T COG1486         156 VRRL--YPKIKIVGLCHGPIG-IAMELAEVLGLEPREDLRYRVAGLNHMVWILRVRDDGEDLYPELLEALEEGGSPSEPE  232 (442)
T ss_pred             HHHh--CCCCcEEeeCCchHH-HHHHHHHHhCCCchhceeEEEeechhhhhhhHhhhcCccchHHHHHHHhccccCCccc
Confidence            4664  553499999997643 6899999999975 999999888 4443         122222111            


Q ss_pred             -----------CC----C---CCC-----------------------CCHHHHHHHHhhhccchhh--hhhh---hccCC
Q 017551          208 -----------VK----P---PCS-----------------------FTQEETEYLTNRIQNGGTE--VVEA---KAGAG  241 (369)
Q Consensus       208 -----------~~----~---~~~-----------------------~~~~~~~~l~~~v~~~~~e--v~~~---k~g~g  241 (369)
                                 ..    +   ++.                       ...+++.+..++..+.-.+  +...   ...++
T Consensus       233 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ra~ev~~re~~~~~~~~~~~~~~~p~~~~~~~  312 (442)
T COG1486         233 NKNIQSPVWIDMFLKYGYPVLPSSYHRYYYYPYDMKEKKPDEIEKFGTRANEVMKREKELFELYKKPELKEKPEELEKRI  312 (442)
T ss_pred             cccccCcchHHHHHHhCcCcccCcchhhheehHhhhhccchhhhhcCCCHHHHHHHHHHHHHHHhhhhhhcCchhhhhcC
Confidence                       00    0   000                       0111221111111110000  0000   01122


Q ss_pred             ch--hhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC---CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHH
Q 017551          242 SA--TLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLL  315 (369)
Q Consensus       242 ~~--~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~  315 (369)
                      .+  .++  .+++++++||++|.+.   ++.++ .++|.+   |+|.++++||+||++|+.++.. |+|+++.++++++.
T Consensus       313 ~~~~~~~--e~a~~ii~Ai~~~~~~---~~~vNv~N~G~I~nlp~D~vVEvpc~Vd~~Gi~P~~~-g~lP~~~~~l~~~~  386 (442)
T COG1486         313 GAGKYSS--EYASNIINAIENNKPS---RIYVNVRNNGAITNLPDDAVVEVPCLVDRNGIHPLAV-GDLPEFVKGLMHTN  386 (442)
T ss_pred             CcccccH--HHHHHHHHHHhcCCce---EEEEEcCCCccccCCCCCeEEEeeEEecCCCCccccc-CCCCHHHHHHHHHH
Confidence            32  333  7889999999999774   44454 689987   8999999999999999999776 79999999988866


Q ss_pred             HH
Q 017551          316 HL  317 (369)
Q Consensus       316 ~~  317 (369)
                      ..
T Consensus       387 i~  388 (442)
T COG1486         387 IN  388 (442)
T ss_pred             HH
Confidence            54

>cd05297 GH4_alpha_glucosidase_galactosidase Glycoside Hydrolases Family 4; Alpha-glucosidases and alpha-galactosidases

Probab=99.96  E-value=1.8e-27  Score=240.02  Aligned_cols=281  Identities=18%  Similarity=0.150  Sum_probs=193.3

Q ss_pred             CEEEEEcCCCccHHHHHH--HHHhC-CC-CcEEEEEeCCC--chhHHHHhhccc--CCCeEEEEeCCCChhhhcCCCcEE
Q 017551           21 FKVAILGAAGGIGQPLAM--LMKIN-PL-VSVLHLYDVVN--TPGVTADISHMD--TGAVVRGFLGQPQLENALTGMDLV   92 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~--~l~~~-~~-~~el~L~D~~~--~~g~~~dL~~~~--~~~~v~~~~~t~dl~~al~~ADiV   92 (369)
                      +||+|||| |++|++++.  .+++. .. ..+|+|||+++  +.....++.+..  .....++. .++|+++|++|||+|
T Consensus         1 ~KIaIIGa-Gs~G~a~a~~~~i~~~~~~~g~eV~L~Did~e~l~~~~~~~~~~~~~~~~~~~I~-~ttD~~eal~~AD~V   78 (423)
T cd05297           1 IKIAFIGA-GSVVFTKNLVGDLLKTPELSGSTIALMDIDEERLETVEILAKKIVEELGAPLKIE-ATTDRREALDGADFV   78 (423)
T ss_pred             CeEEEECC-ChHHhHHHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHhcCCCeEEE-EeCCHHHHhcCCCEE
Confidence            59999999 999999877  45433 33 34999999998  444444444332  12223332 267899999999999


Q ss_pred             EEcCCCCCCCCCCH----------------------HHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHH
Q 017551           93 IIPAGVPRKPGMTR----------------------DDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEV  150 (369)
Q Consensus        93 ii~ag~p~k~g~~r----------------------~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~  150 (369)
                      |++++.+..+++++                      .....+|++++.++++.+.++||++|++++|||++++|+++   
T Consensus        79 i~ai~~~~~~~~~~de~i~~K~g~~~~~~~t~g~ggi~~~~~s~~~i~~ia~~i~~~~p~a~~i~~tNPv~i~t~~~---  155 (423)
T cd05297          79 INTIQVGGHEYTETDFEIPEKYGYYQTVGDTSGPGGIFRALRTIPVLLDIARDIEELCPDAWLLNYANPMAELTWAL---  155 (423)
T ss_pred             EEeeEecCccchhhhhhhHHHcCeeeeccCCCcHHHHHHHHhhHHHHHHHHHHHHHHCCCCEEEEcCChHHHHHHHH---
Confidence            99987655444433                      56778999999999999999999999999999999998654   


Q ss_pred             HHHhCCCCCCcEEEechhcHHHHHHHHHHHhCCCCCCCceeEEe-ecCC---------Ccccccccc-----------CC
Q 017551          151 FKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG-GHAG---------VTILPLLSQ-----------VK  209 (369)
Q Consensus       151 ~~~~~~~~~~kviG~t~Ld~~R~~~~la~~lgv~~~~V~~~viG-~hg~---------~~~vp~~S~-----------~~  209 (369)
                       ++.++   .|+||+|+. +.|++..+|+.+|+++++|+++++| ||..         ++.+|.+-.           ..
T Consensus       156 -~k~~~---~rviG~c~~-~~~~~~~~a~~l~~~~~~v~~~~~GlNH~~w~~~~~~~G~d~~p~l~~~~~~~~~~~~~~~  230 (423)
T cd05297         156 -NRYTP---IKTVGLCHG-VQGTAEQLAKLLGEPPEEVDYQVAGINHMAWLLKFEYNGEDLYPLLDEWIEEGSEEWDQLS  230 (423)
T ss_pred             -HHhCC---CCEEEECCc-HHHHHHHHHHHhCCCHHHeEEEEEeeccHhhhhhheECCcchHHHHHHHHhccCccchhcc
Confidence             67654   799999875 6789999999999999999999999 5543         234442111           11


Q ss_pred             -CC-----------C-------C------CCHHHHHHHHhhhcc--------------chhhhhhhh----ccCCchhhH
Q 017551          210 -PP-----------C-------S------FTQEETEYLTNRIQN--------------GGTEVVEAK----AGAGSATLS  246 (369)
Q Consensus       210 -~~-----------~-------~------~~~~~~~~l~~~v~~--------------~~~ev~~~k----~g~g~~~~s  246 (369)
                       ++           .       .      ..++..........+              ...+-.+.+    ...+...  
T Consensus       231 ~~~~~~~~~~g~~p~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  308 (423)
T cd05297         231 PVRFDMYRRYGLFPTESSEHLSEYVPHYRKETKKIWYGEFNEDEYGGRDEEQGWEWYEERLKLILAEIDKEELDPVKR--  308 (423)
T ss_pred             cchHHHHHHcCCcccCcchhhhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHhhhhhccchhcchhcccccc--
Confidence             10           0       0      111111111000000              000000000    0011122  


Q ss_pred             HHHHHHHHHHHHHhccCCCCceeEEE-eecCCC---CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHH
Q 017551          247 MAYAAVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHL  317 (369)
Q Consensus       247 ~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~  317 (369)
                      .+..++++++||++|.+.   ++.++ .++|.+   |+|.++++||+|+++|+.++.. ++|++...++++.-..
T Consensus       309 ~~e~a~~ii~ai~~~~~~---~~~vnv~N~G~I~~Lp~d~vVEvp~~v~~~G~~p~~~-g~lp~~~~~l~~~~~~  379 (423)
T cd05297         309 SGEYASPIIEALVTGKPR---RINGNVPNNGLIPNLPDDVVVEVPALVDRNGIHPEKI-GPLPPQLAALIRPRIN  379 (423)
T ss_pred             chHHHHHHHHHHhcCCce---EEEEECCCCCCCCCCCCCcEEEEeeEEcCCCceeccc-CCCCHHHHHHHHHHHH
Confidence            346789999999987663   44444 688886   8999999999999999999876 7999999998885554

linked to 3D####ucture

>PF02056 Glyco_hydro_4: Family 4 glycosyl hydrolase; InterPro: IPR001088 O-Glycosyl hydrolases 3

Probab=99.88  E-value=7.6e-22  Score=176.58  Aligned_cols=152  Identities=21%  Similarity=0.250  Sum_probs=108.4

Q ss_pred             EEEEEcCCCccHHHHHH--HHHhCC--CCcEEEEEeCCC-chhH----HHHhhcccCCCeEEEEeCCCChhhhcCCCcEE
Q 017551           22 KVAILGAAGGIGQPLAM--LMKINP--LVSVLHLYDVVN-TPGV----TADISHMDTGAVVRGFLGQPQLENALTGMDLV   92 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~--~l~~~~--~~~el~L~D~~~-~~g~----~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiV   92 (369)
                      ||+|||| |++-.+...  .+...+  ..+||+|+|+|+ ....    +..+.... ..++++.. |+|+++|++|||||
T Consensus         1 KI~iIGa-GS~~~~~~l~~~l~~~~~l~~~ei~L~Did~~RL~~~~~~~~~~~~~~-~~~~~v~~-ttd~~eAl~gADfV   77 (183)
T PF02056_consen    1 KITIIGA-GSTYFPLLLLGDLLRTEELSGSEIVLMDIDEERLEIVERLARRMVEEA-GADLKVEA-TTDRREALEGADFV   77 (183)
T ss_dssp             EEEEETT-TSCCHHHHHHHHHHCTTTSTEEEEEEE-SCHHHHHHHHHHHHHHHHHC-TTSSEEEE-ESSHHHHHTTESEE
T ss_pred             CEEEECC-chHhhHHHHHHHHhcCccCCCcEEEEEcCCHHHHHHHHHHHHHHHHhc-CCCeEEEE-eCCHHHHhCCCCEE
Confidence            8999999 877666432  344444  356999999998 2222    22232222 34455443 68999999999999


Q ss_pred             EEcCC------------CCCCCCCC----------HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHH
Q 017551           93 IIPAG------------VPRKPGMT----------RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEV  150 (369)
Q Consensus        93 ii~ag------------~p~k~g~~----------r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~  150 (369)
                      |++..            +|+++|..          ......|+++++.+++++|+++||+||++|+|||+.++|..    
T Consensus        78 i~~irvGg~~~r~~De~Ip~k~Gi~~~~~eT~G~GG~~~alRtipv~~~ia~~i~~~~PdAw~iNytNP~~~vt~a----  153 (183)
T PF02056_consen   78 INQIRVGGLEAREIDEEIPLKYGIVGTIQETVGPGGFFRALRTIPVMLDIARDIEELCPDAWLINYTNPMGIVTEA----  153 (183)
T ss_dssp             EE---TTHHHHHHHHHHTGGCCTTT-BTTSSSTHHHHHHHHHHHHHHHHHHHHHHHHTTTSEEEE-SSSHHHHHHH----
T ss_pred             EEEeeecchHHHHHHHHHHHHhCCccccccccCccHHHHHHhhHHHHHHHHHHHHHhCCCcEEEeccChHHHHHHH----
Confidence            99853            47787632          46778999999999999999999999999999999998854    


Q ss_pred             HHHhCCCCCCcEEEechhcHHHHHHHHHHHhCC
Q 017551          151 FKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGL  183 (369)
Q Consensus       151 ~~~~~~~~~~kviG~t~Ld~~R~~~~la~~lgv  183 (369)
                      +.+.  +|..|++|+|+... -....+|+.||+
T Consensus       154 ~~r~--~~~~k~vGlCh~~~-~~~~~la~~L~~  183 (183)
T PF02056_consen  154 LSRY--TPKIKVVGLCHGPQ-GTRRQLAKLLGM  183 (183)
T ss_dssp             HHHH--STTSEEEEE-SHHH-HHHHHHHHHHT-
T ss_pred             HHHh--CCCCCEEEECCCHH-HHHHHHHHHhCc
Confidence            4554  45579999998764 467889998874

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 4 GH4 from CAZY comprises enzymes with several known activities; 6-phospho-beta-glucosidase (3.2.1.86 from EC); 6-phospho-alpha-glucosidase (3.2.1.122 from EC); alpha-galactosidase (3.2.1.22 from EC). 6-phospho-alpha-glucosidase requires both NAD(H) and divalent metal (Mn2+, Fe2+, Co2+, or Ni2+) for activity [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1U8X_X 1S6Y_A 3FEF_B 1VJT_A 1UP4_A 1UP6_C 1UP7_E 1OBB_A.

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=98.89  E-value=7.7e-08  Score=94.89  Aligned_cols=115  Identities=17%  Similarity=0.241  Sum_probs=86.3

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHH-------------HHhh-cccCCCeEEEEeCCCChhhhc
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVT-------------ADIS-HMDTGAVVRGFLGQPQLENAL   86 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~-------------~dL~-~~~~~~~v~~~~~t~dl~~al   86 (369)
                      |||+|+|. |+||...+..|++.|+  +|+++|+++.+-..             .+|. +.....++++   |+|+++|+
T Consensus         1 MkI~viGt-GYVGLv~g~~lA~~GH--eVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~f---Ttd~~~a~   74 (414)
T COG1004           1 MKITVIGT-GYVGLVTGACLAELGH--EVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRF---TTDYEEAV   74 (414)
T ss_pred             CceEEECC-chHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEE---EcCHHHHH
Confidence            79999999 9999999999999998  99999999722111             1122 1122345665   57999999


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe--cCCCCChhHHH
Q 017551           87 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI--SNPVNSTVPIA  147 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~--tNPv~~~t~i~  147 (369)
                      +++|+++|+.|.|.++.-      ..++..+...++.|.++.+...+++.  |-|++....+-
T Consensus        75 ~~adv~fIavgTP~~~dg------~aDl~~V~ava~~i~~~~~~~~vvV~KSTVPvGt~~~v~  131 (414)
T COG1004          75 KDADVVFIAVGTPPDEDG------SADLSYVEAVAKDIGEILDGKAVVVIKSTVPVGTTEEVR  131 (414)
T ss_pred             hcCCEEEEEcCCCCCCCC------CccHHHHHHHHHHHHhhcCCCeEEEEcCCCCCCchHHHH
Confidence            999999999999987631      34567788888888888876444444  78998876554

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=98.85  E-value=9.8e-09  Score=92.32  Aligned_cols=117  Identities=25%  Similarity=0.401  Sum_probs=76.8

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--ch---hHHHH-hhcc----c--------CCCeEEEEeCCCChh
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TP---GVTAD-ISHM----D--------TGAVVRGFLGQPQLE   83 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~---g~~~d-L~~~----~--------~~~~v~~~~~t~dl~   83 (369)
                      ||+|||| |.+|..++..++..|+  +|+|||.+.  ..   ....+ |...    .        ...+++.   ++|++
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~--~V~l~d~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~---~~dl~   74 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGY--EVTLYDRSPEALERARKRIERLLDRLVRKGRLSQEEADAALARISF---TTDLE   74 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTS--EEEEE-SSHHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTEEE---ESSGG
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCC--cEEEEECChHHHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhccc---ccCHH
Confidence            7999999 9999999999999998  999999987  11   11111 1100    0        1235554   46786


Q ss_pred             hhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCChh-HHHHHHHHHhCCCCCCc
Q 017551           84 NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTV-PIAAEVFKKAGTYDPKK  161 (369)
Q Consensus        84 ~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t-~i~ae~~~~~~~~~~~k  161 (369)
                      ++. +||+||.+.              .+++++.+++..+++++| |+++  ++||-..+.. .++    ...  -.|+|
T Consensus        75 ~~~-~adlViEai--------------~E~l~~K~~~~~~l~~~~~~~~i--lasnTSsl~i~~la----~~~--~~p~R  131 (180)
T PF02737_consen   75 EAV-DADLVIEAI--------------PEDLELKQELFAELDEICPPDTI--LASNTSSLSISELA----AAL--SRPER  131 (180)
T ss_dssp             GGC-TESEEEE-S---------------SSHHHHHHHHHHHHCCS-TTSE--EEE--SSS-HHHHH----TTS--STGGG
T ss_pred             HHh-hhheehhhc--------------cccHHHHHHHHHHHHHHhCCCce--EEecCCCCCHHHHH----hcc--CcCce
Confidence            655 999999995              668999999999999999 5664  4888776533 322    122  23677


Q ss_pred             EEEech
Q 017551          162 LLGVTM  167 (369)
Q Consensus       162 viG~t~  167 (369)
                      ++|+..
T Consensus       132 ~ig~Hf  137 (180)
T PF02737_consen  132 FIGMHF  137 (180)
T ss_dssp             EEEEEE
T ss_pred             EEEEec
Confidence            888754

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>COG1250 FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]

Probab=98.82  E-value=1.4e-08  Score=98.08  Aligned_cols=121  Identities=22%  Similarity=0.322  Sum_probs=85.0

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--c-hh--HHHH-hhc---cc------CCCeEEEEeCCCChhh
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--T-PG--VTAD-ISH---MD------TGAVVRGFLGQPQLEN   84 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~-~g--~~~d-L~~---~~------~~~~v~~~~~t~dl~~   84 (369)
                      .+||+|||| |.||+.+|..++..++  +|+|+|+++  + .+  .... |..   ..      ....+...+.++++ .
T Consensus         3 i~kv~ViGa-G~MG~gIA~~~A~~G~--~V~l~D~~~~~~~~~~~~i~~~l~k~~~~g~l~~~~~~~~l~~i~~~~~~-~   78 (307)
T COG1250           3 IKKVAVIGA-GVMGAGIAAVFALAGY--DVVLKDISPEALERALAYIEKNLEKLVEKGKLTEEEADAALARITPTTDL-A   78 (307)
T ss_pred             ccEEEEEcc-cchhHHHHHHHhhcCC--ceEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHhhccccCch-h
Confidence            369999999 9999999999999667  999999996  1 11  1111 111   10      01112222235666 4


Q ss_pred             hcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCC-hhHHHHHHHHHhCCCCCCcE
Q 017551           85 ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNS-TVPIAAEVFKKAGTYDPKKL  162 (369)
Q Consensus        85 al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~-~t~i~ae~~~~~~~~~~~kv  162 (369)
                      ++++||+||.++              .+|.++.+++..++++++ |+++  ++||-..+ ++.++ +.+     ..|+|+
T Consensus        79 ~l~~~DlVIEAv--------------~E~levK~~vf~~l~~~~~~~aI--lASNTSsl~it~ia-~~~-----~rper~  136 (307)
T COG1250          79 ALKDADLVIEAV--------------VEDLELKKQVFAELEALAKPDAI--LASNTSSLSITELA-EAL-----KRPERF  136 (307)
T ss_pred             HhccCCEEEEec--------------cccHHHHHHHHHHHHhhcCCCcE--EeeccCCCCHHHHH-HHh-----CCchhE
Confidence            899999999996              789999999999999999 6774  49999886 44333 222     346788


Q ss_pred             EEec
Q 017551          163 LGVT  166 (369)
Q Consensus       163 iG~t  166 (369)
                      +|+.
T Consensus       137 iG~H  140 (307)
T COG1250         137 IGLH  140 (307)
T ss_pred             EEEe
Confidence            8874

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.74  E-value=6.3e-08  Score=94.65  Aligned_cols=120  Identities=16%  Similarity=0.139  Sum_probs=83.5

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-c-hh----HHHH---hhcc-----cCCCeEEEEeCCCChhhhc
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-T-PG----VTAD---ISHM-----DTGAVVRGFLGQPQLENAL   86 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-~-~g----~~~d---L~~~-----~~~~~v~~~~~t~dl~~al   86 (369)
                      .||+|||+ |.||+.++..++..|+  +|+|||++. . ..    +...   +...     ....+++.   ++++++++
T Consensus         8 ~~VaVIGa-G~MG~giA~~~a~aG~--~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~---~~~l~~av   81 (321)
T PRK07066          8 KTFAAIGS-GVIGSGWVARALAHGL--DVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRF---VATIEACV   81 (321)
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhcee---cCCHHHHh
Confidence            58999999 9999999999999998  999999986 1 11    1111   1111     01123343   45788899


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEec
Q 017551           87 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT  166 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t  166 (369)
                      ++||+|+.++              .+|..+.+++...+.+++|... |+.||-..+...-++   ...  -.|.|++|+.
T Consensus        82 ~~aDlViEav--------------pE~l~vK~~lf~~l~~~~~~~a-IlaSnTS~l~~s~la---~~~--~~p~R~~g~H  141 (321)
T PRK07066         82 ADADFIQESA--------------PEREALKLELHERISRAAKPDA-IIASSTSGLLPTDFY---ARA--THPERCVVGH  141 (321)
T ss_pred             cCCCEEEECC--------------cCCHHHHHHHHHHHHHhCCCCe-EEEECCCccCHHHHH---Hhc--CCcccEEEEe
Confidence            9999999985              6678899999999999996542 668888866432222   121  2356777764

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.70  E-value=1.4e-07  Score=90.99  Aligned_cols=122  Identities=18%  Similarity=0.251  Sum_probs=83.1

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc---hh--HHHH----hhccc---------CCCeEEEEeCCCCh
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PG--VTAD----ISHMD---------TGAVVRGFLGQPQL   82 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~---~g--~~~d----L~~~~---------~~~~v~~~~~t~dl   82 (369)
                      .||+|||+ |.+|..+|..++..|+  +|+|||++..   .+  ...+    +.+..         ...+++.   ++|+
T Consensus         6 ~~V~ViGa-G~mG~~iA~~~a~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~l~~---~~~~   79 (286)
T PRK07819          6 QRVGVVGA-GQMGAGIAEVCARAGV--DVLVFETTEELATAGRNRIEKSLERAVSRGKLTERERDAALARLRF---TTDL   79 (286)
T ss_pred             cEEEEEcc-cHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHhCeEe---eCCH
Confidence            49999999 9999999999999998  9999999871   11  1111    11110         0123443   4677


Q ss_pred             hhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCChhHHHHHHHHHhCCCCCCc
Q 017551           83 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKK  161 (369)
Q Consensus        83 ~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~k  161 (369)
                       +++++||+||.+.              .++.++.+++...++++| +.. .|++||-..+.....+    ... -.+.|
T Consensus        80 -~~~~~~d~ViEav--------------~E~~~~K~~l~~~l~~~~~~~~-~il~snTS~~~~~~la----~~~-~~~~r  138 (286)
T PRK07819         80 -GDFADRQLVIEAV--------------VEDEAVKTEIFAELDKVVTDPD-AVLASNTSSIPIMKLA----AAT-KRPGR  138 (286)
T ss_pred             -HHhCCCCEEEEec--------------ccCHHHHHHHHHHHHHhhCCCC-cEEEECCCCCCHHHHH----hhc-CCCcc
Confidence             6799999999995              678899999999999997 433 2447777765433222    222 23567


Q ss_pred             EEEechhc
Q 017551          162 LLGVTMLD  169 (369)
Q Consensus       162 viG~t~Ld  169 (369)
                      ++|+...+
T Consensus       139 ~~g~hf~~  146 (286)
T PRK07819        139 VLGLHFFN  146 (286)
T ss_pred             EEEEecCC
Confidence            88875433

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=98.65  E-value=6.8e-08  Score=87.26  Aligned_cols=133  Identities=19%  Similarity=0.273  Sum_probs=80.9

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHH-----------HHhhc-ccCCCeEEEEeCCCChhhhc
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVT-----------ADISH-MDTGAVVRGFLGQPQLENAL   86 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~-----------~dL~~-~~~~~~v~~~~~t~dl~~al   86 (369)
                      |||+|||. |++|.++|..|+..|+  +++.+|+++.+  ...           .++.. .....++..   ++|.++++
T Consensus         1 M~I~ViGl-GyvGl~~A~~lA~~G~--~V~g~D~~~~~v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~---t~~~~~ai   74 (185)
T PF03721_consen    1 MKIAVIGL-GYVGLPLAAALAEKGH--QVIGVDIDEEKVEALNNGELPIYEPGLDELLKENVSAGRLRA---TTDIEEAI   74 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTTS--EEEEE-S-HHHHHHHHTTSSSS-CTTHHHHHHHHHHTTSEEE---ESEHHHHH
T ss_pred             CEEEEECC-CcchHHHHHHHHhCCC--EEEEEeCChHHHHHHhhccccccccchhhhhccccccccchh---hhhhhhhh
Confidence            79999999 9999999999999998  99999999721  111           11111 111356665   36788889


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEe-cCCCCChhHHHHHHHHHhCCCCCCcEEE
Q 017551           87 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLI-SNPVNSTVPIAAEVFKKAGTYDPKKLLG  164 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~-tNPv~~~t~i~ae~~~~~~~~~~~kviG  164 (369)
                      ++||++|++.+.|..++.+      -+...+.+.++.|.++. ++.+|++= |-|.+.+-.++..++.+.++..  .=|+
T Consensus        75 ~~adv~~I~VpTP~~~~~~------~Dls~v~~a~~~i~~~l~~~~lvV~~STvppGtt~~~~~~ile~~~~~~--~~f~  146 (185)
T PF03721_consen   75 KDADVVFICVPTPSDEDGS------PDLSYVESAIESIAPVLRPGDLVVIESTVPPGTTEELLKPILEKRSGKK--EDFH  146 (185)
T ss_dssp             HH-SEEEE----EBETTTS------BETHHHHHHHHHHHHHHCSCEEEEESSSSSTTHHHHHHHHHHHHHCCTT--TCEE
T ss_pred             hccceEEEecCCCccccCC------ccHHHHHHHHHHHHHHHhhcceEEEccEEEEeeehHhhhhhhhhhcccc--cCCe
Confidence            9999999999888766421      23344556666666654 44544433 6888888766666677766543  3455


Q ss_pred             ech
Q 017551          165 VTM  167 (369)
Q Consensus       165 ~t~  167 (369)
                      ++.
T Consensus       147 la~  149 (185)
T PF03721_consen  147 LAY  149 (185)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            544

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.56  E-value=6.4e-07  Score=86.16  Aligned_cols=120  Identities=20%  Similarity=0.300  Sum_probs=78.3

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHH----hhc-----ccC---------CCeEEEEeCCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTAD----ISH-----MDT---------GAVVRGFLGQPQ   81 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~d----L~~-----~~~---------~~~v~~~~~t~d   81 (369)
                      +||+|||+ |.+|+.++..++..+.  +|+++|+++. ...+.+    +.+     ...         ..+++.   ++|
T Consensus         4 ~kIaViGa-G~mG~~iA~~la~~G~--~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~d   77 (287)
T PRK08293          4 KNVTVAGA-GVLGSQIAFQTAFHGF--DVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITL---TTD   77 (287)
T ss_pred             cEEEEECC-CHHHHHHHHHHHhcCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEE---eCC
Confidence            59999999 9999999999999887  9999999861 111111    110     000         123443   467


Q ss_pred             hhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCc
Q 017551           82 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKK  161 (369)
Q Consensus        82 l~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~k  161 (369)
                      +++++++||+||++.              ..+.++.+++.+++.+++++.. ++++|.......-+   ... .. .+.|
T Consensus        78 ~~~a~~~aDlVieav--------------pe~~~~k~~~~~~l~~~~~~~~-ii~sntSt~~~~~~---~~~-~~-~~~r  137 (287)
T PRK08293         78 LAEAVKDADLVIEAV--------------PEDPEIKGDFYEELAKVAPEKT-IFATNSSTLLPSQF---AEA-TG-RPEK  137 (287)
T ss_pred             HHHHhcCCCEEEEec--------------cCCHHHHHHHHHHHHhhCCCCC-EEEECcccCCHHHH---Hhh-cC-Cccc
Confidence            888899999999995              3456778888888988886442 33566665432211   122 11 2557


Q ss_pred             EEEec
Q 017551          162 LLGVT  166 (369)
Q Consensus       162 viG~t  166 (369)
                      ++|+.
T Consensus       138 ~vg~H  142 (287)
T PRK08293        138 FLALH  142 (287)
T ss_pred             EEEEc
Confidence            77764

>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed

Probab=98.56  E-value=3.3e-07  Score=98.72  Aligned_cols=118  Identities=17%  Similarity=0.211  Sum_probs=85.2

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-c--hhH--HHH----hhccc---------CCCeEEEEeCCCCh
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-T--PGV--TAD----ISHMD---------TGAVVRGFLGQPQL   82 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-~--~g~--~~d----L~~~~---------~~~~v~~~~~t~dl   82 (369)
                      .||+|||| |.+|..++..++..|+  +|+|+|+++ .  .+.  +.+    +....         ...+++.   ++|+
T Consensus       314 ~~v~ViGa-G~mG~gIA~~~a~~G~--~V~l~d~~~~~l~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~i~~---~~~~  387 (715)
T PRK11730        314 KQAAVLGA-GIMGGGIAYQSASKGV--PVIMKDINQKALDLGMTEAAKLLNKQVERGKIDGAKMAGVLSSIRP---TLDY  387 (715)
T ss_pred             ceEEEECC-chhHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEE---eCCH
Confidence            58999999 9999999999999998  999999987 1  111  111    11100         0134543   4677


Q ss_pred             hhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCh-hHHHHHHHHHhCCCCCCc
Q 017551           83 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNST-VPIAAEVFKKAGTYDPKK  161 (369)
Q Consensus        83 ~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~-t~i~ae~~~~~~~~~~~k  161 (369)
                       +++++||+||.+.              .+++++.+++..+++++||.. .|++||-..+- +.++ +   ..  -.|.|
T Consensus       388 -~~~~~aDlViEav--------------~E~l~~K~~vf~~l~~~~~~~-~ilasNTSsl~i~~la-~---~~--~~p~r  445 (715)
T PRK11730        388 -AGFERVDVVVEAV--------------VENPKVKAAVLAEVEQKVRED-TILASNTSTISISLLA-K---AL--KRPEN  445 (715)
T ss_pred             -HHhcCCCEEEecc--------------cCcHHHHHHHHHHHHhhCCCC-cEEEEcCCCCCHHHHH-h---hc--CCCcc
Confidence             6799999999995              678999999999999999644 34599988864 4333 2   22  23678


Q ss_pred             EEEec
Q 017551          162 LLGVT  166 (369)
Q Consensus       162 viG~t  166 (369)
                      ++|+.
T Consensus       446 ~~g~H  450 (715)
T PRK11730        446 FCGMH  450 (715)
T ss_pred             EEEEe
Confidence            99874

>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB

Probab=98.55  E-value=3.7e-07  Score=98.27  Aligned_cols=119  Identities=17%  Similarity=0.194  Sum_probs=85.5

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-c--hhH--HHHh----hcc-c--------CCCeEEEEeCCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-T--PGV--TADI----SHM-D--------TGAVVRGFLGQPQ   81 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-~--~g~--~~dL----~~~-~--------~~~~v~~~~~t~d   81 (369)
                      -.||+|||| |.+|..+|..++..|+  +|+|+|++. .  .+.  +.++    .+. .        ...+++.   ++|
T Consensus       313 i~~v~ViGa-G~mG~gIA~~~a~~G~--~V~l~d~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~---~~~  386 (714)
T TIGR02437       313 VKQAAVLGA-GIMGGGIAYQSASKGT--PIVMKDINQHSLDLGLTEAAKLLNKQVERGRITPAKMAGVLNGITP---TLS  386 (714)
T ss_pred             cceEEEECC-chHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEE---eCC
Confidence            369999999 9999999999999998  999999987 1  111  1111    110 0        0134443   467


Q ss_pred             hhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCh-hHHHHHHHHHhCCCCCC
Q 017551           82 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNST-VPIAAEVFKKAGTYDPK  160 (369)
Q Consensus        82 l~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~-t~i~ae~~~~~~~~~~~  160 (369)
                      + +++++||+||.++              .+++++.+++..+++++||.. .|++||-..+- +.++ +    .. -.|.
T Consensus       387 ~-~~~~~aDlViEav--------------~E~l~~K~~vf~~l~~~~~~~-~ilasnTS~l~i~~ia-~----~~-~~p~  444 (714)
T TIGR02437       387 Y-AGFDNVDIVVEAV--------------VENPKVKAAVLAEVEQHVRED-AILASNTSTISISLLA-K----AL-KRPE  444 (714)
T ss_pred             H-HHhcCCCEEEEcC--------------cccHHHHHHHHHHHHhhCCCC-cEEEECCCCCCHHHHH-h----hc-CCcc
Confidence            6 6799999999995              678999999999999999543 24599988864 3332 2    22 2467


Q ss_pred             cEEEec
Q 017551          161 KLLGVT  166 (369)
Q Consensus       161 kviG~t  166 (369)
                      |++|+.
T Consensus       445 r~ig~H  450 (714)
T TIGR02437       445 NFCGMH  450 (714)
T ss_pred             cEEEEe
Confidence            899985

Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.

>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial

Probab=98.54  E-value=2.6e-07  Score=99.75  Aligned_cols=119  Identities=18%  Similarity=0.188  Sum_probs=85.0

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC---chhH--HHHhhcc-----c--------CCCeEEEEeCCCCh
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGV--TADISHM-----D--------TGAVVRGFLGQPQL   82 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~---~~g~--~~dL~~~-----~--------~~~~v~~~~~t~dl   82 (369)
                      .||+|||| |.+|+.++..++..|+  +|+|+|+++   ..+.  +.+..+.     .        ...+++.   ++|+
T Consensus       336 ~~v~ViGa-G~MG~gIA~~~a~~G~--~V~l~d~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~---~~~~  409 (737)
T TIGR02441       336 KTLAVLGA-GLMGAGIAQVSVDKGL--KTVLKDATPAGLDRGQQQVFKGLNKKVKRKKITSLERDSILSNLTP---TLDY  409 (737)
T ss_pred             cEEEEECC-CHhHHHHHHHHHhCCC--cEEEecCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE---eCCH
Confidence            68999999 9999999999999998  999999987   1111  1111110     0        0134543   4677


Q ss_pred             hhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcE
Q 017551           83 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKL  162 (369)
Q Consensus        83 ~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kv  162 (369)
                       +++++||+||.++              .+|+++.+++..+++++||.. .|++||-..+-..-+++    .. -.|.|+
T Consensus       410 -~~~~~aDlViEAv--------------~E~l~~K~~vf~~l~~~~~~~-~ilasNTSsl~i~~la~----~~-~~p~r~  468 (737)
T TIGR02441       410 -SGFKNADMVIEAV--------------FEDLSLKHKVIKEVEAVVPPH-CIIASNTSALPIKDIAA----VS-SRPEKV  468 (737)
T ss_pred             -HHhccCCeehhhc--------------cccHHHHHHHHHHHHhhCCCC-cEEEEcCCCCCHHHHHh----hc-CCccce
Confidence             6899999999995              778999999999999999544 24589988864332222    22 236788


Q ss_pred             EEec
Q 017551          163 LGVT  166 (369)
Q Consensus       163 iG~t  166 (369)
                      +|+.
T Consensus       469 ig~H  472 (737)
T TIGR02441       469 IGMH  472 (737)
T ss_pred             EEEe
Confidence            8873

Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).

>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ

Probab=98.51  E-value=5.7e-07  Score=96.69  Aligned_cols=120  Identities=18%  Similarity=0.272  Sum_probs=84.3

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHh-CCCCcEEEEEeCCC-c--hhH--HHH-hhcc----c--------CCCeEEEEeCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKI-NPLVSVLHLYDVVN-T--PGV--TAD-ISHM----D--------TGAVVRGFLGQP   80 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~-~~~~~el~L~D~~~-~--~g~--~~d-L~~~----~--------~~~~v~~~~~t~   80 (369)
                      ..||+|||| |.+|+.++..++. .|+  +|+|+|+++ .  .+.  +.+ |...    .        ...+++.   ++
T Consensus       304 i~~v~ViGa-G~mG~~iA~~~a~~~G~--~V~l~d~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~---~~  377 (699)
T TIGR02440       304 IKKVGILGG-GLMGGGIASVTATKAGI--PVRIKDINPQGINNALKYAWKLLDKGVKRRHMTPAERDNQMALITG---TT  377 (699)
T ss_pred             ccEEEEECC-cHHHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHcCeEE---eC
Confidence            369999999 9999999999884 788  999999987 1  111  111 1110    0        0134443   46


Q ss_pred             ChhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCC
Q 017551           81 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPK  160 (369)
Q Consensus        81 dl~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~  160 (369)
                      |+ ++++|||+||.++              .+++++.+++..+++++|+.. .|++||-..+...-+++.+     -.|.
T Consensus       378 ~~-~~~~~adlViEav--------------~E~l~~K~~v~~~l~~~~~~~-~ilasnTS~l~i~~la~~~-----~~p~  436 (699)
T TIGR02440       378 DY-RGFKDVDIVIEAV--------------FEDLALKHQMVKDIEQECAAH-TIFASNTSSLPIGQIAAAA-----SRPE  436 (699)
T ss_pred             Ch-HHhccCCEEEEec--------------cccHHHHHHHHHHHHhhCCCC-cEEEeCCCCCCHHHHHHhc-----CCcc
Confidence            77 6899999999995              678999999999999999644 3458998886433223322     2467


Q ss_pred             cEEEec
Q 017551          161 KLLGVT  166 (369)
Q Consensus       161 kviG~t  166 (369)
                      |++|+.
T Consensus       437 r~~g~H  442 (699)
T TIGR02440       437 NVIGLH  442 (699)
T ss_pred             cEEEEe
Confidence            888874

Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.

>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed

Probab=98.50  E-value=6.9e-07  Score=96.24  Aligned_cols=119  Identities=18%  Similarity=0.295  Sum_probs=84.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHH-hCCCCcEEEEEeCCC-c--hh--HHHHhh-----ccc--------CCCeEEEEeCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMK-INPLVSVLHLYDVVN-T--PG--VTADIS-----HMD--------TGAVVRGFLGQP   80 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~-~~~~~~el~L~D~~~-~--~g--~~~dL~-----~~~--------~~~~v~~~~~t~   80 (369)
                      -.||+|||| |.+|..+|..++ ..|+  +|+|+|++. .  .+  .+.++.     +..        ...+++.   ++
T Consensus       309 i~~v~ViGa-G~mG~giA~~~a~~~G~--~V~l~d~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~---~~  382 (708)
T PRK11154        309 VNKVGVLGG-GLMGGGIAYVTATKAGL--PVRIKDINPQGINHALKYSWDLLDKKVKRRHLKPSERDKQMALISG---TT  382 (708)
T ss_pred             ccEEEEECC-chhhHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhcEEE---eC
Confidence            369999999 999999999998 7788  999999986 1  11  111111     100        1134554   46


Q ss_pred             ChhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCChhHHHHHHHHHhCCCCC
Q 017551           81 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDP  159 (369)
Q Consensus        81 dl~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~  159 (369)
                      |+ ++++|||+||.+.              .+|.++.+++..+++++| |++  |++||-..+...-+++.+     -.|
T Consensus       383 ~~-~~~~~aDlViEav--------------~E~~~~K~~v~~~le~~~~~~~--ilasnTS~l~i~~la~~~-----~~p  440 (708)
T PRK11154        383 DY-RGFKHADVVIEAV--------------FEDLALKQQMVAEVEQNCAPHT--IFASNTSSLPIGQIAAAA-----ARP  440 (708)
T ss_pred             Ch-HHhccCCEEeecc--------------cccHHHHHHHHHHHHhhCCCCc--EEEECCCCCCHHHHHHhc-----Ccc
Confidence            76 6899999999995              778999999999999999 565  448998886443222222     236


Q ss_pred             CcEEEec
Q 017551          160 KKLLGVT  166 (369)
Q Consensus       160 ~kviG~t  166 (369)
                      .|++|+.
T Consensus       441 ~r~ig~H  447 (708)
T PRK11154        441 EQVIGLH  447 (708)
T ss_pred             cceEEEe
Confidence            7888874

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=98.48  E-value=3e-06  Score=78.37  Aligned_cols=128  Identities=18%  Similarity=0.106  Sum_probs=76.6

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccC--CCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~--~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      |||+|||++|.+|++++..|...+.  +|.++|.+..  .....++.+...  ....+...  ++..++++++|+||++.
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~--~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~--~~~~ea~~~aDvVilav   76 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGN--KIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTG--ADNAEAAKRADVVILAV   76 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCC--EEEEEEcCHHHHHHHHHHHHhhccccCCCceEEE--eChHHHHhcCCEEEEEC
Confidence            6999998449999999999998886  9999998762  222222222110  11111111  23367899999999985


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCh-----------hHHHHHHHHHhCCCCC-CcEEE
Q 017551           97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNST-----------VPIAAEVFKKAGTYDP-KKLLG  164 (369)
Q Consensus        97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~-----------t~i~ae~~~~~~~~~~-~kviG  164 (369)
                      .                ...+.++++.+....++.++|-++||.+.-           ..-.+|.+++.  +|+ .||+.
T Consensus        77 p----------------~~~~~~~l~~l~~~l~~~vvI~~~ngi~~~~~~~~~~~~~~~~s~~e~l~~~--~p~~~~VVk  138 (219)
T TIGR01915        77 P----------------WDHVLKTLESLRDELSGKLVISPVVPLASDGGKGARYLPPEEGSAAEQAAAL--LPETSRVVA  138 (219)
T ss_pred             C----------------HHHHHHHHHHHHHhccCCEEEEeccCceecCCCCceecCCCCCcHHHHHHHh--CCCCCeEee
Confidence            1                111233334444333446788889998751           01113445554  666 67776


Q ss_pred             e-chhcH
Q 017551          165 V-TMLDV  170 (369)
Q Consensus       165 ~-t~Ld~  170 (369)
                      . .++..
T Consensus       139 a~~~~~a  145 (219)
T TIGR01915       139 AFHNLSA  145 (219)
T ss_pred             ccccCCH
Confidence            6 55553

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>KOG2304 consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]

Probab=98.47  E-value=1.8e-07  Score=85.72  Aligned_cols=123  Identities=24%  Similarity=0.326  Sum_probs=90.9

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC------chhHHHHhhccc-----------------CCCeEE
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN------TPGVTADISHMD-----------------TGAVVR   74 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~------~~g~~~dL~~~~-----------------~~~~v~   74 (369)
                      .+...|+|+|| |.+|+.+|...++.++  .|.|+|.++      .+++...+.+..                 +..+++
T Consensus         9 ~~~~~V~ivGa-G~MGSGIAQv~a~sg~--~V~l~d~~~~aL~~A~~~I~~sl~rvakKk~~~~~~~~~e~v~~~l~ri~   85 (298)
T KOG2304|consen    9 AEIKNVAIVGA-GQMGSGIAQVAATSGL--NVWLVDANEDALSRATKAISSSLKRVAKKKKADDPVALEEFVDDTLDRIK   85 (298)
T ss_pred             ccccceEEEcc-cccchhHHHHHHhcCC--ceEEecCCHHHHHHHHHHHHHHHHHHHhhcccCChhhHHHHHHHHHHHHH
Confidence            44569999999 9999999999999999  999999997      123333232221                 011223


Q ss_pred             EEeCCCChhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCC-hhHHHHHHHHH
Q 017551           75 GFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS-TVPIAAEVFKK  153 (369)
Q Consensus        75 ~~~~t~dl~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~-~t~i~ae~~~~  153 (369)
                      .   ++|...+++|||+||.++              -+|+.+.+++.+++++.|+.. -|++||-..+ ++.++ -++  
T Consensus        86 ~---~tnv~~~v~dadliiEAi--------------vEn~diK~~lF~~l~~~ak~~-~il~tNTSSl~lt~ia-~~~--  144 (298)
T KOG2304|consen   86 T---STNVSDAVSDADLIIEAI--------------VENLDIKRKLFKDLDKIAKSS-TILATNTSSLSLTDIA-SAT--  144 (298)
T ss_pred             H---cCCHHHhhhhhHHHHHHH--------------HHhHHHHHHHHHHHHhhcccc-eEEeecccceeHHHHH-hhc--
Confidence            2   468889999999999884              899999999999999999755 3458998876 55443 111  


Q ss_pred             hCCCCCCcEEEech
Q 017551          154 AGTYDPKKLLGVTM  167 (369)
Q Consensus       154 ~~~~~~~kviG~t~  167 (369)
                         -+|.|+.|+..
T Consensus       145 ---~~~srf~GlHF  155 (298)
T KOG2304|consen  145 ---QRPSRFAGLHF  155 (298)
T ss_pred             ---cChhhhceeec
Confidence               34679999964

>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC

Probab=98.40  E-value=2.3e-06  Score=88.71  Aligned_cols=124  Identities=21%  Similarity=0.318  Sum_probs=82.9

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc---hhH--HH----Hhhccc---------CCCeEEEEeCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGV--TA----DISHMD---------TGAVVRGFLGQP   80 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~---~g~--~~----dL~~~~---------~~~~v~~~~~t~   80 (369)
                      +..||+|||+ |.+|+.+|..++..|+  +|++||++..   .+.  ..    .+....         ...+++.   ++
T Consensus         4 ~~~kV~VIGa-G~MG~gIA~~la~aG~--~V~l~d~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~---~~   77 (503)
T TIGR02279         4 NVVTVAVIGA-GAMGAGIAQVAASAGH--QVLLYDIRAEALARAIAGIEARLNSLVTKGKLTAEECERTLKRLIP---VT   77 (503)
T ss_pred             CccEEEEECc-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccEE---eC
Confidence            3468999999 9999999999999998  9999999871   111  11    111110         0123443   45


Q ss_pred             ChhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCC
Q 017551           81 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPK  160 (369)
Q Consensus        81 dl~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~  160 (369)
                      ++ +++++||+||.+.              .++..+.+.+...+.+++|.. .|++||-..+-..-+++.+     -.|.
T Consensus        78 ~~-~~l~~aDlVIEav--------------~E~~~vK~~vf~~l~~~~~~~-~IlasnTStl~i~~iA~~~-----~~p~  136 (503)
T TIGR02279        78 DL-HALADAGLVIEAI--------------VENLEVKKALFAQLEELCPAD-TIIASNTSSLSITAIAAGL-----ARPE  136 (503)
T ss_pred             CH-HHhCCCCEEEEcC--------------cCcHHHHHHHHHHHHhhCCCC-eEEEECCCCCCHHHHHHhc-----Cccc
Confidence            66 5789999999985              567788888888999999655 3468888776443222222     1245


Q ss_pred             cEEEechhc
Q 017551          161 KLLGVTMLD  169 (369)
Q Consensus       161 kviG~t~Ld  169 (369)
                      |++|+..++
T Consensus       137 r~~G~HFf~  145 (503)
T TIGR02279       137 RVAGLHFFN  145 (503)
T ss_pred             ceEEEeccC
Confidence            677765443

This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=98.39  E-value=1.2e-06  Score=76.99  Aligned_cols=93  Identities=24%  Similarity=0.326  Sum_probs=63.2

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhccc--------CCCeEEEEeCCCChhhhcCCCcEEE
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD--------TGAVVRGFLGQPQLENALTGMDLVI   93 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~--------~~~~v~~~~~t~dl~~al~~ADiVi   93 (369)
                      ||+|+|| |..|+++|..|..++.  +|.||+.++.....+.-.|..        ....+..   ++|+++++++||+||
T Consensus         1 KI~ViGa-G~~G~AlA~~la~~g~--~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~---t~dl~~a~~~ad~Ii   74 (157)
T PF01210_consen    1 KIAVIGA-GNWGTALAALLADNGH--EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKA---TTDLEEALEDADIII   74 (157)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHCTE--EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEE---ESSHHHHHTT-SEEE
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCC--EEEEEeccHHHHHHHHHhCCCCCCCCCcccCccccc---ccCHHHHhCcccEEE
Confidence            8999999 9999999999999997  999999986222222222221        1124443   578999999999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCC-eEEEEe
Q 017551           94 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPN-ATVNLI  136 (369)
Q Consensus        94 i~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~-a~viv~  136 (369)
                      ++.  |              ....+++++++..+-++ ..++++
T Consensus        75 iav--P--------------s~~~~~~~~~l~~~l~~~~~ii~~  102 (157)
T PF01210_consen   75 IAV--P--------------SQAHREVLEQLAPYLKKGQIIISA  102 (157)
T ss_dssp             E-S-----------------GGGHHHHHHHHTTTSHTT-EEEET
T ss_pred             ecc--c--------------HHHHHHHHHHHhhccCCCCEEEEe
Confidence            983  2              23366788888888744 444443

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.38  E-value=3.9e-06  Score=80.44  Aligned_cols=118  Identities=21%  Similarity=0.368  Sum_probs=77.9

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc---hhH--H----HHhhccc---------CCCeEEEEeCCCCh
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGV--T----ADISHMD---------TGAVVRGFLGQPQL   82 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~---~g~--~----~dL~~~~---------~~~~v~~~~~t~dl   82 (369)
                      .||+|||+ |.||..++..++..+.  +|+++|++..   .+.  .    ..+....         ...+++.   ++|+
T Consensus         4 ~kI~VIG~-G~mG~~ia~~la~~g~--~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~l~~---~~~~   77 (282)
T PRK05808          4 QKIGVIGA-GTMGNGIAQVCAVAGY--DVVMVDISDAAVDRGLATITKSLDRLVKKGKMTEADKEAALARITG---TTDL   77 (282)
T ss_pred             cEEEEEcc-CHHHHHHHHHHHHCCC--ceEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE---eCCH
Confidence            48999999 9999999999999987  9999999872   111  0    0111110         0123443   3566


Q ss_pred             hhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCChhHHHHHHHHHhCCCCCCc
Q 017551           83 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPKK  161 (369)
Q Consensus        83 ~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~k  161 (369)
                       +++++||+||+++              ..+..+.+++...+.++++ ++++  +||-.++-...++    ...+ .+.|
T Consensus        78 -~~~~~aDlVi~av--------------~e~~~~k~~~~~~l~~~~~~~~il--~s~ts~~~~~~la----~~~~-~~~r  135 (282)
T PRK05808         78 -DDLKDADLVIEAA--------------TENMDLKKKIFAQLDEIAKPEAIL--ATNTSSLSITELA----AATK-RPDK  135 (282)
T ss_pred             -HHhccCCeeeecc--------------cccHHHHHHHHHHHHhhCCCCcEE--EECCCCCCHHHHH----HhhC-CCcc
Confidence             5689999999995              4456777888899999885 5533  6777665433222    2212 2457


Q ss_pred             EEEec
Q 017551          162 LLGVT  166 (369)
Q Consensus       162 viG~t  166 (369)
                      ++|+.
T Consensus       136 ~ig~h  140 (282)
T PRK05808        136 VIGMH  140 (282)
T ss_pred             eEEee
Confidence            77764

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=98.35  E-value=5.2e-06  Score=79.96  Aligned_cols=119  Identities=13%  Similarity=0.231  Sum_probs=76.8

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHH--------hh---cccC---------CCeEEEEeCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTAD--------IS---HMDT---------GAVVRGFLGQ   79 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~d--------L~---~~~~---------~~~v~~~~~t   79 (369)
                      .||+|||+ |.+|+.++..++..+.  +|+++|+++. ...+.+        +.   +...         ..++..   +
T Consensus         4 ~~I~ViGa-G~mG~~iA~~la~~G~--~V~l~d~~~~~l~~~~~~i~~~~~~l~~~~~~g~~~~~~~~~~~~~i~~---~   77 (291)
T PRK06035          4 KVIGVVGS-GVMGQGIAQVFARTGY--DVTIVDVSEEILKNAMELIESGPYGLRNLVEKGKMSEDEAKAIMARIRT---S   77 (291)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhcCC--eEEEEeCCHHHHHHHHHHHHhhhhhHHHHHHcCCCCHHHHHHHHhCcEe---e
Confidence            58999999 9999999999999988  9999999871 111111        11   1000         112332   3


Q ss_pred             CChhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCChhHHHHHHHHHhCCCC
Q 017551           80 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYD  158 (369)
Q Consensus        80 ~dl~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~i~ae~~~~~~~~~  158 (369)
                      +++ +++++||+||++.              ..+..+.+++.++++++++ ++++  +||-..+...-++   ...  -.
T Consensus        78 ~~~-~~~~~aDlVieav--------------~e~~~~k~~~~~~l~~~~~~~~il--~S~tsg~~~~~la---~~~--~~  135 (291)
T PRK06035         78 TSY-ESLSDADFIVEAV--------------PEKLDLKRKVFAELERNVSPETII--ASNTSGIMIAEIA---TAL--ER  135 (291)
T ss_pred             CCH-HHhCCCCEEEEcC--------------cCcHHHHHHHHHHHHhhCCCCeEE--EEcCCCCCHHHHH---hhc--CC
Confidence            566 6799999999995              3345667788888888875 4543  5776655432222   121  13


Q ss_pred             CCcEEEech
Q 017551          159 PKKLLGVTM  167 (369)
Q Consensus       159 ~~kviG~t~  167 (369)
                      +.|++|+..
T Consensus       136 ~~r~ig~hf  144 (291)
T PRK06035        136 KDRFIGMHW  144 (291)
T ss_pred             cccEEEEec
Confidence            567888754

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=98.32  E-value=7.8e-06  Score=84.03  Aligned_cols=122  Identities=15%  Similarity=0.172  Sum_probs=79.6

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHH-------------HHhhcccCCCeEEEEeCCCChhhhc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVT-------------ADISHMDTGAVVRGFLGQPQLENAL   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~-------------~dL~~~~~~~~v~~~~~t~dl~~al   86 (369)
                      .|||+|||+ |.+|.+++..|+..+..-+|+.+|+++.+-..             .+|.......+++.   ++|+.+++
T Consensus         1 ~m~I~ViG~-GyvGl~~A~~lA~~g~g~~V~gvD~~~~~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~---t~~~~~~i   76 (473)
T PLN02353          1 MVKICCIGA-GYVGGPTMAVIALKCPDIEVVVVDISVPRIDAWNSDQLPIYEPGLDEVVKQCRGKNLFF---STDVEKHV   76 (473)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCeEEEEECCHHHHHHHHcCCCccCCCCHHHHHHHhhcCCEEE---EcCHHHHH
Confidence            479999999 99999999999998644489999998722111             01110001112443   46777899


Q ss_pred             CCCcEEEEcCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe--cCCCCChhHHH
Q 017551           87 TGMDLVIIPAGVPRKPGM-TRDDLFNINAGIVRTLCEGIAKCCPNATVNLI--SNPVNSTVPIA  147 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~g~-~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~--tNPv~~~t~i~  147 (369)
                      ++||++|++.+.|.+..- .. + -.-++..+.+.++.|.++.++..+++.  |.|.++.-.+.
T Consensus        77 ~~advi~I~V~TP~~~~g~~~-~-~~~Dls~v~~a~~~i~~~l~~~~lVv~~STvp~Gtt~~~~  138 (473)
T PLN02353         77 AEADIVFVSVNTPTKTRGLGA-G-KAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIE  138 (473)
T ss_pred             hcCCEEEEEeCCCCCCCCCcC-C-CCCcHHHHHHHHHHHHhhCCCCcEEEEeCCCCCChHHHHH
Confidence            999999999999875421 00 0 012345567777888877755544443  78888765554

>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated

Probab=98.30  E-value=4.7e-06  Score=86.49  Aligned_cols=122  Identities=20%  Similarity=0.267  Sum_probs=80.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc---hh--HHHH----hhccc---------CCCeEEEEeCCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PG--VTAD----ISHMD---------TGAVVRGFLGQPQ   81 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~---~g--~~~d----L~~~~---------~~~~v~~~~~t~d   81 (369)
                      ..||+|||+ |.+|+.++..++..|+  +|+++|++..   .+  .+.+    +....         ...+++.   +++
T Consensus         7 i~~V~VIGa-G~MG~gIA~~la~aG~--~V~l~D~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~---~~~   80 (507)
T PRK08268          7 IATVAVIGA-GAMGAGIAQVAAQAGH--TVLLYDARAGAAAAARDGIAARLAKLVEKGKLTAEQADAALARLRP---VEA   80 (507)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE---eCC
Confidence            358999999 9999999999999998  9999999871   11  1111    11100         0123454   346


Q ss_pred             hhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCChhHHHHHHHHHhCCCCCC
Q 017551           82 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPK  160 (369)
Q Consensus        82 l~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~  160 (369)
                      + +++++||+||.+.              .++..+.+.+...++++++ +++  ++||-..+-..-+++    .. -.|.
T Consensus        81 ~-~~~~~aDlViEav--------------~E~~~vK~~vf~~l~~~~~~~ai--lasntStl~i~~la~----~~-~~p~  138 (507)
T PRK08268         81 L-ADLADCDLVVEAI--------------VERLDVKQALFAQLEAIVSPDCI--LATNTSSLSITAIAA----AL-KHPE  138 (507)
T ss_pred             H-HHhCCCCEEEEcC--------------cccHHHHHHHHHHHHhhCCCCcE--EEECCCCCCHHHHHh----hc-CCcc
Confidence            6 5688999999985              5677888888888999985 553  366766543222222    21 2356


Q ss_pred             cEEEechhc
Q 017551          161 KLLGVTMLD  169 (369)
Q Consensus       161 kviG~t~Ld  169 (369)
                      |++|+..++
T Consensus       139 r~~G~hff~  147 (507)
T PRK08268        139 RVAGLHFFN  147 (507)
T ss_pred             cEEEEeecC
Confidence            788875444

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.26  E-value=5e-06  Score=79.98  Aligned_cols=121  Identities=18%  Similarity=0.238  Sum_probs=73.9

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhH---HHHhh-----cccC--------CCeEEEEeCCCCh
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGV---TADIS-----HMDT--------GAVVRGFLGQPQL   82 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~---~~dL~-----~~~~--------~~~v~~~~~t~dl   82 (369)
                      .||+|||+ |.+|..++..++..++  +|++||+++.  ...   ..++.     ....        ..+++.   ++++
T Consensus         2 ~~V~VIG~-G~mG~~iA~~la~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~---~~~~   75 (288)
T PRK09260          2 EKLVVVGA-GVMGRGIAYVFAVSGF--QTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSY---SLDL   75 (288)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhCCC--cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE---eCcH
Confidence            48999999 9999999999999988  9999999871  111   01110     0000        112333   4577


Q ss_pred             hhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcE
Q 017551           83 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKL  162 (369)
Q Consensus        83 ~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kv  162 (369)
                      ++++++||+||++.              ..+..+.+.+..++.++++... ++++|...+-...++    ... -.+.|+
T Consensus        76 ~~~~~~aD~Vi~av--------------pe~~~~k~~~~~~l~~~~~~~~-il~~~tSt~~~~~l~----~~~-~~~~r~  135 (288)
T PRK09260         76 KAAVADADLVIEAV--------------PEKLELKKAVFETADAHAPAEC-YIATNTSTMSPTEIA----SFT-KRPERV  135 (288)
T ss_pred             HHhhcCCCEEEEec--------------cCCHHHHHHHHHHHHhhCCCCc-EEEEcCCCCCHHHHH----hhc-CCcccE
Confidence            78999999999984              2234556666667777775442 234555543222121    211 124567


Q ss_pred             EEech
Q 017551          163 LGVTM  167 (369)
Q Consensus       163 iG~t~  167 (369)
                      +|+..
T Consensus       136 ~g~h~  140 (288)
T PRK09260        136 IAMHF  140 (288)
T ss_pred             EEEec
Confidence            77743

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.23  E-value=1.6e-05  Score=76.62  Aligned_cols=122  Identities=20%  Similarity=0.304  Sum_probs=76.1

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHH----Hhh----cccC--------CCeEEEEeCCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTA----DIS----HMDT--------GAVVRGFLGQPQ   81 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~----dL~----~~~~--------~~~v~~~~~t~d   81 (369)
                      .+||+|||+ |.+|..++..++.++.  +|++||.+..  .....    .+.    ....        ..+++.   +++
T Consensus         4 ~~kI~vIGa-G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~---~~~   77 (292)
T PRK07530          4 IKKVGVIGA-GQMGNGIAHVCALAGY--DVLLNDVSADRLEAGLATINGNLARQVAKGKISEEARAAALARIST---ATD   77 (292)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEe---eCC
Confidence            459999999 9999999999999988  9999999861  11111    111    1000        022443   356


Q ss_pred             hhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCChhHHHHHHHHHhCCCCCC
Q 017551           82 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPK  160 (369)
Q Consensus        82 l~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~  160 (369)
                      + +++++||+||++.              ..+..+.+.+.+.+.++++ ++++  +||-..+-..-++   ...  -.+.
T Consensus        78 ~-~~~~~aD~Vieav--------------pe~~~~k~~~~~~l~~~~~~~~ii--~s~ts~~~~s~la---~~~--~~~~  135 (292)
T PRK07530         78 L-EDLADCDLVIEAA--------------TEDETVKRKIFAQLCPVLKPEAIL--ATNTSSISITRLA---SAT--DRPE  135 (292)
T ss_pred             H-HHhcCCCEEEEcC--------------cCCHHHHHHHHHHHHhhCCCCcEE--EEcCCCCCHHHHH---hhc--CCcc
Confidence            6 5789999999984              2234555666677888874 5543  4666554321121   221  2356


Q ss_pred             cEEEechhc
Q 017551          161 KLLGVTMLD  169 (369)
Q Consensus       161 kviG~t~Ld  169 (369)
                      |++|+..++
T Consensus       136 r~~g~h~~~  144 (292)
T PRK07530        136 RFIGIHFMN  144 (292)
T ss_pred             cEEEeeccC
Confidence            888886555

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=98.22  E-value=1.6e-05  Score=81.03  Aligned_cols=113  Identities=14%  Similarity=0.050  Sum_probs=76.6

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      ++|||.|+||+|+||++++..|...+.  +|+.+|.... +....+.+......+.... .+-+..++.++|+||.+|+.
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~--~V~~ldr~~~-~~~~~~~~~~~~~~~~~~~-~Di~~~~~~~~D~ViHlAa~  194 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGD--EVIVIDNFFT-GRKENLVHLFGNPRFELIR-HDVVEPILLEVDQIYHLACP  194 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCC--EEEEEeCCCC-ccHhHhhhhccCCceEEEE-CccccccccCCCEEEECcee
Confidence            358999999999999999999999887  9999997531 1111111111112344332 12233567899999999875


Q ss_pred             CC--CCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           99 PR--KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        99 p~--k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ..  ....+..+++..|+....++++.+.+...  .+|++|
T Consensus       195 ~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~--r~V~~S  233 (436)
T PLN02166        195 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--RFLLTS  233 (436)
T ss_pred             ccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC--EEEEEC
Confidence            32  22234567788999999999999988753  455554

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.21  E-value=1.8e-05  Score=76.89  Aligned_cols=121  Identities=23%  Similarity=0.309  Sum_probs=73.5

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhccc-----------CCCeEEEEeCCCChhhhc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMD-----------TGAVVRGFLGQPQLENAL   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~-----------~~~~v~~~~~t~dl~~al   86 (369)
                      .+||+|||+ |.+|..++..|+..+.  +|+++|.+..  ......+.+..           ...+++.   ++|+.+++
T Consensus         4 ~~~I~vIGa-G~mG~~iA~~l~~~g~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~~~~~   77 (311)
T PRK06130          4 IQNLAIIGA-GTMGSGIAALFARKGL--QVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRM---EAGLAAAV   77 (311)
T ss_pred             ccEEEEECC-CHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEE---eCCHHHHh
Confidence            359999999 9999999999999887  9999999761  11111111000           0012332   35677789


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEec
Q 017551           87 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT  166 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t  166 (369)
                      ++||+||++.              ........++...+..+++... +++||...+...-++   ...  -.+.+++|+.
T Consensus        78 ~~aDlVi~av--------------~~~~~~~~~v~~~l~~~~~~~~-ii~s~tsg~~~~~l~---~~~--~~~~~~ig~h  137 (311)
T PRK06130         78 SGADLVIEAV--------------PEKLELKRDVFARLDGLCDPDT-IFATNTSGLPITAIA---QAV--TRPERFVGTH  137 (311)
T ss_pred             ccCCEEEEec--------------cCcHHHHHHHHHHHHHhCCCCc-EEEECCCCCCHHHHH---hhc--CCcccEEEEc
Confidence            9999999984              2223445566666777765432 335666665432221   222  1246788874

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=98.18  E-value=1.4e-05  Score=76.83  Aligned_cols=108  Identities=19%  Similarity=0.269  Sum_probs=76.4

Q ss_pred             EEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEE-eCCCChhhhcCCCcEEEEcCCCCCCC
Q 017551           24 AILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQLENALTGMDLVIIPAGVPRKP  102 (369)
Q Consensus        24 ~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~-~~t~dl~~al~~ADiVii~ag~p~k~  102 (369)
                      .|+||+|++|++++..|..++...+|+.+|+........++.......-+... +...++.+|++++|+||.+|+...-.
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~~   80 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVPPW   80 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccccc
Confidence            38999999999999999999866699999987632221222222110012221 22457889999999999998753223


Q ss_pred             C-CCHHHHHHHHHHHHHHHHHHHhhhCCCe
Q 017551          103 G-MTRDDLFNINAGIVRTLCEGIAKCCPNA  131 (369)
Q Consensus       103 g-~~r~~~~~~N~~i~~~i~~~i~~~~p~a  131 (369)
                      + .....+...|+.-.+.+.+...+..-+.
T Consensus        81 ~~~~~~~~~~vNV~GT~nvl~aa~~~~Vkr  110 (280)
T PF01073_consen   81 GDYPPEEYYKVNVDGTRNVLEAARKAGVKR  110 (280)
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHHHcCCCE
Confidence            3 4567788999999999999999875554

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=98.13  E-value=4.9e-05  Score=74.02  Aligned_cols=119  Identities=20%  Similarity=0.364  Sum_probs=79.6

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhh--ccc--------CCCeEEEEeCCCChhhhcCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADIS--HMD--------TGAVVRGFLGQPQLENALTGM   89 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~--~~~--------~~~~v~~~~~t~dl~~al~~A   89 (369)
                      ++||+|+|| |.-|+++|..|+.+++  +++||..++.  ++.++.  |..        .++.+..   ++|+.+++++|
T Consensus         1 ~~kI~ViGa-GswGTALA~~la~ng~--~V~lw~r~~~--~~~~i~~~~~N~~yLp~i~lp~~l~a---t~Dl~~a~~~a   72 (329)
T COG0240           1 MMKIAVIGA-GSWGTALAKVLARNGH--EVRLWGRDEE--IVAEINETRENPKYLPGILLPPNLKA---TTDLAEALDGA   72 (329)
T ss_pred             CceEEEEcC-ChHHHHHHHHHHhcCC--eeEEEecCHH--HHHHHHhcCcCccccCCccCCccccc---ccCHHHHHhcC
Confidence            369999999 9999999999999997  9999999862  222333  222        1233443   67999999999


Q ss_pred             cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCC-hhHHHHHHHHHhCCCCCCcEEEe
Q 017551           90 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNS-TVPIAAEVFKKAGTYDPKKLLGV  165 (369)
Q Consensus        90 DiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~-~t~i~ae~~~~~~~~~~~kviG~  165 (369)
                      |+||+..  |              ...++++++++..+- ++..++.+|-=.+. ....++++++..  +|.++ +++
T Consensus        73 d~iv~av--P--------------s~~~r~v~~~l~~~l~~~~~iv~~sKGie~~t~~l~seii~e~--l~~~~-~~v  131 (329)
T COG0240          73 DIIVIAV--P--------------SQALREVLRQLKPLLLKDAIIVSATKGLEPETGRLLSEIIEEE--LPDNP-IAV  131 (329)
T ss_pred             CEEEEEC--C--------------hHHHHHHHHHHhhhccCCCeEEEEeccccCCCcchHHHHHHHH--cCCCe-EEE
Confidence            9999983  3              345667777775443 67777777622111 223345666665  55555 444

>PLN02545 3-hydroxybutyryl-CoA dehydrogenase

Probab=98.13  E-value=2.2e-05  Score=75.67  Aligned_cols=122  Identities=20%  Similarity=0.325  Sum_probs=76.9

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch-hHH--------HHhhcccC---------CCeEEEEeCCCCh
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVT--------ADISHMDT---------GAVVRGFLGQPQL   82 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~-g~~--------~dL~~~~~---------~~~v~~~~~t~dl   82 (369)
                      .||+|||+ |.+|+.++..++..+.  +|++||.+... ..+        .++.....         ...+..   ++++
T Consensus         5 ~~V~vIG~-G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~   78 (295)
T PLN02545          5 KKVGVVGA-GQMGSGIAQLAAAAGM--DVWLLDSDPAALSRGLDSISSSLARLVKKGKMSQEEADATLGRIRC---TTNL   78 (295)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceEe---eCCH
Confidence            58999999 9999999999999887  99999998621 110        11211100         012222   3455


Q ss_pred             hhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCChhHHHHHHHHHhCCCCCCc
Q 017551           83 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPKK  161 (369)
Q Consensus        83 ~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~k  161 (369)
                       +++++||+||++.              .++..+...+...+.++++ +++  ++||-..+...-+    ..... .+.+
T Consensus        79 -~~~~~aD~Vieav--------------~e~~~~k~~v~~~l~~~~~~~~i--l~s~tS~i~~~~l----~~~~~-~~~r  136 (295)
T PLN02545         79 -EELRDADFIIEAI--------------VESEDLKKKLFSELDRICKPSAI--LASNTSSISITRL----ASATQ-RPQQ  136 (295)
T ss_pred             -HHhCCCCEEEEcC--------------ccCHHHHHHHHHHHHhhCCCCcE--EEECCCCCCHHHH----HhhcC-CCcc
Confidence             6789999999995              4455667777777887774 553  3566666532222    22211 2467


Q ss_pred             EEEechhcH
Q 017551          162 LLGVTMLDV  170 (369)
Q Consensus       162 viG~t~Ld~  170 (369)
                      ++|+...+-
T Consensus       137 ~~g~h~~~p  145 (295)
T PLN02545        137 VIGMHFMNP  145 (295)
T ss_pred             eEEEeccCC
Confidence            888865443

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=98.12  E-value=2.6e-05  Score=80.86  Aligned_cols=104  Identities=14%  Similarity=0.128  Sum_probs=71.0

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchh-HHHH--------hh---cccC--CCeEEEEeCCCChhhh
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG-VTAD--------IS---HMDT--GAVVRGFLGQPQLENA   85 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g-~~~d--------L~---~~~~--~~~v~~~~~t~dl~~a   85 (369)
                      .+||+|||+ |.||+.++..++..|+  +|.+||++.... ...+        +.   ....  ..+++.   ++++.++
T Consensus         4 i~kIavIG~-G~MG~~iA~~la~~G~--~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~---~~~~~ea   77 (495)
T PRK07531          4 IMKAACIGG-GVIGGGWAARFLLAGI--DVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTF---CASLAEA   77 (495)
T ss_pred             cCEEEEECc-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEe---eCCHHHH
Confidence            359999999 9999999999999998  999999986211 1111        00   0000  112332   4577789


Q ss_pred             cCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChh
Q 017551           86 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTV  144 (369)
Q Consensus        86 l~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t  144 (369)
                      +++||+|+.+.              ..+..+.+.+...+.+++|+.. ++.||-.++..
T Consensus        78 ~~~aD~Vieav--------------pe~~~vk~~l~~~l~~~~~~~~-iI~SsTsgi~~  121 (495)
T PRK07531         78 VAGADWIQESV--------------PERLDLKRRVLAEIDAAARPDA-LIGSSTSGFLP  121 (495)
T ss_pred             hcCCCEEEEcC--------------cCCHHHHHHHHHHHHhhCCCCc-EEEEcCCCCCH
Confidence            99999999984              3345666777777888886553 45777777643

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=98.09  E-value=3e-05  Score=75.34  Aligned_cols=122  Identities=21%  Similarity=0.241  Sum_probs=75.2

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch-hHHH--------HhhcccC---------CCeEEEEeCCCCh
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTA--------DISHMDT---------GAVVRGFLGQPQL   82 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~-g~~~--------dL~~~~~---------~~~v~~~~~t~dl   82 (369)
                      +||+|||+ |.+|+.++..|+..++  +|++||.+... ..+.        .+.....         ..+++.   ++++
T Consensus         3 ~~V~VIG~-G~mG~~iA~~la~~G~--~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~---~~~~   76 (308)
T PRK06129          3 GSVAIIGA-GLIGRAWAIVFARAGH--EVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRV---TDSL   76 (308)
T ss_pred             cEEEEECc-cHHHHHHHHHHHHCCC--eeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEE---ECcH
Confidence            58999998 9999999999999998  99999998611 1100        1111110         122343   4578


Q ss_pred             hhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcE
Q 017551           83 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKL  162 (369)
Q Consensus        83 ~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kv  162 (369)
                      .+++++||+|+.+.              ..+..+.+.+...+.+.+++..++ .||-......-++   ....  .+.++
T Consensus        77 ~~a~~~ad~Vi~av--------------pe~~~~k~~~~~~l~~~~~~~~ii-~ssts~~~~~~la---~~~~--~~~~~  136 (308)
T PRK06129         77 ADAVADADYVQESA--------------PENLELKRALFAELDALAPPHAIL-ASSTSALLASAFT---EHLA--GRERC  136 (308)
T ss_pred             HHhhCCCCEEEECC--------------cCCHHHHHHHHHHHHHhCCCcceE-EEeCCCCCHHHHH---HhcC--CcccE
Confidence            78899999999984              223445555666777777665444 4555443332121   2221  24567


Q ss_pred             EEechh
Q 017551          163 LGVTML  168 (369)
Q Consensus       163 iG~t~L  168 (369)
                      ++.+..
T Consensus       137 ~~~hp~  142 (308)
T PRK06129        137 LVAHPI  142 (308)
T ss_pred             EEEecC
Confidence            776544

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=98.04  E-value=1.9e-05  Score=75.98  Aligned_cols=121  Identities=20%  Similarity=0.183  Sum_probs=76.7

Q ss_pred             EEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEE----EeC-C---CChhhhcC--CCc
Q 017551           23 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRG----FLG-Q---PQLENALT--GMD   90 (369)
Q Consensus        23 I~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~----~~~-t---~dl~~al~--~AD   90 (369)
                      |.|+||+|++|+.++..|+..++ .+|+++|.++  ......++.......+++.    ..+ -   ..+..+++  +.|
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p-~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pd   79 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGP-KKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPD   79 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB--SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-S
T ss_pred             CEEEccccHHHHHHHHHHHhcCC-CeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCC
Confidence            68999999999999999998864 5899999998  3444455532111122321    111 1   22456777  999


Q ss_pred             EEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec----CCCCChh
Q 017551           91 LVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS----NPVNSTV  144 (369)
Q Consensus        91 iVii~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t----NPv~~~t  144 (369)
                      +|+.+|..-.-|  .....+.+..|+--.+.+++...++.-+-+|.+-|    ||+++|-
T Consensus        80 iVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv~PtnvmG  139 (293)
T PF02719_consen   80 IVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAVNPTNVMG  139 (293)
T ss_dssp             EEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCSS--SHHH
T ss_pred             EEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccCCCCcHHH
Confidence            999998753322  23467778999999999999999998777776664    7777763

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02427 UDP-apiose/xylose synthase

Probab=98.04  E-value=4.8e-05  Score=75.84  Aligned_cols=114  Identities=17%  Similarity=0.085  Sum_probs=73.0

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhC-CCCcEEEEEeCCCchhHHHHhhcc---cCCCeEEEEeC----CCChhhhcCCCc
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHM---DTGAVVRGFLG----QPQLENALTGMD   90 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~-~~~~el~L~D~~~~~g~~~dL~~~---~~~~~v~~~~~----t~dl~~al~~AD   90 (369)
                      ++|||.|+||+|++|++++..|..+ +.  +|+.+|.+....  ..+...   ....+++...+    ..++.++++++|
T Consensus        13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~--~V~~l~r~~~~~--~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d   88 (386)
T PLN02427         13 KPLTICMIGAGGFIGSHLCEKLMTETPH--KVLALDVYNDKI--KHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMAD   88 (386)
T ss_pred             cCcEEEEECCcchHHHHHHHHHHhcCCC--EEEEEecCchhh--hhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCC
Confidence            4689999999999999999999987 46  899999754211  111111   01123333221    234567788999


Q ss_pred             EEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 017551           91 LVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        91 iVii~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      +||.+|+.....  .....+.+..|+.....+.+..++..  ..++++|.
T Consensus        89 ~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~--~r~v~~SS  136 (386)
T PLN02427         89 LTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFST  136 (386)
T ss_pred             EEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC--CEEEEEee
Confidence            999999864211  12234556678887888888877654  34565653

>PLN02650 dihydroflavonol-4-reductase

Probab=97.99  E-value=0.00014  Score=71.49  Aligned_cols=118  Identities=13%  Similarity=0.070  Sum_probs=75.8

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch-hHHHHhhcc-cCCCeEEEEe----CCCChhhhcCCCcE
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHM-DTGAVVRGFL----GQPQLENALTGMDL   91 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~-g~~~dL~~~-~~~~~v~~~~----~t~dl~~al~~ADi   91 (369)
                      +..++|.|+||+|++|++++..|+..+.  +|++++.+... ....++... .....+..+.    ....+.++++++|+
T Consensus         3 ~~~k~iLVTGatGfIGs~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~   80 (351)
T PLN02650          3 SQKETVCVTGASGFIGSWLVMRLLERGY--TVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTG   80 (351)
T ss_pred             CCCCEEEEeCCcHHHHHHHHHHHHHCCC--EEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCE
Confidence            4456999999999999999999999887  88888776511 111222111 0111222221    12345678889999


Q ss_pred             EEEcCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           92 VIIPAGVPRKPGMT-RDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        92 Vii~ag~p~k~g~~-r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ||.+|+........ ....+..|+.....+.+.+.+...-..++++|
T Consensus        81 ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~S  127 (351)
T PLN02650         81 VFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTS  127 (351)
T ss_pred             EEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEec
Confidence            99998753211112 23567889999999999988765333455554

>PLN02206 UDP-glucuronate decarboxylase

Probab=97.99  E-value=6.6e-05  Score=76.72  Aligned_cols=113  Identities=16%  Similarity=0.062  Sum_probs=74.9

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      +.|||.|+||+|+||++++..|..++.  +|+.+|..... ....+.+.....+++...+ +-+..++.++|+||.+|+.
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~--~V~~ld~~~~~-~~~~~~~~~~~~~~~~i~~-D~~~~~l~~~D~ViHlAa~  193 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGD--SVIVVDNFFTG-RKENVMHHFSNPNFELIRH-DVVEPILLEVDQIYHLACP  193 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcC--EEEEEeCCCcc-chhhhhhhccCCceEEEEC-CccChhhcCCCEEEEeeee
Confidence            458999999999999999999999987  89999864310 0011111111233343321 1233567899999999875


Q ss_pred             CC--CCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           99 PR--KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        99 p~--k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ..  .........+..|+.....+.+.+.+..  ..+|++|
T Consensus       194 ~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g--~r~V~~S  232 (442)
T PLN02206        194 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG--ARFLLTS  232 (442)
T ss_pred             cchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC--CEEEEEC
Confidence            32  1123456778899999999999998775  3555554

>PLN00198 anthocyanidin reductase; Provisional

Probab=97.99  E-value=0.00015  Score=70.89  Aligned_cols=116  Identities=16%  Similarity=0.125  Sum_probs=73.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHhhcccCCCeEEEEeC----CCChhhhcCCCcEEEE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLG----QPQLENALTGMDLVII   94 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-~~g~~~dL~~~~~~~~v~~~~~----t~dl~~al~~ADiVii   94 (369)
                      .++|.|+||+|++|++++..|+..+.  +|++++.+. ......++.......++..+.+    ..++.++++++|+||.
T Consensus         9 ~~~vlItG~~GfIG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih   86 (338)
T PLN00198          9 KKTACVIGGTGFLASLLIKLLLQKGY--AVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFH   86 (338)
T ss_pred             CCeEEEECCchHHHHHHHHHHHHCCC--EEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEEE
Confidence            57999999999999999999999887  887776654 2221111211111122332221    2235677889999999


Q ss_pred             cCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           95 PAGVPRKPGMT-RDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        95 ~ag~p~k~g~~-r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      .|+.......+ ..+++..|+.....+.+.+.+...-..++++|
T Consensus        87 ~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~S  130 (338)
T PLN00198         87 VATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTS  130 (338)
T ss_pred             eCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEee
Confidence            98743211122 23466889999999999988764223444443

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=97.99  E-value=0.00011  Score=74.36  Aligned_cols=119  Identities=24%  Similarity=0.318  Sum_probs=75.6

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhccc----------------CCCeEEEEeCCCChhh
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD----------------TGAVVRGFLGQPQLEN   84 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~----------------~~~~v~~~~~t~dl~~   84 (369)
                      |||+|||. |.+|.+++..|+..++  +|++||++..+.  .+|....                ...+++.   ++++.+
T Consensus         1 mkI~vIGl-G~~G~~lA~~La~~G~--~V~~~d~~~~~v--~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~---~~~~~~   72 (411)
T TIGR03026         1 MKIAVIGL-GYVGLPLAALLADLGH--EVTGVDIDQEKV--DKLNKGKSPIYEPGLDELLAKALAAGRLRA---TTDYED   72 (411)
T ss_pred             CEEEEECC-CchhHHHHHHHHhcCC--eEEEEECCHHHH--HHhhcCCCCCCCCCHHHHHHHhhhcCCeEE---ECCHHH
Confidence            58999999 9999999999999988  899999986221  1122110                0122443   356778


Q ss_pred             hcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEe-cCCCCChhHHHHHHHHH
Q 017551           85 ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLI-SNPVNSTVPIAAEVFKK  153 (369)
Q Consensus        85 al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~-tNPv~~~t~i~ae~~~~  153 (369)
                      ++++||+||++.+.|.....      .-+...+.+..+.+.++. ++.++++. |-|.+....+...++.+
T Consensus        73 ~~~~advvii~vpt~~~~~~------~~d~~~v~~~~~~i~~~l~~g~lvi~~STv~pgt~~~l~~~~~~~  137 (411)
T TIGR03026        73 AIRDADVIIICVPTPLKEDG------SPDLSYVESAAETIAKHLRKGATVVLESTVPPGTTEEVVKPILER  137 (411)
T ss_pred             HHhhCCEEEEEeCCCCCCCC------CcChHHHHHHHHHHHHhcCCCCEEEEeCcCCCCchHHHHHHHHHh
Confidence            89999999999877754321      112344445555555554 45555544 46666665555444444

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=97.98  E-value=0.00014  Score=70.04  Aligned_cols=115  Identities=17%  Similarity=0.109  Sum_probs=74.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch-hHHHHhhccc-CCCeEEEEe----CCCChhhhcCCCcEEE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMD-TGAVVRGFL----GQPQLENALTGMDLVI   93 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~-g~~~dL~~~~-~~~~v~~~~----~t~dl~~al~~ADiVi   93 (369)
                      .+||.|+||+|++|++++..|..++.  +|++++.+... .....+.... ...++..+.    ...++.++++++|+||
T Consensus         4 ~~~ilVtGatGfIG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   81 (322)
T PLN02662          4 GKVVCVTGASGYIASWLVKLLLQRGY--TVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVF   81 (322)
T ss_pred             CCEEEEECChHHHHHHHHHHHHHCCC--EEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEE
Confidence            46999999999999999999999988  88888876521 1112222111 012333221    1234667889999999


Q ss_pred             EcCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEec
Q 017551           94 IPAGVPRKP-GMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLIS  137 (369)
Q Consensus        94 i~ag~p~k~-g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~t  137 (369)
                      ..|+..... .....+.+..|+.....+.+.+.+. ... .++++|
T Consensus        82 h~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~-~~v~~S  126 (322)
T PLN02662         82 HTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVK-RVVVTS  126 (322)
T ss_pred             EeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCC-EEEEcc
Confidence            998754221 1222366788999999999988776 333 344443

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=97.92  E-value=0.00014  Score=75.02  Aligned_cols=126  Identities=19%  Similarity=0.236  Sum_probs=92.7

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeC----CCChhhhcCC--C
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG----QPQLENALTG--M   89 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~----t~dl~~al~~--A   89 (369)
                      -+.+.|.|+||+|++|+.++..++..++ ++|+++|.++  ......+|.+.....++..+.+    ...++.++++  .
T Consensus       248 ~~gK~vLVTGagGSiGsel~~qil~~~p-~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kv  326 (588)
T COG1086         248 LTGKTVLVTGGGGSIGSELCRQILKFNP-KEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKV  326 (588)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHhcCC-CEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCC
Confidence            3457999999999999999998887743 5999999998  3444455554321234444332    1235678888  9


Q ss_pred             cEEEEcCCCCCCCCC--CHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec----CCCCChh
Q 017551           90 DLVIIPAGVPRKPGM--TRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS----NPVNSTV  144 (369)
Q Consensus        90 DiVii~ag~p~k~g~--~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t----NPv~~~t  144 (369)
                      |+|+.+|..-.-|=+  ...+-...|+--.++++++..++.=+.++.+-|    ||.|+|-
T Consensus       327 d~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV~PtNvmG  387 (588)
T COG1086         327 DIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAVNPTNVMG  387 (588)
T ss_pred             ceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcccCCchHhh
Confidence            999999986555543  456778999999999999999988777777765    7887763

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=97.91  E-value=0.00015  Score=71.34  Aligned_cols=116  Identities=16%  Similarity=0.044  Sum_probs=75.9

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhh-ccc--CCCeEEEEeC----CCChhhhcCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADIS-HMD--TGAVVRGFLG----QPQLENALTGM   89 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~-~~~--~~~~v~~~~~----t~dl~~al~~A   89 (369)
                      +.+||.|+||+|++|++++..|+..+.  +|+.+|....  .....++. ...  ...++..+.+    ..++.+.++++
T Consensus        14 ~~~~vlVtGatGfiG~~lv~~L~~~g~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~   91 (348)
T PRK15181         14 APKRWLITGVAGFIGSGLLEELLFLNQ--TVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNV   91 (348)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHHCCC--EEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCC
Confidence            347999999999999999999998887  9999997541  11111111 000  0123333321    12344567999


Q ss_pred             cEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           90 DLVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        90 DiVii~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      |+||..|+.+..+  .+........|+....++.+.+++...+- ++++|
T Consensus        92 d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~-~v~~S  140 (348)
T PRK15181         92 DYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSS-FTYAA  140 (348)
T ss_pred             CEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCe-EEEee
Confidence            9999998864422  23445678899999999999998875443 44443

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=97.89  E-value=0.00014  Score=73.04  Aligned_cols=113  Identities=19%  Similarity=0.247  Sum_probs=69.0

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhccc--------------CCCeEEEEeCCCChhhhc
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD--------------TGAVVRGFLGQPQLENAL   86 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~--------------~~~~v~~~~~t~dl~~al   86 (369)
                      |||+|||+ |.||.+++..++. ++  +|+.||+++.+  +..+....              ...+++.   +++..++.
T Consensus         1 mkI~VIGl-GyvGl~~A~~lA~-G~--~VigvD~d~~k--v~~l~~g~~~~~e~~l~~~l~~~~~~l~~---t~~~~~~~   71 (388)
T PRK15057          1 MKITISGT-GYVGLSNGLLIAQ-NH--EVVALDILPSR--VAMLNDRISPIVDKEIQQFLQSDKIHFNA---TLDKNEAY   71 (388)
T ss_pred             CEEEEECC-CHHHHHHHHHHHh-CC--cEEEEECCHHH--HHHHHcCCCCCCCcCHHHHHHhCCCcEEE---ecchhhhh
Confidence            69999999 9999999987775 66  99999998721  11111100              1122322   45566788


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe-cCCCCChhHHH
Q 017551           87 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI-SNPVNSTVPIA  147 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~-tNPv~~~t~i~  147 (369)
                      ++||+||++.+.|.......     -++..+.++++.+.+..|+.++++- |-|.+..-.+.
T Consensus        72 ~~ad~vii~Vpt~~~~k~~~-----~dl~~v~~v~~~i~~~~~g~lVV~~STv~pgtt~~l~  128 (388)
T PRK15057         72 RDADYVIIATPTDYDPKTNY-----FNTSSVESVIKDVVEINPYAVMVIKSTVPVGFTAAMH  128 (388)
T ss_pred             cCCCEEEEeCCCCCccCCCC-----cChHHHHHHHHHHHhcCCCCEEEEeeecCCchHHHHH
Confidence            99999999976663221111     1233444444555544455555444 67877765554

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=97.83  E-value=0.00017  Score=70.35  Aligned_cols=113  Identities=17%  Similarity=0.227  Sum_probs=76.4

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchh--HHHHhhcccCCCeEEEEe----CCCChhhhcCCCcEEE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTGAVVRGFL----GQPQLENALTGMDLVI   93 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g--~~~dL~~~~~~~~v~~~~----~t~dl~~al~~ADiVi   93 (369)
                      .++|.|+||+|++|++++..|+..+...+|+++|.+....  ...++..    ..+..+.    ...++.+++++.|+||
T Consensus         4 ~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~----~~~~~v~~Dl~d~~~l~~~~~~iD~Vi   79 (324)
T TIGR03589         4 NKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPA----PCLRFFIGDVRDKERLTRALRGVDYVV   79 (324)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCC----CcEEEEEccCCCHHHHHHHHhcCCEEE
Confidence            4689999999999999999998876334899999765221  1112211    2232221    1234566788999999


Q ss_pred             EcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           94 IPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        94 i~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      .+||....+  ..+..+.+..|+.....+.+.+.+.... .++++|
T Consensus        80 h~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~-~iV~~S  124 (324)
T TIGR03589        80 HAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVK-RVVALS  124 (324)
T ss_pred             ECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEe
Confidence            999864322  2345677889999999999999876543 455554

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=97.83  E-value=0.0002  Score=65.57  Aligned_cols=96  Identities=21%  Similarity=0.315  Sum_probs=64.4

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP   99 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p   99 (369)
                      +|+++|+|+ |++|+.++..+...++  ||..-..+..+.....-...  .+.++..    +.++|.+.||+||.+.  |
T Consensus         1 m~~~~i~Gt-GniG~alA~~~a~ag~--eV~igs~r~~~~~~a~a~~l--~~~i~~~----~~~dA~~~aDVVvLAV--P   69 (211)
T COG2085           1 MMIIAIIGT-GNIGSALALRLAKAGH--EVIIGSSRGPKALAAAAAAL--GPLITGG----SNEDAAALADVVVLAV--P   69 (211)
T ss_pred             CcEEEEecc-ChHHHHHHHHHHhCCC--eEEEecCCChhHHHHHHHhh--ccccccC----ChHHHHhcCCEEEEec--c
Confidence            468999998 9999999999999998  88887666533322211111  2344432    3468999999999994  4


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 017551          100 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  140 (369)
Q Consensus       100 ~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv  140 (369)
                                +....    ++.+++...-.+-++|-.|||.
T Consensus        70 ----------~~a~~----~v~~~l~~~~~~KIvID~tnp~   96 (211)
T COG2085          70 ----------FEAIP----DVLAELRDALGGKIVIDATNPI   96 (211)
T ss_pred             ----------HHHHH----hHHHHHHHHhCCeEEEecCCCc
Confidence                      13333    4444444433467788899995

>PRK12439 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=97.77  E-value=0.00037  Score=68.82  Aligned_cols=119  Identities=16%  Similarity=0.180  Sum_probs=74.8

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcc----cC-------CCeEEEEeCCCChhhh
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM----DT-------GAVVRGFLGQPQLENA   85 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~----~~-------~~~v~~~~~t~dl~~a   85 (369)
                      .++.|||+|+|+ |.+|+.++..|..++   ++++|..++..  ..++...    ..       ..++..   ++|+.++
T Consensus         4 ~~~~mkI~IiGa-Ga~G~alA~~La~~g---~v~l~~~~~~~--~~~i~~~~~~~~~l~~~~~l~~~i~~---t~d~~~a   74 (341)
T PRK12439          4 AKREPKVVVLGG-GSWGTTVASICARRG---PTLQWVRSAET--ADDINDNHRNSRYLGNDVVLSDTLRA---TTDFAEA   74 (341)
T ss_pred             ccCCCeEEEECC-CHHHHHHHHHHHHCC---CEEEEeCCHHH--HHHHHhcCCCcccCCCCcccCCCeEE---ECCHHHH
Confidence            456789999999 999999999999887   46788765422  2222211    11       112332   4677788


Q ss_pred             cCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCh-hHHHHHHHHHhCCCCCCcE
Q 017551           86 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNST-VPIAAEVFKKAGTYDPKKL  162 (369)
Q Consensus        86 l~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~-t~i~ae~~~~~~~~~~~kv  162 (369)
                      ++++|+||++.  |              ...++++++++..+. ++..++.++|-.+.- ...+++++.+.  +|..++
T Consensus        75 ~~~aDlVilav--p--------------s~~~~~vl~~i~~~l~~~~~vIsl~kGi~~~t~~~~se~i~~~--l~~~~~  135 (341)
T PRK12439         75 ANCADVVVMGV--P--------------SHGFRGVLTELAKELRPWVPVVSLVKGLEQGTNMRMSQIIEEV--LPGHPA  135 (341)
T ss_pred             HhcCCEEEEEe--C--------------HHHHHHHHHHHHhhcCCCCEEEEEEeCCcCCCCCcHHHHHHHH--cCCCCe
Confidence            99999999984  2              234556666666553 566788888877641 12223445553  344444

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=97.76  E-value=0.00019  Score=69.91  Aligned_cols=117  Identities=15%  Similarity=0.106  Sum_probs=80.4

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chh--HHHHhhcccCCCeEEEEe----CCCChhhhcCCCc
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPG--VTADISHMDTGAVVRGFL----GQPQLENALTGMD   90 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g--~~~dL~~~~~~~~v~~~~----~t~dl~~al~~AD   90 (369)
                      ..++|+|+||+|+||+.++..|+++|+  +|+--=++.  .+.  +..+|....  .+++.+.    ..+.+.+|+++||
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY--~V~gtVR~~~~~k~~~~L~~l~~a~--~~l~l~~aDL~d~~sf~~ai~gcd   80 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGY--TVRGTVRDPEDEKKTEHLRKLEGAK--ERLKLFKADLLDEGSFDKAIDGCD   80 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCC--EEEEEEcCcchhhhHHHHHhcccCc--ccceEEeccccccchHHHHHhCCC
Confidence            457999999999999999999999998  555443333  222  344555332  2233321    2456889999999


Q ss_pred             EEEEcCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 017551           91 LVIIPAGVPRKPGM-TRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  140 (369)
Q Consensus        91 iVii~ag~p~k~g~-~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv  140 (369)
                      .|+.+|...--... .-.+++.-.++....+.+.+.++. .-.=+++|.-.
T Consensus        81 gVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~-sVkrvV~TSS~  130 (327)
T KOG1502|consen   81 GVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTK-SVKRVVYTSST  130 (327)
T ss_pred             EEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccC-CcceEEEeccH
Confidence            99999864322122 244688889999999999999886 44445566544

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=97.76  E-value=0.00029  Score=75.54  Aligned_cols=113  Identities=14%  Similarity=0.078  Sum_probs=76.1

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhC-CCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC-CCC----hhhhcCCCc
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QPQ----LENALTGMD   90 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~-~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~-t~d----l~~al~~AD   90 (369)
                      +.+.+||.|+||+|++|++++..|... ++  +|+.+|.+....  .++..   ...+..+.+ -+|    +.++++++|
T Consensus       312 ~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~--~V~~l~r~~~~~--~~~~~---~~~~~~~~gDl~d~~~~l~~~l~~~D  384 (660)
T PRK08125        312 AKRRTRVLILGVNGFIGNHLTERLLRDDNY--EVYGLDIGSDAI--SRFLG---HPRFHFVEGDISIHSEWIEYHIKKCD  384 (660)
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHhCCCc--EEEEEeCCchhh--hhhcC---CCceEEEeccccCcHHHHHHHhcCCC
Confidence            467789999999999999999999874 56  999999865211  11111   112332211 111    345789999


Q ss_pred             EEEEcCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 017551           91 LVIIPAGVPR--KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        91 iVii~ag~p~--k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      +||..|+...  .......++...|+....++.+++.++. . .++++|.
T Consensus       385 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~-~~V~~SS  432 (660)
T PRK08125        385 VVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-K-RIIFPST  432 (660)
T ss_pred             EEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-C-eEEEEcc
Confidence            9999987543  2223456677889999999999999875 3 4554543

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=97.76  E-value=0.00076  Score=65.32  Aligned_cols=117  Identities=17%  Similarity=0.118  Sum_probs=74.1

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch-hHHHHhhcc-cCCCeEEEEe----CCCChhhhcCCCcEE
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHM-DTGAVVRGFL----GQPQLENALTGMDLV   92 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~-g~~~dL~~~-~~~~~v~~~~----~t~dl~~al~~ADiV   92 (369)
                      ..++|.|+||+|+||++++..|+..+.  +|++.+.+... .....+... ....++..+.    ...++.++++++|+|
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   81 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGY--TINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETV   81 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCC--EEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEE
Confidence            357999999999999999999999987  88887766521 111111111 1112233221    123456778899999


Q ss_pred             EEcCCCCCCC-C-CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           93 IIPAGVPRKP-G-MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        93 ii~ag~p~k~-g-~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      |.+||..... . ......+..|+.....+.+.+.++.....++++|
T Consensus        82 ih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~S  128 (325)
T PLN02989         82 FHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTS  128 (325)
T ss_pred             EEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEec
Confidence            9999854221 1 1234567889999999999887764223455544

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=97.75  E-value=8.6e-05  Score=59.10  Aligned_cols=94  Identities=21%  Similarity=0.249  Sum_probs=61.1

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCC-CCcEEEEE-eCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCC
Q 017551           22 KVAILGAAGGIGQPLAMLMKINP-LVSVLHLY-DVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP   99 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~-~~~el~L~-D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p   99 (369)
                      ||+|||+ |.+|++++..+...+ ...+|.++ +.+..+  ..++.... .  +..+  +.+..+++++||+||++.  |
T Consensus         1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~--~~~~~~~~-~--~~~~--~~~~~~~~~~advvilav--~   70 (96)
T PF03807_consen    1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSPEK--AAELAKEY-G--VQAT--ADDNEEAAQEADVVILAV--K   70 (96)
T ss_dssp             EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSHHH--HHHHHHHC-T--TEEE--SEEHHHHHHHTSEEEE-S---
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcHHH--HHHHHHhh-c--cccc--cCChHHhhccCCEEEEEE--C
Confidence            7999999 999999999999887 23488866 876521  22222211 1  2221  224578999999999985  1


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC
Q 017551          100 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP  139 (369)
Q Consensus       100 ~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP  139 (369)
                        |            ..+.++++.+....++.++|-++||
T Consensus        71 --p------------~~~~~v~~~i~~~~~~~~vis~~ag   96 (96)
T PF03807_consen   71 --P------------QQLPEVLSEIPHLLKGKLVISIAAG   96 (96)
T ss_dssp             --G------------GGHHHHHHHHHHHHTTSEEEEESTT
T ss_pred             --H------------HHHHHHHHHHhhccCCCEEEEeCCC
Confidence              1            2245666666445578888877776

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=97.73  E-value=0.00025  Score=69.53  Aligned_cols=109  Identities=17%  Similarity=0.147  Sum_probs=70.6

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhC-CCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCC-----CChhhhcCCCcEEEE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ-----PQLENALTGMDLVII   94 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~-~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t-----~dl~~al~~ADiVii   94 (369)
                      |||.|+||+|++|+.++..|+.. +.  +|+.+|.....  ..++..   ...+..+.+.     ..+.++++++|+||.
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~--~V~~~~r~~~~--~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH   74 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDW--EVYGMDMQTDR--LGDLVN---HPRMHFFEGDITINKEWIEYHVKKCDVILP   74 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCC--eEEEEeCcHHH--HHHhcc---CCCeEEEeCCCCCCHHHHHHHHcCCCEEEE
Confidence            68999999999999999999875 55  89999975311  111211   1223332211     123356789999999


Q ss_pred             cCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 017551           95 PAGVPR--KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        95 ~ag~p~--k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      +|+...  ............|+.....+++.+.+..  ..++.+|.
T Consensus        75 ~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~--~~~v~~SS  118 (347)
T PRK11908         75 LVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPST  118 (347)
T ss_pred             CcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC--CeEEEEec
Confidence            887532  2233445556778888888998888754  35555543

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=97.73  E-value=0.00055  Score=65.72  Aligned_cols=120  Identities=21%  Similarity=0.240  Sum_probs=71.4

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccC---CCeEEE-EeCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT---GAVVRG-FLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~---~~~v~~-~~~t~dl~~al~~ADiVii~a   96 (369)
                      |||+|+|+ |.+|+.++..|.+.+.  +|.++|.+.....  .+.....   ...... ...+++..+ ++++|+||++.
T Consensus         1 m~I~IiG~-G~~G~~~a~~L~~~g~--~V~~~~r~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~d~vila~   74 (304)
T PRK06522          1 MKIAILGA-GAIGGLFGAALAQAGH--DVTLVARRGAHLD--ALNENGLRLEDGEITVPVLAADDPAE-LGPQDLVILAV   74 (304)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC--eEEEEECChHHHH--HHHHcCCcccCCceeecccCCCChhH-cCCCCEEEEec
Confidence            68999999 9999999999998887  9999998641111  1111000   011111 011345544 49999999985


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEE-Eechhc
Q 017551           97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLL-GVTMLD  169 (369)
Q Consensus        97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kvi-G~t~Ld  169 (369)
                      ...                -..++++.+..+ .++..|+...|.++....+     .+.  +++.+++ |++...
T Consensus        75 k~~----------------~~~~~~~~l~~~l~~~~~iv~~~nG~~~~~~l-----~~~--~~~~~i~~~~~~~~  126 (304)
T PRK06522         75 KAY----------------QLPAALPSLAPLLGPDTPVLFLQNGVGHLEEL-----AAY--IGPERVLGGVVTHA  126 (304)
T ss_pred             ccc----------------cHHHHHHHHhhhcCCCCEEEEecCCCCcHHHH-----HHh--cCcccEEEEEEEEe
Confidence            211                123444455544 3667888889988765432     232  4555665 445443

>CHL00194 ycf39 Ycf39; Provisional

Probab=97.72  E-value=0.00014  Score=70.57  Aligned_cols=108  Identities=12%  Similarity=0.059  Sum_probs=70.4

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEE-eCCCChhhhcCCCcEEEEcCCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQLENALTGMDLVIIPAGVP   99 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~-~~t~dl~~al~~ADiVii~ag~p   99 (369)
                      |||.|+||+|++|+.++..|...++  +|+.++.+....  ..+.+... .-+... ....++.++++++|+||.+++..
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~--~V~~l~R~~~~~--~~l~~~~v-~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~   75 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGY--QVRCLVRNLRKA--SFLKEWGA-ELVYGDLSLPETLPPSFKGVTAIIDASTSR   75 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC--eEEEEEcChHHh--hhHhhcCC-EEEECCCCCHHHHHHHHCCCCEEEECCCCC
Confidence            6999999999999999999999887  899998764221  11111110 111111 11245678899999999986532


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551          100 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus       100 ~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ..   ...++...|......+++++++..-+- ++.+|
T Consensus        76 ~~---~~~~~~~~~~~~~~~l~~aa~~~gvkr-~I~~S  109 (317)
T CHL00194         76 PS---DLYNAKQIDWDGKLALIEAAKAAKIKR-FIFFS  109 (317)
T ss_pred             CC---CccchhhhhHHHHHHHHHHHHHcCCCE-EEEec
Confidence            11   122345667788888888888876553 44444

>PLN02214 cinnamoyl-CoA reductase

Probab=97.72  E-value=0.00064  Score=66.87  Aligned_cols=111  Identities=14%  Similarity=0.053  Sum_probs=75.1

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--h-HHHHhhcccCCCeEEEEe----CCCChhhhcCCCcE
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--G-VTADISHMDTGAVVRGFL----GQPQLENALTGMDL   91 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g-~~~dL~~~~~~~~v~~~~----~t~dl~~al~~ADi   91 (369)
                      +.++|.|+||+|++|++++..|+.++.  +|+.++.+...  . ....+...  ..++..+.    ...++.++++++|+
T Consensus         9 ~~~~vlVTGatGfIG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~d~   84 (342)
T PLN02214          9 AGKTVCVTGAGGYIASWIVKILLERGY--TVKGTVRNPDDPKNTHLRELEGG--KERLILCKADLQDYEALKAAIDGCDG   84 (342)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcC--EEEEEeCCchhhhHHHHHHhhCC--CCcEEEEecCcCChHHHHHHHhcCCE
Confidence            456899999999999999999999987  88888875421  1 11122111  11233221    12346678899999


Q ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           92 VIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        92 Vii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ||.+|+...   ....+.+..|+.....+.+.+.+...+- ++++|
T Consensus        85 Vih~A~~~~---~~~~~~~~~nv~gt~~ll~aa~~~~v~r-~V~~S  126 (342)
T PLN02214         85 VFHTASPVT---DDPEQMVEPAVNGAKFVINAAAEAKVKR-VVITS  126 (342)
T ss_pred             EEEecCCCC---CCHHHHHHHHHHHHHHHHHHHHhcCCCE-EEEec
Confidence            999997542   2345677889999999999988775443 44443

>PTZ00345 glycerol-3-phosphate dehydrogenase; Provisional

Probab=97.72  E-value=0.00031  Score=70.02  Aligned_cols=98  Identities=15%  Similarity=0.263  Sum_probs=66.1

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCC-----CcEEEEEeCCCc---hhHHHHhhc--cc--------CCCeEEEEeCCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPL-----VSVLHLYDVVNT---PGVTADISH--MD--------TGAVVRGFLGQPQ   81 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~-----~~el~L~D~~~~---~g~~~dL~~--~~--------~~~~v~~~~~t~d   81 (369)
                      ++||+|||+ |.-|+++|..|..++.     ..+|.||..++.   ...+.++.+  ..        .+.++..   ++|
T Consensus        11 ~~ki~ViGa-G~wGtAlA~~l~~n~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~N~~ylp~~~Lp~ni~~---tsd   86 (365)
T PTZ00345         11 PLKVSVIGS-GNWGSAISKVVGENTQRNYIFHNEVRMWVLEEIVEGEKLSDIINTKHENVKYLPGIKLPDNIVA---VSD   86 (365)
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhcCCcccCCCCeEEEEEecccccchHHHHHHHhcCCCcccCCCCcCCCceEE---ecC
Confidence            479999999 9999999999998862     238999988762   223444442  21        1234443   468


Q ss_pred             hhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhh--hC-CCeEEEEec
Q 017551           82 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAK--CC-PNATVNLIS  137 (369)
Q Consensus        82 l~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~--~~-p~a~viv~t  137 (369)
                      +.+++++||+||++.  |              ...++++++++..  +- +++++|.++
T Consensus        87 l~eav~~aDiIvlAV--P--------------sq~l~~vl~~l~~~~~l~~~~~iIS~a  129 (365)
T PTZ00345         87 LKEAVEDADLLIFVI--P--------------HQFLESVLSQIKENNNLKKHARAISLT  129 (365)
T ss_pred             HHHHHhcCCEEEEEc--C--------------hHHHHHHHHHhccccccCCCCEEEEEe
Confidence            888999999999873  3              2446677777775  33 344555443

>PRK12921 2-dehydropantoate 2-reductase; Provisional

Probab=97.70  E-value=0.00025  Score=68.28  Aligned_cols=123  Identities=11%  Similarity=0.130  Sum_probs=72.6

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHH--hhcccCCCeEEE-EeCCCChhhhcCCCcEEEEcCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTAD--ISHMDTGAVVRG-FLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~d--L~~~~~~~~v~~-~~~t~dl~~al~~ADiVii~ag   97 (369)
                      |||+|+|+ |.+|+.++..|...+.  +|.+++..+......+  +........... ....++.+++.+++|+||++..
T Consensus         1 mkI~IiG~-G~iG~~~a~~L~~~g~--~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vilavk   77 (305)
T PRK12921          1 MRIAVVGA-GAVGGTFGGRLLEAGR--DVTFLVRPKRAKALRERGLVIRSDHGDAVVPGPVITDPEELTGPFDLVILAVK   77 (305)
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCC--ceEEEecHHHHHHHHhCCeEEEeCCCeEEecceeecCHHHccCCCCEEEEEec
Confidence            69999999 9999999999999887  8999998221111111  100000011110 0012455555689999999852


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEE-Eechhc
Q 017551           98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLL-GVTMLD  169 (369)
Q Consensus        98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kvi-G~t~Ld  169 (369)
                      .+                -..++.+.+..+ .++..|+...|.++....     +.+.  +|.++++ |++...
T Consensus        78 ~~----------------~~~~~~~~l~~~~~~~~~ii~~~nG~~~~~~-----l~~~--~~~~~v~~g~~~~~  128 (305)
T PRK12921         78 AY----------------QLDAAIPDLKPLVGEDTVIIPLQNGIGQLEQ-----LEPY--FGRERVLGGVVFIS  128 (305)
T ss_pred             cc----------------CHHHHHHHHHhhcCCCCEEEEeeCCCChHHH-----HHHh--CCcccEEEEEEEEE
Confidence            21                133444555544 356778888898875432     2333  6667777 445444

>PLN02778 3,5-epimerase/4-reductase

Probab=97.68  E-value=0.00069  Score=65.45  Aligned_cols=92  Identities=23%  Similarity=0.197  Sum_probs=63.7

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhc--CCCcEEEE
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL--TGMDLVII   94 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al--~~ADiVii   94 (369)
                      +...|||.|+||+|++|++++..|..++.  ++++...+.        .+.            ..+..++  .++|+||.
T Consensus         6 ~~~~~kiLVtG~tGfiG~~l~~~L~~~g~--~V~~~~~~~--------~~~------------~~v~~~l~~~~~D~ViH   63 (298)
T PLN02778          6 GSATLKFLIYGKTGWIGGLLGKLCQEQGI--DFHYGSGRL--------ENR------------ASLEADIDAVKPTHVFN   63 (298)
T ss_pred             CCCCCeEEEECCCCHHHHHHHHHHHhCCC--EEEEecCcc--------CCH------------HHHHHHHHhcCCCEEEE
Confidence            44568999999999999999999998887  766432211        100            0011122  26899999


Q ss_pred             cCCCCCCCC-----CCHHHHHHHHHHHHHHHHHHHhhhCCC
Q 017551           95 PAGVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCCPN  130 (369)
Q Consensus        95 ~ag~p~k~g-----~~r~~~~~~N~~i~~~i~~~i~~~~p~  130 (369)
                      +|+....+.     ....+.+..|+.....+++.+++....
T Consensus        64 ~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~  104 (298)
T PLN02778         64 AAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLV  104 (298)
T ss_pred             CCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            998643222     235677889999999999999887543

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=97.68  E-value=0.00035  Score=67.22  Aligned_cols=111  Identities=18%  Similarity=0.199  Sum_probs=73.7

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEE-eCCCChhhhcCCCcEEEEcCCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQLENALTGMDLVIIPAGVP   99 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~-~~t~dl~~al~~ADiVii~ag~p   99 (369)
                      |||.|+||+|++|+.++..|...+.  +|+++|.+....  .++.+... ..+... ....++.++++++|+||..++..
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~--~~~~~~~~-~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~   75 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGE--EVRVLVRPTSDR--RNLEGLDV-EIVEGDLRDPASLRKAVAGCRALFHVAADY   75 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCC--EEEEEEecCccc--cccccCCc-eEEEeeCCCHHHHHHHHhCCCEEEEeceec
Confidence            5899999999999999999999887  899999865221  11111110 111111 11234567788999999988653


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551          100 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus       100 ~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      .............|+.....+++.+.+..-. .+++.|
T Consensus        76 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S  112 (328)
T TIGR03466        76 RLWAPDPEEMYAANVEGTRNLLRAALEAGVE-RVVYTS  112 (328)
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHHHHHhCCC-eEEEEe
Confidence            2223445667788999999999988876533 344444

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=97.68  E-value=0.00036  Score=66.55  Aligned_cols=113  Identities=18%  Similarity=0.105  Sum_probs=72.6

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc---hhHHHHhhcccCCCeEEEEe----CCCChhhhcCC--CcEE
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL----GQPQLENALTG--MDLV   92 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~---~g~~~dL~~~~~~~~v~~~~----~t~dl~~al~~--ADiV   92 (369)
                      ||.|+||+|++|+.++..|+..+...+|+++|....   .....++..   ...+..+.    ...++.+++++  +|+|
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~d~v   77 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED---NPRYRFVKGDIGDRELVSRLFTEHQPDAV   77 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc---CCCcEEEEcCCcCHHHHHHHHhhcCCCEE
Confidence            589999999999999998887763348888886431   111122221   11222221    12345566776  8999


Q ss_pred             EEcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           93 IIPAGVPRK--PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        93 ii~ag~p~k--~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      |..|+....  .......++..|+.....+++.+.+...+..++.+|
T Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~S  124 (317)
T TIGR01181        78 VHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHIS  124 (317)
T ss_pred             EEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEee
Confidence            999875321  122344567889999999999988775555566554

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=97.66  E-value=0.00062  Score=66.89  Aligned_cols=117  Identities=17%  Similarity=0.069  Sum_probs=73.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHhhcccCCCeEEEE-eCCCChhhhcCC--CcEEEE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGF-LGQPQLENALTG--MDLVII   94 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~~~~~~v~~~-~~t~dl~~al~~--ADiVii   94 (369)
                      .++|.|+||+|++|++++..|++.+.  +|+.+|.+...  .....+........+... ....++.+.+++  .|+||.
T Consensus         4 ~k~ilItGatG~IG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih   81 (349)
T TIGR02622         4 GKKVLVTGHTGFKGSWLSLWLLELGA--EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFH   81 (349)
T ss_pred             CCEEEEECCCChhHHHHHHHHHHCCC--EEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEE
Confidence            47999999999999999999999887  89999976621  111112110000011111 111234455554  599999


Q ss_pred             cCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 017551           95 PAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        95 ~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      +|+.+...  .......+..|+.....+.+.+.+.+....++++|.
T Consensus        82 ~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS  127 (349)
T TIGR02622        82 LAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTS  127 (349)
T ss_pred             CCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEec
Confidence            98854321  123456678899999999999876653335666554

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=97.66  E-value=0.00035  Score=67.94  Aligned_cols=80  Identities=23%  Similarity=0.286  Sum_probs=60.6

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      ..|||+|||+ |.+|++++..|...++  +|.+||.+..                      .++.+++++||+||++.  
T Consensus         3 ~~m~I~iiG~-G~~G~~lA~~l~~~G~--~V~~~~r~~~----------------------~~~~~~~~~advvi~~v--   55 (308)
T PRK14619          3 QPKTIAILGA-GAWGSTLAGLASANGH--RVRVWSRRSG----------------------LSLAAVLADADVIVSAV--   55 (308)
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHHCCC--EEEEEeCCCC----------------------CCHHHHHhcCCEEEEEC--
Confidence            3579999999 9999999999999998  9999998641                      24567889999999984  


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhh--CCCeEEEEecCC
Q 017551           99 PRKPGMTRDDLFNINAGIVRTLCEGIAKC--CPNATVNLISNP  139 (369)
Q Consensus        99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~--~p~a~viv~tNP  139 (369)
                      |              ...++++++.+..+  .++.+++..|+.
T Consensus        56 p--------------~~~~~~v~~~l~~~~~~~~~ivi~~s~g   84 (308)
T PRK14619         56 S--------------MKGVRPVAEQVQALNLPPETIIVTATKG   84 (308)
T ss_pred             C--------------hHHHHHHHHHHHHhcCCCCcEEEEeCCc
Confidence            2              12344555666543  467777777773

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=97.65  E-value=0.00044  Score=67.12  Aligned_cols=100  Identities=22%  Similarity=0.355  Sum_probs=64.7

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHhhccc------CCCeEEEEeCCCChhhhcCCCcEE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMD------TGAVVRGFLGQPQLENALTGMDLV   92 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~~------~~~~v~~~~~t~dl~~al~~ADiV   92 (369)
                      |||+|||+ |.+|+.++..|+..+.  ++.+||.+...  ....+..+..      ....+..   ++++.++++++|+|
T Consensus         2 mkI~iiG~-G~mG~~~a~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~D~v   75 (325)
T PRK00094          2 MKIAVLGA-GSWGTALAIVLARNGH--DVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRA---TTDLAEALADADLI   75 (325)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEE---eCCHHHHHhCCCEE
Confidence            69999999 9999999999999887  89999997522  1111110100      0112332   34666788999999


Q ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCC
Q 017551           93 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNS  142 (369)
Q Consensus        93 ii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~  142 (369)
                      |++...                ..+.++.+.+..+. |+.+++..+|-++.
T Consensus        76 i~~v~~----------------~~~~~v~~~l~~~~~~~~~vi~~~ngv~~  110 (325)
T PRK00094         76 LVAVPS----------------QALREVLKQLKPLLPPDAPIVWATKGIEP  110 (325)
T ss_pred             EEeCCH----------------HHHHHHHHHHHhhcCCCCEEEEEeecccC
Confidence            998410                12345555566554 67777878775543

>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=97.64  E-value=0.0004  Score=67.92  Aligned_cols=117  Identities=17%  Similarity=0.378  Sum_probs=72.1

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhc----cc------CCCeEEEEeCCCChhhhc-CCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISH----MD------TGAVVRGFLGQPQLENAL-TGM   89 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~----~~------~~~~v~~~~~t~dl~~al-~~A   89 (369)
                      |||+|||| |.+|+.++..|..++.  +|.||+.++..  +..+..    ..      ....++.   ++|+.+++ .++
T Consensus         1 MkI~IiGa-Ga~G~ala~~L~~~g~--~V~l~~r~~~~--~~~i~~~~~~~~~~~~~~~~~~i~~---~~~~~~~~~~~~   72 (326)
T PRK14620          1 MKISILGA-GSFGTAIAIALSSKKI--SVNLWGRNHTT--FESINTKRKNLKYLPTCHLPDNISV---KSAIDEVLSDNA   72 (326)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCC--eEEEEecCHHH--HHHHHHcCCCcccCCCCcCCCCeEE---eCCHHHHHhCCC
Confidence            68999999 9999999999999987  89999997521  112221    10      1123333   35666776 589


Q ss_pred             cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhh-h-CCCeEEEEecCCCCChh-HHHHHHHHHhCCCCCCcEE
Q 017551           90 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAK-C-CPNATVNLISNPVNSTV-PIAAEVFKKAGTYDPKKLL  163 (369)
Q Consensus        90 DiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~-~-~p~a~viv~tNPv~~~t-~i~ae~~~~~~~~~~~kvi  163 (369)
                      |+||++.  |              ..-+.++++.+.. + .++..++..+|=.+.-+ .+..+.+.+.  +|..++.
T Consensus        73 Dliiiav--k--------------s~~~~~~l~~l~~~~l~~~~~vv~~~nGi~~~~~~~~~~~l~~~--~~~~~~~  131 (326)
T PRK14620         73 TCIILAV--P--------------TQQLRTICQQLQDCHLKKNTPILICSKGIEKSSLKFPSEIVNEI--LPNNPIA  131 (326)
T ss_pred             CEEEEEe--C--------------HHHHHHHHHHHHHhcCCCCCEEEEEEcCeeCCCCccHHHHHHHH--cCCCceE
Confidence            9999984  1              2234455555554 3 36777777888764310 1123445554  4555554

>TIGR03376 glycerol3P_DH glycerol-3-phosphate dehydrogenase (NAD(+))

Probab=97.63  E-value=0.00044  Score=68.40  Aligned_cols=96  Identities=22%  Similarity=0.385  Sum_probs=62.8

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCC------CCcEEEEEeCCC---chhHHHHhh--ccc--C------CCeEEEEeCCCCh
Q 017551           22 KVAILGAAGGIGQPLAMLMKINP------LVSVLHLYDVVN---TPGVTADIS--HMD--T------GAVVRGFLGQPQL   82 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~------~~~el~L~D~~~---~~g~~~dL~--~~~--~------~~~v~~~~~t~dl   82 (369)
                      ||+|||| |..|+++|..|..++      ...+|.||..++   -......+.  |..  .      +.+++.   ++|+
T Consensus         1 kI~VIGa-G~wGtALA~~la~ng~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~n~~ylpgi~Lp~~i~a---t~dl   76 (342)
T TIGR03376         1 RVAVVGS-GNWGTAIAKIVAENARALPELFEESVRMWVFEEEIEGRNLTEIINTTHENVKYLPGIKLPANLVA---VPDL   76 (342)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCcccccCCceEEEEEeccccCCHHHHHHHHhcCCCccccCCCcCCCCeEE---ECCH
Confidence            7999999 999999999999877      124999999843   122222232  221  1      223443   4688


Q ss_pred             hhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEec
Q 017551           83 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS  137 (369)
Q Consensus        83 ~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t  137 (369)
                      ++++++||+||++.  |              ...++++++++..+- ++..++.+|
T Consensus        77 ~eal~~ADiIIlAV--P--------------s~~i~~vl~~l~~~l~~~~~iVs~t  116 (342)
T TIGR03376        77 VEAAKGADILVFVI--P--------------HQFLEGICKQLKGHVKPNARAISCI  116 (342)
T ss_pred             HHHHhcCCEEEEEC--C--------------hHHHHHHHHHHHhhcCCCCEEEEEe
Confidence            89999999999983  3              244556666666553 344555554

Members of this protein family are the eukaryotic enzyme, glycerol-3-phosphate dehydrogenase (NAD(+)) (EC 1.1.1.8). Enzymatic activity for 1.1.1.8 is defined as sn-glycerol 3-phosphate + NAD(+) = glycerone phosphate + NADH. Note the very similar reactions of enzymes defined as EC 1.1.1.94 and 1.1.99.5, assigned to families of proteins in the bacteria.

>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional

Probab=97.63  E-value=0.00082  Score=68.40  Aligned_cols=120  Identities=14%  Similarity=0.148  Sum_probs=73.0

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccC------------CCeEEEEeCCCChhhh
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT------------GAVVRGFLGQPQLENA   85 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~------------~~~v~~~~~t~dl~~a   85 (369)
                      ..+|||+|||- |+||.++|..|+. ++  +|+.||+++.+  +..|.....            ...+..   +++. ++
T Consensus         4 ~~~mkI~vIGl-GyvGlpmA~~la~-~~--~V~g~D~~~~~--ve~l~~G~~~~~e~~~~~l~~~g~l~~---t~~~-~~   73 (425)
T PRK15182          4 IDEVKIAIIGL-GYVGLPLAVEFGK-SR--QVVGFDVNKKR--ILELKNGVDVNLETTEEELREARYLKF---TSEI-EK   73 (425)
T ss_pred             CCCCeEEEECc-CcchHHHHHHHhc-CC--EEEEEeCCHHH--HHHHHCcCCCCCCCCHHHHHhhCCeeE---EeCH-HH
Confidence            45689999999 9999999999877 45  99999998722  222331110            112232   3454 57


Q ss_pred             cCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEe-cCCCCChhHHHHHHHHH
Q 017551           86 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLI-SNPVNSTVPIAAEVFKK  153 (369)
Q Consensus        86 l~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~-tNPv~~~t~i~ae~~~~  153 (369)
                      +++||++|++.+.|.+....      ..+.-+....+.|.++. +..++|+- |-|.+....++...+.+
T Consensus        74 ~~~advvii~Vptp~~~~~~------~dl~~v~~a~~~i~~~l~~g~lVI~~STv~pgtt~~~~~~~l~~  137 (425)
T PRK15182         74 IKECNFYIITVPTPINTYKQ------PDLTPLIKASETVGTVLNRGDIVVYESTVYPGCTEEECVPILAR  137 (425)
T ss_pred             HcCCCEEEEEcCCCCCCCCC------cchHHHHHHHHHHHHhcCCCCEEEEecCCCCcchHHHHHHHHHh
Confidence            89999999998888643211      12233334444555554 34544443 67777665444444443

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=97.61  E-value=0.00026  Score=70.55  Aligned_cols=114  Identities=15%  Similarity=-0.008  Sum_probs=72.1

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeE-EEE-eCCCChhhhcCCCcEEEE
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVV-RGF-LGQPQLENALTGMDLVII   94 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v-~~~-~~t~dl~~al~~ADiVii   94 (369)
                      ....|||.|+||+|+||++++..|...++  +|+.+|..... ...+   ......+ ... ....++..+++++|+||.
T Consensus        18 ~~~~~~IlVtGgtGfIG~~l~~~L~~~G~--~V~~v~r~~~~-~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih   91 (370)
T PLN02695         18 PSEKLRICITGAGGFIASHIARRLKAEGH--YIIASDWKKNE-HMSE---DMFCHEFHLVDLRVMENCLKVTKGVDHVFN   91 (370)
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHhCCC--EEEEEEecccc-cccc---ccccceEEECCCCCHHHHHHHHhCCCEEEE
Confidence            45668999999999999999999999887  99999975311 0000   0000011 110 001224456789999999


Q ss_pred             cCCCCCCCC---CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           95 PAGVPRKPG---MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        95 ~ag~p~k~g---~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      +|+.....+   .........|+.....+++.+.+...+. ++++|
T Consensus        92 ~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~-~V~~S  136 (370)
T PLN02695         92 LAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKR-FFYAS  136 (370)
T ss_pred             cccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCE-EEEeC
Confidence            986431111   1223346789999999999988776554 44444

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=97.60  E-value=0.00083  Score=68.17  Aligned_cols=112  Identities=21%  Similarity=0.210  Sum_probs=69.6

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhccc--------------CCCeEEEEeCCCChhhh
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD--------------TGAVVRGFLGQPQLENA   85 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~--------------~~~~v~~~~~t~dl~~a   85 (369)
                      .+||+|||. |.||.++|..|+..|+  +|+.||+++.+-.........              ....+..   +++    
T Consensus         3 ~~kI~VIGl-G~~G~~~A~~La~~G~--~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~l~~~~~~g~l~~---~~~----   72 (415)
T PRK11064          3 FETISVIGL-GYIGLPTAAAFASRQK--QVIGVDINQHAVDTINRGEIHIVEPDLDMVVKTAVEGGYLRA---TTT----   72 (415)
T ss_pred             ccEEEEECc-chhhHHHHHHHHhCCC--EEEEEeCCHHHHHHHHCCCCCcCCCCHHHHHHHHhhcCceee---ecc----
Confidence            479999999 9999999999999997  999999987321111100000              0112222   222    


Q ss_pred             cCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEe-cCCCCChhHHH
Q 017551           86 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLI-SNPVNSTVPIA  147 (369)
Q Consensus        86 l~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~-tNPv~~~t~i~  147 (369)
                      +++||+||++...|.++..      ..++..+.+.++.+..+. ++.+||+- |.|.+..-.+.
T Consensus        73 ~~~aDvvii~vptp~~~~~------~~dl~~v~~~~~~i~~~l~~g~iVI~~STv~pgtt~~~~  130 (415)
T PRK11064         73 PEPADAFLIAVPTPFKGDH------EPDLTYVEAAAKSIAPVLKKGDLVILESTSPVGATEQMA  130 (415)
T ss_pred             cccCCEEEEEcCCCCCCCC------CcChHHHHHHHHHHHHhCCCCCEEEEeCCCCCCHHHHHH
Confidence            3589999999877754321      122344555556666665 45555554 56777765554

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=97.59  E-value=0.00094  Score=58.97  Aligned_cols=93  Identities=25%  Similarity=0.295  Sum_probs=66.2

Q ss_pred             EEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC-C---CChhhhcCCCcEEEEcCCC
Q 017551           23 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-Q---PQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        23 I~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~-t---~dl~~al~~ADiVii~ag~   98 (369)
                      |+|+||+|++|+.++..|...+.  +|+++-.+..+..  +      ...++.+.+ .   +++.++++++|.||.++|.
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~--~V~~~~R~~~~~~--~------~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~   70 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGH--EVTALVRSPSKAE--D------SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGP   70 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTS--EEEEEESSGGGHH--H------CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHS
T ss_pred             eEEECCCChHHHHHHHHHHHCCC--EEEEEecCchhcc--c------ccccccceeeehhhhhhhhhhhhcchhhhhhhh
Confidence            78999999999999999999996  9999988753211  1      233443322 1   2457889999999999866


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      +.+           ....++.+.+.+++.... .++++|
T Consensus        71 ~~~-----------~~~~~~~~~~a~~~~~~~-~~v~~s   97 (183)
T PF13460_consen   71 PPK-----------DVDAAKNIIEAAKKAGVK-RVVYLS   97 (183)
T ss_dssp             TTT-----------HHHHHHHHHHHHHHTTSS-EEEEEE
T ss_pred             hcc-----------cccccccccccccccccc-cceeee
Confidence            543           167778888888876544 344444

...

>PRK08229 2-dehydropantoate 2-reductase; Provisional

Probab=97.58  E-value=0.00084  Score=65.85  Aligned_cols=100  Identities=19%  Similarity=0.198  Sum_probs=62.5

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhh-cccC---------CCeEEEEeCCCChhhhcCCCc
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADIS-HMDT---------GAVVRGFLGQPQLENALTGMD   90 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~-~~~~---------~~~v~~~~~t~dl~~al~~AD   90 (369)
                      |||+|||+ |.+|+.++..|...+.  +|.++|.+.......... +...         ...+..   ++++ ++++++|
T Consensus         3 mkI~IiG~-G~mG~~~A~~L~~~G~--~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~D   75 (341)
T PRK08229          3 ARICVLGA-GSIGCYLGGRLAAAGA--DVTLIGRARIGDELRAHGLTLTDYRGRDVRVPPSAIAF---STDP-AALATAD   75 (341)
T ss_pred             ceEEEECC-CHHHHHHHHHHHhcCC--cEEEEecHHHHHHHHhcCceeecCCCcceecccceeEe---ccCh-hhccCCC
Confidence            69999999 9999999999999987  899999864111111000 0000         001221   3455 6789999


Q ss_pred             EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecCCCCCh
Q 017551           91 LVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNST  143 (369)
Q Consensus        91 iVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNPv~~~  143 (369)
                      +||++...+.                ..++++.+..+ .++.+++..+|..+..
T Consensus        76 ~vil~vk~~~----------------~~~~~~~l~~~~~~~~iii~~~nG~~~~  113 (341)
T PRK08229         76 LVLVTVKSAA----------------TADAAAALAGHARPGAVVVSFQNGVRNA  113 (341)
T ss_pred             EEEEEecCcc----------------hHHHHHHHHhhCCCCCEEEEeCCCCCcH
Confidence            9999853221                12334445544 3567777788887654

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=97.57  E-value=0.0019  Score=62.44  Aligned_cols=106  Identities=16%  Similarity=0.106  Sum_probs=67.6

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcc-cCCCeEEEEe----CCCChhhhcCCCcEEE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHM-DTGAVVRGFL----GQPQLENALTGMDLVI   93 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~-~~~~~v~~~~----~t~dl~~al~~ADiVi   93 (369)
                      .++|.|+||+|++|++++..|+..+.  +|++...+.. ......+... .....+..+.    ...++.++++++|+||
T Consensus         5 ~~~vlVTGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi   82 (322)
T PLN02986          5 GKLVCVTGASGYIASWIVKLLLLRGY--TVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVF   82 (322)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEE
Confidence            46999999999999999999999887  7776554432 1111222111 1112333321    1234667789999999


Q ss_pred             EcCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHhhh
Q 017551           94 IPAGVPRK-PGMTRDDLFNINAGIVRTLCEGIAKC  127 (369)
Q Consensus        94 i~ag~p~k-~g~~r~~~~~~N~~i~~~i~~~i~~~  127 (369)
                      .+|+.... ......+++..|+.....+.+.+.+.
T Consensus        83 h~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~  117 (322)
T PLN02986         83 HTASPVFFTVKDPQTELIDPALKGTINVLNTCKET  117 (322)
T ss_pred             EeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhc
Confidence            99875321 11122345678898888998888765

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=97.56  E-value=0.00082  Score=66.14  Aligned_cols=114  Identities=18%  Similarity=0.105  Sum_probs=69.6

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchh--HHHHhhcccCCCeEEEEeC----CCChhhhcCCCcEE
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTGAVVRGFLG----QPQLENALTGMDLV   92 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g--~~~dL~~~~~~~~v~~~~~----t~dl~~al~~ADiV   92 (369)
                      ..+||.|+||+|++|++++..|.+.+.  +|++++.+....  ...++..   ..++..+.+    ..++.+++++.|+|
T Consensus         9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (353)
T PLN02896          9 ATGTYCVTGATGYIGSWLVKLLLQRGY--TVHATLRDPAKSLHLLSKWKE---GDRLRLFRADLQEEGSFDEAVKGCDGV   83 (353)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHhhcc---CCeEEEEECCCCCHHHHHHHHcCCCEE
Confidence            457999999999999999999999887  888887654221  1112211   123333221    12345677899999


Q ss_pred             EEcCCCCCCC---C-CCHH-----HHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           93 IIPAGVPRKP---G-MTRD-----DLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        93 ii~ag~p~k~---g-~~r~-----~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      |.+|+.+...   . .+..     ..+..|+.....+.+.+.++..-..++++|
T Consensus        84 ih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~S  137 (353)
T PLN02896         84 FHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTS  137 (353)
T ss_pred             EECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEe
Confidence            9999864311   1 1122     233344577778888877653223455554

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=97.55  E-value=0.00082  Score=70.39  Aligned_cols=117  Identities=14%  Similarity=0.086  Sum_probs=74.1

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHhhcc-----c--CCCeEEEEe----CCCChhh
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHM-----D--TGAVVRGFL----GQPQLEN   84 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~-----~--~~~~v~~~~----~t~dl~~   84 (369)
                      +..+.|.|+||+|++|+.++..|+..|.  +|++++.+...  .....+.+.     .  ...++..+.    ...++.+
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~--~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~  155 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGP  155 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHH
Confidence            3456899999999999999999998887  89999887622  222222110     0  011233221    1134556


Q ss_pred             hcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           85 ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        85 al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ++.++|+||..+|............+..|......+++.+.+..-. .||++|
T Consensus       156 aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVg-RIV~VS  207 (576)
T PLN03209        156 ALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVN-HFILVT  207 (576)
T ss_pred             HhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCC-EEEEEc
Confidence            7899999999988654322222334566777888888888766544 455544

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=97.54  E-value=0.00069  Score=64.02  Aligned_cols=99  Identities=21%  Similarity=0.254  Sum_probs=68.5

Q ss_pred             EEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCCCCC
Q 017551           23 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKP  102 (369)
Q Consensus        23 I~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p~k~  102 (369)
                      |.|+||+|++|++++..|+..+.  +|+.++.+......  +..    ..+....+ .+..++++++|+||..++.+...
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~--~~~----~~~~~~~~-~~~~~~~~~~D~Vvh~a~~~~~~   71 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGH--EVTILTRSPPAGAN--TKW----EGYKPWAP-LAESEALEGADAVINLAGEPIAD   71 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCC--EEEEEeCCCCCCCc--ccc----eeeecccc-cchhhhcCCCCEEEECCCCCccc
Confidence            57999999999999999998887  99999987621100  000    01111111 23457889999999999876533


Q ss_pred             C-C---CHHHHHHHHHHHHHHHHHHHhhhCCC
Q 017551          103 G-M---TRDDLFNINAGIVRTLCEGIAKCCPN  130 (369)
Q Consensus       103 g-~---~r~~~~~~N~~i~~~i~~~i~~~~p~  130 (369)
                      + .   ....+...|+...+.+.+.+.++...
T Consensus        72 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~  103 (292)
T TIGR01777        72 KRWTEERKQEIRDSRIDTTRALVEAIAAAEQK  103 (292)
T ss_pred             ccCCHHHHHHHHhcccHHHHHHHHHHHhcCCC
Confidence            2 1   23456678999999999999987643

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=97.53  E-value=0.00092  Score=64.95  Aligned_cols=113  Identities=18%  Similarity=0.151  Sum_probs=71.0

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC--CCcEE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT--GMDLV   92 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~--~ADiV   92 (369)
                      |||.|+||+|++|++++..|+..+.  +|+++|...  .......+.+.. ..++..+. .-+|   +.++++  ++|+|
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   77 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGH--DVVILDNLCNSKRSVLPVIERLG-GKHPTFVEGDIRNEALLTEILHDHAIDTV   77 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCC--eEEEEecCCCchHhHHHHHHHhc-CCCceEEEccCCCHHHHHHHHhcCCCCEE
Confidence            6899999999999999999998887  899998643  111111122111 11111111 1122   334454  68999


Q ss_pred             EEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           93 IIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        93 ii~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      |..|+.....  .....+.+..|+.....+++.+.+..-. .++++|
T Consensus        78 vh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S  123 (338)
T PRK10675         78 IHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK-NLIFSS  123 (338)
T ss_pred             EECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEec
Confidence            9998764321  1234567889999999999988876433 344444

>PRK08269 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=97.51  E-value=0.00057  Score=66.84  Aligned_cols=112  Identities=15%  Similarity=0.135  Sum_probs=73.1

Q ss_pred             cHHHHHHHHHhCCCCcEEEEEeCCCc--h--------hH--HHH----hhcc-c--------CCCeEEEEeCCCChhhhc
Q 017551           32 IGQPLAMLMKINPLVSVLHLYDVVNT--P--------GV--TAD----ISHM-D--------TGAVVRGFLGQPQLENAL   86 (369)
Q Consensus        32 vGs~la~~l~~~~~~~el~L~D~~~~--~--------g~--~~d----L~~~-~--------~~~~v~~~~~t~dl~~al   86 (369)
                      +|+.++..++..|+  +|+|+|++..  .        +.  +.+    +... .        ...+++..+ +.|+++++
T Consensus         1 MG~giA~~~a~~G~--~V~l~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~-~~~~~~a~   77 (314)
T PRK08269          1 MGQGIALAFAFAGH--DVTLIDFKPRDAAGWRALDAEARAEIERTLAALVALGRIDAAQADAVLARIAVVA-RDGAADAL   77 (314)
T ss_pred             CcHHHHHHHHhCCC--eEEEEeCCcccchhhHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEeec-CcchHHHh
Confidence            57889999999998  9999999871  1        11  111    1000 0        123555432 23467889


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe
Q 017551           87 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  165 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~  165 (369)
                      ++||+||.+.              .+|..+.+.+..++.+.++ ++++  .||-..+...-+++   ..  -.|.|++|+
T Consensus        78 ~~aD~ViEav--------------~E~~~~K~~~f~~l~~~~~~~~il--aSntS~~~~~~la~---~~--~~p~r~~g~  136 (314)
T PRK08269         78 ADADLVFEAV--------------PEVLDAKREALRWLGRHVDADAII--ASTTSTFLVTDLQR---HV--AHPERFLNA  136 (314)
T ss_pred             ccCCEEEECC--------------cCCHHHHHHHHHHHHhhCCCCcEE--EEccccCCHHHHHh---hc--CCcccEEEE
Confidence            9999999995              6678899999999999985 5543  88877764433322   22  135678887


Q ss_pred             ch
Q 017551          166 TM  167 (369)
Q Consensus       166 t~  167 (369)
                      ..
T Consensus       137 Hf  138 (314)
T PRK08269        137 HW  138 (314)
T ss_pred             ec
Confidence            43

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=97.50  E-value=0.00073  Score=64.47  Aligned_cols=100  Identities=17%  Similarity=0.152  Sum_probs=68.2

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccC-CCeEEEEeCCCChhhhcCCC-cEEEEcCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT-GAVVRGFLGQPQLENALTGM-DLVIIPAGV   98 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~-~~~v~~~~~t~dl~~al~~A-DiVii~ag~   98 (369)
                      ++|.|+||+|++|++++..|.+.++  +|+.+|.......... .+... ...+..   .....+++++. |.||.+|+.
T Consensus         1 ~~ILVtG~tGfiG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~-~~~~~~~~d~~~---~~~~~~~~~~~~d~vih~aa~   74 (314)
T COG0451           1 MRILVTGGAGFIGSHLVERLLAAGH--DVRGLDRLRDGLDPLL-SGVEFVVLDLTD---RDLVDELAKGVPDAVIHLAAQ   74 (314)
T ss_pred             CeEEEEcCcccHHHHHHHHHHhCCC--eEEEEeCCCccccccc-cccceeeecccc---hHHHHHHHhcCCCEEEEcccc
Confidence            3599999999999999999999988  9999998652211111 11110 011110   12234556677 999999887


Q ss_pred             CCCCCCCH---HHHHHHHHHHHHHHHHHHhh
Q 017551           99 PRKPGMTR---DDLFNINAGIVRTLCEGIAK  126 (369)
Q Consensus        99 p~k~g~~r---~~~~~~N~~i~~~i~~~i~~  126 (369)
                      ...++..+   .++...|+...+.+.++..+
T Consensus        75 ~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~  105 (314)
T COG0451          75 SSVPDSNASDPAEFLDVNVDGTLNLLEAARA  105 (314)
T ss_pred             CchhhhhhhCHHHHHHHHHHHHHHHHHHHHH
Confidence            65444332   35789999999999999998

>PLN02583 cinnamoyl-CoA reductase

Probab=97.49  E-value=0.0029  Score=60.88  Aligned_cols=114  Identities=15%  Similarity=0.098  Sum_probs=72.5

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch----hHHHHhhcccCCCeEEEEe----CCCChhhhcCCCcE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP----GVTADISHMDTGAVVRGFL----GQPQLENALTGMDL   91 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~----g~~~dL~~~~~~~~v~~~~----~t~dl~~al~~ADi   91 (369)
                      .++|.|+||+|++|+.++..|+.+|.  +|++.+.+...    ....++...  ..++..+.    ...++.+++.++|.
T Consensus         6 ~k~vlVTGatG~IG~~lv~~Ll~~G~--~V~~~~R~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~~~~~l~~~d~   81 (297)
T PLN02583          6 SKSVCVMDASGYVGFWLVKRLLSRGY--TVHAAVQKNGETEIEKEIRGLSCE--EERLKVFDVDPLDYHSILDALKGCSG   81 (297)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCC--EEEEEEcCchhhhHHHHHHhcccC--CCceEEEEecCCCHHHHHHHHcCCCE
Confidence            45899999999999999999999998  88888764311    111222110  11233221    12345678999999


Q ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           92 VIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        92 Vii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      |+..++.+........+++..|+.....+.+.+.+..--..+|++|
T Consensus        82 v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~S  127 (297)
T PLN02583         82 LFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTS  127 (297)
T ss_pred             EEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Confidence            9876654322111235677889999999999987763112344443

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=97.48  E-value=0.001  Score=65.06  Aligned_cols=97  Identities=22%  Similarity=0.281  Sum_probs=61.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcc------c--CCCeEEEEeCCCChhhhcCCCcE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM------D--TGAVVRGFLGQPQLENALTGMDL   91 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~------~--~~~~v~~~~~t~dl~~al~~ADi   91 (369)
                      .|||+|||+ |.+|+.++..|...+.  +|.+||.+..+.....-.+.      .  ....+..   ++++.++++++|+
T Consensus         4 ~m~I~iIG~-G~mG~~ia~~L~~~G~--~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~---~~~~~e~~~~aD~   77 (328)
T PRK14618          4 GMRVAVLGA-GAWGTALAVLAASKGV--PVRLWARRPEFAAALAAERENREYLPGVALPAELYP---TADPEEALAGADF   77 (328)
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEE---eCCHHHHHcCCCE
Confidence            579999999 9999999999999887  99999997522111111110      0  0111332   3467788899999


Q ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC
Q 017551           92 VIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN  141 (369)
Q Consensus        92 Vii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~  141 (369)
                      ||++.  |   ..           .++++.+.   ..|...++..+|..+
T Consensus        78 Vi~~v--~---~~-----------~~~~v~~~---l~~~~~vi~~~~Gi~  108 (328)
T PRK14618         78 AVVAV--P---SK-----------ALRETLAG---LPRALGYVSCAKGLA  108 (328)
T ss_pred             EEEEC--c---hH-----------HHHHHHHh---cCcCCEEEEEeeccc
Confidence            99984  1   10           12333333   236667787888654

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=97.48  E-value=0.00037  Score=67.18  Aligned_cols=99  Identities=18%  Similarity=0.169  Sum_probs=65.4

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcC--CCcEEEEcCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLVIIPAGV   98 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~--~ADiVii~ag~   98 (369)
                      |||.|+||+|++|++++..|...+   +++.+|.... ....|+.+            ...+.++++  ++|+||.+|+.
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g---~V~~~~~~~~-~~~~Dl~d------------~~~~~~~~~~~~~D~Vih~Aa~   64 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG---NLIALDVHST-DYCGDFSN------------PEGVAETVRKIRPDVIVNAAAH   64 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC---CEEEeccccc-cccCCCCC------------HHHHHHHHHhcCCCEEEECCcc
Confidence            689999999999999999988776   4677776421 00011111            122445565  58999999876


Q ss_pred             CCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           99 PRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        99 p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ....  ..........|+.....+++.+.+..  ..++.+|
T Consensus        65 ~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g--~~~v~~S  103 (299)
T PRK09987         65 TAVDKAESEPEFAQLLNATSVEAIAKAANEVG--AWVVHYS  103 (299)
T ss_pred             CCcchhhcCHHHHHHHHHHHHHHHHHHHHHcC--CeEEEEc
Confidence            4321  12334445789999999999998765  3455444

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=97.43  E-value=0.0011  Score=64.77  Aligned_cols=106  Identities=13%  Similarity=0.013  Sum_probs=66.4

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch---hHHHHhh-cc--cCCCeEEEEeC----CCChhhhcCC--
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP---GVTADIS-HM--DTGAVVRGFLG----QPQLENALTG--   88 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~---g~~~dL~-~~--~~~~~v~~~~~----t~dl~~al~~--   88 (369)
                      ++|.|+||+|++|++++..|+..+.  +|+++|.+...   .....+. +.  .....+....+    ..++.+++++  
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~   78 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGY--EVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIK   78 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCC--EEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCC
Confidence            4899999999999999999999887  99999976421   1111121 00  00122332211    1234456664  


Q ss_pred             CcEEEEcCCCCCCC-C-CCHHHHHHHHHHHHHHHHHHHhhhC
Q 017551           89 MDLVIIPAGVPRKP-G-MTRDDLFNINAGIVRTLCEGIAKCC  128 (369)
Q Consensus        89 ADiVii~ag~p~k~-g-~~r~~~~~~N~~i~~~i~~~i~~~~  128 (369)
                      .|+||.+|+..... . ......+..|+.....+.+.+.+.+
T Consensus        79 ~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~  120 (343)
T TIGR01472        79 PTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLG  120 (343)
T ss_pred             CCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhC
Confidence            59999999864322 1 1234445668778888888888764

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=97.42  E-value=0.00071  Score=59.58  Aligned_cols=91  Identities=18%  Similarity=0.232  Sum_probs=58.5

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP   99 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p   99 (369)
                      ++||++||. |.+|+.++..|...++  +|+.||++..  ...++.+..    .+.   ..++.+++++||+|+..-   
T Consensus         1 m~~Ig~IGl-G~mG~~~a~~L~~~g~--~v~~~d~~~~--~~~~~~~~g----~~~---~~s~~e~~~~~dvvi~~v---   65 (163)
T PF03446_consen    1 MMKIGFIGL-GNMGSAMARNLAKAGY--EVTVYDRSPE--KAEALAEAG----AEV---ADSPAEAAEQADVVILCV---   65 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTT--EEEEEESSHH--HHHHHHHTT----EEE---ESSHHHHHHHBSEEEE-S---
T ss_pred             CCEEEEEch-HHHHHHHHHHHHhcCC--eEEeeccchh--hhhhhHHhh----hhh---hhhhhhHhhcccceEeec---
Confidence            369999999 9999999999999998  9999998752  222333321    333   245788999999999973   


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHH--HhhhC-CCeEEEEec
Q 017551          100 RKPGMTRDDLFNINAGIVRTLCEG--IAKCC-PNATVNLIS  137 (369)
Q Consensus       100 ~k~g~~r~~~~~~N~~i~~~i~~~--i~~~~-p~a~viv~t  137 (369)
                                  .+.+.++++...  +.... +..++|..|
T Consensus        66 ------------~~~~~v~~v~~~~~i~~~l~~g~iiid~s   94 (163)
T PF03446_consen   66 ------------PDDDAVEAVLFGENILAGLRPGKIIIDMS   94 (163)
T ss_dssp             ------------SSHHHHHHHHHCTTHGGGS-TTEEEEE-S
T ss_pred             ------------ccchhhhhhhhhhHHhhccccceEEEecC
Confidence                        123445566555  44444 445554443

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PLN02572 UDP-sulfoquinovose synthase

Probab=97.41  E-value=0.00045  Score=70.60  Aligned_cols=115  Identities=16%  Similarity=0.153  Sum_probs=71.4

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc---hh------------HHHHh---hcccCCCeEEEEeC--
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PG------------VTADI---SHMDTGAVVRGFLG--   78 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~---~g------------~~~dL---~~~~~~~~v~~~~~--   78 (369)
                      +.+||.|+||+|+||++++..|+..+.  +|+++|....   ..            ....+   .+.. ...+..+.+  
T Consensus        46 ~~k~VLVTGatGfIGs~Lv~~L~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~v~~v~~Dl  122 (442)
T PLN02572         46 KKKKVMVIGGDGYCGWATALHLSKRGY--EVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVS-GKEIELYVGDI  122 (442)
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeccccccccccccccccccccchHHHHHHHHHhh-CCcceEEECCC
Confidence            357999999999999999999999887  8999985321   00            00001   1100 112332211  


Q ss_pred             --CCChhhhcC--CCcEEEEcCCCCCCC-CC-C---HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe
Q 017551           79 --QPQLENALT--GMDLVIIPAGVPRKP-GM-T---RDDLFNINAGIVRTLCEGIAKCCPNATVNLI  136 (369)
Q Consensus        79 --t~dl~~al~--~ADiVii~ag~p~k~-g~-~---r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~  136 (369)
                        ..++.++++  ++|+||..|+....+ .. +   ....+..|+.....+.+.+.+++....++.+
T Consensus       123 ~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~  189 (442)
T PLN02572        123 CDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKL  189 (442)
T ss_pred             CCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEE
Confidence              123445565  489999998654321 11 1   1234578999999999999888765545544

>PRK06249 2-dehydropantoate 2-reductase; Provisional

Probab=97.41  E-value=0.0013  Score=64.09  Aligned_cols=123  Identities=16%  Similarity=0.242  Sum_probs=73.7

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHH-Hhh--cccCC---CeEEEEeCCCChhhhcCCCcE
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA-DIS--HMDTG---AVVRGFLGQPQLENALTGMDL   91 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~-dL~--~~~~~---~~v~~~~~t~dl~~al~~ADi   91 (369)
                      ...|||+|+|+ |.||..++..|...+.  ++.+++.+....... .+.  .....   ..+..   .++. ++...+|+
T Consensus         3 ~~~m~I~IiG~-GaiG~~lA~~L~~~g~--~V~~~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~~-~~~~~~D~   75 (313)
T PRK06249          3 SETPRIGIIGT-GAIGGFYGAMLARAGF--DVHFLLRSDYEAVRENGLQVDSVHGDFHLPPVQA---YRSA-EDMPPCDW   75 (313)
T ss_pred             CcCcEEEEECC-CHHHHHHHHHHHHCCC--eEEEEEeCCHHHHHhCCeEEEeCCCCeeecCceE---Ecch-hhcCCCCE
Confidence            45689999999 9999999999999887  999999875211111 000  00000   11222   1232 35788999


Q ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhc
Q 017551           92 VIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLD  169 (369)
Q Consensus        92 Vii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld  169 (369)
                      ||++.-...                ..++.+.+... .|++.++...|=.+.--     .+.+.  +|+.+|++- +...
T Consensus        76 vilavK~~~----------------~~~~~~~l~~~~~~~~~iv~lqNG~~~~e-----~l~~~--~~~~~v~~g~~~~~  132 (313)
T PRK06249         76 VLVGLKTTA----------------NALLAPLIPQVAAPDAKVLLLQNGLGVEE-----QLREI--LPAEHLLGGLCFIC  132 (313)
T ss_pred             EEEEecCCC----------------hHhHHHHHhhhcCCCCEEEEecCCCCcHH-----HHHHH--CCCCcEEEEeeeEe
Confidence            999852211                12333344433 37888888889877543     23333  677887754 5544


Q ss_pred             H
Q 017551          170 V  170 (369)
Q Consensus       170 ~  170 (369)
                      .
T Consensus       133 a  133 (313)
T PRK06249        133 S  133 (313)
T ss_pred             E
Confidence            3

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=97.37  E-value=0.0031  Score=67.64  Aligned_cols=120  Identities=15%  Similarity=0.037  Sum_probs=73.3

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC-CCC---hhhhc--CCCcE
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QPQ---LENAL--TGMDL   91 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~-t~d---l~~al--~~ADi   91 (369)
                      -+++||.|+||+|+||++++..|...+...+|+.+|..........+........++...+ -+|   +...+  .++|+
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~   83 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDT   83 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCE
Confidence            3568999999999999999999988743348999997431111111111111123443321 122   22222  68999


Q ss_pred             EEEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           92 VIIPAGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        92 Vii~ag~p~k~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ||.+|+......  ....++...|+.....+.+.+++...-..+|.+|
T Consensus        84 ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~S  131 (668)
T PLN02260         84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVS  131 (668)
T ss_pred             EEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEc
Confidence            999998653211  1234567889999999999988765323455544

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=97.31  E-value=0.002  Score=63.14  Aligned_cols=106  Identities=15%  Similarity=0.100  Sum_probs=65.9

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe----CCCChhhhcC--CCcEEEE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL----GQPQLENALT--GMDLVII   94 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~----~t~dl~~al~--~ADiVii   94 (369)
                      |||.|+||+|++|+.++..|...+. ..++.+|.....+....+.+......+....    ...++.++++  ++|+||.
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   79 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQ-DSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMH   79 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCC-CeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEE
Confidence            6899999999999999999988774 2466677543111111111111011222111    1223445565  4899999


Q ss_pred             cCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhhh
Q 017551           95 PAGVPRK--PGMTRDDLFNINAGIVRTLCEGIAKC  127 (369)
Q Consensus        95 ~ag~p~k--~g~~r~~~~~~N~~i~~~i~~~i~~~  127 (369)
                      +|+....  ......+.+..|+.....+++.+.++
T Consensus        80 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~  114 (352)
T PRK10084         80 LAAESHVDRSITGPAAFIETNIVGTYVLLEAARNY  114 (352)
T ss_pred             CCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHh
Confidence            9986432  12234567899999999999999875

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=97.30  E-value=0.0011  Score=62.88  Aligned_cols=95  Identities=23%  Similarity=0.305  Sum_probs=67.3

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCC--cEEEEcCCCC
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGM--DLVIIPAGVP   99 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~A--DiVii~ag~p   99 (369)
                      ||.|+||+|++|+.++..|...+.  +|++++...     .|+.+            ..++.++++++  |+||.+++.+
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~--~v~~~~r~~-----~d~~~------------~~~~~~~~~~~~~d~vi~~a~~~   61 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGR--VVVALTSSQ-----LDLTD------------PEALERLLRAIRPDAVVNTAAYT   61 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCC--EEEEeCCcc-----cCCCC------------HHHHHHHHHhCCCCEEEECCccc
Confidence            689999999999999999998887  888888641     12221            12345667766  9999998865


Q ss_pred             CCCC--CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551          100 RKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus       100 ~k~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ....  .........|+.....+++.+.+...  .++++|
T Consensus        62 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~v~~S   99 (287)
T TIGR01214        62 DVDGAESDPEKAFAVNALAPQNLARAAARHGA--RLVHIS   99 (287)
T ss_pred             cccccccCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Confidence            3221  23455678889999999998877643  344444

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=97.29  E-value=0.0017  Score=63.42  Aligned_cols=109  Identities=16%  Similarity=-0.016  Sum_probs=68.9

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc---hhHHHHhhcc--cCCCeEEEEe----CCCChhhhcCC-
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHM--DTGAVVRGFL----GQPQLENALTG-   88 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~---~g~~~dL~~~--~~~~~v~~~~----~t~dl~~al~~-   88 (369)
                      +.++|.|+||+|++|++++..|+..+.  +|+++|....   ......+...  .....+....    ...++.+++++ 
T Consensus         5 ~~~~vlVTGatGfiG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   82 (340)
T PLN02653          5 PRKVALITGITGQDGSYLTEFLLSKGY--EVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI   82 (340)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCC--EEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence            457999999999999999999999987  8999987541   1111112110  0111222221    11234455654 


Q ss_pred             -CcEEEEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhCC
Q 017551           89 -MDLVIIPAGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCP  129 (369)
Q Consensus        89 -ADiVii~ag~p~k~g--~~r~~~~~~N~~i~~~i~~~i~~~~p  129 (369)
                       .|+||.+|+......  ......+..|+.....+++.+.++..
T Consensus        83 ~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~  126 (340)
T PLN02653         83 KPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQ  126 (340)
T ss_pred             CCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhcc
Confidence             599999998743221  12344557788888899998887764

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=97.29  E-value=0.0026  Score=58.21  Aligned_cols=100  Identities=18%  Similarity=0.200  Sum_probs=61.4

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-----chhH-------------H--HHhhcccCCCeEEEEe--
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-----TPGV-------------T--ADISHMDTGAVVRGFL--   77 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-----~~g~-------------~--~dL~~~~~~~~v~~~~--   77 (369)
                      ..||+|+|+ |.+|+.++..|+..|. .+|+|+|.+.     +..+             +  .-|.+.....++..+.  
T Consensus        21 ~~~V~IvG~-GglGs~ia~~La~~Gv-g~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~~   98 (200)
T TIGR02354        21 QATVAICGL-GGLGSNVAINLARAGI-GKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDEK   98 (200)
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHcCC-CEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeeee
Confidence            459999999 9999999999999885 5899999983     1100             0  1112211123333321  


Q ss_pred             -CCCChhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe
Q 017551           78 -GQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI  136 (369)
Q Consensus        78 -~t~dl~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~  136 (369)
                       ...++.+.++++|+||.+               .+|.+.-..+.+.+.+..+..+++..
T Consensus        99 i~~~~~~~~~~~~DlVi~a---------------~Dn~~~k~~l~~~~~~~~~~~~ii~~  143 (200)
T TIGR02354        99 ITEENIDKFFKDADIVCEA---------------FDNAEAKAMLVNAVLEKYKDKYLIAA  143 (200)
T ss_pred             CCHhHHHHHhcCCCEEEEC---------------CCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence             123445568999999998               23444455555666655555544443

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PLN02240 UDP-glucose 4-epimerase

Probab=97.27  E-value=0.0052  Score=60.03  Aligned_cols=116  Identities=18%  Similarity=0.157  Sum_probs=71.9

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhccc--CCCeEEEEe----CCCChhhhcC--C
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMD--TGAVVRGFL----GQPQLENALT--G   88 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~--~~~~v~~~~----~t~dl~~al~--~   88 (369)
                      ..+||.|+||+|++|++++..|+..+.  +|+++|....  ......+.+..  ....++...    ...++.++++  +
T Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~   81 (352)
T PLN02240          4 MGRTILVTGGAGYIGSHTVLQLLLAGY--KVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTR   81 (352)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCC
Confidence            346999999999999999999998886  8999986431  11111111110  011222221    1123334444  6


Q ss_pred             CcEEEEcCCCCCC-CC-CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           89 MDLVIIPAGVPRK-PG-MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        89 ADiVii~ag~p~k-~g-~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      +|+||.+|+.+.. .. ......+..|+.....+++.+.+..... ++++|
T Consensus        82 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~v~~S  131 (352)
T PLN02240         82 FDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKK-LVFSS  131 (352)
T ss_pred             CCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCE-EEEEc
Confidence            8999999886421 11 2345678899999999999887764444 44444

>PRK06194 hypothetical protein; Provisional

Probab=97.26  E-value=0.0079  Score=56.98  Aligned_cols=115  Identities=21%  Similarity=0.185  Sum_probs=67.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT------   87 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~------   87 (369)
                      .++|.|+||+|++|+.++..|+.+|.  +|+++|.+.  ......++...  ..++..+. .-+|   ++++++      
T Consensus         6 ~k~vlVtGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~~~~~   81 (287)
T PRK06194          6 GKVAVITGAASGFGLAFARIGAALGM--KLVLADVQQDALDRAVAELRAQ--GAEVLGVRTDVSDAAQVEALADAALERF   81 (287)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            35899999999999999999999987  899999875  22333334321  22333222 1122   323333      


Q ss_pred             -CCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHH----HHHHHhhhCCC-----eEEEEecC
Q 017551           88 -GMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRT----LCEGIAKCCPN-----ATVNLISN  138 (369)
Q Consensus        88 -~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i~~~----i~~~i~~~~p~-----a~viv~tN  138 (369)
                       ..|+||..||.....   ..+.   ...+..|+.....    +.+.+.+.+.+     +.++++|.
T Consensus        82 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS  148 (287)
T PRK06194         82 GAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTAS  148 (287)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCC
Confidence             469999999874321   1222   2335566554444    44445554432     55666543

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=97.26  E-value=0.0032  Score=63.08  Aligned_cols=75  Identities=23%  Similarity=0.256  Sum_probs=51.3

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch-hHHHHhhccc-CCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMD-TGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~-g~~~dL~~~~-~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      ++||.|||| |+||+.++..|++++. .+|++.|....+ ..+.+..+.. ....+... ....+.+.+++.|+||.++.
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d-~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~-d~~al~~li~~~d~VIn~~p   77 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGD-GEVTIADRSKEKCARIAELIGGKVEALQVDAA-DVDALVALIKDFDLVINAAP   77 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCC-ceEEEEeCCHHHHHHHHhhccccceeEEeccc-ChHHHHHHHhcCCEEEEeCC
Confidence            469999999 9999999999999985 699999997522 2222222111 01122221 23456788999999999974

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.26  E-value=0.0019  Score=63.67  Aligned_cols=97  Identities=23%  Similarity=0.265  Sum_probs=65.9

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      +.++|.|+||+|+||+.++..|....-+.+|++++.+..  .....++.+    ..      ..++.+++.++|+||..+
T Consensus       154 ~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~----~~------i~~l~~~l~~aDiVv~~t  223 (340)
T PRK14982        154 SKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG----GK------ILSLEEALPEADIVVWVA  223 (340)
T ss_pred             CCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc----cc------HHhHHHHHccCCEEEECC
Confidence            446999999999999999999976433458999998652  222222221    11      124678999999999998


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCh
Q 017551           97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNST  143 (369)
Q Consensus        97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~  143 (369)
                      +.|...-.+..++                  .+..+++-++.|=|+-
T Consensus       224 s~~~~~~I~~~~l------------------~~~~~viDiAvPRDVd  252 (340)
T PRK14982        224 SMPKGVEIDPETL------------------KKPCLMIDGGYPKNLD  252 (340)
T ss_pred             cCCcCCcCCHHHh------------------CCCeEEEEecCCCCCC
Confidence            8875211222111                  3668888889998875

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=97.25  E-value=0.0033  Score=61.63  Aligned_cols=106  Identities=18%  Similarity=0.099  Sum_probs=66.3

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe----CCCChhhhcCC--CcEEEE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL----GQPQLENALTG--MDLVII   94 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~----~t~dl~~al~~--ADiVii   94 (369)
                      +||.|+||+|++|++++..|...+. ..++++|.....+....+.+......+....    ..+++.+++++  .|+||.
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih   80 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETS-DAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMH   80 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCC-CEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEE
Confidence            5899999999999999999998874 2466777643211111122111011222111    12334556664  899999


Q ss_pred             cCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhh
Q 017551           95 PAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKC  127 (369)
Q Consensus        95 ~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~  127 (369)
                      +||.....  ..........|+.....+++.+.++
T Consensus        81 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~  115 (355)
T PRK10217         81 LAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAY  115 (355)
T ss_pred             CCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHh
Confidence            99865321  1234567788999999999998765

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=97.24  E-value=0.0021  Score=61.58  Aligned_cols=64  Identities=22%  Similarity=0.266  Sum_probs=45.6

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      |||+|||. |.+|..++..|...+.  +|.+||.+.. ...+.+..      .+..  .+++. +++++||+||++.
T Consensus         1 m~I~IIG~-G~mG~sla~~L~~~g~--~V~~~d~~~~~~~~a~~~g------~~~~--~~~~~-~~~~~aDlVilav   65 (279)
T PRK07417          1 MKIGIVGL-GLIGGSLGLDLRSLGH--TVYGVSRRESTCERAIERG------LVDE--ASTDL-SLLKDCDLVILAL   65 (279)
T ss_pred             CeEEEEee-cHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHCC------Cccc--ccCCH-hHhcCCCEEEEcC
Confidence            58999998 9999999999998887  8999998752 11222111      1111  12344 5789999999984

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=97.23  E-value=0.0041  Score=59.89  Aligned_cols=154  Identities=18%  Similarity=0.138  Sum_probs=97.5

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC-CCChhhhc--CCCcEEEEcCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QPQLENAL--TGMDLVIIPAG   97 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~-t~dl~~al--~~ADiVii~ag   97 (369)
                      |+|.|+|++|+|||+.+..|++.+.  +++.+|... .|...-+.... ...+.+... ..-+.+.|  ...|.||..||
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~--~vvV~DNL~-~g~~~~v~~~~-~~f~~gDi~D~~~L~~vf~~~~idaViHFAa   76 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGH--EVVVLDNLS-NGHKIALLKLQ-FKFYEGDLLDRALLTAVFEENKIDAVVHFAA   76 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCC--eEEEEecCC-CCCHHHhhhcc-CceEEeccccHHHHHHHHHhcCCCEEEECcc
Confidence            6899999999999999999999998  999999865 12111111110 111221110 01122222  47899999887


Q ss_pred             CCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEE-----EecCCCCChhHHHHHHHHHhCCCCCCcEEEechhcH
Q 017551           98 VPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVN-----LISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDV  170 (369)
Q Consensus        98 ~p~k~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a~vi-----v~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t~Ld~  170 (369)
                      .-..+.  +..+.+...|+--...+.+.|.++..+-+|.     ++.+|..+  |+. |    ..-..|.+--|-|-|-+
T Consensus        77 ~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~--PI~-E----~~~~~p~NPYG~sKlm~  149 (329)
T COG1087          77 SISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTS--PIS-E----TSPLAPINPYGRSKLMS  149 (329)
T ss_pred             ccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCc--ccC-C----CCCCCCCCcchhHHHHH
Confidence            644322  2367888999999999999999999877554     23456542  221 2    22233566677775656


Q ss_pred             HHHHHHHHHHhCCCC
Q 017551          171 VRANTFVAEVLGLDP  185 (369)
Q Consensus       171 ~R~~~~la~~lgv~~  185 (369)
                      -++.+.+++..+...
T Consensus       150 E~iL~d~~~a~~~~~  164 (329)
T COG1087         150 EEILRDAAKANPFKV  164 (329)
T ss_pred             HHHHHHHHHhCCCcE
Confidence            666666777766443

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.21  E-value=0.0024  Score=61.51  Aligned_cols=76  Identities=24%  Similarity=0.319  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc-
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP-   95 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~-   95 (369)
                      +..||+|+|| |++|.++++.|...+ +.+|.++|++.  +...+.++.+..  +...... ..++.++++++|+||.+ 
T Consensus       126 ~~k~vlIlGa-GGaaraia~aL~~~G-~~~I~I~nR~~~ka~~la~~l~~~~--~~~~~~~-~~~~~~~~~~aDiVInaT  200 (284)
T PRK12549        126 SLERVVQLGA-GGAGAAVAHALLTLG-VERLTIFDVDPARAAALADELNARF--PAARATA-GSDLAAALAAADGLVHAT  200 (284)
T ss_pred             cCCEEEEECC-cHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHhhC--CCeEEEe-ccchHhhhCCCCEEEECC
Confidence            4469999999 999999999999887 45899999986  344555554432  2222221 23455678999999997 


Q ss_pred             -CCCC
Q 017551           96 -AGVP   99 (369)
Q Consensus        96 -ag~p   99 (369)
                       +|++
T Consensus       201 p~Gm~  205 (284)
T PRK12549        201 PTGMA  205 (284)
T ss_pred             cCCCC
Confidence             5654

>PRK07201 short chain dehydrogenase; Provisional

Probab=97.20  E-value=0.0063  Score=64.80  Aligned_cols=111  Identities=14%  Similarity=0.089  Sum_probs=68.8

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC-CC---------ChhhhcCCCc
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QP---------QLENALTGMD   90 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~-t~---------dl~~al~~AD   90 (369)
                      |||.|+||+|++|++++..|.......+|++++.+.......++.......+++...+ -+         ++ +.++++|
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-~~l~~~D   79 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADI-AELGDID   79 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHH-HHhcCCC
Confidence            5899999999999999999985322338999998652222222211100022332211 01         12 2348999


Q ss_pred             EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEE
Q 017551           91 LVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATV  133 (369)
Q Consensus        91 iVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~v  133 (369)
                      +||.+|+... ......+....|+.....+++.+.+.....++
T Consensus        80 ~Vih~Aa~~~-~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v  121 (657)
T PRK07201         80 HVVHLAAIYD-LTADEEAQRAANVDGTRNVVELAERLQAATFH  121 (657)
T ss_pred             EEEECceeec-CCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEE
Confidence            9999987532 22344556678999999999988876434433

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=97.19  E-value=0.0023  Score=61.45  Aligned_cols=108  Identities=11%  Similarity=0.117  Sum_probs=65.7

Q ss_pred             EEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCC-hhhhc-----CCCcEEEEcC
Q 017551           23 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ-LENAL-----TGMDLVIIPA   96 (369)
Q Consensus        23 I~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~d-l~~al-----~~ADiVii~a   96 (369)
                      |.|+||+|++|++++..|+..+. ..+.++|..........+.+... .+..   ...+ +.+++     .++|+||.+|
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~-~~v~~~~~~~~~~~~~~~~~~~~-~d~~---~~~~~~~~~~~~~~~~~~d~Vih~A   76 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGI-TDILVVDNLKDGTKFVNLVDLDI-ADYM---DKEDFLAQIMAGDDFGDIEAIFHEG   76 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCC-ceEEEecCCCcchHHHhhhhhhh-hhhh---hHHHHHHHHhcccccCCccEEEECc
Confidence            78999999999999999998875 35677787542111111111110 0000   0011 12222     3799999998


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      +.+.............|+.....+.+.+.+..-  .++..|
T Consensus        77 ~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~--~~i~~S  115 (308)
T PRK11150         77 ACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI--PFLYAS  115 (308)
T ss_pred             eecCCcCCChHHHHHHHHHHHHHHHHHHHHcCC--cEEEEc
Confidence            864433334455678899999999999887653  345443

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=97.16  E-value=0.00092  Score=63.72  Aligned_cols=78  Identities=19%  Similarity=0.152  Sum_probs=53.0

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      ...+++|+|+||+|||||+++-.|+..+.  +|...|.... +....+.|....++.+..- ..--..-+..+|-|+..|
T Consensus        24 p~~~lrI~itGgaGFIgSHLvdkLm~egh--~VIa~Dn~ft-g~k~n~~~~~~~~~fel~~-hdv~~pl~~evD~IyhLA   99 (350)
T KOG1429|consen   24 PSQNLRILITGGAGFIGSHLVDKLMTEGH--EVIALDNYFT-GRKENLEHWIGHPNFELIR-HDVVEPLLKEVDQIYHLA   99 (350)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHhcCC--eEEEEecccc-cchhhcchhccCcceeEEE-eechhHHHHHhhhhhhhc
Confidence            34468999999999999999999999996  9999998752 2222244443333333211 111134688999999987


Q ss_pred             CC
Q 017551           97 GV   98 (369)
Q Consensus        97 g~   98 (369)
                      ..
T Consensus       100 ap  101 (350)
T KOG1429|consen  100 AP  101 (350)
T ss_pred             cC
Confidence            53

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.15  E-value=0.0011  Score=55.45  Aligned_cols=72  Identities=21%  Similarity=0.279  Sum_probs=48.3

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHH-Hhhc-ccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA-DISH-MDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~-dL~~-~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      ||+|+||+|.+|+.+..+|...+.+..+.+++.....|... +... ......+....  .+ .+.+.++|+||.+.
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~Dvvf~a~   74 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED--AD-PEELSDVDVVFLAL   74 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE--TS-GHHHTTESEEEE-S
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee--cc-hhHhhcCCEEEecC
Confidence            79999999999999999999988877788888776233222 2211 11123333322  23 36789999999984

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=97.15  E-value=0.0023  Score=61.90  Aligned_cols=95  Identities=18%  Similarity=0.220  Sum_probs=60.2

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  100 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p~  100 (369)
                      |||+|||. |.+|++++..|...++  +|.+||.+...  +..+....    ........++.++++++|+|+++.  |-
T Consensus         1 M~Ig~IGl-G~mG~~la~~L~~~g~--~V~~~dr~~~~--~~~l~~~g----~~~~~s~~~~~~~~~~~dvIi~~v--p~   69 (298)
T TIGR00872         1 MQLGLIGL-GRMGANIVRRLAKRGH--DCVGYDHDQDA--VKAMKEDR----TTGVANLRELSQRLSAPRVVWVMV--PH   69 (298)
T ss_pred             CEEEEEcc-hHHHHHHHHHHHHCCC--EEEEEECCHHH--HHHHHHcC----CcccCCHHHHHhhcCCCCEEEEEc--Cc
Confidence            58999999 9999999999999887  99999998632  12222211    111111223445667899999983  21


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCC
Q 017551          101 KPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPV  140 (369)
Q Consensus       101 k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv  140 (369)
                                    ..+.++++.+.... ++.+++..||..
T Consensus        70 --------------~~~~~v~~~l~~~l~~g~ivid~st~~   96 (298)
T TIGR00872        70 --------------GIVDAVLEELAPTLEKGDIVIDGGNSY   96 (298)
T ss_pred             --------------hHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence                          12344445555444 566777776653

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PRK07680 late competence protein ComER; Validated

Probab=97.15  E-value=0.0025  Score=60.73  Aligned_cols=97  Identities=15%  Similarity=0.204  Sum_probs=63.0

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCC--CcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPL--VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~--~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      |||+|||+ |.+|+.++..|...+.  ..++.++|.+....  ..+.+..  ..+..   +.+..++++++|+||++.  
T Consensus         1 m~I~iIG~-G~mG~ala~~L~~~g~~~~~~v~v~~r~~~~~--~~~~~~~--~g~~~---~~~~~~~~~~aDiVilav--   70 (273)
T PRK07680          1 MNIGFIGT-GNMGTILIEAFLESGAVKPSQLTITNRTPAKA--YHIKERY--PGIHV---AKTIEEVISQSDLIFICV--   70 (273)
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCCCcceEEEECCCHHHH--HHHHHHc--CCeEE---ECCHHHHHHhCCEEEEec--
Confidence            58999999 9999999999888773  25799999875221  2222211  12332   234567789999999985  


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCC
Q 017551           99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVN  141 (369)
Q Consensus        99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~  141 (369)
                      |              -..+.++.+.+..+. ++.+|+.++|++.
T Consensus        71 ~--------------p~~~~~vl~~l~~~l~~~~~iis~~ag~~  100 (273)
T PRK07680         71 K--------------PLDIYPLLQKLAPHLTDEHCLVSITSPIS  100 (273)
T ss_pred             C--------------HHHHHHHHHHHHhhcCCCCEEEEECCCCC
Confidence            1              111334445555443 5678888888774

>PRK05865 hypothetical protein; Provisional

Probab=97.13  E-value=0.0053  Score=67.45  Aligned_cols=104  Identities=17%  Similarity=0.139  Sum_probs=70.7

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEE-eCCCChhhhcCCCcEEEEcCCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQLENALTGMDLVIIPAGVP   99 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~-~~t~dl~~al~~ADiVii~ag~p   99 (369)
                      |||.|+||+|++|++++..|..++.  +|+++|.+....    +.. . ...+... ....++.++++++|+||.+|+..
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~--~Vv~l~R~~~~~----~~~-~-v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~   72 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGH--EVVGIARHRPDS----WPS-S-ADFIAADIRDATAVESAMTGADVVAHCAWVR   72 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC--EEEEEECCchhh----ccc-C-ceEEEeeCCCHHHHHHHHhCCCEEEECCCcc
Confidence            6899999999999999999999887  999999764211    100 0 0112211 11234567789999999998753


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 017551          100 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  140 (369)
Q Consensus       100 ~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv  140 (369)
                      . +      ....|+.....+++.+.+.... .++++|.+.
T Consensus        73 ~-~------~~~vNv~GT~nLLeAa~~~gvk-r~V~iSS~~  105 (854)
T PRK05865         73 G-R------NDHINIDGTANVLKAMAETGTG-RIVFTSSGH  105 (854)
T ss_pred             c-c------hHHHHHHHHHHHHHHHHHcCCC-eEEEECCcH
Confidence            2 1      3467888888888888776533 466666654

>PF11975 Glyco_hydro_4C: Family 4 glycosyl hydrolase C-terminal domain; InterPro: IPR022616 This domain is found primarily in bacterial family 4 glycosyl hydrolases

Probab=97.11  E-value=0.0018  Score=60.46  Aligned_cols=77  Identities=12%  Similarity=0.059  Sum_probs=49.9

Q ss_pred             CCchhhHHHHHHHHHHHHHHhccCCCCceeEE-EeecCCC---CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHH
Q 017551          240 AGSATLSMAYAAVKFADACLRGLRGDAGVVEC-AFVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLL  315 (369)
Q Consensus       240 ~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~-~~~~g~~---~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~  315 (369)
                      +|+..++     ..++++|.+|.+   .++.+ +.++|.+   |+|.+++|||+|+++|+.++.. ++|++...++++..
T Consensus       133 ~~~~~~a-----~~~i~~i~~~~~---~~~~vNv~N~G~I~nLp~davVEvp~~v~~~Gi~P~~~-g~lP~~~~~li~~~  203 (232)
T PF11975_consen  133 RGSGEYA-----EAAIEAIYNDKP---KRFVVNVPNNGAIPNLPDDAVVEVPCYVDGDGIHPVAV-GPLPPAIAGLIQQV  203 (232)
T ss_dssp             STTSCHH-----HHHHHHHHHSSE---EEEEEEEE-TTSSTTS-TTSEEEEEEEEETTEEEEB-S-B---HHHHHHHHHH
T ss_pred             ccccchH-----HHHHHHHhcCCC---eEEEEECCCCCccCCCCCCcEEEEEEEEcCCeeEeccC-CCCCHHHHHHHHHH
Confidence            3455555     345555677654   24445 4789987   8999999999999999999665 79999999988866


Q ss_pred             HHHHHHHHHh
Q 017551          316 HLCFQDWLGE  325 (369)
Q Consensus       316 ~~~i~~~l~~  325 (369)
                      ...-+-.++.
T Consensus       204 ~~~e~L~veA  213 (232)
T PF11975_consen  204 KAYERLTVEA  213 (232)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            6544433433

It is found in the C terminus. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 1UP4_A 1UP6_C 1UP7_E 1VJT_A 1U8X_X 1S6Y_A 3FEF_D 1OBB_A.

>PRK08655 prephenate dehydrogenase; Provisional

Probab=97.09  E-value=0.004  Score=63.67  Aligned_cols=66  Identities=23%  Similarity=0.324  Sum_probs=47.4

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      |||+||||+|.+|..++..|...+.  +|.++|.+....  .++....   .+..   ++++.+++.+||+||++.
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~--~V~v~~r~~~~~--~~~a~~~---gv~~---~~~~~e~~~~aDvVIlav   66 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGF--EVIVTGRDPKKG--KEVAKEL---GVEY---ANDNIDAAKDADIVIISV   66 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCC--EEEEEECChHHH--HHHHHHc---CCee---ccCHHHHhccCCEEEEec
Confidence            6899999669999999999999887  899999875221  1111111   1121   346678899999999984

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=97.08  E-value=0.0046  Score=61.38  Aligned_cols=111  Identities=21%  Similarity=0.237  Sum_probs=74.4

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcccCCCeEEEEe----CCCChhhhcCCCcEEE
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFL----GQPQLENALTGMDLVI   93 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~~~~v~~~~----~t~dl~~al~~ADiVi   93 (369)
                      +..++.|+||+|++|++++..|..++...+|.++|.... ...-.+.... ....++...    ...++..|++++ .|+
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~-~~~~v~~~~~D~~~~~~i~~a~~~~-~Vv   80 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGF-RSGRVTVILGDLLDANSISNAFQGA-VVV   80 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcc-cCCceeEEecchhhhhhhhhhccCc-eEE
Confidence            456999999999999999999999886679999999762 1111222211 122333221    134567899999 666


Q ss_pred             EcCCC--CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCe
Q 017551           94 IPAGV--PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNA  131 (369)
Q Consensus        94 i~ag~--p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a  131 (369)
                      +.+..  |...-..|......|+.-.+.+.+++.+.+=+-
T Consensus        81 h~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~  120 (361)
T KOG1430|consen   81 HCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKR  120 (361)
T ss_pred             EeccccCccccccchhhheeecchhHHHHHHHHHHhCCCE
Confidence            65433  332223477777889999999999998876433

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=97.08  E-value=0.0007  Score=61.80  Aligned_cols=109  Identities=20%  Similarity=0.200  Sum_probs=70.7

Q ss_pred             EEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHhhcccCCCeEEEE-eCCCChhhhcCCC--cEEEEcCCC
Q 017551           23 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGF-LGQPQLENALTGM--DLVIIPAGV   98 (369)
Q Consensus        23 I~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-~~g~~~dL~~~~~~~~v~~~-~~t~dl~~al~~A--DiVii~ag~   98 (369)
                      |.|+||+|++|+.++..|..++.  +++.+.... ......+.....   .+... ....++.+.+++.  |.||.+|+.
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~---~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~   75 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGH--EVIVLSRSSNSESFEEKKLNVE---FVIGDLTDKEQLEKLLEKANIDVVIHLAAF   75 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTT--EEEEEESCSTGGHHHHHHTTEE---EEESETTSHHHHHHHHHHHTESEEEEEBSS
T ss_pred             EEEEccCCHHHHHHHHHHHHcCC--ccccccccccccccccccceEE---EEEeeccccccccccccccCceEEEEeecc
Confidence            78999999999999999999987  655444444 222211111100   01110 1123455677777  999999987


Q ss_pred             CCC--CCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           99 PRK--PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        99 p~k--~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      +.-  ......+.+..|+...+.+.+.+.+... ..+++++
T Consensus        76 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~~i~~s  115 (236)
T PF01370_consen   76 SSNPESFEDPEEIIEANVQGTRNLLEAAREAGV-KRFIFLS  115 (236)
T ss_dssp             SSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT-SEEEEEE
T ss_pred             ccccccccccccccccccccccccccccccccc-ccccccc
Confidence            531  1134567788999999999999999877 3445444

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=97.06  E-value=0.0039  Score=60.46  Aligned_cols=67  Identities=25%  Similarity=0.260  Sum_probs=47.6

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      +||+|||+ |.+|..++..|...+...+|.++|.+.. ...+.++   .  .....   ..++.+++++||+||++.
T Consensus         7 ~~I~IIG~-G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~---g--~~~~~---~~~~~~~~~~aDvViiav   74 (307)
T PRK07502          7 DRVALIGI-GLIGSSLARAIRRLGLAGEIVGADRSAETRARAREL---G--LGDRV---TTSAAEAVKGADLVILCV   74 (307)
T ss_pred             cEEEEEee-CHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhC---C--CCcee---cCCHHHHhcCCCEEEECC
Confidence            59999998 9999999999998886568999999762 1111111   1  11111   234567889999999985

>COG0677 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=97.04  E-value=0.011  Score=59.02  Aligned_cols=132  Identities=16%  Similarity=0.225  Sum_probs=81.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch------hHH----HHhh----cccCCCeEEEEeCCCChhhh
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP------GVT----ADIS----HMDTGAVVRGFLGQPQLENA   85 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~------g~~----~dL~----~~~~~~~v~~~~~t~dl~~a   85 (369)
                      .++|+|||- |+||.++|..++.+|.  .+.-+|+|+..      |..    -++.    ......+++.   |+|. +.
T Consensus         9 ~~~I~ViGL-GYVGLPlA~~fA~~G~--~ViG~DIn~~~Vd~ln~G~~~i~e~~~~~~v~~~v~~g~lra---Ttd~-~~   81 (436)
T COG0677           9 SATIGVIGL-GYVGLPLAAAFASAGF--KVIGVDINQKKVDKLNRGESYIEEPDLDEVVKEAVESGKLRA---TTDP-EE   81 (436)
T ss_pred             ceEEEEEcc-ccccHHHHHHHHHcCC--ceEeEeCCHHHHHHHhCCcceeecCcHHHHHHHHHhcCCceE---ecCh-hh
Confidence            379999999 9999999999999998  99999999711      110    0111    1112345664   4565 56


Q ss_pred             cCCCcEEEEcCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe--cCCCCChhHHHHHHHHHhCCCCCCcE
Q 017551           86 LTGMDLVIIPAGVPRKPG-MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI--SNPVNSTVPIAAEVFKKAGTYDPKKL  162 (369)
Q Consensus        86 l~~ADiVii~ag~p~k~g-~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~--tNPv~~~t~i~ae~~~~~~~~~~~kv  162 (369)
                      ++.||++||+.-.|.+.. +.-       +..+..-++.|.++-.++-++++  |-|.+.+-.++--.+...+|+--..=
T Consensus        82 l~~~dv~iI~VPTPl~~~~~pD-------ls~v~~aa~sIa~~L~kG~LVIlEST~~PGTTe~v~~plle~~sgL~~~~D  154 (436)
T COG0677          82 LKECDVFIICVPTPLKKYREPD-------LSYVESAARSIAPVLKKGDLVILESTTPPGTTEEVVKPLLEERSGLKFGED  154 (436)
T ss_pred             cccCCEEEEEecCCcCCCCCCC-------hHHHHHHHHHHHHhcCCCCEEEEecCCCCCcHHHHHHHHHhhcCCCcccce
Confidence            789999999976665442 222       33445556666666544423333  78887766554333444465544333


Q ss_pred             EEe
Q 017551          163 LGV  165 (369)
Q Consensus       163 iG~  165 (369)
                      |++
T Consensus       155 f~l  157 (436)
T COG0677         155 FYL  157 (436)
T ss_pred             eeE
Confidence            333

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=97.03  E-value=0.0047  Score=59.12  Aligned_cols=109  Identities=11%  Similarity=0.123  Sum_probs=66.7

Q ss_pred             EEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhh----cCCCcEEEEcCCC
Q 017551           23 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENA----LTGMDLVIIPAGV   98 (369)
Q Consensus        23 I~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~a----l~~ADiVii~ag~   98 (369)
                      |.|+||+|++|++++..|..++. .+|+++|..........+........+..   ...++..    +.++|+||..|+.
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~~~~~~~~D~vvh~A~~   76 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGI-TDILVVDNLRDGHKFLNLADLVIADYIDK---EDFLDRLEKGAFGKIEAIFHQGAC   76 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCC-ceEEEEecCCCchhhhhhhheeeeccCcc---hhHHHHHHhhccCCCCEEEECccc
Confidence            57999999999999999998884 26888886542111111111000011110   1112222    2589999999986


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      +.............|+.....+.+.+.+...  .++++|
T Consensus        77 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~--~~v~~S  113 (314)
T TIGR02197        77 SDTTETDGEYMMENNYQYSKRLLDWCAEKGI--PFIYAS  113 (314)
T ss_pred             cCccccchHHHHHHHHHHHHHHHHHHHHhCC--cEEEEc
Confidence            5322234455678899999999998887653  355554

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN02688 pyrroline-5-carboxylate reductase

Probab=97.02  E-value=0.0037  Score=59.10  Aligned_cols=66  Identities=17%  Similarity=0.270  Sum_probs=46.3

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCC--CcEEEEE-eCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPL--VSVLHLY-DVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~--~~el~L~-D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      |||++||. |.+|+.++..|...++  ..+|+++ |.+..+  ...+...    .+..   .++..+++++||+||++.
T Consensus         1 ~kI~~IG~-G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~--~~~~~~~----g~~~---~~~~~e~~~~aDvVil~v   69 (266)
T PLN02688          1 FRVGFIGA-GKMAEAIARGLVASGVVPPSRISTADDSNPAR--RDVFQSL----GVKT---AASNTEVVKSSDVIILAV   69 (266)
T ss_pred             CeEEEECC-cHHHHHHHHHHHHCCCCCcceEEEEeCCCHHH--HHHHHHc----CCEE---eCChHHHHhcCCEEEEEE
Confidence            68999999 9999999999988774  4578888 765422  2222221    1222   234567789999999985

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=97.01  E-value=0.0049  Score=57.26  Aligned_cols=114  Identities=18%  Similarity=0.283  Sum_probs=68.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-------   86 (369)
                      .+++.|+||+|++|+.++..|++.+.  +|++++.++  ......++.+.  ..++..+. .-+|   +.+++       
T Consensus         7 ~~~vlItGasg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (262)
T PRK13394          7 GKTAVVTGAASGIGKEIALELARAGA--AVAIADLNQDGANAVADEINKA--GGKAIGVAMDVTNEDAVNAGIDKVAERF   82 (262)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHhc--CceEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999988  899999886  22233334332  22333221 1122   22222       


Q ss_pred             CCCcEEEEcCCCCCC-C--C---CCHHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEec
Q 017551           87 TGMDLVIIPAGVPRK-P--G---MTRDDLFNINAGI----VRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        87 ~~ADiVii~ag~p~k-~--g---~~r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~t  137 (369)
                      .+.|+||..+|.... +  .   ......+..|..-    .+.+.+.+.+.++.+.++++|
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~s  143 (262)
T PRK13394         83 GSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMG  143 (262)
T ss_pred             CCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEc
Confidence            348999999886421 1  1   1123445566655    556666663334445566655

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.01  E-value=0.0032  Score=53.77  Aligned_cols=105  Identities=18%  Similarity=0.194  Sum_probs=63.9

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      +..+|.|+|| |.+|..++..|...+. .+|.+++++..+  +.+|........+.... .+++.+.+.++|+||.+.+.
T Consensus        11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~-~~i~i~nRt~~r--a~~l~~~~~~~~~~~~~-~~~~~~~~~~~DivI~aT~~   85 (135)
T PF01488_consen   11 KGKRVLVIGA-GGAARAVAAALAALGA-KEITIVNRTPER--AEALAEEFGGVNIEAIP-LEDLEEALQEADIVINATPS   85 (135)
T ss_dssp             TTSEEEEESS-SHHHHHHHHHHHHTTS-SEEEEEESSHHH--HHHHHHHHTGCSEEEEE-GGGHCHHHHTESEEEE-SST
T ss_pred             CCCEEEEECC-HHHHHHHHHHHHHcCC-CEEEEEECCHHH--HHHHHHHcCccccceee-HHHHHHHHhhCCeEEEecCC
Confidence            4569999999 9999999999998874 479999987522  22232211223444433 35677789999999998654


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCChh
Q 017551           99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTV  144 (369)
Q Consensus        99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t  144 (369)
                      +..+             +-.+   .+....+ ..+++-.++|-|+=.
T Consensus        86 ~~~~-------------i~~~---~~~~~~~~~~~v~Dla~Pr~i~~  116 (135)
T PF01488_consen   86 GMPI-------------ITEE---MLKKASKKLRLVIDLAVPRDIDP  116 (135)
T ss_dssp             TSTS-------------STHH---HHTTTCHHCSEEEES-SS-SB-T
T ss_pred             CCcc-------------cCHH---HHHHHHhhhhceeccccCCCCCh
Confidence            4321             0111   1111111 247888899988754

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=97.01  E-value=0.0048  Score=58.98  Aligned_cols=110  Identities=16%  Similarity=0.083  Sum_probs=68.5

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch-h-HHHHhhcccCCCeEEEEe-C---CCChhhhcC--CCcEEE
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-G-VTADISHMDTGAVVRGFL-G---QPQLENALT--GMDLVI   93 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~-g-~~~dL~~~~~~~~v~~~~-~---t~dl~~al~--~ADiVi   93 (369)
                      ||.|+||+|++|+.++..|..++.  +++++|..... . ....+.+.   ..+..+. .   ..++.++++  +.|+||
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~--~V~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~d~vv   75 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGH--EVVVLDNLSNGSPEALKRGERI---TRVTFVEGDLRDRELLDRLFEEHKIDAVI   75 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCC--eEEEEeCCCccchhhhhhhccc---cceEEEECCCCCHHHHHHHHHhCCCcEEE
Confidence            689999999999999999998887  88888864311 1 11111111   1222221 1   122334443  699999


Q ss_pred             EcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           94 IPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        94 i~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ..+|....+  .....+.+..|+.....+++.+.++.... ++++|
T Consensus        76 ~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~v~~s  120 (328)
T TIGR01179        76 HFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKK-FIFSS  120 (328)
T ss_pred             ECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCE-EEEec
Confidence            999864322  12334556788988899998888765444 33443

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK08267 short chain dehydrogenase; Provisional

Probab=97.01  E-value=0.0067  Score=56.62  Aligned_cols=112  Identities=23%  Similarity=0.286  Sum_probs=65.3

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHhhcccCCCeEEEE----eCCCChhhhc--------
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGF----LGQPQLENAL--------   86 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~~~~~~v~~~----~~t~dl~~al--------   86 (369)
                      +++.|+||+|++|+.++..|+..+.  +|+++|.+...  ....++..    ..+..+    +...++.+++        
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~~~   75 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGW--RVGAYDINEAGLAALAAELGA----GNAWTGALDVTDRAAWDAALADFAAATG   75 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHhcC----CceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4699999999999999999999887  89999987521  11122211    112111    1112222333        


Q ss_pred             CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhh---hCCCeEEEEecC
Q 017551           87 TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAK---CCPNATVNLISN  138 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~g---~~---r~~~~~~N~~i~~~i~~~i~~---~~p~a~viv~tN  138 (369)
                      ...|+||..+|......   .+   ....+..|+.....+.+.+..   ..+.+.+++++-
T Consensus        76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS  136 (260)
T PRK08267         76 GRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSS  136 (260)
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Confidence            34599999998754221   12   234566776655555555432   234555666654

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=97.01  E-value=0.0029  Score=60.84  Aligned_cols=63  Identities=16%  Similarity=0.256  Sum_probs=46.4

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      ||+|||. |.+|+.++..|+..+.  +|.+||.+...  ...+.+..  .  ..   .++..+++++||+||++.
T Consensus         1 ~IgvIG~-G~mG~~iA~~l~~~G~--~V~~~dr~~~~--~~~~~~~g--~--~~---~~~~~~~~~~aDivi~~v   63 (291)
T TIGR01505         1 KVGFIGL-GIMGSPMSINLAKAGY--QLHVTTIGPEV--ADELLAAG--A--VT---AETARQVTEQADVIFTMV   63 (291)
T ss_pred             CEEEEEe-cHHHHHHHHHHHHCCC--eEEEEcCCHHH--HHHHHHCC--C--cc---cCCHHHHHhcCCEEEEec
Confidence            6999999 9999999999999887  99999987522  12222211  1  11   235678899999999984

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=97.00  E-value=0.0028  Score=53.78  Aligned_cols=103  Identities=23%  Similarity=0.270  Sum_probs=57.6

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      ...+||.|||+ |.+|.+|+..|...++  +|.-+-... ..-...+.+..  +....    .++.+.+++||+++++. 
T Consensus         8 ~~~l~I~iIGa-GrVG~~La~aL~~ag~--~v~~v~srs-~~sa~~a~~~~--~~~~~----~~~~~~~~~aDlv~iav-   76 (127)
T PF10727_consen    8 AARLKIGIIGA-GRVGTALARALARAGH--EVVGVYSRS-PASAERAAAFI--GAGAI----LDLEEILRDADLVFIAV-   76 (127)
T ss_dssp             ----EEEEECT-SCCCCHHHHHHHHTTS--EEEEESSCH-H-HHHHHHC----TT---------TTGGGCC-SEEEE-S-
T ss_pred             CCccEEEEECC-CHHHHHHHHHHHHCCC--eEEEEEeCC-ccccccccccc--ccccc----cccccccccCCEEEEEe-
Confidence            34589999999 9999999999999997  665554432 22222233322  11221    23467889999999994 


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhh--C-CCeEEEEe--cCCCCChhHH
Q 017551           98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKC--C-PNATVNLI--SNPVNSTVPI  146 (369)
Q Consensus        98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~--~-p~a~viv~--tNPv~~~t~i  146 (369)
                          |+           ..+.++++++..+  . |+.+|+=.  +-+++++.++
T Consensus        77 ----pD-----------daI~~va~~La~~~~~~~g~iVvHtSGa~~~~vL~p~  115 (127)
T PF10727_consen   77 ----PD-----------DAIAEVAEQLAQYGAWRPGQIVVHTSGALGSDVLAPA  115 (127)
T ss_dssp             -----C-----------CHHHHHHHHHHCC--S-TT-EEEES-SS--GGGGHHH
T ss_pred             ----ch-----------HHHHHHHHHHHHhccCCCCcEEEECCCCChHHhhhhH
Confidence                12           1356778888776  3 44444333  3566777664

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=96.98  E-value=0.013  Score=55.81  Aligned_cols=118  Identities=18%  Similarity=0.177  Sum_probs=75.5

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe----CCCChhh------
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL----GQPQLEN------   84 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~----~t~dl~~------   84 (369)
                      ..+.+.+.|+|||++||..+|..|+.++.  +|+|+.+++  +...+.+|.+.. ...+....    .+++.+.      
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~--~liLvaR~~~kL~~la~~l~~~~-~v~v~vi~~DLs~~~~~~~l~~~l~   79 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGY--NLILVARREDKLEALAKELEDKT-GVEVEVIPADLSDPEALERLEDELK   79 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCcHHHHHHHHHHHHHhh-CceEEEEECcCCChhHHHHHHHHHH
Confidence            34567999999999999999999999999  999999987  566677777543 12332221    1122211      


Q ss_pred             -hcCCCcEEEEcCCCCCCCC------CCHHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEec
Q 017551           85 -ALTGMDLVIIPAGVPRKPG------MTRDDLFNINAGIVRTLCEGIAKC---CPNATVNLIS  137 (369)
Q Consensus        85 -al~~ADiVii~ag~p~k~g------~~r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~t  137 (369)
                       ..-..|+.|..||...-..      .+-.+++.-|+--...+...+-..   .-.+.||+++
T Consensus        80 ~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~  142 (265)
T COG0300          80 ERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIG  142 (265)
T ss_pred             hcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEe
Confidence             1126899999999754221      123556677765555554444432   2245566664

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.97  E-value=0.018  Score=53.04  Aligned_cols=76  Identities=22%  Similarity=0.302  Sum_probs=49.8

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEeC-CC---Chhhhc------
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLG-QP---QLENAL------   86 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~~-t~---dl~~al------   86 (369)
                      +.++|.|+||+|++|+.++..|++.+.  +|++++.+..  .....++.+   ..++..+.+ -.   ++..++      
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   78 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGA--RVVVTDRNEEAAERVAAEILA---GGRAIAVAADVSDEADVEAAVAAALER   78 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            346999999999999999999999887  8999999862  222233332   122332221 11   222222      


Q ss_pred             -CCCcEEEEcCCCC
Q 017551           87 -TGMDLVIIPAGVP   99 (369)
Q Consensus        87 -~~ADiVii~ag~p   99 (369)
                       ...|+||..+|..
T Consensus        79 ~~~~d~vi~~ag~~   92 (251)
T PRK07231         79 FGSVDILVNNAGTT   92 (251)
T ss_pred             hCCCCEEEECCCCC
Confidence             3579999999864

>PRK07634 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.97  E-value=0.01  Score=55.27  Aligned_cols=70  Identities=10%  Similarity=0.190  Sum_probs=46.5

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCC--CCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINP--LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~--~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      +.+||+|||+ |.+|+.++..+...+  ...+++.++.+.. ....++.+..   .+..   ++|+++.++++|+||++.
T Consensus         3 ~~~kI~iIG~-G~mg~ala~~l~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~---~~~~---~~~~~~~~~~~DiViiav   74 (245)
T PRK07634          3 KKHRILFIGA-GRMAEAIFSGLLKTSKEYIEEIIVSNRSNV-EKLDQLQARY---NVST---TTDWKQHVTSVDTIVLAM   74 (245)
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhCCCCCcCeEEEECCCCH-HHHHHHHHHc---CcEE---eCChHHHHhcCCEEEEec
Confidence            4579999999 999999999888765  2445778876431 1122233211   1222   245677889999999983

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=96.97  E-value=0.004  Score=59.92  Aligned_cols=64  Identities=17%  Similarity=0.243  Sum_probs=47.0

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      +||+|||. |.+|+.++..++..+.  +|.+||.+.....  .+...    .+..   .+++.+++++||+||++.
T Consensus         3 ~~IgviG~-G~mG~~~a~~l~~~g~--~v~~~d~~~~~~~--~~~~~----g~~~---~~~~~e~~~~~d~vi~~v   66 (296)
T PRK11559          3 MKVGFIGL-GIMGKPMSKNLLKAGY--SLVVYDRNPEAVA--EVIAA----GAET---ASTAKAVAEQCDVIITML   66 (296)
T ss_pred             ceEEEEcc-CHHHHHHHHHHHHCCC--eEEEEcCCHHHHH--HHHHC----CCee---cCCHHHHHhcCCEEEEeC
Confidence            58999999 9999999999998887  8999998762211  12211    1121   345678889999999984

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=96.96  E-value=0.0039  Score=62.41  Aligned_cols=53  Identities=19%  Similarity=0.354  Sum_probs=43.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      .+||+||||.|.+|..++..|...++  +|.++|.+..                      ++.++++++||+||++.
T Consensus        98 ~~~I~IiGG~GlmG~slA~~l~~~G~--~V~~~d~~~~----------------------~~~~~~~~~aDlVilav  150 (374)
T PRK11199         98 LRPVVIVGGKGQLGRLFAKMLTLSGY--QVRILEQDDW----------------------DRAEDILADAGMVIVSV  150 (374)
T ss_pred             cceEEEEcCCChhhHHHHHHHHHCCC--eEEEeCCCcc----------------------hhHHHHHhcCCEEEEeC
Confidence            37999999559999999999999987  8999997520                      13457789999999984

>PRK06545 prephenate dehydrogenase; Validated

Probab=96.94  E-value=0.0064  Score=60.46  Aligned_cols=67  Identities=21%  Similarity=0.287  Sum_probs=46.7

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhH-HHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV-TADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~-~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      .||+|||. |.||.+++..|+..++  ++.++|.+..... ...... .   .+..  .++++.+++++||+||++.
T Consensus         1 ~~I~iIG~-GliG~siA~~L~~~G~--~v~i~~~~~~~~~~~~a~~~-~---~~~~--~~~~~~~~~~~aDlVilav   68 (359)
T PRK06545          1 RTVLIVGL-GLIGGSLALAIKAAGP--DVFIIGYDPSAAQLARALGF-G---VIDE--LAADLQRAAAEADLIVLAV   68 (359)
T ss_pred             CeEEEEEe-CHHHHHHHHHHHhcCC--CeEEEEeCCCHHHHHHHhcC-C---CCcc--cccCHHHHhcCCCEEEEeC
Confidence            37999999 9999999999999887  7788888762211 111111 0   1111  1356778899999999984

>PRK12320 hypothetical protein; Provisional

Probab=96.93  E-value=0.0058  Score=65.72  Aligned_cols=101  Identities=14%  Similarity=0.095  Sum_probs=65.7

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  100 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p~  100 (369)
                      |||.|+||+|++|++++..|...++  +|..+|.....     +.+.. ...+........+.++++++|+||..++...
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~--~Vi~ldr~~~~-----~~~~~-ve~v~~Dl~d~~l~~al~~~D~VIHLAa~~~   72 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGH--TVSGIAQHPHD-----ALDPR-VDYVCASLRNPVLQELAGEADAVIHLAPVDT   72 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC--EEEEEeCChhh-----cccCC-ceEEEccCCCHHHHHHhcCCCEEEEcCccCc
Confidence            6899999999999999999998887  99999975421     11100 0111111101124566789999999986531


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551          101 KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus       101 k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                        ..    ....|+....++++.+++...  .++++|
T Consensus        73 --~~----~~~vNv~Gt~nLleAA~~~Gv--RiV~~S  101 (699)
T PRK12320         73 --SA----PGGVGITGLAHVANAAARAGA--RLLFVS  101 (699)
T ss_pred             --cc----hhhHHHHHHHHHHHHHHHcCC--eEEEEE
Confidence              11    124688888888888877653  455554

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.93  E-value=0.0052  Score=58.17  Aligned_cols=95  Identities=14%  Similarity=0.158  Sum_probs=60.1

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCC-CcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~-~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      .+||+|||+ |.+|+.++..+...+. ..++.++|.+...  ...+.+..   .+..   +++..+.++++|+||++.  
T Consensus         2 mm~I~iIG~-G~mG~~la~~l~~~g~~~~~v~v~~r~~~~--~~~~~~~~---g~~~---~~~~~~~~~~advVil~v--   70 (267)
T PRK11880          2 MKKIGFIGG-GNMASAIIGGLLASGVPAKDIIVSDPSPEK--RAALAEEY---GVRA---ATDNQEAAQEADVVVLAV--   70 (267)
T ss_pred             CCEEEEEec-hHHHHHHHHHHHhCCCCcceEEEEcCCHHH--HHHHHHhc---CCee---cCChHHHHhcCCEEEEEc--
Confidence            368999999 9999999999888762 2478999987522  11222210   1122   234566789999999984  


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 017551           99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  140 (369)
Q Consensus        99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv  140 (369)
                      |              ...+.++.+.+..+. +..|+..+|-+
T Consensus        71 ~--------------~~~~~~v~~~l~~~~-~~~vvs~~~gi   97 (267)
T PRK11880         71 K--------------PQVMEEVLSELKGQL-DKLVVSIAAGV   97 (267)
T ss_pred             C--------------HHHHHHHHHHHHhhc-CCEEEEecCCC
Confidence            1              122445555555443 45666677755

>PLN02686 cinnamoyl-CoA reductase

Probab=96.91  E-value=0.0043  Score=61.72  Aligned_cols=108  Identities=10%  Similarity=0.123  Sum_probs=67.6

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch-hHHHHhhcc---c-CCCeEEEEe----CCCChhhhcCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHM---D-TGAVVRGFL----GQPQLENALTG   88 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~-g~~~dL~~~---~-~~~~v~~~~----~t~dl~~al~~   88 (369)
                      .+.++|.|+||+|++|++++..|+..+.  +|+++..+... ....++...   . ....+..+.    ...++.+++++
T Consensus        51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~--~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~  128 (367)
T PLN02686         51 AEARLVCVTGGVSFLGLAIVDRLLRHGY--SVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDG  128 (367)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHh
Confidence            4567999999999999999999999987  88776554311 111122110   0 001223221    12235677899


Q ss_pred             CcEEEEcCCCCCCCCC--CHHHHHHHHHHHHHHHHHHHhhh
Q 017551           89 MDLVIIPAGVPRKPGM--TRDDLFNINAGIVRTLCEGIAKC  127 (369)
Q Consensus        89 ADiVii~ag~p~k~g~--~r~~~~~~N~~i~~~i~~~i~~~  127 (369)
                      +|.|+.+++.....+.  ....+...|+.....+.+.+.+.
T Consensus       129 ~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~  169 (367)
T PLN02686        129 CAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRT  169 (367)
T ss_pred             ccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhc
Confidence            9999998875322221  12344567888888999988765

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=96.90  E-value=0.0091  Score=57.52  Aligned_cols=65  Identities=20%  Similarity=0.258  Sum_probs=48.8

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      +||++||- |.+|++++..|...++  +++.||.+..+. +..+....  .  ..   ..+..++.++||+||..-
T Consensus         1 ~kIafIGL-G~MG~pmA~~L~~aG~--~v~v~~r~~~ka-~~~~~~~G--a--~~---a~s~~eaa~~aDvVitmv   65 (286)
T COG2084           1 MKIAFIGL-GIMGSPMAANLLKAGH--EVTVYNRTPEKA-AELLAAAG--A--TV---AASPAEAAAEADVVITML   65 (286)
T ss_pred             CeEEEEcC-chhhHHHHHHHHHCCC--EEEEEeCChhhh-hHHHHHcC--C--cc---cCCHHHHHHhCCEEEEec
Confidence            58999999 9999999999999998  999999986443 22233211  1  11   123468999999999983

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=96.90  E-value=0.011  Score=59.29  Aligned_cols=114  Identities=18%  Similarity=0.143  Sum_probs=68.3

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchh----HHHHhhcccCCC-eEEEE-eCCCChhhhcC----
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG----VTADISHMDTGA-VVRGF-LGQPQLENALT----   87 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g----~~~dL~~~~~~~-~v~~~-~~t~dl~~al~----   87 (369)
                      .+.+||.|+||+|++|+.++..|+.++.  +|++++.+....    ...++....... .+... +...++.++++    
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~  135 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGY--NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGD  135 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCC
Confidence            3457999999999999999999998887  899999865211    111111111011 11211 11233555666    


Q ss_pred             CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           88 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        88 ~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ++|+||.+++.+.. +  ..+....|......+.+.+++..-.- ++++|
T Consensus       136 ~~D~Vi~~aa~~~~-~--~~~~~~vn~~~~~~ll~aa~~~gv~r-~V~iS  181 (390)
T PLN02657        136 PVDVVVSCLASRTG-G--VKDSWKIDYQATKNSLDAGREVGAKH-FVLLS  181 (390)
T ss_pred             CCcEEEECCccCCC-C--CccchhhHHHHHHHHHHHHHHcCCCE-EEEEe
Confidence            59999998764321 1  11234567777778888887765443 44444

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=96.89  E-value=0.024  Score=52.69  Aligned_cols=117  Identities=13%  Similarity=0.169  Sum_probs=67.6

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------cC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT   87 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l~   87 (369)
                      ++|.|+||+|++|+.++..|++.+.  +|+++|.+.  ......++.+.....++..+. ..++   ...+       +.
T Consensus         3 k~ilItG~~~~IG~~la~~l~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   80 (259)
T PRK12384          3 QVAVVIGGGQTLGAFLCHGLAEEGY--RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFG   80 (259)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4799999999999999999999887  999999875  222222333211111222221 1122   2222       24


Q ss_pred             CCcEEEEcCCCCCCC---CCCHH---HHHHHHHHH----HHHHHHHHhhhCCCeEEEEecCC
Q 017551           88 GMDLVIIPAGVPRKP---GMTRD---DLFNINAGI----VRTLCEGIAKCCPNATVNLISNP  139 (369)
Q Consensus        88 ~ADiVii~ag~p~k~---g~~r~---~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNP  139 (369)
                      ..|+||..+|.+...   ..+..   ..+..|+.-    .+.+.+.+.+..+++.++++|..
T Consensus        81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~  142 (259)
T PRK12384         81 RVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSK  142 (259)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCc
Confidence            679999999875422   12222   234455543    45555555544445667776653

>PRK07102 short chain dehydrogenase; Provisional

Probab=96.88  E-value=0.019  Score=52.96  Aligned_cols=115  Identities=19%  Similarity=0.063  Sum_probs=67.5

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEeC-CC---Chhhhc----CCCc
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLG-QP---QLENAL----TGMD   90 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~~-t~---dl~~al----~~AD   90 (369)
                      ++|.|+||+|++|..++..|+..+.  +|++.|.+..  .....++.... ..++..+.. -+   ++++.+    +..|
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d   78 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGA--RLYLAARDVERLERLADDLRARG-AVAVSTHELDILDTASHAAFLDSLPALPD   78 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCC--EEEEEeCCHHHHHHHHHHHHHhc-CCeEEEEecCCCChHHHHHHHHHHhhcCC
Confidence            5899999999999999999999887  8999998762  22233333211 123333211 12   222222    3459


Q ss_pred             EEEEcCCCCCC---CCCCHH---HHHHHHHHHHHHHHHHHhhhC---CCeEEEEecC
Q 017551           91 LVIIPAGVPRK---PGMTRD---DLFNINAGIVRTLCEGIAKCC---PNATVNLISN  138 (369)
Q Consensus        91 iVii~ag~p~k---~g~~r~---~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tN  138 (369)
                      +||..+|....   .+.+..   +.+..|..-...+.+.+..+.   ..+.++++|-
T Consensus        79 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS  135 (243)
T PRK07102         79 IVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISS  135 (243)
T ss_pred             EEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence            99998875321   122332   345667666555655554432   3455666653

>PRK07806 short chain dehydrogenase; Provisional

Probab=96.88  E-value=0.0065  Score=56.12  Aligned_cols=114  Identities=17%  Similarity=0.219  Sum_probs=65.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc---hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL-GQPQ---LENAL------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~---~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al------   86 (369)
                      .++|.|+||+|++|+.++..|+..+.  +|++++.+..   .....++....  .++..+. .-+|   +..++      
T Consensus         6 ~k~vlItGasggiG~~l~~~l~~~G~--~V~~~~r~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (248)
T PRK07806          6 GKTALVTGSSRGIGADTAKILAGAGA--HVVVNYRQKAPRANKVVAEIEAAG--GRASAVGADLTDEESVAALMDTAREE   81 (248)
T ss_pred             CcEEEEECCCCcHHHHHHHHHHHCCC--EEEEEeCCchHhHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            35899999999999999999998887  8888887641   12222333211  2222221 1122   22222      


Q ss_pred             -CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEec
Q 017551           87 -TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS  137 (369)
Q Consensus        87 -~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t  137 (369)
                       .+.|+||..+|............+..|......+++.+..+. ..+.++++|
T Consensus        82 ~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~is  134 (248)
T PRK07806         82 FGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVT  134 (248)
T ss_pred             CCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEe
Confidence             368999998875422122222334556665666666666553 234565554

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=96.88  E-value=0.0059  Score=60.15  Aligned_cols=91  Identities=16%  Similarity=0.256  Sum_probs=59.6

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      +.++|+|||. |.+|+.++..|...+.  +|+.||.+....  .+.        +. +  ..++.+++++||+|++..  
T Consensus       145 ~g~~VgIIG~-G~IG~~vA~~L~~~G~--~V~~~d~~~~~~--~~~--------~~-~--~~~l~ell~~aDiVil~l--  206 (330)
T PRK12480        145 KNMTVAIIGT-GRIGAATAKIYAGFGA--TITAYDAYPNKD--LDF--------LT-Y--KDSVKEAIKDADIISLHV--  206 (330)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEeCChhHh--hhh--------hh-c--cCCHHHHHhcCCEEEEeC--
Confidence            4579999999 9999999999987776  999999875210  000        11 1  346789999999999984  


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 017551           99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      |..         ..+..++.  ...+....|++++|+++-
T Consensus       207 P~t---------~~t~~li~--~~~l~~mk~gavlIN~aR  235 (330)
T PRK12480        207 PAN---------KESYHLFD--KAMFDHVKKGAILVNAAR  235 (330)
T ss_pred             CCc---------HHHHHHHh--HHHHhcCCCCcEEEEcCC
Confidence            321         11112221  122333347888888864

>PRK07326 short chain dehydrogenase; Provisional

Probab=96.85  E-value=0.014  Score=53.47  Aligned_cols=115  Identities=18%  Similarity=0.193  Sum_probs=66.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEeC-CC---Chhhhc-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLG-QP---QLENAL-------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~~-t~---dl~~al-------   86 (369)
                      .++|.|+||+|++|+.++..|+..+.  +|++++.+..  .....++...   ..+..+.+ -+   ++.+++       
T Consensus         6 ~~~ilItGatg~iG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (237)
T PRK07326          6 GKVALITGGSKGIGFAIAEALLAEGY--KVAITARDQKELEEAAAELNNK---GNVLGLAADVRDEADVQRAVDAIVAAF   80 (237)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCC--EEEEeeCCHHHHHHHHHHHhcc---CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            35899999999999999999998877  8999998762  2222333321   12222211 12   222222       


Q ss_pred             CCCcEEEEcCCCCCCC---CCCHH---HHHHHHHHHHHHHHHHHhhh--CCCeEEEEecCC
Q 017551           87 TGMDLVIIPAGVPRKP---GMTRD---DLFNINAGIVRTLCEGIAKC--CPNATVNLISNP  139 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~---g~~r~---~~~~~N~~i~~~i~~~i~~~--~p~a~viv~tNP  139 (369)
                      .+.|+||..+|.....   ..+..   +.+..|+.....+.+.+.+.  ...+.++++|..
T Consensus        81 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~  141 (237)
T PRK07326         81 GGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSL  141 (237)
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECCh
Confidence            3799999998764321   12222   33555655554544444332  234556666643

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=96.84  E-value=0.0039  Score=53.62  Aligned_cols=120  Identities=18%  Similarity=0.205  Sum_probs=71.9

Q ss_pred             EEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHH---h--hcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           23 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTAD---I--SHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        23 I~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~d---L--~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      |+|+|+ |.+|+.++..|.+.+.  ++.|++... ......   +  .+......+.......+..+..+.+|+||++.-
T Consensus         1 I~I~G~-GaiG~~~a~~L~~~g~--~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~viv~vK   76 (151)
T PF02558_consen    1 ILIIGA-GAIGSLYAARLAQAGH--DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAPSADAGPYDLVIVAVK   76 (151)
T ss_dssp             EEEEST-SHHHHHHHHHHHHTTC--EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSHGHHHSTESEEEE-SS
T ss_pred             CEEECc-CHHHHHHHHHHHHCCC--ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcchhccCCCcEEEEEec
Confidence            789999 9999999999999888  999999865 211111   1  111100111211111222246799999999852


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhc
Q 017551           98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLD  169 (369)
Q Consensus        98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld  169 (369)
                      ..                -..+..+.++.+. |+..++.+-|=++..-     .+.+.  +|+.+|++- ++..
T Consensus        77 a~----------------~~~~~l~~l~~~~~~~t~iv~~qNG~g~~~-----~l~~~--~~~~~v~~g~~~~g  127 (151)
T PF02558_consen   77 AY----------------QLEQALQSLKPYLDPNTTIVSLQNGMGNEE-----VLAEY--FPRPRVLGGVTTIG  127 (151)
T ss_dssp             GG----------------GHHHHHHHHCTGEETTEEEEEESSSSSHHH-----HHHCH--STGSGEEEEEEEEE
T ss_pred             cc----------------chHHHHHHHhhccCCCcEEEEEeCCCCcHH-----HHHHH--cCCCcEEEEEEeEe
Confidence            11                1234556677765 6778888888777653     23333  566677644 5533

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>PRK12829 short chain dehydrogenase; Provisional

Probab=96.83  E-value=0.014  Score=54.21  Aligned_cols=36  Identities=31%  Similarity=0.523  Sum_probs=32.6

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      +.++|.|+||+|++|+.++..|+.++.  +|++++.+.
T Consensus        10 ~~~~vlItGa~g~iG~~~a~~L~~~g~--~V~~~~r~~   45 (264)
T PRK12829         10 DGLRVLVTGGASGIGRAIAEAFAEAGA--RVHVCDVSE   45 (264)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCC--EEEEEeCCH
Confidence            457999999999999999999999988  899999875

>PRK08507 prephenate dehydrogenase; Validated

Probab=96.83  E-value=0.009  Score=57.02  Aligned_cols=66  Identities=21%  Similarity=0.301  Sum_probs=44.1

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      |||+|||. |.+|+.++..|...++..+|+.+|.+....  ..+.....   ...   ..++.++ .+||+||++.
T Consensus         1 m~I~iIG~-G~mG~sla~~l~~~g~~~~v~~~d~~~~~~--~~~~~~g~---~~~---~~~~~~~-~~aD~Vilav   66 (275)
T PRK08507          1 MKIGIIGL-GLMGGSLGLALKEKGLISKVYGYDHNELHL--KKALELGL---VDE---IVSFEEL-KKCDVIFLAI   66 (275)
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCCEEEEEcCCHHHH--HHHHHCCC---Ccc---cCCHHHH-hcCCEEEEeC
Confidence            58999999 999999999999888655789999875221  11111111   111   1234444 4699999984

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=96.82  E-value=0.016  Score=53.32  Aligned_cols=115  Identities=17%  Similarity=0.203  Sum_probs=66.3

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEeC-CCC---hhhhc-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLG-QPQ---LENAL-------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~~-t~d---l~~al-------   86 (369)
                      .++|.|+||+|++|+.++..|+..+.  +|+++|.+..  .....++....  .++..+.. -+|   +++++       
T Consensus         3 ~~~ilItGas~~iG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~   78 (250)
T TIGR03206         3 DKTAIVTGGGGGIGGATCRRFAEEGA--KVAVFDLNREAAEKVAADIRAKG--GNAQAFACDITDRDSVDTAVAAAEQAL   78 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999887  8999998762  22223333221  22332211 122   22222       


Q ss_pred             CCCcEEEEcCCCCCCCC---CCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 017551           87 TGMDLVIIPAGVPRKPG---MTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  138 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~g---~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN  138 (369)
                      ...|+||..+|......   .+.   ...+..|+.....+.+.+..+   .+...+++++.
T Consensus        79 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss  139 (250)
T TIGR03206        79 GPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIAS  139 (250)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECc
Confidence            35899999988632211   222   233566766555555544321   23344555553

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK12828 short chain dehydrogenase; Provisional

Probab=96.80  E-value=0.011  Score=53.93  Aligned_cols=116  Identities=16%  Similarity=0.138  Sum_probs=64.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHhhcccCCCeEEEE-eCCCChhhhc-------CCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGF-LGQPQLENAL-------TGM   89 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~~~~~~v~~~-~~t~dl~~al-------~~A   89 (369)
                      .++|.|+||+|++|+.++..|++++.  +|+++|.+..+  ....++..... ..+... ....++.+++       .+.
T Consensus         7 ~k~vlItGatg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (239)
T PRK12828          7 GKVVAITGGFGGLGRATAAWLAARGA--RVALIGRGAAPLSQTLPGVPADAL-RIGGIDLVDPQAARRAVDEVNRQFGRL   83 (239)
T ss_pred             CCEEEEECCCCcHhHHHHHHHHHCCC--eEEEEeCChHhHHHHHHHHhhcCc-eEEEeecCCHHHHHHHHHHHHHHhCCc
Confidence            46899999999999999999999887  89999987621  22223332111 111111 1112222223       368


Q ss_pred             cEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 017551           90 DLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  138 (369)
Q Consensus        90 DiVii~ag~p~k~---g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN  138 (369)
                      |+||..+|.....   ..+.   .+.+..|......+.+.+.+.   .+...++++|.
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS  141 (239)
T PRK12828         84 DALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGA  141 (239)
T ss_pred             CEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECc
Confidence            9999998753211   1122   233455655555555544322   23445665553

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=96.80  E-value=0.011  Score=54.83  Aligned_cols=114  Identities=14%  Similarity=0.243  Sum_probs=65.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-C---CCChhhhc-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-G---QPQLENAL-------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~---t~dl~~al-------   86 (369)
                      .++|.|+||+|++|+.++..|...+.  +|+++|.+..  .....++...  ..++..+. .   ..++.+++       
T Consensus         4 ~~~vlItG~sg~iG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   79 (258)
T PRK12429          4 GKVALVTGAASGIGLEIALALAKEGA--KVVIADLNDEAAAAAAEALQKA--GGKAIGVAMDVTDEEAINAGIDYAVETF   79 (258)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35899999999999999999998887  9999998762  2233333321  12222221 1   11222222       


Q ss_pred             CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 017551           87 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      .+.|+||..+|.....   ..+.   ...+..|..-    .+.+.+.+.+... ..++++|.
T Consensus        80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~iv~iss  140 (258)
T PRK12429         80 GGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGG-GRIINMAS  140 (258)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCC-eEEEEEcc
Confidence            3689999998864321   1111   2234445444    5556666655443 34555543

>PLN02253 xanthoxin dehydrogenase

Probab=96.80  E-value=0.013  Score=55.42  Aligned_cols=114  Identities=18%  Similarity=0.259  Sum_probs=65.3

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT------   87 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~------   87 (369)
                      .+++.|+||+|++|+.++..|+..|.  +|+++|.+..  .....++..   ..++..+. .-+|   ..++++      
T Consensus        18 ~k~~lItGas~gIG~~la~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   92 (280)
T PLN02253         18 GKVALVTGGATGIGESIVRLFHKHGA--KVCIVDLQDDLGQNVCDSLGG---EPNVCFFHCDVTVEDDVSRAVDFTVDKF   92 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhcC---CCceEEEEeecCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999887  9999998752  222222321   12222211 1122   223333      


Q ss_pred             -CCcEEEEcCCCCCCC-C----CC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 017551           88 -GMDLVIIPAGVPRKP-G----MT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  138 (369)
Q Consensus        88 -~ADiVii~ag~p~k~-g----~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN  138 (369)
                       ..|++|..||....+ +    .+   ....+..|+.-...+.+.+...   ...+.+++++.
T Consensus        93 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS  155 (280)
T PLN02253         93 GTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCS  155 (280)
T ss_pred             CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecC
Confidence             689999999875321 1    12   2344566655444444433322   13455666653

>PTZ00142 6-phosphogluconate dehydrogenase; Provisional

Probab=96.79  E-value=0.0053  Score=63.26  Aligned_cols=97  Identities=16%  Similarity=0.191  Sum_probs=61.7

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhccc--CCCeEEEEeCCCChhhhcC---CCcEEEEc
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD--TGAVVRGFLGQPQLENALT---GMDLVIIP   95 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~--~~~~v~~~~~t~dl~~al~---~ADiVii~   95 (369)
                      .+|+|||. |.+|+++|..|+.+++  +|.+||++...  +.++....  ....+..   ..+++++++   ++|+|++.
T Consensus         2 ~~IgvIGL-G~MG~~lA~nL~~~G~--~V~v~dr~~~~--~~~l~~~~~~~g~~i~~---~~s~~e~v~~l~~~d~Iil~   73 (470)
T PTZ00142          2 SDIGLIGL-AVMGQNLALNIASRGF--KISVYNRTYEK--TEEFVKKAKEGNTRVKG---YHTLEELVNSLKKPRKVILL   73 (470)
T ss_pred             CEEEEEeE-hHHHHHHHHHHHHCCC--eEEEEeCCHHH--HHHHHHhhhhcCCccee---cCCHHHHHhcCCCCCEEEEE
Confidence            48999999 9999999999999998  99999997622  12222110  0112332   346666665   58988887


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecCCC
Q 017551           96 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPV  140 (369)
Q Consensus        96 ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNPv  140 (369)
                      .-    ++           ..+.++.+.+..+ .|+.+||..+|-.
T Consensus        74 v~----~~-----------~~v~~vi~~l~~~L~~g~iIID~gn~~  104 (470)
T PTZ00142         74 IK----AG-----------EAVDETIDNLLPLLEKGDIIIDGGNEW  104 (470)
T ss_pred             eC----Ch-----------HHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence            31    11           2344444444443 3677888887643

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=96.76  E-value=0.0065  Score=56.42  Aligned_cols=113  Identities=12%  Similarity=0.123  Sum_probs=63.9

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------cCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LTGM   89 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l~~A   89 (369)
                      |+|.|+||+|++|..++..|...|.  +|+++|.+....  ..+.+.. ...+..+. .-+|   ++++       +.+.
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~--~V~~~~r~~~~~--~~~~~~~-~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i   75 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGH--KVIATGRRQERL--QELKDEL-GDNLYIAQLDVRNRAAIEEMLASLPAEWRNI   75 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC--EEEEEECCHHHH--HHHHHHh-ccceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            5899999999999999999998887  899999875211  1111110 11222111 1112   2222       3479


Q ss_pred             cEEEEcCCCCC--CC--CCCH---HHHHHHHHHHHHHHHHHHhhhC---CCeEEEEecC
Q 017551           90 DLVIIPAGVPR--KP--GMTR---DDLFNINAGIVRTLCEGIAKCC---PNATVNLISN  138 (369)
Q Consensus        90 DiVii~ag~p~--k~--g~~r---~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tN  138 (369)
                      |+||..+|...  .+  ..+.   ...+..|......+.+.+..++   ..+.++++|.
T Consensus        76 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS  134 (248)
T PRK10538         76 DVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGS  134 (248)
T ss_pred             CEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECC
Confidence            99999988642  22  1222   3345666555444444443322   2345666654

>PRK08818 prephenate dehydrogenase; Provisional

Probab=96.74  E-value=0.011  Score=59.17  Aligned_cols=84  Identities=19%  Similarity=0.173  Sum_probs=55.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP   99 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p   99 (369)
                      .++|+|||.+|.||..++..|.+.. ..+|+.+|.+          +.          ..+++.+++++||+||++.  |
T Consensus         4 ~~~I~IIGl~GliGgslA~alk~~~-~~~V~g~D~~----------d~----------~~~~~~~~v~~aDlVilav--P   60 (370)
T PRK08818          4 QPVVGIVGSAGAYGRWLARFLRTRM-QLEVIGHDPA----------DP----------GSLDPATLLQRADVLIFSA--P   60 (370)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcC-CCEEEEEcCC----------cc----------ccCCHHHHhcCCCEEEEeC--C
Confidence            4599999999999999999999762 3388999973          10          1235567899999999984  3


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe
Q 017551          100 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI  136 (369)
Q Consensus       100 ~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~  136 (369)
                                ...+.+++.++++......|+++|.-+
T Consensus        61 ----------v~~~~~~l~~l~~~~~~l~~~~iVtDV   87 (370)
T PRK08818         61 ----------IRHTAALIEEYVALAGGRAAGQLWLDV   87 (370)
T ss_pred             ----------HHHHHHHHHHHhhhhcCCCCCeEEEEC
Confidence                      234444444444432112456655433

>PRK05717 oxidoreductase; Validated

Probab=96.73  E-value=0.0055  Score=57.10  Aligned_cols=115  Identities=15%  Similarity=0.171  Sum_probs=67.3

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------cC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT   87 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l~   87 (369)
                      +.++|.|+||+|++|+.++..|+..+.  +|+++|.+....... ..+..  ..+..+. .-++   ..++       +.
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~--~v~~~~~~~~~~~~~-~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   83 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGW--QVVLADLDRERGSKV-AKALG--ENAWFIAMDVADEAQVAAGVAEVLGQFG   83 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCC--EEEEEcCCHHHHHHH-HHHcC--CceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            346899999999999999999998887  899999865221111 11111  1122111 1122   1111       23


Q ss_pred             CCcEEEEcCCCCCCC-----CCC---HHHHHHHHHHHHHHHHHHHhhhC--CCeEEEEecC
Q 017551           88 GMDLVIIPAGVPRKP-----GMT---RDDLFNINAGIVRTLCEGIAKCC--PNATVNLISN  138 (369)
Q Consensus        88 ~ADiVii~ag~p~k~-----g~~---r~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tN  138 (369)
                      ..|+||..+|.....     ..+   ....+..|..-...+.+.+..+.  ..+.++++|.
T Consensus        84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS  144 (255)
T PRK05717         84 RLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLAS  144 (255)
T ss_pred             CCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcc
Confidence            479999999875321     112   23456777776666666665432  3455666653

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=96.70  E-value=0.019  Score=53.57  Aligned_cols=74  Identities=18%  Similarity=0.200  Sum_probs=48.8

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------cC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT   87 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l~   87 (369)
                      |+|.|+||+|.+|..++..|+..+.  +|++.|.+.  ......++.+..   .+..+. .-+|   .++.       +.
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~Dv~d~~~~~~~~~~~~~~~g   75 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGA--RVVISSRNEENLEKALKELKEYG---EVYAVKADLSDKDDLKNLVKEAWELLG   75 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcC---CceEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            5899999999999999999999987  899999876  222333343211   122111 1122   2222       34


Q ss_pred             CCcEEEEcCCCC
Q 017551           88 GMDLVIIPAGVP   99 (369)
Q Consensus        88 ~ADiVii~ag~p   99 (369)
                      ..|++|..+|..
T Consensus        76 ~id~li~naG~~   87 (259)
T PRK08340         76 GIDALVWNAGNV   87 (259)
T ss_pred             CCCEEEECCCCC
Confidence            689999999864

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=96.69  E-value=0.039  Score=50.92  Aligned_cols=116  Identities=17%  Similarity=0.225  Sum_probs=66.6

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCC---hh-------hhcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LE-------NALT   87 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~d---l~-------~al~   87 (369)
                      +.++|.|+||+|++|+.++..|+..+.  +|++++.+........+....  ..+..+. .-++   +.       +.+.
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~--~vi~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGA--DIVGAGRSEPSETQQQVEALG--RRFLSLTADLSDIEAIKALVDSAVEEFG   79 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCchHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            356899999999999999999999987  899999765322222232211  2222221 1122   21       1234


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHh----hhCCCeEEEEecC
Q 017551           88 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIA----KCCPNATVNLISN  138 (369)
Q Consensus        88 ~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~~i~~~i~----~~~p~a~viv~tN  138 (369)
                      ..|++|..+|.....   ..+   -.+.+..|+.-...+.+.+.    +....+.+++++.
T Consensus        80 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS  140 (248)
T TIGR01832        80 HIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIAS  140 (248)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence            689999998864211   111   23345666554444444443    3322456666553

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=96.69  E-value=0.015  Score=54.09  Aligned_cols=116  Identities=16%  Similarity=0.230  Sum_probs=68.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------c
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENA-------L   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l   86 (369)
                      .++|.|+||+|++|..++..|+..|.  +|++.|.++.  ......+...  ..++..+. .-+|   +.++       +
T Consensus        10 ~k~vlItGa~g~iG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (255)
T PRK07523         10 GRRALVTGSSQGIGYALAEGLAQAGA--EVILNGRDPAKLAAAAESLKGQ--GLSAHALAFDVTDHDAVRAAIDAFEAEI   85 (255)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhc--CceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            46999999999999999999999887  8999998762  2222233221  12222221 1122   2222       2


Q ss_pred             CCCcEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHhhhC---CCeEEEEecCC
Q 017551           87 TGMDLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEGIAKCC---PNATVNLISNP  139 (369)
Q Consensus        87 ~~ADiVii~ag~p~k-~--g~~---r~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tNP  139 (369)
                      ...|+||..+|.+.. +  ..+   -...+..|+.-...+.+.+.++.   ..+.++++|..
T Consensus        86 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~  147 (255)
T PRK07523         86 GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASV  147 (255)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccc
Confidence            457999999886431 1  112   23445677665555555555442   34566766643

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=96.68  E-value=0.015  Score=54.23  Aligned_cols=109  Identities=16%  Similarity=0.106  Sum_probs=62.3

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe----C-CCChhhhc-CCCcEE
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL----G-QPQLENAL-TGMDLV   92 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~----~-t~dl~~al-~~ADiV   92 (369)
                      .++||.|+||+|++|+.++..|+.++.  +|+++..+...... .+..   ...+..+.    . ..++.+++ .++|+|
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~-~~~~---~~~~~~~~~Dl~d~~~~l~~~~~~~~d~v   89 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGF--AVKAGVRDVDKAKT-SLPQ---DPSLQIVRADVTEGSDKLVEAIGDDSDAV   89 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCC--EEEEEecCHHHHHH-hccc---CCceEEEEeeCCCCHHHHHHHhhcCCCEE
Confidence            357999999999999999999998887  78777665421111 1111   11122111    1 12344666 689999


Q ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe
Q 017551           93 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI  136 (369)
Q Consensus        93 ii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~  136 (369)
                      |..+|.....+.  ......|..-...+.+.+.+.... .++++
T Consensus        90 i~~~g~~~~~~~--~~~~~~n~~~~~~ll~a~~~~~~~-~iV~i  130 (251)
T PLN00141         90 ICATGFRRSFDP--FAPWKVDNFGTVNLVEACRKAGVT-RFILV  130 (251)
T ss_pred             EECCCCCcCCCC--CCceeeehHHHHHHHHHHHHcCCC-EEEEE
Confidence            998875432111  111233444455666666655433 34444

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=96.67  E-value=0.017  Score=55.92  Aligned_cols=64  Identities=17%  Similarity=0.294  Sum_probs=44.5

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCC---CcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTG---MDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~---ADiVii~a   96 (369)
                      |||+|||. |.+|++++..|...+.  +|++||.+....  ..+.+.  .  ...   ..++++.+++   +|+|+++.
T Consensus         1 m~Ig~IGl-G~mG~~mA~~L~~~g~--~v~v~dr~~~~~--~~~~~~--g--~~~---~~s~~~~~~~~~~advVi~~v   67 (299)
T PRK12490          1 MKLGLIGL-GKMGGNMAERLREDGH--EVVGYDVNQEAV--DVAGKL--G--ITA---RHSLEELVSKLEAPRTIWVMV   67 (299)
T ss_pred             CEEEEEcc-cHHHHHHHHHHHhCCC--EEEEEECCHHHH--HHHHHC--C--Cee---cCCHHHHHHhCCCCCEEEEEe
Confidence            58999999 9999999999998887  899999875221  222221  1  121   2345566655   68998873

>TIGR01746 Thioester-redct thioester reductase domain

Probab=96.67  E-value=0.019  Score=55.65  Aligned_cols=114  Identities=13%  Similarity=0.075  Sum_probs=71.1

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHH-----HHhhcc-----cCC-CeEEEEeCC----------C
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVT-----ADISHM-----DTG-AVVRGFLGQ----------P   80 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~-----~dL~~~-----~~~-~~v~~~~~t----------~   80 (369)
                      +|.|+||+|++|++++..|+..+...+|+++.........     ..+...     ... .++....+.          .
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            5889999999999999999988754578888876521111     111110     000 244443221          1


Q ss_pred             ChhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           81 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        81 dl~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ++.+..+++|+||..|+... ......++...|+.....+.+.+.+..... ++++|
T Consensus        81 ~~~~~~~~~d~vih~a~~~~-~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~-~v~iS  135 (367)
T TIGR01746        81 EWERLAENVDTIVHNGALVN-WVYPYSELRAANVLGTREVLRLAASGRAKP-LHYVS  135 (367)
T ss_pred             HHHHHHhhCCEEEeCCcEec-cCCcHHHHhhhhhHHHHHHHHHHhhCCCce-EEEEc
Confidence            23445688999999987542 123345566788888888888887765544 44443

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK12939 short chain dehydrogenase; Provisional

Probab=96.64  E-value=0.042  Score=50.49  Aligned_cols=115  Identities=15%  Similarity=0.221  Sum_probs=67.5

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCCh---hhhc-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQL---ENAL-------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~dl---~~al-------   86 (369)
                      .++|.|+||+|++|+.++..|...+.  ++++++.+..  .....++...  ..++..+. .-+|.   .+.+       
T Consensus         7 ~~~vlItGa~g~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (250)
T PRK12939          7 GKRALVTGAARGLGAAFAEALAEAGA--TVAFNDGLAAEARELAAALEAA--GGRAHAIAADLADPASVQRFFDAAAAAL   82 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999887  8999988752  2233344322  12333221 11221   1222       


Q ss_pred             CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 017551           87 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  138 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN  138 (369)
                      .+.|+||..+|.....   ..+.   ...+..|..-...+.+.+..+   ...+.++++|.
T Consensus        83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS  143 (250)
T PRK12939         83 GGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLAS  143 (250)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECc
Confidence            5789999998864321   1222   223455666555555554433   23456666654

>PRK08643 acetoin reductase; Validated

Probab=96.64  E-value=0.035  Score=51.51  Aligned_cols=114  Identities=20%  Similarity=0.252  Sum_probs=65.4

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------cC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT   87 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l~   87 (369)
                      +++.|+||+|++|..++..|+..+.  +|+++|.+..  .....++.+..  ..+..+. .-++   +.++       +.
T Consensus         3 k~~lItGas~giG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   78 (256)
T PRK08643          3 KVALVTGAGQGIGFAIAKRLVEDGF--KVAIVDYNEETAQAAADKLSKDG--GKAIAVKADVSDRDQVFAAVRQVVDTFG   78 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999887  8999998752  22233343221  2222221 1122   2222       23


Q ss_pred             CCcEEEEcCCCCC-CCC--CCH---HHHHHHHHHHH----HHHHHHHhhhCCCeEEEEecC
Q 017551           88 GMDLVIIPAGVPR-KPG--MTR---DDLFNINAGIV----RTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        88 ~ADiVii~ag~p~-k~g--~~r---~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tN  138 (369)
                      +.|+||..+|... .+-  .+.   ...+..|+.-.    +.+.+.+.+..+++.++++|.
T Consensus        79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS  139 (256)
T PRK08643         79 DLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATS  139 (256)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECc
Confidence            6899999998642 221  111   23345565443    334444443334566777664

>PRK08265 short chain dehydrogenase; Provisional

Probab=96.64  E-value=0.012  Score=55.24  Aligned_cols=111  Identities=15%  Similarity=0.141  Sum_probs=64.0

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------c
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENA-------L   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l   86 (369)
                      .+++.|+||+|++|..++..|+..|.  +|++.|.+..  .....++.     .++..+. .-+|   ++++       +
T Consensus         6 ~k~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dl~~~~~~~~~~~~~~~~~   78 (261)
T PRK08265          6 GKVAIVTGGATLIGAAVARALVAAGA--RVAIVDIDADNGAAVAASLG-----ERARFIATDITDDAAIERAVATVVARF   78 (261)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhC-----CeeEEEEecCCCHHHHHHHHHHHHHHh
Confidence            45899999999999999999999987  9999998752  11222221     1222211 1122   2222       2


Q ss_pred             CCCcEEEEcCCCCCCC--CCCH---HHHHHHHHHHHHHHHHHHhhh--CCCeEEEEec
Q 017551           87 TGMDLVIIPAGVPRKP--GMTR---DDLFNINAGIVRTLCEGIAKC--CPNATVNLIS  137 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~--g~~r---~~~~~~N~~i~~~i~~~i~~~--~p~a~viv~t  137 (369)
                      ...|++|..+|.....  ..+.   ...+..|+.-...+.+.+..+  .+.+.++++|
T Consensus        79 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~is  136 (261)
T PRK08265         79 GRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFT  136 (261)
T ss_pred             CCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEEC
Confidence            4679999999864322  2222   233455655444444433322  3456666665

>PRK05708 2-dehydropantoate 2-reductase; Provisional

Probab=96.64  E-value=0.032  Score=54.23  Aligned_cols=121  Identities=14%  Similarity=0.149  Sum_probs=70.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHH--hhcccCCC--eEEEEeCCCChhhhcCCCcEEE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTAD--ISHMDTGA--VVRGFLGQPQLENALTGMDLVI   93 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~d--L~~~~~~~--~v~~~~~t~dl~~al~~ADiVi   93 (369)
                      .|||+|+|+ |.||+.++..|...+.  +|.|++...  ....-.+  +.-.....  .+.... .+  .+.....|+||
T Consensus         2 ~m~I~IiGa-GaiG~~~a~~L~~~G~--~V~lv~r~~~~~~~i~~~~Gl~i~~~g~~~~~~~~~-~~--~~~~~~~D~vi   75 (305)
T PRK05708          2 SMTWHILGA-GSLGSLWACRLARAGL--PVRLILRDRQRLAAYQQAGGLTLVEQGQASLYAIPA-ET--ADAAEPIHRLL   75 (305)
T ss_pred             CceEEEECC-CHHHHHHHHHHHhCCC--CeEEEEechHHHHHHhhcCCeEEeeCCcceeeccCC-CC--cccccccCEEE
Confidence            479999999 9999999999998886  899999864  1111100  11000011  111111 11  12356889999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhc
Q 017551           94 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLD  169 (369)
Q Consensus        94 i~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld  169 (369)
                      ++.-.            ..    ..+..+.+..+ .++..|+.+-|=++....+     ++.  ++.+++++- +...
T Consensus        76 v~vK~------------~~----~~~al~~l~~~l~~~t~vv~lQNGv~~~e~l-----~~~--~~~~~v~~g~~~~g  130 (305)
T PRK05708         76 LACKA------------YD----AEPAVASLAHRLAPGAELLLLQNGLGSQDAV-----AAR--VPHARCIFASSTEG  130 (305)
T ss_pred             EECCH------------Hh----HHHHHHHHHhhCCCCCEEEEEeCCCCCHHHH-----HHh--CCCCcEEEEEeeec
Confidence            98511            11    22334445544 3788888888988876432     333  666777755 4433

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=96.63  E-value=0.018  Score=55.71  Aligned_cols=64  Identities=17%  Similarity=0.257  Sum_probs=43.9

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcC---CCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT---GMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~---~ADiVii~a   96 (369)
                      |||+|||. |.+|++++..|...+.  +|.+||.+....  .++.+.  .  +..   ..++.+.++   ++|+|++..
T Consensus         1 m~Ig~IGl-G~MG~~mA~~L~~~g~--~v~v~dr~~~~~--~~~~~~--g--~~~---~~~~~e~~~~~~~~dvvi~~v   67 (301)
T PRK09599          1 MQLGMIGL-GRMGGNMARRLLRGGH--EVVGYDRNPEAV--EALAEE--G--ATG---ADSLEELVAKLPAPRVVWLMV   67 (301)
T ss_pred             CEEEEEcc-cHHHHHHHHHHHHCCC--eEEEEECCHHHH--HHHHHC--C--Cee---cCCHHHHHhhcCCCCEEEEEe
Confidence            58999999 9999999999998887  899999986221  222221  1  122   223445454   469988873

>COG1893 ApbA Ketopantoate reductase [Coenzyme metabolism]

Probab=96.63  E-value=0.012  Score=57.48  Aligned_cols=122  Identities=23%  Similarity=0.245  Sum_probs=73.3

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHH---HhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTA---DISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~---dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      |||+|+|| |.||+.+++.|.+.+.  .+.++-..+. ...-.   .+.+........... +++ .+.+..+|+||++.
T Consensus         1 mkI~IlGa-GAvG~l~g~~L~~~g~--~V~~~~R~~~~~~l~~~GL~i~~~~~~~~~~~~~-~~~-~~~~~~~Dlviv~v   75 (307)
T COG1893           1 MKILILGA-GAIGSLLGARLAKAGH--DVTLLVRSRRLEALKKKGLRIEDEGGNFTTPVVA-ATD-AEALGPADLVIVTV   75 (307)
T ss_pred             CeEEEECC-cHHHHHHHHHHHhCCC--eEEEEecHHHHHHHHhCCeEEecCCCcccccccc-ccC-hhhcCCCCEEEEEe
Confidence            69999999 9999999999999983  6666665442 11111   111111101111111 222 46778999999985


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCChhHHHHHHHHHhCCCCCCc-EEEechhcH
Q 017551           97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKK-LLGVTMLDV  170 (369)
Q Consensus        97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~k-viG~t~Ld~  170 (369)
                      -..                -..+..+.+..+. |+.+|+..=|=.+..     |.+++.  ++.++ +.|+|+...
T Consensus        76 Ka~----------------q~~~al~~l~~~~~~~t~vl~lqNG~g~~-----e~l~~~--~~~~~il~G~~~~~a  128 (307)
T COG1893          76 KAY----------------QLEEALPSLAPLLGPNTVVLFLQNGLGHE-----EELRKI--LPKETVLGGVTTHGA  128 (307)
T ss_pred             ccc----------------cHHHHHHHhhhcCCCCcEEEEEeCCCcHH-----HHHHHh--CCcceEEEEEeeeee
Confidence            211                1345666777666 667788888888776     334443  45554 457876543

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=96.63  E-value=0.01  Score=57.44  Aligned_cols=64  Identities=20%  Similarity=0.313  Sum_probs=47.3

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      +||+|||. |.+|.+++..|+..+.  +|.+||++...  ..++....    ...   .+++.+++++||+||++.
T Consensus         2 ~~Ig~IGl-G~mG~~mA~~l~~~G~--~V~v~d~~~~~--~~~~~~~g----~~~---~~s~~~~~~~aDvVi~~v   65 (296)
T PRK15461          2 AAIAFIGL-GQMGSPMASNLLKQGH--QLQVFDVNPQA--VDALVDKG----ATP---AASPAQAAAGAEFVITML   65 (296)
T ss_pred             CeEEEEee-CHHHHHHHHHHHHCCC--eEEEEcCCHHH--HHHHHHcC----Ccc---cCCHHHHHhcCCEEEEec
Confidence            48999999 9999999999999887  99999997622  12222211    111   245678899999999984

>PRK12367 short chain dehydrogenase; Provisional

Probab=96.61  E-value=0.024  Score=53.11  Aligned_cols=99  Identities=16%  Similarity=0.194  Sum_probs=59.7

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCChhhhcCCCcEEEEcCCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQLENALTGMDLVIIPAGVP   99 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~dl~~al~~ADiVii~ag~p   99 (369)
                      +++.|+||+|++|..++..++..|.  +++++|.+......... +.. ...+.... ...+..+.+...|++|..||..
T Consensus        15 k~~lITGas~gIG~ala~~l~~~G~--~Vi~~~r~~~~~~~~~~-~~~-~~~~~~D~~~~~~~~~~~~~iDilVnnAG~~   90 (245)
T PRK12367         15 KRIGITGASGALGKALTKAFRAKGA--KVIGLTHSKINNSESND-ESP-NEWIKWECGKEESLDKQLASLDVLILNHGIN   90 (245)
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC--EEEEEECCchhhhhhhc-cCC-CeEEEeeCCCHHHHHHhcCCCCEEEECCccC
Confidence            5899999999999999999999987  89999987521111111 110 11122211 1123445677899999999874


Q ss_pred             CCCCCCH---HHHHHHHHHHHHHHHHH
Q 017551          100 RKPGMTR---DDLFNINAGIVRTLCEG  123 (369)
Q Consensus       100 ~k~g~~r---~~~~~~N~~i~~~i~~~  123 (369)
                      .....+.   .+.+..|+.....+++.
T Consensus        91 ~~~~~~~~~~~~~~~vN~~g~~~l~~~  117 (245)
T PRK12367         91 PGGRQDPENINKALEINALSSWRLLEL  117 (245)
T ss_pred             CcCCCCHHHHHHHHHHHhHHHHHHHHH
Confidence            3222332   34456676544444443

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=96.61  E-value=0.029  Score=56.82  Aligned_cols=102  Identities=22%  Similarity=0.229  Sum_probs=61.0

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCC-eEEEE-eCCCChhhhcCCCcEEEEcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGA-VVRGF-LGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~-~v~~~-~~t~dl~~al~~ADiVii~a   96 (369)
                      +.++|.|+||+|++|+.++..|.++|.  +++++|.+... ....+.+..... .+... +..+++.+.+.+.|++|..+
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~--~Vi~l~r~~~~-l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnA  253 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGA--KVVALTSNSDK-ITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINH  253 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHH-HHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECC
Confidence            457899999999999999999999887  89999986521 111121111111 11111 11123445678999999998


Q ss_pred             CCCCCCCCCH---HHHHHHHHHHHHHHHHH
Q 017551           97 GVPRKPGMTR---DDLFNINAGIVRTLCEG  123 (369)
Q Consensus        97 g~p~k~g~~r---~~~~~~N~~i~~~i~~~  123 (369)
                      |.......+.   ...+..|......+.+.
T Consensus       254 Gi~~~~~~s~e~~~~~~~vNv~g~i~Li~a  283 (406)
T PRK07424        254 GINVHGERTPEAINKSYEVNTFSAWRLMEL  283 (406)
T ss_pred             CcCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            8653333332   34456665544444444

>PRK12491 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.61  E-value=0.011  Score=56.57  Aligned_cols=67  Identities=13%  Similarity=0.191  Sum_probs=46.8

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCC--CcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPL--VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~--~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      +||++||+ |.+|++++..|.+.+.  ..+|..+|.+...  ...+.... .  ++.   .++..+.+++||+||++.
T Consensus         3 ~~IgfIG~-G~MG~aia~~L~~~g~~~~~~I~v~~r~~~~--~~~l~~~~-g--~~~---~~~~~e~~~~aDiIiLav   71 (272)
T PRK12491          3 KQIGFIGC-GNMGIAMIGGMINKNIVSPDQIICSDLNVSN--LKNASDKY-G--ITI---TTNNNEVANSADILILSI   71 (272)
T ss_pred             CeEEEECc-cHHHHHHHHHHHHCCCCCCceEEEECCCHHH--HHHHHHhc-C--cEE---eCCcHHHHhhCCEEEEEe
Confidence            58999999 9999999999988774  4579999986522  22222211 1  222   234456789999999985

>PRK07679 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.60  E-value=0.024  Score=54.29  Aligned_cols=69  Identities=14%  Similarity=0.181  Sum_probs=47.3

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCC--CCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINP--LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~--~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      .|||+|||+ |.+|++++..|..++  ...+|.++|.+.. ....++....   .++.   +.+..+++++||+||++.
T Consensus         3 ~mkI~~IG~-G~mG~aia~~l~~~g~~~~~~v~v~~r~~~-~~~~~l~~~~---g~~~---~~~~~e~~~~aDvVilav   73 (279)
T PRK07679          3 IQNISFLGA-GSIAEAIIGGLLHANVVKGEQITVSNRSNE-TRLQELHQKY---GVKG---THNKKELLTDANILFLAM   73 (279)
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCCCcceEEEECCCCH-HHHHHHHHhc---CceE---eCCHHHHHhcCCEEEEEe
Confidence            479999999 999999999998876  2348899997541 1222333211   1232   234567789999999984

>PRK08251 short chain dehydrogenase; Provisional

Probab=96.60  E-value=0.094  Score=48.32  Aligned_cols=102  Identities=22%  Similarity=0.246  Sum_probs=59.8

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCChh----------hhcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQLE----------NALT   87 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl~----------~al~   87 (369)
                      +++.|+||+|++|..++..|..++.  +|++.+.+.  ......++........+.... .-+|.+          +.+.
T Consensus         3 k~vlItGas~giG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK08251          3 QKILITGASSGLGAGMAREFAAKGR--DLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELG   80 (248)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4799999999999999999998886  899999876  222333333221112333221 122221          2245


Q ss_pred             CCcEEEEcCCCCCCCCC---C---HHHHHHHHHHHHHHHHHHH
Q 017551           88 GMDLVIIPAGVPRKPGM---T---RDDLFNINAGIVRTLCEGI  124 (369)
Q Consensus        88 ~ADiVii~ag~p~k~g~---~---r~~~~~~N~~i~~~i~~~i  124 (369)
                      ..|+||..+|.......   +   -...+..|..-...+.+.+
T Consensus        81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~  123 (248)
T PRK08251         81 GLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAA  123 (248)
T ss_pred             CCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHH
Confidence            78999999987432211   1   1233456655444444443

>PRK06180 short chain dehydrogenase; Provisional

Probab=96.60  E-value=0.026  Score=53.44  Aligned_cols=113  Identities=13%  Similarity=0.090  Sum_probs=65.3

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------CC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------TG   88 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-------~~   88 (369)
                      .++|.|+||+|++|+.++..|+..|.  +|++++.+....  .++.... ..++..+. .-+|   +.+++       ..
T Consensus         4 ~~~vlVtGasggiG~~la~~l~~~G~--~V~~~~r~~~~~--~~l~~~~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~   78 (277)
T PRK06180          4 MKTWLITGVSSGFGRALAQAALAAGH--RVVGTVRSEAAR--ADFEALH-PDRALARLLDVTDFDAIDAVVADAEATFGP   78 (277)
T ss_pred             CCEEEEecCCChHHHHHHHHHHhCcC--EEEEEeCCHHHH--HHHHhhc-CCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            35799999999999999999999887  899999875211  1222111 11222111 1122   22222       35


Q ss_pred             CcEEEEcCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEec
Q 017551           89 MDLVIIPAGVPRK-P--GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLIS  137 (369)
Q Consensus        89 ADiVii~ag~p~k-~--g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~t  137 (369)
                      .|+||..+|.... +  ..+.   ...+..|+.-...+.+.+..+   ...+.++++|
T Consensus        79 ~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iS  136 (277)
T PRK06180         79 IDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNIT  136 (277)
T ss_pred             CCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEe
Confidence            8999999986421 1  2222   233667776666666554332   2234566665

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.59  E-value=0.025  Score=50.54  Aligned_cols=33  Identities=39%  Similarity=0.587  Sum_probs=29.7

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ||.|+|+ |.+|+.++..|+..|. .+++|+|.+.
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gv-g~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGV-GNLKLVDFDV   33 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCC-CeEEEEeCCE
Confidence            6899999 9999999999998885 5899999985

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK06182 short chain dehydrogenase; Validated

Probab=96.59  E-value=0.02  Score=53.96  Aligned_cols=113  Identities=13%  Similarity=0.096  Sum_probs=65.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEE-eCCCChhhhcC-------CCcE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQLENALT-------GMDL   91 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~-~~t~dl~~al~-------~ADi   91 (369)
                      .++|.|+||+|++|+.++..|...+.  +|++.+.+....  .++..... .-+... +...++.++++       +.|+
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~G~--~V~~~~r~~~~l--~~~~~~~~-~~~~~Dv~~~~~~~~~~~~~~~~~~~id~   77 (273)
T PRK06182          3 KKVALVTGASSGIGKATARRLAAQGY--TVYGAARRVDKM--EDLASLGV-HPLSLDVTDEASIKAAVDTIIAEEGRIDV   77 (273)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHH--HHHHhCCC-eEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            45899999999999999999998887  899999875211  11211110 111211 11122333333       7899


Q ss_pred             EEEcCCCCCC-C--CCC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 017551           92 VIIPAGVPRK-P--GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        92 Vii~ag~p~k-~--g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      ||..+|.... +  ..+   ....+..|...    .+.+.+.+++... +.++++|.
T Consensus        78 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-g~iv~isS  133 (273)
T PRK06182         78 LVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRS-GRIINISS  133 (273)
T ss_pred             EEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCC-CEEEEEcc
Confidence            9999986421 1  111   23345556543    5556666655543 45566553

>KOG2305 consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]

Probab=96.59  E-value=0.0058  Score=56.62  Aligned_cols=94  Identities=19%  Similarity=0.296  Sum_probs=64.8

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC------chhHHHH---hhcc-cCCC------eEEEEeCCCChhh
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN------TPGVTAD---ISHM-DTGA------VVRGFLGQPQLEN   84 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~------~~g~~~d---L~~~-~~~~------~v~~~~~t~dl~~   84 (369)
                      -||+|+|. |-+|+..|.+++..|+  +|.||||.+      +.....|   |... ....      .+..+++|+++.|
T Consensus         4 ~ki~ivgS-gl~g~~WAmlFAs~Gy--qVqlYDI~e~Ql~~ALen~~Kel~~Lee~g~lrGnlsa~eqla~is~t~~l~E   80 (313)
T KOG2305|consen    4 GKIAIVGS-GLVGSSWAMLFASSGY--QVQLYDILEKQLQTALENVEKELRKLEEHGLLRGNLSADEQLALISGTTSLNE   80 (313)
T ss_pred             cceeEeec-ccccchHHHHHhccCc--eEEEeeccHHHHHHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhCCccHHH
Confidence            49999997 9999999999999999  999999987      1222223   3221 1111      2222346789999


Q ss_pred             hcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCe
Q 017551           85 ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNA  131 (369)
Q Consensus        85 al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a  131 (369)
                      ..++|=+|-.++              .+.+...+.+.+++++.. |..
T Consensus        81 ~vk~Ai~iQEcv--------------pE~L~lkk~ly~qlD~i~d~~t  114 (313)
T KOG2305|consen   81 LVKGAIHIQECV--------------PEDLNLKKQLYKQLDEIADPTT  114 (313)
T ss_pred             HHhhhhhHHhhc--------------hHhhHHHHHHHHHHHHhcCCce
Confidence            999985544442              344667788889999876 443

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.59  E-value=0.013  Score=50.49  Aligned_cols=74  Identities=23%  Similarity=0.269  Sum_probs=49.9

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP   95 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~   95 (369)
                      .+.++|.|+|+ |.+|..++..+...+ ..++.++|.+..  ...+.++....    +...  ..++.+.++++|+||++
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g-~~~v~v~~r~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~Dvvi~~   88 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELG-AAKIVIVNRTLEKAKALAERFGELG----IAIA--YLDLEELLAEADLIINT   88 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHhhcc----ccee--ecchhhccccCCEEEeC
Confidence            34579999999 999999999998876 458999999762  22222222110    1111  23455668999999998


Q ss_pred             CCCC
Q 017551           96 AGVP   99 (369)
Q Consensus        96 ag~p   99 (369)
                      ...+
T Consensus        89 ~~~~   92 (155)
T cd01065          89 TPVG   92 (155)
T ss_pred             cCCC
Confidence            6443

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK12937 short chain dehydrogenase; Provisional

Probab=96.56  E-value=0.022  Score=52.25  Aligned_cols=116  Identities=15%  Similarity=0.154  Sum_probs=66.9

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc---hhHHHHhhcccCCCeEEEEe-CCC---Chhhhc-----
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL-GQP---QLENAL-----   86 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~---~g~~~dL~~~~~~~~v~~~~-~t~---dl~~al-----   86 (369)
                      +.++|.|+||+|++|+.++..|+..+.  ++++++.+..   .....++...  ..++..+. .-+   ++++++     
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGF--AVAVNYAGSAAAADELVAEIEAA--GGRAIAVQADVADAAAVTRLFDAAET   79 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEecCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            346899999999999999999999987  7777766541   2222223221  12333221 111   223333     


Q ss_pred             --CCCcEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecC
Q 017551           87 --TGMDLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEGIAKC-CPNATVNLISN  138 (369)
Q Consensus        87 --~~ADiVii~ag~p~k-~--g~~---r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tN  138 (369)
                        .+.|+||..+|.... +  ..+   ....+..|+.....+.+.+.+. .+.+.++++|-
T Consensus        80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss  140 (245)
T PRK12937         80 AFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLST  140 (245)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEee
Confidence              368999999986421 1  111   2334566666555555555433 24556766653

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=96.55  E-value=0.021  Score=54.98  Aligned_cols=110  Identities=17%  Similarity=0.105  Sum_probs=71.6

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-c--hhHHHHhhcccCCCeEEEEeC-CCChhhhcC--CCcEEEE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-T--PGVTADISHMDTGAVVRGFLG-QPQLENALT--GMDLVII   94 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-~--~g~~~dL~~~~~~~~v~~~~~-t~dl~~al~--~ADiVii   94 (369)
                      |++.|+|++||||+++...+..+..-.+|+.+|.-. +  ..-..++.+......++...+ ...+.+.++  +.|.|+.
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh   80 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH   80 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence            589999999999999998777765546788999765 2  222334444322223333221 122334555  6899999


Q ss_pred             cCCCCCCC-C-CCHHHHHHHHHHHHHHHHHHHhhhCCC
Q 017551           95 PAGVPRKP-G-MTRDDLFNINAGIVRTLCEGIAKCCPN  130 (369)
Q Consensus        95 ~ag~p~k~-g-~~r~~~~~~N~~i~~~i~~~i~~~~p~  130 (369)
                      .|.-.-.- . ....+++..|+--...+.++++++...
T Consensus        81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~  118 (340)
T COG1088          81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGK  118 (340)
T ss_pred             echhccccccccChhhhhhcchHHHHHHHHHHHHhccc
Confidence            86422100 0 124678899999999999999999764

>PRK05875 short chain dehydrogenase; Provisional

Probab=96.55  E-value=0.039  Score=51.86  Aligned_cols=117  Identities=15%  Similarity=0.125  Sum_probs=67.1

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT------   87 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~------   87 (369)
                      .++|.|+||+|++|+.++..|+..+.  +|++++.+.  ......++.......++..+. .-+|   +.+.++      
T Consensus         7 ~k~vlItGasg~IG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (276)
T PRK05875          7 DRTYLVTGGGSGIGKGVAAGLVAAGA--AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH   84 (276)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46999999999999999999999988  899999875  222233333211112233221 1112   222333      


Q ss_pred             -CCcEEEEcCCCCCC--C--CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 017551           88 -GMDLVIIPAGVPRK--P--GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  138 (369)
Q Consensus        88 -~ADiVii~ag~p~k--~--g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN  138 (369)
                       ..|+||..+|....  +  ..+.   ...+..|......+.+.+.++   ...+.++++|.
T Consensus        85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS  146 (276)
T PRK05875         85 GRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISS  146 (276)
T ss_pred             CCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEec
Confidence             68999999885322  1  1222   233455666555555544332   23456666653

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=96.55  E-value=0.012  Score=54.69  Aligned_cols=115  Identities=19%  Similarity=0.235  Sum_probs=66.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEE-eCCCChhhh-------cCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF-LGQPQLENA-------LTGM   89 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~-~~t~dl~~a-------l~~A   89 (369)
                      .++|.|+||+|++|..++..|+.++.  +|+++|.+..  .....++....  ..+... +...+.+++       +...
T Consensus         6 ~~~vlItGas~~iG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (257)
T PRK07067          6 GKVALLTGAASGIGEAVAERYLAEGA--RVVIADIKPARARLAALEIGPAA--IAVSLDVTRQDSIDRIVAAAVERFGGI   81 (257)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCC--EEEEEcCCHHHHHHHHHHhCCce--EEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            35899999999999999999999987  8999998762  22222222110  011111 111122222       2468


Q ss_pred             cEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHhhh----CCCeEEEEecC
Q 017551           90 DLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEGIAKC----CPNATVNLISN  138 (369)
Q Consensus        90 DiVii~ag~p~k-~--g~~---r~~~~~~N~~i~~~i~~~i~~~----~p~a~viv~tN  138 (369)
                      |++|..+|.... +  ..+   ....+..|+.-...+.+.+..+    ...+.++++|-
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS  140 (257)
T PRK07067         82 DILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMAS  140 (257)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence            999999886421 1  112   2334567766665566555433    23456666654

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=96.54  E-value=0.046  Score=50.49  Aligned_cols=118  Identities=18%  Similarity=0.208  Sum_probs=68.7

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeC--C-CC----------h
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG--Q-PQ----------L   82 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~--t-~d----------l   82 (369)
                      .+.++|.|+||+|++|..++..|+..+.  +|+++|.+.  ......++.+... ..+..+..  + .+          +
T Consensus        10 ~~~k~vlItG~~g~iG~~la~~l~~~G~--~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~   86 (247)
T PRK08945         10 LKDRIILVTGAGDGIGREAALTYARHGA--TVILLGRTEEKLEAVYDEIEAAGG-PQPAIIPLDLLTATPQNYQQLADTI   86 (247)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHhcCC-CCceEEEecccCCCHHHHHHHHHHH
Confidence            3557999999999999999999998887  999999876  2233344443221 12221110  0 11          2


Q ss_pred             hhhcCCCcEEEEcCCCCCC--C--CCCH---HHHHHHHHHHHHHHHHHHhh---hCCCeEEEEecC
Q 017551           83 ENALTGMDLVIIPAGVPRK--P--GMTR---DDLFNINAGIVRTLCEGIAK---CCPNATVNLISN  138 (369)
Q Consensus        83 ~~al~~ADiVii~ag~p~k--~--g~~r---~~~~~~N~~i~~~i~~~i~~---~~p~a~viv~tN  138 (369)
                      .+.+...|+||..+|....  +  ..+.   ...+..|......+.+.+..   ..+...++++|.
T Consensus        87 ~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss  152 (247)
T PRK08945         87 EEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSS  152 (247)
T ss_pred             HHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEcc
Confidence            2334568999999886322  1  2222   33456666654444444432   234455666654

>PRK06928 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.53  E-value=0.03  Score=53.63  Aligned_cols=99  Identities=18%  Similarity=0.154  Sum_probs=61.6

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCC--CcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPL--VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~--~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      +||+|||+ |.+|+.++..|...+.  ..+|+++|.+... ....+....  ..+..   +++..++++++|+||++.. 
T Consensus         2 ~~I~iIG~-G~mG~ala~~L~~~g~~~~~~V~~~~r~~~~-~~~~l~~~~--~~~~~---~~~~~e~~~~aDvVilavp-   73 (277)
T PRK06928          2 EKIGFIGY-GSMADMIATKLLETEVATPEEIILYSSSKNE-HFNQLYDKY--PTVEL---ADNEAEIFTKCDHSFICVP-   73 (277)
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCCCcccEEEEeCCcHH-HHHHHHHHc--CCeEE---eCCHHHHHhhCCEEEEecC-
Confidence            58999999 9999999999988762  2489999986521 112222211  12222   2455677899999998841 


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCC
Q 017551           99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNS  142 (369)
Q Consensus        99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~  142 (369)
                      |               ..+.++++.+..+- ++..++.+.|-+++
T Consensus        74 p---------------~~~~~vl~~l~~~l~~~~~ivS~~aGi~~  103 (277)
T PRK06928         74 P---------------LAVLPLLKDCAPVLTPDRHVVSIAAGVSL  103 (277)
T ss_pred             H---------------HHHHHHHHHHHhhcCCCCEEEEECCCCCH
Confidence            1               22445555565443 45566666665543

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.53  E-value=0.053  Score=52.27  Aligned_cols=115  Identities=17%  Similarity=0.316  Sum_probs=74.3

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCC----------Chh
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQP----------QLE   83 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~----------dl~   83 (369)
                      ......|.|+||++++|..+|+.++..+-  .++|+|++.  ...-+..+.+..   .+..+. .-+          ..+
T Consensus        35 ~v~g~~vLITGgg~GlGr~ialefa~rg~--~~vl~Din~~~~~etv~~~~~~g---~~~~y~cdis~~eei~~~a~~Vk  109 (300)
T KOG1201|consen   35 SVSGEIVLITGGGSGLGRLIALEFAKRGA--KLVLWDINKQGNEETVKEIRKIG---EAKAYTCDISDREEIYRLAKKVK  109 (300)
T ss_pred             hccCCEEEEeCCCchHHHHHHHHHHHhCC--eEEEEeccccchHHHHHHHHhcC---ceeEEEecCCCHHHHHHHHHHHH
Confidence            34457999999988999999999999887  999999997  232333333321   222221 111          234


Q ss_pred             hhcCCCcEEEEcCCC-CCCCC--CCHHH---HHHHH----HHHHHHHHHHHhhhCCCeEEEEec
Q 017551           84 NALTGMDLVIIPAGV-PRKPG--MTRDD---LFNIN----AGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        84 ~al~~ADiVii~ag~-p~k~g--~~r~~---~~~~N----~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      +...+.|++|..||+ |-++.  +++.+   .++.|    ...++++.+.|.+.+ ++.|+.++
T Consensus       110 ~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~-~GHIV~Ia  172 (300)
T KOG1201|consen  110 KEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN-NGHIVTIA  172 (300)
T ss_pred             HhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC-CceEEEeh
Confidence            567899999999996 44443  23322   12233    567788888888764 66555553

>PRK06914 short chain dehydrogenase; Provisional

Probab=96.52  E-value=0.041  Score=51.88  Aligned_cols=114  Identities=11%  Similarity=0.101  Sum_probs=63.8

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCChh---------hhcCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQLE---------NALTG   88 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~dl~---------~al~~   88 (369)
                      +.+.|+||+|++|+.++..|+.++.  +|++++.+..  .....++.+......+..+. .-+|.+         +.+..
T Consensus         4 k~~lItGasg~iG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~   81 (280)
T PRK06914          4 KIAIVTGASSGFGLLTTLELAKKGY--LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGR   81 (280)
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCC
Confidence            4689999999999999999999887  8999987652  22222222211112333322 122321         11245


Q ss_pred             CcEEEEcCCCCCC--CC-CC---HHHHHHHHHHHHHHHHHH----HhhhCCCeEEEEec
Q 017551           89 MDLVIIPAGVPRK--PG-MT---RDDLFNINAGIVRTLCEG----IAKCCPNATVNLIS  137 (369)
Q Consensus        89 ADiVii~ag~p~k--~g-~~---r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~t  137 (369)
                      .|+||..+|.+..  .. .+   -.+.+..|......+.+.    +++... +.++++|
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~iv~vs  139 (280)
T PRK06914         82 IDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKS-GKIINIS  139 (280)
T ss_pred             eeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-CEEEEEC
Confidence            7999999886432  11 12   123455666555444444    444433 3444444

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.52  E-value=0.012  Score=49.43  Aligned_cols=72  Identities=25%  Similarity=0.310  Sum_probs=46.3

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccC--CCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVIIP   95 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~--~~~v~~~~~t~dl~~al~~ADiVii~   95 (369)
                      |||+|+|++|.+|+.++..+...+-..=+..+|.+.....-.|+.+...  ...+..   ++|+++.+..+|+||-.
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v---~~~l~~~~~~~DVvIDf   74 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPV---TDDLEELLEEADVVIDF   74 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBE---BS-HHHHTTH-SEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCccccc---chhHHHhcccCCEEEEc
Confidence            6999999999999999999998664434566777651112223322211  223333   36788999999988876

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK06172 short chain dehydrogenase; Provisional

Probab=96.51  E-value=0.027  Score=52.17  Aligned_cols=114  Identities=14%  Similarity=0.104  Sum_probs=65.1

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCC---ChhhhcC------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQP---QLENALT------   87 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~---dl~~al~------   87 (369)
                      .++|.|+||+|++|+.++..|...+.  +|++++.+.  ......++....  .++..+. .-+   ++.+.++      
T Consensus         7 ~k~ilItGas~~iG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~   82 (253)
T PRK06172          7 GKVALVTGGAAGIGRATALAFAREGA--KVVVADRDAAGGEETVALIREAG--GEALFVACDVTRDAEVKALVEQTIAAY   82 (253)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999998887  899999876  222233343221  2233221 112   2223333      


Q ss_pred             -CCcEEEEcCCCCCCC----CCCH---HHHHHHHHHHHHHHH----HHHhhhCCCeEEEEecC
Q 017551           88 -GMDLVIIPAGVPRKP----GMTR---DDLFNINAGIVRTLC----EGIAKCCPNATVNLISN  138 (369)
Q Consensus        88 -~ADiVii~ag~p~k~----g~~r---~~~~~~N~~i~~~i~----~~i~~~~p~a~viv~tN  138 (369)
                       ..|+||..+|.....    ..+.   ...+..|+.-...+.    +.+.+. ..+.++++|.
T Consensus        83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~~sS  144 (253)
T PRK06172         83 GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQ-GGGAIVNTAS  144 (253)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEECc
Confidence             459999999864321    2222   233456655443333    333332 2345666654

>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]

Probab=96.51  E-value=0.025  Score=54.43  Aligned_cols=64  Identities=27%  Similarity=0.333  Sum_probs=43.0

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchh---HH--HHhhcccCCCeEEEEeCCCC-hhhhcCCCcEEE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG---VT--ADISHMDTGAVVRGFLGQPQ-LENALTGMDLVI   93 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g---~~--~dL~~~~~~~~v~~~~~t~d-l~~al~~ADiVi   93 (369)
                      .++|+|+|. |.||..++..|...++  .+..++.+...+   .+  +++.+..          +.+ ..++.++||+||
T Consensus         3 ~~~v~IvG~-GliG~s~a~~l~~~g~--~v~i~g~d~~~~~~~~a~~lgv~d~~----------~~~~~~~~~~~aD~Vi   69 (279)
T COG0287           3 SMKVGIVGL-GLMGGSLARALKEAGL--VVRIIGRDRSAATLKAALELGVIDEL----------TVAGLAEAAAEADLVI   69 (279)
T ss_pred             CcEEEEECC-chHHHHHHHHHHHcCC--eEEEEeecCcHHHHHHHhhcCccccc----------ccchhhhhcccCCEEE
Confidence            469999998 9999999999999998  555555554111   11  1111110          122 257789999999


Q ss_pred             EcC
Q 017551           94 IPA   96 (369)
Q Consensus        94 i~a   96 (369)
                      ++.
T Consensus        70 vav   72 (279)
T COG0287          70 VAV   72 (279)
T ss_pred             Eec
Confidence            983

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=96.51  E-value=0.052  Score=50.54  Aligned_cols=115  Identities=16%  Similarity=0.164  Sum_probs=68.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHhhcccCCCeEEEEe-CCCCh---hhh-------c
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFL-GQPQL---ENA-------L   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~~~~~~v~~~~-~t~dl---~~a-------l   86 (369)
                      .++|.|+||+|++|+.++..|+..+.  +|++.|.+...  ....++...  ..++..+. .-+|.   .++       +
T Consensus        12 ~k~ilItGa~g~IG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~Dl~d~~~i~~~~~~~~~~~   87 (259)
T PRK08213         12 GKTALVTGGSRGLGLQIAEALGEAGA--RVVLSARKAEELEEAAAHLEAL--GIDALWIAADVADEADIERLAEETLERF   87 (259)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999998887  89999987521  122222211  12222221 11222   111       2


Q ss_pred             CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhh----CCCeEEEEecC
Q 017551           87 TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKC----CPNATVNLISN  138 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~g---~~---r~~~~~~N~~i~~~i~~~i~~~----~p~a~viv~tN  138 (369)
                      ...|+||..+|......   .+   ....+..|+.....+.+.+..+    .+.+.++++|.
T Consensus        88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS  149 (259)
T PRK08213         88 GHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVAS  149 (259)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECC
Confidence            46799999988632111   11   2344567877777777766554    23455666654

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=96.50  E-value=0.0024  Score=61.34  Aligned_cols=98  Identities=23%  Similarity=0.287  Sum_probs=60.0

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  100 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p~  100 (369)
                      |||.|+||+|++|+.+...|...+.  +++.++...     .|+.+...   +      .++-+.. +.|+||.+|+...
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~--~v~~~~r~~-----~dl~d~~~---~------~~~~~~~-~pd~Vin~aa~~~   63 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGY--EVIATSRSD-----LDLTDPEA---V------AKLLEAF-KPDVVINCAAYTN   63 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSE--EEEEESTTC-----S-TTSHHH---H------HHHHHHH---SEEEE------
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCC--EEEEeCchh-----cCCCCHHH---H------HHHHHHh-CCCeEeccceeec
Confidence            7999999999999999999998887  888886652     22322110   0      0111222 5899999987643


Q ss_pred             CC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551          101 KP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus       101 k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ..  ..........|......+++...+.  ++.+|.+|
T Consensus        64 ~~~ce~~p~~a~~iN~~~~~~la~~~~~~--~~~li~~S  100 (286)
T PF04321_consen   64 VDACEKNPEEAYAINVDATKNLAEACKER--GARLIHIS  100 (286)
T ss_dssp             HHHHHHSHHHHHHHHTHHHHHHHHHHHHC--T-EEEEEE
T ss_pred             HHhhhhChhhhHHHhhHHHHHHHHHHHHc--CCcEEEee
Confidence            11  1235556678899999999988865  45565554

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK06482 short chain dehydrogenase; Provisional

Probab=96.50  E-value=0.024  Score=53.43  Aligned_cols=112  Identities=13%  Similarity=0.010  Sum_probs=65.0

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCCh---hhh-------cCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQL---ENA-------LTGM   89 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~dl---~~a-------l~~A   89 (369)
                      ++|.|+||+|++|+.++..|+..+.  .+++.+.+...  ..++.... ...+..+. .-+|.   .++       +.+.
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~--~v~~~~r~~~~--~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   77 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGD--RVAATVRRPDA--LDDLKARY-GDRLWVLQLDVTDSAAVRAVVDRAFAALGRI   77 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC--EEEEEeCCHHH--HHHHHHhc-cCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4799999999999999999999887  88888876511  11121111 11222221 11222   222       3457


Q ss_pred             cEEEEcCCCCCCCC-C--C---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEec
Q 017551           90 DLVIIPAGVPRKPG-M--T---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLIS  137 (369)
Q Consensus        90 DiVii~ag~p~k~g-~--~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~t  137 (369)
                      |+||..+|...... +  +   -...+..|......+.+.+..+   ...+.++++|
T Consensus        78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~s  134 (276)
T PRK06482         78 DVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVS  134 (276)
T ss_pred             CEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEc
Confidence            99999998754221 1  1   2345567777666666665322   2234455554

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.49  E-value=0.011  Score=54.90  Aligned_cols=72  Identities=24%  Similarity=0.246  Sum_probs=46.7

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCChhhh-cCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQLENA-LTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~dl~~a-l~~ADiVii~a   96 (369)
                      |+|+|+|+ |.+|+++|..|...+.  +++++|.++..... -+.+.....-+.... ..+-|++| +.++|++|.+-
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~--~Vv~Id~d~~~~~~-~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t   74 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGH--NVVLIDRDEERVEE-FLADELDTHVVIGDATDEDVLEEAGIDDADAVVAAT   74 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCC--ceEEEEcCHHHHHH-HhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEee
Confidence            68999999 9999999999999998  99999998722111 012111011122211 11224444 68999999974

>PRK07774 short chain dehydrogenase; Provisional

Probab=96.49  E-value=0.037  Score=51.02  Aligned_cols=114  Identities=17%  Similarity=0.175  Sum_probs=66.5

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEE-eCCCChh---h-------hc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF-LGQPQLE---N-------AL   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~-~~t~dl~---~-------al   86 (369)
                      .+++.|+||+|++|..++..|+..+.  +|+++|.+..  .....++.+..  ..+..+ ..-+|.+   +       .+
T Consensus         6 ~k~vlItGasg~iG~~la~~l~~~g~--~vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (250)
T PRK07774          6 DKVAIVTGAAGGIGQAYAEALAREGA--SVVVADINAEGAERVAKQIVADG--GTAIAVQVDVSDPDSAKAMADATVSAF   81 (250)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999887  8999998752  22222332211  122111 1112221   1       12


Q ss_pred             CCCcEEEEcCCCCC----CC--CCCH---HHHHHHHHHHHHHHHHHHhhhC---CCeEEEEec
Q 017551           87 TGMDLVIIPAGVPR----KP--GMTR---DDLFNINAGIVRTLCEGIAKCC---PNATVNLIS  137 (369)
Q Consensus        87 ~~ADiVii~ag~p~----k~--g~~r---~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~t  137 (369)
                      ...|+||.++|...    .+  ..+.   ...+..|......+.+.+..+.   +.+.++++|
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~s  144 (250)
T PRK07774         82 GGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQS  144 (250)
T ss_pred             CCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEe
Confidence            46899999998632    11  1222   2345567666555555555442   234566655

>PRK07024 short chain dehydrogenase; Provisional

Probab=96.49  E-value=0.015  Score=54.34  Aligned_cols=111  Identities=23%  Similarity=0.174  Sum_probs=63.2

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------C
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------T   87 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-------~   87 (369)
                      ++|.|+||+|++|..++..|++.+.  +|+++|.+..  .....++...   .++..+. .-+|   +.+++       .
T Consensus         3 ~~vlItGas~gIG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~i~~~~~~~~~~~g   77 (257)
T PRK07024          3 LKVFITGASSGIGQALAREYARQGA--TLGLVARRTDALQAFAARLPKA---ARVSVYAADVRDADALAAAAADFIAAHG   77 (257)
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHhcccC---CeeEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            5899999999999999999999887  8999998752  2222222211   1233221 1122   22222       2


Q ss_pred             CCcEEEEcCCCCCCCC----CC---HHHHHHHHHHHHHH----HHHHHhhhCCCeEEEEec
Q 017551           88 GMDLVIIPAGVPRKPG----MT---RDDLFNINAGIVRT----LCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        88 ~ADiVii~ag~p~k~g----~~---r~~~~~~N~~i~~~----i~~~i~~~~p~a~viv~t  137 (369)
                      ..|++|..+|......    .+   ....+..|+.-...    +.+.+.+... +.+++++
T Consensus        78 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~-~~iv~is  137 (257)
T PRK07024         78 LPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARR-GTLVGIA  137 (257)
T ss_pred             CCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCC-CEEEEEe
Confidence            3699999988643211    12   22344555544433    4445554443 4455554

>PRK06181 short chain dehydrogenase; Provisional

Probab=96.48  E-value=0.033  Score=51.92  Aligned_cols=115  Identities=17%  Similarity=0.174  Sum_probs=67.4

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCCh---hhhc-------C
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQL---ENAL-------T   87 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~dl---~~al-------~   87 (369)
                      ++|.|+||+|++|+.++..|+.++.  +|+++|.+..  .....++....  ..+..+. .-+|.   .+++       .
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~--~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   77 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGA--QLVLAARNETRLASLAQELADHG--GEALVVPTDVSDAEACERLIEAAVARFG   77 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4799999999999999999998887  8999998752  22233343322  2333221 11222   2222       3


Q ss_pred             CCcEEEEcCCCCCCCC---C-CH---HHHHHHHHHHHHHHHHHHhhhC--CCeEEEEecCC
Q 017551           88 GMDLVIIPAGVPRKPG---M-TR---DDLFNINAGIVRTLCEGIAKCC--PNATVNLISNP  139 (369)
Q Consensus        88 ~ADiVii~ag~p~k~g---~-~r---~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tNP  139 (369)
                      +.|+||..+|......   . +.   ...+..|+.....+.+.+..+.  ..+.++++|..
T Consensus        78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~  138 (263)
T PRK06181         78 GIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSL  138 (263)
T ss_pred             CCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecc
Confidence            6899999988643211   1 22   2335667666666666554332  23456665543

>PRK05866 short chain dehydrogenase; Provisional

Probab=96.48  E-value=0.043  Score=52.67  Aligned_cols=76  Identities=20%  Similarity=0.282  Sum_probs=49.1

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-------   86 (369)
                      .++|.|+||+|++|..++..|+.++.  +|+++|.+.  ......++...  ...+..+. .-+|   ..+++       
T Consensus        40 ~k~vlItGasggIG~~la~~La~~G~--~Vi~~~R~~~~l~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  115 (293)
T PRK05866         40 GKRILLTGASSGIGEAAAEQFARRGA--TVVAVARREDLLDAVADRITRA--GGDAMAVPCDLSDLDAVDALVADVEKRI  115 (293)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            36899999999999999999999887  999999876  22222223211  11222221 1112   22233       


Q ss_pred             CCCcEEEEcCCCC
Q 017551           87 TGMDLVIIPAGVP   99 (369)
Q Consensus        87 ~~ADiVii~ag~p   99 (369)
                      .+.|+||..+|..
T Consensus       116 g~id~li~~AG~~  128 (293)
T PRK05866        116 GGVDILINNAGRS  128 (293)
T ss_pred             CCCCEEEECCCCC
Confidence            3789999998864

>PLN02256 arogenate dehydrogenase

Probab=96.47  E-value=0.022  Score=55.45  Aligned_cols=65  Identities=20%  Similarity=0.238  Sum_probs=45.6

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhc-CCCcEEEEcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL-TGMDLVIIPA   96 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al-~~ADiVii~a   96 (369)
                      +.+||+|||+ |.+|+.++..+...+.  +|+.+|.+.....+.++     .  +..   .++.++.+ .++|+||++.
T Consensus        35 ~~~kI~IIG~-G~mG~slA~~L~~~G~--~V~~~d~~~~~~~a~~~-----g--v~~---~~~~~e~~~~~aDvVilav  100 (304)
T PLN02256         35 RKLKIGIVGF-GNFGQFLAKTFVKQGH--TVLATSRSDYSDIAAEL-----G--VSF---FRDPDDFCEEHPDVVLLCT  100 (304)
T ss_pred             CCCEEEEEee-CHHHHHHHHHHHhCCC--EEEEEECccHHHHHHHc-----C--Cee---eCCHHHHhhCCCCEEEEec
Confidence            4579999998 9999999999988775  89999987522222211     1  122   23455555 4799999984

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=96.47  E-value=0.022  Score=52.06  Aligned_cols=114  Identities=18%  Similarity=0.323  Sum_probs=64.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-------   86 (369)
                      .++|.|+||+|++|+.++..|..++.  +|.+++.+..  .....++...  ..++..+. .-+|   +.+++       
T Consensus         5 ~~~ilItGasg~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (246)
T PRK05653          5 GKTALVTGASRGIGRAIALRLAADGA--KVVIYDSNEEAAEALAAELRAA--GGEARVLVFDVSDEAAVRALIEAAVEAF   80 (246)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999887  7999998762  2222333321  12222211 1112   22223       


Q ss_pred             CCCcEEEEcCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEec
Q 017551           87 TGMDLVIIPAGVPRK-P--GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLIS  137 (369)
Q Consensus        87 ~~ADiVii~ag~p~k-~--g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~t  137 (369)
                      ...|.||..+|.-.. +  ..+.   ...+..|......+.+.+..+   .....++++|
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~s  140 (246)
T PRK05653         81 GALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNIS  140 (246)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEC
Confidence            346999999875211 1  1222   234556666666555555432   2223455555

>PLN02996 fatty acyl-CoA reductase

Probab=96.47  E-value=0.055  Score=56.13  Aligned_cols=109  Identities=17%  Similarity=0.145  Sum_probs=69.3

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHh-CCCCcEEEEEeCCCc----h-hHHHHhhccc----------------CCCeEEE
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKI-NPLVSVLHLYDVVNT----P-GVTADISHMD----------------TGAVVRG   75 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~-~~~~~el~L~D~~~~----~-g~~~dL~~~~----------------~~~~v~~   75 (369)
                      -+.+.|.|+||+|++|+.++..|+. .+-+.+|+++.....    . ....++....                ...++..
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            3456899999999999999987765 455678888776541    1 1111111100                0134444


Q ss_pred             EeCC-C---------C-hhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh
Q 017551           76 FLGQ-P---------Q-LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC  127 (369)
Q Consensus        76 ~~~t-~---------d-l~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~  127 (369)
                      ..+. +         + +.+.++++|+||..|+... ...........|+.....+.+.+.+.
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~~a~~~  150 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTN-FDERYDVALGINTLGALNVLNFAKKC  150 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHHhCCCEEEECccccC-CcCCHHHHHHHHHHHHHHHHHHHHhc
Confidence            3321 1         1 3456689999999987543 23345667788999999998888764

>PLN02780 ketoreductase/ oxidoreductase

Probab=96.46  E-value=0.042  Score=53.67  Aligned_cols=115  Identities=16%  Similarity=0.212  Sum_probs=65.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe--CCCC-------hhhhcC-
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL--GQPQ-------LENALT-   87 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~--~t~d-------l~~al~-   87 (369)
                      ...+.|+||+|++|..++..|+..|.  +|+++|++.  ......++.......++..+.  -+++       +.+.+. 
T Consensus        53 g~~~lITGAs~GIG~alA~~La~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~  130 (320)
T PLN02780         53 GSWALVTGPTDGIGKGFAFQLARKGL--NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG  130 (320)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence            46899999999999999999999987  899999987  233344443321111222111  0112       122333 


Q ss_pred             -CCcEEEEcCCCCCC---C--CCCH---HHHHHHHHHHHHHHHHH----HhhhCCCeEEEEec
Q 017551           88 -GMDLVIIPAGVPRK---P--GMTR---DDLFNINAGIVRTLCEG----IAKCCPNATVNLIS  137 (369)
Q Consensus        88 -~ADiVii~ag~p~k---~--g~~r---~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~t  137 (369)
                       |.|++|..||....   +  ..+.   ...+..|......+.+.    +.+. ..+.++++|
T Consensus       131 ~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~g~IV~iS  192 (320)
T PLN02780        131 LDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIINIG  192 (320)
T ss_pred             CCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-CCcEEEEEe
Confidence             45589999986421   1  1222   23456665544444444    4333 345566654

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=96.46  E-value=0.025  Score=52.58  Aligned_cols=114  Identities=21%  Similarity=0.282  Sum_probs=65.4

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------c
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENA-------L   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l   86 (369)
                      .+++.|+||+|++|..++..|+..+.  ++++.|.+..  .....++.+..  ..+..+. .-+|   +.+.       +
T Consensus         9 ~k~~lItGas~giG~~ia~~L~~~G~--~vvl~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (254)
T PRK08085          9 GKNILITGSAQGIGFLLATGLAEYGA--EIIINDITAERAELAVAKLRQEG--IKAHAAPFNVTHKQEVEAAIEHIEKDI   84 (254)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCC--EEEEEcCCHHHHHHHHHHHHhcC--CeEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            45899999999999999999999887  9999998762  22333343321  1222211 1122   1111       2


Q ss_pred             CCCcEEEEcCCCCC-CC--CCC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEec
Q 017551           87 TGMDLVIIPAGVPR-KP--GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLIS  137 (369)
Q Consensus        87 ~~ADiVii~ag~p~-k~--g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~t  137 (369)
                      ...|+||..+|... .+  ..+   ....+..|......+.+.+..+   ...+.++++|
T Consensus        85 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~is  144 (254)
T PRK08085         85 GPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINIC  144 (254)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEc
Confidence            45799999998632 11  122   2334566655544444444433   2335566654

>PRK07814 short chain dehydrogenase; Provisional

Probab=96.45  E-value=0.045  Score=51.28  Aligned_cols=116  Identities=16%  Similarity=0.188  Sum_probs=68.1

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCChh---hh-------
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQLE---NA-------   85 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~dl~---~a-------   85 (369)
                      +.+++.|+||+|++|..++..|+.++.  +|++.|.+..  .....++...  ...+..+. .-++.+   ++       
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   84 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGA--DVLIAARTESQLDEVAEQIRAA--GRRAHVVAADLAHPEATAGLAGQAVEA   84 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            346899999999999999999998887  9999998752  2223333221  12233221 122321   12       


Q ss_pred             cCCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHh----hhCCCeEEEEecC
Q 017551           86 LTGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIA----KCCPNATVNLISN  138 (369)
Q Consensus        86 l~~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~~i~~~i~----~~~p~a~viv~tN  138 (369)
                      +...|+||..||.....   ..+   ....+..|......+.+...    +..+.+.++++|.
T Consensus        85 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS  147 (263)
T PRK07814         85 FGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISS  147 (263)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEcc
Confidence            23689999998853211   122   23345566555555554443    3345566666654

>PRK09135 pteridine reductase; Provisional

Probab=96.44  E-value=0.037  Score=50.78  Aligned_cols=104  Identities=18%  Similarity=0.179  Sum_probs=62.3

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHhhcccCCCeEEEEe-CCCC---hhhhc------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~---~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al------   86 (369)
                      .++|.|+||+|++|++++..|+.++.  +|+++|...   ......++.+... ..+..+. .-+|   +..++      
T Consensus         6 ~~~vlItGa~g~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~   82 (249)
T PRK09135          6 AKVALITGGARRIGAAIARTLHAAGY--RVAIHYHRSAAEADALAAELNALRP-GSAAALQADLLDPDALPELVAACVAA   82 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhhcC-CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            36899999999999999999999887  999999754   2222333433211 1122211 1122   22233      


Q ss_pred             -CCCcEEEEcCCCCC--CCC-CC---HHHHHHHHHHHHHHHHHHHhh
Q 017551           87 -TGMDLVIIPAGVPR--KPG-MT---RDDLFNINAGIVRTLCEGIAK  126 (369)
Q Consensus        87 -~~ADiVii~ag~p~--k~g-~~---r~~~~~~N~~i~~~i~~~i~~  126 (369)
                       .+.|+||..+|...  ... .+   ..+.+..|+.....+.+.+..
T Consensus        83 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~  129 (249)
T PRK09135         83 FGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAP  129 (249)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHH
Confidence             35799999988522  111 12   244566777766666666554

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.42  E-value=0.012  Score=50.05  Aligned_cols=35  Identities=29%  Similarity=0.396  Sum_probs=30.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ..||+|+|+ |.+|+.++..|+..|. .++.|+|-+.
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv-~~i~lvD~d~   36 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGV-GKITLVDDDI   36 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTT-SEEEEEESSB
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCC-CceeecCCcc
Confidence            469999999 9999999999998885 6999999875

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK05650 short chain dehydrogenase; Provisional

Probab=96.42  E-value=0.037  Score=52.03  Aligned_cols=113  Identities=19%  Similarity=0.139  Sum_probs=64.7

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCCh---hhh-------cC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQL---ENA-------LT   87 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~dl---~~a-------l~   87 (369)
                      ++|.|+||+|++|+.++..|...+.  +|++.|.+..  .....++....  .++..+. .-+|.   .+.       +.
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~i~~~~~   76 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGW--RLALADVNEEGGEETLKLLREAG--GDGFYQRCDVRDYSQLTALAQACEEKWG   76 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999887  8999998762  22233343221  1222221 11222   222       24


Q ss_pred             CCcEEEEcCCCCCCC---CCCH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 017551           88 GMDLVIIPAGVPRKP---GMTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        88 ~ADiVii~ag~p~k~---g~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      ..|+||..+|.....   ..+.   ...+..|..    +.+.+.+.+.+.. .+.++++|.
T Consensus        77 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS  136 (270)
T PRK05650         77 GIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-SGRIVNIAS  136 (270)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEECC
Confidence            689999998864321   1222   224456643    4444444455443 345666553

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.42  E-value=0.02  Score=52.30  Aligned_cols=35  Identities=29%  Similarity=0.490  Sum_probs=31.1

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ..||.|+|+ |.+|+.++..|+..|. .+|.|+|.+.
T Consensus        21 ~~~VlviG~-GglGs~ia~~La~~Gv-~~i~lvD~d~   55 (202)
T TIGR02356        21 NSHVLIIGA-GGLGSPAALYLAGAGV-GTIVIVDDDH   55 (202)
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHcCC-CeEEEecCCE
Confidence            359999999 9999999999999884 5999999884

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK05876 short chain dehydrogenase; Provisional

Probab=96.41  E-value=0.041  Score=52.28  Aligned_cols=115  Identities=18%  Similarity=0.169  Sum_probs=66.0

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------c
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------L   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l   86 (369)
                      .+.+.|+||+|++|+.++..|+..|.  +|++.|.+.  ......++...  ..++..+. .-+|   +.+.       +
T Consensus         6 ~k~vlVTGas~gIG~ala~~La~~G~--~Vv~~~r~~~~l~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   81 (275)
T PRK05876          6 GRGAVITGGASGIGLATGTEFARRGA--RVVLGDVDKPGLRQAVNHLRAE--GFDVHGVMCDVRHREEVTHLADEAFRLL   81 (275)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            34799999999999999999999987  899999876  22223334321  12233221 1122   2222       2


Q ss_pred             CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHH----HHHHHHhhhCCCeEEEEecC
Q 017551           87 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVR----TLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i~~----~i~~~i~~~~p~a~viv~tN  138 (369)
                      ...|+||..||.....   ..+.   ...+..|.....    .+.+.+.+....+.++++|.
T Consensus        82 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS  143 (275)
T PRK05876         82 GHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTAS  143 (275)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence            3579999999874311   1222   233456654444    44444444443455666653

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.41  E-value=0.068  Score=51.42  Aligned_cols=121  Identities=18%  Similarity=0.244  Sum_probs=81.3

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe----CCCChh-------hhc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL----GQPQLE-------NAL   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~----~t~dl~-------~al   86 (369)
                      .+.|.|+|||.+||.++|+.++..|.  .++|+....  ++.+..++.......++....    ..++.+       ..+
T Consensus        12 ~kvVvITGASsGIG~~lA~~la~~G~--~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f   89 (282)
T KOG1205|consen   12 GKVVLITGASSGIGEALAYELAKRGA--KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF   89 (282)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHhCCC--ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence            45889999999999999999999997  788888765  333334454433211122211    112222       356


Q ss_pred             CCCcEEEEcCCCCCCCC-CC------HHHHHHHH----HHHHHHHHHHHhhhCCCeEEEEecCCCCChh
Q 017551           87 TGMDLVIIPAGVPRKPG-MT------RDDLFNIN----AGIVRTLCEGIAKCCPNATVNLISNPVNSTV  144 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~g-~~------r~~~~~~N----~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t  144 (369)
                      .+.|+.|..||+.+ .+ .+      ....++.|    +-..+...+.+.+.. ++.|++++...+.+.
T Consensus        90 g~vDvLVNNAG~~~-~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSiaG~~~  156 (282)
T KOG1205|consen   90 GRVDVLVNNAGISL-VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIAGKMP  156 (282)
T ss_pred             CCCCEEEecCcccc-ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEeccccccC
Confidence            89999999999988 43 11      22344555    677888888888877 898888887776554

>PRK06841 short chain dehydrogenase; Provisional

Probab=96.41  E-value=0.027  Score=52.25  Aligned_cols=113  Identities=20%  Similarity=0.351  Sum_probs=65.1

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------c
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFL-GQPQ---LENA-------L   86 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l   86 (369)
                      +.++|.|+||+|++|+.++..|++.+.  +|++.+.+.. .....++..    ..+..+. .-++   +.+.       +
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~   87 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGA--RVALLDRSEDVAEVAAQLLG----GNAKGLVCDVSDSQSVEAAVAAVISAF   87 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHhhC----CceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            346899999999999999999999887  8999998752 112222221    1111111 1122   2222       2


Q ss_pred             CCCcEEEEcCCCCC-CCC--CCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEec
Q 017551           87 TGMDLVIIPAGVPR-KPG--MTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLIS  137 (369)
Q Consensus        87 ~~ADiVii~ag~p~-k~g--~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~t  137 (369)
                      ...|+||..+|... .+-  .+.   ...+..|..-...+.+.+..+   ...+.++++|
T Consensus        88 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~s  147 (255)
T PRK06841         88 GRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLA  147 (255)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEc
Confidence            36799999988643 111  111   234566666555555555433   1245566655

>PRK07069 short chain dehydrogenase; Validated

Probab=96.40  E-value=0.075  Score=48.91  Aligned_cols=114  Identities=23%  Similarity=0.279  Sum_probs=66.8

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCC-C--chhHHHHhhcccCCCe---EEEE-eCCCChh-------hhcC
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-N--TPGVTADISHMDTGAV---VRGF-LGQPQLE-------NALT   87 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~-~--~~g~~~dL~~~~~~~~---v~~~-~~t~dl~-------~al~   87 (369)
                      ||.|+||+|++|..++..|+..+.  +|++.|.+ .  ......++........   +... +...++.       +.+.
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   78 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGA--KVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMG   78 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            589999999999999999999887  89999987 3  2222223322111111   1111 1111121       2235


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 017551           88 GMDLVIIPAGVPRKP---GMT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        88 ~ADiVii~ag~p~k~---g~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      ..|+||..+|.....   ..+   ....+..|+.    ..+.+.+.+.+... ..++++|.
T Consensus        79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~ii~~ss  138 (251)
T PRK07069         79 GLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQP-ASIVNISS  138 (251)
T ss_pred             CccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCC-cEEEEecC
Confidence            689999999864321   112   2334566766    66777777776543 44555553

>PRK09291 short chain dehydrogenase; Provisional

Probab=96.39  E-value=0.076  Score=49.12  Aligned_cols=76  Identities=17%  Similarity=0.204  Sum_probs=48.1

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHhhcccCCCeEEEEe----CCCChhhhcC-CCcEEE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFL----GQPQLENALT-GMDLVI   93 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~~~~~~v~~~~----~t~dl~~al~-~ADiVi   93 (369)
                      ++|.|+||+|++|+.++..|++.+.  ++++.+.+...  ....+....  ...+....    ...++..++. +.|+||
T Consensus         3 ~~vlVtGasg~iG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~id~vi   78 (257)
T PRK09291          3 KTILITGAGSGFGREVALRLARKGH--NVIAGVQIAPQVTALRAEAARR--GLALRVEKLDLTDAIDRAQAAEWDVDVLL   78 (257)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc--CCcceEEEeeCCCHHHHHHHhcCCCCEEE
Confidence            3799999999999999999999887  88888876521  111111111  11222211    1123334444 899999


Q ss_pred             EcCCCCC
Q 017551           94 IPAGVPR  100 (369)
Q Consensus        94 i~ag~p~  100 (369)
                      ..+|.+.
T Consensus        79 ~~ag~~~   85 (257)
T PRK09291         79 NNAGIGE   85 (257)
T ss_pred             ECCCcCC
Confidence            9998653

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=96.39  E-value=0.039  Score=50.66  Aligned_cols=113  Identities=19%  Similarity=0.286  Sum_probs=65.6

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEeC-CCC---hhhhc-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLG-QPQ---LENAL-------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~~-t~d---l~~al-------   86 (369)
                      .++|.|+||+|++|..++..|..++.  +|++++.+..  .....++...  ..++..+.+ -+|   +.+.+       
T Consensus         6 ~~~ilItGasg~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (251)
T PRK12826          6 GRVALVTGAARGIGRAIAVRLAADGA--EVIVVDICGDDAAATAELVEAA--GGKARARQVDVRDRAALKAAVAAGVEDF   81 (251)
T ss_pred             CCEEEEcCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999887  8999998752  2222333322  123333221 112   22222       


Q ss_pred             CCCcEEEEcCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHH----hhhCCCeEEEEec
Q 017551           87 TGMDLVIIPAGVPRK-P--GMTR---DDLFNINAGIVRTLCEGI----AKCCPNATVNLIS  137 (369)
Q Consensus        87 ~~ADiVii~ag~p~k-~--g~~r---~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~t  137 (369)
                      ...|+||..+|.... +  ..+.   ...+..|+.-...+.+.+    .+.. ...++++|
T Consensus        82 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~s  141 (251)
T PRK12826         82 GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG-GGRIVLTS  141 (251)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEe
Confidence            368999999876431 1  2222   234556665555555444    3333 34455554

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.38  E-value=0.035  Score=54.31  Aligned_cols=92  Identities=21%  Similarity=0.287  Sum_probs=61.1

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      +.++|+|+|. |.||+.++..|..-|.  +|..||......           ..+..+....++++.+++||+|++..  
T Consensus       135 ~g~tvgIvG~-G~IG~~vA~~l~afG~--~V~~~~~~~~~~-----------~~~~~~~~~~~l~e~l~~aDvvv~~l--  198 (312)
T PRK15469        135 EDFTIGILGA-GVLGSKVAQSLQTWGF--PLRCWSRSRKSW-----------PGVQSFAGREELSAFLSQTRVLINLL--  198 (312)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCCCCC-----------CCceeecccccHHHHHhcCCEEEECC--
Confidence            4579999999 9999999999997777  999999753110           00111111346889999999999984  


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      |..         ..|-.++.  .+.++...|++++|+++
T Consensus       199 Plt---------~~T~~li~--~~~l~~mk~ga~lIN~a  226 (312)
T PRK15469        199 PNT---------PETVGIIN--QQLLEQLPDGAYLLNLA  226 (312)
T ss_pred             CCC---------HHHHHHhH--HHHHhcCCCCcEEEECC
Confidence            321         12222232  23444455889888886

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=96.38  E-value=0.011  Score=53.20  Aligned_cols=76  Identities=20%  Similarity=0.233  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEE--eCCCChhhhcCCCcEEEE
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF--LGQPQLENALTGMDLVII   94 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~--~~t~dl~~al~~ADiVii   94 (369)
                      +.+++.|+||+|.+|+.++..|...+.  ++.+++.+..  .....++.+.. ...+...  ....++.++++++|+||.
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~--~V~l~~R~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~diVi~  103 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGA--RVVLVGRDLERAQKAADSLRARF-GEGVGAVETSDDAARAAAIKGADVVFA  103 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhhc-CCcEEEeeCCCHHHHHHHHhcCCEEEE
Confidence            457999999889999999999988775  9999998752  22222232211 1223321  112334578999999888


Q ss_pred             cCC
Q 017551           95 PAG   97 (369)
Q Consensus        95 ~ag   97 (369)
                      +..
T Consensus       104 at~  106 (194)
T cd01078         104 AGA  106 (194)
T ss_pred             CCC
Confidence            753

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK07832 short chain dehydrogenase; Provisional

Probab=96.38  E-value=0.11  Score=48.81  Aligned_cols=115  Identities=19%  Similarity=0.148  Sum_probs=65.8

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCC-e-EEEEeCCCCh----------hhhc
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGA-V-VRGFLGQPQL----------ENAL   86 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~-~-v~~~~~t~dl----------~~al   86 (369)
                      +++.|+||+|++|..++..|+..+.  +|++++.+.  ......++....... . +...  -+|.          .+.+
T Consensus         1 k~vlItGas~giG~~la~~la~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D--~~~~~~~~~~~~~~~~~~   76 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGA--ELFLTDRDADGLAQTVADARALGGTVPEHRALD--ISDYDAVAAFAADIHAAH   76 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEee--CCCHHHHHHHHHHHHHhc
Confidence            3799999999999999999998886  899999875  222233333221111 1 1111  1121          1223


Q ss_pred             CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHH----hhhCCCeEEEEecCC
Q 017551           87 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGI----AKCCPNATVNLISNP  139 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tNP  139 (369)
                      ...|+||..+|.....   ..+.   ...+..|..-...+.+.+    .+....+.++++|-.
T Consensus        77 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~  139 (272)
T PRK07832         77 GSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSA  139 (272)
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccc
Confidence            5689999999864321   1222   334566665555555443    332334566666543

>PF03949 Malic_M: Malic enzyme, NAD binding domain; InterPro: IPR012302 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e

Probab=96.35  E-value=0.014  Score=55.34  Aligned_cols=106  Identities=21%  Similarity=0.280  Sum_probs=71.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhC----CCC-----cEEEEEeCCC--chhH------HHHhhcccCCCeEEEEeCCCCh
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKIN----PLV-----SVLHLYDVVN--TPGV------TADISHMDTGAVVRGFLGQPQL   82 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~----~~~-----~el~L~D~~~--~~g~------~~dL~~~~~~~~v~~~~~t~dl   82 (369)
                      ..||++.|| |..|..++.+|...    |+-     +++.|+|.+.  ..+.      ...+.+...  ....   ..++
T Consensus        25 d~riv~~GA-GsAg~gia~ll~~~~~~~G~~~~eA~~~i~lvD~~Gll~~~r~~l~~~~~~~a~~~~--~~~~---~~~L   98 (255)
T PF03949_consen   25 DQRIVFFGA-GSAGIGIARLLVAAMVREGLSEEEARKRIWLVDSKGLLTDDREDLNPHKKPFARKTN--PEKD---WGSL   98 (255)
T ss_dssp             G-EEEEEB--SHHHHHHHHHHHHHHHCTTS-HHHHHTTEEEEETTEEEBTTTSSHSHHHHHHHBSSS--TTT-----SSH
T ss_pred             HcEEEEeCC-ChhHHHHHHHHHHHHHHhcCCHHHHhccEEEEeccceEeccCccCChhhhhhhccCc--cccc---ccCH
Confidence            469999999 99999999877654    663     7899999986  1221      122222211  1111   1478


Q ss_pred             hhhcCCC--cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC--ChhH
Q 017551           83 ENALTGM--DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN--STVP  145 (369)
Q Consensus        83 ~~al~~A--DiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~--~~t~  145 (369)
                      .++++++  |++|=+.|.|   |           -+-+++.+.|.++|++.+|+=.|||..  -+++
T Consensus        99 ~eav~~~kPtvLIG~S~~~---g-----------~ft~evv~~Ma~~~erPIIF~LSNPt~~aE~~p  151 (255)
T PF03949_consen   99 LEAVKGAKPTVLIGLSGQG---G-----------AFTEEVVRAMAKHNERPIIFPLSNPTPKAECTP  151 (255)
T ss_dssp             HHHHHCH--SEEEECSSST---T-----------SS-HHHHHHCHHHSSSEEEEE-SSSCGGSSS-H
T ss_pred             HHHHHhcCCCEEEEecCCC---C-----------cCCHHHHHHHhccCCCCEEEECCCCCCcccCCH
Confidence            9999999  9999887654   3           234588899999999999988999987  4554

g. carbon dioxide released from the reaction may be used in sugar production during the Calvin cycle of photosynthesis []. There are 3 forms of the enzyme []: an NAD-dependent form that decarboxylates oxaloacetate; an NAD-dependent form that does not decarboxylate oxalo-acetate; and an NADPH-dependent form []. Other proteins known to be similar to malic enzymes are the Escherichia coli scfA protein; an enzyme from Zea mays (Maize), formerly thought to be cinnamyl-alcohol dehydrogenase []; and the hypothetical Saccharomyces cerevisiae protein YKL029c. Studies on the duck liver malic enzyme reveals that it can be alkylated by bromopyruvate, resulting in the loss of oxidative decarboxylation and the subsequent enhancement of pyruvate reductase activity []. The alkylated form is able to bind NADPH but not L-malate, indicating impaired substrate-or divalent metal ion-binding in the active site []. Sequence analysis has highlighted a cysteine residue as the point of alkylation, suggesting that it may play an important role in the activity of the enzyme [], although it is absent in the sequences from some species. There are three well conserved regions in the enzyme sequences. Two of them seem to be involved in the binding NAD or NADP. The significance of the third one, located in the central part of the enzymes, is not yet known.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 2DVM_B 1WW8_A 3NV9_A 1PJ2_A 1PJL_B 1GZ3_A 1PJ4_A 1PJ3_C 1EFL_A 1EFK_B ....

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.35  E-value=0.025  Score=55.13  Aligned_cols=99  Identities=19%  Similarity=0.264  Sum_probs=64.7

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      ..++|+|+|+ |.+|..++..+...+ ..+|.++|.+..+  ..+..+.     ..+..   .+++.+++.++|+||.+.
T Consensus       177 ~~~~V~ViGa-G~iG~~~a~~L~~~g-~~~V~v~~r~~~ra~~la~~~g-----~~~~~---~~~~~~~l~~aDvVi~at  246 (311)
T cd05213         177 KGKKVLVIGA-GEMGELAAKHLAAKG-VAEITIANRTYERAEELAKELG-----GNAVP---LDELLELLNEADVVISAT  246 (311)
T ss_pred             cCCEEEEECc-HHHHHHHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHcC-----CeEEe---HHHHHHHHhcCCEEEECC
Confidence            4689999999 999999998888754 3489999987522  2222221     12211   235678899999999997


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHH-Hhhh-CCCeEEEEecCCCCCh
Q 017551           97 GVPRKPGMTRDDLFNINAGIVRTLCEG-IAKC-CPNATVNLISNPVNST  143 (369)
Q Consensus        97 g~p~k~g~~r~~~~~~N~~i~~~i~~~-i~~~-~p~a~viv~tNPv~~~  143 (369)
                      +.|..                .++... +... ....+++-+++|-|+=
T Consensus       247 ~~~~~----------------~~~~~~~~~~~~~~~~~viDlavPrdi~  279 (311)
T cd05213         247 GAPHY----------------AKIVERAMKKRSGKPRLIVDLAVPRDIE  279 (311)
T ss_pred             CCCch----------------HHHHHHHHhhCCCCCeEEEEeCCCCCCc
Confidence            66531                111111 1111 2456888999999865

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=96.34  E-value=0.024  Score=52.62  Aligned_cols=117  Identities=14%  Similarity=0.145  Sum_probs=67.6

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCC---Chhhhc------
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQP---QLENAL------   86 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~---dl~~al------   86 (369)
                      ..++|.|+||+|++|+.++..|+..+.  +|+++|.+.  ......++....  .++.... .-+   ++..++      
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGA--HVLVNGRNAATLEAAVAALRAAG--GAAEALAFDIADEEAVAAAFARIDAE   85 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHh
Confidence            356899999999999999999998887  999999976  223333343211  1222221 112   222222      


Q ss_pred             -CCCcEEEEcCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCC
Q 017551           87 -TGMDLVIIPAGVPRK-P--GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISNP  139 (369)
Q Consensus        87 -~~ADiVii~ag~p~k-~--g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP  139 (369)
                       ...|+||..+|.... +  ..+.   ...+..|+.-...+++.+.++   ...+.++++|..
T Consensus        86 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~  148 (256)
T PRK06124         86 HGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSI  148 (256)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeec
Confidence             345899999886321 1  1222   234566666555555444332   234556666654

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=96.34  E-value=0.026  Score=52.59  Aligned_cols=115  Identities=21%  Similarity=0.300  Sum_probs=66.0

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------cCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LTG   88 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l~~   88 (369)
                      .+++.|+||+|+||..++..|+..|.  +|++++.+........+...  ..++..+. .-+|   ..+.       +..
T Consensus         8 ~k~~lItGas~gIG~aia~~l~~~G~--~vv~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   83 (251)
T PRK12481          8 GKVAIITGCNTGLGQGMAIGLAKAGA--DIVGVGVAEAPETQAQVEAL--GRKFHFITADLIQQKDIDSIVSQAVEVMGH   83 (251)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEecCchHHHHHHHHHHc--CCeEEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence            45899999999999999999999988  89999876532222222221  12222211 1122   2222       245


Q ss_pred             CcEEEEcCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 017551           89 MDLVIIPAGVPRKP---GMT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        89 ADiVii~ag~p~k~---g~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      .|++|..+|.....   ..+   ....+..|+.    +.+.+.+.+.+....+.|++++.
T Consensus        84 iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS  143 (251)
T PRK12481         84 IDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIAS  143 (251)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCC
Confidence            79999999874321   112   2334556644    34445555544433466766654

>PRK07890 short chain dehydrogenase; Provisional

Probab=96.34  E-value=0.061  Score=49.83  Aligned_cols=116  Identities=16%  Similarity=0.163  Sum_probs=67.3

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhh-------h
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LEN-------A   85 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~-------a   85 (369)
                      ..++|.|+||+|+||+.++..|+.++.  +|+++|.+..  .....++....  .++..+. .-+|   ++.       .
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGA--DVVLAARTAERLDEVAAEIDDLG--RRALAVPTDITDEDQCANLVALALER   79 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHHhC--CceEEEecCCCCHHHHHHHHHHHHHH
Confidence            356899999999999999999999998  9999998762  22223332211  1222211 1122   211       2


Q ss_pred             cCCCcEEEEcCCCCC--CC--CCCH---HHHHHHHHHHHHHHHHHHhhhC--CCeEEEEecC
Q 017551           86 LTGMDLVIIPAGVPR--KP--GMTR---DDLFNINAGIVRTLCEGIAKCC--PNATVNLISN  138 (369)
Q Consensus        86 l~~ADiVii~ag~p~--k~--g~~r---~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tN  138 (369)
                      +...|+||..+|...  ++  ..+.   ...+..|+.-...+.+.+..+-  ....++++|.
T Consensus        80 ~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS  141 (258)
T PRK07890         80 FGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINS  141 (258)
T ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEec
Confidence            346899999998632  22  2222   3345566655555555554331  1245666653

>PRK06179 short chain dehydrogenase; Provisional

Probab=96.34  E-value=0.041  Score=51.60  Aligned_cols=111  Identities=15%  Similarity=0.143  Sum_probs=62.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEE-eCCCChhhhcC-------CCcE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQLENALT-------GMDL   91 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~-~~t~dl~~al~-------~ADi   91 (369)
                      ..+|.|+||+|++|+.++..|+..+.  +|++.+.+......  ..+.   ..+... +...+++++++       ..|+
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~--~V~~~~r~~~~~~~--~~~~---~~~~~D~~d~~~~~~~~~~~~~~~g~~d~   76 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGY--RVFGTSRNPARAAP--IPGV---ELLELDVTDDASVQAAVDEVIARAGRIDV   76 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCC--EEEEEeCChhhccc--cCCC---eeEEeecCCHHHHHHHHHHHHHhCCCCCE
Confidence            35899999999999999999999887  89999987521110  0010   111111 11123334443       4699


Q ss_pred             EEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHH----HhhhCCCeEEEEecC
Q 017551           92 VIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEG----IAKCCPNATVNLISN  138 (369)
Q Consensus        92 Vii~ag~p~k~g---~~---r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tN  138 (369)
                      ||..+|......   .+   ....+..|..-...+.+.    +.+.. .+.++++|.
T Consensus        77 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~isS  132 (270)
T PRK06179         77 LVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-SGRIINISS  132 (270)
T ss_pred             EEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEECC
Confidence            999998753221   11   234455565444444443    44443 345666554

>PRK05884 short chain dehydrogenase; Provisional

Probab=96.33  E-value=0.019  Score=52.78  Aligned_cols=34  Identities=15%  Similarity=0.220  Sum_probs=31.1

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ||+.|+||+|++|+.++..|...+.  +|+++|.+.
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~--~v~~~~r~~   34 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGH--KVTLVGARR   34 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence            5899999999999999999998887  899999875

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=96.33  E-value=0.03  Score=50.44  Aligned_cols=104  Identities=19%  Similarity=0.166  Sum_probs=62.3

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  100 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p~  100 (369)
                      |||+||||+|.+|+.++...+.+|+  |+.-+=.+..+-.+  +.. .+-.+-..+ ..+.+.+++.|-|+||.+-|.+.
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGH--eVTAivRn~~K~~~--~~~-~~i~q~Dif-d~~~~a~~l~g~DaVIsA~~~~~   74 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGH--EVTAIVRNASKLAA--RQG-VTILQKDIF-DLTSLASDLAGHDAVISAFGAGA   74 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCC--eeEEEEeChHhccc--ccc-ceeeccccc-ChhhhHhhhcCCceEEEeccCCC
Confidence            7999999999999999999999999  88888777522111  010 000111122 13445678999999999866543


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551          101 KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus       101 k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                       ++.  +.+   -.+....+...++.. -...++++.
T Consensus        75 -~~~--~~~---~~k~~~~li~~l~~a-gv~RllVVG  104 (211)
T COG2910          75 -SDN--DEL---HSKSIEALIEALKGA-GVPRLLVVG  104 (211)
T ss_pred             -CCh--hHH---HHHHHHHHHHHHhhc-CCeeEEEEc
Confidence             221  111   122244444555433 345566664

>PLN02712 arogenate dehydrogenase

Probab=96.33  E-value=0.027  Score=60.64  Aligned_cols=68  Identities=16%  Similarity=0.131  Sum_probs=47.2

Q ss_pred             CCCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhc-CCCcEEEE
Q 017551           16 GGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL-TGMDLVII   94 (369)
Q Consensus        16 ~~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al-~~ADiVii   94 (369)
                      ..++++||+|||. |.+|..++..|...+.  +|..+|.+.....+.++       .+..   .+++.+.+ ++||+||+
T Consensus        48 ~~~~~~kIgIIG~-G~mG~slA~~L~~~G~--~V~~~dr~~~~~~A~~~-------Gv~~---~~d~~e~~~~~aDvViL  114 (667)
T PLN02712         48 DNTTQLKIAIIGF-GNYGQFLAKTLISQGH--TVLAHSRSDHSLAARSL-------GVSF---FLDPHDLCERHPDVILL  114 (667)
T ss_pred             ccCCCCEEEEEcc-CHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHc-------CCEE---eCCHHHHhhcCCCEEEE
Confidence            3455689999998 9999999999998886  89999987422111111       1222   23455534 57999999


Q ss_pred             cC
Q 017551           95 PA   96 (369)
Q Consensus        95 ~a   96 (369)
                      +.
T Consensus       115 av  116 (667)
T PLN02712        115 CT  116 (667)
T ss_pred             cC
Confidence            84

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.32  E-value=0.037  Score=51.03  Aligned_cols=35  Identities=34%  Similarity=0.472  Sum_probs=31.1

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ..||+|+|+ |.+|+.++..|+..|. .++.|+|.+.
T Consensus        28 ~~~V~ViG~-GglGs~ia~~La~~Gv-g~i~lvD~D~   62 (212)
T PRK08644         28 KAKVGIAGA-GGLGSNIAVALARSGV-GNLKLVDFDV   62 (212)
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHcCC-CeEEEEeCCE
Confidence            459999999 9999999999998885 5899999983

>PRK06924 short chain dehydrogenase; Provisional

Probab=96.32  E-value=0.036  Score=51.26  Aligned_cols=34  Identities=18%  Similarity=0.167  Sum_probs=30.8

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ++|.|+||+|++|+.++..|++++.  +|++++.+.
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~--~V~~~~r~~   35 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGT--HVISISRTE   35 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCC--EEEEEeCCc
Confidence            4799999999999999999999887  899999865

>PRK07063 short chain dehydrogenase; Provisional

Probab=96.31  E-value=0.076  Score=49.45  Aligned_cols=116  Identities=22%  Similarity=0.251  Sum_probs=66.0

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-------   86 (369)
                      .+.+.|+||+|++|..++..|+..|.  +|+++|.+.  ......++.......++..+. .-+|   +.+++       
T Consensus         7 ~k~vlVtGas~gIG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (260)
T PRK07063          7 GKVALVTGAAQGIGAAIARAFAREGA--AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF   84 (260)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            45899999999999999999999987  899999876  223333343211112232221 1122   22222       


Q ss_pred             CCCcEEEEcCCCCCC-C-C-CCH---HHHHHHHHHHH----HHHHHHHhhhCCCeEEEEecC
Q 017551           87 TGMDLVIIPAGVPRK-P-G-MTR---DDLFNINAGIV----RTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        87 ~~ADiVii~ag~p~k-~-g-~~r---~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tN  138 (369)
                      ...|++|..+|.... + . .+.   ...+..|+...    +.+.+.+.+. ..+.|+++|-
T Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS  145 (260)
T PRK07063         85 GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVER-GRGSIVNIAS  145 (260)
T ss_pred             CCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhh-CCeEEEEECC
Confidence            368999999986421 1 1 122   23344555444    4444444433 3456666653

>PRK06057 short chain dehydrogenase; Provisional

Probab=96.31  E-value=0.023  Score=52.90  Aligned_cols=35  Identities=23%  Similarity=0.259  Sum_probs=31.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      .++|.|+||+|++|..++..+++.+.  +|+++|.+.
T Consensus         7 ~~~vlItGasggIG~~~a~~l~~~G~--~v~~~~r~~   41 (255)
T PRK06057          7 GRVAVITGGGSGIGLATARRLAAEGA--TVVVGDIDP   41 (255)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCC--EEEEEeCCH
Confidence            45899999999999999999999887  899999875

>PRK08278 short chain dehydrogenase; Provisional

Probab=96.30  E-value=0.17  Score=47.76  Aligned_cols=116  Identities=19%  Similarity=0.231  Sum_probs=65.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch---------hHHHHhhcccCCCeEEEEe-C---CCChhhhc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP---------GVTADISHMDTGAVVRGFL-G---QPQLENAL   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~---------g~~~dL~~~~~~~~v~~~~-~---t~dl~~al   86 (369)
                      .+++.|+||+|++|+.++..|++++.  +|+++|.+...         ..+.++...  ..++..+. .   +.++.+.+
T Consensus         6 ~k~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~   81 (273)
T PRK08278          6 GKTLFITGASRGIGLAIALRAARDGA--NIVIAAKTAEPHPKLPGTIHTAAEEIEAA--GGQALPLVGDVRDEDQVAAAV   81 (273)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEecccccccchhhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHH
Confidence            45899999999999999999999887  89999986411         112223221  11222211 1   12222233


Q ss_pred             -------CCCcEEEEcCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCC
Q 017551           87 -------TGMDLVIIPAGVPRK-P--GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISNP  139 (369)
Q Consensus        87 -------~~ADiVii~ag~p~k-~--g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP  139 (369)
                             ...|+||..+|.... +  ..+.   ...+..|+.-...+.+.+..+   ...+.++++|-+
T Consensus        82 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~  150 (273)
T PRK08278         82 AKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPP  150 (273)
T ss_pred             HHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCc
Confidence                   367999999986321 1  2232   223455655444444444332   234666666643

>PRK06128 oxidoreductase; Provisional

Probab=96.30  E-value=0.051  Score=52.15  Aligned_cols=115  Identities=23%  Similarity=0.272  Sum_probs=68.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc----hhHHHHhhcccCCCeEEEEe-CCCC---hhh-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT----PGVTADISHMDTGAVVRGFL-GQPQ---LEN-------   84 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~----~g~~~dL~~~~~~~~v~~~~-~t~d---l~~-------   84 (369)
                      .++|.|+||+|++|..++..|+..+.  +|++.+.+..    ......+...  ..++..+. .-+|   .++       
T Consensus        55 ~k~vlITGas~gIG~~~a~~l~~~G~--~V~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~  130 (300)
T PRK06128         55 GRKALITGADSGIGRATAIAFAREGA--DIALNYLPEEEQDAAEVVQLIQAE--GRKAVALPGDLKDEAFCRQLVERAVK  130 (300)
T ss_pred             CCEEEEecCCCcHHHHHHHHHHHcCC--EEEEEeCCcchHHHHHHHHHHHHc--CCeEEEEecCCCCHHHHHHHHHHHHH
Confidence            36899999999999999999999887  8888776431    1122222221  12222221 1122   112       


Q ss_pred             hcCCCcEEEEcCCCCC--CC--CCC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 017551           85 ALTGMDLVIIPAGVPR--KP--GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  138 (369)
Q Consensus        85 al~~ADiVii~ag~p~--k~--g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN  138 (369)
                      .+...|++|..+|...  .+  ..+   ....+..|+.-...+++.+..+. +.+.++++|.
T Consensus       131 ~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS  192 (300)
T PRK06128        131 ELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGS  192 (300)
T ss_pred             HhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECC
Confidence            2346899999998642  22  122   34456778777767777766553 3456666654

>PRK12827 short chain dehydrogenase; Provisional

Probab=96.28  E-value=0.078  Score=48.58  Aligned_cols=102  Identities=21%  Similarity=0.335  Sum_probs=61.5

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc------hhHHHHhhcccCCCeEEEEeC-CCC---hhhhc---
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT------PGVTADISHMDTGAVVRGFLG-QPQ---LENAL---   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~------~g~~~dL~~~~~~~~v~~~~~-t~d---l~~al---   86 (369)
                      .++|.|+||+|++|+.++..|+.++.  ++++++....      .....++...  ...+..+.+ -+|   +++++   
T Consensus         6 ~~~ilItGasg~iG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~   81 (249)
T PRK12827          6 SRRVLITGGSGGLGRAIAVRLAADGA--DVIVLDIHPMRGRAEADAVAAGIEAA--GGKALGLAFDVRDFAATRAALDAG   81 (249)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--eEEEEcCcccccHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHH
Confidence            46999999999999999999999887  8899886431      1111122211  122322211 122   22222   


Q ss_pred             ----CCCcEEEEcCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHHh
Q 017551           87 ----TGMDLVIIPAGVPRK-P--GMTR---DDLFNINAGIVRTLCEGIA  125 (369)
Q Consensus        87 ----~~ADiVii~ag~p~k-~--g~~r---~~~~~~N~~i~~~i~~~i~  125 (369)
                          ...|+||..+|.... +  ..+.   ...+..|......+++.+.
T Consensus        82 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  130 (249)
T PRK12827         82 VEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAAL  130 (249)
T ss_pred             HHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHH
Confidence                468999999986442 1  1222   3345677777777777665

>PRK07576 short chain dehydrogenase; Provisional

Probab=96.27  E-value=0.053  Score=50.96  Aligned_cols=117  Identities=17%  Similarity=0.190  Sum_probs=66.4

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-C---CCChhhhc-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-G---QPQLENAL-------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~---t~dl~~al-------   86 (369)
                      .++|.|+||+|++|+.++..|+..+.  +|+++|.+..  .....++....  .++..+. .   .+++.+++       
T Consensus         9 ~k~ilItGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~i~~~~~~~~~~~   84 (264)
T PRK07576          9 GKNVVVVGGTSGINLGIAQAFARAGA--NVAVASRSQEKVDAAVAQLQQAG--PEGLGVSADVRDYAAVEAAFAQIADEF   84 (264)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhC--CceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999998887  8999998752  22222333211  1222111 1   11222222       


Q ss_pred             CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhh--CCCeEEEEecCCC
Q 017551           87 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC--CPNATVNLISNPV  140 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i~~~i~~~i~~~--~p~a~viv~tNPv  140 (369)
                      ...|+||..+|.....   ..+.   ...+..|..-...+.+.+...  .+++.++++|...
T Consensus        85 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~  146 (264)
T PRK07576         85 GPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQ  146 (264)
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChh
Confidence            3579999988753211   1222   223456655555555444332  1346677776543

>PRK06197 short chain dehydrogenase; Provisional

Probab=96.27  E-value=0.075  Score=51.05  Aligned_cols=117  Identities=22%  Similarity=0.155  Sum_probs=67.1

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHhhcccCCCeEEEEe-CCCCh---hhh-------
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFL-GQPQL---ENA-------   85 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~~~~~~v~~~~-~t~dl---~~a-------   85 (369)
                      +.++|.|+||+|+||..++..|+..+.  +|++++.+...  ....++........+..+. .-+|.   .++       
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~--~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   92 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGA--HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAA   92 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh
Confidence            456899999999999999999999887  89999987522  1222333211112233221 11222   111       


Q ss_pred             cCCCcEEEEcCCCCCCCC-C---CHHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 017551           86 LTGMDLVIIPAGVPRKPG-M---TRDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        86 l~~ADiVii~ag~p~k~g-~---~r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      +...|+||..||....+. .   .-...+..|...    .+.+.+.+.+.. .+.|+++|.
T Consensus        93 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS  152 (306)
T PRK06197         93 YPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP-GSRVVTVSS  152 (306)
T ss_pred             CCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEECC
Confidence            236899999998632211 1   112334555444    566666665443 355666653

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=96.26  E-value=0.04  Score=53.42  Aligned_cols=114  Identities=13%  Similarity=0.049  Sum_probs=65.1

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-------   86 (369)
                      .++|.|+||+|+||..++..|+..+.  +|++.+.+..  .....++...  ...+..+. .-+|   ..+++       
T Consensus         6 ~k~vlVTGas~gIG~~~a~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   81 (322)
T PRK07453          6 KGTVIITGASSGVGLYAAKALAKRGW--HVIMACRNLKKAEAAAQELGIP--PDSYTIIHIDLGDLDSVRRFVDDFRALG   81 (322)
T ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhhcc--CCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence            45899999999999999999999886  8999998762  2222333211  12233221 1122   22222       


Q ss_pred             CCCcEEEEcCCCCCC----CCCCH---HHHHHHHHHH----HHHHHHHHhhhCC-CeEEEEec
Q 017551           87 TGMDLVIIPAGVPRK----PGMTR---DDLFNINAGI----VRTLCEGIAKCCP-NATVNLIS  137 (369)
Q Consensus        87 ~~ADiVii~ag~p~k----~g~~r---~~~~~~N~~i----~~~i~~~i~~~~p-~a~viv~t  137 (369)
                      ...|+||..||....    ...+.   ...+..|...    .+.+.+.+.+... .+.|+++|
T Consensus        82 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vs  144 (322)
T PRK07453         82 KPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILG  144 (322)
T ss_pred             CCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEc
Confidence            248999999986321    12232   3345666644    4444444544332 24566554

>PRK05867 short chain dehydrogenase; Provisional

Probab=96.26  E-value=0.072  Score=49.44  Aligned_cols=114  Identities=20%  Similarity=0.216  Sum_probs=65.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhh-------hc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LEN-------AL   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~-------al   86 (369)
                      .+.+.|+||+|++|..++..|+..|.  +|++.|.+.  ......++.+..  .++..+. .-+|   ..+       .+
T Consensus         9 ~k~vlVtGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (253)
T PRK05867          9 GKRALITGASTGIGKRVALAYVEAGA--QVAIAARHLDALEKLADEIGTSG--GKVVPVCCDVSQHQQVTSMLDQVTAEL   84 (253)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            45899999999999999999999987  899999876  222233333221  2222221 1122   222       23


Q ss_pred             CCCcEEEEcCCCCCC-C--CCCH---HHHHHHHHHHHHHHHH----HHhhhCCCeEEEEec
Q 017551           87 TGMDLVIIPAGVPRK-P--GMTR---DDLFNINAGIVRTLCE----GIAKCCPNATVNLIS  137 (369)
Q Consensus        87 ~~ADiVii~ag~p~k-~--g~~r---~~~~~~N~~i~~~i~~----~i~~~~p~a~viv~t  137 (369)
                      ...|++|..+|.... +  ..+.   ...+..|+.-...+.+    .+.+....+.+++++
T Consensus        85 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~s  145 (253)
T PRK05867         85 GGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTA  145 (253)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEEC
Confidence            478999999886432 1  1222   2334566544444444    443333335565554

>PRK13243 glyoxylate reductase; Reviewed

Probab=96.26  E-value=0.023  Score=55.96  Aligned_cols=92  Identities=23%  Similarity=0.278  Sum_probs=59.7

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      ..++|+|||. |.||+.++..+...+.  +|..||........  ...   .  +.    ..++.+.+++||+|++..  
T Consensus       149 ~gktvgIiG~-G~IG~~vA~~l~~~G~--~V~~~d~~~~~~~~--~~~---~--~~----~~~l~ell~~aDiV~l~l--  212 (333)
T PRK13243        149 YGKTIGIIGF-GRIGQAVARRAKGFGM--RILYYSRTRKPEAE--KEL---G--AE----YRPLEELLRESDFVSLHV--  212 (333)
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCC--EEEEECCCCChhhH--HHc---C--CE----ecCHHHHHhhCCEEEEeC--
Confidence            3579999999 9999999999987776  89999986422111  111   1  11    135778899999999984  


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      |..+.         +-.++.+  +.+...-|++++|+++
T Consensus       213 P~t~~---------T~~~i~~--~~~~~mk~ga~lIN~a  240 (333)
T PRK13243        213 PLTKE---------TYHMINE--ERLKLMKPTAILVNTA  240 (333)
T ss_pred             CCChH---------HhhccCH--HHHhcCCCCeEEEECc
Confidence            32211         1111211  2333334889999886

>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1

Probab=96.26  E-value=0.027  Score=53.99  Aligned_cols=120  Identities=22%  Similarity=0.257  Sum_probs=79.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhC----CC-----CcEEEEEeCCC--chh------HHHHhhcccCCCeEEEEeCCCCh
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKIN----PL-----VSVLHLYDVVN--TPG------VTADISHMDTGAVVRGFLGQPQL   82 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~----~~-----~~el~L~D~~~--~~g------~~~dL~~~~~~~~v~~~~~t~dl   82 (369)
                      ..||+|.|| |..|..++.+|...    |+     -..++++|.+.  ...      ....+.+..  .. .   ...+|
T Consensus        25 d~~iv~~GA-GsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~a~~~--~~-~---~~~~L   97 (279)
T cd05312          25 DQRILFLGA-GSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPFARKD--EE-K---EGKSL   97 (279)
T ss_pred             hcEEEEECc-CHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHHHHHHhhc--Cc-c---cCCCH
Confidence            469999999 99999999877653    54     26899999986  111      111122211  11 1   13579


Q ss_pred             hhhcC--CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC--ChhHHHHHHHHHhCCCC
Q 017551           83 ENALT--GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN--STVPIAAEVFKKAGTYD  158 (369)
Q Consensus        83 ~~al~--~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~--~~t~i~ae~~~~~~~~~  158 (369)
                      .++++  ++|++|=+.+.|   |           -+-+++.+.|.++|++.+|+-.|||..  -.++   +-.++.+  +
T Consensus        98 ~e~i~~v~ptvlIG~S~~~---g-----------~ft~evv~~Ma~~~~~PIIFaLSNPt~~~E~~p---e~a~~~t--~  158 (279)
T cd05312          98 LEVVKAVKPTVLIGLSGVG---G-----------AFTEEVVRAMAKSNERPIIFALSNPTSKAECTA---EDAYKWT--D  158 (279)
T ss_pred             HHHHHhcCCCEEEEeCCCC---C-----------CCCHHHHHHHHhcCCCCEEEECCCcCCccccCH---HHHHHhh--c
Confidence            99999  999988765544   3           123578889999999999998999986  3443   2223432  1


Q ss_pred             CCcEEEe
Q 017551          159 PKKLLGV  165 (369)
Q Consensus       159 ~~kviG~  165 (369)
                      -+.+|+.
T Consensus       159 G~ai~AT  165 (279)
T cd05312         159 GRALFAS  165 (279)
T ss_pred             CCEEEEe
Confidence            2458887

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.25  E-value=0.042  Score=50.41  Aligned_cols=116  Identities=18%  Similarity=0.254  Sum_probs=66.1

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEeC-CC---Chhhhc-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLG-QP---QLENAL-------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~~-t~---dl~~al-------   86 (369)
                      .+++.|+||+|++|..++..|+.++.  +|++.+.+..  .....++...  ..++..+.. -+   ++.+++       
T Consensus         7 ~~~vlVtG~sg~iG~~l~~~L~~~G~--~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (239)
T PRK07666          7 GKNALITGAGRGIGRAVAIALAKEGV--NVGLLARTEENLKAVAEEVEAY--GVKVVIATADVSDYEEVTAAIEQLKNEL   82 (239)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHh--CCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            35899999999999999999998887  8999998752  2222333321  123333221 12   222333       


Q ss_pred             CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCC
Q 017551           87 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISNP  139 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP  139 (369)
                      .+.|+||..+|.....   ..+.   ...+..|..-...+.+.+..+   ...+.++++|..
T Consensus        83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~  144 (239)
T PRK07666         83 GSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISST  144 (239)
T ss_pred             CCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcch
Confidence            3799999998864321   1222   233455655444444444332   223445555543

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=96.24  E-value=0.024  Score=51.95  Aligned_cols=113  Identities=20%  Similarity=0.329  Sum_probs=64.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhh-------hc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LEN-------AL   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~-------al   86 (369)
                      .+++.|+||+|++|+.++..|+.++.  .+++.+.+..  .....++.     ..+..+. .-++   +++       .+
T Consensus         6 ~~~vlItGa~g~iG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (245)
T PRK12936          6 GRKALVTGASGGIGEEIARLLHAQGA--IVGLHGTRVEKLEALAAELG-----ERVKIFPANLSDRDEVKALGQKAEADL   78 (245)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHhC-----CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            46999999999999999999999887  7888887642  22222221     1222211 1122   211       13


Q ss_pred             CCCcEEEEcCCCCCCC---C---CCHHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCC
Q 017551           87 TGMDLVIIPAGVPRKP---G---MTRDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNP  139 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~---g---~~r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP  139 (369)
                      ...|+||..+|.....   .   ......+..|+.....+++.+...   .+.+.++++|..
T Consensus        79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~  140 (245)
T PRK12936         79 EGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSV  140 (245)
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCH
Confidence            4689999999864321   1   112334566666554454444322   244566666643

>PRK05479 ketol-acid reductoisomerase; Provisional

Probab=96.24  E-value=0.033  Score=54.83  Aligned_cols=66  Identities=20%  Similarity=0.167  Sum_probs=46.7

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      +.+||+|||. |.+|++++..|+..+.  +++.++.......  +.....   .+..    .+..+++++||+|+++.
T Consensus        16 ~gktIgIIG~-GsmG~AlA~~L~~sG~--~Vvv~~r~~~~s~--~~A~~~---G~~~----~s~~eaa~~ADVVvLaV   81 (330)
T PRK05479         16 KGKKVAIIGY-GSQGHAHALNLRDSGV--DVVVGLREGSKSW--KKAEAD---GFEV----LTVAEAAKWADVIMILL   81 (330)
T ss_pred             CCCEEEEEee-HHHHHHHHHHHHHCCC--EEEEEECCchhhH--HHHHHC---CCee----CCHHHHHhcCCEEEEcC
Confidence            4579999999 9999999999999887  8888876542111  111111   1111    25678999999999984

>PRK09186 flagellin modification protein A; Provisional

Probab=96.23  E-value=0.048  Score=50.45  Aligned_cols=36  Identities=25%  Similarity=0.264  Sum_probs=32.0

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      +.++|.|+||+|++|..++..|...+.  +|++.+.+.
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~--~v~~~~r~~   38 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGG--IVIAADIDK   38 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEecCh
Confidence            346899999999999999999999887  899998875

>PRK15059 tartronate semialdehyde reductase; Provisional

Probab=96.23  E-value=0.018  Score=55.66  Aligned_cols=63  Identities=17%  Similarity=0.338  Sum_probs=46.0

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      |||+|||. |.+|++++..|...++  ++.++|++..   ..++...  .  ...   ..+..++.++||+||++.
T Consensus         1 m~Ig~IGl-G~MG~~ma~~L~~~G~--~v~v~~~~~~---~~~~~~~--g--~~~---~~s~~~~~~~advVi~~v   63 (292)
T PRK15059          1 MKLGFIGL-GIMGTPMAINLARAGH--QLHVTTIGPV---ADELLSL--G--AVS---VETARQVTEASDIIFIMV   63 (292)
T ss_pred             CeEEEEcc-CHHHHHHHHHHHHCCC--eEEEEeCCHh---HHHHHHc--C--Cee---cCCHHHHHhcCCEEEEeC
Confidence            58999999 9999999999999987  8899998752   1223221  1  111   134567789999999984

>PRK07478 short chain dehydrogenase; Provisional

Probab=96.21  E-value=0.094  Score=48.65  Aligned_cols=114  Identities=17%  Similarity=0.170  Sum_probs=66.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------c
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------L   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l   86 (369)
                      .+++.|+||+|++|..++..|+..|.  +|++.+.+.  ......++.+..  .++..+. .-++   .+++       +
T Consensus         6 ~k~~lItGas~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (254)
T PRK07478          6 GKVAIITGASSGIGRAAAKLFAREGA--KVVVGARRQAELDQLVAEIRAEG--GEAVALAGDVRDEAYAKALVALAVERF   81 (254)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            35899999999999999999999987  899999875  222333443321  2222221 1122   1222       2


Q ss_pred             CCCcEEEEcCCCC--CCC--CCCH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 017551           87 TGMDLVIIPAGVP--RKP--GMTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        87 ~~ADiVii~ag~p--~k~--g~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      ...|++|..+|..  ..+  ..+.   ...+..|..    ..+.+.+.+.+. ..+.++++|.
T Consensus        82 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~-~~~~iv~~sS  143 (254)
T PRK07478         82 GGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLAR-GGGSLIFTST  143 (254)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEEec
Confidence            3689999999863  222  2222   334566664    444555555443 3345665553

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.19  E-value=0.021  Score=55.15  Aligned_cols=96  Identities=22%  Similarity=0.257  Sum_probs=61.6

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      ...+|+|+|+ |.+|+.++..|...+.  +|.++|.+....  ..+....    ..... ..++.+.++++|+||.+.  
T Consensus       150 ~gk~v~IiG~-G~iG~avA~~L~~~G~--~V~v~~R~~~~~--~~~~~~g----~~~~~-~~~l~~~l~~aDiVint~--  217 (287)
T TIGR02853       150 HGSNVMVLGF-GRTGMTIARTFSALGA--RVFVGARSSADL--ARITEMG----LIPFP-LNKLEEKVAEIDIVINTI--  217 (287)
T ss_pred             CCCEEEEEcC-hHHHHHHHHHHHHCCC--EEEEEeCCHHHH--HHHHHCC----Ceeec-HHHHHHHhccCCEEEECC--
Confidence            3569999999 9999999999998886  899999875221  1111111    11111 235678889999999985  


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe-cCCCCC
Q 017551           99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI-SNPVNS  142 (369)
Q Consensus        99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~-tNPv~~  142 (369)
                      |.  +     ++  +    .   +.++...|+++++.+ ++|-++
T Consensus       218 P~--~-----ii--~----~---~~l~~~k~~aliIDlas~Pg~t  246 (287)
T TIGR02853       218 PA--L-----VL--T----A---DVLSKLPKHAVIIDLASKPGGT  246 (287)
T ss_pred             Ch--H-----Hh--C----H---HHHhcCCCCeEEEEeCcCCCCC
Confidence            31  0     11  1    1   123333467888876 688765

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK07574 formate dehydrogenase; Provisional

Probab=96.18  E-value=0.035  Score=55.80  Aligned_cols=94  Identities=19%  Similarity=0.263  Sum_probs=60.3

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      ..++|+|||. |.||+.++..|+.-+.  +|+.||.......   ....   ..+..   ..++++.++.||+|++..  
T Consensus       191 ~gktVGIvG~-G~IG~~vA~~l~~fG~--~V~~~dr~~~~~~---~~~~---~g~~~---~~~l~ell~~aDvV~l~l--  256 (385)
T PRK07574        191 EGMTVGIVGA-GRIGLAVLRRLKPFDV--KLHYTDRHRLPEE---VEQE---LGLTY---HVSFDSLVSVCDVVTIHC--  256 (385)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEECCCCCchh---hHhh---cCcee---cCCHHHHhhcCCEEEEcC--
Confidence            3579999999 9999999999987776  9999998652111   1110   01222   235789999999999984  


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      |..+         .+-.++.  .+.+....|.+++|+++
T Consensus       257 Plt~---------~T~~li~--~~~l~~mk~ga~lIN~a  284 (385)
T PRK07574        257 PLHP---------ETEHLFD--ADVLSRMKRGSYLVNTA  284 (385)
T ss_pred             CCCH---------HHHHHhC--HHHHhcCCCCcEEEECC
Confidence            3211         1112221  13333445788888886

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=96.18  E-value=0.071  Score=49.62  Aligned_cols=115  Identities=17%  Similarity=0.249  Sum_probs=66.3

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------CC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------TG   88 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-------~~   88 (369)
                      .+.+.|+||+|++|..++..|+..+.  +|+++|.........++...  ...+..+. .-+|   ..+.+       ..
T Consensus        10 ~k~~lItG~~~gIG~a~a~~l~~~G~--~vv~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   85 (253)
T PRK08993         10 GKVAVVTGCDTGLGQGMALGLAEAGC--DIVGINIVEPTETIEQVTAL--GRRFLSLTADLRKIDGIPALLERAVAEFGH   85 (253)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEecCcchHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            45899999999999999999999887  88888876532222333221  11222221 1122   22222       36


Q ss_pred             CcEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHH----HHHhhhCCCeEEEEecC
Q 017551           89 MDLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLC----EGIAKCCPNATVNLISN  138 (369)
Q Consensus        89 ADiVii~ag~p~k-~--g~~---r~~~~~~N~~i~~~i~----~~i~~~~p~a~viv~tN  138 (369)
                      .|++|..+|.... +  ..+   -...+..|......+.    +.+.+..+.+.++++|.
T Consensus        86 ~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS  145 (253)
T PRK08993         86 IDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIAS  145 (253)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECc
Confidence            8999999987531 1  122   2344566655444444    44444344576776654

>PTZ00431 pyrroline carboxylate reductase; Provisional

Probab=96.18  E-value=0.024  Score=53.74  Aligned_cols=61  Identities=13%  Similarity=0.213  Sum_probs=43.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCC--cEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLV--SVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~--~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      .|||+|||+ |.+|+.++..|...+..  .+++.+|.+...     +       .+..   ..+..++++++|+||++.
T Consensus         3 ~mkI~iIG~-G~mG~ai~~~l~~~~~~~~~~i~~~~~~~~~-----~-------~~~~---~~~~~~~~~~~D~Vilav   65 (260)
T PTZ00431          3 NIRVGFIGL-GKMGSALAYGIENSNIIGKENIYYHTPSKKN-----T-------PFVY---LQSNEELAKTCDIIVLAV   65 (260)
T ss_pred             CCEEEEECc-cHHHHHHHHHHHhCCCCCcceEEEECCChhc-----C-------CeEE---eCChHHHHHhCCEEEEEe
Confidence            479999999 99999999999887632  358888876421     0       1111   134456788999999983

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=96.18  E-value=0.078  Score=49.30  Aligned_cols=113  Identities=19%  Similarity=0.207  Sum_probs=63.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------cC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT   87 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l~   87 (369)
                      .+++.|+||+|++|+.++..|+..+.  +|+++|.+.. .....++...  ..++..+. .-+|   ..++       +.
T Consensus         8 ~k~vlVtGas~gIG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (260)
T PRK12823          8 GKVVVVTGAAQGIGRGVALRAAAEGA--RVVLVDRSELVHEVAAELRAA--GGEALALTADLETYAGAQAAMAAAVEAFG   83 (260)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCchHHHHHHHHHHhc--CCeEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999987  8999998752 2222223221  11222111 1122   1222       24


Q ss_pred             CCcEEEEcCCCCC--CC--CCCH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEec
Q 017551           88 GMDLVIIPAGVPR--KP--GMTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        88 ~ADiVii~ag~p~--k~--g~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      +.|++|..||...  .+  ..+.   ...+..|+-    +.+.+.+.+.+.. .+.|+++|
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~s  143 (260)
T PRK12823         84 RIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG-GGAIVNVS  143 (260)
T ss_pred             CCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEc
Confidence            6899999988532  22  1222   222344443    4455555555443 34566554

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=96.18  E-value=0.062  Score=49.49  Aligned_cols=115  Identities=13%  Similarity=0.205  Sum_probs=65.6

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHhhcccCCCeEEEEe-CCCC---hhhhc------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~---~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al------   86 (369)
                      .+.+.|+||+|++|+.++..|+..+.  ++++.+...   ......++.+..  .++..+. ..+|   +.+++      
T Consensus         6 ~~~~lItG~s~~iG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (247)
T PRK12935          6 GKVAIVTGGAKGIGKAITVALAQEGA--KVVINYNSSKEAAENLVNELGKEG--HDVYAVQADVSKVEDANRLVEEAVNH   81 (247)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCC--EEEEEcCCcHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            45899999999999999999998886  776655432   222223343221  2333221 1122   22223      


Q ss_pred             -CCCcEEEEcCCCCCCCC------CCHHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 017551           87 -TGMDLVIIPAGVPRKPG------MTRDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  138 (369)
Q Consensus        87 -~~ADiVii~ag~p~k~g------~~r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN  138 (369)
                       ...|+||..+|......      ..-.+.+..|..-...+.+.+..+   ...+.++++|.
T Consensus        82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS  143 (247)
T PRK12935         82 FGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISS  143 (247)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcc
Confidence             34799999988743221      112345667766666666655543   23445666554

>PRK06476 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.17  E-value=0.027  Score=53.17  Aligned_cols=68  Identities=18%  Similarity=0.238  Sum_probs=46.0

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCC-CcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~-~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      |||+|||+ |.+|+.++..|...+. ...+.++|.+...  ...+....  ..++.   .++..+++++||+||++.
T Consensus         1 m~IgiIG~-G~mG~aia~~L~~~g~~~~~i~v~~r~~~~--~~~l~~~~--~~~~~---~~~~~~~~~~aDvVilav   69 (258)
T PRK06476          1 MKIGFIGT-GAITEAMVTGLLTSPADVSEIIVSPRNAQI--AARLAERF--PKVRI---AKDNQAVVDRSDVVFLAV   69 (258)
T ss_pred             CeEEEECc-CHHHHHHHHHHHhCCCChheEEEECCCHHH--HHHHHHHc--CCceE---eCCHHHHHHhCCEEEEEe
Confidence            58999999 9999999999988764 4467788876422  22222211  11222   235567789999999985

>PRK08263 short chain dehydrogenase; Provisional

Probab=96.17  E-value=0.026  Score=53.24  Aligned_cols=111  Identities=15%  Similarity=0.030  Sum_probs=62.5

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------cCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LTGM   89 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l~~A   89 (369)
                      +.|.|+||+|++|+.++..|+.++.  +|++.|.+....  .++.+.. ...+..+. .-+|   +.+.       +...
T Consensus         4 k~vlItGasg~iG~~~a~~l~~~g~--~V~~~~r~~~~~--~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (275)
T PRK08263          4 KVWFITGASRGFGRAWTEAALERGD--RVVATARDTATL--ADLAEKY-GDRLLPLALDVTDRAAVFAAVETAVEHFGRL   78 (275)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC--EEEEEECCHHHH--HHHHHhc-cCCeeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4799999999999999999998887  899999875211  1111111 11111111 1122   2122       2467


Q ss_pred             cEEEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEec
Q 017551           90 DLVIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        90 DiVii~ag~p~k~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~t  137 (369)
                      |.||..+|.....   ..+   -...+..|+.-    .+.+.+.+++.... .++++|
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~iv~vs  135 (275)
T PRK08263         79 DIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSG-HIIQIS  135 (275)
T ss_pred             CEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC-EEEEEc
Confidence            9999999875321   112   23345566554    44555555554444 455554

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=96.17  E-value=0.014  Score=55.69  Aligned_cols=93  Identities=13%  Similarity=0.148  Sum_probs=60.4

Q ss_pred             EEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcC--CCcEEEEcCCCCCC-
Q 017551           25 ILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLVIIPAGVPRK-  101 (369)
Q Consensus        25 IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~--~ADiVii~ag~p~k-  101 (369)
                      |+||+|++|++++..|...+.  ++++.....    ..|+.+            ..++.+.++  ++|+||.+|+.... 
T Consensus         2 ItGa~GfiG~~l~~~L~~~g~--~v~~~~~~~----~~Dl~~------------~~~l~~~~~~~~~d~Vih~A~~~~~~   63 (306)
T PLN02725          2 VAGHRGLVGSAIVRKLEALGF--TNLVLRTHK----ELDLTR------------QADVEAFFAKEKPTYVILAAAKVGGI   63 (306)
T ss_pred             cccCCCcccHHHHHHHHhCCC--cEEEeeccc----cCCCCC------------HHHHHHHHhccCCCEEEEeeeeeccc
Confidence            899999999999999988775  444443211    112221            123444444  57999999876321 


Q ss_pred             --CCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe
Q 017551          102 --PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI  136 (369)
Q Consensus       102 --~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~  136 (369)
                        ......++...|......+++.+++....- +|++
T Consensus        64 ~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~i~~   99 (306)
T PLN02725         64 HANMTYPADFIRENLQIQTNVIDAAYRHGVKK-LLFL   99 (306)
T ss_pred             chhhhCcHHHHHHHhHHHHHHHHHHHHcCCCe-EEEe
Confidence              122345677889999999999999875443 3434

>PRK06138 short chain dehydrogenase; Provisional

Probab=96.16  E-value=0.1  Score=48.07  Aligned_cols=75  Identities=23%  Similarity=0.250  Sum_probs=48.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-------   86 (369)
                      .+++.|+||+|++|+.++..|+..+.  +|++++.+..  .....++.   ....+..+. .-+|   +.+++       
T Consensus         5 ~k~~lItG~sg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   79 (252)
T PRK06138          5 GRVAIVTGAGSGIGRATAKLFAREGA--RVVVADRDAEAAERVAAAIA---AGGRAFARQGDVGSAEAVEALVDFVAARW   79 (252)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCC--eEEEecCCHHHHHHHHHHHh---cCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999887  8999998752  22222222   112233221 1122   22222       


Q ss_pred             CCCcEEEEcCCCC
Q 017551           87 TGMDLVIIPAGVP   99 (369)
Q Consensus        87 ~~ADiVii~ag~p   99 (369)
                      .+.|+||..+|..
T Consensus        80 ~~id~vi~~ag~~   92 (252)
T PRK06138         80 GRLDVLVNNAGFG   92 (252)
T ss_pred             CCCCEEEECCCCC
Confidence            3789999998864

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.16  E-value=0.024  Score=50.12  Aligned_cols=58  Identities=26%  Similarity=0.436  Sum_probs=42.4

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      -+.++|+|||.|..+|.+++.+|..++.  .+.+.+.+                       |.++++.++.||+||.++|
T Consensus        34 l~Gk~v~VvGrs~~VG~Pla~lL~~~~a--tVt~~h~~-----------------------T~~l~~~~~~ADIVVsa~G   88 (160)
T PF02882_consen   34 LEGKKVVVVGRSNIVGKPLAMLLLNKGA--TVTICHSK-----------------------TKNLQEITRRADIVVSAVG   88 (160)
T ss_dssp             TTT-EEEEE-TTTTTHHHHHHHHHHTT---EEEEE-TT-----------------------SSSHHHHHTTSSEEEE-SS
T ss_pred             CCCCEEEEECCcCCCChHHHHHHHhCCC--eEEeccCC-----------------------CCcccceeeeccEEeeeec
Confidence            4567999999988999999999998865  55554432                       3567788999999999998


Q ss_pred             CCC
Q 017551           98 VPR  100 (369)
Q Consensus        98 ~p~  100 (369)
                      .|.
T Consensus        89 ~~~   91 (160)
T PF02882_consen   89 KPN   91 (160)
T ss_dssp             STT
T ss_pred             ccc
Confidence            773

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK07856 short chain dehydrogenase; Provisional

Probab=96.16  E-value=0.042  Score=50.97  Aligned_cols=109  Identities=13%  Similarity=0.137  Sum_probs=64.3

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-C---CCChhhhc-------CC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-G---QPQLENAL-------TG   88 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~---t~dl~~al-------~~   88 (369)
                      .+++.|+||+|++|+.++..|+..+.  +|+++|.+...    ...    ...+..+. .   ..++++.+       ..
T Consensus         6 ~k~~lItGas~gIG~~la~~l~~~g~--~v~~~~r~~~~----~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   75 (252)
T PRK07856          6 GRVVLVTGGTRGIGAGIARAFLAAGA--TVVVCGRRAPE----TVD----GRPAEFHAADVRDPDQVAALVDAIVERHGR   75 (252)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCChhh----hhc----CCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999887  89999987522    011    11122111 1   11223333       34


Q ss_pred             CcEEEEcCCCCC-CCC--CC---HHHHHHHHHHHHHHHHHHHhh----hCCCeEEEEecC
Q 017551           89 MDLVIIPAGVPR-KPG--MT---RDDLFNINAGIVRTLCEGIAK----CCPNATVNLISN  138 (369)
Q Consensus        89 ADiVii~ag~p~-k~g--~~---r~~~~~~N~~i~~~i~~~i~~----~~p~a~viv~tN  138 (369)
                      .|+||..+|... .+.  .+   ....+..|+.-...+.+.+..    ....+.++++|.
T Consensus        76 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS  135 (252)
T PRK07856         76 LDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGS  135 (252)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Confidence            599999988632 221  11   234456666655555555443    223356666654

>PRK07904 short chain dehydrogenase; Provisional

Probab=96.15  E-value=0.086  Score=49.33  Aligned_cols=115  Identities=14%  Similarity=0.128  Sum_probs=65.4

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCC-CCcEEEEEeCCCc---hhHHHHhhcccCCCeEEEEe----CCCChhhhc----
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL----GQPQLENAL----   86 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~-~~~el~L~D~~~~---~g~~~dL~~~~~~~~v~~~~----~t~dl~~al----   86 (369)
                      +.++|.|+||+|++|..++..++.++ .  .|++.+.+..   .....++.... ..++....    ...+.++.+    
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~--~V~~~~r~~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~   83 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPA--RVVLAALPDDPRRDAAVAQMKAAG-ASSVEVIDFDALDTDSHPKVIDAAF   83 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCC--eEEEEeCCcchhHHHHHHHHHhcC-CCceEEEEecCCChHHHHHHHHHHH
Confidence            34589999999999999999998874 6  8999998752   22333443321 11232221    111211112    


Q ss_pred             --CCCcEEEEcCCCCCCCCC---CH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEec
Q 017551           87 --TGMDLVIIPAGVPRKPGM---TR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        87 --~~ADiVii~ag~p~k~g~---~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~t  137 (369)
                        .+.|++|..+|.......   +.   .+.+..|..    +.+.+.+.+.+... +.++++|
T Consensus        84 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~-~~iv~is  145 (253)
T PRK07904         84 AGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGF-GQIIAMS  145 (253)
T ss_pred             hcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCC-ceEEEEe
Confidence              379999998887532211   11   123566654    33456666665543 4455554

>PRK12746 short chain dehydrogenase; Provisional

Probab=96.14  E-value=0.093  Score=48.52  Aligned_cols=114  Identities=18%  Similarity=0.200  Sum_probs=63.3

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEe-CCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC-----
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYD-VVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT-----   87 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D-~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~-----   87 (369)
                      .++|.|+||+|++|+.++..|+.++.  ++.+.+ .+..  .....++...  ...+..+. .-+|   +.++++     
T Consensus         6 ~~~ilItGasg~iG~~la~~l~~~G~--~v~i~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i~~~~~~~~~~   81 (254)
T PRK12746          6 GKVALVTGASRGIGRAIAMRLANDGA--LVAIHYGRNKQAADETIREIESN--GGKAFLIEADLNSIDGVKKLVEQLKNE   81 (254)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCcCCHHHHHHHHHHHHHH
Confidence            36899999999999999999998886  776654 3331  1222223211  11222221 1122   222222     


Q ss_pred             --------CCcEEEEcCCCCCCCC---CCH---HHHHHHHHHHHHHHHHHHhhhC-CCeEEEEec
Q 017551           88 --------GMDLVIIPAGVPRKPG---MTR---DDLFNINAGIVRTLCEGIAKCC-PNATVNLIS  137 (369)
Q Consensus        88 --------~ADiVii~ag~p~k~g---~~r---~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t  137 (369)
                              +.|+||.++|......   .+.   ...+..|+.....+.+.+.++. ..+.++++|
T Consensus        82 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~s  146 (254)
T PRK12746         82 LQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINIS  146 (254)
T ss_pred             hccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEEC
Confidence                    6899999998643211   121   3344567766666666665543 223455554

>PRK09242 tropinone reductase; Provisional

Probab=96.14  E-value=0.095  Score=48.70  Aligned_cols=117  Identities=17%  Similarity=0.164  Sum_probs=66.3

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC----------hhhh
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ----------LENA   85 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d----------l~~a   85 (369)
                      +.+++.|+||+|++|..++..|...+.  +|++.+.+.  ......++.......++.... .-++          ..+.
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGA--DVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDH   85 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            346899999999999999999999887  899999876  223333443321112232221 1111          1223


Q ss_pred             cCCCcEEEEcCCCCC-CC--CCCH---HHHHHHHHHHHHHH----HHHHhhhCCCeEEEEecC
Q 017551           86 LTGMDLVIIPAGVPR-KP--GMTR---DDLFNINAGIVRTL----CEGIAKCCPNATVNLISN  138 (369)
Q Consensus        86 l~~ADiVii~ag~p~-k~--g~~r---~~~~~~N~~i~~~i----~~~i~~~~p~a~viv~tN  138 (369)
                      +...|+||..+|... .+  ..+.   ...+..|+.-...+    .+.+.+. +.+.++++|-
T Consensus        86 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~~sS  147 (257)
T PRK09242         86 WDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQH-ASSAIVNIGS  147 (257)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCceEEEECc
Confidence            456899999998632 11  1222   22345555544444    4444433 3455666553

>PRK05993 short chain dehydrogenase; Provisional

Probab=96.14  E-value=0.025  Score=53.56  Aligned_cols=112  Identities=12%  Similarity=0.027  Sum_probs=64.0

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEE-eCCCChhhhc--------CCCcE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQLENAL--------TGMDL   91 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~-~~t~dl~~al--------~~ADi   91 (369)
                      ++|.|+||+|++|..++..|+..+.  +|++.+.+....  .++..... ..+... +...++++++        ...|+
T Consensus         5 k~vlItGasggiG~~la~~l~~~G~--~Vi~~~r~~~~~--~~l~~~~~-~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~   79 (277)
T PRK05993          5 RSILITGCSSGIGAYCARALQSDGW--RVFATCRKEEDV--AALEAEGL-EAFQLDYAEPESIAALVAQVLELSGGRLDA   79 (277)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHH--HHHHHCCc-eEEEccCCCHHHHHHHHHHHHHHcCCCccE
Confidence            4799999999999999999999887  899999875211  11221110 111111 0011122222        24699


Q ss_pred             EEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 017551           92 VIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        92 Vii~ag~p~k~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      ||..||.....   ..+   ....+..|+..    .+.+.+.+.+.. .+.|+++|-
T Consensus        80 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~-~g~iv~isS  135 (277)
T PRK05993         80 LFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG-QGRIVQCSS  135 (277)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC-CCEEEEECC
Confidence            99998864321   122   23345666554    556666665543 345666653

>PRK06701 short chain dehydrogenase; Provisional

Probab=96.14  E-value=0.051  Score=52.07  Aligned_cols=116  Identities=14%  Similarity=0.151  Sum_probs=70.6

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc---hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-----
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-----   86 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~---~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-----   86 (369)
                      +.++|.|+||+|++|..++..|+..+.  +|++++.+..   ......+...  ..++..+. .-+|   +.+.+     
T Consensus        45 ~~k~iLItGasggIG~~la~~l~~~G~--~V~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~i~~  120 (290)
T PRK06701         45 KGKVALITGGDSGIGRAVAVLFAKEGA--DIAIVYLDEHEDANETKQRVEKE--GVKCLLIPGDVSDEAFCKDAVEETVR  120 (290)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            346899999999999999999999887  8999998752   2222222211  12332221 1122   22222     


Q ss_pred             --CCCcEEEEcCCCCCC--C--CCCH---HHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecC
Q 017551           87 --TGMDLVIIPAGVPRK--P--GMTR---DDLFNINAGIVRTLCEGIAKC-CPNATVNLISN  138 (369)
Q Consensus        87 --~~ADiVii~ag~p~k--~--g~~r---~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tN  138 (369)
                        ...|+||..+|....  +  ..+.   ...+..|+.....+.+.+..+ .+.+.++++|.
T Consensus       121 ~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS  182 (290)
T PRK06701        121 ELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGS  182 (290)
T ss_pred             HcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEec
Confidence              357999999886321  1  1222   345677877777777777654 34556666654

>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating

Probab=96.14  E-value=0.019  Score=59.24  Aligned_cols=97  Identities=14%  Similarity=0.204  Sum_probs=59.0

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcc-cCCCeEEEEeCCCChhhhcCCCcEEEEcCCCCC
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM-DTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  100 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~-~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p~  100 (369)
                      +|+|||. |.+|++++..|+.++.  +|++||.+..+  +.++... .....+.......++.++++++|+|++..    
T Consensus         1 ~IG~IGL-G~MG~~mA~nL~~~G~--~V~v~drt~~~--~~~l~~~~~~g~~~~~~~s~~e~v~~l~~~dvIil~v----   71 (467)
T TIGR00873         1 DIGVIGL-AVMGSNLALNMADHGF--TVSVYNRTPEK--TDEFLAEHAKGKKIVGAYSIEEFVQSLERPRKIMLMV----   71 (467)
T ss_pred             CEEEEee-HHHHHHHHHHHHhcCC--eEEEEeCCHHH--HHHHHhhccCCCCceecCCHHHHHhhcCCCCEEEEEC----
Confidence            4899999 9999999999999998  99999997632  2223221 00111222211223334557899888874    


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecC
Q 017551          101 KPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISN  138 (369)
Q Consensus       101 k~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tN  138 (369)
                      ++|           +.+.++...+..+ .++.++|..||
T Consensus        72 ~~~-----------~~v~~Vi~~l~~~L~~g~iIID~gn   99 (467)
T TIGR00873        72 KAG-----------APVDAVINQLLPLLEKGDIIIDGGN   99 (467)
T ss_pred             CCc-----------HHHHHHHHHHHhhCCCCCEEEECCC
Confidence            112           2233344445444 36777888876

This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=96.13  E-value=0.019  Score=53.71  Aligned_cols=36  Identities=19%  Similarity=0.277  Sum_probs=32.2

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      +.+++.|+||+|++|+.++..|+..+.  +|++.|.+.
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~   39 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGA--RVAVLDKSA   39 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCH
Confidence            346999999999999999999999987  899999875

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.13  E-value=0.049  Score=49.71  Aligned_cols=101  Identities=19%  Similarity=0.304  Sum_probs=57.1

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc---hhHHHHhhcccCCCeEEEEeC-CCC---hhhh-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFLG-QPQ---LENA-------   85 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~---~g~~~dL~~~~~~~~v~~~~~-t~d---l~~a-------   85 (369)
                      .++|.|+||+|++|+.++..|.+++.  ++.+......   .....++...  ..++..+.. -+|   +.++       
T Consensus         6 ~~~vlItGasg~iG~~l~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (249)
T PRK12825          6 GRVALVTGAARGLGRAIALRLARAGA--DVVVHYRSDEEAAEELVEAVEAL--GRRAQAVQADVTDKAALEAAVAAAVER   81 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCCHHHHHHHHHHHHhc--CCceEEEECCcCCHHHHHHHHHHHHHH
Confidence            45899999999999999999999987  6666554431   1122222221  123332211 112   2222       


Q ss_pred             cCCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHH
Q 017551           86 LTGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGI  124 (369)
Q Consensus        86 l~~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i~~~i~~~i  124 (369)
                      +.+.|+||.++|.....   .++.   ...+..|+.....+.+.+
T Consensus        82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~  126 (249)
T PRK12825         82 FGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAV  126 (249)
T ss_pred             cCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHH
Confidence            24679999998853221   2222   334556666555555554

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=96.13  E-value=0.091  Score=48.39  Aligned_cols=113  Identities=17%  Similarity=0.204  Sum_probs=64.1

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC----------hhhhcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ----------LENALT   87 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d----------l~~al~   87 (369)
                      ++|.|+||+|++|+.++..|..++.  +|++++.+..  .....++...  ..++.... .-+|          ..+.+.
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGA--NVVVNDLGEAGAEAAAKVATDA--GGSVIYLVADVTKEDEIADMIAAAAAEFG   77 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4799999999999999999998887  8999998762  1122222221  12233221 1122          223356


Q ss_pred             CCcEEEEcCCCCCC-CC--CCH---HHHHHHHHHHHHHHHHHH----hhhCCCeEEEEecC
Q 017551           88 GMDLVIIPAGVPRK-PG--MTR---DDLFNINAGIVRTLCEGI----AKCCPNATVNLISN  138 (369)
Q Consensus        88 ~ADiVii~ag~p~k-~g--~~r---~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tN  138 (369)
                      +.|+||..+|.... +.  .+.   ...+..|..-...+.+.+    ++.. ...++++|.
T Consensus        78 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~~v~~ss  137 (255)
T TIGR01963        78 GLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG-WGRIINIAS  137 (255)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEEcc
Confidence            78999999886321 11  111   233445655544444444    4333 334555553

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK07074 short chain dehydrogenase; Provisional

Probab=96.12  E-value=0.062  Score=49.87  Aligned_cols=112  Identities=21%  Similarity=0.205  Sum_probs=62.7

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC-------
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT-------   87 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~-------   87 (369)
                      +++.|+||+|++|..++..|+..+.  +|+++|.+..  .....++.+    ..+..+. .-+|   +..++.       
T Consensus         3 k~ilItGat~~iG~~la~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (257)
T PRK07074          3 RTALVTGAAGGIGQALARRFLAAGD--RVLALDIDAAALAAFADALGD----ARFVPVACDLTDAASLAAALANAAAERG   76 (257)
T ss_pred             CEEEEECCcchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhcC----CceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4799999999999999999998886  8999998752  222223321    1222211 1122   222332       


Q ss_pred             CCcEEEEcCCCCCCCC---CCHH---HHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 017551           88 GMDLVIIPAGVPRKPG---MTRD---DLFNINAGIVRTLCEGIAKC---CPNATVNLISN  138 (369)
Q Consensus        88 ~ADiVii~ag~p~k~g---~~r~---~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN  138 (369)
                      +.|+||..+|......   .+..   ..+..|......+.+.+...   ...+.++++|.
T Consensus        77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS  136 (257)
T PRK07074         77 PVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGS  136 (257)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcc
Confidence            5899999988633211   1222   22345555444444444322   23455666654

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=96.11  E-value=0.054  Score=49.56  Aligned_cols=71  Identities=20%  Similarity=0.280  Sum_probs=45.3

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCC------hhhhcCCCcEEE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ------LENALTGMDLVI   93 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~d------l~~al~~ADiVi   93 (369)
                      |+|.|+||+|+||..++..|+.++....+++.+.+....    +.    ..++..+. .-+|      +.+.+...|+||
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~----~~----~~~~~~~~~Dls~~~~~~~~~~~~~~id~li   72 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD----FQ----HDNVQWHALDVTDEAEIKQLSEQFTQLDWLI   72 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc----cc----cCceEEEEecCCCHHHHHHHHHhcCCCCEEE
Confidence            589999999999999999998876433677766654211    11    11222111 1111      223457899999


Q ss_pred             EcCCCC
Q 017551           94 IPAGVP   99 (369)
Q Consensus        94 i~ag~p   99 (369)
                      ..+|..
T Consensus        73 ~~aG~~   78 (235)
T PRK09009         73 NCVGML   78 (235)
T ss_pred             ECCccc
Confidence            999875

>PRK06198 short chain dehydrogenase; Provisional

Probab=96.10  E-value=0.13  Score=47.79  Aligned_cols=115  Identities=15%  Similarity=0.193  Sum_probs=64.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcE-EEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCCh---hhh-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSV-LHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQL---ENA-------   85 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~e-l~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~dl---~~a-------   85 (369)
                      .++|.|+||+|++|+.++..|...+.  + |+++|.+..  .....++...  ...+..+. .-++.   .+.       
T Consensus         6 ~k~vlItGa~g~iG~~la~~l~~~G~--~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (260)
T PRK06198          6 GKVALVTGGTQGLGAAIARAFAERGA--AGLVICGRNAEKGEAQAAELEAL--GAKAVFVQADLSDVEDCRRVVAAADEA   81 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCC--CeEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999998886  6 999998752  2222233221  12332211 11222   222       


Q ss_pred             cCCCcEEEEcCCCCCCC---CCCHH---HHHHHHHHHHHHH----HHHHhhhCCCeEEEEecC
Q 017551           86 LTGMDLVIIPAGVPRKP---GMTRD---DLFNINAGIVRTL----CEGIAKCCPNATVNLISN  138 (369)
Q Consensus        86 l~~ADiVii~ag~p~k~---g~~r~---~~~~~N~~i~~~i----~~~i~~~~p~a~viv~tN  138 (369)
                      +.+.|+||..+|.+...   ..+..   ..+..|+.-...+    .+.+.+....+.++++|.
T Consensus        82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss  144 (260)
T PRK06198         82 FGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGS  144 (260)
T ss_pred             hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECC
Confidence            23689999999875422   12222   2345565444444    444444333455666553

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=96.10  E-value=0.079  Score=57.19  Aligned_cols=116  Identities=21%  Similarity=0.249  Sum_probs=65.1

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT------   87 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~------   87 (369)
                      .++|.|+||+|++|..++..|++.|.  +|++.|.+.  ......++........+..+. .-+|   ..++++      
T Consensus       414 gkvvLVTGasggIG~aiA~~La~~Ga--~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~  491 (676)
T TIGR02632       414 RRVAFVTGGAGGIGRETARRLAAEGA--HVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAY  491 (676)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            46899999999999999999999887  999999976  222223332111011122111 1122   223333      


Q ss_pred             -CCcEEEEcCCCCCC-C--CCCH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEec
Q 017551           88 -GMDLVIIPAGVPRK-P--GMTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        88 -~ADiVii~ag~p~k-~--g~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~t  137 (369)
                       +.|+||..||.... +  ..+.   ...+..|+.    +.+...+.+.+....+.++++|
T Consensus       492 g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iS  552 (676)
T TIGR02632       492 GGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIA  552 (676)
T ss_pred             CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence             68999999987432 1  1121   122233332    3445556665544444455554

>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme

Probab=96.09  E-value=0.011  Score=55.78  Aligned_cols=123  Identities=18%  Similarity=0.172  Sum_probs=80.3

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCC----C-----CcEEEEEeCCC--chhHHHHhhc--cc---CCCeEEEEeCCCChh
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINP----L-----VSVLHLYDVVN--TPGVTADISH--MD---TGAVVRGFLGQPQLE   83 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~----~-----~~el~L~D~~~--~~g~~~dL~~--~~---~~~~v~~~~~t~dl~   83 (369)
                      ..||+|.|| |..|..++.+|....    +     .++++++|...  ..+. .||.+  ..   + .+-.  ....+|.
T Consensus        25 d~riv~~GA-GsAg~gia~ll~~~~~~~Gls~e~A~~~i~~vD~~Gll~~~r-~~l~~~~~~~~~~-~~~~--~~~~~L~   99 (254)
T cd00762          25 EHKVLFNGA-GAAALGIANLIVXLXVKEGISKEEACKRIWXVDRKGLLVKNR-KETCPNEYHLARF-ANPE--RESGDLE   99 (254)
T ss_pred             hcEEEEECc-CHHHHHHHHHHHHHHHhcCCCHHHHhccEEEECCCCeEeCCC-CccCHHHHHHHHH-cCcc--cccCCHH
Confidence            469999999 999999998776533    2     24899999876  1111 01111  00   1 0101  1135799


Q ss_pred             hhcC--CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC--ChhHHHHHHHHHhCCCCC
Q 017551           84 NALT--GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN--STVPIAAEVFKKAGTYDP  159 (369)
Q Consensus        84 ~al~--~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~--~~t~i~ae~~~~~~~~~~  159 (369)
                      ++++  ++|++|=+.+.|   |           -+-+++.+.|.++|++.+|+=.|||..  -.++   |-.++.+  +-
T Consensus       100 eav~~~kptvlIG~S~~~---g-----------~ft~evv~~Ma~~~~~PIIFaLSNPt~~aE~tp---e~a~~~t--~G  160 (254)
T cd00762         100 DAVEAAKPDFLIGVSRVG---G-----------AFTPEVIRAXAEINERPVIFALSNPTSKAECTA---EEAYTAT--EG  160 (254)
T ss_pred             HHHHhhCCCEEEEeCCCC---C-----------CCCHHHHHHHhhcCCCCEEEECCCcCCccccCH---HHHHhhc--CC
Confidence            9999  999998876555   3           224578889999999999988899986  4443   3334443  23


Q ss_pred             CcEEEec
Q 017551          160 KKLLGVT  166 (369)
Q Consensus       160 ~kviG~t  166 (369)
                      +.+|+..
T Consensus       161 ~ai~AtG  167 (254)
T cd00762         161 RAIFASG  167 (254)
T ss_pred             CEEEEEC
Confidence            5788873

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut

>PRK06196 oxidoreductase; Provisional

Probab=96.08  E-value=0.061  Score=52.00  Aligned_cols=113  Identities=19%  Similarity=0.151  Sum_probs=65.0

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHhhcccCCCeEEEE-eCCCChhh-------hcCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGF-LGQPQLEN-------ALTGM   89 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~~~~~~v~~~-~~t~dl~~-------al~~A   89 (369)
                      .++|.|+||+|++|..++..|+..+.  +|++.+.+...  ....++....   -+... +...+.++       .+.+.
T Consensus        26 ~k~vlITGasggIG~~~a~~L~~~G~--~Vv~~~R~~~~~~~~~~~l~~v~---~~~~Dl~d~~~v~~~~~~~~~~~~~i  100 (315)
T PRK06196         26 GKTAIVTGGYSGLGLETTRALAQAGA--HVIVPARRPDVAREALAGIDGVE---VVMLDLADLESVRAFAERFLDSGRRI  100 (315)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhhhCe---EEEccCCCHHHHHHHHHHHHhcCCCC
Confidence            46899999999999999999999987  89999987522  1222222111   11111 00111111       12578


Q ss_pred             cEEEEcCCCCCCCC----CCHHHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 017551           90 DLVIIPAGVPRKPG----MTRDDLFNINAG----IVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        90 DiVii~ag~p~k~g----~~r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      |+||..||....+.    ......+..|..    +.+.+.+.+.+.. .+.|+++|-
T Consensus       101 D~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS  156 (315)
T PRK06196        101 DILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA-GARVVALSS  156 (315)
T ss_pred             CEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCeEEEECC
Confidence            99999998643221    112333455544    4555666665443 356666653

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=96.07  E-value=0.055  Score=58.11  Aligned_cols=91  Identities=20%  Similarity=0.192  Sum_probs=60.9

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhc--CCCcEEEE
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL--TGMDLVII   94 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al--~~ADiVii   94 (369)
                      ....|||.|+||+|++|++++..|...+.  ++.. ...       |+.+.            ..+...+  .+.|+||.
T Consensus       377 ~~~~mkiLVtGa~G~iG~~l~~~L~~~g~--~v~~-~~~-------~l~d~------------~~v~~~i~~~~pd~Vih  434 (668)
T PLN02260        377 GKPSLKFLIYGRTGWIGGLLGKLCEKQGI--AYEY-GKG-------RLEDR------------SSLLADIRNVKPTHVFN  434 (668)
T ss_pred             CCCCceEEEECCCchHHHHHHHHHHhCCC--eEEe-ecc-------ccccH------------HHHHHHHHhhCCCEEEE
Confidence            34568999999999999999999988775  5421 110       11110            0111222  26899999


Q ss_pred             cCCCCCCC--C---CCHHHHHHHHHHHHHHHHHHHhhhCC
Q 017551           95 PAGVPRKP--G---MTRDDLFNINAGIVRTLCEGIAKCCP  129 (369)
Q Consensus        95 ~ag~p~k~--g---~~r~~~~~~N~~i~~~i~~~i~~~~p  129 (369)
                      +|+....+  +   ....+.+..|+.....+++.+.+...
T Consensus       435 ~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~  474 (668)
T PLN02260        435 AAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGL  474 (668)
T ss_pred             CCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCC
Confidence            98764322  1   23566778999999999999998754

>PRK08219 short chain dehydrogenase; Provisional

Probab=96.07  E-value=0.062  Score=48.61  Aligned_cols=72  Identities=21%  Similarity=0.221  Sum_probs=46.2

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe----CCCChhhhcC---CCcEEE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL----GQPQLENALT---GMDLVI   93 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~----~t~dl~~al~---~ADiVi   93 (369)
                      ++|.|+||+|++|+.++..|+++ .  +|+++|.+...  ..++.+..  ..+..+.    ...++.++++   +.|+||
T Consensus         4 ~~vlVtG~~g~iG~~l~~~l~~~-~--~V~~~~r~~~~--~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~id~vi   76 (227)
T PRK08219          4 PTALITGASRGIGAAIARELAPT-H--TLLLGGRPAER--LDELAAEL--PGATPFPVDLTDPEAIAAAVEQLGRLDVLV   76 (227)
T ss_pred             CEEEEecCCcHHHHHHHHHHHhh-C--CEEEEeCCHHH--HHHHHHHh--ccceEEecCCCCHHHHHHHHHhcCCCCEEE
Confidence            58999999999999999999887 5  89999987522  11222111  1111111    1123444444   699999


Q ss_pred             EcCCCC
Q 017551           94 IPAGVP   99 (369)
Q Consensus        94 i~ag~p   99 (369)
                      .++|.+
T Consensus        77 ~~ag~~   82 (227)
T PRK08219         77 HNAGVA   82 (227)
T ss_pred             ECCCcC
Confidence            998864

>PRK06500 short chain dehydrogenase; Provisional

Probab=96.06  E-value=0.044  Score=50.43  Aligned_cols=101  Identities=21%  Similarity=0.213  Sum_probs=62.3

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCChh----------hhc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQLE----------NAL   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~dl~----------~al   86 (369)
                      .++|.|+||+|++|+.++..|+..+.  +|++++.+..  .....++     ..++..+. ..+|.+          +.+
T Consensus         6 ~k~vlItGasg~iG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (249)
T PRK06500          6 GKTALITGGTSGIGLETARQFLAEGA--RVAITGRDPASLEAARAEL-----GESALVIRADAGDVAAQKALAQALAEAF   78 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            35899999999999999999999987  8999998752  1111111     11222111 112221          223


Q ss_pred             CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhh
Q 017551           87 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC  127 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i~~~i~~~i~~~  127 (369)
                      .+.|+||..+|.....   ..+.   ...+..|+.....+.+.+..+
T Consensus        79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  125 (249)
T PRK06500         79 GRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPL  125 (249)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            4689999998864321   1122   345677777777777777643

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=96.06  E-value=0.042  Score=54.31  Aligned_cols=75  Identities=19%  Similarity=0.267  Sum_probs=50.0

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-----c----------------hhHH--HHhhcccCCCeEEEE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-----T----------------PGVT--ADISHMDTGAVVRGF   76 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-----~----------------~g~~--~dL~~~~~~~~v~~~   76 (369)
                      ..||.|||+ |.+|+.++..|+..|. .+|.|+|.+.     +                +..+  ..|........+..+
T Consensus        24 ~~~VlIiG~-GglGs~va~~La~aGv-g~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~  101 (338)
T PRK12475         24 EKHVLIVGA-GALGAANAEALVRAGI-GKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPV  101 (338)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCC-CEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEE
Confidence            459999999 9999999999999884 5999999874     0                0111  122222222344433


Q ss_pred             eC---CCChhhhcCCCcEEEEcC
Q 017551           77 LG---QPQLENALTGMDLVIIPA   96 (369)
Q Consensus        77 ~~---t~dl~~al~~ADiVii~a   96 (369)
                      ..   ..++++.++++|+||.+.
T Consensus       102 ~~~~~~~~~~~~~~~~DlVid~~  124 (338)
T PRK12475        102 VTDVTVEELEELVKEVDLIIDAT  124 (338)
T ss_pred             eccCCHHHHHHHhcCCCEEEEcC
Confidence            21   134567789999999984

>PRK08605 D-lactate dehydrogenase; Validated

Probab=96.06  E-value=0.028  Score=55.38  Aligned_cols=64  Identities=27%  Similarity=0.388  Sum_probs=45.8

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      +.++|+|||. |.+|+.++..|+. +..-+|..+|.......    ..     .+..   .+++++++++||+|++..
T Consensus       145 ~g~~VgIIG~-G~IG~~vA~~L~~-~~g~~V~~~d~~~~~~~----~~-----~~~~---~~~l~ell~~aDvIvl~l  208 (332)
T PRK08605        145 KDLKVAVIGT-GRIGLAVAKIFAK-GYGSDVVAYDPFPNAKA----AT-----YVDY---KDTIEEAVEGADIVTLHM  208 (332)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHh-cCCCEEEEECCCccHhH----Hh-----hccc---cCCHHHHHHhCCEEEEeC
Confidence            3579999999 9999999999853 33338999998652211    10     1111   346889999999999985

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=96.05  E-value=0.086  Score=48.98  Aligned_cols=115  Identities=18%  Similarity=0.189  Sum_probs=65.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCCh---hh-------hc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---EN-------AL   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl---~~-------al   86 (369)
                      .++|.|+||+|++|+.++..|...+.  ++++.|.+.  ......++.+..  .++..+. .-+|.   .+       .+
T Consensus        11 ~k~vlVtG~s~gIG~~la~~l~~~G~--~vv~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~   86 (255)
T PRK06113         11 GKCAIITGAGAGIGKEIAITFATAGA--SVVVSDINADAANHVVDEIQQLG--GQAFACRCDITSEQELSALADFALSKL   86 (255)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            46999999999999999999999887  889998875  222233343321  1222111 11222   12       23


Q ss_pred             CCCcEEEEcCCCCCC--CCCCHHH---HHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 017551           87 TGMDLVIIPAGVPRK--PGMTRDD---LFNINAGIVRTLCEGIAKC---CPNATVNLISN  138 (369)
Q Consensus        87 ~~ADiVii~ag~p~k--~g~~r~~---~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN  138 (369)
                      ...|++|..+|....  ...+..+   .+..|+.-...+.+.+..+   ...+.++++|.
T Consensus        87 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS  146 (255)
T PRK06113         87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITS  146 (255)
T ss_pred             CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEec
Confidence            457999999885321  1233322   3566766555555554422   23344555543

>PRK08589 short chain dehydrogenase; Validated

Probab=96.04  E-value=0.08  Score=49.95  Aligned_cols=113  Identities=16%  Similarity=0.249  Sum_probs=65.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------cC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT   87 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l~   87 (369)
                      .+++.|+||+|++|..++..|+..+.  +|+++|.++ ......++.+..  .++..+. .-++   ..++       +.
T Consensus         6 ~k~vlItGas~gIG~aia~~l~~~G~--~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (272)
T PRK08589          6 NKVAVITGASTGIGQASAIALAQEGA--YVLAVDIAEAVSETVDKIKSNG--GKAKAYHVDISDEQQVKDFASEIKEQFG   81 (272)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCcHHHHHHHHHHHhcC--CeEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            45899999999999999999999987  999999874 222333443321  1222211 1112   2222       23


Q ss_pred             CCcEEEEcCCCCCCCC----CCH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 017551           88 GMDLVIIPAGVPRKPG----MTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        88 ~ADiVii~ag~p~k~g----~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      ..|++|..+|.....+    .+.   ...+..|+.    +.+.+.+.+.+.  .+.|++++.
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~g~iv~isS  141 (272)
T PRK08589         82 RVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQ--GGSIINTSS  141 (272)
T ss_pred             CcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEeCc
Confidence            5799999998753221    122   223344544    344445544433  366777664

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.03  E-value=0.059  Score=46.05  Aligned_cols=33  Identities=24%  Similarity=0.508  Sum_probs=29.8

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ||.|+|+ |.+|+.++..|+..|. .++.++|.+.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv-~~i~ivD~d~   33 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGV-GKITLIDFDT   33 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCC-CEEEEEcCCC
Confidence            6899999 9999999999999886 5899999874

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=96.03  E-value=0.13  Score=46.92  Aligned_cols=116  Identities=22%  Similarity=0.316  Sum_probs=65.6

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc---hhHHHHhhcccCCCeEEEEe-CCCC---hhhh------
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL-GQPQ---LENA------   85 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~---~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a------   85 (369)
                      +.++|.|+||+|++|+.++..|...+.  ++++...+..   .....++...  ..++..+. .-++   +.++      
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGA--NVVINYASSEAGAEALVAEIGAL--GGKALAVQGDVSDAESVERAVDEAKA   79 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCchhHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            346999999999999999999998887  7766665542   1222223221  12222211 1112   2222      


Q ss_pred             -cCCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhhC---CCeEEEEecC
Q 017551           86 -LTGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKCC---PNATVNLISN  138 (369)
Q Consensus        86 -l~~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tN  138 (369)
                       +.+.|+||..+|.....   ..+.   ...+..|+.....+.+.+..+.   ....++++|.
T Consensus        80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss  142 (248)
T PRK05557         80 EFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISS  142 (248)
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcc
Confidence             23689999998864321   1122   2234567666666666666543   2345555553

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=96.03  E-value=0.044  Score=51.42  Aligned_cols=114  Identities=14%  Similarity=0.124  Sum_probs=75.0

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCC-eEEEEeCC-------CChhhhcCCCc
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGA-VVRGFLGQ-------PQLENALTGMD   90 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~-~v~~~~~t-------~dl~~al~~AD   90 (369)
                      +-+.|+|||+++|...+..|...|.  .|+|...+.  +...+.++.+....+ .+.. +..       ..+.+.+...|
T Consensus         7 kv~lITGASSGiG~A~A~~l~~~G~--~vvl~aRR~drL~~la~~~~~~~~~~~~~DV-tD~~~~~~~i~~~~~~~g~iD   83 (246)
T COG4221           7 KVALITGASSGIGEATARALAEAGA--KVVLAARREERLEALADEIGAGAALALALDV-TDRAAVEAAIEALPEEFGRID   83 (246)
T ss_pred             cEEEEecCcchHHHHHHHHHHHCCC--eEEEEeccHHHHHHHHHhhccCceEEEeecc-CCHHHHHHHHHHHHHhhCccc
Confidence            4578999999999999999999999  999999987  455666666311101 1111 111       12445678899


Q ss_pred             EEEEcCCCCCCCC------CCHHHHHHHHHHHHHHHHHH----HhhhCCCeEEEEecC
Q 017551           91 LVIIPAGVPRKPG------MTRDDLFNINAGIVRTLCEG----IAKCCPNATVNLISN  138 (369)
Q Consensus        91 iVii~ag~p~k~g------~~r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tN  138 (369)
                      ++|..||..+...      .+...++..|+.-+......    +.+. ..+.||+++-
T Consensus        84 iLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r-~~G~IiN~~S  140 (246)
T COG4221          84 ILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVER-KSGHIINLGS  140 (246)
T ss_pred             EEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhc-CCceEEEecc
Confidence            9999999765311      12456788887665555444    4433 3557888764

>PRK05855 short chain dehydrogenase; Validated

Probab=96.03  E-value=0.064  Score=55.67  Aligned_cols=117  Identities=17%  Similarity=0.184  Sum_probs=69.4

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCCh---hhh------
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQL---ENA------   85 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~dl---~~a------   85 (369)
                      .+.+++.|+||+|++|..++..|+..|.  +|++.|.+..  ...+.++....  ..+..+. .-+|.   .+.      
T Consensus       313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~  388 (582)
T PRK05855        313 FSGKLVVVTGAGSGIGRETALAFAREGA--EVVASDIDEAAAERTAELIRAAG--AVAHAYRVDVSDADAMEAFAEWVRA  388 (582)
T ss_pred             CCCCEEEEECCcCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            3457899999999999999999999988  8999998762  22333333211  2222221 11222   122      


Q ss_pred             -cCCCcEEEEcCCCCCCC---CCCH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 017551           86 -LTGMDLVIIPAGVPRKP---GMTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        86 -l~~ADiVii~ag~p~k~---g~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                       +...|++|..||.....   ..+.   ...+..|..    ..+.+.+.+.+....+.|+++|-
T Consensus       389 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS  452 (582)
T PRK05855        389 EHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVAS  452 (582)
T ss_pred             hcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECC
Confidence             23579999999975421   1222   233456643    44445555555555566776654

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.03  E-value=0.014  Score=52.10  Aligned_cols=95  Identities=25%  Similarity=0.305  Sum_probs=60.0

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      -..++|.|+|. |.||+.++..+..-+.  +|+.||.......  ...+    ..+.    ..++++.++.||+|++...
T Consensus        34 l~g~tvgIiG~-G~IG~~vA~~l~~fG~--~V~~~d~~~~~~~--~~~~----~~~~----~~~l~ell~~aDiv~~~~p  100 (178)
T PF02826_consen   34 LRGKTVGIIGY-GRIGRAVARRLKAFGM--RVIGYDRSPKPEE--GADE----FGVE----YVSLDELLAQADIVSLHLP  100 (178)
T ss_dssp             STTSEEEEEST-SHHHHHHHHHHHHTT---EEEEEESSCHHHH--HHHH----TTEE----ESSHHHHHHH-SEEEE-SS
T ss_pred             cCCCEEEEEEE-cCCcCeEeeeeecCCc--eeEEecccCChhh--hccc----ccce----eeehhhhcchhhhhhhhhc
Confidence            34579999999 9999999999997777  9999999863222  1111    1112    2367899999999999842


Q ss_pred             -CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC
Q 017551           98 -VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP  139 (369)
Q Consensus        98 -~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP  139 (369)
                       .|...++-..              +.++..-|++++||++--
T Consensus       101 lt~~T~~li~~--------------~~l~~mk~ga~lvN~aRG  129 (178)
T PF02826_consen  101 LTPETRGLINA--------------EFLAKMKPGAVLVNVARG  129 (178)
T ss_dssp             SSTTTTTSBSH--------------HHHHTSTTTEEEEESSSG
T ss_pred             cccccceeeee--------------eeeeccccceEEEeccch
Confidence             2222232111              223334478889988743

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.01  E-value=0.048  Score=50.80  Aligned_cols=99  Identities=22%  Similarity=0.309  Sum_probs=63.0

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCC-CcEEEEEeCCC----chh-----HHHHhhcccCCCeEEEEeCCCChhhhcCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVN----TPG-----VTADISHMDTGAVVRGFLGQPQLENALTG   88 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~-~~el~L~D~~~----~~g-----~~~dL~~~~~~~~v~~~~~t~dl~~al~~   88 (369)
                      +..||.|+|| |.+|..++..|...+. -++|.++|.+.    ...     ....+.+......   .  ..++.+++++
T Consensus        24 ~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~---~--~~~l~~~l~~   97 (226)
T cd05311          24 EEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK---T--GGTLKEALKG   97 (226)
T ss_pred             cCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc---c--cCCHHHHHhc
Confidence            4569999999 9999999999988764 23899999984    111     1122222110011   1  1357788999


Q ss_pred             CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC
Q 017551           89 MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN  141 (369)
Q Consensus        89 ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~  141 (369)
                      +|+||-+.+    +|+-.           .+..+.+   +++.+++..+||..
T Consensus        98 ~dvlIgaT~----~G~~~-----------~~~l~~m---~~~~ivf~lsnP~~  132 (226)
T cd05311          98 ADVFIGVSR----PGVVK-----------KEMIKKM---AKDPIVFALANPVP  132 (226)
T ss_pred             CCEEEeCCC----CCCCC-----------HHHHHhh---CCCCEEEEeCCCCC
Confidence            999999754    35411           1233333   46777778889985

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>TIGR02415 23BDH acetoin reductases

Probab=95.98  E-value=0.086  Score=48.68  Aligned_cols=112  Identities=18%  Similarity=0.317  Sum_probs=64.4

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------cCC
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LTG   88 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l~~   88 (369)
                      ++.|+||+|++|..++..|.+.+.  +|++++.+..  .....++.+.  ...+..+. .-+|   +.++       +..
T Consensus         2 ~~lItG~sg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~   77 (254)
T TIGR02415         2 VALVTGGAQGIGKGIAERLAKDGF--AVAVADLNEETAKETAKEINQA--GGKAVAYKLDVSDKDQVFSAIDQAAEKFGG   77 (254)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999887  8999998752  2222333322  12233221 1122   2122       235


Q ss_pred             CcEEEEcCCCCC-CC--CCCHH---HHHHHHHH----HHHHHHHHHhhhCCCeEEEEec
Q 017551           89 MDLVIIPAGVPR-KP--GMTRD---DLFNINAG----IVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        89 ADiVii~ag~p~-k~--g~~r~---~~~~~N~~----i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      .|+||..+|... .+  +.+..   ..+..|..    +++.+.+.+.+....+.++++|
T Consensus        78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~s  136 (254)
T TIGR02415        78 FDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAA  136 (254)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEec
Confidence            799999988632 11  22332   23455543    3344555555544446666554

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK09134 short chain dehydrogenase; Provisional

Probab=95.98  E-value=0.089  Score=48.97  Aligned_cols=114  Identities=16%  Similarity=0.163  Sum_probs=64.7

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-----
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-----   86 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~---~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-----   86 (369)
                      ..+++.|+||+|++|..++..|...+.  .+++.+...   .......+.+.  ..++..+. .-+|   +.+++     
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~   83 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGF--DVAVHYNRSRDEAEALAAEIRAL--GRRAVALQADLADEAEVRALVARASA   83 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            356899999999999999999998886  787776643   11222223221  12333221 1122   22233     


Q ss_pred             --CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhC---CCeEEEEe
Q 017551           87 --TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCC---PNATVNLI  136 (369)
Q Consensus        87 --~~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~  136 (369)
                        ...|+||..+|.....   ..+   ....+..|+.-...+.+.+..+.   ..+.++++
T Consensus        84 ~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~  144 (258)
T PRK09134         84 ALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNM  144 (258)
T ss_pred             HcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEE
Confidence              3469999999863321   122   23456677665555555555443   23455544

>PRK08291 ectoine utilization protein EutC; Validated

Probab=95.97  E-value=0.031  Score=54.92  Aligned_cols=72  Identities=15%  Similarity=0.251  Sum_probs=50.3

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      .++|+|+|+ |..|...+..+.....+.+|.++|.+.  ....+.++.+.. ...+..   .+|+++++.+||+||.+.
T Consensus       132 ~~~v~IiGa-G~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~-g~~v~~---~~d~~~al~~aDiVi~aT  205 (330)
T PRK08291        132 ASRAAVIGA-GEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAEL-GIPVTV---ARDVHEAVAGADIIVTTT  205 (330)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhcc-CceEEE---eCCHHHHHccCCEEEEee
Confidence            469999999 989988777776544467999999986  333444444321 223332   357889999999998874

>PRK07454 short chain dehydrogenase; Provisional

Probab=95.97  E-value=0.078  Score=48.71  Aligned_cols=115  Identities=17%  Similarity=0.204  Sum_probs=64.7

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCCh---hhhc------
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQL---ENAL------   86 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~dl---~~al------   86 (369)
                      ..+++.|+||+|++|+.++..|+.++.  +|+++|.+..  .....++...  ..++..+. .-+|.   ..++      
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGW--DLALVARSQDALEALAAELRST--GVKAAAYSIDLSNPEAIAPGIAELLEQ   80 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            345899999999999999999999887  8999998752  2222222221  12222221 11222   2222      


Q ss_pred             -CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHH----HHHHHHHhhhCCCeEEEEecC
Q 017551           87 -TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIV----RTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        87 -~~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tN  138 (369)
                       .+.|+||..+|.....   ..+   -...+..|+...    +.+.+.+.+. ..+.++++|.
T Consensus        81 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS  142 (241)
T PRK07454         81 FGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRAR-GGGLIINVSS  142 (241)
T ss_pred             cCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-CCcEEEEEcc
Confidence             3589999999864321   122   223345555543    3344444433 2345666653

>PRK08628 short chain dehydrogenase; Provisional

Probab=95.97  E-value=0.12  Score=47.87  Aligned_cols=114  Identities=13%  Similarity=0.115  Sum_probs=65.6

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------C
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------T   87 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-------~   87 (369)
                      .++|.|+||+|++|..++..|++.+.  ++++.+.+.. .....++....  .++..+. .-++   +..++       .
T Consensus         7 ~~~ilItGasggiG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (258)
T PRK08628          7 DKVVIVTGGASGIGAAISLRLAEEGA--IPVIFGRSAPDDEFAEELRALQ--PRAEFVQVDLTDDAQCRDAVEQTVAKFG   82 (258)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCC--cEEEEcCChhhHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            45899999999999999999999887  7888888762 22233343221  2222221 1122   22333       2


Q ss_pred             CCcEEEEcCCCCCCCC--C---CHHHHHHHHHHHHHHHHHHHhhhC--CCeEEEEec
Q 017551           88 GMDLVIIPAGVPRKPG--M---TRDDLFNINAGIVRTLCEGIAKCC--PNATVNLIS  137 (369)
Q Consensus        88 ~ADiVii~ag~p~k~g--~---~r~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~t  137 (369)
                      ..|+||..+|.....+  .   +-...+..|+.....+.+.+..+.  ..+.++++|
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~s  139 (258)
T PRK08628         83 RIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNIS  139 (258)
T ss_pred             CCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEEC
Confidence            5799999998643222  1   123345667665555555544322  234455444

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=95.97  E-value=0.041  Score=53.34  Aligned_cols=67  Identities=18%  Similarity=0.203  Sum_probs=48.5

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      ...||.|+|+ |.+|..++..|+..+.  +|..+|.+.. ...+.++     .....   ...++.+.++++|+||.+.
T Consensus       151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga--~V~v~~r~~~~~~~~~~~-----G~~~~---~~~~l~~~l~~aDiVI~t~  218 (296)
T PRK08306        151 HGSNVLVLGF-GRTGMTLARTLKALGA--NVTVGARKSAHLARITEM-----GLSPF---HLSELAEEVGKIDIIFNTI  218 (296)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHc-----CCeee---cHHHHHHHhCCCCEEEECC
Confidence            4679999999 9999999999998886  9999999852 2222211     11111   1235678889999999985

>PRK06949 short chain dehydrogenase; Provisional

Probab=95.97  E-value=0.079  Score=49.07  Aligned_cols=36  Identities=19%  Similarity=0.229  Sum_probs=32.2

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ..++|.|+||+|++|+.++..|+..+.  +|++.+.+.
T Consensus         8 ~~k~ilItGasg~IG~~~a~~l~~~G~--~Vi~~~r~~   43 (258)
T PRK06949          8 EGKVALVTGASSGLGARFAQVLAQAGA--KVVLASRRV   43 (258)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCH
Confidence            357999999999999999999998887  899999876

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.96  E-value=0.079  Score=48.49  Aligned_cols=102  Identities=23%  Similarity=0.311  Sum_probs=58.4

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEE-eCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC-----
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLY-DVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT-----   87 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~-D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~-----   87 (369)
                      .++|.|+||+|++|+.++..|++.+.  ++++. +.+..  ......+...  ...+.... .-+|   +.+.++     
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~--~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGA--KVVIAYDINEEAAQELLEEIKEE--GGDAIAVKADVSSEEDVENLVEQIVEK   80 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            35899999999999999999998887  77777 88652  1122222221  12333321 1122   222232     


Q ss_pred             --CCcEEEEcCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHHh
Q 017551           88 --GMDLVIIPAGVPRK-P--GMTR---DDLFNINAGIVRTLCEGIA  125 (369)
Q Consensus        88 --~ADiVii~ag~p~k-~--g~~r---~~~~~~N~~i~~~i~~~i~  125 (369)
                        +.|+||..+|.... +  ..+.   ...+..|..-...+.+.+.
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  126 (247)
T PRK05565         81 FGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYAL  126 (247)
T ss_pred             hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence              78999999886421 1  1222   2345566665444444443

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=95.95  E-value=0.069  Score=51.04  Aligned_cols=95  Identities=24%  Similarity=0.273  Sum_probs=61.1

Q ss_pred             EEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcC-CCcEEEEcCCCCCC
Q 017551           23 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT-GMDLVIIPAGVPRK  101 (369)
Q Consensus        23 I~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~-~ADiVii~ag~p~k  101 (369)
                      |+|.||+|+||+++...|...++  +|..+-.+..+.. . ..|    ..+...   +.+.+... ++|+||..||.|--
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh--~v~iltR~~~~~~-~-~~~----~~v~~~---~~~~~~~~~~~DavINLAG~~I~   69 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGH--QVTILTRRPPKAS-Q-NLH----PNVTLW---EGLADALTLGIDAVINLAGEPIA   69 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCC--eEEEEEcCCcchh-h-hcC----cccccc---chhhhcccCCCCEEEECCCCccc
Confidence            67999999999999999999998  8888887752211 1 111    122211   11223333 79999999998753


Q ss_pred             CC----CCHHHHHHHHHHHHHHHHHHHhhhC
Q 017551          102 PG----MTRDDLFNINAGIVRTLCEGIAKCC  128 (369)
Q Consensus       102 ~g----~~r~~~~~~N~~i~~~i~~~i~~~~  128 (369)
                      ..    +.-..+..--+...+.+.+.|.+..
T Consensus        70 ~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~  100 (297)
T COG1090          70 ERRWTEKQKEEIRQSRINTTEKLVELIAASE  100 (297)
T ss_pred             cccCCHHHHHHHHHHHhHHHHHHHHHHHhcc
Confidence            22    1122334444667778888888665

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=95.95  E-value=0.36  Score=45.74  Aligned_cols=68  Identities=25%  Similarity=0.263  Sum_probs=45.3

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      ++||+|+|++|.||+.++..+...+-+.-+.++|.+.......     . ...+..   ++|+++.++++|+||...
T Consensus         1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~-----~-~~~i~~---~~dl~~ll~~~DvVid~t   68 (257)
T PRK00048          1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ-----G-ALGVAI---TDDLEAVLADADVLIDFT   68 (257)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc-----C-CCCccc---cCCHHHhccCCCEEEECC
Confidence            4799999988999999998887665444455688775211111     1 112222   467888888999999764

>PRK09072 short chain dehydrogenase; Provisional

Probab=95.94  E-value=0.14  Score=47.82  Aligned_cols=114  Identities=22%  Similarity=0.235  Sum_probs=66.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCChh---h------hcC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQLE---N------ALT   87 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~dl~---~------al~   87 (369)
                      .++|.|+||+|++|..++..|+.+|.  +|+++|.+..  .....++.+   ..++..+. .-+|.+   +      ++.
T Consensus         5 ~~~vlItG~s~~iG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~d~~~~~~~~~~~~~~~   79 (263)
T PRK09072          5 DKRVLLTGASGGIGQALAEALAAAGA--RLLLVGRNAEKLEALAARLPY---PGRHRWVVADLTSEAGREAVLARAREMG   79 (263)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHhc---CCceEEEEccCCCHHHHHHHHHHHHhcC
Confidence            45899999999999999999999887  8999998762  222222311   12333221 112221   1      135


Q ss_pred             CCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 017551           88 GMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  138 (369)
Q Consensus        88 ~ADiVii~ag~p~k~g---~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN  138 (369)
                      ..|+||..+|......   .+   -...+..|+.....+.+.+..+   .+.+.+++++.
T Consensus        80 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS  139 (263)
T PRK09072         80 GINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGS  139 (263)
T ss_pred             CCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecC
Confidence            6799999998753211   12   1334556766555555555432   22355666654

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=95.94  E-value=0.022  Score=51.74  Aligned_cols=77  Identities=21%  Similarity=0.257  Sum_probs=52.0

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP   95 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~   95 (369)
                      -..++|+|||.|.-+|.+++.+|++.+.  .+.++|++.-.  .....+.|..+  ..+.  -+.++.+.++.||+||.+
T Consensus        60 l~GK~vvVIGrS~iVGkPla~lL~~~~A--tVti~~~~~~~~~~~~~~~~hs~t--~~~~--~~~~l~~~~~~ADIVIsA  133 (197)
T cd01079          60 LYGKTITIINRSEVVGRPLAALLANDGA--RVYSVDINGIQVFTRGESIRHEKH--HVTD--EEAMTLDCLSQSDVVITG  133 (197)
T ss_pred             CCCCEEEEECCCccchHHHHHHHHHCCC--EEEEEecCcccccccccccccccc--cccc--hhhHHHHHhhhCCEEEEc
Confidence            4457999999988999999999998886  89999987611  10011122111  0000  011267889999999999


Q ss_pred             CCCCC
Q 017551           96 AGVPR  100 (369)
Q Consensus        96 ag~p~  100 (369)
                      .|.|.
T Consensus       134 vG~~~  138 (197)
T cd01079         134 VPSPN  138 (197)
T ss_pred             cCCCC
Confidence            88773

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>PRK06398 aldose dehydrogenase; Validated

Probab=95.94  E-value=0.026  Score=52.92  Aligned_cols=107  Identities=14%  Similarity=0.180  Sum_probs=61.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEE-eCCCChhhh-------cCCCcE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQLENA-------LTGMDL   91 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~-~~t~dl~~a-------l~~ADi   91 (369)
                      .+++.|+||+|++|..++..|+..|.  +|+++|.+.....     ..   ..+... +...+.+++       +...|+
T Consensus         6 gk~vlItGas~gIG~~ia~~l~~~G~--~Vi~~~r~~~~~~-----~~---~~~~~D~~~~~~i~~~~~~~~~~~~~id~   75 (258)
T PRK06398          6 DKVAIVTGGSQGIGKAVVNRLKEEGS--NVINFDIKEPSYN-----DV---DYFKVDVSNKEQVIKGIDYVISKYGRIDI   75 (258)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--eEEEEeCCccccC-----ce---EEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            35899999999999999999999987  8999998752110     00   001100 001122222       346899


Q ss_pred             EEEcCCCCCC-C--CCCH---HHHHHHHHHHH----HHHHHHHhhhCCCeEEEEec
Q 017551           92 VIIPAGVPRK-P--GMTR---DDLFNINAGIV----RTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        92 Vii~ag~p~k-~--g~~r---~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~t  137 (369)
                      +|..+|.+.. +  ..+.   ...+..|+.-.    +.+.+.+.+ ...+.++++|
T Consensus        76 li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~g~iv~is  130 (258)
T PRK06398         76 LVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLK-QDKGVIINIA  130 (258)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH-cCCeEEEEeC
Confidence            9999987432 1  1222   23355665544    444444433 2345666665

>COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]

Probab=95.94  E-value=0.056  Score=51.60  Aligned_cols=96  Identities=16%  Similarity=0.211  Sum_probs=63.5

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCC--CCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINP--LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~--~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      ++||++||+ |+||+.++..|...+  ...+|...|.++.+..  ++.... +.. .    +++..++...+|+||++. 
T Consensus         1 ~~~IgfIG~-G~Mg~Ai~~gl~~~g~~~~~~I~v~~~~~e~~~--~l~~~~-g~~-~----~~~~~~~~~~advv~Lav-   70 (266)
T COG0345           1 MMKIGFIGA-GNMGEAILSGLLKSGALPPEEIIVTNRSEEKRA--ALAAEY-GVV-T----TTDNQEAVEEADVVFLAV-   70 (266)
T ss_pred             CceEEEEcc-CHHHHHHHHHHHhcCCCCcceEEEeCCCHHHHH--HHHHHc-CCc-c----cCcHHHHHhhCCEEEEEe-
Confidence            369999999 999999999998887  2468888888763222  233221 111 1    345568899999999985 


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 017551           98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  140 (369)
Q Consensus        98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv  140 (369)
                         ||            ..+.++...++...++-++|-+.-.+
T Consensus        71 ---KP------------q~~~~vl~~l~~~~~~~lvISiaAGv   98 (266)
T COG0345          71 ---KP------------QDLEEVLSKLKPLTKDKLVISIAAGV   98 (266)
T ss_pred             ---Ch------------HhHHHHHHHhhcccCCCEEEEEeCCC
Confidence               33            23556777776644555555544333

>PRK08226 short chain dehydrogenase; Provisional

Probab=95.94  E-value=0.089  Score=49.01  Aligned_cols=114  Identities=22%  Similarity=0.283  Sum_probs=64.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------cC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT   87 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l~   87 (369)
                      .+++.|+||+|++|+.++..|...+.  +|++++.+.. ......+...  ..++..+. .-++   +.+.       +.
T Consensus         6 ~~~~lItG~s~giG~~la~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   81 (263)
T PRK08226          6 GKTALITGALQGIGEGIARVFARHGA--NLILLDISPEIEKLADELCGR--GHRCTAVVADVRDPASVAAAIKRAKEKEG   81 (263)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999887  8999998752 2222222211  12222221 1122   2222       23


Q ss_pred             CCcEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEec
Q 017551           88 GMDLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLIS  137 (369)
Q Consensus        88 ~ADiVii~ag~p~k-~--g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~t  137 (369)
                      ..|+||..+|.... +  ..+   ....+..|+.....+.+.+..+   ...+.++++|
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~is  140 (263)
T PRK08226         82 RIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMS  140 (263)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEC
Confidence            57999999986321 1  111   2234566666555555554432   1234555554

>PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional

Probab=95.93  E-value=0.052  Score=59.01  Aligned_cols=67  Identities=21%  Similarity=0.398  Sum_probs=47.8

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch-hHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~-g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      .||+|||+ |.+|..++..++..++..+|..+|.+... ..+.++.     ....   ..+++.++++++|+||++.
T Consensus         4 ~~I~IIG~-G~mG~ala~~l~~~G~~~~V~~~d~~~~~~~~a~~~g-----~~~~---~~~~~~~~~~~aDvVilav   71 (735)
T PRK14806          4 GRVVVIGL-GLIGGSFAKALRERGLAREVVAVDRRAKSLELAVSLG-----VIDR---GEEDLAEAVSGADVIVLAV   71 (735)
T ss_pred             cEEEEEee-CHHHHHHHHHHHhcCCCCEEEEEECChhHHHHHHHCC-----CCCc---ccCCHHHHhcCCCEEEECC
Confidence            58999999 99999999999988754479999998622 1222111     1101   1346678899999999985

>PRK06523 short chain dehydrogenase; Provisional

Probab=95.91  E-value=0.015  Score=54.09  Aligned_cols=108  Identities=19%  Similarity=0.235  Sum_probs=63.3

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCC----------hhhhcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ----------LENALT   87 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~d----------l~~al~   87 (369)
                      +.++|.|+||+|++|+.++..|+..+.  +|++.+.+....    +..     .+.... .-+|          ..+.+.
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~--~v~~~~r~~~~~----~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGA--RVVTTARSRPDD----LPE-----GVEFVAADLTTAEGCAAVARAVLERLG   76 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCC--EEEEEeCChhhh----cCC-----ceeEEecCCCCHHHHHHHHHHHHHHcC
Confidence            346899999999999999999999887  899999875211    110     111110 0111          123345


Q ss_pred             CCcEEEEcCCCCCCC-C----CC---HHHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 017551           88 GMDLVIIPAGVPRKP-G----MT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        88 ~ADiVii~ag~p~k~-g----~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      ..|+||..+|....+ +    .+   ....+..|+.    +.+.+.+.+.+.. .+.++++|.
T Consensus        77 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS  138 (260)
T PRK06523         77 GVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG-SGVIIHVTS  138 (260)
T ss_pred             CCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEec
Confidence            789999999864211 1    12   2233445544    3445555555443 345666654

>PLN03139 formate dehydrogenase; Provisional

Probab=95.90  E-value=0.054  Score=54.53  Aligned_cols=94  Identities=23%  Similarity=0.222  Sum_probs=60.3

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      ..++|+|||. |.||+.++..+..-+.  +|+.||.........  .+    ..+..   ..++++.+++||+|++..  
T Consensus       198 ~gktVGIVG~-G~IG~~vA~~L~afG~--~V~~~d~~~~~~~~~--~~----~g~~~---~~~l~ell~~sDvV~l~l--  263 (386)
T PLN03139        198 EGKTVGTVGA-GRIGRLLLQRLKPFNC--NLLYHDRLKMDPELE--KE----TGAKF---EEDLDAMLPKCDVVVINT--  263 (386)
T ss_pred             CCCEEEEEee-cHHHHHHHHHHHHCCC--EEEEECCCCcchhhH--hh----cCcee---cCCHHHHHhhCCEEEEeC--
Confidence            4579999999 9999999999987666  899999864211111  11    11121   246889999999999984  


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      |..+         .+-.++.  .+.+....|.+++|+.+
T Consensus       264 Plt~---------~T~~li~--~~~l~~mk~ga~lIN~a  291 (386)
T PLN03139        264 PLTE---------KTRGMFN--KERIAKMKKGVLIVNNA  291 (386)
T ss_pred             CCCH---------HHHHHhC--HHHHhhCCCCeEEEECC
Confidence            3211         1112221  13444445889888886

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=95.90  E-value=0.025  Score=52.03  Aligned_cols=92  Identities=14%  Similarity=0.146  Sum_probs=57.6

Q ss_pred             EEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEE-EEe-CCCChhhhcCCCcEEEEcCCCCC
Q 017551           23 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVR-GFL-GQPQLENALTGMDLVIIPAGVPR  100 (369)
Q Consensus        23 I~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~-~~~-~t~dl~~al~~ADiVii~ag~p~  100 (369)
                      |+|+||+|.+|+.++..|...+.  +|..+=.+........|.+..  ..+. ... ...++.++|+|+|.|++..+...
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~--~V~~l~R~~~~~~~~~l~~~g--~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~   76 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGF--SVRALVRDPSSDRAQQLQALG--AEVVEADYDDPESLVAALKGVDAVFSVTPPSH   76 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTG--CEEEEESSSHHHHHHHHHHTT--TEEEES-TT-HHHHHHHHTTCSEEEEESSCSC
T ss_pred             CEEECCccHHHHHHHHHHHhCCC--CcEEEEeccchhhhhhhhccc--ceEeecccCCHHHHHHHHcCCceEEeecCcch
Confidence            78999999999999999998766  777776665333333344432  2222 111 12456789999999999865332


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhhhC
Q 017551          101 KPGMTRDDLFNINAGIVRTLCEGIAKCC  128 (369)
Q Consensus       101 k~g~~r~~~~~~N~~i~~~i~~~i~~~~  128 (369)
                         ..+       .+....++++..+..
T Consensus        77 ---~~~-------~~~~~~li~Aa~~ag   94 (233)
T PF05368_consen   77 ---PSE-------LEQQKNLIDAAKAAG   94 (233)
T ss_dssp             ---CCH-------HHHHHHHHHHHHHHT
T ss_pred             ---hhh-------hhhhhhHHHhhhccc
Confidence               111       333445666666655

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type

Probab=95.90  E-value=0.034  Score=54.62  Aligned_cols=70  Identities=16%  Similarity=0.154  Sum_probs=50.6

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP   95 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~   95 (369)
                      ..+++|||+ |.+|...+..+.....+.+|.+||.+.  +...+.++.+.  ...+..   ..+.++++++||+|+.+
T Consensus       128 ~~~lgiiG~-G~qA~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~--g~~v~~---~~~~~eav~~aDiVita  199 (325)
T TIGR02371       128 SSVLGIIGA-GRQAWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDY--EVPVRA---ATDPREAVEGCDILVTT  199 (325)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhh--CCcEEE---eCCHHHHhccCCEEEEe
Confidence            469999999 999998776666555678999999987  33344444431  223443   35678999999999986

This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=95.89  E-value=0.054  Score=49.31  Aligned_cols=113  Identities=17%  Similarity=0.264  Sum_probs=65.9

Q ss_pred             EEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHhhcccCCCeEEEEe-C---CCChhhhc-------CC
Q 017551           23 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-G---QPQLENAL-------TG   88 (369)
Q Consensus        23 I~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~---~~g~~~dL~~~~~~~~v~~~~-~---t~dl~~al-------~~   88 (369)
                      |.|+|++|++|+.++..|..++.  ++++.+.+.   ......++.+..  .++.... .   ..++.+++       ..
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGA--KVIITYRSSEEGAEEVVEELKAYG--VKALGVVCDVSDREDVKAVVEEIEEELGP   76 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCchhHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            46999999999999999999887  899998764   122233333221  1222211 1   12222333       34


Q ss_pred             CcEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHhhhC---CCeEEEEecCC
Q 017551           89 MDLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEGIAKCC---PNATVNLISNP  139 (369)
Q Consensus        89 ADiVii~ag~p~k-~--g~~---r~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tNP  139 (369)
                      .|+||..+|.... +  +.+   ....+..|......+.+.+..+.   ....++++|-.
T Consensus        77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~  136 (239)
T TIGR01830        77 IDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSV  136 (239)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCc
Confidence            6999999886421 1  111   23456677776666766665542   23456666543

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK06101 short chain dehydrogenase; Provisional

Probab=95.88  E-value=0.11  Score=47.90  Aligned_cols=114  Identities=22%  Similarity=0.199  Sum_probs=64.9

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCC-CeEEEE-eCCCChhhhcCC----CcEEEE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTG-AVVRGF-LGQPQLENALTG----MDLVII   94 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~-~~v~~~-~~t~dl~~al~~----ADiVii   94 (369)
                      .++.|+||+|++|..++..|+.+|.  +|++.|.+....  ..+...... ..+... +...+++++++.    .|.+|+
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~--~V~~~~r~~~~~--~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~   77 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGW--QVIACGRNQSVL--DELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIF   77 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCC--EEEEEECCHHHH--HHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEE
Confidence            4789999999999999999998887  899999875211  111111100 111111 111233333333    477888


Q ss_pred             cCCCCCC-C-C-CCH---HHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 017551           95 PAGVPRK-P-G-MTR---DDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  138 (369)
Q Consensus        95 ~ag~p~k-~-g-~~r---~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN  138 (369)
                      .+|.... + . .+.   ...+..|......+.+.+..+- ....++++|.
T Consensus        78 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS  128 (240)
T PRK06101         78 NAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGS  128 (240)
T ss_pred             cCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEec
Confidence            7774321 1 1 222   3456777777777777666542 3345555543

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=95.88  E-value=0.095  Score=48.80  Aligned_cols=116  Identities=19%  Similarity=0.227  Sum_probs=65.2

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC------
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT------   87 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~------   87 (369)
                      +.++|.|+||+|++|..++..|+..+.  .+++++.+. .......+...  ...+..+. ..++   ..+.++      
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~   89 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGA--DIIITTHGTNWDETRRLIEKE--GRKVTFVQVDLTKPESAEKVVKEALEEF   89 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCcHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            456999999999999999999999887  889998874 22222222221  12222221 1122   222232      


Q ss_pred             -CCcEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHhhhC---CCeEEEEecC
Q 017551           88 -GMDLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEGIAKCC---PNATVNLISN  138 (369)
Q Consensus        88 -~ADiVii~ag~p~k-~--g~~---r~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tN  138 (369)
                       ..|++|..+|.... +  ..+   ....+..|+.-...+.+.+..+.   ..+.++++|.
T Consensus        90 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS  150 (258)
T PRK06935         90 GKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIAS  150 (258)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECC
Confidence             67999999886431 1  122   23345556555444444433321   2355666654

>PRK12742 oxidoreductase; Provisional

Probab=95.87  E-value=0.066  Score=48.90  Aligned_cols=113  Identities=18%  Similarity=0.236  Sum_probs=60.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCCh---hhh---cCCCcEEE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQL---ENA---LTGMDLVI   93 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl---~~a---l~~ADiVi   93 (369)
                      .++|.|+||+|+||+.++..|+..+.  ++++.+..... ...++.... ...... ...+|.   .+.   +...|++|
T Consensus         6 ~k~vlItGasggIG~~~a~~l~~~G~--~v~~~~~~~~~-~~~~l~~~~-~~~~~~-~D~~~~~~~~~~~~~~~~id~li   80 (237)
T PRK12742          6 GKKVLVLGGSRGIGAAIVRRFVTDGA--NVRFTYAGSKD-AAERLAQET-GATAVQ-TDSADRDAVIDVVRKSGALDILV   80 (237)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--EEEEecCCCHH-HHHHHHHHh-CCeEEe-cCCCCHHHHHHHHHHhCCCcEEE
Confidence            45899999999999999999999887  78877654311 111121110 111110 111221   122   34579999


Q ss_pred             EcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEec
Q 017551           94 IPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC-CPNATVNLIS  137 (369)
Q Consensus        94 i~ag~p~k~---g~~---r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~t  137 (369)
                      ..+|.....   ..+   -...+..|+.-...++..+... .+.+.+++++
T Consensus        81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is  131 (237)
T PRK12742         81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIG  131 (237)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEe
Confidence            999864321   112   2334555655444444333332 2345566554

>PRK07060 short chain dehydrogenase; Provisional

Probab=95.86  E-value=0.029  Score=51.49  Aligned_cols=115  Identities=18%  Similarity=0.177  Sum_probs=65.2

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEE-eCCCChhhhc---CCCcEEEE
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQLENAL---TGMDLVII   94 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~-~~t~dl~~al---~~ADiVii   94 (369)
                      +.+++.|+||+|++|+.++..++..+.  +|++++.+....  .++.+......+... +...++.+++   ...|+||.
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~--~V~~~~r~~~~~--~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~   83 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGA--RVVAAARNAAAL--DRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVN   83 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCC--EEEEEeCCHHHH--HHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEE
Confidence            346899999999999999999999887  899999875211  112111100111111 1111222333   35799999


Q ss_pred             cCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhh----CCCeEEEEec
Q 017551           95 PAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC----CPNATVNLIS  137 (369)
Q Consensus        95 ~ag~p~k~---g~~r---~~~~~~N~~i~~~i~~~i~~~----~p~a~viv~t  137 (369)
                      .+|.....   ..+.   ...+..|+.-...+.+.+.+.    +..+.++++|
T Consensus        84 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~s  136 (245)
T PRK07060         84 CAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVS  136 (245)
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEc
Confidence            98864321   1222   233456666555555555443    2235566665

>PRK07035 short chain dehydrogenase; Provisional

Probab=95.86  E-value=0.07  Score=49.35  Aligned_cols=114  Identities=13%  Similarity=0.126  Sum_probs=64.3

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCCh---hhh-------c
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENA-------L   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl---~~a-------l   86 (369)
                      .++|.|+||+|++|..++..|...+.  .|+++|.+.  ......++.+..  ..+..+. .-++.   +++       +
T Consensus         8 ~k~vlItGas~gIG~~l~~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (252)
T PRK07035          8 GKIALVTGASRGIGEAIAKLLAQQGA--HVIVSSRKLDGCQAVADAIVAAG--GKAEALACHIGEMEQIDALFAHIRERH   83 (252)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35899999999999999999999887  899999875  223333343221  1222111 11222   122       2


Q ss_pred             CCCcEEEEcCCC-C-CCC--CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEec
Q 017551           87 TGMDLVIIPAGV-P-RKP--GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLIS  137 (369)
Q Consensus        87 ~~ADiVii~ag~-p-~k~--g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~t  137 (369)
                      ...|++|..+|. + ..+  ..+.   ...+..|......+.+.+.++   ...+.+++++
T Consensus        84 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~s  144 (252)
T PRK07035         84 GRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVA  144 (252)
T ss_pred             CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEEC
Confidence            357999998874 2 111  2222   234556655544444444332   2235566665

>PRK06114 short chain dehydrogenase; Provisional

Probab=95.84  E-value=0.1  Score=48.48  Aligned_cols=113  Identities=19%  Similarity=0.254  Sum_probs=63.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc---hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL-GQPQ---LENAL------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~---~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al------   86 (369)
                      .+.+.|+||+|++|+.++..|++.+.  ++++.|.+..   .....++.+..  .++..+. .-+|   ..+++      
T Consensus         8 ~k~~lVtG~s~gIG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~   83 (254)
T PRK06114          8 GQVAFVTGAGSGIGQRIAIGLAQAGA--DVALFDLRTDDGLAETAEHIEAAG--RRAIQIAADVTSKADLRAAVARTEAE   83 (254)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45899999999999999999999987  8999998652   22233343321  1222221 1122   22222      


Q ss_pred             -CCCcEEEEcCCCCCCCC---CCH---HHHHHHHHHHH----HHHHHHHhhhCCCeEEEEec
Q 017551           87 -TGMDLVIIPAGVPRKPG---MTR---DDLFNINAGIV----RTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        87 -~~ADiVii~ag~p~k~g---~~r---~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~t  137 (369)
                       ..-|++|..+|......   .+.   ...+..|+...    +.+.+.+.+. ..+.++++|
T Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~is  144 (254)
T PRK06114         84 LGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLEN-GGGSIVNIA  144 (254)
T ss_pred             cCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc-CCcEEEEEC
Confidence             34599999998743211   122   23345565444    3444444332 334566654

>PRK07825 short chain dehydrogenase; Provisional

Probab=95.84  E-value=0.054  Score=50.89  Aligned_cols=113  Identities=18%  Similarity=0.131  Sum_probs=64.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEE-eCCCCh-------hhhcCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF-LGQPQL-------ENALTGM   89 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~-~~t~dl-------~~al~~A   89 (369)
                      .++|.|+||+|++|..++..|+..+.  .|++.+.+..  .....++....   -+... +..+++       .+.+.+.
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~---~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGA--RVAIGDLDEALAKETAAELGLVV---GGPLDVTDPASFAAFLDAVEADLGPI   79 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhccce---EEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999887  8999998752  22222222110   01110 001111       1223578


Q ss_pred             cEEEEcCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 017551           90 DLVIIPAGVPRKP---GMT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        90 DiVii~ag~p~k~---g~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      |++|..+|.....   ..+   -...+..|+.    +.+.+.+.+.+. ..+.|+++|-
T Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~g~iv~isS  137 (273)
T PRK07825         80 DVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPR-GRGHVVNVAS  137 (273)
T ss_pred             CEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCEEEEEcC
Confidence            9999999864321   112   2334556654    344444444433 3456666653

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=95.84  E-value=0.0074  Score=60.32  Aligned_cols=71  Identities=25%  Similarity=0.349  Sum_probs=45.6

Q ss_pred             EEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHhhcccCCCeEEEEe----CCCChhhhcCCCcEEEEcC
Q 017551           23 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFL----GQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        23 I~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~~~~~~v~~~~----~t~dl~~al~~ADiVii~a   96 (369)
                      |.|+|| |.+|+.++..|++.+...+|++.|.+..+  ..+..+ .   ..++....    ...++.+.++++|+||.++
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~-~---~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~   75 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL-L---GDRVEAVQVDVNDPESLAELLRGCDVVINCA   75 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT---T---TTTEEEEE--TTTHHHHHHHHTTSSEEEE-S
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc-c---ccceeEEEEecCCHHHHHHHHhcCCEEEECC
Confidence            789999 99999999999998866699999998632  222222 1   12222211    1223667889999999997


Q ss_pred             CC
Q 017551           97 GV   98 (369)
Q Consensus        97 g~   98 (369)
                      |.
T Consensus        76 gp   77 (386)
T PF03435_consen   76 GP   77 (386)
T ss_dssp             SG
T ss_pred             cc
Confidence            54

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=95.83  E-value=0.057  Score=53.41  Aligned_cols=35  Identities=23%  Similarity=0.291  Sum_probs=31.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ..||.|+|+ |++|+.++..|+..|. .+|.|+|.+.
T Consensus        24 ~~~VlVvG~-GglGs~va~~La~aGv-g~i~lvD~D~   58 (339)
T PRK07688         24 EKHVLIIGA-GALGTANAEMLVRAGV-GKVTIVDRDY   58 (339)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCC-CeEEEEeCCc
Confidence            359999999 9999999999999885 5999999874

>PRK07062 short chain dehydrogenase; Provisional

Probab=95.83  E-value=0.27  Score=45.85  Aligned_cols=116  Identities=16%  Similarity=0.180  Sum_probs=66.0

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCChh----------hhc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQLE----------NAL   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl~----------~al   86 (369)
                      .+.+.|+||+|++|..++..|+..+.  +|++.+.+.  ......++.......++..+. .-+|.+          +.+
T Consensus         8 ~k~~lItGas~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (265)
T PRK07062          8 GRVAVVTGGSSGIGLATVELLLEAGA--SVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARF   85 (265)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            45899999999999999999999987  899999876  222233333221112332221 122321          123


Q ss_pred             CCCcEEEEcCCCCCCC---CCCH---HHHHHHH----HHHHHHHHHHHhhhCCCeEEEEecC
Q 017551           87 TGMDLVIIPAGVPRKP---GMTR---DDLFNIN----AGIVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~---g~~r---~~~~~~N----~~i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      ...|++|..+|.....   ..+.   ...+..|    ....+.+.+.+.+. ..+.|+++|-
T Consensus        86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS  146 (265)
T PRK07062         86 GGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRAS-AAASIVCVNS  146 (265)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc-CCcEEEEecc
Confidence            4679999999864321   1121   2223334    33455555555543 3455666653

>PRK07677 short chain dehydrogenase; Provisional

Probab=95.83  E-value=0.27  Score=45.50  Aligned_cols=113  Identities=12%  Similarity=0.105  Sum_probs=65.8

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------cC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT   87 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l~   87 (369)
                      +.+.|+||+|++|..++..|+..+.  .|++.|.+.  ......++....  ..+..+. .-+|   .+++       +.
T Consensus         2 k~~lItG~s~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (252)
T PRK07677          2 KVVIITGGSSGMGKAMAKRFAEEGA--NVVITGRTKEKLEEAKLEIEQFP--GQVLTVQMDVRNPEDVQKMVEQIDEKFG   77 (252)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            4789999999999999999999887  899999876  222333333211  2233221 1122   2121       24


Q ss_pred             CCcEEEEcCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHH----hhhCCCeEEEEec
Q 017551           88 GMDLVIIPAGVPRK-P--GMTR---DDLFNINAGIVRTLCEGI----AKCCPNATVNLIS  137 (369)
Q Consensus        88 ~ADiVii~ag~p~k-~--g~~r---~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~t  137 (369)
                      ..|+||..+|.... +  ..+.   ...+..|+.....+.+.+    .+....+.++++|
T Consensus        78 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~is  137 (252)
T PRK07677         78 RIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMV  137 (252)
T ss_pred             CccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEc
Confidence            67999999875321 1  2232   334556655444444444    3333456677766

>PRK08339 short chain dehydrogenase; Provisional

Probab=95.82  E-value=0.32  Score=45.70  Aligned_cols=114  Identities=13%  Similarity=0.136  Sum_probs=67.2

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-C---CCChhhhc------CC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-G---QPQLENAL------TG   88 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~---t~dl~~al------~~   88 (369)
                      +.+.|+||+|++|..++..|+..|.  +|+++|.+.  +.....++.... ..++..+. .   ..+.++.+      ..
T Consensus         9 k~~lItGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~   85 (263)
T PRK08339          9 KLAFTTASSKGIGFGVARVLARAGA--DVILLSRNEENLKKAREKIKSES-NVDVSYIVADLTKREDLERTVKELKNIGE   85 (263)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHHHHhhCC
Confidence            4789999999999999999999987  899999875  222233333211 12222221 1   11222222      35


Q ss_pred             CcEEEEcCCCCCCC---CCCH---HHHHHHH----HHHHHHHHHHHhhhCCCeEEEEecC
Q 017551           89 MDLVIIPAGVPRKP---GMTR---DDLFNIN----AGIVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        89 ADiVii~ag~p~k~---g~~r---~~~~~~N----~~i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      .|++|..+|.+...   ..+.   ...+..|    ..+.+.+.+.+.+.. .+.||++|-
T Consensus        86 iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~-~g~Ii~isS  144 (263)
T PRK08339         86 PDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG-FGRIIYSTS  144 (263)
T ss_pred             CcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcC
Confidence            79999999875421   1222   2334444    445666666665443 456666654

>PRK05872 short chain dehydrogenase; Provisional

Probab=95.81  E-value=0.29  Score=46.89  Aligned_cols=114  Identities=22%  Similarity=0.268  Sum_probs=65.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEE-eCCCCh---hh-------hc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF-LGQPQL---EN-------AL   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~-~~t~dl---~~-------al   86 (369)
                      .++|.|+||+|++|..++..|+..|.  +|++.+.+..  .....++..   ...+..+ ..-+|.   ++       .+
T Consensus         9 gk~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~l~~~~~~l~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   83 (296)
T PRK05872          9 GKVVVVTGAARGIGAELARRLHARGA--KLALVDLEEAELAALAAELGG---DDRVLTVVADVTDLAAMQAAAEEAVERF   83 (296)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhcC---CCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999987  8999998762  222333322   1122211 111222   11       23


Q ss_pred             CCCcEEEEcCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHHhhhC--CCeEEEEecC
Q 017551           87 TGMDLVIIPAGVPRK-P--GMTR---DDLFNINAGIVRTLCEGIAKCC--PNATVNLISN  138 (369)
Q Consensus        87 ~~ADiVii~ag~p~k-~--g~~r---~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tN  138 (369)
                      ...|+||..+|.... +  ..+.   ...+..|+.-...+.+.+..+.  ..+.++++|.
T Consensus        84 g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS  143 (296)
T PRK05872         84 GGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSS  143 (296)
T ss_pred             CCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence            568999999986431 1  1222   3345566555555444443321  2455666653

>PRK06139 short chain dehydrogenase; Provisional

Probab=95.78  E-value=0.1  Score=51.23  Aligned_cols=113  Identities=19%  Similarity=0.099  Sum_probs=64.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------c
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------L   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l   86 (369)
                      .+.|.|+||+|++|..++..|+..+.  +|++++.+.  +.....++...  ..++.... .-+|   .+++       +
T Consensus         7 ~k~vlITGAs~GIG~aia~~la~~G~--~Vvl~~R~~~~l~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~~~~~~~~~   82 (330)
T PRK06139          7 GAVVVITGASSGIGQATAEAFARRGA--RLVLAARDEEALQAVAEECRAL--GAEVLVVPTDVTDADQVKALATQAASFG   82 (330)
T ss_pred             CCEEEEcCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHHhc
Confidence            46899999999999999999999987  899999876  22233333322  12222111 1122   2222       2


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHH----HHHHHHHhhhCCCeEEEEec
Q 017551           87 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIV----RTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~t  137 (369)
                      ...|++|..+|.....   ..+   ....+..|.--.    +.+.+.+.+.. .+.+|+++
T Consensus        83 g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~-~g~iV~is  142 (330)
T PRK06139         83 GRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG-HGIFINMI  142 (330)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC-CCEEEEEc
Confidence            4679999999864321   112   223455554433    33444444332 45566554

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.78  E-value=0.029  Score=54.47  Aligned_cols=57  Identities=18%  Similarity=0.335  Sum_probs=47.5

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      -+.++|+|||.+|.||.+++..|...+.  .|.+++...                       .++.+..+.||+||...|
T Consensus       157 l~Gk~V~vIG~s~ivG~PmA~~L~~~ga--tVtv~~~~t-----------------------~~l~e~~~~ADIVIsavg  211 (301)
T PRK14194        157 LTGKHAVVIGRSNIVGKPMAALLLQAHC--SVTVVHSRS-----------------------TDAKALCRQADIVVAAVG  211 (301)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCCC--EEEEECCCC-----------------------CCHHHHHhcCCEEEEecC
Confidence            3467999999977999999999999887  888887541                       246788899999999987


Q ss_pred             CC
Q 017551           98 VP   99 (369)
Q Consensus        98 ~p   99 (369)
                      .|
T Consensus       212 ~~  213 (301)
T PRK14194        212 RP  213 (301)
T ss_pred             Ch
Confidence            66

>PRK05854 short chain dehydrogenase; Provisional

Probab=95.77  E-value=0.16  Score=49.22  Aligned_cols=115  Identities=22%  Similarity=0.141  Sum_probs=65.5

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCChh----------hh
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQLE----------NA   85 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~dl~----------~a   85 (369)
                      +.+++.|+||+|+||..++..|+..+.  +|++.+.+..  .....++........+..+. .-+|+.          +.
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~--~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~   90 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGA--EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAE   90 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence            356899999999999999999999887  9999998762  22233343221112233221 112221          12


Q ss_pred             cCCCcEEEEcCCCCCCC--CCC---HHHHHHHHHH----HHHHHHHHHhhhCCCeEEEEec
Q 017551           86 LTGMDLVIIPAGVPRKP--GMT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        86 l~~ADiVii~ag~p~k~--g~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ....|++|..||....+  ..+   ....+..|.-    +.+.+.+.+.+.  .+.|+++|
T Consensus        91 ~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~--~~riv~vs  149 (313)
T PRK05854         91 GRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG--RARVTSQS  149 (313)
T ss_pred             CCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC--CCCeEEEe
Confidence            24589999999864322  111   2233455543    344555555432  34555554

>KOG2666 consensus UDP-glucose/GDP-mannose dehydrogenase [Carbohydrate transport and metabolism; Signal transduction mechanisms]

Probab=95.77  E-value=0.044  Score=53.15  Aligned_cols=77  Identities=22%  Similarity=0.371  Sum_probs=50.4

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHH-----------HhhcccCCCeEEEEeCCCChhhhcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTA-----------DISHMDTGAVVRGFLGQPQLENALT   87 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~-----------dL~~~~~~~~v~~~~~t~dl~~al~   87 (369)
                      +||+-||| |+||-+....++.+=+-.++.++|++...  +.--           |......+.++ +|  ++|.+.+++
T Consensus         2 ~kicciga-gyvggptcavia~kcp~i~vtvvd~s~~ri~~wnsd~lpiyepgldevv~~crgknl-ff--stdiekai~   77 (481)
T KOG2666|consen    2 VKICCIGA-GYVGGPTCAVIALKCPDIEVTVVDISVPRINAWNSDKLPIYEPGLDEVVKQCRGKNL-FF--STDIEKAIK   77 (481)
T ss_pred             ceEEEecC-cccCCcchheeeecCCceEEEEEecCchHhhcccCCCCcccCCCHHHHHHHhcCCce-ee--ecchHHHhh
Confidence            59999999 99988776655554223399999998621  1100           11111112222 33  468899999


Q ss_pred             CCcEEEEcCCCCCC
Q 017551           88 GMDLVIIPAGVPRK  101 (369)
Q Consensus        88 ~ADiVii~ag~p~k  101 (369)
                      .||+|++....|.|
T Consensus        78 eadlvfisvntptk   91 (481)
T KOG2666|consen   78 EADLVFISVNTPTK   91 (481)
T ss_pred             hcceEEEEecCCcc
Confidence            99999998877765

>PRK08223 hypothetical protein; Validated

Probab=95.77  E-value=0.046  Score=52.74  Aligned_cols=35  Identities=23%  Similarity=0.296  Sum_probs=31.3

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ..||.|+|+ |.+|+.++..|+..|. .+|.|+|-|.
T Consensus        27 ~s~VlIvG~-GGLGs~va~~LA~aGV-G~i~lvD~D~   61 (287)
T PRK08223         27 NSRVAIAGL-GGVGGIHLLTLARLGI-GKFTIADFDV   61 (287)
T ss_pred             cCCEEEECC-CHHHHHHHHHHHHhCC-CeEEEEeCCC
Confidence            359999999 9999999999999985 5899999885

>PLN02350 phosphogluconate dehydrogenase (decarboxylating)

Probab=95.74  E-value=0.039  Score=57.24  Aligned_cols=98  Identities=16%  Similarity=0.169  Sum_probs=60.0

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcc-cC-C-CeEEEEeCCCChhhhcC---CCcEE
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM-DT-G-AVVRGFLGQPQLENALT---GMDLV   92 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~-~~-~-~~v~~~~~t~dl~~al~---~ADiV   92 (369)
                      ...+|++||- |.||++++..|+.+|.  +|+.||++..+.  .++.+. .. . ..+..   ..+++++.+   .+|+|
T Consensus         5 ~~~~IG~IGL-G~MG~~mA~nL~~~G~--~V~V~NRt~~k~--~~l~~~~~~~Ga~~~~~---a~s~~e~v~~l~~~dvI   76 (493)
T PLN02350          5 ALSRIGLAGL-AVMGQNLALNIAEKGF--PISVYNRTTSKV--DETVERAKKEGNLPLYG---FKDPEDFVLSIQKPRSV   76 (493)
T ss_pred             CCCCEEEEee-HHHHHHHHHHHHhCCC--eEEEECCCHHHH--HHHHHhhhhcCCccccc---CCCHHHHHhcCCCCCEE
Confidence            4568999999 9999999999999998  999999875322  222221 00 1 11121   234555554   49999


Q ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecCC
Q 017551           93 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNP  139 (369)
Q Consensus        93 ii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNP  139 (369)
                      |+...-               -+.+.++...+... .|..++|..||-
T Consensus        77 i~~v~~---------------~~aV~~Vi~gl~~~l~~G~iiID~sT~  109 (493)
T PLN02350         77 IILVKA---------------GAPVDQTIKALSEYMEPGDCIIDGGNE  109 (493)
T ss_pred             EEECCC---------------cHHHHHHHHHHHhhcCCCCEEEECCCC
Confidence            997311               12233333333333 467777777654

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.73  E-value=0.065  Score=50.38  Aligned_cols=35  Identities=26%  Similarity=0.411  Sum_probs=31.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ..||+|+|+ |.+|+.++..|+..|. .+|.|+|.+.
T Consensus        24 ~~~VlvvG~-GglGs~va~~La~~Gv-g~i~lvD~D~   58 (240)
T TIGR02355        24 ASRVLIVGL-GGLGCAASQYLAAAGV-GNLTLLDFDT   58 (240)
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHcCC-CEEEEEeCCc
Confidence            359999999 9999999999999884 5999999885

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PLN00016 RNA-binding protein; Provisional

Probab=95.73  E-value=0.065  Score=53.34  Aligned_cols=37  Identities=24%  Similarity=0.137  Sum_probs=32.8

Q ss_pred             CCCCEEEEE----cCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           18 AAGFKVAIL----GAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        18 ~~~~KI~Ii----GA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ..++||.|+    ||+|++|+.++..|...++  +|++++.+.
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~--~V~~l~R~~   90 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGH--EVTLFTRGK   90 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCCC--EEEEEecCC
Confidence            335799999    9999999999999999987  999999875

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=95.72  E-value=0.023  Score=56.34  Aligned_cols=74  Identities=23%  Similarity=0.447  Sum_probs=49.2

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCC--CcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEE
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPL--VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVII   94 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~--~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii   94 (369)
                      ..+.+||+|+||+|.+|+.+..+|..++.  +.+|.++......|....+..    ..+.+..  .|. ++++++|+|+.
T Consensus         2 ~~~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~~~~----~~l~v~~--~~~-~~~~~~Divf~   74 (347)
T PRK06728          2 SEKGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQFKG----REIIIQE--AKI-NSFEGVDIAFF   74 (347)
T ss_pred             CCCCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCeeeCC----cceEEEe--CCH-HHhcCCCEEEE
Confidence            34568999999999999999999986553  456888876653333332221    2333321  233 46789999999


Q ss_pred             cCC
Q 017551           95 PAG   97 (369)
Q Consensus        95 ~ag   97 (369)
                      +++
T Consensus        75 a~~   77 (347)
T PRK06728         75 SAG   77 (347)
T ss_pred             CCC
Confidence            753

>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]

Probab=95.72  E-value=0.076  Score=49.28  Aligned_cols=95  Identities=21%  Similarity=0.277  Sum_probs=65.6

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCC-CCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP   99 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~-~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p   99 (369)
                      +||.+||. |.||..+.-.+...+ .+.-+.+||.+..+...  +...-..+.      .+++.+.+.+.|+||.+|+  
T Consensus         1 l~vgiVGc-GaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~~--~~~~~~~~~------~s~ide~~~~~DlvVEaAS--   69 (255)
T COG1712           1 LKVGIVGC-GAIGKFLLELVRDGRVDFELVAVYDRDEEKAKE--LEASVGRRC------VSDIDELIAEVDLVVEAAS--   69 (255)
T ss_pred             CeEEEEec-cHHHHHHHHHHhcCCcceeEEEEecCCHHHHHH--HHhhcCCCc------cccHHHHhhccceeeeeCC--
Confidence            58999999 999999998888774 45678899987633221  222111111      2456666799999999983  


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 017551          100 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  140 (369)
Q Consensus       100 ~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv  140 (369)
                                    .+-+++++.++=+.+.|.+|+-++-=+
T Consensus        70 --------------~~Av~e~~~~~L~~g~d~iV~SVGALa   96 (255)
T COG1712          70 --------------PEAVREYVPKILKAGIDVIVMSVGALA   96 (255)
T ss_pred             --------------HHHHHHHhHHHHhcCCCEEEEechhcc
Confidence                          456788888888888788666554333

>PRK08324 short chain dehydrogenase; Validated

Probab=95.71  E-value=0.086  Score=56.90  Aligned_cols=113  Identities=20%  Similarity=0.266  Sum_probs=64.6

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-------   86 (369)
                      .++|.|+||+|++|+.++..|+..+.  +|+++|.+..  ......+...   ..+..+. .-+|   ..+++       
T Consensus       422 gk~vLVTGasggIG~~la~~L~~~Ga--~Vvl~~r~~~~~~~~~~~l~~~---~~v~~v~~Dvtd~~~v~~~~~~~~~~~  496 (681)
T PRK08324        422 GKVALVTGAAGGIGKATAKRLAAEGA--CVVLADLDEEAAEAAAAELGGP---DRALGVACDVTDEAAVQAAFEEAALAF  496 (681)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCcC--EEEEEeCCHHHHHHHHHHHhcc---CcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            36899999999999999999998887  8999999862  2222223221   1222111 1122   22223       


Q ss_pred             CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHH----HHHHhhhCCCeEEEEec
Q 017551           87 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTL----CEGIAKCCPNATVNLIS  137 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i~~~i----~~~i~~~~p~a~viv~t  137 (369)
                      .+.|+||..+|.....   ..+.   ...+..|......+    .+.+++....+.+++++
T Consensus       497 g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vs  557 (681)
T PRK08324        497 GGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIA  557 (681)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEEC
Confidence            3789999999864321   1222   22344554444444    44444433335566554

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.71  E-value=0.15  Score=47.18  Aligned_cols=34  Identities=21%  Similarity=0.232  Sum_probs=30.4

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ++|.|+||+|++|+.++..|+..+.  +++++|...
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~--~vi~~~r~~   36 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGF--DLAINDRPD   36 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCC--EEEEEecCc
Confidence            4789999999999999999999987  899999754

>PRK07577 short chain dehydrogenase; Provisional

Probab=95.70  E-value=0.051  Score=49.54  Aligned_cols=35  Identities=20%  Similarity=0.134  Sum_probs=31.4

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      .++|.|+||+|++|+.++..|+..+.  ++++++.+.
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~~G~--~v~~~~r~~   37 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLANLGH--QVIGIARSA   37 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCC--EEEEEeCCc
Confidence            35899999999999999999999887  899999875

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.69  E-value=0.16  Score=47.24  Aligned_cols=113  Identities=14%  Similarity=0.180  Sum_probs=63.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEE-eCCCChhhh-------cCCCcE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQLENA-------LTGMDL   91 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~-~~t~dl~~a-------l~~ADi   91 (369)
                      .+++.|+||+|++|..++..|...+.  ++++.+.+.. ....++.+... ..+... +...++.++       +...|+
T Consensus         7 ~k~~lItGas~gIG~~~a~~l~~~G~--~v~~~~~~~~-~~~~~l~~~~~-~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   82 (255)
T PRK06463          7 GKVALITGGTRGIGRAIAEAFLREGA--KVAVLYNSAE-NEAKELREKGV-FTIKCDVGNRDQVKKSKEVVEKEFGRVDV   82 (255)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCcH-HHHHHHHhCCC-eEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            46899999999999999999999887  7888765431 11122222110 011111 111122222       246799


Q ss_pred             EEEcCCCCCC-C--CCCH---HHHHHHHHHH----HHHHHHHHhhhCCCeEEEEec
Q 017551           92 VIIPAGVPRK-P--GMTR---DDLFNINAGI----VRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        92 Vii~ag~p~k-~--g~~r---~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ||..+|.... +  ..+.   ...+..|+.-    .+.+.+.+.+. ..+.++++|
T Consensus        83 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~g~iv~is  137 (255)
T PRK06463         83 LVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLS-KNGAIVNIA  137 (255)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CCcEEEEEc
Confidence            9999987432 1  1222   2334555544    56666666543 345566665

>PLN02928 oxidoreductase family protein

Probab=95.69  E-value=0.047  Score=54.18  Aligned_cols=103  Identities=23%  Similarity=0.177  Sum_probs=61.6

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHh--hcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADI--SHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL--~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      ..++|+|||. |.||+.++..+..-|.  +|..||..........+  ................++++.++.||+|++..
T Consensus       158 ~gktvGIiG~-G~IG~~vA~~l~afG~--~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~l  234 (347)
T PLN02928        158 FGKTVFILGY-GAIGIELAKRLRPFGV--KLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCC  234 (347)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHhhCCC--EEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEECC
Confidence            3579999999 9999999999986666  99999986311111111  00000000000001346889999999999984


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                        |..+.         +-.++.  .+.++..-|.+++|+++
T Consensus       235 --Plt~~---------T~~li~--~~~l~~Mk~ga~lINva  262 (347)
T PLN02928        235 --TLTKE---------TAGIVN--DEFLSSMKKGALLVNIA  262 (347)
T ss_pred             --CCChH---------hhcccC--HHHHhcCCCCeEEEECC
Confidence              32221         111121  24444455889999987

>PRK08618 ornithine cyclodeaminase; Validated

Probab=95.69  E-value=0.047  Score=53.55  Aligned_cols=72  Identities=10%  Similarity=0.151  Sum_probs=49.6

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      ..+|+|||+ |.+|...+..+.....+.+|.++|.+..  ...+.++.+. ....+..   .+++++++.+||+|+.+-
T Consensus       127 ~~~v~iiGa-G~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~-~~~~~~~---~~~~~~~~~~aDiVi~aT  200 (325)
T PRK08618        127 AKTLCLIGT-GGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSK-FNTEIYV---VNSADEAIEEADIIVTVT  200 (325)
T ss_pred             CcEEEEECC-cHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHh-cCCcEEE---eCCHHHHHhcCCEEEEcc
Confidence            468999999 9999877766654445689999999862  3333444322 1223333   256788999999999874

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=95.69  E-value=0.27  Score=46.21  Aligned_cols=75  Identities=24%  Similarity=0.266  Sum_probs=48.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------c
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------L   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l   86 (369)
                      .+++.|+||+|++|+.++..|+..+.  +|+++|.+.  ......++.+.  ..++..+. ..+|   ...+       +
T Consensus        10 ~k~vlVtGas~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   85 (278)
T PRK08277         10 GKVAVITGGGGVLGGAMAKELARAGA--KVAILDRNQEKAEAVVAEIKAA--GGEALAVKADVLDKESLEQARQQILEDF   85 (278)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999887  899999875  22233333321  12222221 1122   1112       2


Q ss_pred             CCCcEEEEcCCC
Q 017551           87 TGMDLVIIPAGV   98 (369)
Q Consensus        87 ~~ADiVii~ag~   98 (369)
                      ...|++|..+|.
T Consensus        86 g~id~li~~ag~   97 (278)
T PRK08277         86 GPCDILINGAGG   97 (278)
T ss_pred             CCCCEEEECCCC
Confidence            478999999885

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=95.69  E-value=0.054  Score=52.09  Aligned_cols=95  Identities=24%  Similarity=0.271  Sum_probs=66.9

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcC--CCcEEEEcCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLVIIPAGV   98 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~--~ADiVii~ag~   98 (369)
                      |||.|+|++|.+|+.|...+. .+.  +++-.|..+     +|+.+.+            .+.+.++  .-|+||.+|.+
T Consensus         1 M~iLi~G~~GqLG~~L~~~l~-~~~--~v~a~~~~~-----~Ditd~~------------~v~~~i~~~~PDvVIn~AAy   60 (281)
T COG1091           1 MKILITGANGQLGTELRRALP-GEF--EVIATDRAE-----LDITDPD------------AVLEVIRETRPDVVINAAAY   60 (281)
T ss_pred             CcEEEEcCCChHHHHHHHHhC-CCc--eEEeccCcc-----ccccChH------------HHHHHHHhhCCCEEEECccc
Confidence            679999999999999998887 434  677666643     3343322            1234444  55999999987


Q ss_pred             CCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           99 PRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        99 p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ..-.  ..++..-+..|+.....+++..+++  .+++|.+|
T Consensus        61 t~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~--ga~lVhiS   99 (281)
T COG1091          61 TAVDKAESEPELAFAVNATGAENLARAAAEV--GARLVHIS   99 (281)
T ss_pred             cccccccCCHHHHHHhHHHHHHHHHHHHHHh--CCeEEEee
Confidence            6533  2446666789999999999999887  45555554

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=95.68  E-value=0.041  Score=51.43  Aligned_cols=36  Identities=19%  Similarity=0.252  Sum_probs=32.1

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      +.+++.|+||+|++|+.++..|+..|.  +|+++|.+.
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~--~V~~~~r~~   40 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGA--RVAVLERSA   40 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence            346899999999999999999999987  899999875

>PRK06407 ornithine cyclodeaminase; Provisional

Probab=95.67  E-value=0.045  Score=53.20  Aligned_cols=72  Identities=17%  Similarity=0.070  Sum_probs=53.0

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP   95 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~   95 (369)
                      ....++|||+ |..|...+..+..-..+.+|.+||++.  +...+.++.+.. ...+...   ++.++++++||+|+.+
T Consensus       116 da~~l~iiGa-G~QA~~~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~-~~~v~~~---~~~~eav~~aDIV~ta  189 (301)
T PRK06407        116 NVENFTIIGS-GFQAETQLEGMASVYNPKRIRVYSRNFDHARAFAERFSKEF-GVDIRPV---DNAEAALRDADTITSI  189 (301)
T ss_pred             CCcEEEEECC-cHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHHhc-CCcEEEe---CCHHHHHhcCCEEEEe
Confidence            4579999999 988887777776666689999999987  344555555421 2345542   4678999999999975

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=95.67  E-value=0.071  Score=49.55  Aligned_cols=35  Identities=31%  Similarity=0.467  Sum_probs=31.0

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ..||+|+|+ |.+|+.++..|+..|. .++.|+|-+.
T Consensus        21 ~~~VlivG~-GglGs~va~~La~~Gv-g~i~lvD~D~   55 (228)
T cd00757          21 NARVLVVGA-GGLGSPAAEYLAAAGV-GKLGLVDDDV   55 (228)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCC-CEEEEEcCCE
Confidence            359999999 9999999999999884 6999999875

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=95.65  E-value=0.21  Score=45.72  Aligned_cols=114  Identities=20%  Similarity=0.169  Sum_probs=64.1

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcc--cCCCeEEEEe-CCCC---hhhhc-------C
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM--DTGAVVRGFL-GQPQ---LENAL-------T   87 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~--~~~~~v~~~~-~t~d---l~~al-------~   87 (369)
                      ++|.|+||+|++|+.++..|...+.  .+++.|.+.. ....++...  ....++.... .-+|   ..+++       .
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~--~vi~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   79 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGY--RVIATYFSGN-DCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEG   79 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCcH-HHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4889999999999999999998886  8999998742 111111110  0112333322 1122   22222       3


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHH----HHHHhhhCCCeEEEEecC
Q 017551           88 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTL----CEGIAKCCPNATVNLISN  138 (369)
Q Consensus        88 ~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~~i----~~~i~~~~p~a~viv~tN  138 (369)
                      ..|+||..+|.....   ..+   -...+..|+.....+    .+.+.+. +.+.++++|.
T Consensus        80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~iss  139 (245)
T PRK12824         80 PVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQ-GYGRIINISS  139 (245)
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-CCeEEEEECC
Confidence            589999998864311   112   223445665554444    4444433 4556777764

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=95.64  E-value=0.048  Score=51.71  Aligned_cols=69  Identities=12%  Similarity=0.218  Sum_probs=44.8

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhc------CC-CcEEEE
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL------TG-MDLVII   94 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al------~~-ADiVii   94 (369)
                      ||.|+||+|++|+.++..|...+.  +|.....+......   .... ..... +...+++.+++      ++ +|.|+.
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~--~V~~~~R~~~~~~~---~~~~-~~~~d-~~d~~~l~~a~~~~~~~~g~~d~v~~   73 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASV--PFLVASRSSSSSAG---PNEK-HVKFD-WLDEDTWDNPFSSDDGMEPEISAVYL   73 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCC--cEEEEeCCCccccC---CCCc-ccccc-CCCHHHHHHHHhcccCcCCceeEEEE
Confidence            589999999999999999998887  88888887521100   0000 00111 11233455666      67 999998


Q ss_pred             cCC
Q 017551           95 PAG   97 (369)
Q Consensus        95 ~ag   97 (369)
                      .++
T Consensus        74 ~~~   76 (285)
T TIGR03649        74 VAP   76 (285)
T ss_pred             eCC
Confidence            754

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.64  E-value=0.26  Score=45.33  Aligned_cols=114  Identities=14%  Similarity=0.178  Sum_probs=62.3

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEE-eCCCc--hhHHHHhhcccCCCeEEEEeC-CCC---hhhhc-------
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLY-DVVNT--PGVTADISHMDTGAVVRGFLG-QPQ---LENAL-------   86 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~-D~~~~--~g~~~dL~~~~~~~~v~~~~~-t~d---l~~al-------   86 (369)
                      +++.|+||+|++|+.++..|..++.  ++++. +.+..  .....++....  ..+..+.. -+|   +..++       
T Consensus         5 ~~vlItGa~g~iG~~~a~~l~~~g~--~v~~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (250)
T PRK08063          5 KVALVTGSSRGIGKAIALRLAEEGY--DIAVNYARSRKAAEETAEEIEALG--RKALAVKANVGDVEKIKEMFAQIDEEF   80 (250)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            5899999999999999999999886  76654 44432  22223332221  22332211 122   22223       


Q ss_pred             CCCcEEEEcCCCCC-CC--CCCHH---HHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 017551           87 TGMDLVIIPAGVPR-KP--GMTRD---DLFNINAGIVRTLCEGIAKC---CPNATVNLISN  138 (369)
Q Consensus        87 ~~ADiVii~ag~p~-k~--g~~r~---~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN  138 (369)
                      ...|+||..+|... .+  ..+..   ..+..|......+++.+..+   .+.+.++++|.
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS  141 (250)
T PRK08063         81 GRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSS  141 (250)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcc
Confidence            35899999987532 22  11221   23445655555555555443   23456666654

>PRK07023 short chain dehydrogenase; Provisional

Probab=95.63  E-value=0.026  Score=52.05  Aligned_cols=35  Identities=14%  Similarity=0.191  Sum_probs=31.3

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      .|+|.|+||+|++|..++..|+..+.  ++++++.+.
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G~--~v~~~~r~~   35 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPGI--AVLGVARSR   35 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCCC--EEEEEecCc
Confidence            36899999999999999999998887  899999865

>TIGR00465 ilvC ketol-acid reductoisomerase

Probab=95.58  E-value=0.079  Score=51.88  Aligned_cols=65  Identities=20%  Similarity=0.183  Sum_probs=43.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      .+||+|||+ |.+|++++..|...+.  +++.++....... ..+...    .+..   . +..+++++||+|+++.
T Consensus         3 ~kkIgiIG~-G~mG~AiA~~L~~sG~--~Viv~~~~~~~~~-~~a~~~----Gv~~---~-s~~ea~~~ADiVvLaV   67 (314)
T TIGR00465         3 GKTVAIIGY-GSQGHAQALNLRDSGL--NVIVGLRKGGASW-KKATED----GFKV---G-TVEEAIPQADLIMNLL   67 (314)
T ss_pred             cCEEEEEeE-cHHHHHHHHHHHHCCC--eEEEEECcChhhH-HHHHHC----CCEE---C-CHHHHHhcCCEEEEeC
Confidence            469999999 9999999999999886  6666554431111 111111    1121   1 3567889999999985

This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.57  E-value=0.11  Score=47.81  Aligned_cols=35  Identities=26%  Similarity=0.371  Sum_probs=31.4

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ..++.|+||+|++|+.++..++.++.  .++++|.+.
T Consensus         5 ~~~~lItG~~g~iG~~~a~~l~~~G~--~vi~~~r~~   39 (253)
T PRK08217          5 DKVIVITGGAQGLGRAMAEYLAQKGA--KLALIDLNQ   39 (253)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence            45899999999999999999998887  899999876

>PLN02712 arogenate dehydrogenase

Probab=95.57  E-value=0.08  Score=57.03  Aligned_cols=67  Identities=19%  Similarity=0.276  Sum_probs=46.9

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcC-CCcEEEEc
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT-GMDLVIIP   95 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~-~ADiVii~   95 (369)
                      ..+++||+|||. |.||..++..|...+.  +|+.+|.+.....+.++     .  +..   .+++++.+. ++|+||++
T Consensus       366 ~~~~~kIgIIGl-G~mG~slA~~L~~~G~--~V~~~dr~~~~~~a~~~-----G--v~~---~~~~~el~~~~aDvVILa  432 (667)
T PLN02712        366 DGSKLKIAIVGF-GNFGQFLAKTMVKQGH--TVLAYSRSDYSDEAQKL-----G--VSY---FSDADDLCEEHPEVILLC  432 (667)
T ss_pred             CCCCCEEEEEec-CHHHHHHHHHHHHCcC--EEEEEECChHHHHHHHc-----C--CeE---eCCHHHHHhcCCCEEEEC
Confidence            345689999998 9999999999998876  89999987521111111     1  122   235656565 59999998


Q ss_pred             C
Q 017551           96 A   96 (369)
Q Consensus        96 a   96 (369)
                      .
T Consensus       433 v  433 (667)
T PLN02712        433 T  433 (667)
T ss_pred             C
Confidence            4

>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []

Probab=95.56  E-value=0.039  Score=53.90  Aligned_cols=70  Identities=16%  Similarity=0.233  Sum_probs=46.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP   95 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~   95 (369)
                      ...++|+|+ |..+..-+..+...-.+.+|.+||++.  ....+.++.+ . ...+...   +|.++|+++||+|+.+
T Consensus       128 ~~~l~viGa-G~QA~~~~~a~~~~~~i~~v~v~~r~~~~~~~~~~~~~~-~-~~~v~~~---~~~~~av~~aDii~ta  199 (313)
T PF02423_consen  128 ARTLGVIGA-GVQARWHLRALAAVRPIKEVRVYSRSPERAEAFAARLRD-L-GVPVVAV---DSAEEAVRGADIIVTA  199 (313)
T ss_dssp             --EEEEE---SHHHHHHHHHHHHHS--SEEEEE-SSHHHHHHHHHHHHC-C-CTCEEEE---SSHHHHHTTSSEEEE-
T ss_pred             CceEEEECC-CHHHHHHHHHHHHhCCceEEEEEccChhHHHHHHHhhcc-c-cccceec---cchhhhcccCCEEEEc
Confidence            459999999 988887777665533388999999987  4556666776 2 3455542   5688999999999875

The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.

>PRK07109 short chain dehydrogenase; Provisional

Probab=95.55  E-value=0.22  Score=48.81  Aligned_cols=113  Identities=16%  Similarity=0.142  Sum_probs=65.1

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------c
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------L   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l   86 (369)
                      .++|.|+||+|++|..++..|+..+.  +|++++.+.  ......++...  ..++..+. .-+|   .+++       +
T Consensus         8 ~k~vlITGas~gIG~~la~~la~~G~--~Vvl~~R~~~~l~~~~~~l~~~--g~~~~~v~~Dv~d~~~v~~~~~~~~~~~   83 (334)
T PRK07109          8 RQVVVITGASAGVGRATARAFARRGA--KVVLLARGEEGLEALAAEIRAA--GGEALAVVADVADAEAVQAAADRAEEEL   83 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHc--CCcEEEEEecCCCHHHHHHHHHHHHHHC
Confidence            45899999999999999999999987  899999876  22233333321  12222211 1122   2222       2


Q ss_pred             CCCcEEEEcCCCCCC-C--CCCH---HHHHHHH----HHHHHHHHHHHhhhCCCeEEEEec
Q 017551           87 TGMDLVIIPAGVPRK-P--GMTR---DDLFNIN----AGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        87 ~~ADiVii~ag~p~k-~--g~~r---~~~~~~N----~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ...|++|..+|.... +  ..+.   ...+..|    +...+.+.+.+.+. ..+.+++++
T Consensus        84 g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~-~~g~iV~is  143 (334)
T PRK07109         84 GPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPR-DRGAIIQVG  143 (334)
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEeC
Confidence            368999999886421 1  1122   2223344    34455556665543 235566654

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=95.54  E-value=0.1  Score=47.61  Aligned_cols=35  Identities=26%  Similarity=0.402  Sum_probs=30.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ..||.|+|+ |.+|+.++..|+..|. .+|.++|-+.
T Consensus        19 ~s~VlviG~-gglGsevak~L~~~GV-g~i~lvD~d~   53 (198)
T cd01485          19 SAKVLIIGA-GALGAEIAKNLVLAGI-DSITIVDHRL   53 (198)
T ss_pred             hCcEEEECC-CHHHHHHHHHHHHcCC-CEEEEEECCc
Confidence            359999999 8899999999999885 5899999774

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.54  E-value=0.09  Score=48.06  Aligned_cols=35  Identities=26%  Similarity=0.358  Sum_probs=31.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ..+|.|+||+|++|+.++..++..+.  +|++.+.+.
T Consensus         5 ~~~vlItGa~g~iG~~~a~~l~~~G~--~V~~~~r~~   39 (238)
T PRK05786          5 GKKVAIIGVSEGLGYAVAYFALKEGA--QVCINSRNE   39 (238)
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence            35899999999999999999999888  999999876

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.53  E-value=0.15  Score=47.04  Aligned_cols=34  Identities=15%  Similarity=0.150  Sum_probs=29.1

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV   55 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~   55 (369)
                      .++|.|+||+|++|+.++..|+..+.  ++++.+.+
T Consensus         5 ~k~ilItGas~gIG~~la~~l~~~G~--~vv~~~~~   38 (253)
T PRK08642          5 EQTVLVTGGSRGLGAAIARAFAREGA--RVVVNYHQ   38 (253)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHCCC--eEEEEcCC
Confidence            45899999999999999999998887  77776654

>PRK08703 short chain dehydrogenase; Provisional

Probab=95.53  E-value=0.42  Score=43.77  Aligned_cols=35  Identities=17%  Similarity=0.223  Sum_probs=31.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      .++|.|+||+|++|..++..|+..+.  +|++++.+.
T Consensus         6 ~k~vlItG~sggiG~~la~~l~~~g~--~V~~~~r~~   40 (239)
T PRK08703          6 DKTILVTGASQGLGEQVAKAYAAAGA--TVILVARHQ   40 (239)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHcCC--EEEEEeCCh
Confidence            45899999999999999999999887  899999876

>PRK07831 short chain dehydrogenase; Provisional

Probab=95.53  E-value=0.42  Score=44.51  Aligned_cols=79  Identities=20%  Similarity=0.221  Sum_probs=48.9

Q ss_pred             CCCEEEEEcCCC-ccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhh------
Q 017551           19 AGFKVAILGAAG-GIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENA------   85 (369)
Q Consensus        19 ~~~KI~IiGA~G-~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a------   85 (369)
                      +.+++.|+||+| .+|..++..|+..+.  +|++.|.+.  ......++.......++..+. .-++   ..++      
T Consensus        16 ~~k~vlItG~sg~gIG~~ia~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   93 (262)
T PRK07831         16 AGKVVLVTAAAGTGIGSATARRALEEGA--RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE   93 (262)
T ss_pred             CCCEEEEECCCcccHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            357899999987 699999999999887  799999875  222223333211112333221 1112   2222      


Q ss_pred             -cCCCcEEEEcCCCC
Q 017551           86 -LTGMDLVIIPAGVP   99 (369)
Q Consensus        86 -l~~ADiVii~ag~p   99 (369)
                       +...|++|..+|..
T Consensus        94 ~~g~id~li~~ag~~  108 (262)
T PRK07831         94 RLGRLDVLVNNAGLG  108 (262)
T ss_pred             HcCCCCEEEECCCCC
Confidence             23679999999864

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=95.53  E-value=0.35  Score=45.07  Aligned_cols=116  Identities=18%  Similarity=0.221  Sum_probs=65.5

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc---hhHHHHhhcccCCCeEEEEe-CCCChh---hh------
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL-GQPQLE---NA------   85 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~---~g~~~dL~~~~~~~~v~~~~-~t~dl~---~a------   85 (369)
                      +.+++.|+||+|.+|..++..|+..+.  .+++.+.+..   .....++.+.  ..++..+. .-+|.+   +.      
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l~~~G~--~vvi~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~~   81 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRFGKEKA--KVVINYRSDEEEANDVAEEIKKA--GGEAIAVKGDVTVESDVVNLIQTAVK   81 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHHH
Confidence            346999999999999999999999886  7777766441   2222233321  12222221 112221   11      


Q ss_pred             -cCCCcEEEEcCCCCCC-C--CCCH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 017551           86 -LTGMDLVIIPAGVPRK-P--GMTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        86 -l~~ADiVii~ag~p~k-~--g~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                       +...|++|..+|.+.. +  ..+.   ...+..|+.    +.+.+.+.+.+....+.++++|.
T Consensus        82 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS  145 (261)
T PRK08936         82 EFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSS  145 (261)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Confidence             2357999999886432 1  1222   233556643    33455555555544566666653

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.53  E-value=0.096  Score=53.32  Aligned_cols=125  Identities=24%  Similarity=0.304  Sum_probs=73.7

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhH---HHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV---TADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP   95 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~---~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~   95 (369)
                      +.++|.|+|+ |.+|..++..|+..|.  +|+++|.+.....   ..+|..    ..++.+.+. ...+...++|+||.+
T Consensus         4 ~~k~v~iiG~-g~~G~~~A~~l~~~G~--~V~~~d~~~~~~~~~~~~~l~~----~~~~~~~~~-~~~~~~~~~d~vv~~   75 (450)
T PRK14106          4 KGKKVLVVGA-GVSGLALAKFLKKLGA--KVILTDEKEEDQLKEALEELGE----LGIELVLGE-YPEEFLEGVDLVVVS   75 (450)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCchHHHHHHHHHHHh----cCCEEEeCC-cchhHhhcCCEEEEC
Confidence            3569999999 8899999999999998  9999999752211   222321    122333221 112446789999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC--ChhHHHHHHHHHh
Q 017551           96 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN--STVPIAAEVFKKA  154 (369)
Q Consensus        96 ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~--~~t~i~ae~~~~~  154 (369)
                      +|.+...- .....-..+++++...+...... + ..+|-+|--.+  +++.+++.+|...
T Consensus        76 ~g~~~~~~-~~~~a~~~~i~~~~~~~~~~~~~-~-~~vI~ITGS~GKTTt~~~l~~iL~~~  133 (450)
T PRK14106         76 PGVPLDSP-PVVQAHKKGIEVIGEVELAYRFS-K-APIVAITGTNGKTTTTTLLGEIFKNA  133 (450)
T ss_pred             CCCCCCCH-HHHHHHHCCCcEEeHHHHHHhhc-C-CCEEEEeCCCchHHHHHHHHHHHHHc
Confidence            88753211 11111234666666655544422 2 34555554443  5556666666553

>PRK07985 oxidoreductase; Provisional

Probab=95.53  E-value=0.51  Score=45.20  Aligned_cols=115  Identities=18%  Similarity=0.142  Sum_probs=65.6

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--h-hHHHHhhcccCCCeEEEEe-CCCCh----------hhhc
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--P-GVTADISHMDTGAVVRGFL-GQPQL----------ENAL   86 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~-g~~~dL~~~~~~~~v~~~~-~t~dl----------~~al   86 (369)
                      +++.|+||+|++|..++..|+..|.  +|++.+.+..  . ....++.... ..++..+. .-+|.          .+.+
T Consensus        50 k~vlITGas~gIG~aia~~L~~~G~--~Vi~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  126 (294)
T PRK07985         50 RKALVTGGDSGIGRAAAIAYAREGA--DVAISYLPVEEEDAQDVKKIIEEC-GRKAVLLPGDLSDEKFARSLVHEAHKAL  126 (294)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCC--EEEEecCCcchhhHHHHHHHHHHc-CCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            5899999999999999999999987  8888876531  1 1111221111 12222211 11221          1223


Q ss_pred             CCCcEEEEcCCCCC--CC--CCCH---HHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 017551           87 TGMDLVIIPAGVPR--KP--GMTR---DDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  138 (369)
Q Consensus        87 ~~ADiVii~ag~p~--k~--g~~r---~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN  138 (369)
                      ...|++|..+|...  .+  ..+.   ...+..|+.....+.+.+..+. ..+.|+++|.
T Consensus       127 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS  186 (294)
T PRK07985        127 GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSS  186 (294)
T ss_pred             CCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECC
Confidence            56799999988632  11  2222   3345677765555555554432 3456777664

>PRK08264 short chain dehydrogenase; Validated

Probab=95.51  E-value=0.13  Score=47.07  Aligned_cols=113  Identities=13%  Similarity=0.077  Sum_probs=64.8

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe----CCCChhhhc---CCCcE
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL----GQPQLENAL---TGMDL   91 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~----~t~dl~~al---~~ADi   91 (369)
                      +.++|.|+||+|++|+.++..|+..+. .+|++++.+......   .    ...+..+.    ..+++.+.+   ...|+
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~-~~V~~~~r~~~~~~~---~----~~~~~~~~~D~~~~~~~~~~~~~~~~id~   76 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGA-AKVYAAARDPESVTD---L----GPRVVPLQLDVTDPASVAAAAEAASDVTI   76 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCc-ccEEEEecChhhhhh---c----CCceEEEEecCCCHHHHHHHHHhcCCCCE
Confidence            345899999999999999999998874 378889887522111   1    11222211    112233333   35899


Q ss_pred             EEEcCCCCCCC----CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCC
Q 017551           92 VIIPAGVPRKP----GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISNP  139 (369)
Q Consensus        92 Vii~ag~p~k~----g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP  139 (369)
                      ||..+|.+..+    ..+.   ...+..|......+.+.+...   ...+.++++|..
T Consensus        77 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~  134 (238)
T PRK08264         77 LVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSV  134 (238)
T ss_pred             EEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCh
Confidence            99999873221    1222   233456665555555554432   234556666643

>PRK07340 ornithine cyclodeaminase; Validated

Probab=95.51  E-value=0.051  Score=52.86  Aligned_cols=71  Identities=13%  Similarity=0.119  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      ...+|+|+|+ |.+|...+..+.....+.++.++|.+.  +...+.++...  ...+.    ..++++++.+||+||.+-
T Consensus       124 ~~~~v~IiGa-G~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~--~~~~~----~~~~~~av~~aDiVitaT  196 (304)
T PRK07340        124 PPGDLLLIGT-GVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARAL--GPTAE----PLDGEAIPEAVDLVVTAT  196 (304)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhc--CCeeE----ECCHHHHhhcCCEEEEcc
Confidence            3569999999 999999988886543346999999986  33344444422  12222    246778999999999974

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.51  E-value=0.043  Score=48.86  Aligned_cols=56  Identities=29%  Similarity=0.488  Sum_probs=44.7

Q ss_pred             CCCCEEEEEcCCCc-cHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           18 AAGFKVAILGAAGG-IGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        18 ~~~~KI~IiGA~G~-vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      -+..||.|||+ |. +|..++..|...+.  ++.+++.+.                       .++.+.+++||+||.+.
T Consensus        42 l~gk~vlViG~-G~~~G~~~a~~L~~~g~--~V~v~~r~~-----------------------~~l~~~l~~aDiVIsat   95 (168)
T cd01080          42 LAGKKVVVVGR-SNIVGKPLAALLLNRNA--TVTVCHSKT-----------------------KNLKEHTKQADIVIVAV   95 (168)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHhhCCC--EEEEEECCc-----------------------hhHHHHHhhCCEEEEcC
Confidence            45679999999 76 59989999988876  788888641                       35667899999999987


Q ss_pred             CCC
Q 017551           97 GVP   99 (369)
Q Consensus        97 g~p   99 (369)
                      +.|
T Consensus        96 ~~~   98 (168)
T cd01080          96 GKP   98 (168)
T ss_pred             CCC
Confidence            766

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.50  E-value=0.055  Score=46.68  Aligned_cols=57  Identities=26%  Similarity=0.417  Sum_probs=45.7

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      -+.++|+|+|.+..+|.+++..|...+.  .+.++|.+                       +.|+++++++||+||.+.|
T Consensus        26 ~~gk~v~VvGrs~~vG~pla~lL~~~ga--tV~~~~~~-----------------------t~~l~~~v~~ADIVvsAtg   80 (140)
T cd05212          26 LDGKKVLVVGRSGIVGAPLQCLLQRDGA--TVYSCDWK-----------------------TIQLQSKVHDADVVVVGSP   80 (140)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC--EEEEeCCC-----------------------CcCHHHHHhhCCEEEEecC
Confidence            3457999999988999999999987765  66666643                       2356788999999999987


Q ss_pred             CC
Q 017551           98 VP   99 (369)
Q Consensus        98 ~p   99 (369)
                      .|
T Consensus        81 ~~   82 (140)
T cd05212          81 KP   82 (140)
T ss_pred             CC
Confidence            66

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=95.49  E-value=0.13  Score=48.45  Aligned_cols=35  Identities=23%  Similarity=0.417  Sum_probs=31.4

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ..||+|+|+ |.+|+.++..|+..|. .++.|+|-+.
T Consensus        32 ~~~VliiG~-GglGs~va~~La~~Gv-g~i~lvD~D~   66 (245)
T PRK05690         32 AARVLVVGL-GGLGCAASQYLAAAGV-GTLTLVDFDT   66 (245)
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHcCC-CEEEEEcCCE
Confidence            469999999 9999999999999884 6999999875

>TIGR02992 ectoine_eutC ectoine utilization protein EutC

Probab=95.47  E-value=0.062  Score=52.79  Aligned_cols=72  Identities=17%  Similarity=0.242  Sum_probs=50.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      ..+++|||+ |..|...+..+.....+.+|.+++.+.  ....+.++.+.. ...+..   .+++++++.+||+|+.+-
T Consensus       129 ~~~v~iiGa-G~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~-g~~v~~---~~~~~~av~~aDiVvtaT  202 (326)
T TIGR02992       129 SSVVAIFGA-GMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLL-GIDVTA---ATDPRAAMSGADIIVTTT  202 (326)
T ss_pred             CcEEEEECC-CHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhc-CceEEE---eCCHHHHhccCCEEEEec
Confidence            469999999 999988888776544467999999987  334444454321 122332   357888999999999974

Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).

>PRK06125 short chain dehydrogenase; Provisional

Probab=95.46  E-value=0.58  Score=43.47  Aligned_cols=114  Identities=18%  Similarity=0.170  Sum_probs=65.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCChh------hhcCCCc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQLE------NALTGMD   90 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~dl~------~al~~AD   90 (369)
                      .+++.|+||+|.+|..++..|+..+.  +|++.|.+..  .....++.... ..++..+. .-+|.+      +.+...|
T Consensus         7 ~k~vlItG~~~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~g~id   83 (259)
T PRK06125          7 GKRVLITGASKGIGAAAAEAFAAEGC--HLHLVARDADALEALAADLRAAH-GVDVAVHALDLSSPEAREQLAAEAGDID   83 (259)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHHhCCCC
Confidence            46899999999999999999999887  9999998762  22222333211 12222221 112221      2346799


Q ss_pred             EEEEcCCCCC-CC--CCCH---HHHHHHHHHH----HHHHHHHHhhhCCCeEEEEec
Q 017551           91 LVIIPAGVPR-KP--GMTR---DDLFNINAGI----VRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        91 iVii~ag~p~-k~--g~~r---~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ++|..+|... .+  ..+.   ...+..|+.-    .+.+.+.+.+. ..+.++++|
T Consensus        84 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~is  139 (259)
T PRK06125         84 ILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKAR-GSGVIVNVI  139 (259)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEec
Confidence            9999988643 11  1222   2334556553    44444444433 235566655

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.46  E-value=0.13  Score=52.88  Aligned_cols=125  Identities=15%  Similarity=0.087  Sum_probs=70.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-h-hH-HHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-P-GV-TADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~-g~-~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      ..+|+|+|+ |.+|..++..|...|.  +|.++|.... . .. ...|...    .+..+.+.. . +...++|+||++.
T Consensus        16 ~~~v~viG~-G~~G~~~A~~L~~~G~--~V~~~d~~~~~~~~~~~~~l~~~----gv~~~~~~~-~-~~~~~~D~Vv~s~   86 (480)
T PRK01438         16 GLRVVVAGL-GVSGFAAADALLELGA--RVTVVDDGDDERHRALAAILEAL----GATVRLGPG-P-TLPEDTDLVVTSP   86 (480)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCchhhhHHHHHHHHHc----CCEEEECCC-c-cccCCCCEEEECC
Confidence            469999999 9999999999998887  8999997652 1 11 1223321    233333221 1 2356799999998


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHH--HHHhhhCCCeEEEEecCCCC--ChhHHHHHHHHHh
Q 017551           97 GVPRKPGMTRDDLFNINAGIVRTLC--EGIAKCCPNATVNLISNPVN--STVPIAAEVFKKA  154 (369)
Q Consensus        97 g~p~k~g~~r~~~~~~N~~i~~~i~--~~i~~~~p~a~viv~tNPv~--~~t~i~ae~~~~~  154 (369)
                      |++..... ....-..+++++.++-  ..+.....+..+|-+|--.+  +++.+++.+|+..
T Consensus        87 Gi~~~~~~-~~~a~~~gi~v~~~~e~~~~~~~~~~~~~~I~VTGTnGKTTTt~mi~~iL~~~  147 (480)
T PRK01438         87 GWRPDAPL-LAAAADAGIPVWGEVELAWRLRDPDRPAPWLAVTGTNGKTTTVQMLASMLRAA  147 (480)
T ss_pred             CcCCCCHH-HHHHHHCCCeecchHHHHHHhhhccCCCCEEEEeCCCcHHHHHHHHHHHHHHc
Confidence            88632211 1111234555554422  22211111334555654444  5667777777654

>PRK06141 ornithine cyclodeaminase; Validated

Probab=95.45  E-value=0.063  Score=52.42  Aligned_cols=72  Identities=14%  Similarity=0.225  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      ...+|+|||+ |.+|...+..+.....+.+|.++|++.  ....+.++.+.  ...+..   ..+.++++++||+|+.+-
T Consensus       124 ~~~~v~iiG~-G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~--g~~~~~---~~~~~~av~~aDIVi~aT  197 (314)
T PRK06141        124 DASRLLVVGT-GRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQ--GFDAEV---VTDLEAAVRQADIISCAT  197 (314)
T ss_pred             CCceEEEECC-cHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhc--CCceEE---eCCHHHHHhcCCEEEEee
Confidence            3569999999 999999987665533366999999976  33444444432  123343   245678999999997653

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=95.43  E-value=0.17  Score=51.49  Aligned_cols=67  Identities=24%  Similarity=0.223  Sum_probs=48.2

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      ...+|+|+|. |.+|..++..++..+.  +|+.+|++..+....   +.. ...  .    .+++++++++|+||.+.|.
T Consensus       211 ~Gk~VlViG~-G~IG~~vA~~lr~~Ga--~ViV~d~dp~ra~~A---~~~-G~~--v----~~l~eal~~aDVVI~aTG~  277 (425)
T PRK05476        211 AGKVVVVAGY-GDVGKGCAQRLRGLGA--RVIVTEVDPICALQA---AMD-GFR--V----MTMEEAAELGDIFVTATGN  277 (425)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEcCCchhhHHH---Hhc-CCE--e----cCHHHHHhCCCEEEECCCC
Confidence            4579999999 9999999999998887  899999987322111   111 111  1    1356788999999988664

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=95.43  E-value=0.037  Score=54.81  Aligned_cols=73  Identities=25%  Similarity=0.271  Sum_probs=44.3

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEE-EEeCCCchhHHH-H-hhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLH-LYDVVNTPGVTA-D-ISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~-L~D~~~~~g~~~-d-L~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      +||+|+||+|.+|..++..|...+.. +++ +++.+...+... + ..+......+...  ..+.++.++++|+||++.
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~-el~~l~~s~~sagk~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~DvVf~al   76 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEV-EITYLVSSRESAGKPVSEVHPHLRGLVDLNLE--PIDEEEIAEDADVVFLAL   76 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCc-eEEEEeccchhcCCChHHhCccccccCCceee--cCCHHHhhcCCCEEEECC
Confidence            58999999999999999999887654 555 778664222211 1 1111110112221  124444446999999974

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=95.40  E-value=0.16  Score=49.52  Aligned_cols=108  Identities=19%  Similarity=0.136  Sum_probs=70.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-----chhHHHHhhcccCCCeEEEEeC-CCC---hhhhc--CC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-----TPGVTADISHMDTGAVVRGFLG-QPQ---LENAL--TG   88 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-----~~g~~~dL~~~~~~~~v~~~~~-t~d---l~~al--~~   88 (369)
                      ...|.|+||+|+||++.++.|...+.  +++.+|...     ....+..+.+.  ...+.++.+ -.|   +++-+  ..
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy--~v~~vDNl~n~~~~sl~r~~~l~~~--~~~v~f~~~Dl~D~~~L~kvF~~~~   77 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGY--GVVIVDNLNNSYLESLKRVRQLLGE--GKSVFFVEGDLNDAEALEKLFSEVK   77 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCC--cEEEEecccccchhHHHHHHHhcCC--CCceEEEEeccCCHHHHHHHHhhcC
Confidence            35899999999999999999999998  999999865     12223334432  234444321 122   22222  35


Q ss_pred             CcEEEEcCCCCCC-CC-CCHHHHHHHHHHHHHHHHHHHhhhCCCe
Q 017551           89 MDLVIIPAGVPRK-PG-MTRDDLFNINAGIVRTLCEGIAKCCPNA  131 (369)
Q Consensus        89 ADiVii~ag~p~k-~g-~~r~~~~~~N~~i~~~i~~~i~~~~p~a  131 (369)
                      -|-|+..|+.... +. +.+..+...|+--...+.+.+.++.-..
T Consensus        78 fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~  122 (343)
T KOG1371|consen   78 FDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKA  122 (343)
T ss_pred             CceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCce
Confidence            6888887765432 11 2346666788888889999999887333

>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase

Probab=95.38  E-value=0.054  Score=52.02  Aligned_cols=60  Identities=18%  Similarity=0.307  Sum_probs=43.7

Q ss_pred             EEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           25 ILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        25 IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      |||. |.+|.+++..|...+.  +|.+||++...  ..++....    ...   +.++.++++++|+||+..
T Consensus         1 ~IGl-G~mG~~mA~~L~~~G~--~V~v~dr~~~~--~~~l~~~g----~~~---~~s~~~~~~~advVil~v   60 (288)
T TIGR01692         1 FIGL-GNMGGPMAANLLKAGH--PVRVFDLFPDA--VEEAVAAG----AQA---AASPAEAAEGADRVITML   60 (288)
T ss_pred             CCcc-cHhHHHHHHHHHhCCC--eEEEEeCCHHH--HHHHHHcC----Cee---cCCHHHHHhcCCEEEEeC
Confidence            5798 9999999999998887  89999987622  22232211    111   345678899999999984

This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=95.37  E-value=0.058  Score=54.81  Aligned_cols=103  Identities=18%  Similarity=0.233  Sum_probs=64.6

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchh--HHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP   95 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g--~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~   95 (369)
                      .+..+|+|+|+ |.+|..++..|...| +.+|+++|.+..+.  .+..+.     ..  ... ..++.+++.++|+||.+
T Consensus       178 l~~~~VlViGa-G~iG~~~a~~L~~~G-~~~V~v~~rs~~ra~~la~~~g-----~~--~i~-~~~l~~~l~~aDvVi~a  247 (417)
T TIGR01035       178 LKGKKALLIGA-GEMGELVAKHLLRKG-VGKILIANRTYERAEDLAKELG-----GE--AVK-FEDLEEYLAEADIVISS  247 (417)
T ss_pred             ccCCEEEEECC-hHHHHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHcC-----Ce--Eee-HHHHHHHHhhCCEEEEC
Confidence            34579999999 999999999998876 24899999875222  222221     11  111 23567889999999998


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCh
Q 017551           96 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNST  143 (369)
Q Consensus        96 ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~  143 (369)
                      .+.|..- .+.            +..+.....- ...+++-+++|-|+=
T Consensus       248 T~s~~~i-i~~------------e~l~~~~~~~~~~~~viDla~Prdid  283 (417)
T TIGR01035       248 TGAPHPI-VSK------------EDVERALRERTRPLFIIDIAVPRDVD  283 (417)
T ss_pred             CCCCCce-EcH------------HHHHHHHhcCCCCeEEEEeCCCCCCC
Confidence            6655310 111            1111111111 245888899998875

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=95.35  E-value=0.031  Score=52.25  Aligned_cols=36  Identities=19%  Similarity=0.259  Sum_probs=32.1

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ..+.+.|+||+|++|..++..|+..+.  ++++.|.+.
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~--~v~~~~~~~   43 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGA--NVVNADIHG   43 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCc
Confidence            346899999999999999999999987  899999875

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=95.35  E-value=0.27  Score=45.24  Aligned_cols=74  Identities=16%  Similarity=0.178  Sum_probs=45.3

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------c
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------L   86 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~---~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l   86 (369)
                      ++|.|+||+|++|+.++..|+..+.  ++++.+.+.   ......++....  .++..+. ..+|   ..++       +
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~   78 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGW--SVGINYARDAAAAEETADAVRAAG--GRACVVAGDVANEADVIAMFDAVQSAF   78 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhcC--CcEEEEEeccCCHHHHHHHHHHHHHhc
Confidence            4899999999999999999999886  777765433   222223333211  2222221 1122   2222       2


Q ss_pred             CCCcEEEEcCCC
Q 017551           87 TGMDLVIIPAGV   98 (369)
Q Consensus        87 ~~ADiVii~ag~   98 (369)
                      ...|+||..+|.
T Consensus        79 ~~id~li~~ag~   90 (248)
T PRK06947         79 GRLDALVNNAGI   90 (248)
T ss_pred             CCCCEEEECCcc
Confidence            468999999885

>PRK05693 short chain dehydrogenase; Provisional

Probab=95.35  E-value=0.068  Score=50.31  Aligned_cols=34  Identities=26%  Similarity=0.227  Sum_probs=30.6

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      +++.|+||+|++|..++..|+..+.  +|++.|.+.
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~--~V~~~~r~~   35 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGY--EVWATARKA   35 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCC--EEEEEeCCH
Confidence            4799999999999999999998887  899999875

>PRK13304 L-aspartate dehydrogenase; Reviewed

Probab=95.34  E-value=0.12  Score=49.30  Aligned_cols=67  Identities=19%  Similarity=0.342  Sum_probs=44.7

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCC-CCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~-~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      +||+|||. |.+|+.++..+...+ ...-+.++|.+...  +.++... ..  ...   .+++++.+.++|+|++++
T Consensus         2 mrIgIIG~-G~iG~~ia~~l~~~~~~~elv~v~d~~~~~--a~~~a~~-~~--~~~---~~~~~ell~~~DvVvi~a   69 (265)
T PRK13304          2 LKIGIVGC-GAIASLITKAILSGRINAELYAFYDRNLEK--AENLASK-TG--AKA---CLSIDELVEDVDLVVECA   69 (265)
T ss_pred             CEEEEECc-cHHHHHHHHHHHcCCCCeEEEEEECCCHHH--HHHHHHh-cC--Cee---ECCHHHHhcCCCEEEEcC
Confidence            69999999 999999998887764 23336688987522  1222221 11  122   246667679999999986

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=95.33  E-value=0.17  Score=47.40  Aligned_cols=115  Identities=17%  Similarity=0.256  Sum_probs=64.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCCh---hhh-------c
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENA-------L   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl---~~a-------l   86 (369)
                      .+++.|+||+|++|..++..|+..+.  ++++.|.+.  ......++...  ..++..+. .-+|.   +++       +
T Consensus        10 ~k~~lItGa~~~iG~~ia~~l~~~G~--~vv~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   85 (265)
T PRK07097         10 GKIALITGASYGIGFAIAKAYAKAGA--TIVFNDINQELVDKGLAAYREL--GIEAHGYVCDVTDEDGVQAMVSQIEKEV   85 (265)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            45899999999999999999999887  889998875  22222333321  12232221 11222   122       2


Q ss_pred             CCCcEEEEcCCCCC-CC--CCCH---HHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecCC
Q 017551           87 TGMDLVIIPAGVPR-KP--GMTR---DDLFNINAGI----VRTLCEGIAKCCPNATVNLISNP  139 (369)
Q Consensus        87 ~~ADiVii~ag~p~-k~--g~~r---~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNP  139 (369)
                      ...|++|..+|... .+  ..+.   ...+..|..-    .+.+.+.+.+ ...+.+++++..
T Consensus        86 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~g~iv~isS~  147 (265)
T PRK07097         86 GVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIK-KGHGKIINICSM  147 (265)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh-cCCcEEEEEcCc
Confidence            45799999988632 11  1121   2234455443    3344444433 345667776654

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.33  E-value=0.051  Score=52.43  Aligned_cols=58  Identities=17%  Similarity=0.359  Sum_probs=45.9

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      -+..+|+|||+|+.+|.+++..|...+.  .+..++..                       |.++.+.+++||+||.+.|
T Consensus       156 l~Gk~vvVIGrs~~VG~pla~lL~~~ga--tVtv~~s~-----------------------t~~l~~~~~~ADIVIsAvg  210 (286)
T PRK14175        156 LEGKNAVVIGRSHIVGQPVSKLLLQKNA--SVTILHSR-----------------------SKDMASYLKDADVIVSAVG  210 (286)
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHHCCC--eEEEEeCC-----------------------chhHHHHHhhCCEEEECCC
Confidence            4467999999955599999999998775  77766632                       2357788999999999988


Q ss_pred             CCC
Q 017551           98 VPR  100 (369)
Q Consensus        98 ~p~  100 (369)
                      .|.
T Consensus       211 ~p~  213 (286)
T PRK14175        211 KPG  213 (286)
T ss_pred             CCc
Confidence            763

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.32  E-value=0.14  Score=46.79  Aligned_cols=107  Identities=19%  Similarity=0.164  Sum_probs=62.4

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC-CCC----hhhhcCCCcEEEE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QPQ----LENALTGMDLVII   94 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~-t~d----l~~al~~ADiVii   94 (369)
                      .+++.|+||+|++|+.++..|++.+.  ++++.|.+....    .     ..++..... -++    ..+.+...|+||.
T Consensus         5 ~k~~lVtGas~~iG~~ia~~l~~~G~--~v~~~~r~~~~~----~-----~~~~~~~~~D~~~~~~~~~~~~~~id~lv~   73 (235)
T PRK06550          5 TKTVLITGAASGIGLAQARAFLAQGA--QVYGVDKQDKPD----L-----SGNFHFLQLDLSDDLEPLFDWVPSVDILCN   73 (235)
T ss_pred             CCEEEEcCCCchHHHHHHHHHHHCCC--EEEEEeCCcccc----c-----CCcEEEEECChHHHHHHHHHhhCCCCEEEE
Confidence            35899999999999999999999887  899999875211    0     011222110 011    1233567899999


Q ss_pred             cCCCCC--CC--CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEec
Q 017551           95 PAGVPR--KP--GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLIS  137 (369)
Q Consensus        95 ~ag~p~--k~--g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~t  137 (369)
                      .+|...  .+  ..+.   ...+..|+.-...+.+.+...   .+.+.+++++
T Consensus        74 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~s  126 (235)
T PRK06550         74 TAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMC  126 (235)
T ss_pred             CCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEc
Confidence            998642  12  1222   234556655444444444322   2334565554

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=95.30  E-value=0.081  Score=51.91  Aligned_cols=73  Identities=25%  Similarity=0.322  Sum_probs=48.1

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHh-CCCCcEEEEEeCCCchhHH-HHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKI-NPLVSVLHLYDVVNTPGVT-ADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~-~~~~~el~L~D~~~~~g~~-~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      ++||+|+||+|.||+.+...|.. +..+.++.++=.....|.. .++..-..  .+...  ..|. ..++++|+|+.++|
T Consensus         1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~rSaG~~~~~f~~~~~--~v~~~--~~~~-~~~~~~Divf~~ag   75 (334)
T COG0136           1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASARSAGKKYIEFGGKSI--GVPED--AADE-FVFSDVDIVFFAAG   75 (334)
T ss_pred             CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEecccccCCccccccCccc--cCccc--cccc-cccccCCEEEEeCc
Confidence            36999999999999999999998 5677778888776533332 33332111  11100  1222 45779999999875

>PRK07578 short chain dehydrogenase; Provisional

Probab=95.28  E-value=0.063  Score=48.00  Aligned_cols=104  Identities=21%  Similarity=0.223  Sum_probs=58.5

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  100 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p~  100 (369)
                      |++.|+||+|++|..++..|+++   .+|++.+.+.. ....|+.+...   ++      ...+.+...|++|..+|...
T Consensus         1 ~~vlItGas~giG~~la~~l~~~---~~vi~~~r~~~-~~~~D~~~~~~---~~------~~~~~~~~id~lv~~ag~~~   67 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR---HEVITAGRSSG-DVQVDITDPAS---IR------ALFEKVGKVDAVVSAAGKVH   67 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc---CcEEEEecCCC-ceEecCCChHH---HH------HHHHhcCCCCEEEECCCCCC
Confidence            58999999999999999999887   38899887541 11122222110   00      01122347899999998643


Q ss_pred             C-C--CCCHHH---HHHHHHHHHHHHHHHHhhhC-CCeEEEEec
Q 017551          101 K-P--GMTRDD---LFNINAGIVRTLCEGIAKCC-PNATVNLIS  137 (369)
Q Consensus       101 k-~--g~~r~~---~~~~N~~i~~~i~~~i~~~~-p~a~viv~t  137 (369)
                      . +  ..+..+   .+..|+.....+.+....+- +.+.++++|
T Consensus        68 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is  111 (199)
T PRK07578         68 FAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTS  111 (199)
T ss_pred             CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEc
Confidence            1 1  123222   24455544444444443322 345555554

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=95.27  E-value=0.06  Score=51.50  Aligned_cols=71  Identities=24%  Similarity=0.212  Sum_probs=46.1

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhC-CCCcEE-EEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKIN-PLVSVL-HLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP   95 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~-~~~~el-~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~   95 (369)
                      .+++||+|||. |.+|+.++..|... +.. +| .++|.+...  +.++....  .....   .+++++.+.++|+|+++
T Consensus         4 m~~irIGIIG~-G~IG~~~a~~L~~~~~~~-el~aV~dr~~~~--a~~~a~~~--g~~~~---~~~~eell~~~D~Vvi~   74 (271)
T PRK13302          4 RPELRVAIAGL-GAIGKAIAQALDRGLPGL-TLSAVAVRDPQR--HADFIWGL--RRPPP---VVPLDQLATHADIVVEA   74 (271)
T ss_pred             CCeeEEEEECc-cHHHHHHHHHHHhcCCCe-EEEEEECCCHHH--HHHHHHhc--CCCcc---cCCHHHHhcCCCEEEEC
Confidence            44689999999 99999999888764 322 55 488987522  22222211  00111   24567778999999999


Q ss_pred             CC
Q 017551           96 AG   97 (369)
Q Consensus        96 ag   97 (369)
                      ++
T Consensus        75 tp   76 (271)
T PRK13302         75 AP   76 (271)
T ss_pred             CC
Confidence            63

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=95.27  E-value=0.052  Score=57.78  Aligned_cols=138  Identities=17%  Similarity=0.212  Sum_probs=83.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCCh---h-hhcCCCcEEEEc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQL---E-NALTGMDLVIIP   95 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl---~-~al~~ADiVii~   95 (369)
                      ..+|.|+|. |.+|+.++..|..++.  +++++|.|+..  +..+.+.. ..-+.+.  .++.   + ..+++||.||++
T Consensus       400 ~~~vII~G~-Gr~G~~va~~L~~~g~--~vvvID~d~~~--v~~~~~~g-~~v~~GD--at~~~~L~~agi~~A~~vv~~  471 (601)
T PRK03659        400 KPQVIIVGF-GRFGQVIGRLLMANKM--RITVLERDISA--VNLMRKYG-YKVYYGD--ATQLELLRAAGAEKAEAIVIT  471 (601)
T ss_pred             cCCEEEecC-chHHHHHHHHHHhCCC--CEEEEECCHHH--HHHHHhCC-CeEEEee--CCCHHHHHhcCCccCCEEEEE
Confidence            468999999 9999999999998888  89999998622  22233322 1222332  2332   1 236799999998


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEE-ecCCCCChhHHHHHHHHHhCCCCCCcEEEechhcHHHHH
Q 017551           96 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL-ISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRAN  174 (369)
Q Consensus        96 ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv-~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t~Ld~~R~~  174 (369)
                      -+-+           ..|.    .++..+++.+|+..++. +.||.+.      +.+++.+   .+.++-=+..-+.++-
T Consensus       472 ~~d~-----------~~n~----~i~~~~r~~~p~~~IiaRa~~~~~~------~~L~~~G---a~~vv~e~~es~l~l~  527 (601)
T PRK03659        472 CNEP-----------EDTM----KIVELCQQHFPHLHILARARGRVEA------HELLQAG---VTQFSRETFSSALELG  527 (601)
T ss_pred             eCCH-----------HHHH----HHHHHHHHHCCCCeEEEEeCCHHHH------HHHHhCC---CCEEEccHHHHHHHHH
Confidence            4211           3343    45566778889976544 4565433      3345543   2455433433334444


Q ss_pred             HHHHHHhCCCCCCCc
Q 017551          175 TFVAEVLGLDPRDVD  189 (369)
Q Consensus       175 ~~la~~lgv~~~~V~  189 (369)
                      ...=..+|+++++++
T Consensus       528 ~~~L~~lg~~~~~~~  542 (601)
T PRK03659        528 RKTLVSLGMHPHQAQ  542 (601)
T ss_pred             HHHHHHcCCCHHHHH
Confidence            555577788876653

>PRK12743 oxidoreductase; Provisional

Probab=95.26  E-value=0.6  Score=43.36  Aligned_cols=114  Identities=14%  Similarity=0.155  Sum_probs=63.7

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHhhcccCCCeEEEEe-CCCCh---hhh-------c
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQL---ENA-------L   86 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~---~~g~~~dL~~~~~~~~v~~~~-~t~dl---~~a-------l   86 (369)
                      .+|.|+||+|++|+.++..|+..|.  +|++.+...   ......++....  .++..+. .-++.   +.+       +
T Consensus         3 k~vlItGas~giG~~~a~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~   78 (256)
T PRK12743          3 QVAIVTASDSGIGKACALLLAQQGF--DIGITWHSDEEGAKETAEEVRSHG--VRAEIRQLDLSDLPEGAQALDKLIQRL   78 (256)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCChHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4899999999999999999999987  888776433   222223333221  2222221 11222   111       2


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhh----hCCCeEEEEecC
Q 017551           87 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAK----CCPNATVNLISN  138 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~~i~~~i~~----~~p~a~viv~tN  138 (369)
                      ...|+||..+|.....   ..+   ....+..|......+.+.+..    ....+.++++|.
T Consensus        79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS  140 (256)
T PRK12743         79 GRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITS  140 (256)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEee
Confidence            4579999998864321   112   233455565544445444333    223456776654

>PRK06940 short chain dehydrogenase; Provisional

Probab=95.26  E-value=0.19  Score=47.58  Aligned_cols=110  Identities=19%  Similarity=0.236  Sum_probs=61.2

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhh------cCCC
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENA------LTGM   89 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a------l~~A   89 (369)
                      .+.|+|| |++|..++..|. .+.  +|++.|.+..  .....++.+.  ..++..+. .-+|   .+++      +...
T Consensus         4 ~~lItGa-~gIG~~la~~l~-~G~--~Vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~i   77 (275)
T PRK06940          4 VVVVIGA-GGIGQAIARRVG-AGK--KVLLADYNEENLEAAAKTLREA--GFDVSTQEVDVSSRESVKALAATAQTLGPV   77 (275)
T ss_pred             EEEEECC-ChHHHHHHHHHh-CCC--EEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHHHHHHHhcCCC
Confidence            4566666 899999999985 565  9999998752  2222233321  12222221 1122   2222      2468


Q ss_pred             cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 017551           90 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  138 (369)
Q Consensus        90 DiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN  138 (369)
                      |++|..||... ........+..|+.-...+.+.+...- +++.+++++.
T Consensus        78 d~li~nAG~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS  126 (275)
T PRK06940         78 TGLVHTAGVSP-SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIAS  126 (275)
T ss_pred             CEEEECCCcCC-chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEe
Confidence            99999998753 123345566777666555555554432 2344455543

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=95.21  E-value=0.12  Score=47.68  Aligned_cols=35  Identities=29%  Similarity=0.286  Sum_probs=31.4

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      .+++.|+||+|++|+.++..|+..+.  +++++|.+.
T Consensus         8 ~k~vlItGas~~iG~~la~~l~~~G~--~v~~~~~~~   42 (252)
T PRK08220          8 GKTVWVTGAAQGIGYAVALAFVEAGA--KVIGFDQAF   42 (252)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEecch
Confidence            45899999999999999999999887  999999865

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=95.20  E-value=0.13  Score=52.15  Aligned_cols=90  Identities=21%  Similarity=0.169  Sum_probs=60.7

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch-hHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~-g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      ...+|+|+|+ |.+|..++..++..|.  +++.+|++..+ ..+..+     ...+      .+++++++++|+||.+.|
T Consensus       201 ~GktVvViG~-G~IG~~va~~ak~~Ga--~ViV~d~d~~R~~~A~~~-----G~~~------~~~~e~v~~aDVVI~atG  266 (413)
T cd00401         201 AGKVAVVAGY-GDVGKGCAQSLRGQGA--RVIVTEVDPICALQAAME-----GYEV------MTMEEAVKEGDIFVTTTG  266 (413)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEECChhhHHHHHhc-----CCEE------ccHHHHHcCCCEEEECCC
Confidence            4579999999 9999999999998887  78899998732 222221     1111      123578899999999865


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC
Q 017551           98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP  139 (369)
Q Consensus        98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP  139 (369)
                      .+               .++..  ..++...+.+++++++.+
T Consensus       267 ~~---------------~~i~~--~~l~~mk~GgilvnvG~~  291 (413)
T cd00401         267 NK---------------DIITG--EHFEQMKDGAIVCNIGHF  291 (413)
T ss_pred             CH---------------HHHHH--HHHhcCCCCcEEEEeCCC
Confidence            33               11211  124444578899899865

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK12747 short chain dehydrogenase; Provisional

Probab=95.17  E-value=0.6  Score=43.13  Aligned_cols=34  Identities=21%  Similarity=0.258  Sum_probs=29.3

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV   55 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~   55 (369)
                      .+.+.|+||+|++|..++..|+..|.  +|++.+..
T Consensus         4 ~k~~lItGas~gIG~~ia~~l~~~G~--~v~~~~~~   37 (252)
T PRK12747          4 GKVALVTGASRGIGRAIAKRLANDGA--LVAIHYGN   37 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC--eEEEEcCC
Confidence            45899999999999999999999987  78887543

>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein

Probab=95.16  E-value=0.16  Score=49.68  Aligned_cols=66  Identities=15%  Similarity=0.186  Sum_probs=45.6

Q ss_pred             CEEEEEcCCCc--------------------cHHHHHHHHHhCCCCcEEEEEeCCCc---hhHHHHhhcccCCCeEEEEe
Q 017551           21 FKVAILGAAGG--------------------IGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL   77 (369)
Q Consensus        21 ~KI~IiGA~G~--------------------vGs~la~~l~~~~~~~el~L~D~~~~---~g~~~dL~~~~~~~~v~~~~   77 (369)
                      |||+|-|| |+                    -|+++|..|+..|+  +|++||++..   ......+.+..    ...  
T Consensus         1 ~~~~~~g~-gnq~ly~~~~~~~~~~gg~~p~gGspMArnLlkAGh--eV~V~Drnrsa~e~e~~e~LaeaG----A~~--   71 (341)
T TIGR01724         1 MKVSVYGA-GNQKLYTDELNLPEKFGGEPPYGGSRMAIEFAMAGH--DVVLAEPNREFMSDDLWKKVEDAG----VKV--   71 (341)
T ss_pred             CeeEEecC-cchhHHHHHhCChhhcCCCCCCCHHHHHHHHHHCCC--EEEEEeCChhhhhhhhhHHHHHCC----Cee--
Confidence            68888888 64                    27788888888888  9999998752   12223344321    121  


Q ss_pred             CCCChhhhcCCCcEEEEcC
Q 017551           78 GQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        78 ~t~dl~~al~~ADiVii~a   96 (369)
                       .++..++.++||+||+.-
T Consensus        72 -AaS~aEAAa~ADVVIL~L   89 (341)
T TIGR01724        72 -VSDDKEAAKHGEIHVLFT   89 (341)
T ss_pred             -cCCHHHHHhCCCEEEEec
Confidence             234678999999999983

This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.16  E-value=0.23  Score=47.94  Aligned_cols=79  Identities=27%  Similarity=0.386  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHhhcccCCCeEEEEe-CCCC---hhhh------
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENA------   85 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~---~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a------   85 (369)
                      +.+++.|+||+|++|..++..|+..+.  ++++.|...   ....+.++...  ..++..+. .-+|   ..+.      
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga--~Vv~~~~~~~~~~~~~~~~i~~~--g~~~~~~~~Dv~d~~~~~~~~~~~~~   86 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGA--TVVVNDVASALDASDVLDEIRAA--GAKAVAVAGDISQRATADELVATAVG   86 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC--EEEEecCCchhHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence            346899999999999999999999887  899999754   22223333321  22333221 1122   1121      


Q ss_pred             cCCCcEEEEcCCCCCC
Q 017551           86 LTGMDLVIIPAGVPRK  101 (369)
Q Consensus        86 l~~ADiVii~ag~p~k  101 (369)
                      +...|++|..+|..+.
T Consensus        87 ~g~iD~li~nAG~~~~  102 (306)
T PRK07792         87 LGGLDIVVNNAGITRD  102 (306)
T ss_pred             hCCCCEEEECCCCCCC
Confidence            2468999999997653

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.15  E-value=0.22  Score=50.64  Aligned_cols=116  Identities=20%  Similarity=0.245  Sum_probs=67.6

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCChhhh-------cCCCcE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQLENA-------LTGMDL   91 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~dl~~a-------l~~ADi   91 (369)
                      ..++.|+||+|++|..++..|+..+.  +++++|.........++........+.... ...+.++.       +...|+
T Consensus       210 g~~vlItGasggIG~~la~~l~~~Ga--~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  287 (450)
T PRK08261        210 GKVALVTGAARGIGAAIAEVLARDGA--HVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDI  287 (450)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCC--EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            46899999999999999999999887  899999854221122222111011122111 11111111       236899


Q ss_pred             EEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEec
Q 017551           92 VIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLIS  137 (369)
Q Consensus        92 Vii~ag~p~k~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~t  137 (369)
                      ||..+|.....   .++   ....+..|+.-...+.+.+...   .+.+.++++|
T Consensus       288 vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~S  342 (450)
T PRK08261        288 VVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVS  342 (450)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEEC
Confidence            99999875421   122   2334567777666776666542   2446677765

>PRK07201 short chain dehydrogenase; Provisional

Probab=95.13  E-value=0.2  Score=53.36  Aligned_cols=113  Identities=18%  Similarity=0.199  Sum_probs=65.6

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT------   87 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~------   87 (369)
                      .+++.|+||+|++|..++..|+..|.  +|++++.+..  .....++...  ..++..+. .-+|   .+++++      
T Consensus       371 ~k~vlItGas~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  446 (657)
T PRK07201        371 GKVVLITGASSGIGRATAIKVAEAGA--TVFLVARNGEALDELVAEIRAK--GGTAHAYTCDLTDSAAVDHTVKDILAEH  446 (657)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            46899999999999999999999987  8999998762  2222333221  12232221 1122   223333      


Q ss_pred             -CCcEEEEcCCCCCCCC---C-----CHHHHHHHHHHHHHHH----HHHHhhhCCCeEEEEec
Q 017551           88 -GMDLVIIPAGVPRKPG---M-----TRDDLFNINAGIVRTL----CEGIAKCCPNATVNLIS  137 (369)
Q Consensus        88 -~ADiVii~ag~p~k~g---~-----~r~~~~~~N~~i~~~i----~~~i~~~~p~a~viv~t  137 (369)
                       ..|++|..||......   .     .....+..|+.....+    .+.+.+. ..+.++++|
T Consensus       447 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~is  508 (657)
T PRK07201        447 GHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRER-RFGHVVNVS  508 (657)
T ss_pred             CCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-CCCEEEEEC
Confidence             6899999998642211   1     1223455665544444    4444433 345566665

>PRK08177 short chain dehydrogenase; Provisional

Probab=95.13  E-value=0.11  Score=47.46  Aligned_cols=34  Identities=18%  Similarity=0.073  Sum_probs=31.2

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ++|.|+||+|++|+.++..|+..+.  +|+++|.+.
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~--~V~~~~r~~   35 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGW--QVTATVRGP   35 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCC--EEEEEeCCC
Confidence            4799999999999999999999887  999999876

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.13  E-value=0.066  Score=51.61  Aligned_cols=57  Identities=19%  Similarity=0.350  Sum_probs=44.8

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      -+.++|+|||.|+.+|.+++.+|...+.  .+.+++.                       .|.|+.+.++.||+||.+.|
T Consensus       156 l~Gk~vvViGrs~iVGkPla~lL~~~~a--tVt~~hs-----------------------~t~~l~~~~~~ADIVV~avG  210 (285)
T PRK14189        156 LRGAHAVVIGRSNIVGKPMAMLLLQAGA--TVTICHS-----------------------KTRDLAAHTRQADIVVAAVG  210 (285)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCCC--EEEEecC-----------------------CCCCHHHHhhhCCEEEEcCC
Confidence            3457999999977789999999988775  5555321                       14578888999999999988


Q ss_pred             CC
Q 017551           98 VP   99 (369)
Q Consensus        98 ~p   99 (369)
                      .|
T Consensus       211 ~~  212 (285)
T PRK14189        211 KR  212 (285)
T ss_pred             Cc
Confidence            55

>COG2344 AT-rich DNA-binding protein [General function prediction only]

Probab=95.11  E-value=0.069  Score=48.16  Aligned_cols=100  Identities=19%  Similarity=0.292  Sum_probs=67.5

Q ss_pred             CCCCCEEEEEcCCCccHHHHHH-HHHhCCCCcEEEEEeCCCc-hhHHHHhhcccCCCeEEEEeCCCChhhhcC--CCcEE
Q 017551           17 GAAGFKVAILGAAGGIGQPLAM-LMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLV   92 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~-~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~~~~v~~~~~t~dl~~al~--~ADiV   92 (369)
                      ..+..+|.|||+ |++|.+++. ....+.-..-+-.+|+++. -|.      ..  ..+.+. .-++++.-++  |.|+.
T Consensus        81 ~~~~tnviiVG~-GnlG~All~Y~f~~~~~~~iv~~FDv~~~~VG~------~~--~~v~V~-~~d~le~~v~~~dv~ia  150 (211)
T COG2344          81 QDKTTNVIIVGV-GNLGRALLNYNFSKKNGMKIVAAFDVDPDKVGT------KI--GDVPVY-DLDDLEKFVKKNDVEIA  150 (211)
T ss_pred             CCcceeEEEEcc-ChHHHHHhcCcchhhcCceEEEEecCCHHHhCc------cc--CCeeee-chHHHHHHHHhcCccEE
Confidence            445679999999 999999985 5555555667889999862 111      00  123322 1245666665  88899


Q ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChh
Q 017551           93 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTV  144 (369)
Q Consensus        93 ii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t  144 (369)
                      |++.  |              ..-.+++++.+-+.+=++ |+++| |+.+.+
T Consensus       151 iLtV--P--------------a~~AQ~vad~Lv~aGVkG-IlNFt-Pv~l~~  184 (211)
T COG2344         151 ILTV--P--------------AEHAQEVADRLVKAGVKG-ILNFT-PVRLQV  184 (211)
T ss_pred             EEEc--c--------------HHHHHHHHHHHHHcCCce-EEecc-ceEecC
Confidence            9983  4              344668888888888888 67777 887765

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.11  E-value=0.12  Score=47.17  Aligned_cols=71  Identities=14%  Similarity=0.092  Sum_probs=46.5

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      +.+||.|||| |.+|...+..|...+.  +|++++.+... ...++.+.   ..+......-+ ++.+.++|+||.+-+
T Consensus         9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga--~V~VIs~~~~~-~l~~l~~~---~~i~~~~~~~~-~~~l~~adlViaaT~   79 (202)
T PRK06718          9 SNKRVVIVGG-GKVAGRRAITLLKYGA--HIVVISPELTE-NLVKLVEE---GKIRWKQKEFE-PSDIVDAFLVIAATN   79 (202)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC--eEEEEcCCCCH-HHHHHHhC---CCEEEEecCCC-hhhcCCceEEEEcCC
Confidence            3569999999 9999999998888885  89999864322 22233322   12222211111 356899999888743

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.11  E-value=0.062  Score=51.84  Aligned_cols=57  Identities=19%  Similarity=0.392  Sum_probs=44.8

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      -+.++|+|+|++|.+|.++++.|+..+.  +|.+++..                       +.++.+.+++||+||.+.|
T Consensus       157 l~Gk~vvViG~gg~vGkpia~~L~~~ga--tVtv~~~~-----------------------t~~L~~~~~~aDIvI~AtG  211 (283)
T PRK14192        157 LAGKHAVVVGRSAILGKPMAMMLLNANA--TVTICHSR-----------------------TQNLPELVKQADIIVGAVG  211 (283)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCCC--EEEEEeCC-----------------------chhHHHHhccCCEEEEccC
Confidence            4557999999944599999999998876  88888741                       2356677899999999986


Q ss_pred             CC
Q 017551           98 VP   99 (369)
Q Consensus        98 ~p   99 (369)
                      .|
T Consensus       212 ~~  213 (283)
T PRK14192        212 KP  213 (283)
T ss_pred             CC
Confidence            44

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=95.06  E-value=0.45  Score=47.02  Aligned_cols=130  Identities=20%  Similarity=0.190  Sum_probs=76.8

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcccCCCeEEEEeCCCChhhhcCC-CcEEEE
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLENALTG-MDLVII   94 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~-ADiVii   94 (369)
                      ..+..+|+|+|+ |.+|......++..+.  +++.+|+++. ...+.+|.-     +....+...|..+++++ +|+|+.
T Consensus       164 ~~pG~~V~I~G~-GGlGh~avQ~Aka~ga--~Via~~~~~~K~e~a~~lGA-----d~~i~~~~~~~~~~~~~~~d~ii~  235 (339)
T COG1064         164 VKPGKWVAVVGA-GGLGHMAVQYAKAMGA--EVIAITRSEEKLELAKKLGA-----DHVINSSDSDALEAVKEIADAIID  235 (339)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHcCC--eEEEEeCChHHHHHHHHhCC-----cEEEEcCCchhhHHhHhhCcEEEE
Confidence            455689999999 8999888887776774  9999999873 233444421     11111111233344443 999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC-CC-h-hHHHHHHHHHhCCCCCCcEEEec---hh
Q 017551           95 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV-NS-T-VPIAAEVFKKAGTYDPKKLLGVT---ML  168 (369)
Q Consensus        95 ~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv-~~-~-t~i~ae~~~~~~~~~~~kviG~t---~L  168 (369)
                      +++ +.                  .+-..++...+++.++.+.+|- .. . .+.. ..     -+...+|.|..   .-
T Consensus       236 tv~-~~------------------~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~-~l-----i~~~~~i~GS~~g~~~  290 (339)
T COG1064         236 TVG-PA------------------TLEPSLKALRRGGTLVLVGLPGGGPIPLLPAF-LL-----ILKEISIVGSLVGTRA  290 (339)
T ss_pred             CCC-hh------------------hHHHHHHHHhcCCEEEEECCCCCcccCCCCHH-Hh-----hhcCeEEEEEecCCHH
Confidence            975 31                  2223344445899999999994 33 2 1111 11     13346888883   24


Q ss_pred             cHHHHHHHHHH
Q 017551          169 DVVRANTFVAE  179 (369)
Q Consensus       169 d~~R~~~~la~  179 (369)
                      |..-+.++.++
T Consensus       291 d~~e~l~f~~~  301 (339)
T COG1064         291 DLEEALDFAAE  301 (339)
T ss_pred             HHHHHHHHHHh
Confidence            44434444433

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=95.06  E-value=0.1  Score=53.70  Aligned_cols=91  Identities=21%  Similarity=0.233  Sum_probs=61.8

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchh-HHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG-VTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g-~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      -..++|+|+|. |.||..++..+...+.  +|..+|++.... .+..  +   ..  .    ..+++++++.||+||.+.
T Consensus       252 LaGKtVgVIG~-G~IGr~vA~rL~a~Ga--~ViV~e~dp~~a~~A~~--~---G~--~----~~~leell~~ADIVI~at  317 (476)
T PTZ00075        252 IAGKTVVVCGY-GDVGKGCAQALRGFGA--RVVVTEIDPICALQAAM--E---GY--Q----VVTLEDVVETADIFVTAT  317 (476)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCchhHHHHHh--c---Cc--e----eccHHHHHhcCCEEEECC
Confidence            34579999999 9999999999997776  899999876322 1111  1   11  1    124678899999999985


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC
Q 017551           97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP  139 (369)
Q Consensus        97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP  139 (369)
                      |.+               .++.  .+.+...-|.+++++++-.
T Consensus       318 Gt~---------------~iI~--~e~~~~MKpGAiLINvGr~  343 (476)
T PTZ00075        318 GNK---------------DIIT--LEHMRRMKNNAIVGNIGHF  343 (476)
T ss_pred             Ccc---------------cccC--HHHHhccCCCcEEEEcCCC
Confidence            422               1111  1344445589999998754

>PRK06123 short chain dehydrogenase; Provisional

Probab=95.06  E-value=0.36  Score=44.30  Aligned_cols=114  Identities=18%  Similarity=0.171  Sum_probs=62.4

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHhhcccCCCeEEEEe----CCCChhhhc-------C
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL----GQPQLENAL-------T   87 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~---~~g~~~dL~~~~~~~~v~~~~----~t~dl~~al-------~   87 (369)
                      .+.|+||+|++|+.++..|+..+.  .+++.+.+.   ......++....  ..+..+.    ...++.+++       .
T Consensus         4 ~~lVtG~~~~iG~~~a~~l~~~G~--~vv~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06123          4 VMIITGASRGIGAATALLAAERGY--AVCLNYLRNRDAAEAVVQAIRRQG--GEALAVAADVADEADVLRLFEAVDRELG   79 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCC--eEEEecCCCHHHHHHHHHHHHhCC--CcEEEEEeccCCHHHHHHHHHHHHHHhC
Confidence            689999999999999999998886  777877543   122222232211  1222111    112222333       3


Q ss_pred             CCcEEEEcCCCCCCC----CCCH---HHHHHHHHHHHHHHHHHHhhh----C--CCeEEEEecCC
Q 017551           88 GMDLVIIPAGVPRKP----GMTR---DDLFNINAGIVRTLCEGIAKC----C--PNATVNLISNP  139 (369)
Q Consensus        88 ~ADiVii~ag~p~k~----g~~r---~~~~~~N~~i~~~i~~~i~~~----~--p~a~viv~tNP  139 (369)
                      ..|+||..+|.....    ..+.   ...+..|+.....+.+...++    .  .++.++++|..
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~  144 (248)
T PRK06123         80 RLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSM  144 (248)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECch
Confidence            679999999864321    1222   234566666544444443322    1  13556666653

>PRK08862 short chain dehydrogenase; Provisional

Probab=95.05  E-value=0.73  Score=42.47  Aligned_cols=115  Identities=12%  Similarity=0.078  Sum_probs=65.1

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hh-------hhc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LE-------NAL   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~-------~al   86 (369)
                      .+.+.|+||++.+|..++..|++.+.  +|++.+.+.  ......++....  ..+..+. ..+|   .+       +.+
T Consensus         5 ~k~~lVtGas~GIG~aia~~la~~G~--~V~~~~r~~~~l~~~~~~i~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (227)
T PRK08862          5 SSIILITSAGSVLGRTISCHFARLGA--TLILCDQDQSALKDTYEQCSALT--DNVYSFQLKDFSQESIRHLFDAIEQQF   80 (227)
T ss_pred             CeEEEEECCccHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhcC--CCeEEEEccCCCHHHHHHHHHHHHHHh
Confidence            45899999999999999999999987  899999876  222222332211  1222221 1112   21       122


Q ss_pred             C-CCcEEEEcCCCCCCCC----CCHHH---HHHHHH----HHHHHHHHHHhhhCCCeEEEEecC
Q 017551           87 T-GMDLVIIPAGVPRKPG----MTRDD---LFNINA----GIVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        87 ~-~ADiVii~ag~p~k~g----~~r~~---~~~~N~----~i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      . .-|++|..+|....++    .+..+   .+..|.    .+.+.+.+.+.+....+.|+++|.
T Consensus        81 g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS  144 (227)
T PRK08862         81 NRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVIS  144 (227)
T ss_pred             CCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEec
Confidence            3 6899999987432221    22222   223332    334455566655444566777764

>PRK07589 ornithine cyclodeaminase; Validated

Probab=95.03  E-value=0.096  Score=51.97  Aligned_cols=71  Identities=18%  Similarity=0.295  Sum_probs=50.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      ...++|||+ |..+...+..+..-..+.+|.+||.+.  ....+.++.+.  ..++..   .++.++++++||+|+.+-
T Consensus       129 a~~l~iiGa-G~QA~~~l~a~~~vr~i~~V~v~~r~~~~a~~~~~~~~~~--~~~v~~---~~~~~~av~~ADIIvtaT  201 (346)
T PRK07589        129 SRTMALIGN-GAQSEFQALAFKALLGIEEIRLYDIDPAATAKLARNLAGP--GLRIVA---CRSVAEAVEGADIITTVT  201 (346)
T ss_pred             CcEEEEECC-cHHHHHHHHHHHHhCCceEEEEEeCCHHHHHHHHHHHHhc--CCcEEE---eCCHHHHHhcCCEEEEec
Confidence            468999999 988877776555444578999999987  34455555541  233443   357889999999999863

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.03  E-value=0.52  Score=43.30  Aligned_cols=33  Identities=18%  Similarity=0.291  Sum_probs=27.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV   54 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~   54 (369)
                      ..+|.|+||+|++|++++..|++.+.  ++++...
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~--~v~~~~~   38 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGS--LVVVNAK   38 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeC
Confidence            45899999999999999999998887  6666543

>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase

Probab=95.02  E-value=0.096  Score=54.86  Aligned_cols=92  Identities=22%  Similarity=0.329  Sum_probs=59.5

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP   99 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p   99 (369)
                      .++|+|||- |.||+.++..+..-+.  +|+.||.......+.++       .+..   ..++++.+++||+|++..  |
T Consensus       138 gktvgIiG~-G~IG~~vA~~l~~fG~--~V~~~d~~~~~~~~~~~-------g~~~---~~~l~ell~~aDvV~l~l--P  202 (525)
T TIGR01327       138 GKTLGVIGL-GRIGSIVAKRAKAFGM--KVLAYDPYISPERAEQL-------GVEL---VDDLDELLARADFITVHT--P  202 (525)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC--EEEEECCCCChhHHHhc-------CCEE---cCCHHHHHhhCCEEEEcc--C
Confidence            479999999 9999999999987676  99999975322222211       1121   235789999999999984  3


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551          100 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus       100 ~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ..+.         +-.++-  .+.+....|.+++|+++
T Consensus       203 lt~~---------T~~li~--~~~l~~mk~ga~lIN~a  229 (525)
T TIGR01327       203 LTPE---------TRGLIG--AEELAKMKKGVIIVNCA  229 (525)
T ss_pred             CChh---------hccCcC--HHHHhcCCCCeEEEEcC
Confidence            2211         111111  13344445788888886

This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=95.01  E-value=0.058  Score=53.48  Aligned_cols=73  Identities=23%  Similarity=0.388  Sum_probs=46.3

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCC-CCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~-~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      .+++||+|+||+|.+|..+...|..++ ...+|.++......|...+..    ...+..-  ..+ .+++.++|+||.+.
T Consensus         5 ~~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~~----~~~~~v~--~~~-~~~~~~~D~vf~a~   77 (344)
T PLN02383          5 ENGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTFE----GRDYTVE--ELT-EDSFDGVDIALFSA   77 (344)
T ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeeec----CceeEEE--eCC-HHHHcCCCEEEECC
Confidence            346799999999999999998888743 345777665543222222221    1223321  123 25678999999986


Q ss_pred             C
Q 017551           97 G   97 (369)
Q Consensus        97 g   97 (369)
                      +
T Consensus        78 p   78 (344)
T PLN02383         78 G   78 (344)
T ss_pred             C
Confidence            4

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.01  E-value=0.068  Score=51.50  Aligned_cols=58  Identities=17%  Similarity=0.321  Sum_probs=46.6

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      -..++|+|||.||.||.+++..|...+.  .|.++...                       +.++++.+++||+||.+.|
T Consensus       156 l~Gk~v~vIG~S~ivG~Pla~lL~~~ga--tVtv~~s~-----------------------t~~l~~~~~~ADIVI~avg  210 (284)
T PRK14179        156 LEGKHAVVIGRSNIVGKPMAQLLLDKNA--TVTLTHSR-----------------------TRNLAEVARKADILVVAIG  210 (284)
T ss_pred             CCCCEEEEECCCCcCcHHHHHHHHHCCC--EEEEECCC-----------------------CCCHHHHHhhCCEEEEecC
Confidence            3457999999999999999999998886  77766211                       2356788999999999988


Q ss_pred             CCC
Q 017551           98 VPR  100 (369)
Q Consensus        98 ~p~  100 (369)
                      .|.
T Consensus       211 ~~~  213 (284)
T PRK14179        211 RGH  213 (284)
T ss_pred             ccc
Confidence            763

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=95.00  E-value=0.12  Score=51.75  Aligned_cols=71  Identities=18%  Similarity=0.194  Sum_probs=44.5

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCC-C-CcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINP-L-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~-~-~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      +||+|+||+|.+|+.+..+++.++ + +.+++++......+...++..    ....... ..+. +.++++|+|+.++|
T Consensus         2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg~~~~~f~g----~~~~v~~-~~~~-~~~~~~Divf~a~~   74 (369)
T PRK06598          2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAGGAAPSFGG----KEGTLQD-AFDI-DALKKLDIIITCQG   74 (369)
T ss_pred             eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhCCcccccCC----CcceEEe-cCCh-hHhcCCCEEEECCC
Confidence            699999999999999997555554 3 567888776432222222222    1122221 1222 46789999999864

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=94.97  E-value=0.15  Score=51.15  Aligned_cols=34  Identities=29%  Similarity=0.557  Sum_probs=30.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV   55 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~   55 (369)
                      ..||+|+|+ |.+|+.++..|+..|. .+|.|+|.+
T Consensus       135 ~~~VlvvG~-GG~Gs~ia~~La~~Gv-g~i~lvD~d  168 (376)
T PRK08762        135 EARVLLIGA-GGLGSPAALYLAAAGV-GTLGIVDHD  168 (376)
T ss_pred             cCcEEEECC-CHHHHHHHHHHHHcCC-CeEEEEeCC
Confidence            459999999 9999999999999885 589999988

>PRK06953 short chain dehydrogenase; Provisional

Probab=94.95  E-value=0.11  Score=47.25  Aligned_cols=112  Identities=17%  Similarity=0.157  Sum_probs=63.2

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEE-eCCCChhh---hcC--CCcEEEE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQLEN---ALT--GMDLVII   94 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~-~~t~dl~~---al~--~ADiVii   94 (369)
                      +++.|+||+|++|+.++..|+..+.  +|+++|.+....  .++..... ..+... +...++++   .+.  ..|+||.
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~--~v~~~~r~~~~~--~~~~~~~~-~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~   76 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGW--RVIATARDAAAL--AALQALGA-EALALDVADPASVAGLAWKLDGEALDAAVY   76 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCC--EEEEEECCHHHH--HHHHhccc-eEEEecCCCHHHHHHHHHHhcCCCCCEEEE
Confidence            4789999999999999999988886  899999875211  12222110 111111 11112222   133  4799999


Q ss_pred             cCCCCC--C-C--CCCH---HHHHHHHHHHHHHHHHHHhhhC--CCeEEEEec
Q 017551           95 PAGVPR--K-P--GMTR---DDLFNINAGIVRTLCEGIAKCC--PNATVNLIS  137 (369)
Q Consensus        95 ~ag~p~--k-~--g~~r---~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~t  137 (369)
                      ++|...  . +  ..+.   ...+..|..-...+.+.+..+-  ..+.+++++
T Consensus        77 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~is  129 (222)
T PRK06953         77 VAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLS  129 (222)
T ss_pred             CCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEc
Confidence            988742  1 1  1122   3345667666666665555432  134455554

>PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional

Probab=94.93  E-value=0.18  Score=51.71  Aligned_cols=124  Identities=19%  Similarity=0.227  Sum_probs=73.4

Q ss_pred             CCCEEEEEcCCCccHHH-HHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           19 AGFKVAILGAAGGIGQP-LAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~-la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      +.+||.|+|. |..|.+ ++..|...|.  +|...|.+... ...+|...    .+..+.+. + .+.+.++|+||.+.|
T Consensus         6 ~~~~v~viG~-G~sG~s~~a~~L~~~G~--~V~~~D~~~~~-~~~~l~~~----gi~~~~~~-~-~~~~~~~d~vv~spg   75 (461)
T PRK00421          6 RIKRIHFVGI-GGIGMSGLAEVLLNLGY--KVSGSDLKESA-VTQRLLEL----GAIIFIGH-D-AENIKDADVVVYSSA   75 (461)
T ss_pred             CCCEEEEEEE-chhhHHHHHHHHHhCCC--eEEEECCCCCh-HHHHHHHC----CCEEeCCC-C-HHHCCCCCEEEECCC
Confidence            3468999999 999999 7889999998  99999987632 12234332    22332222 2 356789999999999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec--CCCCChhHHHHHHHHHh
Q 017551           98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS--NPVNSTVPIAAEVFKKA  154 (369)
Q Consensus        98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t--NPv~~~t~i~ae~~~~~  154 (369)
                      +|...-. ......++++++.+.-- +.+.+++..+|-+|  |==.++|.+++++|+..
T Consensus        76 i~~~~~~-~~~a~~~~i~i~~~~e~-~~~~~~~~~~I~ITGTnGKTTTt~ll~~iL~~~  132 (461)
T PRK00421         76 IPDDNPE-LVAARELGIPVVRRAEM-LAELMRFRTSIAVAGTHGKTTTTSLLAHVLAEA  132 (461)
T ss_pred             CCCCCHH-HHHHHHCCCcEEeHHHH-HHHHHccCcEEEEECCCCHHHHHHHHHHHHHhc
Confidence            8853211 11222445565544222 12222222344454  43345667777777654

>PRK06823 ornithine cyclodeaminase; Validated

Probab=94.93  E-value=0.12  Score=50.67  Aligned_cols=71  Identities=14%  Similarity=0.129  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP   95 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~   95 (369)
                      ....++|+|+ |..+...+..+..-..+.+|.+||.+..  ...+..+.+.  ...+..   .++.++++++||+|+.+
T Consensus       127 d~~~l~iiG~-G~qA~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~--~~~v~~---~~~~~~av~~ADIV~ta  199 (315)
T PRK06823        127 HVSAIGIVGT-GIQARMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQAL--GFAVNT---TLDAAEVAHAANLIVTT  199 (315)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhc--CCcEEE---ECCHHHHhcCCCEEEEe
Confidence            3569999999 9888888777766656789999999873  3333333332  233443   24678999999999986

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=94.91  E-value=0.079  Score=53.83  Aligned_cols=71  Identities=23%  Similarity=0.190  Sum_probs=45.7

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEE-eCCCChhhh-cCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQLENA-LTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~-~~t~dl~~a-l~~ADiVii~a   96 (369)
                      |||.|+|+ |.+|+.++..|...+.  +++++|.+.....  .+.+.....-+.+. +....++++ ++++|.||++.
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~--~v~vid~~~~~~~--~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~   73 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENN--DVTVIDTDEERLR--RLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVT   73 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC--cEEEEECCHHHHH--HHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEec
Confidence            68999999 9999999999998887  8999998763211  12210000111111 011234455 78999999984

>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial

Probab=94.91  E-value=0.12  Score=51.65  Aligned_cols=71  Identities=15%  Similarity=0.222  Sum_probs=46.3

Q ss_pred             CEEEEEcCCCccHHHHHHHHH-hCCC-CcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMK-INPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~-~~~~-~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      +||+|+||+|.||+.+...|. +..+ +.+++++......|........  ...+..   .++ .+++++.|+|+.++|
T Consensus         1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~~~~f~~~--~~~v~~---~~~-~~~~~~vDivffa~g   73 (366)
T TIGR01745         1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQAAPSFGGT--TGTLQD---AFD-IDALKALDIIITCQG   73 (366)
T ss_pred             CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCCcCCCCCC--cceEEc---Ccc-cccccCCCEEEEcCC
Confidence            489999999999999999888 4443 4788998876532322212111  112221   222 247899999999875

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=94.91  E-value=0.24  Score=45.06  Aligned_cols=35  Identities=17%  Similarity=0.391  Sum_probs=31.1

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ..||+|+|+ |.+|+.++..|+..|. .+|+++|.+.
T Consensus        21 ~s~VlIiG~-gglG~evak~La~~GV-g~i~lvD~d~   55 (197)
T cd01492          21 SARILLIGL-KGLGAEIAKNLVLSGI-GSLTILDDRT   55 (197)
T ss_pred             hCcEEEEcC-CHHHHHHHHHHHHcCC-CEEEEEECCc
Confidence            359999999 8899999999999984 6899999874

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=94.91  E-value=0.19  Score=47.65  Aligned_cols=75  Identities=19%  Similarity=0.212  Sum_probs=45.5

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP   95 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~   95 (369)
                      ++||+|.||+|.||+.+...+.+.+...=+.-+|.......-.|..+......+.... +.|+.....++|++|=.
T Consensus         2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~~~~g~d~ge~~g~~~~gv~v-~~~~~~~~~~~DV~IDF   76 (266)
T COG0289           2 MIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPGSLSLGSDAGELAGLGLLGVPV-TDDLLLVKADADVLIDF   76 (266)
T ss_pred             CceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCCccccccchhhhccccccCcee-ecchhhcccCCCEEEEC
Confidence            5799999999999999999999888444445566654111112222221111111111 24456778899988863

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=94.91  E-value=0.11  Score=52.87  Aligned_cols=105  Identities=19%  Similarity=0.284  Sum_probs=65.2

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP   95 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~   95 (369)
                      .+..+|+|+|+ |.+|..++..|...+ ..+|+++|.+...  ..+.++.     ..+..   ..++.+++.++|+||.+
T Consensus       180 ~~~~~vlViGa-G~iG~~~a~~L~~~G-~~~V~v~~r~~~ra~~la~~~g-----~~~~~---~~~~~~~l~~aDvVI~a  249 (423)
T PRK00045        180 LSGKKVLVIGA-GEMGELVAKHLAEKG-VRKITVANRTLERAEELAEEFG-----GEAIP---LDELPEALAEADIVISS  249 (423)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHCC-CCeEEEEeCCHHHHHHHHHHcC-----CcEee---HHHHHHHhccCCEEEEC
Confidence            34579999999 999999998888766 3589999987522  2222221     11111   24566788999999998


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-hhCCCeEEEEecCCCCChh
Q 017551           96 AGVPRKPGMTRDDLFNINAGIVRTLCEGIA-KCCPNATVNLISNPVNSTV  144 (369)
Q Consensus        96 ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~-~~~p~a~viv~tNPv~~~t  144 (369)
                      .|.|..- .+.        ..++.   .+. +.....+++-+++|-|+=.
T Consensus       250 T~s~~~~-i~~--------~~l~~---~~~~~~~~~~vviDla~Prdid~  287 (423)
T PRK00045        250 TGAPHPI-IGK--------GMVER---ALKARRHRPLLLVDLAVPRDIEP  287 (423)
T ss_pred             CCCCCcE-EcH--------HHHHH---HHhhccCCCeEEEEeCCCCCCcc
Confidence            6654310 111        11111   111 1134578889999988753

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.88  E-value=0.086  Score=50.86  Aligned_cols=57  Identities=25%  Similarity=0.435  Sum_probs=45.2

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      +.++|+|||.|..||.+++.+|..++-  .|.++..                       .|.|+++.++.||+||.++|.
T Consensus       154 ~Gk~vvViGrS~iVGkPla~lL~~~~a--TVtichs-----------------------~T~~l~~~~~~ADIvIsAvGk  208 (287)
T PRK14173        154 AGKEVVVVGRSNIVGKPLAALLLREDA--TVTLAHS-----------------------KTQDLPAVTRRADVLVVAVGR  208 (287)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCC--EEEEeCC-----------------------CCCCHHHHHhhCCEEEEecCC
Confidence            457999999999999999999987764  5554331                       245778889999999999987


Q ss_pred             CC
Q 017551           99 PR  100 (369)
Q Consensus        99 p~  100 (369)
                      |.
T Consensus       209 p~  210 (287)
T PRK14173        209 PH  210 (287)
T ss_pred             cC
Confidence            73

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=94.87  E-value=0.074  Score=53.45  Aligned_cols=76  Identities=13%  Similarity=0.171  Sum_probs=46.0

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhccc-CCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD-TGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~-~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      .+++||+|+||+|.+|..+..+|..++. .+|.++..+...|....-.+.. ....+..+. ..+ .+.++++|+|+.+.
T Consensus        36 ~~~~kVaIvGATG~vG~eLlrlL~~hP~-~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~-~~~-~~~~~~~DvVf~Al  112 (381)
T PLN02968         36 EEKKRIFVLGASGYTGAEVRRLLANHPD-FEITVMTADRKAGQSFGSVFPHLITQDLPNLV-AVK-DADFSDVDAVFCCL  112 (381)
T ss_pred             ccccEEEEECCCChHHHHHHHHHHhCCC-CeEEEEEChhhcCCCchhhCccccCcccccee-cCC-HHHhcCCCEEEEcC
Confidence            3457999999999999999999988863 3888887654323221111100 001111111 112 23479999999974

>TIGR03736 PRTRC_ThiF PRTRC system ThiF family protein

Probab=94.87  E-value=0.27  Score=46.42  Aligned_cols=38  Identities=21%  Similarity=0.269  Sum_probs=31.3

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCC---------CcEEEEEeCCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPL---------VSVLHLYDVVN   56 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~---------~~el~L~D~~~   56 (369)
                      +++.||.|||+ |.+|+.++..|+..+.         ..+|+|+|-|.
T Consensus         9 ~~~~~V~vvG~-GGlGs~v~~~Lar~G~a~~~~G~~~g~~i~lvD~D~   55 (244)
T TIGR03736         9 SRPVSVVLVGA-GGTGSQVIAGLARLHHALKALGHPGGLAVTVYDDDT   55 (244)
T ss_pred             hCCCeEEEEcC-ChHHHHHHHHHHHccccccccCCCCCCEEEEECCCE
Confidence            45679999999 9999999999987642         12999999875

A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. This family is the PRTRC system ThiF family protein.

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=94.84  E-value=0.16  Score=50.80  Aligned_cols=35  Identities=26%  Similarity=0.447  Sum_probs=31.1

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ..||+|+|+ |.+|+.++..|+..|. .+|+|+|-+.
T Consensus        41 ~~~VliiG~-GglG~~v~~~La~~Gv-g~i~ivD~D~   75 (370)
T PRK05600         41 NARVLVIGA-GGLGCPAMQSLASAGV-GTITLIDDDT   75 (370)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCC-CEEEEEeCCE
Confidence            459999999 9999999999998884 5999999884

>PRK12744 short chain dehydrogenase; Provisional

Probab=94.83  E-value=0.59  Score=43.37  Aligned_cols=103  Identities=19%  Similarity=0.227  Sum_probs=57.3

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC------chhHHHHhhcccCCCeEEEEe-CCCC---hhhh----
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN------TPGVTADISHMDTGAVVRGFL-GQPQ---LENA----   85 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~------~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a----   85 (369)
                      .+++.|+||+|++|..++..|+..+.  ++++++.+.      ......++.+.  ..++..+. .-+|   .++.    
T Consensus         8 ~k~vlItGa~~gIG~~~a~~l~~~G~--~vv~i~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~   83 (257)
T PRK12744          8 GKVVLIAGGAKNLGGLIARDLAAQGA--KAVAIHYNSAASKADAEETVAAVKAA--GAKAVAFQADLTTAAAVEKLFDDA   83 (257)
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCC--cEEEEecCCccchHHHHHHHHHHHHh--CCcEEEEecCcCCHHHHHHHHHHH
Confidence            46899999999999999999998887  766665432      11122223221  12232221 1122   2222    


Q ss_pred             ---cCCCcEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHhh
Q 017551           86 ---LTGMDLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEGIAK  126 (369)
Q Consensus        86 ---l~~ADiVii~ag~p~k-~--g~~---r~~~~~~N~~i~~~i~~~i~~  126 (369)
                         +...|++|..+|.... +  ..+   ....+..|+.....+.+.+..
T Consensus        84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~  133 (257)
T PRK12744         84 KAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGR  133 (257)
T ss_pred             HHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHH
Confidence               2468999999986432 1  122   233455675554445555443

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=94.83  E-value=0.08  Score=52.18  Aligned_cols=69  Identities=19%  Similarity=0.349  Sum_probs=44.8

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCC-CCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~-~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      +||+|+||+|++|+.+..+|...+ ...+|..+-.+...+...++..    ..+.... . + ..+++++|+||.+.
T Consensus         2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g----~~i~v~d-~-~-~~~~~~vDvVf~A~   71 (334)
T PRK14874          2 YNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKG----KELKVED-L-T-TFDFSGVDIALFSA   71 (334)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCC----ceeEEee-C-C-HHHHcCCCEEEECC
Confidence            699999999999999999998864 2347777755442232222221    2333321 1 2 24568999999985

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.82  E-value=0.083  Score=50.92  Aligned_cols=58  Identities=19%  Similarity=0.395  Sum_probs=46.4

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      -+.++|+|||.|..||.+++.+|...+.  .+.+++.                       .|.++.+.++.||+||.+.|
T Consensus       156 l~Gk~vvViGrS~iVG~Pla~lL~~~~a--tVt~chs-----------------------~t~~l~~~~~~ADIvI~AvG  210 (284)
T PRK14190        156 ISGKHVVVVGRSNIVGKPVGQLLLNENA--TVTYCHS-----------------------KTKNLAELTKQADILIVAVG  210 (284)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCCC--EEEEEeC-----------------------CchhHHHHHHhCCEEEEecC
Confidence            3567999999999999999999988764  5555532                       14567888999999999988


Q ss_pred             CCC
Q 017551           98 VPR  100 (369)
Q Consensus        98 ~p~  100 (369)
                      .|.
T Consensus       211 ~p~  213 (284)
T PRK14190        211 KPK  213 (284)
T ss_pred             CCC
Confidence            774

>PLN02503 fatty acyl-CoA reductase 2

Probab=94.81  E-value=0.4  Score=51.06  Aligned_cols=108  Identities=18%  Similarity=0.142  Sum_probs=68.6

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhC-CCCcEEEEEeCCC--c---hhHHHHhhccc----------------CCCeEEEE
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN--T---PGVTADISHMD----------------TGAVVRGF   76 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~-~~~~el~L~D~~~--~---~g~~~dL~~~~----------------~~~~v~~~   76 (369)
                      +.+.|.|+||+|++|..++..|+.. +-+.+|+++....  .   .....++.+..                ...++...
T Consensus       118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v  197 (605)
T PLN02503        118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV  197 (605)
T ss_pred             cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence            4679999999999999999888864 4567888887643  1   11111111100                01234333


Q ss_pred             eCC-C---------ChhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh
Q 017551           77 LGQ-P---------QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC  127 (369)
Q Consensus        77 ~~t-~---------dl~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~  127 (369)
                      .+. +         +++...++.|+||.+|+.-. ...........|+....++.+.+.+.
T Consensus       198 ~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~-f~~~~~~a~~vNV~GT~nLLelA~~~  257 (605)
T PLN02503        198 VGNVCESNLGLEPDLADEIAKEVDVIINSAANTT-FDERYDVAIDINTRGPCHLMSFAKKC  257 (605)
T ss_pred             EeeCCCcccCCCHHHHHHHHhcCCEEEECccccc-cccCHHHHHHHHHHHHHHHHHHHHHc
Confidence            211 1         22333467999999987543 23456667788999999999988765

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.78  E-value=0.1  Score=50.31  Aligned_cols=57  Identities=18%  Similarity=0.452  Sum_probs=45.9

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      +.++|+|||.|..+|.+++.+|...+.  .|.+++..                       |.++++.++.||+||.+.|.
T Consensus       158 ~Gk~vvViGrs~iVG~Pla~lL~~~~a--tVtv~hs~-----------------------T~~l~~~~~~ADIvi~avG~  212 (285)
T PRK10792        158 YGLNAVVVGASNIVGRPMSLELLLAGC--TVTVCHRF-----------------------TKNLRHHVRNADLLVVAVGK  212 (285)
T ss_pred             CCCEEEEECCCcccHHHHHHHHHHCCC--eEEEEECC-----------------------CCCHHHHHhhCCEEEEcCCC
Confidence            457999999977799999999987765  66666432                       35678889999999999987


Q ss_pred             CC
Q 017551           99 PR  100 (369)
Q Consensus        99 p~  100 (369)
                      |.
T Consensus       213 p~  214 (285)
T PRK10792        213 PG  214 (285)
T ss_pred             cc
Confidence            74

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=94.78  E-value=0.38  Score=44.13  Aligned_cols=113  Identities=15%  Similarity=0.134  Sum_probs=61.4

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEe-CCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------c
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYD-VVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENA-------L   86 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D-~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l   86 (369)
                      +.+.|+||+|++|..++..|+..+.  ++++.. .+..  .....++....  .++..+. .-+|   +.++       +
T Consensus         4 k~~lVtG~s~giG~~~a~~l~~~G~--~vv~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (246)
T PRK12938          4 RIAYVTGGMGGIGTSICQRLHKDGF--KVVAGCGPNSPRRVKWLEDQKALG--FDFIASEGNVGDWDSTKAAFDKVKAEV   79 (246)
T ss_pred             CEEEEECCCChHHHHHHHHHHHcCC--EEEEEcCCChHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            4689999999999999999999987  777754 3221  11222232211  2222111 1122   2222       2


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHH----HHHHHHhhhCCCeEEEEecC
Q 017551           87 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVR----TLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~----~i~~~i~~~~p~a~viv~tN  138 (369)
                      ...|+||..+|.....   ..+   ....+..|..-..    .+.+.+.+. ..+.++++|.
T Consensus        80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS  140 (246)
T PRK12938         80 GEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVER-GWGRIINISS  140 (246)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEEec
Confidence            4689999999875421   112   2334566655533    344444332 3345666654

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.78  E-value=0.097  Score=50.29  Aligned_cols=57  Identities=19%  Similarity=0.438  Sum_probs=45.9

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      +.++|+|||.|..||.+++.+|.+++.  .+.+++.                       .|.|+.+..+.||+||.++|.
T Consensus       157 ~Gk~vvViGrS~~VGkPla~lL~~~~A--tVt~chs-----------------------~T~~l~~~~~~ADIvIsAvGk  211 (278)
T PRK14172        157 EGKEVVVIGRSNIVGKPVAQLLLNENA--TVTICHS-----------------------KTKNLKEVCKKADILVVAIGR  211 (278)
T ss_pred             CCCEEEEECCCccchHHHHHHHHHCCC--EEEEeCC-----------------------CCCCHHHHHhhCCEEEEcCCC
Confidence            457999999999999999999987764  5555542                       145677888999999999987


Q ss_pred             CC
Q 017551           99 PR  100 (369)
Q Consensus        99 p~  100 (369)
                      |.
T Consensus       212 p~  213 (278)
T PRK14172        212 PK  213 (278)
T ss_pred             cC
Confidence            74

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=94.77  E-value=0.36  Score=44.28  Aligned_cols=71  Identities=17%  Similarity=0.111  Sum_probs=48.5

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      ..||.|||+ |.+|..-+..|...+.  +|+++|.+... ...++...   .+++...+.-+ .+.+.++|+||.+-+.
T Consensus         9 gk~vlVvGg-G~va~rk~~~Ll~~ga--~VtVvsp~~~~-~l~~l~~~---~~i~~~~~~~~-~~dl~~~~lVi~at~d   79 (205)
T TIGR01470         9 GRAVLVVGG-GDVALRKARLLLKAGA--QLRVIAEELES-ELTLLAEQ---GGITWLARCFD-ADILEGAFLVIAATDD   79 (205)
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHCCC--EEEEEcCCCCH-HHHHHHHc---CCEEEEeCCCC-HHHhCCcEEEEECCCC
Confidence            459999999 9999999999998886  89999986432 22233321   24443322222 3568999999988543

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK07775 short chain dehydrogenase; Provisional

Probab=94.77  E-value=0.8  Score=43.16  Aligned_cols=34  Identities=21%  Similarity=0.198  Sum_probs=30.5

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      +.+.|+||+|++|+.++..|+.+|.  +|++.+.+.
T Consensus        11 ~~vlVtGa~g~iG~~la~~L~~~G~--~V~~~~r~~   44 (274)
T PRK07775         11 RPALVAGASSGIGAATAIELAAAGF--PVALGARRV   44 (274)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence            4899999999999999999999887  888888765

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=94.77  E-value=0.075  Score=52.50  Aligned_cols=71  Identities=20%  Similarity=0.346  Sum_probs=44.9

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCC-CCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~-~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      +++||+|+||+|.+|.-+..+|...+ ...+|+++-..+..|.-..+..    ..+.+.  ..+. ++++++|+|+++.
T Consensus         3 ~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~~~~----~~l~~~--~~~~-~~~~~vD~vFla~   74 (336)
T PRK05671          3 QPLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVPFAG----KNLRVR--EVDS-FDFSQVQLAFFAA   74 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeeccCC----cceEEe--eCCh-HHhcCCCEEEEcC
Confidence            44799999999999999999998643 3457777755442232222222    123322  1222 3478999999975

>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.76  E-value=0.15  Score=52.07  Aligned_cols=124  Identities=19%  Similarity=0.230  Sum_probs=74.1

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhH---HHHhhcccCCCeEEEEeCC-CCh---hhhcCCCcEEEE
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV---TADISHMDTGAVVRGFLGQ-PQL---ENALTGMDLVII   94 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~---~~dL~~~~~~~~v~~~~~t-~dl---~~al~~ADiVii   94 (369)
                      ||.|+|+ |..|.+.+..|...|.  +|.+.|.+.....   ...|...    .++.+.+. .++   ...+.+.|.||.
T Consensus         2 ~v~viG~-G~sG~s~a~~l~~~G~--~V~~~D~~~~~~~~~~~~~l~~~----gi~~~~g~~~~~~~~~~~~~~~d~vv~   74 (459)
T PRK02705          2 IAHVIGL-GRSGIAAARLLKAQGW--EVVVSDRNDSPELLERQQELEQE----GITVKLGKPLELESFQPWLDQPDLVVV   74 (459)
T ss_pred             eEEEEcc-CHHHHHHHHHHHHCCC--EEEEECCCCchhhHHHHHHHHHc----CCEEEECCccchhhhhHHhhcCCEEEE
Confidence            7999999 9999999999999998  9999998762211   1123332    22332222 111   135788999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe--cCCCCChhHHHHHHHHHh
Q 017551           95 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI--SNPVNSTVPIAAEVFKKA  154 (369)
Q Consensus        95 ~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~--tNPv~~~t~i~ae~~~~~  154 (369)
                      +.|+|...- ........+++++.++....+... +..+|-+  ||==.+++.+++.++...
T Consensus        75 s~gi~~~~~-~~~~a~~~~i~v~~~~~~~~~~~~-~~~~I~VTGT~GKTTTt~ml~~iL~~~  134 (459)
T PRK02705         75 SPGIPWDHP-TLVELRERGIEVIGEIELAWRALK-HIPWVGITGTNGKTTVTALLAHILQAA  134 (459)
T ss_pred             CCCCCCCCH-HHHHHHHcCCcEEEhHHHHHHhhc-CCCEEEEeCCCchHHHHHHHHHHHHHc
Confidence            988874321 111222456677766654433322 2234444  444446677777777664

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=94.76  E-value=0.18  Score=49.66  Aligned_cols=93  Identities=27%  Similarity=0.367  Sum_probs=60.0

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      .+.+++.|+|. |.||+.++..++  +...+|+.||......... ..      ..+.    .++++.++.||+|++.+ 
T Consensus       144 l~gktvGIiG~-GrIG~avA~r~~--~Fgm~v~y~~~~~~~~~~~-~~------~~~y----~~l~ell~~sDii~l~~-  208 (324)
T COG1052         144 LRGKTLGIIGL-GRIGQAVARRLK--GFGMKVLYYDRSPNPEAEK-EL------GARY----VDLDELLAESDIISLHC-  208 (324)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHh--cCCCEEEEECCCCChHHHh-hc------Ccee----ccHHHHHHhCCEEEEeC-
Confidence            44689999999 999999999999  5555999999875311111 11      1121    23788999999999985 


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                       |..+. +|        .++..  +.+++.-|.+++||.+
T Consensus       209 -Plt~~-T~--------hLin~--~~l~~mk~ga~lVNta  236 (324)
T COG1052         209 -PLTPE-TR--------HLINA--EELAKMKPGAILVNTA  236 (324)
T ss_pred             -CCChH-Hh--------hhcCH--HHHHhCCCCeEEEECC
Confidence             32111 11        11111  3444455888888875

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.75  E-value=0.097  Score=50.50  Aligned_cols=57  Identities=19%  Similarity=0.381  Sum_probs=45.9

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      +.++|+|||.|..+|.+++.+|...+.  .|.+++.                       .|.|+.+.++.||+||.++|.
T Consensus       163 ~Gk~vvViGrs~iVGkPla~lL~~~~a--tVtv~hs-----------------------~T~~l~~~~~~ADIvv~AvG~  217 (287)
T PRK14176        163 EGKNAVIVGHSNVVGKPMAAMLLNRNA--TVSVCHV-----------------------FTDDLKKYTLDADILVVATGV  217 (287)
T ss_pred             CCCEEEEECCCcccHHHHHHHHHHCCC--EEEEEec-----------------------cCCCHHHHHhhCCEEEEccCC
Confidence            467999999977799999999988775  6665552                       145677889999999999998


Q ss_pred             CC
Q 017551           99 PR  100 (369)
Q Consensus        99 p~  100 (369)
                      |.
T Consensus       218 p~  219 (287)
T PRK14176        218 KH  219 (287)
T ss_pred             cc
Confidence            84

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.75  E-value=0.094  Score=50.52  Aligned_cols=58  Identities=21%  Similarity=0.395  Sum_probs=46.2

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      -..++|+|||.|..||.+++.+|.+++.  .+..++.                       .|.|+++.++.||+||.++|
T Consensus       157 l~Gk~vvViGrS~iVGkPla~lL~~~~a--tVt~chs-----------------------~T~~l~~~~~~ADIvIsAvG  211 (284)
T PRK14177        157 VTGKNAVVVGRSPILGKPMAMLLTEMNA--TVTLCHS-----------------------KTQNLPSIVRQADIIVGAVG  211 (284)
T ss_pred             CCCCEEEEECCCCcchHHHHHHHHHCCC--EEEEeCC-----------------------CCCCHHHHHhhCCEEEEeCC
Confidence            3457999999999999999999988764  5555442                       24577888999999999988


Q ss_pred             CCC
Q 017551           98 VPR  100 (369)
Q Consensus        98 ~p~  100 (369)
                      .|.
T Consensus       212 k~~  214 (284)
T PRK14177        212 KPE  214 (284)
T ss_pred             CcC
Confidence            774

>PLN00203 glutamyl-tRNA reductase

Probab=94.70  E-value=0.23  Score=51.94  Aligned_cols=106  Identities=13%  Similarity=0.112  Sum_probs=63.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP   99 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p   99 (369)
                      ..+|+|||+ |.+|..++..|...|. .+|++++.+.....  .+........+... ..+++.+++.+||+||.+-+.+
T Consensus       266 ~kkVlVIGA-G~mG~~~a~~L~~~G~-~~V~V~nRs~era~--~La~~~~g~~i~~~-~~~dl~~al~~aDVVIsAT~s~  340 (519)
T PLN00203        266 SARVLVIGA-GKMGKLLVKHLVSKGC-TKMVVVNRSEERVA--ALREEFPDVEIIYK-PLDEMLACAAEADVVFTSTSSE  340 (519)
T ss_pred             CCEEEEEeC-HHHHHHHHHHHHhCCC-CeEEEEeCCHHHHH--HHHHHhCCCceEee-cHhhHHHHHhcCCEEEEccCCC
Confidence            579999999 9999999998887763 57999998752221  12211101122221 1246678899999999875433


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhh----CCCeEEEEecCCCCCh
Q 017551          100 RKPGMTRDDLFNINAGIVRTLCEGIAKC----CPNATVNLISNPVNST  143 (369)
Q Consensus       100 ~k~g~~r~~~~~~N~~i~~~i~~~i~~~----~p~a~viv~tNPv~~~  143 (369)
                      . |=            +..+..+.+...    ...-++|-++.|=|+=
T Consensus       341 ~-pv------------I~~e~l~~~~~~~~~~~~~~~~IDLAvPRdId  375 (519)
T PLN00203        341 T-PL------------FLKEHVEALPPASDTVGGKRLFVDISVPRNVG  375 (519)
T ss_pred             C-Ce------------eCHHHHHHhhhcccccCCCeEEEEeCCCCCCc
Confidence            2 10            112233333211    1224678889998774

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.69  E-value=0.22  Score=51.40  Aligned_cols=125  Identities=14%  Similarity=0.138  Sum_probs=75.3

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      +.+||.|+|+ |..|.+++..|...|.  +|..+|.+...  ..++...   ..+..+.+..+ .+.+.++|+||.+.|+
T Consensus        14 ~~~~v~v~G~-G~sG~a~a~~L~~~G~--~V~~~D~~~~~--~~~~l~~---~gi~~~~~~~~-~~~~~~~d~vV~Spgi   84 (473)
T PRK00141         14 LSGRVLVAGA-GVSGRGIAAMLSELGC--DVVVADDNETA--RHKLIEV---TGVADISTAEA-SDQLDSFSLVVTSPGW   84 (473)
T ss_pred             cCCeEEEEcc-CHHHHHHHHHHHHCCC--EEEEECCChHH--HHHHHHh---cCcEEEeCCCc-hhHhcCCCEEEeCCCC
Confidence            3468999999 9999999999999887  99999975422  1222111   12333332222 3457899999999998


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhh-----hC-CCeEEEEecCCCC--ChhHHHHHHHHHh
Q 017551           99 PRKPGMTRDDLFNINAGIVRTLCEGIAK-----CC-PNATVNLISNPVN--STVPIAAEVFKKA  154 (369)
Q Consensus        99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~-----~~-p~a~viv~tNPv~--~~t~i~ae~~~~~  154 (369)
                      |...-. .......+++++.++.-....     +. |. .+|-+|--.+  +++.+++.+++..
T Consensus        85 ~~~~p~-~~~a~~~gi~v~~~~el~~~~~~~~~~~~~~-~vIaVTGTnGKTTTt~ml~~iL~~~  146 (473)
T PRK00141         85 RPDSPL-LVDAQSQGLEVIGDVELAWRLDQAGVFGEPR-TWLAVTGTNGKTTTTAMLAAMMQEG  146 (473)
T ss_pred             CCCCHH-HHHHHHCCCceeeHHHHHHHhhhhhccCCCC-CEEEEeCCCcHHHHHHHHHHHHHhc
Confidence            853211 222234566666665543221     21 32 3445544444  5667777777654

>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.69  E-value=0.1  Score=50.55  Aligned_cols=58  Identities=17%  Similarity=0.380  Sum_probs=45.9

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      -+.++|+|||.|..||.+++.+|.+++.  .+.+++.                       .|.|+.+.++.||+||.++|
T Consensus       158 l~Gk~vvViGrS~iVGkPla~lL~~~~a--TVt~chs-----------------------~T~~l~~~~~~ADIvVsAvG  212 (294)
T PRK14187        158 LSGSDAVVIGRSNIVGKPMACLLLGENC--TVTTVHS-----------------------ATRDLADYCSKADILVAAVG  212 (294)
T ss_pred             CCCCEEEEECCCccchHHHHHHHhhCCC--EEEEeCC-----------------------CCCCHHHHHhhCCEEEEccC
Confidence            4457999999999999999999987764  5554442                       14567788999999999998


Q ss_pred             CCC
Q 017551           98 VPR  100 (369)
Q Consensus        98 ~p~  100 (369)
                      .|.
T Consensus       213 kp~  215 (294)
T PRK14187        213 IPN  215 (294)
T ss_pred             CcC
Confidence            774

>PRK06046 alanine dehydrogenase; Validated

Probab=94.68  E-value=0.13  Score=50.46  Aligned_cols=71  Identities=18%  Similarity=0.264  Sum_probs=50.4

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      ..+|+|||+ |.+|...+..+...+.+.++.++|++.  ....+.++.+. ....+..   .++++++++ +|+|+++-
T Consensus       129 ~~~vgiiG~-G~qa~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~-~~~~v~~---~~~~~~~l~-aDiVv~aT  201 (326)
T PRK06046        129 SKVVGIIGA-GNQARTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSV-VGCDVTV---AEDIEEACD-CDILVTTT  201 (326)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhh-cCceEEE---eCCHHHHhh-CCEEEEec
Confidence            469999999 999998888777666788999999987  33334444332 1223443   246778886 99999863

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.67  E-value=0.11  Score=50.10  Aligned_cols=58  Identities=21%  Similarity=0.368  Sum_probs=45.4

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      -+.++|+|||.|..||.+++.+|..++.  .|.+++.                       .|.|+.+-++.||+||.++|
T Consensus       156 l~Gk~vvViGrS~~VGkPla~lL~~~~A--TVt~chs-----------------------~T~dl~~~~k~ADIvIsAvG  210 (282)
T PRK14180        156 TEGAYAVVVGASNVVGKPVSQLLLNAKA--TVTTCHR-----------------------FTTDLKSHTTKADILIVAVG  210 (282)
T ss_pred             CCCCEEEEECCCCcchHHHHHHHHHCCC--EEEEEcC-----------------------CCCCHHHHhhhcCEEEEccC
Confidence            3467999999999999999999987764  5544432                       14567778999999999998


Q ss_pred             CCC
Q 017551           98 VPR  100 (369)
Q Consensus        98 ~p~  100 (369)
                      .|.
T Consensus       211 kp~  213 (282)
T PRK14180        211 KPN  213 (282)
T ss_pred             CcC
Confidence            774

>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=94.66  E-value=0.12  Score=54.04  Aligned_cols=93  Identities=25%  Similarity=0.364  Sum_probs=59.6

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      ..++|+|+|. |.||+.++..++.-+.  +|+.||.........++       .+..   . ++++.++.||+|++..  
T Consensus       139 ~gktvgIiG~-G~IG~~vA~~l~~fG~--~V~~~d~~~~~~~~~~~-------g~~~---~-~l~ell~~aDiV~l~l--  202 (526)
T PRK13581        139 YGKTLGIIGL-GRIGSEVAKRAKAFGM--KVIAYDPYISPERAAQL-------GVEL---V-SLDELLARADFITLHT--  202 (526)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEECCCCChhHHHhc-------CCEE---E-cHHHHHhhCCEEEEcc--
Confidence            3579999999 9999999999987776  99999985422221111       1122   1 4788999999999984  


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 017551           99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      |..+.         +-.++.  .+.+...-|.+++|+++-
T Consensus       203 P~t~~---------t~~li~--~~~l~~mk~ga~lIN~aR  231 (526)
T PRK13581        203 PLTPE---------TRGLIG--AEELAKMKPGVRIINCAR  231 (526)
T ss_pred             CCChH---------hhcCcC--HHHHhcCCCCeEEEECCC
Confidence            22111         111111  123333347888888863

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=94.66  E-value=0.2  Score=45.76  Aligned_cols=114  Identities=14%  Similarity=0.164  Sum_probs=63.1

Q ss_pred             EEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHhhcccCCCeEEEEe-CCCCh---hhh-------cCC
Q 017551           23 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQL---ENA-------LTG   88 (369)
Q Consensus        23 I~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~---~~g~~~dL~~~~~~~~v~~~~-~t~dl---~~a-------l~~   88 (369)
                      |.|+||+|++|..++..|++++.  ++++++...   ......++.+..  .++..+. .-+|.   .++       +..
T Consensus         1 vlItGas~giG~~~a~~l~~~G~--~v~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGF--EICVHYHSGRSDAESVVSAIQAQG--GNARLLQFDVADRVACRTLLEADIAEHGA   76 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHHcC--CeEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            57999999999999999999987  888887643   122223333221  2333221 11222   122       234


Q ss_pred             CcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHH----hhhCCCeEEEEecCCC
Q 017551           89 MDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGI----AKCCPNATVNLISNPV  140 (369)
Q Consensus        89 ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tNPv  140 (369)
                      .|.+|..+|.....   ..+   ....+..|......+.+.+    .+..+.+.++++|...
T Consensus        77 i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~  138 (239)
T TIGR01831        77 YYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVS  138 (239)
T ss_pred             CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchh
Confidence            68899988864322   122   2344566665544444432    2223456666666543

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.65  E-value=0.11  Score=50.07  Aligned_cols=58  Identities=28%  Similarity=0.472  Sum_probs=45.4

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      -+.++|+|||.|..||.+++.+|..++.  .+.++..                       .|.|+++.++.||+||.+.|
T Consensus       154 l~Gk~vvViGrS~iVGkPla~lL~~~~a--tVtichs-----------------------~T~~l~~~~~~ADIvI~AvG  208 (282)
T PRK14169        154 VAGKRVVIVGRSNIVGRPLAGLMVNHDA--TVTIAHS-----------------------KTRNLKQLTKEADILVVAVG  208 (282)
T ss_pred             CCCCEEEEECCCccchHHHHHHHHHCCC--EEEEECC-----------------------CCCCHHHHHhhCCEEEEccC
Confidence            3457999999999999999999987764  4443321                       24577888999999999998


Q ss_pred             CCC
Q 017551           98 VPR  100 (369)
Q Consensus        98 ~p~  100 (369)
                      .|.
T Consensus       209 ~p~  211 (282)
T PRK14169        209 VPH  211 (282)
T ss_pred             CcC
Confidence            774

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=94.63  E-value=0.074  Score=52.30  Aligned_cols=73  Identities=26%  Similarity=0.220  Sum_probs=47.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccC--CCeEEEEeCCCChhh-hcCCCcEEEEc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT--GAVVRGFLGQPQLEN-ALTGMDLVIIP   95 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~--~~~v~~~~~t~dl~~-al~~ADiVii~   95 (369)
                      ++||+|+||+|+.|--+..+|..++.+ |+.++...+..|....-.|-..  ...++..  +-|.++ ...+||+||++
T Consensus         2 ~~kV~IvGasGYtG~EL~rlL~~Hp~v-e~~~~ss~~~~g~~~~~~~p~l~g~~~l~~~--~~~~~~~~~~~~DvvFla   77 (349)
T COG0002           2 MIKVGIVGASGYTGLELLRLLAGHPDV-ELILISSRERAGKPVSDVHPNLRGLVDLPFQ--TIDPEKIELDECDVVFLA   77 (349)
T ss_pred             CceEEEEcCCCCcHHHHHHHHhcCCCe-EEEEeechhhcCCchHHhCcccccccccccc--cCChhhhhcccCCEEEEe
Confidence            579999999999999999999999865 5888887664444332222211  1223332  122222 35669999997

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=94.60  E-value=0.099  Score=50.28  Aligned_cols=73  Identities=12%  Similarity=0.185  Sum_probs=47.8

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      +..++.|+|| |.+|..++..|+..+. .+|.+++++..+  ..+.++...   ..+.......++.+.+.++|+||.+-
T Consensus       124 ~~k~vlvlGa-GGaarai~~aL~~~G~-~~i~I~nRt~~ka~~La~~~~~~---~~~~~~~~~~~~~~~~~~~DiVInaT  198 (282)
T TIGR01809       124 AGFRGLVIGA-GGTSRAAVYALASLGV-TDITVINRNPDKLSRLVDLGVQV---GVITRLEGDSGGLAIEKAAEVLVSTV  198 (282)
T ss_pred             CCceEEEEcC-cHHHHHHHHHHHHcCC-CeEEEEeCCHHHHHHHHHHhhhc---CcceeccchhhhhhcccCCCEEEECC
Confidence            4568999999 9999999999998773 589999987532  233333211   12222111123445678999999974

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=94.59  E-value=0.28  Score=40.66  Aligned_cols=72  Identities=29%  Similarity=0.381  Sum_probs=39.7

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccC-CCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~-~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      ||+|+|++|.+|..++..+...+.+.-..+++.+...+......+... ...+..+. ..+++  ..++|+|+++.
T Consensus         1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~DvV~~~~   73 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPHLKGEVVLELE-PEDFE--ELAVDIVFLAL   73 (122)
T ss_pred             CEEEECCCChHHHHHHHHHhcCCCceEEEEEechhhcCcCHHHHCcccccccccccc-cCChh--hcCCCEEEEcC
Confidence            689999879999999988888654433344465432222221122110 00011111 13332  35999999974

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=94.59  E-value=0.38  Score=46.04  Aligned_cols=35  Identities=20%  Similarity=0.405  Sum_probs=31.1

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ..+|+|+|+ |.+|+.++..|+..|. .+|.|+|-+.
T Consensus        30 ~s~VlVvG~-GGVGs~vae~Lar~GV-g~itLiD~D~   64 (268)
T PRK15116         30 DAHICVVGI-GGVGSWAAEALARTGI-GAITLIDMDD   64 (268)
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHcCC-CEEEEEeCCE
Confidence            459999999 9999999999999884 5899999874

>PRK05599 hypothetical protein; Provisional

Probab=94.58  E-value=0.8  Score=42.45  Aligned_cols=116  Identities=13%  Similarity=0.213  Sum_probs=64.1

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---h-------hhhcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---L-------ENALT   87 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l-------~~al~   87 (369)
                      |.+.|+||++++|..++..|. ++.  .|++.+.+.  +...+.++.... ...+..+. .-+|   .       .+.+.
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~--~Vil~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   76 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGE--DVVLAARRPEAAQGLASDLRQRG-ATSVHVLSFDAQDLDTHRELVKQTQELAG   76 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCC--EEEEEeCCHHHHHHHHHHHHhcc-CCceEEEEcccCCHHHHHHHHHHHHHhcC
Confidence            358899999999999999988 464  899999876  333344453321 11122111 1112   1       12235


Q ss_pred             CCcEEEEcCCCCCCCC---CCH---HHHHHHH----HHHHHHHHHHHhhhCCCeEEEEecCCC
Q 017551           88 GMDLVIIPAGVPRKPG---MTR---DDLFNIN----AGIVRTLCEGIAKCCPNATVNLISNPV  140 (369)
Q Consensus        88 ~ADiVii~ag~p~k~g---~~r---~~~~~~N----~~i~~~i~~~i~~~~p~a~viv~tNPv  140 (369)
                      .-|++|..+|......   .+.   .+....|    ..+.+.+.+.+.+...++.|+++|.-.
T Consensus        77 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~  139 (246)
T PRK05599         77 EISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIA  139 (246)
T ss_pred             CCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence            6899999988743211   111   1222333    233345556665544456777776543

>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.58  E-value=0.11  Score=50.01  Aligned_cols=58  Identities=16%  Similarity=0.388  Sum_probs=45.7

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      -..++|+|||.|..||.+++.+|.+++.  .+.+++.                       .|.|+++.++.||+||.++|
T Consensus       155 l~Gk~vvVvGrS~iVGkPla~lL~~~~a--tVtichs-----------------------~T~~l~~~~~~ADIvI~AvG  209 (284)
T PRK14170        155 IEGKRAVVIGRSNIVGKPVAQLLLNENA--TVTIAHS-----------------------RTKDLPQVAKEADILVVATG  209 (284)
T ss_pred             CCCCEEEEECCCCcchHHHHHHHHHCCC--EEEEeCC-----------------------CCCCHHHHHhhCCEEEEecC
Confidence            3467999999988999999999987764  5554422                       24567788999999999998


Q ss_pred             CCC
Q 017551           98 VPR  100 (369)
Q Consensus        98 ~p~  100 (369)
                      .|.
T Consensus       210 ~~~  212 (284)
T PRK14170        210 LAK  212 (284)
T ss_pred             CcC
Confidence            774

>TIGR01082 murC UDP-N-acetylmuramate--alanine ligase

Probab=94.58  E-value=0.29  Score=50.01  Aligned_cols=125  Identities=18%  Similarity=0.268  Sum_probs=72.6

Q ss_pred             EEEEEcCCCccHHH-HHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCCC
Q 017551           22 KVAILGAAGGIGQP-LAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  100 (369)
Q Consensus        22 KI~IiGA~G~vGs~-la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p~  100 (369)
                      +|.++|. |..|.. +|..|+..|.  +|..+|.+... ...+|...    .+..+.+ .+ .+.++++|+||.+.|+|.
T Consensus         1 ~~~~iGi-ggsGm~~la~~L~~~G~--~v~~~D~~~~~-~~~~l~~~----gi~~~~g-~~-~~~~~~~d~vV~spgi~~   70 (448)
T TIGR01082         1 KIHFVGI-GGIGMSGIAEILLNRGY--QVSGSDIAENA-TTKRLEAL----GIPIYIG-HS-AENLDDADVVVVSAAIKD   70 (448)
T ss_pred             CEEEEEE-CHHHHHHHHHHHHHCCC--eEEEECCCcch-HHHHHHHC----cCEEeCC-CC-HHHCCCCCEEEECCCCCC
Confidence            5889999 989997 8999999998  99999986532 22234321    2333333 23 356889999999999885


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec--CCCCChhHHHHHHHHHhCCCCC
Q 017551          101 KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS--NPVNSTVPIAAEVFKKAGTYDP  159 (369)
Q Consensus       101 k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t--NPv~~~t~i~ae~~~~~~~~~~  159 (369)
                      ..-. .......+++++.+.-- +.+...+..+|-+|  |==.++|.+++.+++.. |+++
T Consensus        71 ~~p~-~~~a~~~~i~v~~~~el-~~~~~~~~~~IaITGTnGKTTTt~ll~~iL~~~-g~~~  128 (448)
T TIGR01082        71 DNPE-IVEAKERGIPVIRRAEM-LAELMRFRHSIAVAGTHGKTTTTAMIAVILKEA-GLDP  128 (448)
T ss_pred             CCHH-HHHHHHcCCceEeHHHH-HHHHHhcCcEEEEECCCChHHHHHHHHHHHHHc-CCCC
Confidence            3211 11222345555544322 22222122244443  43345666676776554 4543

UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (murein tripeptide ligase) is described by TIGR01081.

>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.57  E-value=0.22  Score=51.10  Aligned_cols=124  Identities=20%  Similarity=0.247  Sum_probs=75.3

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc---hhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~---~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      ..||.|+|. |..|.+++..|...|.  +|.++|.+..   .....+|...    .+..+.+. +..+.+.++|+||.+.
T Consensus        14 ~~~i~v~G~-G~sG~a~a~~L~~~G~--~V~~~D~~~~~~~~~~~~~l~~~----gi~~~~~~-~~~~~~~~~dlVV~Sp   85 (458)
T PRK01710         14 NKKVAVVGI-GVSNIPLIKFLVKLGA--KVTAFDKKSEEELGEVSNELKEL----GVKLVLGE-NYLDKLDGFDVIFKTP   85 (458)
T ss_pred             CCeEEEEcc-cHHHHHHHHHHHHCCC--EEEEECCCCCccchHHHHHHHhC----CCEEEeCC-CChHHhccCCEEEECC
Confidence            359999999 9999999999999998  9999998752   1111223321    23333222 2245678999999998


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC--ChhHHHHHHHHHh
Q 017551           97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN--STVPIAAEVFKKA  154 (369)
Q Consensus        97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~--~~t~i~ae~~~~~  154 (369)
                      |+|...-+ .......+++++.++-. +.+.. +..+|-+|=-.+  +++.+++.+|...
T Consensus        86 gi~~~~p~-~~~a~~~~i~i~s~~e~-~~~~~-~~~vIaITGTnGKTTT~~ll~~iL~~~  142 (458)
T PRK01710         86 SMRIDSPE-LVKAKEEGAYITSEMEE-FIKYC-PAKVFGVTGSDGKTTTTTLIYEMLKEE  142 (458)
T ss_pred             CCCCCchH-HHHHHHcCCcEEechHH-hhhhc-CCCEEEEECCCCHHHHHHHHHHHHHhC
Confidence            88753221 22223566777665532 22332 233555554444  5666776777653

>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.56  E-value=0.12  Score=49.81  Aligned_cols=58  Identities=22%  Similarity=0.373  Sum_probs=45.3

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      -..++|+|||.|..||.+++.+|..++.  .|.+++.                       .|.|+++.++.||+||.++|
T Consensus       155 l~Gk~vvVvGrS~iVGkPla~lL~~~~a--tVt~chs-----------------------~T~nl~~~~~~ADIvIsAvG  209 (282)
T PRK14166        155 LEGKDAVIIGASNIVGRPMATMLLNAGA--TVSVCHI-----------------------KTKDLSLYTRQADLIIVAAG  209 (282)
T ss_pred             CCCCEEEEECCCCcchHHHHHHHHHCCC--EEEEeCC-----------------------CCCCHHHHHhhCCEEEEcCC
Confidence            3467999999999999999999987664  4444332                       14567788999999999998


Q ss_pred             CCC
Q 017551           98 VPR  100 (369)
Q Consensus        98 ~p~  100 (369)
                      .|.
T Consensus       210 kp~  212 (282)
T PRK14166        210 CVN  212 (282)
T ss_pred             CcC
Confidence            774

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=94.51  E-value=0.28  Score=48.84  Aligned_cols=35  Identities=29%  Similarity=0.503  Sum_probs=31.1

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ..||.|+|+ |++|+.++..|+..|. .+|.|+|-+.
T Consensus        28 ~~~VlivG~-GGlGs~~a~~La~~Gv-g~i~lvD~D~   62 (355)
T PRK05597         28 DAKVAVIGA-GGLGSPALLYLAGAGV-GHITIIDDDT   62 (355)
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHcCC-CeEEEEeCCE
Confidence            359999999 9999999999998885 5899999885

>TIGR00936 ahcY adenosylhomocysteinase

Probab=94.51  E-value=0.23  Score=50.31  Aligned_cols=92  Identities=24%  Similarity=0.208  Sum_probs=59.4

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      ....+|+|+|. |.+|..++..++..+.  +|+.+|.+....... ..+   ..  ..    .+++++++++|+||.+.|
T Consensus       193 l~Gk~VvViG~-G~IG~~vA~~ak~~Ga--~ViV~d~dp~r~~~A-~~~---G~--~v----~~leeal~~aDVVItaTG  259 (406)
T TIGR00936       193 IAGKTVVVAGY-GWCGKGIAMRARGMGA--RVIVTEVDPIRALEA-AMD---GF--RV----MTMEEAAKIGDIFITATG  259 (406)
T ss_pred             CCcCEEEEECC-CHHHHHHHHHHhhCcC--EEEEEeCChhhHHHH-Hhc---CC--Ee----CCHHHHHhcCCEEEECCC
Confidence            34569999999 9999999999997776  899999887322111 111   11  11    134678999999998754


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC
Q 017551           98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP  139 (369)
Q Consensus        98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP  139 (369)
                      .+               .++..  +.+...-+.+++++++-.
T Consensus       260 ~~---------------~vI~~--~~~~~mK~GailiN~G~~  284 (406)
T TIGR00936       260 NK---------------DVIRG--EHFENMKDGAIVANIGHF  284 (406)
T ss_pred             CH---------------HHHHH--HHHhcCCCCcEEEEECCC
Confidence            22               22221  133333467888888754

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates

Probab=94.49  E-value=0.14  Score=45.26  Aligned_cols=66  Identities=14%  Similarity=0.148  Sum_probs=42.3

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      +.++|+|||- |+.|...++.|...++  +|..-..........--.+. +    +    ..+..+|.+.||+|++..
T Consensus         3 ~~k~IAViGy-GsQG~a~AlNLrDSG~--~V~Vglr~~s~s~~~A~~~G-f----~----v~~~~eAv~~aDvV~~L~   68 (165)
T PF07991_consen    3 KGKTIAVIGY-GSQGHAHALNLRDSGV--NVIVGLREGSASWEKAKADG-F----E----VMSVAEAVKKADVVMLLL   68 (165)
T ss_dssp             CTSEEEEES--SHHHHHHHHHHHHCC---EEEEEE-TTCHHHHHHHHTT------E----CCEHHHHHHC-SEEEE-S
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHhCCC--CEEEEecCCCcCHHHHHHCC-C----e----eccHHHHHhhCCEEEEeC
Confidence            3569999999 9999999999999998  77766665432222211221 1    1    234679999999999983

This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.

>PRK06199 ornithine cyclodeaminase; Validated

Probab=94.48  E-value=0.16  Score=50.96  Aligned_cols=72  Identities=15%  Similarity=0.201  Sum_probs=51.4

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHh-CCCCcEEEEEeCCC--chhHHHHhhcccCC-CeEEEEeCCCChhhhcCCCcEEEEc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKI-NPLVSVLHLYDVVN--TPGVTADISHMDTG-AVVRGFLGQPQLENALTGMDLVIIP   95 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~-~~~~~el~L~D~~~--~~g~~~dL~~~~~~-~~v~~~~~t~dl~~al~~ADiVii~   95 (369)
                      ...++|||+ |..+...+..+.. .+.+.+|.+||.+.  +...+.++.+.... ..+..   .++.++++++||+|+.+
T Consensus       155 a~~l~iiG~-G~QA~~~l~a~~~v~~~i~~V~v~~r~~~~a~~f~~~~~~~~~~~~~v~~---~~s~~eav~~ADIVvta  230 (379)
T PRK06199        155 SKVVGLLGP-GVMGKTILAAFMAVCPGIDTIKIKGRGQKSLDSFATWVAETYPQITNVEV---VDSIEEVVRGSDIVTYC  230 (379)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCCceEEE---eCCHHHHHcCCCEEEEc
Confidence            469999999 9888887776665 44588999999987  34455556543111 13444   35678999999999975

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=94.47  E-value=0.44  Score=41.79  Aligned_cols=67  Identities=12%  Similarity=0.068  Sum_probs=44.4

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      +.+||.|||| |.+|...+..|...+.  +|++++.+.... ..++.      .+......-+ ++.++++|+||.+-
T Consensus        12 ~~~~vlVvGG-G~va~rka~~Ll~~ga--~V~VIsp~~~~~-l~~l~------~i~~~~~~~~-~~dl~~a~lViaaT   78 (157)
T PRK06719         12 HNKVVVIIGG-GKIAYRKASGLKDTGA--FVTVVSPEICKE-MKELP------YITWKQKTFS-NDDIKDAHLIYAAT   78 (157)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEcCccCHH-HHhcc------CcEEEecccC-hhcCCCceEEEECC
Confidence            3569999999 9999999999998887  899997543221 12232      1111111111 35689999999873

>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional

Probab=94.47  E-value=0.16  Score=51.07  Aligned_cols=62  Identities=16%  Similarity=0.196  Sum_probs=45.9

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      -..++|+|||. |.||+.++..+..-|.  ++..||.....      ..    ....    ..++++.++.||+|++..
T Consensus       114 L~gktvGIIG~-G~IG~~vA~~l~a~G~--~V~~~dp~~~~------~~----~~~~----~~~L~ell~~sDiI~lh~  175 (378)
T PRK15438        114 LHDRTVGIVGV-GNVGRRLQARLEALGI--KTLLCDPPRAD------RG----DEGD----FRSLDELVQEADILTFHT  175 (378)
T ss_pred             cCCCEEEEECc-CHHHHHHHHHHHHCCC--EEEEECCcccc------cc----cccc----cCCHHHHHhhCCEEEEeC
Confidence            34679999999 9999999999987777  99999964211      00    0011    236888899999999863

>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional

Probab=94.46  E-value=0.2  Score=49.26  Aligned_cols=93  Identities=19%  Similarity=0.128  Sum_probs=57.3

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      ..++|.|||. |.||+.++..+. .++.-+|+.||.........++       .++.    .++++.++.||+|++..  
T Consensus       144 ~gktvGIiG~-G~IG~~va~~l~-~~fgm~V~~~~~~~~~~~~~~~-------~~~~----~~l~ell~~sDvv~lh~--  208 (323)
T PRK15409        144 HHKTLGIVGM-GRIGMALAQRAH-FGFNMPILYNARRHHKEAEERF-------NARY----CDLDTLLQESDFVCIIL--  208 (323)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHH-hcCCCEEEEECCCCchhhHHhc-------CcEe----cCHHHHHHhCCEEEEeC--
Confidence            3479999999 999999998876 3333388888875321111111       1121    25788999999999974  


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      |..+.         +-.++..  +.++..-|++++||++
T Consensus       209 plt~~---------T~~li~~--~~l~~mk~ga~lIN~a  236 (323)
T PRK15409        209 PLTDE---------THHLFGA--EQFAKMKSSAIFINAG  236 (323)
T ss_pred             CCChH---------HhhccCH--HHHhcCCCCeEEEECC
Confidence            32221         1111111  2333345899999986

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=94.46  E-value=0.7  Score=42.07  Aligned_cols=112  Identities=17%  Similarity=0.211  Sum_probs=61.5

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeC-CCc--hhHHHHhhcccCCCeEEEEe-CCCCh---h-------hhcC
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV-VNT--PGVTADISHMDTGAVVRGFL-GQPQL---E-------NALT   87 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~-~~~--~g~~~dL~~~~~~~~v~~~~-~t~dl---~-------~al~   87 (369)
                      .+.|+||+|++|+.++..|+..+.  ++++... +..  .....++...  ..++..+. .-+|.   .       +.+.
T Consensus         2 ~~lItG~sg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (242)
T TIGR01829         2 IALVTGGMGGIGTAICQRLAKDGY--RVAANCGPNEERAEAWLQEQGAL--GFDFRVVEGDVSSFESCKAAVAKVEAELG   77 (242)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999998887  7888776 321  1111222211  12222221 11221   1       2234


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHH----HHHHHhhhCCCeEEEEecC
Q 017551           88 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRT----LCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        88 ~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~~----i~~~i~~~~p~a~viv~tN  138 (369)
                      ..|+||..+|.....   ..+   ....+..|..-...    +.+.+.+. +.+.++++|.
T Consensus        78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~iss  137 (242)
T TIGR01829        78 PIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRER-GWGRIINISS  137 (242)
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcc
Confidence            689999999864321   112   23345566554433    44444433 3445666664

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK06484 short chain dehydrogenase; Validated

Probab=94.45  E-value=0.11  Score=53.63  Aligned_cols=116  Identities=18%  Similarity=0.213  Sum_probs=67.3

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEE-eCCCChhhhc-------CCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF-LGQPQLENAL-------TGM   89 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~-~~t~dl~~al-------~~A   89 (369)
                      .+++.|+||+|++|..++..|+..+.  +|++.|.+..  ......+...  ...+... +...+..+.+       ...
T Consensus       269 ~k~~lItGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~g~i  344 (520)
T PRK06484        269 PRVVAITGGARGIGRAVADRFAAAGD--RLLIIDRDAEGAKKLAEALGDE--HLSVQADITDEAAVESAFAQIQARWGRL  344 (520)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhCCc--eeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999987  8999998752  2122222110  0111111 1111222222       457


Q ss_pred             cEEEEcCCCCC--CC--CCC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCC
Q 017551           90 DLVIIPAGVPR--KP--GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNP  139 (369)
Q Consensus        90 DiVii~ag~p~--k~--g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP  139 (369)
                      |++|..||...  .+  ..+   ....+..|+.-...+.+.+..+- ..+.|+++|.-
T Consensus       345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~  402 (520)
T PRK06484        345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSI  402 (520)
T ss_pred             CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECch
Confidence            99999998742  22  122   23445667665555555544332 34667777653

>PRK06484 short chain dehydrogenase; Validated

Probab=94.45  E-value=0.17  Score=52.37  Aligned_cols=114  Identities=18%  Similarity=0.146  Sum_probs=63.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEE-eCCCChhh-------hcCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF-LGQPQLEN-------ALTGM   89 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~-~~t~dl~~-------al~~A   89 (369)
                      .+.+.|+||++++|..++..|+..+.  .|+++|.+..  .....++....  ..+... +...++++       .+...
T Consensus         5 ~k~~lITGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (520)
T PRK06484          5 SRVVLVTGAAGGIGRAACQRFARAGD--QVVVADRNVERARERADSLGPDH--HALAMDVSDEAQIREGFEQLHREFGRI   80 (520)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhCCce--eEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            45889999999999999999999987  8999998752  22222221100  011111 11112222       23468


Q ss_pred             cEEEEcCCCC--C-CC--CCC---HHHHHHHHHH----HHHHHHHHHhhhCCCeEEEEec
Q 017551           90 DLVIIPAGVP--R-KP--GMT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        90 DiVii~ag~p--~-k~--g~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      |++|..+|..  . .+  ..+   ....+..|+.    +.+.+.+.+.+....+.+++++
T Consensus        81 D~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~is  140 (520)
T PRK06484         81 DVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVA  140 (520)
T ss_pred             CEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence            9999999872  1 11  122   2334556654    4444555554333333566665

>PRK00257 erythronate-4-phosphate dehydrogenase; Validated

Probab=94.45  E-value=0.14  Score=51.38  Aligned_cols=90  Identities=23%  Similarity=0.234  Sum_probs=59.1

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      ..++|+|||. |.||+.++..+..-|.  +++.||.....   .   .    ....    ..++++.++.||+|++..  
T Consensus       115 ~gktvGIIG~-G~IG~~va~~l~a~G~--~V~~~Dp~~~~---~---~----~~~~----~~~l~ell~~aDiV~lh~--  175 (381)
T PRK00257        115 AERTYGVVGA-GHVGGRLVRVLRGLGW--KVLVCDPPRQE---A---E----GDGD----FVSLERILEECDVISLHT--  175 (381)
T ss_pred             CcCEEEEECC-CHHHHHHHHHHHHCCC--EEEEECCcccc---c---c----cCcc----ccCHHHHHhhCCEEEEeC--
Confidence            4579999999 9999999999987777  99999975311   0   0    0111    135788889999999973  


Q ss_pred             CCCC-C--CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           99 PRKP-G--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        99 p~k~-g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      |..+ |  .++ .++  |.       +.+....|++++||++
T Consensus       176 Plt~~g~~~T~-~li--~~-------~~l~~mk~gailIN~a  207 (381)
T PRK00257        176 PLTKEGEHPTR-HLL--DE-------AFLASLRPGAWLINAS  207 (381)
T ss_pred             cCCCCcccccc-ccC--CH-------HHHhcCCCCeEEEECC
Confidence            4322 1  121 111  11       2344445788888886

>TIGR00518 alaDH alanine dehydrogenase

Probab=94.42  E-value=0.12  Score=51.67  Aligned_cols=76  Identities=18%  Similarity=0.192  Sum_probs=51.3

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEE-eCCCChhhhcCCCcEEEEcC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~-~~t~dl~~al~~ADiVii~a   96 (369)
                      .++.||+|+|+ |.+|...+..++..+.  +|..+|.+....  ..+.... ...+... ....++.+.++++|+||.+.
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa--~V~v~d~~~~~~--~~l~~~~-g~~v~~~~~~~~~l~~~l~~aDvVI~a~  238 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGA--TVTILDINIDRL--RQLDAEF-GGRIHTRYSNAYEIEDAVKRADLLIGAV  238 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCC--eEEEEECCHHHH--HHHHHhc-CceeEeccCCHHHHHHHHccCCEEEEcc
Confidence            45678999999 9999999999998886  799999875221  1111111 1112211 11235677889999999987


Q ss_pred             CCC
Q 017551           97 GVP   99 (369)
Q Consensus        97 g~p   99 (369)
                      +.|
T Consensus       239 ~~~  241 (370)
T TIGR00518       239 LIP  241 (370)
T ss_pred             ccC
Confidence            654

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PLN02494 adenosylhomocysteinase

Probab=94.41  E-value=0.25  Score=50.84  Aligned_cols=93  Identities=22%  Similarity=0.165  Sum_probs=62.6

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch-hHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~-g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      ...+|+|+|. |.+|+.++..+...+.  +|+.+|++..+ ..+.+..     ..  .    .+++++++++|+||.+.|
T Consensus       253 aGKtVvViGy-G~IGr~vA~~aka~Ga--~VIV~e~dp~r~~eA~~~G-----~~--v----v~leEal~~ADVVI~tTG  318 (477)
T PLN02494        253 AGKVAVICGY-GDVGKGCAAAMKAAGA--RVIVTEIDPICALQALMEG-----YQ--V----LTLEDVVSEADIFVTTTG  318 (477)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCchhhHHHHhcC-----Ce--e----ccHHHHHhhCCEEEECCC
Confidence            4579999999 9999999999987776  89999998632 2222111     11  1    135678999999999754


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCC
Q 017551           98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS  142 (369)
Q Consensus        98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~  142 (369)
                      ..               .++.  .+.+...-+.+++++++-+.+.
T Consensus       319 t~---------------~vI~--~e~L~~MK~GAiLiNvGr~~~e  346 (477)
T PLN02494        319 NK---------------DIIM--VDHMRKMKNNAIVCNIGHFDNE  346 (477)
T ss_pred             Cc---------------cchH--HHHHhcCCCCCEEEEcCCCCCc
Confidence            32               1111  2344444578999999876433

>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.40  E-value=0.13  Score=49.82  Aligned_cols=58  Identities=22%  Similarity=0.390  Sum_probs=45.3

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      -+.++|+|||.|..||.+++.+|.+++.  .+..+.                       +.|.|+++.++.||+||.+.|
T Consensus       156 l~Gk~vvVIGrS~iVGkPla~lL~~~~a--tVtv~h-----------------------s~T~~l~~~~~~ADIvIsAvG  210 (297)
T PRK14186        156 IAGKKAVVVGRSILVGKPLALMLLAANA--TVTIAH-----------------------SRTQDLASITREADILVAAAG  210 (297)
T ss_pred             CCCCEEEEECCCccchHHHHHHHHHCCC--EEEEeC-----------------------CCCCCHHHHHhhCCEEEEccC
Confidence            3457999999999999999999988764  444432                       124577788999999999998


Q ss_pred             CCC
Q 017551           98 VPR  100 (369)
Q Consensus        98 ~p~  100 (369)
                      .|.
T Consensus       211 kp~  213 (297)
T PRK14186        211 RPN  213 (297)
T ss_pred             CcC
Confidence            773

>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.39  E-value=0.13  Score=49.64  Aligned_cols=57  Identities=25%  Similarity=0.499  Sum_probs=44.4

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHh--CCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKI--NPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~--~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      +.++|+|||.|..||.+++.+|..  .+.  .|.++..                       .|.++++.++.||+||.++
T Consensus       157 ~Gk~vvViGrS~~VGkPla~lL~~~~~~a--tVtvchs-----------------------~T~~l~~~~k~ADIvV~Av  211 (284)
T PRK14193        157 AGAHVVVIGRGVTVGRPIGLLLTRRSENA--TVTLCHT-----------------------GTRDLAAHTRRADIIVAAA  211 (284)
T ss_pred             CCCEEEEECCCCcchHHHHHHHhhccCCC--EEEEeCC-----------------------CCCCHHHHHHhCCEEEEec
Confidence            467999999999999999999986  343  4444322                       2457888899999999999


Q ss_pred             CCCC
Q 017551           97 GVPR  100 (369)
Q Consensus        97 g~p~  100 (369)
                      |.|.
T Consensus       212 Gkp~  215 (284)
T PRK14193        212 GVAH  215 (284)
T ss_pred             CCcC
Confidence            8874

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=94.38  E-value=0.27  Score=49.57  Aligned_cols=35  Identities=23%  Similarity=0.501  Sum_probs=31.1

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ..||.|+|+ |++|+.++..|+..|. .+|.|+|-+.
T Consensus        42 ~~~VlviG~-GGlGs~va~~La~~Gv-g~i~lvD~D~   76 (392)
T PRK07878         42 NARVLVIGA-GGLGSPTLLYLAAAGV-GTLGIVEFDV   76 (392)
T ss_pred             cCCEEEECC-CHHHHHHHHHHHHcCC-CeEEEECCCE
Confidence            459999999 9999999999999885 5899999875

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=94.38  E-value=0.88  Score=42.57  Aligned_cols=32  Identities=22%  Similarity=0.224  Sum_probs=27.9

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCC
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV   55 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~   55 (369)
                      .+.|+||+|++|..++..|...|.  +|++.+.+
T Consensus         3 ~~lITGas~gIG~~~a~~l~~~G~--~V~~~~~~   34 (267)
T TIGR02685         3 AAVVTGAAKRIGSSIAVALHQEGY--RVVLHYHR   34 (267)
T ss_pred             EEEEeCCCCcHHHHHHHHHHhCCC--eEEEEcCC
Confidence            688999999999999999999887  88887543

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane]

Probab=94.37  E-value=0.22  Score=50.98  Aligned_cols=127  Identities=22%  Similarity=0.238  Sum_probs=78.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch-hHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~-g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      .+||+|+|- |.-|.+++..|...+.  ++..+|.++.. +... ...  ....+....+..+. +...++|+||..-|+
T Consensus         7 ~~kv~V~GL-G~sG~a~a~~L~~~G~--~v~v~D~~~~~~~~~~-~~~--~~~~i~~~~g~~~~-~~~~~~d~vV~SPGi   79 (448)
T COG0771           7 GKKVLVLGL-GKSGLAAARFLLKLGA--EVTVSDDRPAPEGLAA-QPL--LLEGIEVELGSHDD-EDLAEFDLVVKSPGI   79 (448)
T ss_pred             CCEEEEEec-ccccHHHHHHHHHCCC--eEEEEcCCCCccchhh-hhh--hccCceeecCccch-hccccCCEEEECCCC
Confidence            689999999 9999999999999997  99999987722 1111 110  11333433333333 678999999999888


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhh--CCCeEEEEe-cCCCCChhHHHHHHHHHhCCC
Q 017551           99 PRKPGMTRDDLFNINAGIVRTLCEGIAKC--CPNATVNLI-SNPVNSTVPIAAEVFKKAGTY  157 (369)
Q Consensus        99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~--~p~a~viv~-tNPv~~~t~i~ae~~~~~~~~  157 (369)
                      |...-+ -.......++++-++--..+..  +|  ||.|- ||==.++|.++++.++.. |+
T Consensus        80 ~~~~p~-v~~A~~~gi~i~~dieL~~r~~~~~p--~vaITGTNGKTTTTsli~~~l~~~-G~  137 (448)
T COG0771          80 PPTHPL-VEAAKAAGIEIIGDIELFYRLSGEAP--IVAITGTNGKTTTTSLIAHLLKAA-GL  137 (448)
T ss_pred             CCCCHH-HHHHHHcCCcEEeHHHHHHHhcCCCC--EEEEECCCchHHHHHHHHHHHHhc-CC
Confidence            753321 1122245566666665555543  33  44333 565556667776666554 44

>PRK06436 glycerate dehydrogenase; Provisional

Probab=94.37  E-value=0.17  Score=49.33  Aligned_cols=94  Identities=21%  Similarity=0.320  Sum_probs=60.4

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      ..++|+|+|- |.||+.++..++.-+.  +|+.||.....       +     .+...  ..++++.++.||+|++..  
T Consensus       121 ~gktvgIiG~-G~IG~~vA~~l~afG~--~V~~~~r~~~~-------~-----~~~~~--~~~l~ell~~aDiv~~~l--  181 (303)
T PRK06436        121 YNKSLGILGY-GGIGRRVALLAKAFGM--NIYAYTRSYVN-------D-----GISSI--YMEPEDIMKKSDFVLISL--  181 (303)
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCC--EEEEECCCCcc-------c-----Ccccc--cCCHHHHHhhCCEEEECC--
Confidence            3579999999 9999999987776666  99999975311       0     01110  135788999999999984  


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec--CCCCC
Q 017551           99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS--NPVNS  142 (369)
Q Consensus        99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t--NPv~~  142 (369)
                      |..+. ++        .++.  .+.++..-|.+++|+++  .++|.
T Consensus       182 p~t~~-T~--------~li~--~~~l~~mk~ga~lIN~sRG~~vd~  216 (303)
T PRK06436        182 PLTDE-TR--------GMIN--SKMLSLFRKGLAIINVARADVVDK  216 (303)
T ss_pred             CCCch-hh--------cCcC--HHHHhcCCCCeEEEECCCccccCH
Confidence            32211 11        1111  23344445789999986  45544

>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1

Probab=94.36  E-value=0.35  Score=46.73  Aligned_cols=73  Identities=19%  Similarity=0.267  Sum_probs=49.1

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-----h--------------hH--HHHhhcccCCCeEEEEeCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-----P--------------GV--TADISHMDTGAVVRGFLGQ   79 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-----~--------------g~--~~dL~~~~~~~~v~~~~~t   79 (369)
                      .||.|+|+ |.+|+.++..|+..|. .+|.|+|.+..     .              +.  +..|.......+++.+...
T Consensus        20 s~VLIvG~-gGLG~EiaKnLalaGV-g~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~~~~   97 (286)
T cd01491          20 SNVLISGL-GGLGVEIAKNLILAGV-KSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPVTVSTGP   97 (286)
T ss_pred             CcEEEEcC-CHHHHHHHHHHHHcCC-CeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEEEEEecc
Confidence            49999999 9999999999999985 58999998751     0              00  1112222223445544332


Q ss_pred             CChhhhcCCCcEEEEcC
Q 017551           80 PQLENALTGMDLVIIPA   96 (369)
Q Consensus        80 ~dl~~al~~ADiVii~a   96 (369)
                      .+ ++-+.+.|+||.+.
T Consensus        98 ~~-~~~l~~fdvVV~~~  113 (286)
T cd01491          98 LT-TDELLKFQVVVLTD  113 (286)
T ss_pred             CC-HHHHhcCCEEEEec
Confidence            22 46789999998884

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.36  E-value=0.13  Score=50.01  Aligned_cols=57  Identities=18%  Similarity=0.394  Sum_probs=45.8

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      -+.++|+|||.+|.+|.+++..|...+.  +|.+++...                       .++.++++.||+||.+.|
T Consensus       156 ~~Gk~V~viGrs~~mG~PmA~~L~~~g~--tVtv~~~rT-----------------------~~l~e~~~~ADIVIsavg  210 (296)
T PRK14188        156 LSGLNAVVIGRSNLVGKPMAQLLLAANA--TVTIAHSRT-----------------------RDLPAVCRRADILVAAVG  210 (296)
T ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhCCC--EEEEECCCC-----------------------CCHHHHHhcCCEEEEecC
Confidence            4567999999889999999999998887  888885321                       135678899999999876


Q ss_pred             CC
Q 017551           98 VP   99 (369)
Q Consensus        98 ~p   99 (369)
                      .|
T Consensus       211 ~~  212 (296)
T PRK14188        211 RP  212 (296)
T ss_pred             Ch
Confidence            55

>PRK06483 dihydromonapterin reductase; Provisional

Probab=94.36  E-value=0.51  Score=43.12  Aligned_cols=34  Identities=21%  Similarity=0.134  Sum_probs=30.9

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      +.+.|+||+|++|..++..|+.++.  +|++.|.+.
T Consensus         3 k~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~   36 (236)
T PRK06483          3 APILITGAGQRIGLALAWHLLAQGQ--PVIVSYRTH   36 (236)
T ss_pred             ceEEEECCCChHHHHHHHHHHHCCC--eEEEEeCCc
Confidence            4799999999999999999999887  899999875

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	369
1sev_A	362	Mature And Translocatable Forms Of Glyoxysomal Mala		1e-154
1smk_A	326	Mature And Translocatable Forms Of Glyoxysomal Mala		1e-149
1mld_A	314	Refined Structure Of Mitochondrial Malate Dehydroge		1e-89
2dfd_A	342	Crystal Structure Of Human Malate Dehydrogenase Typ		7e-89
2pwz_A	312	Crystal Structure Of The Apo Form Of E.Coli Malate		2e-79
1emd_A	312	Crystal Structure Of A Ternary Complex Of Escherich		4e-79
1ib6_A	312	Crystal Structure Of R153c E. Coli Malate Dehydroge		6e-78
4e0b_A	313	2.17 Angstrom Resolution Crystal Structure Of Malat		2e-75
3p7m_A	321	Structure Of Putative Lactate Dehydrogenase From Fr		5e-19
1gv1_A	310	Structural Basis For Thermophilic Protein Stability		8e-17
1guz_A	310	Structural Basis For Thermophilic Protein Stability		1e-16
3tl2_A	315	Crystal Structure Of Bacillus Anthracis Str. Ames M		2e-16
3gvh_A	324	Crystal Structure Of LactateMALATE DEHYDROGENASE FR		8e-16
1uxh_A	309	Large Improvement In The Thermal Stability Of A Tet		6e-15
1uxi_A	309	Large Improvement In The Thermal Stability Of A Tet		6e-15
1guy_A	309	Structural Basis For Thermophilic Protein Stability		7e-15
2hjr_A	328	Crystal Structure Of Cryptosporidium Parvum Malate		1e-14
1ur5_A	309	Stabilization Of A Tetrameric Malate Dehydrogenase		2e-14
1gv0_A	310	Structural Basis For Thermophilic Protein Stability		2e-14
3om9_A	329	T. Gondii Bradyzoite-Specific Ldh (Ldh1) In Complex		9e-12
3czm_A	326	T. Gondii Bradyzoite-Specific Ldh (Ldh2) In Complex		9e-12
1sov_A	328	Toxoplasma Gondii Bradyzoite-specific Ldh (ldh2) Ap		1e-11
1pze_A	331	T.gondii Ldh1 Apo Form Length = 331		1e-11
1pzg_A	331	T.Gondii Ldh1 Complexed With Apad And Sulfate At 1.		1e-11
1a5z_A	319	Lactate Dehydrogenase From Thermotoga Maritima (tml		1e-11
1t24_A	322	Plasmodium Falciparum Lactate Dehydrogenase Complex		8e-11
1u4o_A	321	Plasmodium Falciparum Lactate Dehydrogenase Complex		8e-11
2d4a_A	308	Structure Of The Malate Dehydrogenase From Aeropyru		9e-11
1xiv_A	323	Plasmodium Falciparum Lactate Dehydrogenase Complex		9e-11
1ceq_A	316	Chloroquine Binds In The Cofactor Binding Site Of P		9e-11
3nep_X	314	1.55a Resolution Structure Of Malate Dehydrogenase		1e-10
2hlp_A	303	Crystal Structure Of The E267r Mutant Of A Halophil		1e-10
2j5k_A	304	2.0 A Resolution Structure Of The Wild Type Malate		1e-10
1hlp_A	303	Structural Features Stabilizing Halophilic Malate D		1e-10
2ewd_A	317	Crystal Structure Of The Lactate Dehydrogenase From		3e-10
1hyg_A	313	Crystal Structure Of Mj0490 Gene Product, The Famil		4e-10
1y6j_A	318	L-Lactate Dehydrogenase From Clostridium Thermocell		4e-10
2fm3_A	321	Crystal Structure Of The Lactate Dehydrogenase From		5e-10
3fi9_A	343	Crystal Structure Of Malate Dehydrogenase From Porp		1e-09
2a92_A	321	Crystal Structure Of Lactate Dehydrogenase From Pla		1e-09
1cet_A	316	Chloroquine Binds In The Cofactor Binding Site Of P		2e-09
1oc4_A	322	Lactate Dehydrogenase From Plasmodium Berghei Lengt		2e-09
2x0r_A	304	R207s,R292s Mutant Of Malate Dehydrogenase From The		2e-09
1o6z_A	303	1.95 A Resolution Structure Of (r207s,r292s) Mutant		2e-09
1t2e_A	322	Plasmodium Falciparum Lactate Dehydrogenase S245a,		6e-09
2x0i_A	294	2.9 A Resolution Structure Of Malate Dehydrogenase		3e-08
4h7p_A	345	Crystal Structure Of A Putative Cytosolic Malate De		2e-07
1bmd_A	327	Determinants Of Protein Thermostability Observed In		1e-05
3d0o_A	317	Crystal Structure Of Lactate Dehydrogenase From Sta		1e-05
2v6b_A	304	Crystal Structure Of Lactate Dehydrogenase From Dei		1e-05
1bdm_A	327	The Structure At 1.8 Angstroms Resolution Of A Sing		1e-05
3h3j_A	317	Crystal Structure Of Lactate Dehydrogenase Mutant (		1e-05
1iz9_A	327	Crystal Structure Of Malate Dehydrogenase From Ther		1e-05
1lld_A	319	Molecular Basis Of Allosteric Activation Of Bacteri		2e-05
2zqy_A	326	T-State Structure Of Allosteric L-Lactate Dehydroge		2e-05
1i10_A	331	Human Muscle L-Lactate Dehydrogenase M Chain, Terna		3e-05
4ajp_A	337	Human Ldha In Complex With 2-((4-(4-((3-((2-Methyl-		3e-05
1ldb_A	317	Structure Determination And Refinement Of Bacillus		3e-05
1ldn_A	316	Structure Of A Ternary Complex Of An Allosteric Lac		4e-05
2ldx_A	331	Characterization Of The Antigenic Sites On The Refi		4e-05
1wze_A	327	Structural Basis For Alteration Of Cofactor Specifi		4e-05
3vku_A	326	Penta Mutant Of Lactobacillus Casei Lactate Dehydro		4e-05
1llc_A	325	Structure Determination Of The Allosteric L-Lactate		4e-05
2e37_A	310	Structure Of Tt0471 Protein From Thermus Thermophil		7e-05
4a73_A	310	Single Point Mutant Of Thermus Thermophilus Lactate		8e-05
2v6m_A	310	Crystal Structure Of Lactate Dehydrogenase From The		9e-05
3h3f_A	331	Rabbit Muscle L-Lactate Dehydrogenase In Complex Wi		2e-04
2xxb_A	310	Penta-Mutant Of Thermus Thermophilus Lactate Dehydr		2e-04
9ldt_A	332	Design And Synthesis Of New Enzymes Based On The La		3e-04
3pqd_A	326	Crystal Structure Of L-Lactate Dehydrogenase From B		4e-04
1civ_A	385	Chloroplast Nadp-Dependent Malate Dehydrogenase Fro		5e-04
3pqe_A	326	Crystal Structure Of L-Lactate Dehydrogenase From B		7e-04
4aj1_A	331	Rat Ldha In Complex With N-(2-(Methylamino)-1,3- Be		8e-04
4aj4_A	332	Rat Ldha In Complex With 4-((2-Allylsulfanyl-1,3-Be		8e-04
6ldh_A	330	Refined Crystal Structure Of Dogfish M4 Apo-Lactate		8e-04
1ldm_A	329	Refined Crystal Structure Of Dogfish M4 Apo-Lactate		8e-04

>pdb|1SEV|A Chain A, Mature And Translocatable Forms Of Glyoxysomal Malate Dehydrogenase Have Different Activities And Stabilities But Similar Crystal Structures Length = 362

Iteration: 1
 Score =  540 bits (1390), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 271/335 (80%), Positives = 287/335 (85%), Gaps = 3/335 (0%)
Query: 1   MEENSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV 60
           MEE+S LR+A CRAKGGA GFKVAILGAAGGIGQPLAMLMK+NPLVSVLHLYDVVN PGV
Sbjct: 25  MEESSALRRANCRAKGGAPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGV 84
Query: 61  TADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTL 120
           TADISHMDTGAVVRGFLGQ QLE ALTGMDL+I+PAGVPRKPGMTRDDLF INAGIV+TL
Sbjct: 85  TADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTL 144
Query: 121 CEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEX 180
           CEGIAKCCP A VNLISNPVNSTVPIAAEVFKKAGTYDPK+LLGVTMLDVVRANTFVAE 
Sbjct: 145 CEGIAKCCPRAIVNLISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTMLDVVRANTFVAEV 204
Query: 181 XXXXXXXXXXXXXXXHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGA 240
                          HAGVTILPLLSQVKPP SFTQEE  YLT+RIQNGGTEVVEAKAGA
Sbjct: 205 LGLDPRDVDVPVVGGHAGVTILPLLSQVKPPSSFTQEEISYLTDRIQNGGTEVVEAKAGA 264
Query: 241 GSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQ 300
           GSATLSMAYAAVKFADACLRGLRGDAGV+ECAFV+SQVTELPFFASKVRLGR G EE++ 
Sbjct: 265 GSATLSMAYAAVKFADACLRGLRGDAGVIECAFVSSQVTELPFFASKVRLGRNGIEEVYS 324
Query: 301 LGPLNEYESGLFCLLHLCFQDWLGESEERVSWKHS 335
           LGPLNEYE      L    ++  G  E+ VS+  S
Sbjct: 325 LGPLNEYER---IGLEKAKKELAGSIEKGVSFIRS 356

>pdb|1SMK|A Chain A, Mature And Translocatable Forms Of Glyoxysomal Malate Dehydrogenase Have Different Activities And Stabilities But Similar Crystal Structures Length = 326

Iteration: 1
 Score =  523 bits (1346), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 263/323 (81%), Positives = 277/323 (85%), Gaps = 3/323 (0%)
Query: 13  RAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAV 72
           RAKGGA GFKVAILGAAGGIGQPLAMLMK+NPLVSVLHLYDVVN PGVTADISHMDTGAV
Sbjct: 1   RAKGGAPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAV 60
Query: 73  VRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAT 132
           VRGFLGQ QLE ALTGMDL+I+PAGVPRKPGMTRDDLF INAGIV+TLCEGIAKCCP A 
Sbjct: 61  VRGFLGQQQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAI 120
Query: 133 VNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXX 192
           VNLISNPVNSTVPIAAEVFKKAGTYDPK+LLGVTMLDVVRANTFVAE             
Sbjct: 121 VNLISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPRDVDVPV 180
Query: 193 XXXHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAV 252
              HAGVTILPLLSQVKPP SFTQEE  YLT+RIQNGGTEVVEAKAGAGSATLSMAYAAV
Sbjct: 181 VGGHAGVTILPLLSQVKPPSSFTQEEISYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAV 240
Query: 253 KFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLF 312
           KFADACLRGLRGDAGV+ECAFV+SQVTELPFFASKVRLGR G EE++ LGPLNEYE    
Sbjct: 241 KFADACLRGLRGDAGVIECAFVSSQVTELPFFASKVRLGRNGIEEVYSLGPLNEYER--- 297
Query: 313 CLLHLCFQDWLGESEERVSWKHS 335
             L    ++  G  E+ VS+  S
Sbjct: 298 IGLEKAKKELAGSIEKGVSFIRS 320

>pdb|1MLD|A Chain A, Refined Structure Of Mitochondrial Malate Dehydrogenase From Porcine Heart And The Consensus Structure For Dicarboxylic Acid Oxidoreductases Length = 314

Iteration: 1
 Score =  326 bits (836), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 161/291 (55%), Positives = 208/291 (71%)
Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 81
           KVA+LGA+GGIGQPL++L+K +PLVS L LYD+ +TPGV AD+SH++T A V+G+LG  Q
Sbjct: 2   KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQ 61
Query: 82  LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 141
           L + L G D+V+IPAGVPRKPGMTRDDLFN NA IV TL    A+ CP+A + +ISNPVN
Sbjct: 62  LPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPVN 121
Query: 142 STVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTI 201
           ST+PI AEVFKK G Y+P K+ GVT LD+VRAN FVAE                HAG TI
Sbjct: 122 STIPITAEVFKKHGVYNPNKIFGVTTLDIVRANAFVAELKGLDPARVSVPVIGGHAGKTI 181
Query: 202 LPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRG 261
           +PL+SQ  P   F Q++   LT RIQ  GTEVV+AKAGAGSATLSMAYA  +F  + +  
Sbjct: 182 IPLISQCTPKVDFPQDQLSTLTGRIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLVDA 241
Query: 262 LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLF 312
           + G  GVVEC+FV SQ T+ P+F++ + LG++G E+   +G ++ +E  + 
Sbjct: 242 MNGKEGVVECSFVKSQETDCPYFSTPLLLGKKGIEKNLGIGKISPFEEKMI 292

>pdb|2DFD|A Chain A, Crystal Structure Of Human Malate Dehydrogenase Type 2 Length = 342

Iteration: 1
 Score =  323 bits (829), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 161/291 (55%), Positives = 207/291 (71%)
Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 81
           KVA+LGA+GGIGQPL++L+K +PLVS L LYD+ +TPGV AD+SH++T A V+G+LG  Q
Sbjct: 30  KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETKAAVKGYLGPEQ 89
Query: 82  LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 141
           L + L G D+V+IPAGVPRKPGMTRDDLFN NA IV TL    A+ CP A + +I+NPVN
Sbjct: 90  LPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPEAMICVIANPVN 149
Query: 142 STVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTI 201
           ST+PI AEVFKK G Y+P K+ GVT LD+VRANTFVAE                HAG TI
Sbjct: 150 STIPITAEVFKKHGVYNPNKIFGVTTLDIVRANTFVAELKGLDPARVNVPVIGGHAGKTI 209
Query: 202 LPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRG 261
           +PL+SQ  P   F Q++   LT RIQ  GTEVV+AKAGAGSATLSMAYA  +F  + +  
Sbjct: 210 IPLISQCTPKVDFPQDQLTALTGRIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLVDA 269
Query: 262 LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLF 312
           + G  GVVEC+FV SQ TE  +F++ + LG++G E+   +G ++ +E  + 
Sbjct: 270 MNGKEGVVECSFVKSQETECTYFSTPLLLGKKGIEKNLGIGKVSSFEEKMI 320

>pdb|2PWZ|A Chain A, Crystal Structure Of The Apo Form Of E.Coli Malate Dehydrogenase Length = 312

Iteration: 1
 Score =  292 bits (747), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 164/309 (53%), Positives = 204/309 (66%), Gaps = 6/309 (1%)
Query: 21  FKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLG 78
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G
Sbjct: 1   MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSG 60
Query: 79  QPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN 138
           +     AL G D+V+I AGV RKPGM R DLFN+NAGIV+ L + +AK CP A + +I+N
Sbjct: 61  EDATP-ALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN 119
Query: 139 PVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAG 198
           PVN+TV IAAEV KKAG YD  KL GVT LD++R+NTFVAE                H+G
Sbjct: 120 PVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSG 179
Query: 199 VTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADAC 258
           VTILPLLSQV P  SFT++E   LT RIQN GTEVVEAKAG GSATLSM  AA +F  + 
Sbjct: 180 VTILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSL 238
Query: 259 LRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYE-SGLFCLLHL 317
           +R L+G+ GVVECA+V        FF+  + LG+ G EE   +G L+ +E + L  +L  
Sbjct: 239 VRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDT 298
Query: 318 CFQDW-LGE 325
             +D  LGE
Sbjct: 299 LKKDIALGE 307

>pdb|1EMD|A Chain A, Crystal Structure Of A Ternary Complex Of Escherichia Coli Malate Dehydrogenase, Citrate And Nad At 1.9 Angstroms Resolution Length = 312

Iteration: 1
 Score =  291 bits (745), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 158/290 (54%), Positives = 195/290 (67%), Gaps = 4/290 (1%)
Query: 21  FKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLG 78
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G
Sbjct: 1   MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSG 60
Query: 79  QPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN 138
           +     AL G D+V+I AGV RKPGM R DLFN+NAGIV+ L + +AK CP A + +I+N
Sbjct: 61  EDATP-ALEGADVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN 119
Query: 139 PVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAG 198
           PVN+TV IAAEV KKAG YD  KL GVT LD++R+NTFVAE                H+G
Sbjct: 120 PVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSG 179
Query: 199 VTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADAC 258
           VTILPLLSQV P  SFT++E   LT RIQN GTEVVEAKAG GSATLSM  AA +F  + 
Sbjct: 180 VTILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSL 238
Query: 259 LRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYE 308
           +R L+G+ GVVECA+V        FF+  + LG+ G EE   +G L+ +E
Sbjct: 239 VRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFE 288

>pdb|1IB6|A Chain A, Crystal Structure Of R153c E. Coli Malate Dehydrogenase Length = 312

Iteration: 1
 Score =  287 bits (735), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 157/290 (54%), Positives = 194/290 (66%), Gaps = 4/290 (1%)
Query: 21  FKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLG 78
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G
Sbjct: 1   MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSG 60
Query: 79  QPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN 138
           +     AL G D+V+I AGV RKPGM R DLFN+NAGIV+ L + +AK CP A + +I+N
Sbjct: 61  E-DATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN 119
Query: 139 PVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAG 198
           PVN+TV IAAEV KKAG YD  KL GVT LD++ +NTFVAE                H+G
Sbjct: 120 PVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIICSNTFVAELKGKQPGEVEVPVIGGHSG 179
Query: 199 VTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADAC 258
           VTILPLLSQV P  SFT++E   LT RIQN GTEVVEAKAG GSATLSM  AA +F  + 
Sbjct: 180 VTILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSL 238
Query: 259 LRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYE 308
           +R L+G+ GVVECA+V        FF+  + LG+ G EE   +G L+ +E
Sbjct: 239 VRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFE 288

>pdb|4E0B|A Chain A, 2.17 Angstrom Resolution Crystal Structure Of Malate Dehydrogenase From Vibrio Vulnificus Cmcp6 Length = 313

Iteration: 1
 Score =  279 bits (713), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 156/289 (53%), Positives = 195/289 (67%), Gaps = 5/289 (1%)
Query: 22  KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQ 79
           KVA++GAAGGIGQ LA+L+K   P  S L LYD+   TPGV AD+SH+ T   ++G+ G+
Sbjct: 5   KVAVIGAAGGIGQALALLLKNRLPAGSDLALYDIAPVTPGVAADLSHIPTHVSIKGYAGE 64
Query: 80  PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 139
                AL G D+V+I AGV RKPG  R DLFN+NAGIV++L E IA  CPNA + +I+NP
Sbjct: 65  DPTP-ALEGADVVLISAGVARKPGXDRADLFNVNAGIVKSLAERIAVVCPNACIGIITNP 123
Query: 140 VNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGV 199
           VN+TVPIAAEV KKAG YD +KL GVT LDV+R+ TFVAE                H+GV
Sbjct: 124 VNTTVPIAAEVLKKAGVYDKRKLFGVTTLDVIRSETFVAELKGQDPGEVRVPVIGGHSGV 183
Query: 200 TILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACL 259
           TILPLLSQV+    F+ EE   LT RIQN GTEVVEAKAG GSATLS   AA +F  A +
Sbjct: 184 TILPLLSQVE-GVEFSDEEIAALTKRIQNAGTEVVEAKAGGGSATLSXGQAACRFGLALV 242
Query: 260 RGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYE 308
           + L+G+  V+E A+V        FFA  V+LG++G EEI   G L+++E
Sbjct: 243 KALQGEE-VIEYAYVEGNGEHASFFAQPVKLGKEGVEEILPYGELSDFE 290

>pdb|3P7M|A Chain A, Structure Of Putative Lactate Dehydrogenase From Francisella Tularensis Subsp. Tularensis Schu S4 Length = 321

Iteration: 1
 Score = 92.0 bits (227), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/255 (32%), Positives = 123/255 (48%), Gaps = 27/255 (10%)
Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAV------VRG 75
           K+ ++GA G IG  LA L  I  L  V+ L+D+         +  + T  +      VRG
Sbjct: 7   KITLVGA-GNIGGTLAHLALIKQLGDVV-LFDIAQGXPNGKALDLLQTCPIEGVDFKVRG 64
Query: 76  FLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL 135
                 LEN+    D+VI+ AGVPRKPG +RDDL  IN  + +T+ EGI   CPNA V  
Sbjct: 65  TNDYKDLENS----DVVIVTAGVPRKPGXSRDDLLGINIKVXQTVGEGIKHNCPNAFVIC 120
Query: 136 ISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXX 195
           I+NP++  V     + K +G  D K +    +LD  R  TF+A+                
Sbjct: 121 ITNPLDIXV---NXLQKFSGVPDNKIVGXAGVLDSARFRTFLADELNVSVQQVQAYVXGG 177
Query: 196 HAGVTILPL----------LSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATL 245
           H G T +PL          L Q+       QE  + + +R ++GG E+V A    GSA  
Sbjct: 178 H-GDTXVPLTKXSNVAGVSLEQLVKEGKLKQERLDAIVSRTRSGGGEIV-ALLKTGSAYY 235
Query: 246 SMAYAAVKFADACLR 260
           + A A ++ A++ L+
Sbjct: 236 APAAAGIQXAESFLK 250

>pdb|1GV1|A Chain A, Structural Basis For Thermophilic Protein Stability: Structures Of Thermophilic And Mesophilic Malate Dehydrogenases Length = 310

Iteration: 1
 Score = 84.7 bits (208), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 136/306 (44%), Gaps = 50/306 (16%)
Query: 21  FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQP 80
            K+ ++GA G +G   A  +    L   L L DVV        +   +TG V  G     
Sbjct: 1   MKITVIGA-GNVGATTAFRIADKKLARELVLLDVVEGIPQGKGLDMYETGPV--GLF--- 54
Query: 81  QLENALTGM---------DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNA 131
             +  +TG          D+VII AG+PRKPGMTR+DL   NAGIV+ + + I K   N 
Sbjct: 55  --DTKITGSNDYADTADSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNP 112
Query: 132 TVNLISNPVNSTVPIAAEVFKKAGTYDPK-KLLGVT-MLDVVRANTFVAEXXXXXXXXXX 189
            + ++SNP++    +A   + ++G   PK +++G+  +LD  R  +F+A           
Sbjct: 113 IIIVVSNPLDIMTHVA---WVRSGL--PKERVIGMAGVLDAARFRSFIAMELGVSMQDIN 167
Query: 190 XXXXXXH--AGVTILPLLSQVKPPCS--FTQEETEYLTNRIQNGGTEVVEAKAGAGSATL 245
                 H  A V ++   +    P S     E  + L  R +NGG E+VE     GSA  
Sbjct: 168 ACVLGGHGDAMVPVVKYTTVAGIPISDLLPAETIDKLVERTRNGGAEIVE-HLKQGSAFY 226
Query: 246 SMAYAAVKFADA----------CLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGA 295
           + A + V+  ++          C  GL G  G+           +  F    V+LGR G 
Sbjct: 227 APASSVVEMVESIVLDRKRVLPCAVGLEGQYGI-----------DKTFVGVPVKLGRNGV 275
Query: 296 EEIFQL 301
           E+I+++
Sbjct: 276 EQIYEI 281

>pdb|1GUZ|A Chain A, Structural Basis For Thermophilic Protein Stability: Structures Of Thermophilic And Mesophilic Malate Dehydrogenases Length = 310

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 135/303 (44%), Gaps = 44/303 (14%)
Query: 21  FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAV------VR 74
            K+ ++GA G +G   A  +    L   L L DVV        +   ++G V      V 
Sbjct: 1   MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVT 59
Query: 75  GFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 134
           G        N+    D+VII AG+PRKPGMTR+DL   NAGIV+ + + I K   N  + 
Sbjct: 60  GSNDYADTANS----DIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIII 115
Query: 135 LISNPVNSTVPIAAEVFKKAGTYDPK-KLLGVT-MLDVVRANTFVAEXXXXXXXXXXXXX 192
           ++SNP++    +A   + ++G   PK +++G+  +LD  R  +F+A              
Sbjct: 116 VVSNPLDIMTHVA---WVRSGL--PKERVIGMAGVLDAARFRSFIAMELGVSMQDINACV 170
Query: 193 XXXH--AGVTILPLLSQVKPPCS--FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMA 248
              H  A V ++   +    P S     E  + L  R +NGG E+VE     GSA  + A
Sbjct: 171 LGGHGDAMVPVVKYTTVAGIPISDLLPAETIDKLVERTRNGGAEIVE-HLKQGSAFYAPA 229
Query: 249 YAAVKFADA----------CLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEI 298
            + V+  ++          C  GL G  G+           +  F    V+LGR G E+I
Sbjct: 230 SSVVEMVESIVLDRKRVLPCAVGLEGQYGI-----------DKTFVGVPVKLGRNGVEQI 278
Query: 299 FQL 301
           +++
Sbjct: 279 YEI 281

>pdb|3TL2|A Chain A, Crystal Structure Of Bacillus Anthracis Str. Ames Malate Dehydrogenase In Closed Conformation Length = 315

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 115/231 (49%), Gaps = 19/231 (8%)
Query: 90  DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 149
           D+V+I AG+ RKPGM+RDDL   N+ I++++   IAK  PNA + +++NPV++   +   
Sbjct: 80  DVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTNPVDA---MTYS 136
Query: 150 VFKKAGTYDPKKLLGVT-MLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTILPLLSQ- 207
           VFK+AG +  ++++G + +LD  R  TF+A+                H G  ++PL+   
Sbjct: 137 VFKEAG-FPKERVIGQSGVLDTARFRTFIAQELNLSVKDITGFVLGGH-GDDMVPLVRYS 194
Query: 208 ----VKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLR 263
               +       +E  E +  R + GG E+V    G GSA  + A + V+  +A L+  R
Sbjct: 195 YAGGIPLETLIPKERLEAIVERTRKGGGEIV-GLLGNGSAYYAPAASLVEMTEAILKDQR 253
Query: 264 G---DAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYESGL 311
                   +E  +  S +    +    V LG  G E+I +L  L + +  L
Sbjct: 254 RVLPAIAYLEGEYGYSDL----YLGVPVILGGNGIEKIIELELLADEKEAL 300

>pdb|3GVH|A Chain A, Crystal Structure Of LactateMALATE DEHYDROGENASE FROM Brucella Melitensis Length = 324

Iteration: 1
 Score = 81.3 bits (199), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 127/261 (48%), Gaps = 27/261 (10%)
Query: 16  GGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTP-GVTADISHMDTGAVV 73
           G  A  K+A++G+ G IG  LA L  +  L  V+ L+D+   TP G   DI+     + V
Sbjct: 3   GSMARNKIALIGS-GMIGGTLAHLAGLKELGDVV-LFDIAEGTPQGKGLDIAE---SSPV 57
Query: 74  RGFLGQPQLEN---ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPN 130
            GF  +    N   A+ G D+VI+ AGVPRKPGM+RDDL  IN  ++  +  GI K  P 
Sbjct: 58  DGFDAKFTGANDYAAIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPE 117
Query: 131 ATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVRANTFVAEXXXXXXXXXX 189
           A V  I+NP+++ V       +K       K++G+  +LD  R   F++E          
Sbjct: 118 AFVICITNPLDAMV----WALQKFSGLPAHKVVGMAGVLDSARFRYFLSEEFNVSVEDVT 173
Query: 190 XXXXXXHAGVTI----------LPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAG 239
                 H    +          +PL   VK   + +Q++ + +  R ++GG E+V     
Sbjct: 174 VFVLGGHGDSMVPLARYSTVAGIPLPDLVKMGWT-SQDKLDKIIQRTRDGGAEIV-GLLK 231
Query: 240 AGSATLSMAYAAVKFADACLR 260
            GSA  + A +A++ A++ L+
Sbjct: 232 TGSAFYAPAASAIQMAESYLK 252

>pdb|1UXH|A Chain A, Large Improvement In The Thermal Stability Of A Tetrameric Malate Dehydrogenase By Single Point Mutations At The Dimer-Dimer Interface Length = 309

Iteration: 1
 Score = 78.6 bits (192), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 109/230 (47%), Gaps = 16/230 (6%)
Query: 90  DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 149
           D++++ +G PRKPGM+R+DL  +NA I R      A   PNA + +++NP+++   +AAE
Sbjct: 72  DVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPLDAMTYLAAE 131
Query: 150 VFKKAGTYDPKKLLG-VTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTI-LPLLSQ 207
           V      +  ++++G   +LD  R  TF+A                 H    + LP  S 
Sbjct: 132 V----SGFPKERVIGQAGVLDAARYRTFIAMEAGVSVQDVQAMLMGGHGDEMVPLPRFST 187
Query: 208 VK--PPCSFTQ-EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRG 264
           +   P   F   +    +  R + GG E+V      GSA  + A A  +  +A L+  + 
Sbjct: 188 ISGIPVSEFIAPDRLAQIVERTRKGGGEIVNLLK-TGSAYYAPAAATAQMVEAVLKDKKR 246
Query: 265 DAGVVECAFVASQ--VTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLF 312
              V   A++  Q  + ++ +F   V LG  G E+I +L PLNE E  L 
Sbjct: 247 VMPV--AAYLTGQYGLNDI-YFGVPVILGAGGVEKILEL-PLNEEEMALL 292

>pdb|1UXI|A Chain A, Large Improvement In The Thermal Stability Of A Tetrameric Malate Dehydrogenase By Single Point Mutations At The Dimer-Dimer Interface Length = 309

Iteration: 1
 Score = 78.6 bits (192), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 109/230 (47%), Gaps = 16/230 (6%)
Query: 90  DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 149
           D++++ +G PRKPGM+R+DL  +NA I R      A   PNA + +++NP+++   +AAE
Sbjct: 72  DVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPLDAMTYLAAE 131
Query: 150 VFKKAGTYDPKKLLG-VTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTI-LPLLSQ 207
           V      +  ++++G   +LD  R  TF+A                 H    + LP  S 
Sbjct: 132 V----SGFPKERVIGQAGVLDAARYRTFIAMEAGVSVKDVQAMLMGGHGDEMVPLPRFST 187
Query: 208 VK--PPCSFTQ-EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRG 264
           +   P   F   +    +  R + GG E+V      GSA  + A A  +  +A L+  + 
Sbjct: 188 ISGIPVSEFIAPDRLAQIVERTRKGGGEIVNLLK-TGSAYYAPAAATAQMVEAVLKDKKR 246
Query: 265 DAGVVECAFVASQ--VTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLF 312
              V   A++  Q  + ++ +F   V LG  G E+I +L PLNE E  L 
Sbjct: 247 VMPV--AAYLTGQYGLNDI-YFGVPVILGAGGVEKILEL-PLNEEEMALL 292

>pdb|1GUY|A Chain A, Structural Basis For Thermophilic Protein Stability: Structures Of Thermophilic And Mesophilic Malate Dehydrogenases Length = 309

Iteration: 1
 Score = 78.2 bits (191), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 109/230 (47%), Gaps = 16/230 (6%)
Query: 90  DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 149
           D++++ +G PRKPGM+R+DL  +NA I R      A   PNA + +++NP+++   +AAE
Sbjct: 72  DVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPLDAMTYLAAE 131
Query: 150 VFKKAGTYDPKKLLG-VTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTI-LPLLSQ 207
           V      +  ++++G   +LD  R  TF+A                 H    + LP  S 
Sbjct: 132 V----SGFPKERVIGQAGVLDAARYRTFIAMEAGVSVEDVQAMLMGGHGDEMVPLPRFST 187
Query: 208 VK--PPCSFTQ-EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRG 264
           +   P   F   +    +  R + GG E+V      GSA  + A A  +  +A L+  + 
Sbjct: 188 ISGIPVSEFIAPDRLAQIVERTRKGGGEIVNLLK-TGSAYYAPAAATAQMVEAVLKDKKR 246
Query: 265 DAGVVECAFVASQ--VTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLF 312
              V   A++  Q  + ++ +F   V LG  G E+I +L PLNE E  L 
Sbjct: 247 VMPV--AAYLTGQYGLNDI-YFGVPVILGAGGVEKILEL-PLNEEEMALL 292

>pdb|2HJR|A Chain A, Crystal Structure Of Cryptosporidium Parvum Malate Dehydrogenase Length = 328

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/158 (36%), Positives = 89/158 (56%), Gaps = 17/158 (10%)
Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISH----MDTGAVVRG 75
           K++I+GA G IG  +A+L+    L  V +++D++     G   D++H    + + A + G
Sbjct: 16  KISIIGA-GQIGSTIALLLGQKDLGDV-YMFDIIEGVPQGKALDLNHCMALIGSPAKIFG 73
Query: 76  FLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL 135
                 L+N+    D+VII AGVPRKP MTR DL  +NA IV ++ E + K CPNA V  
Sbjct: 74  ENNYEYLQNS----DVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVIC 129
Query: 136 ISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVR 172
           I+NP+++ V      FK+       K+ G++ +LD  R
Sbjct: 130 ITNPLDAMV----YYFKEKSGIPANKVCGMSGVLDSAR 163

>pdb|1UR5|A Chain A, Stabilization Of A Tetrameric Malate Dehydrogenase By Introduction Of A Disulfide Bridge At The DimerDIMER Interface Length = 309

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 109/230 (47%), Gaps = 16/230 (6%)
Query: 90  DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 149
           D++++ +G PRKPGM+R+DL  +NA I R      A   PNA + +++NP+++   +AAE
Sbjct: 72  DVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPLDAMTYLAAE 131
Query: 150 VFKKAGTYDPKKLLG-VTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTI-LPLLSQ 207
           V      +  ++++G   +LD  R  TF+A                 H    + LP  S 
Sbjct: 132 V----SGFPKERVIGQAGVLDAARYRTFIAMEAGVSVEDVQAMLMGGHGDEMVPLPRFSC 187
Query: 208 VK--PPCSFTQ-EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRG 264
           +   P   F   +    +  R + GG E+V      GSA  + A A  +  +A L+  + 
Sbjct: 188 ISGIPVSEFIAPDRLAQIVERTRKGGGEIVNLLK-TGSAYYAPAAATAQMVEAVLKDKKR 246
Query: 265 DAGVVECAFVASQ--VTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLF 312
              V   A++  Q  + ++ +F   V LG  G E+I +L PLNE E  L 
Sbjct: 247 VMPV--AAYLTGQYGLNDI-YFGVPVILGAGGVEKILEL-PLNEEEMALL 292

>pdb|1GV0|A Chain A, Structural Basis For Thermophilic Protein Stability: Structures Of Thermophilic And Mesophilic Malate Dehydrogenases Length = 310

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 134/295 (45%), Gaps = 28/295 (9%)
Query: 21  FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAV------VR 74
            K+ ++GA G +G   A  +    L   L L DVV        +   ++G V      V 
Sbjct: 1   MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVT 59
Query: 75  GFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 134
           G        N+    D+V+I AG+PRKPGMTR+DL ++NAGIVR +   I +   N  + 
Sbjct: 60  GSNDYADTANS----DIVVITAGLPRKPGMTREDLLSMNAGIVREVTGRIMEHSKNPIIV 115
Query: 135 LISNPVNSTVPIAAEVFKKAGTYDPK-KLLGVT-MLDVVRANTFVAEXXXXXXXXXXXXX 192
           ++SNP++    +A   ++K+G   PK +++G+  +LD  R  +F+A              
Sbjct: 116 VVSNPLDIMTHVA---WQKSGL--PKERVIGMAGVLDSARFRSFIAMELGVSMQDVTACV 170
Query: 193 XXXH--AGVTILPLLSQVKPPCS--FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMA 248
              H  A V ++   +    P +   + E    L  R + GG E+V      GSA  S A
Sbjct: 171 LGGHGDAMVPVVKYTTVAGIPVADLISAERIAELVERTRTGGAEIVN-HLKQGSAFYSPA 229
Query: 249 YAAVKFADACLRGLRGDAGVVECA--FVASQVTELPFFASKVRLGRQGAEEIFQL 301
            + V+  ++ +   +    V+ CA         +  F    V+LG+ G E I+++
Sbjct: 230 TSVVEMVESIVLDRK---RVLTCAVSLDGQYGIDGTFVGVPVKLGKNGVEHIYEI 281

>pdb|3OM9|A Chain A, T. Gondii Bradyzoite-Specific Ldh (Ldh1) In Complex With Nad And Oxq Length = 329

Iteration: 1
 Score = 67.8 bits (164), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 107/236 (45%), Gaps = 32/236 (13%)
Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHM----DTGAVVRG 75
           KVA++G+ G IG  +  L  +  L  V+ LYDVV     G   D+SH+    DT   VR 
Sbjct: 9   KVAMIGS-GMIGGTMGYLCALRELADVV-LYDVVKGMPEGKALDLSHVTSVVDTNVSVRA 66
Query: 76  FLGQPQLENALTGMDLVIIPAGVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCCPN 130
              +   E ALTG D VI+ AG+ + PG      +R+DL   N+ I+R + + I K CP 
Sbjct: 67  ---EYSYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPK 123
Query: 131 ATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVRANTFVAEXXXXXXXXXX 189
             + +++NP++  V +  E    A       + G+  MLD  R   +VA+          
Sbjct: 124 TFIIVVTNPLDCMVKVMCE----ASGVPTNMICGMACMLDSGRFRRYVADALSVSPRDVQ 179
Query: 190 XXXXXXHAGVTILPLLSQVK----PPCSF------TQEETEYLTNRIQNGGTEVVE 235
                 H G  ++PL+  +     P   F      T+++ E +    +  G E+V 
Sbjct: 180 ATVIGTH-GDCMVPLVRYITVNGYPIQKFIKDGVVTEKQLEEIAEHTKVSGGEIVR 234

>pdb|3CZM|A Chain A, T. Gondii Bradyzoite-Specific Ldh (Ldh2) In Complex With Nad And Oxq Length = 326

Iteration: 1
 Score = 67.8 bits (164), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 113/257 (43%), Gaps = 26/257 (10%)
Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 79
           K+A++G+ G IG  +  L  +  L  V+ L+DVV     G   D S   + A     +  
Sbjct: 10  KIAMIGS-GMIGGTMGYLCVLRELADVV-LFDVVTGMPEGKALDDSQATSIADTNVSVTS 67
Query: 80  PQLENALTGMDLVIIPAGVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCCPNATVN 134
                 + G D+VII AG+ + PG      +R+DL   NA I+R + +G+ K CP A V 
Sbjct: 68  ANQYEKIAGSDVVIITAGLTKVPGKSDKEWSRNDLLPFNAKIIREVAQGVKKYCPLAFVI 127
Query: 135 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXXX 193
           +++NP++  V    + F +A       + G+  +LD  R   F+A+              
Sbjct: 128 VVTNPLDCMV----KCFHEASGLPKNMVCGMANVLDSARFRRFIADQLEISPRDIQATVI 183
Query: 194 XXHAGVTILPL----------LSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSA 243
             H G  +LPL          L +       T+ +   +  R +  G E+V    G GSA
Sbjct: 184 GTH-GDHMLPLARYVTVNGFPLREFIKKGKMTEAKLAEIVERTKKAGGEIVRL-LGQGSA 241
Query: 244 TLSMAYAAVKFADACLR 260
             + A +A+  A A L+
Sbjct: 242 YYAPALSAITMAQAFLK 258

>pdb|1SOV|A Chain A, Toxoplasma Gondii Bradyzoite-specific Ldh (ldh2) Apo Form Length = 328

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 113/257 (43%), Gaps = 26/257 (10%)
Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 79
           K+A++G+ G IG  +  L  +  L  V+ L+DVV     G   D S   + A     +  
Sbjct: 10  KIAMIGS-GMIGGTMGYLCVLRELADVV-LFDVVTGMPEGKALDDSQATSIADTNVSVTS 67
Query: 80  PQLENALTGMDLVIIPAGVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCCPNATVN 134
                 + G D+VII AG+ + PG      +R+DL   NA I+R + +G+ K CP A V 
Sbjct: 68  ANQYEKIAGSDVVIITAGLTKVPGKSDKEWSRNDLLPFNAKIIREVAQGVKKYCPLAFVI 127
Query: 135 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXXX 193
           +++NP++  V    + F +A       + G+  +LD  R   F+A+              
Sbjct: 128 VVTNPLDCMV----KCFHEASGLPKNMVCGMANVLDSARFRRFIADQLEISPRDIQATVI 183
Query: 194 XXHAGVTILPL----------LSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSA 243
             H G  +LPL          L +       T+ +   +  R +  G E+V    G GSA
Sbjct: 184 GTH-GDHMLPLARYVTVNGFPLREFIKKGKMTEAKLAEIVERTKKAGGEIVRL-LGQGSA 241
Query: 244 TLSMAYAAVKFADACLR 260
             + A +A+  A A L+
Sbjct: 242 YYAPALSAITMAQAFLK 258

>pdb|1PZE|A Chain A, T.gondii Ldh1 Apo Form Length = 331

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 107/236 (45%), Gaps = 32/236 (13%)
Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHM----DTGAVVRG 75
           KVA++G+ G IG  +  L  +  L  V+ LYDVV     G   D+SH+    DT   VR 
Sbjct: 11  KVAMIGS-GMIGGTMGYLCALRELADVV-LYDVVKGMPEGKALDLSHVTSVVDTNVSVRA 68
Query: 76  FLGQPQLENALTGMDLVIIPAGVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCCPN 130
              +   E ALTG D VI+ AG+ + PG      +R+DL   N+ I+R + + I K CP 
Sbjct: 69  ---EYSYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPK 125
Query: 131 ATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVRANTFVAEXXXXXXXXXX 189
             + +++NP++  V +  E    A       + G+  MLD  R   +VA+          
Sbjct: 126 TFIIVVTNPLDCMVKVMCE----ASGVPTNMICGMACMLDSGRFRRYVADALSVSPRDVQ 181
Query: 190 XXXXXXHAGVTILPLLSQVK----PPCSF------TQEETEYLTNRIQNGGTEVVE 235
                 H G  ++PL+  +     P   F      T+++ E +    +  G E+V 
Sbjct: 182 ATVIGTH-GDCMVPLVRYITVNGYPIQKFIKDGVVTEKQLEEIAEHTKVSGGEIVR 236

>pdb|1PZG|A Chain A, T.Gondii Ldh1 Complexed With Apad And Sulfate At 1.6 Angstroms Length = 331

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 107/236 (45%), Gaps = 32/236 (13%)
Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHM----DTGAVVRG 75
           KVA++G+ G IG  +  L  +  L  V+ LYDVV     G   D+SH+    DT   VR 
Sbjct: 11  KVAMIGS-GMIGGTMGYLCALRELADVV-LYDVVKGMPEGKALDLSHVTSVVDTNVSVRA 68
Query: 76  FLGQPQLENALTGMDLVIIPAGVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCCPN 130
              +   E ALTG D VI+ AG+ + PG      +R+DL   N+ I+R + + I K CP 
Sbjct: 69  ---EYSYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPK 125
Query: 131 ATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVRANTFVAEXXXXXXXXXX 189
             + +++NP++  V +  E    A       + G+  MLD  R   +VA+          
Sbjct: 126 TFIIVVTNPLDCMVKVMXE----ASGVPTNMICGMACMLDSGRFRRYVADALSVSPRDVQ 181
Query: 190 XXXXXXHAGVTILPLLSQVK----PPCSF------TQEETEYLTNRIQNGGTEVVE 235
                 H G  ++PL+  +     P   F      T+++ E +    +  G E+V 
Sbjct: 182 ATVIGTH-GDCMVPLVRYITVNGYPIQKFIKDGVVTEKQLEEIAEHTKVSGGEIVR 236

>pdb|1A5Z|A Chain A, Lactate Dehydrogenase From Thermotoga Maritima (tmldh) Length = 319

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 86  LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVP 145
           L G D+VI+ AGVP+KPG TR  L   NA +++ +   ++K  P++ V +++NPV+    
Sbjct: 65  LKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVD---- 120
Query: 146 IAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAE 179
           +    F K    DP+K+ G  T+LD  R  T +A+
Sbjct: 121 VLTYFFLKESGMDPRKVFGSGTVLDTARLRTLIAQ 155

>pdb|1T24|A Chain A, Plasmodium Falciparum Lactate Dehydrogenase Complexed With Nad+ And 4- Hydroxy-1,2,5-Oxadiazole-3-Carboxylic Acid Length = 322

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 140/312 (44%), Gaps = 36/312 (11%)
Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTP-GVTADISHMDTGAVVRGFLGQ 79
           K+ ++G+ G IG  +A L+    L  V+ L+D+V N P G   D SH +  A     +  
Sbjct: 6   KIVLVGS-GMIGGVMATLIVQKNLGDVV-LFDIVKNMPHGKALDTSHTNVMAYSNCKVSG 63
Query: 80  PQLENALTGMDLVIIPAGVPRKPGMT-----RDDLFNINAGIVRTLCEGIAKCCPNATVN 134
               + L G D+VI+ AG  + PG +     RDDL  +N  I+  +   I K CPNA + 
Sbjct: 64  SNTYDDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFII 123
Query: 135 LISNPVNSTVPIAAEVFKKAGTYDPK-KLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXX 192
           +++NPV+  V +   + + +G   PK K++G+  +LD  R   ++++             
Sbjct: 124 VVTNPVDVMVQL---LHQHSGV--PKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNAHI 178
Query: 193 XXXHAGVTIL----------PLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGS 242
              H    +L          PL   +      +  E E + +R  N   E+V   A   S
Sbjct: 179 VGAHGNKMVLLKRYITVGGIPLQEFINNKL-ISDAELEAIFDRTVNTALEIVNLHA---S 234
Query: 243 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQVTELPFF-ASKVRLGRQGAEEIFQ 300
             ++ A A ++ A++ L+ L+    V+ C+  +  Q      F  + V LG  G E++ +
Sbjct: 235 PYVAPAAAIIEMAESYLKDLK---KVLICSTLLEGQYGHSDIFGGTPVVLGANGVEQVIE 291
Query: 301 LGPLNEYESGLF 312
           L  LN  E   F
Sbjct: 292 L-QLNSEEKAKF 302

>pdb|1U4O|A Chain A, Plasmodium Falciparum Lactate Dehydrogenase Complexed With 2,6- Naphthalenedicarboxylic Acid Length = 321

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 140/312 (44%), Gaps = 36/312 (11%)
Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTP-GVTADISHMDTGAVVRGFLGQ 79
           K+ ++G+ G IG  +A L+    L  V+ L+D+V N P G   D SH +  A     +  
Sbjct: 5   KIVLVGS-GMIGGVMATLIVQKNLGDVV-LFDIVKNMPHGKALDTSHTNVMAYSNCKVSG 62
Query: 80  PQLENALTGMDLVIIPAGVPRKPGMT-----RDDLFNINAGIVRTLCEGIAKCCPNATVN 134
               + L G D+VI+ AG  + PG +     RDDL  +N  I+  +   I K CPNA + 
Sbjct: 63  SNTYDDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFII 122
Query: 135 LISNPVNSTVPIAAEVFKKAGTYDPK-KLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXX 192
           +++NPV+  V +   + + +G   PK K++G+  +LD  R   ++++             
Sbjct: 123 VVTNPVDVMVQL---LHQHSGV--PKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNAHI 177
Query: 193 XXXHAGVTIL----------PLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGS 242
              H    +L          PL   +      +  E E + +R  N   E+V   A   S
Sbjct: 178 VGAHGNKMVLLKRYITVGGIPLQEFINNKL-ISDAELEAIFDRTVNTALEIVNLHA---S 233
Query: 243 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQVTELPFF-ASKVRLGRQGAEEIFQ 300
             ++ A A ++ A++ L+ L+    V+ C+  +  Q      F  + V LG  G E++ +
Sbjct: 234 PYVAPAAAIIEMAESYLKDLK---KVLICSTLLEGQYGHSDIFGGTPVVLGANGVEQVIE 290
Query: 301 LGPLNEYESGLF 312
           L  LN  E   F
Sbjct: 291 L-QLNSEEKAKF 301

>pdb|2D4A|A Chain A, Structure Of The Malate Dehydrogenase From Aeropyrum Pernix Length = 308

Iteration: 1
 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 137/306 (44%), Gaps = 35/306 (11%)
Query: 23  VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHM--DTGAVVRGFLGQ 79
           + ILGA G +G   A+++ +     +L +      P G   D++H   + G  +R   G 
Sbjct: 2   ITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIR-ISGS 59
Query: 80  PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 139
              E+ + G D+V++ AG+ RKPGMTR+ L   NA  +  L E I     +A V + +NP
Sbjct: 60  NSYED-MRGSDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTNP 118
Query: 140 VNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVRANTFVAEXXXXXXXXXXXXXXXXHAG 198
           V++   +   ++KK G +  ++++G + +LD  R   ++++                H  
Sbjct: 119 VDAMTYV---MYKKTG-FPRERVIGFSGILDSARMAYYISQKLGVSFKSVNAIVLGMHGQ 174
Query: 199 VTI-LPLLSQV-KPPCS--FTQEETEYLTNRIQNGGTEVVEAKAGAG----SATLSMAYA 250
               +P LS V   P     ++EE E + +   N G ++ E +  +     +A L +   
Sbjct: 175 KMFPVPRLSSVGGVPLEHLMSKEEIEEVVSETVNAGAKITELRGYSSNYGPAAGLVLTVE 234
Query: 251 AVKFADACLR----GLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNE 306
           A+K     +      L+G+ G  +       V E+P       +G+ G E I +L PL E
Sbjct: 235 AIKRDSKRIYPYSLYLQGEYGYNDI------VAEVPAV-----IGKSGIERIIEL-PLTE 282
Query: 307 YESGLF 312
            E   F
Sbjct: 283 DEKRKF 288

>pdb|1XIV|A Chain A, Plasmodium Falciparum Lactate Dehydrogenase Complexed With 2-({4- Chloro-[hydroxy(Methoxy)methyl]cyclohexyl}amino)ethane- 1,1,2-Triol Length = 323

Iteration: 1
 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 140/312 (44%), Gaps = 36/312 (11%)
Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTP-GVTADISHMDTGAVVRGFLGQ 79
           K+ ++G+ G IG  +A L+    L  V+ L+D+V N P G   D SH +  A     +  
Sbjct: 5   KIVLVGS-GMIGGVMATLIVQKNLGDVV-LFDIVKNMPHGKALDTSHTNVMAYSNCKVSG 62
Query: 80  PQLENALTGMDLVIIPAGVPRKPGMT-----RDDLFNINAGIVRTLCEGIAKCCPNATVN 134
               + L G D+VI+ AG  + PG +     RDDL  +N  I+  +   I K CPNA + 
Sbjct: 63  SNTYDDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFII 122
Query: 135 LISNPVNSTVPIAAEVFKKAGTYDPK-KLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXX 192
           +++NPV+  V +   + + +G   PK K++G+  +LD  R   ++++             
Sbjct: 123 VVTNPVDVMVQL---LHQHSGV--PKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNAHI 177
Query: 193 XXXHAGVTIL----------PLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGS 242
              H    +L          PL   +      +  E E + +R  N   E+V   A   S
Sbjct: 178 VGAHGNKMVLLKRYITVGGIPLQEFINNKL-ISDAELEAIFDRTVNTALEIVNLHA---S 233
Query: 243 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQVTELPFF-ASKVRLGRQGAEEIFQ 300
             ++ A A ++ A++ L+ L+    V+ C+  +  Q      F  + V LG  G E++ +
Sbjct: 234 PYVAPAAAIIEMAESYLKDLK---KVLICSTLLEGQYGHSDIFGGTPVVLGANGVEQVIE 290
Query: 301 LGPLNEYESGLF 312
           L  LN  E   F
Sbjct: 291 L-QLNSEEKAKF 301

>pdb|1CEQ|A Chain A, Chloroquine Binds In The Cofactor Binding Site Of Plasmodium Falciparum Lactate Dehydrogenase Length = 316

Iteration: 1
 Score = 64.3 bits (155), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 140/312 (44%), Gaps = 36/312 (11%)
Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTP-GVTADISHMDTGAVVRGFLGQ 79
           K+ ++G+ G IG  +A L+    L  V+ L+D+V N P G   D SH +  A     +  
Sbjct: 6   KIVLVGS-GMIGGVMATLIVQKNLGDVV-LFDIVKNMPHGKALDTSHTNVMAYSNCKVSG 63
Query: 80  PQLENALTGMDLVIIPAGVPRKPGMT-----RDDLFNINAGIVRTLCEGIAKCCPNATVN 134
               + L G D+VI+ AG  + PG +     RDDL  +N  I+  +   I K CPNA + 
Sbjct: 64  SNTYDDLAGSDVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFII 123
Query: 135 LISNPVNSTVPIAAEVFKKAGTYDPK-KLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXX 192
           +++NPV+  V +   + + +G   PK K++G+  +LD  R   ++++             
Sbjct: 124 VVTNPVDVMVQL---LHQHSGV--PKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNAHI 178
Query: 193 XXXHAGVTIL----------PLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGS 242
              H    +L          PL   +      +  E E + +R  N   E+V   A   S
Sbjct: 179 VGAHGNKMVLLKRYITVGGIPLQEFINNKL-ISDAELEAIFDRTVNTALEIVNLHA---S 234
Query: 243 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQVTELPFF-ASKVRLGRQGAEEIFQ 300
             ++ A A ++ A++ L+ L+    V+ C+  +  Q      F  + V LG  G E++ +
Sbjct: 235 PYVAPAAAIIEMAESYLKDLK---KVLICSTLLEGQYGHSDIFGGTPVVLGANGVEQVIE 291
Query: 301 LGPLNEYESGLF 312
           L  LN  E   F
Sbjct: 292 L-QLNSEEKAKF 302

>pdb|3NEP|X Chain X, 1.55a Resolution Structure Of Malate Dehydrogenase From Salinibacter Ruber Length = 314

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 18/220 (8%)
Query: 90  DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 149
           D+ II AG+PR PGM+RDDL   N  IV  + E   +  P++T+ +++NP++    +A E
Sbjct: 71  DVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVANPLDVMTYVAYE 130
Query: 150 VFKKAGTYDPKKLLGVT-MLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTILPL---- 204
               A  +   +++G+  +LD  R  +F+AE                H G T++PL    
Sbjct: 131 ----ASGFPTNRVMGMAGVLDTGRFRSFIAEELDVSVRDVQALLMGGH-GDTMVPLPRYT 185
Query: 205 -LSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLR 263
            +  +  P        E +  R +  G E+V+      SA  +   AA +  +A    L+
Sbjct: 186 TVGGIPVPQLIDDARIEEIVERTKGAGGEIVDLM--GTSAWYAPGAAAAEMTEAI---LK 240
Query: 264 GDAGVVECAFVASQVTELP--FFASKVRLGRQGAEEIFQL 301
            +  ++ CA        L   F    V+LG  G EE+ ++
Sbjct: 241 DNKRILPCAAYCDGEYGLDDLFIGVPVKLGAGGVEEVIEV 280

>pdb|2HLP|A Chain A, Crystal Structure Of The E267r Mutant Of A Halophilic Malate Dehydrogenase In The Apo Form Length = 303

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 123/291 (42%), Gaps = 39/291 (13%)
Query: 56  NTPGVTADISH---MDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNI 112
           +T G  AD +H    D+   VR    Q   E+   G D+V+I AG+PR+PG TR DL   
Sbjct: 40  DTVGQAADTNHGIAYDSNTRVR----QGGYEDT-AGSDVVVITAGIPRQPGQTRIDLAGD 94
Query: 113 NAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVV 171
           NA I+  +   + +   +      SNPV+    +      +AG    ++++G    LD  
Sbjct: 95  NAPIMEDIQSSLDEHNDDYISLTTSNPVD----LLNRHLYEAGDRSREQVIGFGGRLDSA 150
Query: 172 RANTFVAEXXXXXXXXXXXXXXXXHAGVTILPLLSQVKPPCS---FTQEETEYLTNRIQN 228
           R    ++E                H G   +P+ S+V+   +   F+ +E E L   +Q 
Sbjct: 151 RFRYVLSEEFDAPVQNVEGTILGEH-GDAQVPVFSKVRVDGTDPEFSGDEKEQLLGDLQE 209
Query: 229 GGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVT---ELPFFA 285
              +V+E K   G+     A       +A L     D G V  A V  +     E   F 
Sbjct: 210 SAMDVIERK---GATEWGPARGVAHMVEAILH----DTGRVLPASVKLEGEFGHEDTAFG 262
Query: 286 SKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWLGESEERVSWKHSK 336
             VRLG  G EEI +   L++YE           QD + ++ E++S ++ K
Sbjct: 263 VPVRLGSNGVEEIVEW-DLDDYE-----------QDLMADAAEKLSDQYDK 301

>pdb|2J5K|A Chain A, 2.0 A Resolution Structure Of The Wild Type Malate Dehydrogenase From Haloarcula Marismortui (radiation Damage Series) Length = 304

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 123/291 (42%), Gaps = 39/291 (13%)
Query: 56  NTPGVTADISH---MDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNI 112
           +T G  AD +H    D+   VR    Q   E+   G D+V+I AG+PR+PG TR DL   
Sbjct: 41  DTVGQAADTNHGIAYDSNTRVR----QGGYEDT-AGSDVVVITAGIPRQPGQTRIDLAGD 95
Query: 113 NAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVV 171
           NA I+  +   + +   +      SNPV+    +      +AG    ++++G    LD  
Sbjct: 96  NAPIMEDIQSSLDEHNDDYISLTTSNPVD----LLNRHLYEAGDRSREQVIGFGGRLDSA 151
Query: 172 RANTFVAEXXXXXXXXXXXXXXXXHAGVTILPLLSQVKPPCS---FTQEETEYLTNRIQN 228
           R    ++E                H G   +P+ S+V+   +   F+ +E E L   +Q 
Sbjct: 152 RFRYVLSEEFDAPVQNVEGTILGEH-GDAQVPVFSKVRVDGTDPEFSGDEKEQLLGDLQE 210
Query: 229 GGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVT---ELPFFA 285
              +V+E K   G+     A       +A L     D G V  A V  +     E   F 
Sbjct: 211 SAMDVIERK---GATEWGPARGVAHMVEAILH----DTGEVLPASVKLEGEFGHEDTAFG 263
Query: 286 SKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWLGESEERVSWKHSK 336
             VRLG  G EEI +   L++YE           QD + ++ E++S ++ K
Sbjct: 264 VPVRLGSNGVEEIVEW-DLDDYE-----------QDLMADAAEKLSDQYDK 302

>pdb|1HLP|A Chain A, Structural Features Stabilizing Halophilic Malate Dehydrogenase From An Archaebacterium Length = 303

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 123/291 (42%), Gaps = 39/291 (13%)
Query: 56  NTPGVTADISH---MDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNI 112
           +T G  AD +H    D+   VR    Q   E+   G D+V+I AG+PR+PG TR DL   
Sbjct: 40  DTVGQAADTNHGIAYDSNTRVR----QGGYEDT-AGSDVVVITAGIPRQPGQTRIDLAGD 94
Query: 113 NAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVV 171
           NA I+  +   + +   +      SNPV+    +      +AG    ++++G    LD  
Sbjct: 95  NAPIMEDIQSSLDEHNDDYISLTTSNPVD----LLNRHLYEAGDRSREQVIGFGGRLDSA 150
Query: 172 RANTFVAEXXXXXXXXXXXXXXXXHAGVTILPLLSQVKPPCS---FTQEETEYLTNRIQN 228
           R    ++E                H G   +P+ S+V+   +   F+ +E E L   +Q 
Sbjct: 151 RFRYVLSEEFDAPVQNVEGTILGEH-GDAQVPVFSKVRVDGTDPEFSGDEKEQLLGDLQE 209
Query: 229 GGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVT---ELPFFA 285
              +V+E K   G+     A       +A L     D G V  A V  +     E   F 
Sbjct: 210 SAMDVIERK---GATEWGPARGVAHMVEAILH----DTGEVLPASVKLEGEFGHEDTAFG 262
Query: 286 SKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWLGESEERVSWKHSK 336
             VRLG  G EEI +   L++YE           QD + ++ E++S ++ K
Sbjct: 263 VPVRLGSNGVEEIVEW-DLDDYE-----------QDLMADAAEKLSDQYDK 301

>pdb|2EWD|A Chain A, Crystal Structure Of The Lactate Dehydrogenase From Cryptosporidium Parvum Complexed With Substrate (Pyruvic Acid) And Cofactor Analog (3-Acetylpyridine Adenine Dinucleotide). Length = 317

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 85/162 (52%), Gaps = 11/162 (6%)
Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISH-MDTGAVVRGFLG 78
           K+A++G+ G IG  +A ++  + L  V+ L+D+      G   DI+H M         +G
Sbjct: 6   KIAVIGS-GQIGGNIAYIVGKDNLADVV-LFDIAEGIPQGKALDITHSMVMFGSTSKVIG 63
Query: 79  QPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN 138
                + ++G D+VII A +P +P   R +L   NA I+ ++ EG+ K CPNA V  I+N
Sbjct: 64  TDDYAD-ISGSDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITN 122
Query: 139 PVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVRANTFVAE 179
           P++    +    F+K       K+ G+  +LD  R  TF+A+
Sbjct: 123 PLD----VMVSHFQKVSGLPHNKVCGMAGVLDSSRFRTFIAQ 160

>pdb|1HYG|A Chain A, Crystal Structure Of Mj0490 Gene Product, The Family Of LactateMALATE DEHYDROGENASE Length = 313

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 106/234 (45%), Gaps = 20/234 (8%)
Query: 21  FKVAILGAAGGIGQPLAMLMKINPLVSVLHL----YDVVNTPGVTADISHMDTGAVVRGF 76
            KV I+GA+G +G   A+L+   P +  L L    + +    G+  DI     G      
Sbjct: 1   MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDAN 60
Query: 77  LGQPQLEN--ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 134
           +     EN   +   D+VII +GVPRK GM+R DL   NA IV    + IA+ C +  + 
Sbjct: 61  IYVESDENLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIF 119
Query: 135 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXXX 193
           +I+NPV+  +   A V  K   ++  ++ G+ T LD +R    +A+              
Sbjct: 120 VITNPVD-VMTYKALVDSK---FERNQVFGLGTHLDSLRFKVAIAKFFGVHIDEVRTRII 175
Query: 194 XXHAGVTILPLLSQ-------VKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGA 240
             H G +++PLLS        ++    F +   + +   ++  G +++  K G+
Sbjct: 176 GEH-GDSMVPLLSATSIGGIPIQKFERFKELPIDEIIEDVKTKGEQIIRLKGGS 228

>pdb|1Y6J|A Chain A, L-Lactate Dehydrogenase From Clostridium Thermocellum Cth-1135 Length = 318

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 128/313 (40%), Gaps = 43/313 (13%)
Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQ 79
           KVAI+GA G +G   A  M +    + L L DV      G   DI+H         F+GQ
Sbjct: 9   KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHG------LPFMGQ 61
Query: 80  PQLE----NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL 135
             L     + +   D++++ AG  RKPG TR DL   N  I + + + I K   +  + +
Sbjct: 62  MSLYAGDYSDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILV 121
Query: 136 ISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXXXX 194
           +SNPV+    I   + +K       K++G  T+LD +R    ++E               
Sbjct: 122 VSNPVD----IITYMIQKWSGLPVGKVIGSGTVLDSIRFRYLLSEKLGVDVKNVHGYIIG 177
Query: 195 XHAGVTILPLLSQV------------KPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGS 242
            H G + LPL S               P C+FT+E+ + +   ++  G  +++ K   G+
Sbjct: 178 EH-GDSQLPLWSCTHIAGKNINEYIDDPKCNFTEEDKKKIAEDVKTAGATIIKNK---GA 233
Query: 243 ATLSMAYAAVKFADACLRG---LRGDAGVVECAF-VASQVTELPFFASKVRLGRQGAEEI 298
               +A +     +  L+    +R    V+   + +      LP   +      +G +E+
Sbjct: 234 TYYGIAVSINTIVETLLKNQNTIRTVGTVINGMYGIEDVAISLPSIVNS-----EGVQEV 288
Query: 299 FQLGPLNEYESGL 311
            Q     E E  L
Sbjct: 289 LQFNLTPEEEEAL 301

>pdb|2FM3|A Chain A, Crystal Structure Of The Lactate Dehydrogenase From Cryptosporidium Parvum Complexed With Substrate (Pyruvic Acid) And Cofactor (B- Nicotinamide Adenine Dinucleotide) Length = 321

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 85/162 (52%), Gaps = 11/162 (6%)
Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISH-MDTGAVVRGFLG 78
           K+A++G+ G IG  +A ++  + L  V+ L+D+      G   DI+H M         +G
Sbjct: 6   KIAVIGS-GQIGGNIAYIVGKDNLADVV-LFDIAEGIPQGKALDITHSMVMFGSTSKVIG 63
Query: 79  QPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN 138
                + ++G D+VII A +P +P   R +L   NA I+ ++ EG+ K CPNA V  I+N
Sbjct: 64  TNDYAD-ISGSDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITN 122
Query: 139 PVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVRANTFVAE 179
           P++    +    F+K       K+ G+  +LD  R  TF+A+
Sbjct: 123 PLD----VMVSHFQKVSGLPHNKVCGMAGVLDSSRFRTFIAQ 160

>pdb|3FI9|A Chain A, Crystal Structure Of Malate Dehydrogenase From Porphyromonas Gingivalis Length = 343

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 61/130 (46%), Gaps = 15/130 (11%)
Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYD--VVNTPGVTADISHMDTGAVVRGFLG- 78
           K+ I+GAAG IG  +A    +  L   L LYD   V   GV  +I H        GF G 
Sbjct: 10  KLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHC-------GFEGL 62
Query: 79  ----QPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAT-V 133
                  ++ ALT    ++   G PRK GMTR+DL   NA I   L + I   CP+   V
Sbjct: 63  NLTFTSDIKEALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHV 122
Query: 134 NLISNPVNST 143
            +I NP + T
Sbjct: 123 IIIFNPADIT 132

>pdb|2A92|A Chain A, Crystal Structure Of Lactate Dehydrogenase From Plasmodium Vivax: Complex With Nadh Length = 321

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 139/310 (44%), Gaps = 37/310 (11%)
Query: 25  ILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTP-GVTADISHMDTGAVVRGFLGQPQL 82
           +L  +G IG  +A L+    L  V+ ++DVV N P G   D SH +  A     +     
Sbjct: 7   VLVGSGMIGGVMATLIVQKNLGDVV-MFDVVKNMPQGKALDTSHSNVMAYSNCKVTGSNS 65
Query: 83  ENALTGMDLVIIPAGVPRKPGMT-----RDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137
            + L G D+VI+ AG  + PG +     RDDL  +N  I+  +   I   CPNA + +++
Sbjct: 66  YDDLKGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKNLCPNAFIIVVT 125
Query: 138 NPVNSTVPIAAEVFKKAGTYDPK-KLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXXXXX 195
           NPV+  V +   +F+ +G   PK K++G+  +LD  R   ++++                
Sbjct: 126 NPVDVMVQL---LFEHSGV--PKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNALIVGA 180
Query: 196 HAGVTIL----------PLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATL 245
           H    +L          PL   +      T EE E + +R  N   E+V   A   S  +
Sbjct: 181 HGNKMVLLKRYITVGGIPLQEFINNK-KITDEEVEGIFDRTVNTALEIVNLLA---SPYV 236
Query: 246 SMAYAAVKFADACLRGLRGD---AGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLG 302
           + A A ++ A++ L+ ++     + ++E  +  S +    F  + + +G  G E++ +L 
Sbjct: 237 APAAAIIEMAESYLKDIKKVLVCSTLLEGQYGHSNI----FGGTPLVIGGTGVEQVIEL- 291
Query: 303 PLNEYESGLF 312
            LN  E   F
Sbjct: 292 QLNAEEKTKF 301

>pdb|1CET|A Chain A, Chloroquine Binds In The Cofactor Binding Site Of Plasmodium Falciparum Lactate Dehydrogenase. Length = 316

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 139/312 (44%), Gaps = 36/312 (11%)
Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTP-GVTADISHMDTGAVVRGFLGQ 79
           K+ ++G+ G IG  +A L+    L  V+ L+D+V N P G   D SH +  A     +  
Sbjct: 6   KIVLVGS-GMIGGVMATLIVQKNLGDVV-LFDIVKNMPHGKALDTSHTNVMAYSNCKVSG 63
Query: 80  PQLENALTGMDLVIIPAGVPRKPGMT-----RDDLFNINAGIVRTLCEGIAKCCPNATVN 134
               + L G D+VI+ AG  + PG +     R DL  +N  I+  +   I K CPNA + 
Sbjct: 64  SNTYDDLAGSDVVIVTAGFTKAPGKSDKEWNRLDLLPLNNKIMIEIGGHIKKNCPNAFII 123
Query: 135 LISNPVNSTVPIAAEVFKKAGTYDPK-KLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXX 192
           +++NPV+  V +   + + +G   PK K++G+  +LD  R   ++++             
Sbjct: 124 VVTNPVDVMVQL---LHQHSGV--PKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNAHI 178
Query: 193 XXXHAGVTIL----------PLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGS 242
              H    +L          PL   +      +  E E + +R  N   E+V   A   S
Sbjct: 179 VGAHGNKMVLLKRYITVGGIPLQEFINNKL-ISDAELEAIFDRTVNTALEIVNLHA---S 234
Query: 243 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQVTELPFF-ASKVRLGRQGAEEIFQ 300
             ++ A A ++ A++ L+ L+    V+ C+  +  Q      F  + V LG  G E++ +
Sbjct: 235 PYVAPAAAIIEMAESYLKDLK---KVLICSTLLEGQYGHSDIFGGTPVVLGANGVEQVIE 291
Query: 301 LGPLNEYESGLF 312
           L  LN  E   F
Sbjct: 292 L-QLNSEEKAKF 302

>pdb|1OC4|A Chain A, Lactate Dehydrogenase From Plasmodium Berghei Length = 322

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 140/312 (44%), Gaps = 36/312 (11%)
Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTP-GVTADISHMDTGAVVRGFLGQ 79
           K+ ++G+ G IG  +A L+    L  V+ ++D+V N P G   D SH +  A     +  
Sbjct: 6   KIVLVGS-GMIGGVMATLIVQKNLGDVV-MFDIVKNMPHGKALDTSHTNVMAYSNCKVSG 63
Query: 80  PQLENALTGMDLVIIPAGVPRKPGMT-----RDDLFNINAGIVRTLCEGIAKCCPNATVN 134
               + L   D+VI+ AG  + PG +     RDDL  +N  I+  +   I   CPNA + 
Sbjct: 64  SNTYDDLKDADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKNNCPNAFII 123
Query: 135 LISNPVNSTVPIAAEVFKKAGTYDPK-KLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXX 192
           +++NPV+  V +   + + +G   PK K++G+  +LD  R   ++++             
Sbjct: 124 VVTNPVDVMVQL---LHQHSGV--PKNKIVGLGGVLDTSRLKYYISQKLNVCPRDVNAHI 178
Query: 193 XXXHAGVTIL----------PLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGS 242
              H    +L          PL   +      T +E + + +R  N   E+V   A   S
Sbjct: 179 VGAHGNKMVLLKRYITVGGIPLQEFINNK-KITDQELDAIFDRTINTALEIVNLHA---S 234
Query: 243 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQVTELPFFA-SKVRLGRQGAEEIFQ 300
             ++ A A ++ A++ +R LR    V+ C+  +  Q      FA + + +G  G E++ +
Sbjct: 235 PYVAPAAAIIEMAESYIRDLR---KVLICSTLLEGQYGHKDIFAGTPLVIGGNGVEQVIE 291
Query: 301 LGPLNEYESGLF 312
           L  LN  E   F
Sbjct: 292 L-QLNADEKKKF 302

>pdb|2X0R|A Chain A, R207s,R292s Mutant Of Malate Dehydrogenase From The Halophilic Archaeon Haloarcula Marismortui (Holo Form) Length = 304

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 121/291 (41%), Gaps = 39/291 (13%)
Query: 56  NTPGVTADISH---MDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNI 112
           +T G  AD +H    D+   VR    Q   E+   G D+V+I AG+PR+PG TR DL   
Sbjct: 41  DTVGQAADTNHGIAYDSNTRVR----QGGYEDT-AGSDVVVITAGIPRQPGQTRIDLAGD 95
Query: 113 NAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVV 171
           NA I+  +   + +   +      SNPV+    +      +AG    ++++G    LD  
Sbjct: 96  NAPIMEDIQSSLDEHNDDYISLTTSNPVD----LLNRHLYEAGDRSREQVIGFGGRLDSA 151
Query: 172 RANTFVAEXXXXXXXXXXXXXXXXHAGVTILPLLSQVKPPCS---FTQEETEYLTNRIQN 228
           R    ++E                H G   +P+ S+V    +   F+ +E E L   +Q 
Sbjct: 152 RFRYVLSEEFDAPVQNVEGTILGEH-GDAQVPVFSKVSVDGTDPEFSGDEKEQLLGDLQE 210
Query: 229 GGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVT---ELPFFA 285
              +V+E K   G+     A       +A L     D G V  A V  +     E   F 
Sbjct: 211 SAMDVIERK---GATEWGPARGVAHMVEAILH----DTGEVLPASVKLEGEFGHEDTAFG 263
Query: 286 SKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWLGESEERVSWKHSK 336
             V LG  G EEI +   L++YE           QD + ++ E++S ++ K
Sbjct: 264 VPVSLGSNGVEEIVEW-DLDDYE-----------QDLMADAAEKLSDQYDK 302

>pdb|1O6Z|A Chain A, 1.95 A Resolution Structure Of (r207s,r292s) Mutant Of Malate Dehydrogenase From The Halophilic Archaeon Haloarcula Marismortui (holo Form) Length = 303

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 121/291 (41%), Gaps = 39/291 (13%)
Query: 56  NTPGVTADISH---MDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNI 112
           +T G  AD +H    D+   VR    Q   E+   G D+V+I AG+PR+PG TR DL   
Sbjct: 40  DTVGQAADTNHGIAYDSNTRVR----QGGYEDT-AGSDVVVITAGIPRQPGQTRIDLAGD 94
Query: 113 NAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVV 171
           NA I+  +   + +   +      SNPV+    +      +AG    ++++G    LD  
Sbjct: 95  NAPIMEDIQSSLDEHNDDYISLTTSNPVD----LLNRHLYEAGDRSREQVIGFGGRLDSA 150
Query: 172 RANTFVAEXXXXXXXXXXXXXXXXHAGVTILPLLSQVKPPCS---FTQEETEYLTNRIQN 228
           R    ++E                H G   +P+ S+V    +   F+ +E E L   +Q 
Sbjct: 151 RFRYVLSEEFDAPVQNVEGTILGEH-GDAQVPVFSKVSVDGTDPEFSGDEKEQLLGDLQE 209
Query: 229 GGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVT---ELPFFA 285
              +V+E K   G+     A       +A L     D G V  A V  +     E   F 
Sbjct: 210 SAMDVIERK---GATEWGPARGVAHMVEAILH----DTGEVLPASVKLEGEFGHEDTAFG 262
Query: 286 SKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWLGESEERVSWKHSK 336
             V LG  G EEI +   L++YE           QD + ++ E++S ++ K
Sbjct: 263 VPVSLGSNGVEEIVEW-DLDDYE-----------QDLMADAAEKLSDQYDK 301

>pdb|1T2E|A Chain A, Plasmodium Falciparum Lactate Dehydrogenase S245a, A327p Mutant Complexed With Nadh And Oxamate Length = 322

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 140/312 (44%), Gaps = 36/312 (11%)
Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTP-GVTADISHMDTGAVVRGFLGQ 79
           K+ ++G+ G IG  +A L+    L  V+ L+D+V N P G   D SH +  A     +  
Sbjct: 6   KIVLVGS-GMIGGVMATLIVQKNLGDVV-LFDIVKNMPHGKALDTSHTNVMAYSNCKVSG 63
Query: 80  PQLENALTGMDLVIIPAGVPRKPGMT-----RDDLFNINAGIVRTLCEGIAKCCPNATVN 134
               + L G D+VI+ AG  + PG +     RDDL  +N  I+  +   I K CPNA + 
Sbjct: 64  SNTYDDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFII 123
Query: 135 LISNPVNSTVPIAAEVFKKAGTYDPK-KLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXX 192
           +++NPV+  V +   + + +G   PK K++G+  +LD  R   ++++             
Sbjct: 124 VVTNPVDVMVQL---LHQHSGV--PKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNAHI 178
Query: 193 XXXHAGVTIL----------PLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGS 242
              H    +L          PL   +      +  E E + +R  N   E+V   A   +
Sbjct: 179 VGAHGNKMVLLKRYITVGGIPLQEFINNKL-ISDAELEAIFDRTVNTALEIVNLHA---A 234
Query: 243 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQVTELPFF-ASKVRLGRQGAEEIFQ 300
             ++ A A ++ A++ L+ L+    V+ C+  +  Q      F  + V LG  G E++ +
Sbjct: 235 PYVAPAAAIIEMAESYLKDLK---KVLICSTLLEGQYGHSDIFGGTPVVLGANGVEQVIE 291
Query: 301 LGPLNEYESGLF 312
           L  LN  E   F
Sbjct: 292 L-QLNSEEKAKF 302

>pdb|2X0I|A Chain A, 2.9 A Resolution Structure Of Malate Dehydrogenase From Archaeoglobus Fulgidus In Complex With Nadh Length = 294

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 16/147 (10%)
Query: 29  AGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQL-----E 83
           AG +G   A    +N  V  + L D+     V      MD      G    P++      
Sbjct: 8   AGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVG---EAMDLAHAAAGIDKYPKIVGGADY 64
Query: 84  NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNST 143
           + L G +++++ AG+ RKPGMTR DL + NAGI++ + + I +  P + + +++NP++  
Sbjct: 65  SLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPMDVM 124
Query: 144 VPIA--------AEVFKKAGTYDPKKL 162
             I          EVF      D ++L
Sbjct: 125 TYIMWKESGKPRNEVFGMGNQLDSQRL 151

>pdb|4H7P|A Chain A, Crystal Structure Of A Putative Cytosolic Malate Dehydrogenase From Leishmania Major Friedlin Length = 345

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 33/191 (17%)
Query: 9   QAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD 68
           +A+ +  G  +  KVA+ GAAG IG  L  L+    L+           P    ++  +D
Sbjct: 13  EAQTQGPGSMSAVKVAVTGAAGQIGYALVPLIARGALLG----------PTTPVELRLLD 62
Query: 69  TGAVVRGFLG-QPQLEN-----------------ALTGMDLVIIPAGVPRKPGMTRDDLF 110
               ++   G + +LE+                 A  G+ + I+    PRK GM R DL 
Sbjct: 63  IEPALKALAGVEAELEDCAFPLLDKVVVTADPRVAFDGVAIAIMCGAFPRKAGMERKDLL 122
Query: 111 NINAGIVRTLCEGIAK-CCPNATVNLISNPVNSTVPIAAEVFKKA-GTYDPKKLLGVTML 168
            +NA I +   E IA     +  V ++ NP N+   I   + K A G  +P+ +  +T L
Sbjct: 123 EMNARIFKEQGEAIAAVAASDCRVVVVGNPANTNALI---LLKSAQGKLNPRHVTAMTRL 179
Query: 169 DVVRANTFVAE 179
           D  RA + +A 
Sbjct: 180 DHNRALSLLAR 190

>pdb|1BMD|A Chain A, Determinants Of Protein Thermostability Observed In The 1.9 Angstroms Crystal Structure Of Malate Dehydrogenase From The Thermophilic Bacterium Thermus Flavus Length = 327

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 73/173 (42%), Gaps = 18/173 (10%)
Query: 19  AGFKVAILGAAGGIGQPL-------AMLMKINPLVSVLHLYDVVNT----PGVTADISHM 67
           A  +VA+ GAAG IG  L        ML K  P+  +L L ++        GV  ++   
Sbjct: 3   APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPV--ILQLLEIPQAMKALEGVVMELEDC 60
Query: 68  DTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC 127
               ++ G       + A    D  ++    PRK GM R DL  +N  I       +A+ 
Sbjct: 61  -AFPLLAGLEATDDPDVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEV 119
Query: 128 C-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAE 179
              +  V ++ NP N+   IA   +K A   +P+    +T LD  RA   +A+
Sbjct: 120 AKKDVKVLVVGNPANTNALIA---YKNAPGLNPRNFTAMTRLDHNRAKAQLAK 169

>pdb|3D0O|A Chain A, Crystal Structure Of Lactate Dehydrogenase From Staphylococcus Aureus Length = 317

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 71/325 (21%), Positives = 133/325 (40%), Gaps = 31/325 (9%)
Query: 20  GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD-----TGAVVR 74
           G KV ++G  G +G   A  +    +V  L + D+ +T  V  D+  +      +   VR
Sbjct: 6   GNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDL-DTEKVRGDVMDLKHATPYSPTTVR 63
Query: 75  GFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 134
              G+    +     DLV+I AG  +KPG TR DL + N  I +++   +     +    
Sbjct: 64  VKAGE---YSDCHDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFL 120
Query: 135 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXX 194
           + +NPV+    +A   +K +G    + +   T+LD  R    ++E               
Sbjct: 121 VATNPVD---ILAYATWKFSGLPKERVIGSGTILDSARFRLLLSEAFDVAPRSVDAQIIG 177
Query: 195 XHAGVTILPLLSQV----KPPCSFTQE------ETEYLTNRIQNGGTEVVEAKAGAGSAT 244
            H G T LP+ S      +P  +  ++      + E +  + ++   ++++AK   G+  
Sbjct: 178 EH-GDTELPVWSHANIAGQPLKTLLEQRPEGKAQIEQIFVQTRDAAYDIIQAK---GATY 233
Query: 245 LSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELP-FFASKVRLGRQGAEEIFQLGP 303
             +A    +  +A  R    DA +   A +  +  E   +      + R G   + ++ P
Sbjct: 234 YGVAMGLARITEAIFRN--EDAVLTVSALLEGEYEEEDVYIGVPAVINRNGIRNVVEI-P 290
Query: 304 LNEYESGLFCLLHLCFQDWLGESEE 328
           LN+ E   F       +D + E+EE
Sbjct: 291 LNDEEQSKFAHSAKTLKDIMAEAEE 315

>pdb|2V6B|A Chain A, Crystal Structure Of Lactate Dehydrogenase From Deinococcus Radiodurans (Apo Form) Length = 304

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 86  LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVP 145
           L    +VI+ AG  +KPG +R DL   NA I R L   I +  P+A + + SNPV+    
Sbjct: 65  LADAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVDLLTD 124
Query: 146 IAAEV 150
           +A ++
Sbjct: 125 LATQL 129

>pdb|1BDM|A Chain A, The Structure At 1.8 Angstroms Resolution Of A Single Site Mutant (T189i) Of Malate Dehydrogenase From Thermus Flavus With Increased Enzymatic Activity Length = 327

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 73/173 (42%), Gaps = 18/173 (10%)
Query: 19  AGFKVAILGAAGGIGQPL-------AMLMKINPLVSVLHLYDVVNT----PGVTADISHM 67
           A  +VA+ GAAG IG  L        ML K  P+  +L L ++        GV  ++   
Sbjct: 3   APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPV--ILQLLEIPQAMKALEGVVMELEDC 60
Query: 68  DTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC 127
               ++ G       + A    D  ++    PRK GM R DL  +N  I       +A+ 
Sbjct: 61  -AFPLLAGLEATDDPDVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEV 119
Query: 128 C-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAE 179
              +  V ++ NP N+   IA   +K A   +P+    +T LD  RA   +A+
Sbjct: 120 AKKDVKVLVVGNPANTNALIA---YKNAPGLNPRNFTAMTRLDHNRAKAQLAK 169

>pdb|3H3J|A Chain A, Crystal Structure Of Lactate Dehydrogenase Mutant (A85r) Fro Staphylococcus Aureus Complexed With Nad And Pyruvate Length = 317

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 71/325 (21%), Positives = 133/325 (40%), Gaps = 31/325 (9%)
Query: 20  GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD-----TGAVVR 74
           G KV ++G  G +G   A  +    +V  L + D+ +T  V  D+  +      +   VR
Sbjct: 6   GNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDL-DTEKVRGDVMDLKHATPYSPTTVR 63
Query: 75  GFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 134
              G+    +     DLV+I AG  +KPG TR DL + N  I +++   +     +    
Sbjct: 64  VKAGE---YSDCHDADLVVICAGARQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFL 120
Query: 135 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXX 194
           + +NPV+    +A   +K +G    + +   T+LD  R    ++E               
Sbjct: 121 VATNPVD---ILAYATWKFSGLPKERVIGSGTILDSARFRLLLSEAFDVAPRSVDAQIIG 177
Query: 195 XHAGVTILPLLSQV----KPPCSFTQE------ETEYLTNRIQNGGTEVVEAKAGAGSAT 244
            H G T LP+ S      +P  +  ++      + E +  + ++   ++++AK   G+  
Sbjct: 178 EH-GDTELPVWSHANIAGQPLKTLLEQRPEGKAQIEQIFVQTRDAAYDIIQAK---GATY 233
Query: 245 LSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELP-FFASKVRLGRQGAEEIFQLGP 303
             +A    +  +A  R    DA +   A +  +  E   +      + R G   + ++ P
Sbjct: 234 YGVAMGLARITEAIFRN--EDAVLTVSALLEGEYEEEDVYIGVPAVINRNGIRNVVEI-P 290
Query: 304 LNEYESGLFCLLHLCFQDWLGESEE 328
           LN+ E   F       +D + E+EE
Sbjct: 291 LNDEEQSKFAHSAKTLKDIMAEAEE 315

>pdb|1IZ9|A Chain A, Crystal Structure Of Malate Dehydrogenase From Thermus Thermophilus Hb8 Length = 327

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 73/173 (42%), Gaps = 18/173 (10%)
Query: 19  AGFKVAILGAAGGIGQPL-------AMLMKINPLVSVLHLYDVVNT----PGVTADISHM 67
           A  +VA+ GAAG IG  L        ML K  P+  +L L ++        GV  ++   
Sbjct: 3   APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPV--ILQLLEIPQAMKALEGVVMELEDC 60
Query: 68  DTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC 127
               ++ G       + A    D  ++    PRK GM R DL  +N  I       +A+ 
Sbjct: 61  -AFPLLAGLEATDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEV 119
Query: 128 C-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAE 179
              +  V ++ NP N+   IA   +K A   +P+    +T LD  RA   +A+
Sbjct: 120 AKKDVKVLVVGNPANTNALIA---YKNAPGLNPRNFTAMTRLDHNRAKAQLAK 169

>pdb|1LLD|A Chain A, Molecular Basis Of Allosteric Activation Of Bacterial L-Lactate Dehydrogenase Length = 319

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 90  DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 149
           D+V+I AG  +KPG +R +L      I++ +   + K  PNA   LI+NPV+    IA  
Sbjct: 77  DMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVD----IATH 132
Query: 150 VFKKAGTYDPKKLLGV-TMLDVVRANTFVAE 179
           V +K       ++ G  T LD  R    +A+
Sbjct: 133 VAQKLTGLPENQIFGSGTNLDSARLRFLIAQ 163

>pdb|2ZQY|A Chain A, T-State Structure Of Allosteric L-Lactate Dehydrogenase From Lactobacillus Casei Length = 326

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 94/245 (38%), Gaps = 23/245 (9%)
Query: 90  DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 149
           DLV+I AG P+KPG TR DL N N  I++++ + I     N    + +NPV+    I   
Sbjct: 78  DLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVD----ILTY 133
Query: 150 VFKKAGTYDPKKLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTILPLLSQV 208
              K   +   +++G  T LD  R    +AE                H G T  P+ S  
Sbjct: 134 ATWKLSGFPKNRVVGSGTSLDTARFRQSIAEMVNVDARSVHAYIMGEH-GDTEFPVWSHA 192
Query: 209 K----PPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRG 264
                    + +   E   +++     +V +A           AY  +K   A   G+  
Sbjct: 193 NIGGVTIAEWVKAHPEIKEDKLVKMFEDVRDA-----------AYEIIKLKGATFYGIAT 241
Query: 265 DAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWLG 324
               +  A +  +   LP   S    G+ G  +I+   P     +G+  +L +   D   
Sbjct: 242 ALARISKAILNDENAVLPL--SVYMDGQYGLNDIYIGTPAVINRNGIQNILEIPLTDHEE 299
Query: 325 ESEER 329
           ES ++
Sbjct: 300 ESMQK 304

>pdb|1I10|A Chain A, Human Muscle L-Lactate Dehydrogenase M Chain, Ternary Complex With Nadh And Oxamate Length = 331

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 14/136 (10%)
Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQ 79
           K+ ++G  G +G   A+ + +  L   L L DV+     G   D+ H   G++   FL  
Sbjct: 21  KITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQH---GSL---FLRT 73
Query: 80  PQL-----ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 134
           P++      N      LVII AG  ++ G +R +L   N  I + +   + K  PN  + 
Sbjct: 74  PKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPNCKLL 133
Query: 135 LISNPVNSTVPIAAEV 150
           ++SNPV+    +A ++
Sbjct: 134 IVSNPVDILTYVAWKI 149

>pdb|4AJP|A Chain A, Human Ldha In Complex With 2-((4-(4-((3-((2-Methyl-1,3- Benzothiazol-6yl)amino)-3-Oxo-Propyl)amino)-4-Oxo-Butyl) Phenyl)methyl)propanedioic Acid Length = 337

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 14/136 (10%)
Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQ 79
           K+ ++G  G +G   A+ + +  L   L L DV+     G   D+ H   G++   FL  
Sbjct: 21  KITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQH---GSL---FLRT 73
Query: 80  PQL-----ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 134
           P++      N      LVII AG  ++ G +R +L   N  I + +   + K  PN  + 
Sbjct: 74  PKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPNCKLL 133
Query: 135 LISNPVNSTVPIAAEV 150
           ++SNPV+    +A ++
Sbjct: 134 IVSNPVDILTYVAWKI 149

>pdb|1LDB|A Chain A, Structure Determination And Refinement Of Bacillus Stearothermophilus Lactate Dehydrogenase Length = 317

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 94/245 (38%), Gaps = 42/245 (17%)
Query: 90  DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 149
           DLV+I AG  +KPG TR DL + N  I R++ E +          + +NPV+    +   
Sbjct: 76  DLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPVD---ILTYA 132
Query: 150 VFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTILPLLSQ-- 207
            +K +G    + +   T+LD  R    + E                H G T LP+ SQ  
Sbjct: 133 TWKFSGLPHERVIGSGTILDTARFRFLLGEYFSVAPQNVHAYIIGEH-GDTELPVWSQAY 191
Query: 208 ---------VKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFA--- 255
                    V+      Q++ E +   +++   +++E K GA    ++M  A V  A   
Sbjct: 192 IGVMPIRKLVESKGEEAQKDLERIFVNVRDAAYQIIE-KKGATYYGIAMGLARVTRAILH 250
Query: 256 --------DACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEY 307
                    A L GL G+  V              +      + R G  E+ ++  LN+ 
Sbjct: 251 NENAILTVSAYLDGLYGERDV--------------YIGVPAVINRNGIREVIEI-ELNDD 295
Query: 308 ESGLF 312
           E   F
Sbjct: 296 EKNRF 300

>pdb|1LDN|A Chain A, Structure Of A Ternary Complex Of An Allosteric Lactate Dehydrogenase From Bacillus Stearothermophilus At 2.5 Angstroms Resolution Length = 316

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 94/245 (38%), Gaps = 42/245 (17%)
Query: 90  DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 149
           DLV+I AG  +KPG TR DL + N  I R++ E +          + +NPV+    +   
Sbjct: 76  DLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPVD---ILTYA 132
Query: 150 VFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTILPLLSQ-- 207
            +K +G    + +   T+LD  R    + E                H G T LP+ SQ  
Sbjct: 133 TWKFSGLPHERVIGSGTILDTARFRFLLGEYFSVAPQNVHAYIIGEH-GDTELPVWSQAY 191
Query: 208 ---------VKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFA--- 255
                    V+      Q++ E +   +++   +++E K GA    ++M  A V  A   
Sbjct: 192 IGVMPIRKLVESKGEEAQKDLERIFVNVRDAAYQIIE-KKGATYYGIAMGLARVTRAILH 250
Query: 256 --------DACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEY 307
                    A L GL G+  V              +      + R G  E+ ++  LN+ 
Sbjct: 251 NENAILTVSAYLDGLYGERDV--------------YIGVPAVINRNGIREVIEI-ELNDD 295
Query: 308 ESGLF 312
           E   F
Sbjct: 296 EKNRF 300

>pdb|2LDX|A Chain A, Characterization Of The Antigenic Sites On The Refined 3- Angstroms Resolution Structure Of Mouse Testicular Lactate Dehydrogenase C4 Length = 331

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 68/309 (22%), Positives = 121/309 (39%), Gaps = 32/309 (10%)
Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 81
           K+ ++G  G +G   A+ + +  L   L L D  +T  +  +   +  G++   FL  P+
Sbjct: 21  KITVVGV-GDVGMACAISILLKGLADELALVDA-DTDKLRGEALDLQHGSL---FLSTPK 75
Query: 82  L-----ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 136
           +      N      LVII AG     G TR DL   N  I++ +  G+ +  P+  + ++
Sbjct: 76  IVFGKDYNVSANSKLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVV 135
Query: 137 SNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXXXXX 195
           +NPV+    I   V  K   +   +++G    LD  R    + E                
Sbjct: 136 TNPVD----ILTYVVWKISGFPVGRVIGSGCNLDSARFRYLIGEKLGVNPTSCHGWVLGE 191
Query: 196 HAGVTILPLLSQVK---------PPCSFTQEETEYLTN---RIQNGGTEVVEAKAGAGSA 243
           H G + +P+ S V           P   T +  ++  N   ++  GG EV++ K   G  
Sbjct: 192 H-GDSSVPIWSGVNVAGVTLKSLNPAIGTDKNKQHWKNVHKQVVEGGYEVLDMK---GYT 247
Query: 244 TLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGP 303
           + ++  +    A + L+ L+    V         + E  F +    LG  G  +  ++  
Sbjct: 248 SWAIGLSVTDLARSILKNLKRVHPVTTLVKGFHGIKEEVFLSIPCVLGESGITDFVKVNM 307
Query: 304 LNEYESGLF 312
             E E GL 
Sbjct: 308 TAE-EEGLL 315

>pdb|1WZE|A Chain A, Structural Basis For Alteration Of Cofactor Specificity Of Malate Dehydrogenase From Thermus Flavus Length = 327

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 14/171 (8%)
Query: 19  AGFKVAILGAAGGIGQPL-------AMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGA 71
           A  +VA+ GAAG IG  L        ML K  P++  L L    +   +   +  ++  A
Sbjct: 3   APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQL-LGSERSFQALEGVVMELEDCA 61
Query: 72  --VVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC- 128
             ++ G       + A    D  ++    PRK GM R DL  +N  I       +A+   
Sbjct: 62  FPLLAGLEATDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAK 121
Query: 129 PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAE 179
            +  V ++ NP N+   IA   +K A   +P+    +T LD  RA   +A+
Sbjct: 122 KDVKVLVVGNPANTNALIA---YKNAPGLNPRNFTAMTRLDHNRAKAQLAK 169

>pdb|3VKU|A Chain A, Penta Mutant Of Lactobacillus Casei Lactate Dehydrogenase Length = 326

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 90  DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 141
           DLV+I AG P+KPG TR DL N N  I++++ + I     N    + +NPV+
Sbjct: 78  DLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVD 129

>pdb|1LLC|A Chain A, Structure Determination Of The Allosteric L-Lactate Dehydrogenase From Lactobacillus Casei At 3.0 Angstroms Resolution Length = 325

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 53/233 (22%), Positives = 98/233 (42%), Gaps = 26/233 (11%)
Query: 90  DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 149
           DLV+I AG P++PG TR DL N N  I++++ + I     N    + +NPV+    I   
Sbjct: 77  DLVVITAGAPKQPGETRLDLVNKNLKILKSIVDPIVDSGFNLIFLVAANPVD----ILTY 132
Query: 150 VFKKAGTYDPKKLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTILPLLSQ- 207
              K   +   +++G  T LD  R    +AE                H G T  P+ S  
Sbjct: 133 ATWKLSGFPKNRVVGSGTSLDTARFRQSIAEMVNVDARSVHAYIMGEH-GDTEFPVWSHA 191
Query: 208 ----------VKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADA 257
                     VK      +++   +   +++   E+++ K   G+    +A A  + + A
Sbjct: 192 NIGGVTIAEWVKAHPEIKEDKLVKMFEDVRDAAYEIIKLK---GATFYGIATALARISKA 248
Query: 258 CLRGLRGDAGVVECAFVASQ--VTELPFFASKVRLGRQGAEEIFQLGPLNEYE 308
            L     +A +    ++  Q  + +L +  +   + R G + I ++ PL ++E
Sbjct: 249 ILND--ENAVLPLSVYMDGQYGINDL-YIGTPAVINRNGIQNILEI-PLTDHE 297

>pdb|2E37|A Chain A, Structure Of Tt0471 Protein From Thermus Thermophilus Length = 310

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 86  LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVP 145
           L G   V++ AGV ++PG TR  L + NA +   +   + +  P A + + +NPV+    
Sbjct: 65  LEGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPVDVXTQ 124
Query: 146 IAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAE 179
           +A   ++ +G   P +++G  T+LD  R    +AE
Sbjct: 125 VA---YRLSGL-PPGRVVGSGTILDTARFRALLAE 155

>pdb|4A73|A Chain A, Single Point Mutant Of Thermus Thermophilus Lactate Dehydrogenase Length = 310

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 86  LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVP 145
           L G   V++ AGV ++PG TR  L + NA +   +   + +  P A + + +NPV+    
Sbjct: 65  LEGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPVDVMTQ 124
Query: 146 IAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAE 179
           +A   ++ +G   P +++G  T+LD  R    +AE
Sbjct: 125 VA---YRLSG-LPPGRVVGSGTILDTARFRALLAE 155

>pdb|2V6M|A Chain A, Crystal Structure Of Lactate Dehydrogenase From Thermus Thermophilus Hb8 (Apo Form) Length = 310

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 86  LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVP 145
           L G   V++ AGV ++PG TR  L + NA +   +   + +  P A + + +NPV+    
Sbjct: 65  LEGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPVDVMTQ 124
Query: 146 IAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAE 179
           +A   ++ +G   P +++G  T+LD  R    +AE
Sbjct: 125 VA---YRLSG-LPPGRVVGSGTILDTARFRALLAE 155

>pdb|3H3F|A Chain A, Rabbit Muscle L-Lactate Dehydrogenase In Complex With Nadh And Oxamate Length = 331

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/314 (21%), Positives = 128/314 (40%), Gaps = 43/314 (13%)
Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQ 79
           K+ ++G  G +G   A+ + +  L   L L DV+     G   D+ H   G++   FL  
Sbjct: 21  KITVVGV-GAVGMACAISILMKDLADELALVDVMEDKLKGEMMDLQH---GSL---FLRT 73
Query: 80  PQLENALTGMD--------LVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNA 131
           P++   ++G D        LVII AG  ++ G +R +L   N  I + +   + K  P+ 
Sbjct: 74  PKI---VSGKDYSVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPHC 130
Query: 132 TVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEXXXXXXXXXXX 190
            + ++SNPV+    I   V  K   +   +++G    LD  R    + E           
Sbjct: 131 KLLVVSNPVD----ILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHALSCHG 186
Query: 191 XXXXXH-------------AGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAK 237
                H             AGV++  L  ++       +E+ + +  ++ +   EV++ K
Sbjct: 187 WILGEHGDSSVPVWSGMNVAGVSLKTLHPELGTDAD--KEQWKQVHKQVVDSAYEVIKLK 244
Query: 238 AGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEE 297
              G  T ++  +    A++ ++ LR    +         + E  F +    LG+ G  +
Sbjct: 245 ---GYTTWAIGLSVADLAESIMKNLRRVHPISTMLKGLYGIKEDVFLSVPCVLGQNGISD 301
Query: 298 IFQLGPLNEYESGL 311
           + ++   +E E+ L
Sbjct: 302 VVKVTLTSEEEAHL 315

>pdb|2XXB|A Chain A, Penta-Mutant Of Thermus Thermophilus Lactate Dehydrogenase, Complex With Amp Length = 310

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 86  LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVP 145
           L G   V++ AGV ++PG TR  L + NA +   +   + +  P A + + +NPV+    
Sbjct: 65  LEGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPVDVMTQ 124
Query: 146 IAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAE 179
           +A   +  +G   P +++G  T+LD  R    +AE
Sbjct: 125 VA---YALSG-LPPGRVVGSGTILDTARFRALLAE 155

>pdb|9LDT|A Chain A, Design And Synthesis Of New Enzymes Based On The Lactate Dehydrogenase Framework Length = 332

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 14/136 (10%)
Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQ 79
           K+ ++G  G +G   A+ + +  L   + L DV+     G   D+ H   G++   FL  
Sbjct: 22  KITVVGV-GAVGMACAISILMKELADEIALVDVMEDKLKGEMMDLQH---GSL---FLRT 74
Query: 80  PQL-----ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 134
           P++      N      LV+I AG  ++ G +R +L   N  I + +   I K  PN  + 
Sbjct: 75  PKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKYSPNCKLL 134
Query: 135 LISNPVNSTVPIAAEV 150
           ++SNPV+    +A ++
Sbjct: 135 VVSNPVDILTYVAWKI 150

>pdb|3PQD|A Chain A, Crystal Structure Of L-Lactate Dehydrogenase From Bacillus Subtilis Complexed With Fbp And Nad+ Length = 326

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/247 (23%), Positives = 101/247 (40%), Gaps = 26/247 (10%)
Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 81
           KVA++GA G +G   A  +    +   L + DV N      D+  ++ G   + F  QP 
Sbjct: 7   KVALIGA-GFVGSSYAFALINQGITDELVVIDV-NKEKAMGDVMDLNHG---KAFAPQPV 61
Query: 82  LENALT-----GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 136
             +  T       D+V I AG  +KPG TR +L   N  I + +   +     +    + 
Sbjct: 62  KTSYGTYEDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVA 121
Query: 137 SNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXH 196
           +NPV+    +    +K +G    + +   T LD  R    ++E                H
Sbjct: 122 TNPVD---ILTYATWKFSGLPKERVIGSGTTLDSARFRFMLSEYFGAAPQNVHAHIIGEH 178
Query: 197 AGVTILPLLSQ-----------VKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATL 245
            G T LP+ S            V+   ++ QEE + + + ++N    ++E K GA    +
Sbjct: 179 -GDTELPVWSHANVGGVPVSELVEKNDAYKQEELDQIVDDVKNAAYHIIE-KKGATYYGV 236
Query: 246 SMAYAAV 252
           +M+ A +
Sbjct: 237 AMSLARI 243

>pdb|1CIV|A Chain A, Chloroplast Nadp-Dependent Malate Dehydrogenase From Flaveria Bidentis Length = 385

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 99  PRKPGMTRDDLFNINAGIVRTLCEGI-AKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY 157
           PR PGM R DL +IN  I     + + A   PN  V ++ NP N+   I     K A   
Sbjct: 129 PRGPGMERADLLDINGQIFAEQGKALNAVASPNVKVMVVGNPCNTNALIC---LKNAPNI 185
Query: 158 DPKKLLGVTMLDVVRA 173
            PK    +T LD  RA
Sbjct: 186 PPKNFHALTRLDENRA 201

>pdb|3PQE|A Chain A, Crystal Structure Of L-Lactate Dehydrogenase From Bacillus Subtilis With H171c Mutation Length = 326

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 58/247 (23%), Positives = 101/247 (40%), Gaps = 26/247 (10%)
Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 81
           KVA++GA G +G   A  +    +   L + DV N      D+  ++ G   + F  QP 
Sbjct: 7   KVALIGA-GFVGSSYAFALINQGITDELVVIDV-NKEKAMGDVMDLNHG---KAFAPQPV 61
Query: 82  LENALT-----GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 136
             +  T       D+V I AG  +KPG TR +L   N  I + +   +     +    + 
Sbjct: 62  KTSYGTYEDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVA 121
Query: 137 SNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXH 196
           +NPV+    +    +K +G    + +   T LD  R    ++E                H
Sbjct: 122 TNPVD---ILTYATWKFSGLPKERVIGSGTTLDSARFRFMLSEYFGAAPQNVCAHIIGEH 178
Query: 197 AGVTILPLLSQ-----------VKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATL 245
            G T LP+ S            V+   ++ QEE + + + ++N    ++E K GA    +
Sbjct: 179 -GDTELPVWSHANVGGVPVSELVEKNDAYKQEELDQIVDDVKNAAYHIIE-KKGATYYGV 236
Query: 246 SMAYAAV 252
           +M+ A +
Sbjct: 237 AMSLARI 243

>pdb|4AJ1|A Chain A, Rat Ldha In Complex With N-(2-(Methylamino)-1,3- Benzothiazol-6-Yl)acetamide Length = 331

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 14/136 (10%)
Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQ 79
           K+ ++G  G +G   A+ + +  L   L L DV+     G   D+ H   G++   FL  
Sbjct: 21  KITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQH---GSL---FLKT 73
Query: 80  PQLENA-----LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 134
           P++ ++          LVII AG  ++ G +R +L   N  I + +   + K  P   + 
Sbjct: 74  PKIVSSKDYSVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLL 133
Query: 135 LISNPVNSTVPIAAEV 150
           ++SNPV+    +A ++
Sbjct: 134 IVSNPVDILTYVAWKI 149

>pdb|4AJ4|A Chain A, Rat Ldha In Complex With 4-((2-Allylsulfanyl-1,3-Benzothizol-6-Yl) Amino)-4-Oxo-Butanoic Acid Length = 332

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 14/136 (10%)
Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQ 79
           K+ ++G  G +G   A+ + +  L   L L DV+     G   D+ H   G++   FL  
Sbjct: 22  KITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQH---GSL---FLKT 74
Query: 80  PQLENA-----LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 134
           P++ ++          LVII AG  ++ G +R +L   N  I + +   + K  P   + 
Sbjct: 75  PKIVSSKDYSVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLL 134
Query: 135 LISNPVNSTVPIAAEV 150
           ++SNPV+    +A ++
Sbjct: 135 IVSNPVDILTYVAWKI 150

>pdb|6LDH|A Chain A, Refined Crystal Structure Of Dogfish M4 Apo-Lactate Dehydrogenase Length = 330

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 12/135 (8%)
Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISH----MDTGAVVRG 75
           K+ ++G  G +G   A+ + +  L   + L DV+     G   D+ H    + T  +V G
Sbjct: 23  KITVVGV-GAVGMACAISILMKDLADEVALVDVMEDKLKGEMMDLQHGSLFLHTAKIVSG 81
Query: 76  FLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL 135
                +  +   G  LV+I AG  ++ G +R +L   N  I + +   I K  P+  + +
Sbjct: 82  -----KDYSVSAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCIILV 136
Query: 136 ISNPVNSTVPIAAEV 150
           +SNPV+    +A ++
Sbjct: 137 VSNPVDVLTYVAWKL 151

>pdb|1LDM|A Chain A, Refined Crystal Structure Of Dogfish M4 Apo-Lactate Dehydrogenase Length = 329

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 12/135 (8%)
Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISH----MDTGAVVRG 75
           K+ ++G  G +G   A+ + +  L   + L DV+     G   D+ H    + T  +V G
Sbjct: 22  KITVVGV-GAVGMACAISILMKDLADEVALVDVMEDKLKGEMMDLQHGSLFLHTAKIVSG 80
Query: 76  FLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL 135
                +  +   G  LV+I AG  ++ G +R +L   N  I + +   I K  P+  + +
Sbjct: 81  -----KDYSVSAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCIILV 135
Query: 136 ISNPVNSTVPIAAEV 150
           +SNPV+    +A ++
Sbjct: 136 VSNPVDVLTYVAWKL 150

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	369
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	1e-177
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	1e-171
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	1e-164
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	3e-50
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	2e-43
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	1e-41
3tl2_A	315	Malate dehydrogenase; center for structural genomi	2e-41
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	4e-41
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	9e-41
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	1e-40
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	2e-40
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	3e-40
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	7e-40
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	4e-39
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	5e-39
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	9e-39
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	1e-37
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	2e-37
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	4e-37
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	5e-37
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	8e-37
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	1e-36
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	1e-36
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	1e-36
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	2e-36
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	2e-36
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	5e-36
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	1e-34
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	1e-34
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	1e-33
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	3e-33
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	5e-33
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	6e-33
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	1e-32
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	1e-31
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	2e-31
1obb_A	480	Maltase, alpha-glucosidase; glycosidase, sulfinic	4e-08
3fef_A	450	Putative glucosidase LPLD; gulosidase, structural	2e-07
1u8x_X	472	Maltose-6'-phosphate glucosidase; structural genom	4e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-06
1s6y_A	450	6-phospho-beta-glucosidase; hydrolase, structural	1e-05

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A Length = 326

 Score =  493 bits (1272), Expect = e-177
 Identities = 273/300 (91%), Positives = 283/300 (94%)

Query: 13  RAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAV 72
           RAKGGA GFKVAILGAAGGIGQPLAMLMK+NPLVSVLHLYDVVN PGVTADISHMDTGAV
Sbjct: 1   RAKGGAPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAV 60

Query: 73  VRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAT 132
           VRGFLGQ QLE ALTGMDL+I+PAGVPRKPGMTRDDLF INAGIV+TLCEGIAKCCP A 
Sbjct: 61  VRGFLGQQQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAI 120

Query: 133 VNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPV 192
           VNLISNPVNSTVPIAAEVFKKAGTYDPK+LLGVTMLDVVRANTFVAEVLGLDPRDVDVPV
Sbjct: 121 VNLISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPRDVDVPV 180

Query: 193 VGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAV 252
           VGGHAGVTILPLLSQVKPP SFTQEE  YLT+RIQNGGTEVVEAKAGAGSATLSMAYAAV
Sbjct: 181 VGGHAGVTILPLLSQVKPPSSFTQEEISYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAV 240

Query: 253 KFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLF 312
           KFADACLRGLRGDAGV+ECAFV+SQVTELPFFASKVRLGR G EE++ LGPLNEYE    
Sbjct: 241 KFADACLRGLRGDAGVIECAFVSSQVTELPFFASKVRLGRNGIEEVYSLGPLNEYERIGL 300

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* Length = 314

 Score =  477 bits (1231), Expect = e-171
 Identities = 171/291 (58%), Positives = 220/291 (75%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 81
           KVA+LGA+GGIGQPL++L+K +PLVS L LYD+ +TPGV AD+SH++T A V+G+LG  Q
Sbjct: 2   KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQ 61

Query: 82  LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 141
           L + L G D+V+IPAGVPRKPGMTRDDLFN NA IV TL    A+ CP+A + +ISNPVN
Sbjct: 62  LPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPVN 121

Query: 142 STVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTI 201
           ST+PI AEVFKK G Y+P K+ GVT LD+VRAN FVAE+ GLDP  V VPV+GGHAG TI
Sbjct: 122 STIPITAEVFKKHGVYNPNKIFGVTTLDIVRANAFVAELKGLDPARVSVPVIGGHAGKTI 181

Query: 202 LPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRG 261
           +PL+SQ  P   F Q++   LT RIQ  GTEVV+AKAGAGSATLSMAYA  +F  + +  
Sbjct: 182 IPLISQCTPKVDFPQDQLSTLTGRIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLVDA 241

Query: 262 LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLF 312
           + G  GVVEC+FV SQ T+ P+F++ + LG++G E+   +G ++ +E  + 
Sbjct: 242 MNGKEGVVECSFVKSQETDCPYFSTPLLLGKKGIEKNLGIGKISPFEEKMI 292

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* Length = 312

 Score =  462 bits (1190), Expect = e-164
 Identities = 166/293 (56%), Positives = 206/293 (70%), Gaps = 4/293 (1%)

Query: 22  KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQ 79
           KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G 
Sbjct: 2   KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSG- 60

Query: 80  PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 139
                AL G D+V+I AGV RKPGM R DLFN+NAGIV+ L + +AK CP A + +I+NP
Sbjct: 61  EDATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNP 120

Query: 140 VNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGV 199
           VN+TV IAAEV KKAG YD  KL GVT LD++R+NTFVAE+ G  P +V+VPV+GGH+GV
Sbjct: 121 VNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGV 180

Query: 200 TILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACL 259
           TILPLLSQV P  SFT++E   LT RIQN GTEVVEAKAG GSATLSM  AA +F  + +
Sbjct: 181 TILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLV 239

Query: 260 RGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLF 312
           R L+G+ GVVECA+V        FF+  + LG+ G EE   +G L+ +E    
Sbjct: 240 RALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNAL 292

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} Length = 343

 Score =  170 bits (434), Expect = 3e-50
 Identities = 74/305 (24%), Positives = 117/305 (38%), Gaps = 25/305 (8%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTP-GVTADISHMDTGAVVRGFLGQ 79
           K+ I+GAAG IG  +A    +  L   L LYD       GV  +I     G         
Sbjct: 10  KLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEI--RHCGFEGLNLTFT 67

Query: 80  PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAT-VNLISN 138
             ++ ALT    ++   G PRK GMTR+DL   NA I   L + I   CP+   V +I N
Sbjct: 68  SDIKEALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFN 127

Query: 139 PVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHA 197
           P + T  +       +G   P ++  +  LD  R  + +A+  G+    V      GGH 
Sbjct: 128 PADITGLVT---LIYSG-LKPSQVTTLAGLDSTRLQSELAKHFGIKQSLVTNTRTYGGH- 182

Query: 198 GVTILPL----------LSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSM 247
           G  +             L+ +      T E+   L  R+  GG  +++ +    S+  S 
Sbjct: 183 GEQMAVFASTAKVNGTPLTDLIGTDKLTNEQWAELKQRVVKGGANIIKLR--GRSSFQSP 240

Query: 248 AYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEY 307
           +Y +++   A + G           +V     E    A +  + + G +        NE 
Sbjct: 241 SYVSIEMIRAAMGGEAFR--WPAGCYVNVPGFEHIMMAMETTITKDGVKHSDINQLGNEA 298

Query: 308 ESGLF 312
           E    
Sbjct: 299 ERAAL 303

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A Length = 303

 Score =  151 bits (385), Expect = 2e-43
 Identities = 75/314 (23%), Positives = 127/314 (40%), Gaps = 50/314 (15%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVT----ADISHMDTGAVVRGFL 77
           KV+++GAAG +G      + +  +   +   D+ +    T    AD +H         + 
Sbjct: 2   KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHG------IAYD 55

Query: 78  GQPQLE----NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATV 133
              ++         G D+V+I AG+PR+PG TR DL   NA I+  +   + +   +   
Sbjct: 56  SNTRVRQGGYEDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYIS 115

Query: 134 NLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPV 192
              SNPV+    +      +AG    ++++G    LD  R    ++E      ++V+  +
Sbjct: 116 LTTSNPVD----LLNRHLYEAGDRSREQVIGFGGRLDSARFRYVLSEEFDAPVQNVEGTI 171

Query: 193 VGGHAGVTILPLLSQV----KPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMA 248
           +G H G   +P+ S+V      P  F+ +E E L   +Q    +V+E K   G+     A
Sbjct: 172 LGEH-GDAQVPVFSKVSVDGTDP-EFSGDEKEQLLGDLQESAMDVIERK---GATEWGPA 226

Query: 249 YAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEI 298
                  +A L            L G+ G  +             F   V LG  G EEI
Sbjct: 227 RGVAHMVEAILHDTGEVLPASVKLEGEFGHEDT-----------AFGVPVSLGSNGVEEI 275

Query: 299 FQLGPLNEYESGLF 312
            +   L++YE  L 
Sbjct: 276 VEW-DLDDYEQDLM 288

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* Length = 313

 Score =  147 bits (373), Expect = 1e-41
 Identities = 72/318 (22%), Positives = 132/318 (41%), Gaps = 50/318 (15%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN----TPGVTADISHMDTGAVVRGF- 76
           KV I+GA+G +G   A+L+   P +  L L    +      G+  DI             
Sbjct: 2   KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYD---ALAGTRSD 58

Query: 77  ----LGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAT 132
               +   +    +   D+VII +GVPRK GM+R DL   NA IV    + IA+ C    
Sbjct: 59  ANIYVESDENLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEICDTK- 117

Query: 133 VNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVP 191
           + +I+NPV+    +          ++  ++ G+ T LD +R    +A+  G+   +V   
Sbjct: 118 IFVITNPVD----VMTYKALVDSKFERNQVFGLGTHLDSLRFKVAIAKFFGVHIDEVRTR 173

Query: 192 VVGGHAGVTILPLLSQ-------VKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSAT 244
           ++G H G +++PLLS        ++    F +   + +   ++  G +++  K   G + 
Sbjct: 174 IIGEH-GDSMVPLLSATSIGGIPIQKFERFKELPIDEIIEDVKTKGEQIIRLK---GGSE 229

Query: 245 LSMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQG 294
              A A +      +            + G+   +    +      +P     V++GR G
Sbjct: 230 FGPAAAILNVVRCIVNNEKRLLTLSAYVDGEFDGIRDVCIG-----VP-----VKIGRDG 279

Query: 295 AEEIFQLGPLNEYESGLF 312
            EE+  +  L++ E   F
Sbjct: 280 IEEVVSI-ELDKDEIIAF 296

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} Length = 315

 Score =  146 bits (371), Expect = 2e-41
 Identities = 88/314 (28%), Positives = 141/314 (44%), Gaps = 46/314 (14%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA----DISHMDTGAVVRGFL 77
           KV+++GA G  G   A L+    L  V+ L D+      T     D+      + V+GF 
Sbjct: 10  KVSVIGA-GFTGATTAFLLAQKELADVV-LVDIPQLENPTKGKALDMLE---ASPVQGFD 64

Query: 78  GQPQLEN---ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 134
                 +        D+V+I AG+ RKPGM+RDDL   N+ I++++   IAK  PNA + 
Sbjct: 65  ANIIGTSDYADTADSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIV 124

Query: 135 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVV 193
           +++NPV+           K   +  ++++G   +LD  R  TF+A+ L L  +D+   V+
Sbjct: 125 VLTNPVD----AMTYSVFKEAGFPKERVIGQSGVLDTARFRTFIAQELNLSVKDITGFVL 180

Query: 194 GGHAGVTILPLLSQV----KPPCSF-TQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMA 248
           GGH G  ++PL+        P  +   +E  E +  R + GG E+V    G GSA  + A
Sbjct: 181 GGH-GDDMVPLVRYSYAGGIPLETLIPKERLEAIVERTRKGGGEIVG-LLGNGSAYYAPA 238

Query: 249 YAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEI 298
            + V+  +A L+           L G+ G  +            +    V LG  G E+I
Sbjct: 239 ASLVEMTEAILKDQRRVLPAIAYLEGEYGYSDL-----------YLGVPVILGGNGIEKI 287

Query: 299 FQLGPLNEYESGLF 312
            +L  L   E    
Sbjct: 288 IEL-ELLADEKEAL 300

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} Length = 314

 Score =  145 bits (369), Expect = 4e-41
 Identities = 78/312 (25%), Positives = 136/312 (43%), Gaps = 44/312 (14%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 79
           KV ++GA G +G  +A  +    +   + + D+ +    G   D+      + + GF  +
Sbjct: 2   KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRE---SSPIHGFDTR 57

Query: 80  PQLEN---ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 136
               N        D+ II AG+PR PGM+RDDL   N  IV  + E   +  P++T+ ++
Sbjct: 58  VTGTNDYGPTEDSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVV 117

Query: 137 SNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGG 195
           +NP++    +   V  +A  +   +++G+  +LD  R  +F+AE L +  RDV   ++GG
Sbjct: 118 ANPLD----VMTYVAYEASGFPTNRVMGMAGVLDTGRFRSFIAEELDVSVRDVQALLMGG 173

Query: 196 HAGVTILPLLSQV----KPPCSF-TQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYA 250
           H G T++PL         P          E +  R +  G E+V+      SA  +   A
Sbjct: 174 H-GDTMVPLPRYTTVGGIPVPQLIDDARIEEIVERTKGAGGEIVDLM--GTSAWYAPGAA 230

Query: 251 AVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQ 300
           A +  +A L+             G+ G+ +            F    V+LG  G EE+ +
Sbjct: 231 AAEMTEAILKDNKRILPCAAYCDGEYGLDDL-----------FIGVPVKLGAGGVEEVIE 279

Query: 301 LGPLNEYESGLF 312
           +  L+  E    
Sbjct: 280 V-DLDADEKAQL 290

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* Length = 310

 Score =  144 bits (367), Expect = 9e-41
 Identities = 89/312 (28%), Positives = 144/312 (46%), Gaps = 43/312 (13%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 79
           K+ ++GA G +G   A  +    L   L L DVV     G   D+        V  F  +
Sbjct: 2   KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYE---SGPVGLFDTK 57

Query: 80  PQLEN---ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 136
               N        D+VII AG+PRKPGMTR+DL   NAGIV+ + + I K   N  + ++
Sbjct: 58  VTGSNDYADTANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVV 117

Query: 137 SNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGG 195
           SNP++    I   V         ++++G+  +LD  R  +F+A  LG+  +D++  V+GG
Sbjct: 118 SNPLD----IMTHVAWVRSGLPKERVIGMAGVLDAARFRSFIAMELGVSMQDINACVLGG 173

Query: 196 HAGVTILPLLSQV----KPPCSF-TQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYA 250
           H G  ++P++        P       E  + L  R +NGG E+VE     GSA  + A +
Sbjct: 174 H-GDAMVPVVKYTTVAGIPISDLLPAETIDKLVERTRNGGAEIVEH-LKQGSAFYAPASS 231

Query: 251 AVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQ 300
            V+  ++ +            L G  G+ +          +P     V+LGR G E+I++
Sbjct: 232 VVEMVESIVLDRKRVLPCAVGLEGQYGIDKTFV------GVP-----VKLGRNGVEQIYE 280

Query: 301 LGPLNEYESGLF 312
           +  L++ +  L 
Sbjct: 281 I-NLDQADLDLL 291

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* Length = 309

 Score =  144 bits (366), Expect = 1e-40
 Identities = 85/312 (27%), Positives = 138/312 (44%), Gaps = 44/312 (14%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 79
           K++I+GA G +G   A  +    L  ++ L D+V     G   D+      + + GF  +
Sbjct: 4   KISIIGA-GFVGSTTAHWLAAKELGDIV-LLDIVEGVPQGKALDLYE---ASPIEGFDVR 58

Query: 80  PQLEN---ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 136
               N        D++++ +G PRKPGM+R+DL  +NA I R      A   PNA + ++
Sbjct: 59  VTGTNNYADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMV 118

Query: 137 SNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGG 195
           +NP++        +  +   +  ++++G   +LD  R  TF+A   G+   DV   ++GG
Sbjct: 119 NNPLD----AMTYLAAEVSGFPKERVIGQAGVLDAARYRTFIAMEAGVSVEDVQAMLMGG 174

Query: 196 HAGVTILPLLSQV----KPPCSF-TQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYA 250
           H G  ++PL         P   F   +    +  R + GG E+V      GSA  + A A
Sbjct: 175 H-GDEMVPLPRFSCISGIPVSEFIAPDRLAQIVERTRKGGGEIVNLL-KTGSAYYAPAAA 232

Query: 251 AVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQ 300
             +  +A L+           L G  G+ +  F       +P     V LG  G E+I +
Sbjct: 233 TAQMVEAVLKDKKRVMPVAAYLTGQYGLNDIYF------GVP-----VILGAGGVEKILE 281

Query: 301 LGPLNEYESGLF 312
           L PLNE E  L 
Sbjct: 282 L-PLNEEEMALL 292

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix} Length = 308

 Score =  144 bits (365), Expect = 2e-40
 Identities = 77/314 (24%), Positives = 131/314 (41%), Gaps = 51/314 (16%)

Query: 23  VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQP 80
           + ILGA G +G   A+++ +     +L L         G   D++H    A   G   + 
Sbjct: 2   ITILGA-GKVGMATAVMLMMRGYDDLL-LIARTPGKPQGEALDLAH---AAAELGVDIRI 56

Query: 81  QLEN---ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137
              N    + G D+V++ AG+ RKPGMTR+ L   NA  +  L E I     +A V + +
Sbjct: 57  SGSNSYEDMRGSDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITT 116

Query: 138 NPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGGH 196
           NPV+        V  K   +  ++++G   +LD  R   ++++ LG+  + V+  V+G H
Sbjct: 117 NPVD----AMTYVMYKKTGFPRERVIGFSGILDSARMAYYISQKLGVSFKSVNAIVLGMH 172

Query: 197 AGVTILPLLSQV----KPPCSF-TQEETEYLTNRIQNGGTEVVEAKAGA-----GSATLS 246
            G  + P+         P     ++EE E + +   N G ++ E +  +      +  + 
Sbjct: 173 -GQKMFPVPRLSSVGGVPLEHLMSKEEIEEVVSETVNAGAKITELRGYSSNYGPAAGLVL 231

Query: 247 MAYAAVKFAD--------ACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEI 298
              A  +  D          L+G  G   +         V E+P       +G+ G E I
Sbjct: 232 TVEAIKR--DSKRIYPYSLYLQGEYGYNDI---------VAEVP-----AVIGKSGIERI 275

Query: 299 FQLGPLNEYESGLF 312
            +L PL E E   F
Sbjct: 276 IEL-PLTEDEKRKF 288

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} Length = 328

 Score =  143 bits (364), Expect = 3e-40
 Identities = 98/317 (30%), Positives = 143/317 (45%), Gaps = 49/317 (15%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 79
           K++I+GA G IG  +A+L+    L  V  ++D++     G   D++H      + G   +
Sbjct: 16  KISIIGA-GQIGSTIALLLGQKDLGDVY-MFDIIEGVPQGKALDLNH---CMALIGSPAK 70

Query: 80  PQLEN---ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 136
              EN    L   D+VII AGVPRKP MTR DL  +NA IV ++ E + K CPNA V  I
Sbjct: 71  IFGENNYEYLQNSDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICI 130

Query: 137 SNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGG 195
           +NP++         FK+       K+ G+  +LD  R    ++  LG+ P DV   VVGG
Sbjct: 131 TNPLD----AMVYYFKEKSGIPANKVCGMSGVLDSARFRCNLSRALGVKPSDVSAIVVGG 186

Query: 196 HAGVTILPL----------LSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATL 245
           H G  ++PL          LS        T  +   +  +   GG E+VE     GSA  
Sbjct: 187 H-GDEMIPLTSSVTIGGILLSDFVEQGKITHSQINEIIKKTAFGGGEIVELL-KTGSAFY 244

Query: 246 SMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQGA 295
           + A +AV  A A L+           L G   V              F    V +G+ G 
Sbjct: 245 APAASAVAMAQAYLKDSKSVLVCSTYLTGQYNVNNL-----------FVGVPVVIGKNGI 293

Query: 296 EEIFQLGPLNEYESGLF 312
           E++  +  L++ E  LF
Sbjct: 294 EDVVIV-NLSDDEKSLF 309

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A Length = 317

 Score =  142 bits (361), Expect = 7e-40
 Identities = 88/317 (27%), Positives = 142/317 (44%), Gaps = 49/317 (15%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 79
           K+A++G+ G IG  +A ++  + L  V+ L+D+      G   DI+H     V+ G   +
Sbjct: 6   KIAVIGS-GQIGGNIAYIVGKDNLADVV-LFDIAEGIPQGKALDITH---SMVMFGSTSK 60

Query: 80  PQLEN---ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 136
               +    ++G D+VII A +P +P   R +L   NA I+ ++ EG+ K CPNA V  I
Sbjct: 61  VIGTDDYADISGSDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICI 120

Query: 137 SNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGG 195
           +NP++    +    F+K       K+ G+  +LD  R  TF+A+  G++  DV   V+GG
Sbjct: 121 TNPLD----VMVSHFQKVSGLPHNKVCGMAGVLDSSRFRTFIAQHFGVNASDVSANVIGG 176

Query: 196 HAGVTILPL----------LSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATL 245
           H G  ++P           LS        TQE+ + +    +    EV +     G+A  
Sbjct: 177 H-GDGMVPATSSVSVGGVPLSSFIKQGLITQEQIDEIVCHTRIAWKEVADNL-KTGTAYF 234

Query: 246 SMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQGA 295
           + A AAVK A+A L+                GV            +P       +G+ G 
Sbjct: 235 APAAAAVKMAEAYLKDKKAVVPCSAFCSNHYGVKGIYM------GVP-----TIIGKNGV 283

Query: 296 EEIFQLGPLNEYESGLF 312
           E+I +L  L   E  L 
Sbjct: 284 EDILEL-DLTPLEQKLL 299

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* Length = 324

 Score =  140 bits (356), Expect = 4e-39
 Identities = 93/317 (29%), Positives = 149/317 (47%), Gaps = 49/317 (15%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 79
           K+A++G+ G IG  LA L  +  L  V+ L+D+      G   DI+     + V GF  +
Sbjct: 9   KIALIGS-GMIGGTLAHLAGLKELGDVV-LFDIAEGTPQGKGLDIAE---SSPVDGFDAK 63

Query: 80  PQLEN---ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 136
               N   A+ G D+VI+ AGVPRKPGM+RDDL  IN  ++  +  GI K  P A V  I
Sbjct: 64  FTGANDYAAIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICI 123

Query: 137 SNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGG 195
           +NP++          +K       K++G+  +LD  R   F++E   +   DV V V+GG
Sbjct: 124 TNPLD----AMVWALQKFSGLPAHKVVGMAGVLDSARFRYFLSEEFNVSVEDVTVFVLGG 179

Query: 196 HAGVTILPL----------LSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATL 245
           H G +++PL          L  +      +Q++ + +  R ++GG E+V      GSA  
Sbjct: 180 H-GDSMVPLARYSTVAGIPLPDLVKMGWTSQDKLDKIIQRTRDGGAEIVGLL-KTGSAFY 237

Query: 246 SMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQGA 295
           + A +A++ A++ L+           L G  GV +          +P       +G  G 
Sbjct: 238 APAASAIQMAESYLKDKKRVLPVAAQLSGQYGVKDMYV------GVP-----TVIGANGV 286

Query: 296 EEIFQLGPLNEYESGLF 312
           E I ++  L++ E   F
Sbjct: 287 ERIIEI-DLDKDEKAQF 302

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* Length = 331

 Score =  140 bits (356), Expect = 5e-39
 Identities = 90/323 (27%), Positives = 140/323 (43%), Gaps = 55/323 (17%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF--- 76
           KVA++G+ G IG  +  L  +  L  V+ LYDVV     G   D+SH      V      
Sbjct: 11  KVAMIGS-GMIGGTMGYLCALRELADVV-LYDVVKGMPEGKALDLSH---VTSVVDTNVS 65

Query: 77  -LGQPQLENALTGMDLVIIPAGVPRKPGM-----TRDDLFNINAGIVRTLCEGIAKCCPN 130
              +   E ALTG D VI+ AG+ + PG      +R+DL   N+ I+R + + I K CP 
Sbjct: 66  VRAEYSYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPK 125

Query: 131 ATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVD 189
             + +++NP++       +V  +A       + G+  MLD  R   +VA+ L + PRDV 
Sbjct: 126 TFIIVVTNPLD----CMVKVMCEASGVPTNMICGMACMLDSGRFRRYVADALSVSPRDVQ 181

Query: 190 VPVVGGHAGVTILPLLSQVK----------PPCSFTQEETEYLTNRIQNGGTEVVEAKAG 239
             V+G H G  ++PL+  +                T+++ E +    +  G E+V    G
Sbjct: 182 ATVIGTH-GDCMVPLVRYITVNGYPIQKFIKDGVVTEKQLEEIAEHTKVSGGEIVRFL-G 239

Query: 240 AGSATLSMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVR 289
            GSA  + A +AV  A + L              G+ G+ +            F      
Sbjct: 240 QGSAYYAPAASAVAMATSFLNDEKRVIPCSVYCNGEYGLKDM-----------FIGLPAV 288

Query: 290 LGRQGAEEIFQLGPLNEYESGLF 312
           +G  G E + +L  LNE E   F
Sbjct: 289 IGGAGIERVIEL-ELNEEEKKQF 310

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} Length = 321

 Score =  139 bits (353), Expect = 9e-39
 Identities = 94/318 (29%), Positives = 149/318 (46%), Gaps = 50/318 (15%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 79
           K+ ++GA G IG  LA L  I  L  V+ L+D+      G   D+        + G   +
Sbjct: 7   KITLVGA-GNIGGTLAHLALIKQLGDVV-LFDIAQGMPNGKALDLLQ---TCPIEGVDFK 61

Query: 80  PQLEN---ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 136
            +  N    L   D+VI+ AGVPRKPGM+RDDL  IN  +++T+ EGI   CPNA V  I
Sbjct: 62  VRGTNDYKDLENSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICI 121

Query: 137 SNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGG 195
           +NP++    I   + +K       K++G+  +LD  R  TF+A+ L +  + V   V+GG
Sbjct: 122 TNPLD----IMVNMLQKFSGVPDNKIVGMAGVLDSARFRTFLADELNVSVQQVQAYVMGG 177

Query: 196 HAGVTILPL----------LSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATL 245
           H G T++PL          L Q+       QE  + + +R ++GG E+V      GSA  
Sbjct: 178 H-GDTMVPLTKMSNVAGVSLEQLVKEGKLKQERLDAIVSRTRSGGGEIVALL-KTGSAYY 235

Query: 246 SMAYAAVKFADACLRGLR-----------GDAGVVECAFVASQVTELPFFASKVRLGRQG 294
           + A A ++ A++ L+  +           G  G+ E  FV      +P       +   G
Sbjct: 236 APAAAGIQMAESFLKDKKMILPCAAKVKAGMYGLDEDLFVG-----VP-----TEISANG 285

Query: 295 AEEIFQLGPLNEYESGLF 312
              I ++  +++ E    
Sbjct: 286 VRPI-EV-EISDKEREQL 301

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* Length = 322

 Score =  136 bits (346), Expect = 1e-37
 Identities = 83/322 (25%), Positives = 139/322 (43%), Gaps = 56/322 (17%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 79
           K+ ++G+ G IG  +A L+    L  V+ L+D+V     G   D SH     V+     +
Sbjct: 6   KIVLVGS-GMIGGVMATLIVQKNLGDVV-LFDIVKNMPHGKALDTSH---TNVMAYSNCK 60

Query: 80  PQLEN---ALTGMDLVIIPAGVPRKPGMT-----RDDLFNINAGIVRTLCEGIAKCCPNA 131
               N    L G D+VI+ AG  + PG +     RDDL  +N  I+  +   I K CPNA
Sbjct: 61  VSGSNTYDDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNA 120

Query: 132 TVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDV 190
            + +++NPV+    +  ++  +       K++G+  +LD  R   ++++ L + PRDV+ 
Sbjct: 121 FIIVVTNPVD----VMVQLLHQHSGVPKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNA 176

Query: 191 PVVGGHAGVTILPL----------LSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGA 240
            +VG H G  ++ L          L +       +  E E + +R  N   E+V      
Sbjct: 177 HIVGAH-GNKMVLLKRYITVGGIPLQEFINNKLISDAELEAIFDRTVNTALEIVNLH--- 232

Query: 241 GSATLSMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRL 290
            S  ++ A A ++ A++ L+           L G  G  +           P     V L
Sbjct: 233 ASPYVAPAAAIIEMAESYLKDLKKVLICSTLLEGQYGHSDI------FGGTP-----VVL 281

Query: 291 GRQGAEEIFQLGPLNEYESGLF 312
           G  G E++ +L  LN  E   F
Sbjct: 282 GANGVEQVIEL-QLNSEEKAKF 302

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* Length = 316

 Score =  136 bits (345), Expect = 2e-37
 Identities = 68/319 (21%), Positives = 120/319 (37%), Gaps = 54/319 (16%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 79
           +V ++GA G +G      +    +   + L D       G   D +H   G V   F  +
Sbjct: 8   RVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNH---GKV---FAPK 60

Query: 80  PQLENA-----LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 134
           P              DLV+I AG  +KPG TR DL + N  I R++ E +          
Sbjct: 61  PVDIWHGDYDDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFL 120

Query: 135 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVV 193
           + +NPV+    I      K      ++++G  T+LD  R    + E   + P++V   ++
Sbjct: 121 VATNPVD----ILTYATWKFSGLPHERVIGSGTILDTARFRFLLGEYFSVAPQNVHAYII 176

Query: 194 GGH--------AGVTI--LPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSA 243
           G H        +   I  +P+   V+      Q++ E +   +++   +++E K   G+ 
Sbjct: 177 GEHGDTELPVWSQAYIGVMPIRKLVESKGEEAQKDLERIFVNVRDAAYQIIEKK---GAT 233

Query: 244 TLSMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQ 293
              +A    +   A L            L G  G  +          +P       + R 
Sbjct: 234 YYGIAMGLARVTRAILHNENAILTVSAYLDGLYGERDVYI------GVP-----AVINRN 282

Query: 294 GAEEIFQLGPLNEYESGLF 312
           G  E+ ++  LN+ E   F
Sbjct: 283 GIREVIEI-ELNDDEKNRF 300

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 Length = 318

 Score =  135 bits (342), Expect = 4e-37
 Identities = 66/318 (20%), Positives = 120/318 (37%), Gaps = 54/318 (16%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 79
           KV ++G  G +G   A  M    +     + DVV   T G   D+           F   
Sbjct: 7   KVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLED---AQA---FTAP 59

Query: 80  PQLE----NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL 135
            ++     +     DLV+I AG P+KPG +R DL N N  I+ ++ + +     +    +
Sbjct: 60  KKIYSGEYSDCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLV 119

Query: 136 ISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVG 194
            +NPV+    I      K   +  ++++G  T LD  R    + +   +DPR VD  ++G
Sbjct: 120 AANPVD----ILTYATWKFSGFPKERVIGSGTSLDSSRLRVALGKQFNVDPRSVDAYIMG 175

Query: 195 GHAGVTILPLLSQVK----------PPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSAT 244
            H G +     S                  + ++   L + ++N   +++  K   G+  
Sbjct: 176 EH-GDSEFAAYSTATIGTRPVRDVAKEQGVSDDDLAKLEDGVRNKAYDIINLK---GATF 231

Query: 245 LSMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQG 294
             +  A ++ + A LR           + G  G+ +           P       +G  G
Sbjct: 232 YGIGTALMRISKAILRDENAVLPVGAYMDGQYGLNDIYI------GTP-----AIIGGTG 280

Query: 295 AEEIFQLGPLNEYESGLF 312
            ++I +  PL+  E    
Sbjct: 281 LKQIIES-PLSADELKKM 297

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* Length = 326

 Score =  135 bits (342), Expect = 5e-37
 Identities = 72/319 (22%), Positives = 123/319 (38%), Gaps = 54/319 (16%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 79
           KVA++GA G +G   A  +    +   L + DV      G   D++H   G     F  Q
Sbjct: 7   KVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNH---GKA---FAPQ 59

Query: 80  PQLENA-----LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 134
           P   +          D+V I AG  +KPG TR +L   N  I + +   +     +    
Sbjct: 60  PVKTSYGTYEDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFL 119

Query: 135 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVV 193
           + +NPV+    I      K      ++++G  T LD  R    ++E  G  P++V   ++
Sbjct: 120 VATNPVD----ILTYATWKFSGLPKERVIGSGTTLDSARFRFMLSEYFGAAPQNVCAHII 175

Query: 194 GGH--------AGVTI--LPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSA 243
           G H        +   +  +P+   V+   ++ QEE + + + ++N    ++E K   G+ 
Sbjct: 176 GEHGDTELPVWSHANVGGVPVSELVEKNDAYKQEELDQIVDDVKNAAYHIIEKK---GAT 232

Query: 244 TLSMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQ 293
              +A +  +   A L            L G  G  +          +P       + R 
Sbjct: 233 YYGVAMSLARITKAILHNENSILTVSTYLDGQYGADDVYI------GVP-----AVVNRG 281

Query: 294 GAEEIFQLGPLNEYESGLF 312
           G   I +L  LNE E   F
Sbjct: 282 GIAGITEL-NLNEKEKEQF 299

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* Length = 326

 Score =  134 bits (341), Expect = 8e-37
 Identities = 68/318 (21%), Positives = 127/318 (39%), Gaps = 53/318 (16%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 79
           KV ++G  G +G   A  M +  +   + + D+    T G   D+S+         F   
Sbjct: 11  KVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSN---ALP---FTSP 63

Query: 80  PQLE----NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL 135
            ++     +     DLV+I AG P+KPG TR DL N N  I++++ + I     N    +
Sbjct: 64  KKIYSAEYSDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLV 123

Query: 136 ISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVG 194
            +NPV+    I      K   +   +++G  T LD  R    +AE++ +D R V   ++G
Sbjct: 124 AANPVD----ILTYATWKLSGFPKNRVVGSGTSLDTARFRQSIAEMVNVDARSVHAYIMG 179

Query: 195 GH--------AGVTI--LPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSAT 244
            H        +   I  + +   VK      +++   +   +++   E+++ K   G+  
Sbjct: 180 EHGDTEFPVWSHANIGGVTIAEWVKAHPEIKEDKLVKMFEDVRDAAYEIIKLK---GATF 236

Query: 245 LSMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQG 294
             +A A  + + A L            + G  G+ +           P       + R G
Sbjct: 237 YGIATALARISKAILNDENAVLPLSVYMDGQYGLNDIYI------GTP-----AVINRNG 285

Query: 295 AEEIFQLGPLNEYESGLF 312
            + I ++ PL ++E    
Sbjct: 286 IQNILEI-PLTDHEEESM 302

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* Length = 317

 Score =  134 bits (339), Expect = 1e-36
 Identities = 68/319 (21%), Positives = 121/319 (37%), Gaps = 55/319 (17%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 79
           KV ++G  G +G   A  +    +V  L + D+      G   D+ H         +   
Sbjct: 8   KVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKH---ATP---YSPT 60

Query: 80  PQLENA-----LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 134
                A         DLV+I AG  +KPG TR DL + N  I +++   +     +    
Sbjct: 61  TVRVKAGEYSDCHDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFL 120

Query: 135 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVV 193
           + +NPV+    I A    K      ++++G  T+LD  R    ++E   + PR VD  ++
Sbjct: 121 VATNPVD----ILAYATWKFSGLPKERVIGSGTILDSARFRLLLSEAFDVAPRSVDAQII 176

Query: 194 GGHAGVTILPLLSQVK----------PPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSA 243
           G H G T LP+ S                   + + E +  + ++   ++++AK   G+ 
Sbjct: 177 GEH-GDTELPVWSHANIAGQPLKTLLEQRPEGKAQIEQIFVQTRDAAYDIIQAK---GAT 232

Query: 244 TLSMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQ 293
              +A    +  +A  R           L G+    +          +P       + R 
Sbjct: 233 YYGVAMGLARITEAIFRNEDAVLTVSALLEGEYEEEDVY--IG----VP-----AVINRN 281

Query: 294 GAEEIFQLGPLNEYESGLF 312
           G   + ++ PLN+ E   F
Sbjct: 282 GIRNVVEI-PLNDEEQSKF 299

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 Length = 319

 Score =  134 bits (339), Expect = 1e-36
 Identities = 84/318 (26%), Positives = 133/318 (41%), Gaps = 53/318 (16%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 79
           K+ I+G  G +G   A  + +      + L DV      G   D+ H   G     F  +
Sbjct: 2   KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIH---GTP---FTRR 54

Query: 80  PQLE----NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL 135
             +       L G D+VI+ AGVP+KPG TR  L   NA +++ +   ++K  P++ V +
Sbjct: 55  ANIYAGDYADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIV 114

Query: 136 ISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVG 194
           ++NPV+    +    F K    DP+K+ G  T+LD  R  T +A+  G  PR V V V+G
Sbjct: 115 VTNPVD----VLTYFFLKESGMDPRKVFGSGTVLDTARLRTLIAQHCGFSPRSVHVYVIG 170

Query: 195 GH--------AGVTI--LPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSAT 244
            H        +G  I  +PL +  +       +  E    + +    E++E K   G+  
Sbjct: 171 EHGDSEVPVWSGAMIGGIPLQNMCQVCQKCDSKILENFAEKTKRAAYEIIERK---GATH 227

Query: 245 LSMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQG 294
            ++A A     ++              L    GV +          +P     V LG+ G
Sbjct: 228 YAIALAVADIVESIFFDEKRVLTLSVYLEDYLGVKDLCI------SVP-----VTLGKHG 276

Query: 295 AEEIFQLGPLNEYESGLF 312
            E I +L  LNE E   F
Sbjct: 277 VERILEL-NLNEEELEAF 293

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T* Length = 319

 Score =  134 bits (339), Expect = 1e-36
 Identities = 66/322 (20%), Positives = 119/322 (36%), Gaps = 58/322 (18%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 79
           K+A++GA G +G  LA       +   + L D+          D+ H   G+    F   
Sbjct: 9   KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQH---GSS---FYPT 61

Query: 80  PQLE-----NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 134
             ++           D+V+I AG  +KPG +R +L      I++ +   + K  PNA   
Sbjct: 62  VSIDGSDDPEICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYM 121

Query: 135 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVV 193
           LI+NPV+    IA  V +K       ++ G  T LD  R    +A+  G++ ++V   + 
Sbjct: 122 LITNPVD----IATHVAQKLTGLPENQIFGSGTNLDSARLRFLIAQQTGVNVKNVHAYIA 177

Query: 194 GGH-------------AGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGA 240
           G H              GV +               ++ E +   ++N   +++  K   
Sbjct: 178 GEHGDSEVPLWESATIGGVPMSDWTPLPGHDP-LDADKREEIHQEVKNAAYKIINGK--- 233

Query: 241 GSATLSMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRL 290
           G+   ++  + V   +A L            L+   G+ +          +P       L
Sbjct: 234 GATNYAIGMSGVDIIEAVLHDTNRILPVSSMLKDFHGISDICM------SVP-----TLL 282

Query: 291 GRQGAEEIFQLGPLNEYESGLF 312
            RQG        P+++ E    
Sbjct: 283 NRQGVNNTINT-PVSDKELAAL 303

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... Length = 331

 Score =  133 bits (338), Expect = 2e-36
 Identities = 68/321 (21%), Positives = 133/321 (41%), Gaps = 56/321 (17%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 79
           K+ ++G  G +G   A+ + +  L   L L DV+     G   D+ H   G++   FL  
Sbjct: 21  KITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQH---GSL---FLKT 73

Query: 80  PQLENA-----LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 134
           P++ ++          LVII AG  ++ G +R +L   N  I + +   + K  P   + 
Sbjct: 74  PKIVSSKDYSVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLL 133

Query: 135 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVV 193
           ++SNPV+    I   V  K   +   +++G    LD  R    + E LG+ P      V+
Sbjct: 134 IVSNPVD----ILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVL 189

Query: 194 GGHAGVTILPLLSQV------------KPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAG 241
           G H G + +P+ S V            +      +E+ + +  ++ +   EV++ K   G
Sbjct: 190 GEH-GDSSVPVWSGVNVAGVSLKSLNPQLGTDADKEQWKDVHKQVVDSAYEVIKLK---G 245

Query: 242 SATLSMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLG 291
             + ++  +    A++ ++           ++G  G+ E  F++     +P       LG
Sbjct: 246 YTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLS-----VP-----CILG 295

Query: 292 RQGAEEIFQLGPLNEYESGLF 312
           + G  ++ ++  L   E    
Sbjct: 296 QNGISDVVKV-TLTPDEEARL 315

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A Length = 310

 Score =  133 bits (336), Expect = 2e-36
 Identities = 65/320 (20%), Positives = 114/320 (35%), Gaps = 56/320 (17%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 79
           KV I+G+ G +G   A  + +  +   + L D+          DI H         F   
Sbjct: 2   KVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATP------FAHP 54

Query: 80  PQLE----NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL 135
             +       L G   V++ AGV ++PG TR  L + NA +   +   + +  P A + +
Sbjct: 55  VWVWAGSYGDLEGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLV 114

Query: 136 ISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVG 194
            +NPV+    +  +V        P +++G  T+LD  R    +AE L + P+ V   V+G
Sbjct: 115 ATNPVD----VMTQVAYALSGLPPGRVVGSGTILDTARFRALLAEYLRVAPQSVHAYVLG 170

Query: 195 GHAGVTILPLLSQV------------KPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGS 242
            H G + + + S                  + + E+   +   ++     ++E K   G+
Sbjct: 171 EH-GDSEVLVWSSAQVGGVPLLEFAEARGRALSPEDRARIDEGVRRAAYRIIEGK---GA 226

Query: 243 ATLSMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGR 292
               +     +   A L                AGV+E +        LP       LG 
Sbjct: 227 TYYGIGAGLARLVRAILTDEKGVYTVSAFTPEVAGVLEVSL------SLP-----RILGA 275

Query: 293 QGAEEIFQLGPLNEYESGLF 312
            G         L+  E    
Sbjct: 276 GGVAGTVYP-SLSPEERAAL 294

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 Length = 318

 Score =  132 bits (334), Expect = 5e-36
 Identities = 79/321 (24%), Positives = 134/321 (41%), Gaps = 58/321 (18%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 79
           KVAI+GA G +G   A  M +    + L L DV      G   DI+H   G     F+GQ
Sbjct: 9   KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINH---GLP---FMGQ 61

Query: 80  PQLE----NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL 135
             L     + +   D++++ AG  RKPG TR DL   N  I + + + I K   +  + +
Sbjct: 62  MSLYAGDYSDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILV 121

Query: 136 ISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVG 194
           +SNPV+    I   + +K       K++G  T+LD +R    ++E LG+D ++V   ++G
Sbjct: 122 VSNPVD----IITYMIQKWSGLPVGKVIGSGTVLDSIRFRYLLSEKLGVDVKNVHGYIIG 177

Query: 195 GH-------------AGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAG 241
            H             AG  I   +   K    FT+E+ + +   ++  G  +++ K   G
Sbjct: 178 EHGDSQLPLWSCTHIAGKNINEYIDDPKCN--FTEEDKKKIAEDVKTAGATIIKNK---G 232

Query: 242 SATLSMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLG 291
           +    +A +     +  L+           + G  G+ + A        LP       + 
Sbjct: 233 ATYYGIAVSINTIVETLLKNQNTIRTVGTVINGMYGIEDVAI------SLP-----SIVN 281

Query: 292 RQGAEEIFQLGPLNEYESGLF 312
            +G +E+ Q   L   E    
Sbjct: 282 SEGVQEVLQF-NLTPEEEEAL 301

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A Length = 303

 Score =  128 bits (324), Expect = 1e-34
 Identities = 53/299 (17%), Positives = 99/299 (33%), Gaps = 44/299 (14%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTPGVTADISHMDTGAVVRGFLGQP 80
           K+ ++G  G +G    + +    +   L L D+   T G T D+   +   V        
Sbjct: 16  KITVVGG-GELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEIS--KDL 72

Query: 81  QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV 140
              +A     +VI           +  D+   N  + R L   +     ++ + + S P 
Sbjct: 73  ---SASAHSKVVIFTVN-SLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQP- 127

Query: 141 NSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGV 199
              V I   V  K  T+   +++G+   LD  R    +  VL       +V V+G   G 
Sbjct: 128 ---VEIMTYVTWKLSTFPANRVIGIGCNLDSQRLQYIITNVLKAQTSGKEVWVIGEQ-GE 183

Query: 200 TILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACL 259
             +   S  +         +     ++ N   E++  K   G  + S+  +     D+ +
Sbjct: 184 DKVLTWSGQEE------VVSHTSQVQLSNRAMELLRVK---GQRSWSVGLSVADMVDSIV 234

Query: 260 RG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYE 308
                        +G   +    F++     LP       LG  G  E+ +   L E  
Sbjct: 235 NNKKKVHSVSALAKGYYDINSEVFLS-----LP-----CILGTNGVSEVIKT-TLKEDT 282

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* Length = 333

 Score =  129 bits (325), Expect = 1e-34
 Identities = 67/316 (21%), Positives = 117/316 (37%), Gaps = 41/316 (12%)

Query: 22  KVAILGAAGGIGQPLA-------MLMKINPLVSVLHLYDVVNTP----GVTADISHMDTG 70
           +V + GAAG I   L        +  K  P++  L L D+        GV  ++   D  
Sbjct: 5   RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPII--LVLLDITPMMGVLDGVLMEL--QDCA 60

Query: 71  AV-VRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP 129
              ++  +   + E A   +D+ I+   +PR+ GM R DL   N  I +     + K   
Sbjct: 61  LPLLKDVIATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAK 120

Query: 130 NAT-VNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDV 188
            +  V ++ NP N+    A+   K A +   +    +T LD  RA   +A  LG+   DV
Sbjct: 121 KSVKVIVVGNPANTNCLTAS---KSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTSDDV 177

Query: 189 DVPVVGGHAGVTILPLLSQ-----------VKPPCSFTQEETEYLTNRIQNGGTEVVEAK 237
              ++ G+   T  P ++            V                 +Q  G  V++A+
Sbjct: 178 KNVIIWGNHSSTQYPDVNHAKVKLQAKEVGVYEAVKDDSWLKGEFITTVQQRGAAVIKAR 237

Query: 238 AGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQ-----VTELPFFASKVRLGR 292
               SA +S A A          G     G      + S      V +   ++  V +  
Sbjct: 238 -KLSSA-MSAAKAICDHVRDIWFG--TPEGEFVSMGIISDGNSYGVPDDLLYSFPVTIKD 293

Query: 293 QGAEEIFQLGPLNEYE 308
           +  + +  L P+N++ 
Sbjct: 294 KTWKIVEGL-PINDFS 308

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} Length = 304

 Score =  125 bits (316), Expect = 1e-33
 Identities = 68/313 (21%), Positives = 114/313 (36%), Gaps = 48/313 (15%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQ 79
           KV ++G  G +G   A  + +    S L L D           DI+H             
Sbjct: 2   KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHA------APVSHG 54

Query: 80  PQLE----NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL 135
            ++     + L    +VI+ AG  +KPG +R DL   NA I R L   I +  P+A + +
Sbjct: 55  TRVWHGGHSELADAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLV 114

Query: 136 ISNPVNSTVPIAAEVFKKAGTYDPK-KLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVV 193
            SNPV+    +  ++  +     P   ++G  T+LD  R    +A+  G+D       V+
Sbjct: 115 TSNPVD----LLTDLATQ---LAPGQPVIGSGTVLDSARFRHLMAQHAGVDGTHAHGYVL 167

Query: 194 GGH-------------AGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGA 240
           G H             AG+ +   +     P  + ++    +    +N    ++E K   
Sbjct: 168 GEHGDSEVLAWSSAMVAGMPVADFMQAQNLP--WNEQVRAKIDEGTRNAAASIIEGK--- 222

Query: 241 GSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASK-VRLGRQGAEEIF 299
            +    +  A  +  +A LR  R          V++   E     S    +GRQG     
Sbjct: 223 RATYYGIGAALARITEAVLRDRR------AVLTVSAPTPEYGVSLSLPRVVGRQGVLSTL 276

Query: 300 QLGPLNEYESGLF 312
               L   E    
Sbjct: 277 HP-KLTGDEQQKL 288

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A* Length = 375

 Score =  126 bits (318), Expect = 3e-33
 Identities = 64/313 (20%), Positives = 104/313 (33%), Gaps = 38/313 (12%)

Query: 22  KVAILGAAGGIGQPLA-------MLMKINPLVSVLHLYDVVNTP----GVTADISHMDTG 70
            +A+ GAAG I   L        +  +  P+   L L     +     GV  ++   D+ 
Sbjct: 34  NIAVSGAAGMISNHLLFKLASGEVFGQDQPIA--LKLLGSERSFQALEGVAMEL--EDSL 89

Query: 71  AV-VRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP 129
              +R              +D  ++    PR PGM R  L +IN  I     + +     
Sbjct: 90  YPLLREVSIGIDPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVAS 149

Query: 130 -NATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDV 188
            N  V ++ NP N+   I     K A     K    +T LD  RA   +A   G+    V
Sbjct: 150 KNVKVLVVGNPCNTNALICL---KNAPDIPAKNFHALTRLDENRAKCQLALKAGVFYDKV 206

Query: 189 DVPVVGGHAGVTILPLLSQ-------VKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAG 241
               + G+   T +P           VK     T+   E  T  +Q  G  +++   G  
Sbjct: 207 SNVTIWGNHSTTQVPDFLNAKIDGRPVKEVIKRTKWLEEEFTITVQKRGGALIQKW-GRS 265

Query: 242 SATLSMAYAAVKFADACLRGLRGDAG-VVECAFVASQ-----VTELPFFASKVRLGRQGA 295
           SA  S A +      + +       G       V +      + E   F+   R    G 
Sbjct: 266 SA-ASTAVSIADAIKSLVTP--TPEGDWFSTG-VYTTGNPYGIAEDIVFSMPCRSKGDGD 321

Query: 296 EEIFQLGPLNEYE 308
            E+      +++ 
Sbjct: 322 YELATDVSNDDFL 334

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* Length = 327

 Score =  124 bits (314), Expect = 5e-33
 Identities = 78/310 (25%), Positives = 122/310 (39%), Gaps = 35/310 (11%)

Query: 22  KVAILGAAGGIGQPLA-------MLMKINPLVSVLHLYDVVNTPGVTADISHMDT----G 70
           +VA+ GAAG IG  L        ML K  P++  L L ++        +   M+      
Sbjct: 6   RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVI--LQLLEIPQAMKA-LEGVVMELEDCAF 62

Query: 71  AVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPN 130
            ++ G       + A    D  ++    PRK GM R DL  +N  I       +A+    
Sbjct: 63  PLLAGLEATDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKK 122

Query: 131 AT-VNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD 189
              V ++ NP N+   IA    K A   +P+    +T LD  RA   +A+  G     + 
Sbjct: 123 DVKVLVVGNPANTNALIAY---KNAPGLNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIR 179

Query: 190 VPVVGGHAGVTILPLLSQV----KPPCSFTQEE--TEYLTNRIQNGGTEVVEAKAGAGSA 243
              V G+   T+ P L       +P       E   +     +   G  +++A+ GA SA
Sbjct: 180 RMTVWGNHSSTMFPDLFHAEVDGRPALELVDMEWYEKVFIPTVAQRGAAIIQAR-GASSA 238

Query: 244 TLSMAYAAVK-FADACLRGLRGDAGVVECAFVASQ----VTELPFFASKVRLGRQGAEEI 298
             S A AA++   D  L    GD   V  A V SQ    + E   ++  V   + GA  +
Sbjct: 239 -ASAANAAIEHIRDWALGTPEGD--WVSMA-VPSQGEYGIPEGIVYSFPVT-AKDGAYRV 293

Query: 299 FQLGPLNEYE 308
            +   +NE+ 
Sbjct: 294 VEGLEINEFA 303

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ojs_A* 2x0i_A* 2x0j_A* Length = 294

 Score =  123 bits (311), Expect = 6e-33
 Identities = 65/309 (21%), Positives = 124/309 (40%), Gaps = 50/309 (16%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 79
           K+  +GA G +G   A    +N  V  + L D+      G   D++H    A        
Sbjct: 2   KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAH---AAAGIDK--Y 55

Query: 80  PQLENA-----LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 134
           P++        L G +++++ AG+ RKPGMTR DL + NAGI++ + + I +  P + + 
Sbjct: 56  PKIVGGADYSLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKIL 115

Query: 135 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVV 193
           +++NP++    +   +  K       ++ G+   LD  R    +      + R     ++
Sbjct: 116 VVTNPMD----VMTYIMWKESGKPRNEVFGMGNQLDSQRLKERLYNAGARNIRRAW--II 169

Query: 194 GGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVK 253
           G H G ++    S         + + E + N ++    EV++ K   G+     A A  +
Sbjct: 170 GEH-GDSMFVAKSLADFDG---EVDWEAVENDVRFVAAEVIKRK---GATIFGPAVAIYR 222

Query: 254 FADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGP 303
              A +            L+G+ G+                    +LG+ GA E+  +  
Sbjct: 223 MVKAVVEDTGEIIPTSMILQGEYGIENV-----------AVGVPAKLGKNGA-EVADI-K 269

Query: 304 LNEYESGLF 312
           L++ E    
Sbjct: 270 LSDEEIEKL 278

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A Length = 329

 Score =  123 bits (311), Expect = 1e-32
 Identities = 64/253 (25%), Positives = 96/253 (37%), Gaps = 31/253 (12%)

Query: 22  KVAILGAAGGIGQPLA-------MLMKINPLVSVLHLYDVVNTP------GVTADISHMD 68
           +VA+ GAAG I   L        ML K  P++  L L ++ N        GV  +I   D
Sbjct: 7   RVAVTGAAGQICYSLLFRIANGDMLGKDQPVI--LQLLEIPNEKAQKALQGVMMEI--DD 62

Query: 69  TGA-VVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC 127
               ++ G         A    D+ ++    PR PGM R DL   NA I     + I   
Sbjct: 63  CAFPLLAGMTAHADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAV 122

Query: 128 C-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPR 186
              N  V ++ NP N+   IA    K A +   K    +  LD  RA + +A   G    
Sbjct: 123 ASRNIKVLVVGNPANTNAYIAM---KSAPSLPAKNFTAMLRLDHNRALSQIAAKTGKPVS 179

Query: 187 DVDVPVVGGHAGVTILPLLSQ-------VKPPCSFTQEETEYLTNRIQNGGTEVVEAKAG 239
            ++   V G+   T+             VK   +      +     +   G  +++A+ G
Sbjct: 180 SIEKLFVWGNHSPTMYADYRYAQIDGASVKDMINDDAWNRDTFLPTVGKRGAAIIDAR-G 238

Query: 240 AGSATLSMAYAAV 252
             SA  S A AA+
Sbjct: 239 VSSA-ASAANAAI 250

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 Length = 330

 Score =  120 bits (304), Expect = 1e-31
 Identities = 49/252 (19%), Positives = 88/252 (34%), Gaps = 25/252 (9%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 79
           K+ ++G    +G   A+ + +  L   + L DV+     G   D+ H   G++   FL  
Sbjct: 23  KITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEH---GSL---FLHT 75

Query: 80  PQLE-----NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 134
            ++      +   G  LV+I AG  ++ G +R +L   N  I + +   I K  P+    
Sbjct: 76  AKIVSGKDYSVSAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKE 135

Query: 135 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVV 193
           L             +   K       +++G    LD  R    + E LG+    V   V+
Sbjct: 136 LHPELGT----DKNKQDWKLSGLPMHRIIGSGCNLDSARFRYLMGERLGVHSCLVIGWVI 191

Query: 194 GGHAGVTILPLLSQV---KPPCSF--TQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMA 248
           G H G ++  + S +   K       +  E   L          VV       +      
Sbjct: 192 GQH-GDSVPSVWSGMWDAKLHKDVVDSAYEVIKLKGYTSWAIGLVVSNPVDVLTYVAWKG 250

Query: 249 YAAVKFADACLR 260
            +    A   ++
Sbjct: 251 CSVADLAQTIMK 262

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1 Length = 309

 Score =  119 bits (302), Expect = 2e-31
 Identities = 60/311 (19%), Positives = 105/311 (33%), Gaps = 42/311 (13%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQ 79
           K+ I+G  G +G  +A  +    +       D           D             L  
Sbjct: 3   KIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDA------MANLEA 55

Query: 80  PQLENA-----LTGMDLVIIPAGVPR----KPGMTRDDLFNINAGIVRTLCEGIAKCCPN 130
                      L   D+VI   G  +     P   R       + +V+++   + +   +
Sbjct: 56  HGNIVINDWAALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFH 115

Query: 131 ATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVD 189
             + +ISNPV+    +   +F+    +   K++G  T+LD  R    V E   LDPR V 
Sbjct: 116 GVLVVISNPVD----VITALFQHVTGFPAHKVIGTGTLLDTARMQRAVGEAFDLDPRSVS 171

Query: 190 VPVVGGHAGVTILPLLSQV----KPPCSFTQEETEYLTN---RIQNGGTEVVEAKAGAGS 242
              +G H G +     S V    +P  +        L       + GG  V+  K   G 
Sbjct: 172 GYNLGEH-GNSQFVAWSTVRVMGQPIVTLADAGDIDLAAIEEEARKGGFTVLNGK---GY 227

Query: 243 ATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASK-VRLGRQGAEEIFQL 301
            +  +A +A++ A A +              V+++  ++  + S    +GR G      L
Sbjct: 228 TSYGVATSAIRIAKAVMADAH------AELVVSNRRDDMGMYLSYPAIIGRDGVLAETTL 281

Query: 302 GPLNEYESGLF 312
             L   E    
Sbjct: 282 -DLTTDEQEKL 291

>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 Length = 480

 Score = 53.7 bits (128), Expect = 4e-08
 Identities = 40/210 (19%), Positives = 64/210 (30%), Gaps = 45/210 (21%)

Query: 19  AGFKVAILGAAGGIGQP---LAMLMKINPL-VSVLHLYDV----VNTPGVTADISHMDTG 70
              K+ I+GA G        ++ L K   L  S + L D+    ++     A     + G
Sbjct: 2   PSVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVG 60

Query: 71  AVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRT----------- 119
           A ++ F     L++ +   D VI  A V     + +        G  R            
Sbjct: 61  ADLK-FEKTMNLDDVIIDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSD 119

Query: 120 ---------------LCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG 164
                          +   I K  P A     +NP+         +  +     P K +G
Sbjct: 120 YYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPIFEG----TTLVTRTV---PIKAVG 172

Query: 165 VTMLDVVRANTFVAEVLGLDPRDVDVPVVG 194
                       + E LGL+   VD  V G
Sbjct: 173 FC--HGHYGVMEIVEKLGLEEEKVDWQVAG 200

>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis} Length = 450

 Score = 51.3 bits (122), Expect = 2e-07
 Identities = 35/204 (17%), Positives = 64/204 (31%), Gaps = 28/204 (13%)

Query: 19  AGFKVAILGAAGGIG---QPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVR 74
              K+A +G  G  G     ++ L     +   + LYD+          I +       R
Sbjct: 4   DQIKIAYIGG-GSQGWARSLMSDLSIDERMSGTVALYDLDFEAAQKNEVIGNHSGNGRWR 62

Query: 75  GFLGQPQLENALTGMDLVIIPAGV------------PRKPGMTRDDLFNINAG------- 115
            +     L+ AL+  D+VII                P + G+ +     +  G       
Sbjct: 63  -YEAVSTLKKALSAADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLR 121

Query: 116 ---IVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVR 172
              I   +   I    P + V   +NP++    +  +VF           +  T   +  
Sbjct: 122 AVPIFAEIARAIRDYAPESWVINYTNPMSVCTRVLYKVFPGIKAIGCCHEVFGTQKLLAE 181

Query: 173 ANTFVAEVLGLDPRDVDVPVVGGH 196
             T    +      D+ V V+G +
Sbjct: 182 MVTERLGIEVPRREDIRVNVLGIN 205

>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2 Length = 472

 Score = 50.9 bits (121), Expect = 4e-07
 Identities = 39/251 (15%), Positives = 75/251 (29%), Gaps = 42/251 (16%)

Query: 8   RQAKCRAKGGAAGFKVAILGAAGGIGQP---LAMLMKINPL-VSVLHLYDV----VNTPG 59
                ++      F + I G  G    P   L +L  +    +  L LYD      +   
Sbjct: 16  ENLYFQSNMKKKSFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIA 74

Query: 60  VTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRT 119
              D+   +    +  F      E A T +D V+    V +      D+   +  G+V  
Sbjct: 75  GACDVFIREKAPDIE-FAATTDPEEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQ 133

Query: 120 --------------------LCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDP 159
                               + + + K  P+A +   SNP          +         
Sbjct: 134 ETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPAAIVAEATRRLRPN------ 187

Query: 160 KKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEET 219
            K+L +  +  V     +A++LGL  R     +   + G+      + ++       +  
Sbjct: 188 SKILNICDM-PVGIEDRMAQILGLSSRKE---MKVRYYGLNHFGWWTSIQDQE--GNDLM 241

Query: 220 EYLTNRIQNGG 230
             L   +   G
Sbjct: 242 PKLKEHVSQYG 252

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.2 bits (111), Expect = 7e-06
 Identities = 50/346 (14%), Positives = 86/346 (24%), Gaps = 133/346 (38%)

Query: 72  VVRGFLGQP--QLENALT-----------GMD------LVIIPAGVPRKPGMTRDDLFNI 112
           V R    QP  +L  AL            G+       +      V     +     F I
Sbjct: 131 VSRL---QPYLKLRQALLELRPAKNVLIDGVLGSGKTWVA---LDVCLSYKVQCKMDFKI 184

Query: 113 ---NAGIVRT---LCEGIAKCCPNATVNLISNPVNS-TVPIAAEVFK-------KAGTYD 158
              N     +   + E + K       N  S   +S  + +     +       K+  Y 
Sbjct: 185 FWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPY- 243

Query: 159 PKKLLGVTMLD------VVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC 212
              LL   +L          A     ++L L  R   V      A  T + L        
Sbjct: 244 ENCLL---VLLNVQNAKAWNAFNLSCKIL-LTTRFKQVTDFLSAATTTHISL---DHHSM 296

Query: 213 SFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA 272
           + T +E + L                                                  
Sbjct: 297 TLTPDEVKSL-------------------------------LLK---------------- 309

Query: 273 FVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWLGESEERVSW 332
           ++  +  +LP              E+    P          ++    +D L   +    W
Sbjct: 310 YLDCRPQDLP-------------REVLTTNPR------RLSIIAESIRDGLATWDN---W 347

Query: 333 KHSKGHLLQQEMKRC---------QEKFHRLSFFSLES--PSPVIS 367
           KH     L   ++           ++ F RLS F   +  P+ ++S
Sbjct: 348 KHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLS 393

>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2 Length = 450

 Score = 45.9 bits (108), Expect = 1e-05
 Identities = 33/204 (16%), Positives = 63/204 (30%), Gaps = 37/204 (18%)

Query: 20  GFKVAILGA----AGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM-----DTG 70
             K+A +G        + + L       P V  L L D+         +  +     +  
Sbjct: 7   RLKIATIGGGSSYTPELVEGLIKRYHELP-VGELWLVDIPEGKEKLEIVGALAKRMVEKA 65

Query: 71  AVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRT----------- 119
            V            AL G D V     V       +D+   +  G++             
Sbjct: 66  GVPIEIHLTLDRRRALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKG 125

Query: 120 ---------LCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDV 170
                    +   + + CP+A +   +NP            K+      +K++G+  +  
Sbjct: 126 LRTIPVILDIIRDMEELCPDAWLINFTNPAGMVTEAVLRYTKQ------EKVVGLCNV-P 178

Query: 171 VRANTFVAEVLGLDPRDVDVPVVG 194
           +     VA++LG+D   V +   G
Sbjct: 179 IGMRMGVAKLLGVDADRVHIDFAG 202

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	369
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	100.0
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	100.0
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	100.0
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	100.0
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	100.0
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	100.0
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	100.0
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	100.0
3tl2_A	315	Malate dehydrogenase; center for structural genomi	100.0
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	100.0
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	100.0
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	100.0
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	100.0
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	100.0
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	100.0
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	100.0
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	100.0
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	100.0
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	100.0
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	100.0
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	100.0
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	100.0
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	100.0
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	100.0
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	100.0
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	100.0
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	100.0
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	100.0
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	100.0
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	100.0
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	100.0
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	100.0
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	100.0
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	100.0
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	100.0
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	100.0
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	100.0
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	100.0
1up7_A	417	6-phospho-beta-glucosidase; hydrolase, family4 hyd	100.0
1s6y_A	450	6-phospho-beta-glucosidase; hydrolase, structural	100.0
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	100.0
1u8x_X	472	Maltose-6'-phosphate glucosidase; structural genom	100.0
3fef_A	450	Putative glucosidase LPLD; gulosidase, structural	100.0
1obb_A	480	Maltase, alpha-glucosidase; glycosidase, sulfinic	99.98
3u95_A	477	Glycoside hydrolase, family 4; hydrolysis, cytosol	99.97
3ado_A	319	Lambda-crystallin; L-gulonate 3-dehydrogenase, str	98.84
3zwc_A	742	Peroxisomal bifunctional enzyme; beta oxidation pa	98.47
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	98.43
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	98.38
3k6j_A	460	Protein F01G10.3, confirmed by transcript evidenc;	98.35
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	98.34
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	98.3
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	98.3
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	98.27
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	98.26
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	98.26
2o3j_A	481	UDP-glucose 6-dehydrogenase; structural genomics,	98.25
1zcj_A	463	Peroxisomal bifunctional enzyme; peroxisomal multi	98.25
3vtf_A	444	UDP-glucose 6-dehydrogenase; two discrete alpha/be	98.24
1zej_A	293	HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural	98.22
1dlj_A	402	UDP-glucose dehydrogenase; rossmann fold, ternary	98.17
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	98.16
3mog_A	483	Probable 3-hydroxybutyryl-COA dehydrogenase; struc	98.15
2wtb_A	725	MFP2, fatty acid multifunctional protein (ATMFP2);	98.13
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	98.12
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	98.09
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	98.09
3pid_A	432	UDP-glucose 6-dehydrogenase; rossmann fold, oxidor	98.07
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	98.05
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	98.05
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	98.04
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	98.03
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	98.02
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	98.01
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	97.99
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	97.99
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	97.98
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	97.98
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	97.98
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	97.96
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	97.95
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	97.95
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	97.94
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	97.94
1wdk_A	715	Fatty oxidation complex alpha subunit; alpha2BETA2	97.92
2q3e_A	467	UDP-glucose 6-dehydrogenase; hexamer, structural g	97.91
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	97.91
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.91
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	97.91
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	97.9
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	97.9
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	97.9
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	97.86
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	97.85
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	97.85
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	97.82
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	97.82
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	97.8
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	97.8
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	97.79
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	97.79
3i83_A	320	2-dehydropantoate 2-reductase; structural genomics	97.78
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	97.78
2rcy_A	262	Pyrroline carboxylate reductase; malaria, structur	97.77
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	97.77
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	97.77
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	97.76
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	97.75
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	97.74
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	97.74
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	97.74
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	97.73
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	97.73
2izz_A	322	Pyrroline-5-carboxylate reductase 1; amino-acid bi	97.73
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	97.72
1x0v_A	354	GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase	97.72
1yj8_A	375	Glycerol-3-phosphate dehydrogenase; SGPP, structur	97.72
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	97.71
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	97.71
4fgw_A	391	Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxi	97.71
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	97.71
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	97.7
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	97.7
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	97.7
3ghy_A	335	Ketopantoate reductase protein; oxidoreductase, NA	97.69
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	97.68
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	97.67
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	97.67
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	97.66
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	97.66
3hwr_A	318	2-dehydropantoate 2-reductase; YP_299159.1, PANE/A	97.65
1xq6_A	253	Unknown protein; structural genomics, protein stru	97.64
3b1f_A	290	Putative prephenate dehydrogenase; enzyme, 4-hydro	97.64
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	97.63
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	97.62
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	97.62
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	97.62
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	97.61
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	97.61
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	97.61
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	97.6
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	97.58
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	97.58
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.58
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	97.57
3qha_A	296	Putative oxidoreductase; seattle structural genomi	97.56
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	97.56
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	97.56
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	97.56
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	97.56
1ks9_A	291	KPA reductase;, 2-dehydropantoate 2-reductase; PAN	97.56
3hn2_A	312	2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, str	97.55
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	97.53
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	97.53
1z82_A	335	Glycerol-3-phosphate dehydrogenase; TM0378, struct	97.53
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.52
1txg_A	335	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid	97.52
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	97.52
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	97.51
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	97.5
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	97.49
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.48
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	97.47
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	97.46
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	97.46
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	97.45
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	97.45
1evy_A	366	Glycerol-3-phosphate dehydrogenase; rossmann fold,	97.45
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	97.44
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	97.44
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	97.41
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	97.41
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	97.41
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	97.4
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	97.4
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	97.4
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	97.39
3ego_A	307	Probable 2-dehydropantoate 2-reductase; structural	97.39
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	97.39
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	97.38
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	97.38
1yb4_A	295	Tartronic semialdehyde reductase; structural genom	97.37
2zyd_A	480	6-phosphogluconate dehydrogenase, decarboxylating;	97.36
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	97.36
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	97.36
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	97.36
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	97.35
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	97.35
4gwg_A	484	6-phosphogluconate dehydrogenase, decarboxylating;	97.35
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	97.33
4ezb_A	317	Uncharacterized conserved protein; structural geno	97.33
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	97.32
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.32
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	97.32
4f6c_A	427	AUSA reductase domain protein; thioester reductase	97.32
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	97.32
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	97.3
3ojo_A	431	CAP5O; rossmann fold, complex with cofactor NAD an	97.3
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	97.29
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	97.28
2cvz_A	289	Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase;	97.28
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	97.28
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	97.25
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	97.24
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	97.24
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	97.24
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	97.23
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	97.23
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	97.23
1pgj_A	478	6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; o	97.22
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.21
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.2
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	97.2
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	97.2
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	97.19
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	97.19
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	97.19
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	97.19
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	97.19
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	97.18
1yqg_A	263	Pyrroline-5-carboxylate reductase; structural geno	97.18
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	97.18
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	97.18
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	97.17
3c7a_A	404	Octopine dehydrogenase; L) stereospecific opine de	97.17
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	97.17
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.17
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	97.17
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	97.16
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	97.15
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	97.15
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	97.15
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	97.15
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	97.15
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	97.15
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	97.14
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	97.14
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	97.14
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	97.14
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	97.13
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.13
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	97.13
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	97.12
2pgd_A	482	6-phosphogluconate dehydrogenase; oxidoreductase (	97.12
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	97.12
2iz1_A	474	6-phosphogluconate dehydrogenase, decarboxylating;	97.12
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	97.12
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	97.12
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	97.12
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	97.11
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	97.1
2p4q_A	497	6-phosphogluconate dehydrogenase, decarboxylating;	97.1
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	97.1
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	97.09
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	97.09
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	97.09
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	97.09
3imf_A	257	Short chain dehydrogenase; structural genomics, in	97.09
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	97.09
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	97.09
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	97.08
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	97.08
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	97.06
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	97.06
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	97.05
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	97.05
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	97.05
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	97.04
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	97.04
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	97.03
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	97.03
3cxt_A	291	Dehydrogenase with different specificities; rossma	97.03
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	97.03
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	97.02
4f6l_B	508	AUSA reductase domain protein; thioester reductase	97.02
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	97.01
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	97.01
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	97.01
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	96.99
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	96.99
1id1_A	153	Putative potassium channel protein; RCK domain, E.	96.99
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	96.98
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	96.98
1spx_A	278	Short-chain reductase family member (5L265); paral	96.98
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	96.98
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	96.97
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	96.97
1np3_A	338	Ketol-acid reductoisomerase; A DEEP figure-OF-eigh	96.96
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	96.96
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	96.96
2qyt_A	317	2-dehydropantoate 2-reductase; APC81190, porphyrom	96.95
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	96.95
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	96.95
4dqx_A	277	Probable oxidoreductase protein; structural genomi	96.94
3g17_A	294	Similar to 2-dehydropantoate 2-reductase; structur	96.94
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	96.94
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	96.94
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	96.94
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	96.94
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	96.94
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	96.93
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	96.93
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	96.93
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	96.92
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	96.92
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	96.91
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	96.91
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	96.91
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	96.91
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	96.91
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	96.91
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	96.9
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	96.9
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	96.89
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	96.89
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	96.88
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	96.88
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.88
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	96.87
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	96.87
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	96.87
1xq1_A	266	Putative tropinone reducatse; structural genomics,	96.87
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	96.87
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	96.86
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	96.86
3rih_A	293	Short chain dehydrogenase or reductase; structural	96.86
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	96.85
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	96.85
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	96.85
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	96.85
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	96.85
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	96.83
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	96.82
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	96.82
1i36_A	264	Conserved hypothetical protein MTH1747; NADP bindi	96.82
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	96.82
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	96.81
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	96.81
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	96.81
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.79
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	96.79
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	96.78
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	96.78
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	96.77
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	96.77
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	96.76
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	96.76
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	96.75
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	96.75
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	96.75
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	96.75
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	96.74
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	96.74
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	96.74
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	96.73
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	96.73
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	96.73
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	96.72
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	96.72
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	96.72
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	96.72
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	96.71
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	96.71
1xkq_A	280	Short-chain reductase family member (5D234); parra	96.71
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	96.7
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	96.7
3eag_A	326	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME	96.69
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	96.69
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	96.69
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	96.69
1xhl_A	297	Short-chain dehydrogenase/reductase family member	96.69
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	96.69
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	96.67
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	96.67
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	96.67
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	96.66
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	96.65
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	96.65
3ba1_A	333	HPPR, hydroxyphenylpyruvate reductase; two domain	96.65
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	96.64
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	96.63
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	96.63
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	96.62
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	96.61
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	96.6
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	96.6
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	96.58
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	96.56
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	96.56
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	96.56
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	96.55
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	96.53
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	96.53
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	96.52
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	96.52
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	96.51
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	96.51
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	96.5
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	96.49
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	96.49
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	96.48
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	96.45
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	96.45
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	96.42
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	96.41
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	96.4
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.4
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	96.39
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	96.39
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	96.38
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	96.37
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	96.36
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	96.35
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	96.33
2i99_A	312	MU-crystallin homolog; thyroid hormine binding pro	96.32
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	96.32
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	96.31
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	96.31
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	96.3
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	96.3
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	96.26
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	96.25
1x7d_A	350	Ornithine cyclodeaminase; binds NAD+, binds L-orni	96.25
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	96.23
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	96.2
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	96.18
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	96.17
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	96.17
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	96.17
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.14
2yjz_A	201	Metalloreductase steap4; oxidoreductase, metabolic	95.14
2i76_A	276	Hypothetical protein; NADP, dehydrogenase, TM1727,	96.1
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	96.09
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.06
4e4y_A	244	Short chain dehydrogenase family protein; structur	96.05
3hdj_A	313	Probable ornithine cyclodeaminase; APC62486, borde	96.04
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.04
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	96.02
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	96.02
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	96.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	96.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	95.98
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	95.95
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	95.95
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	95.94
1kyq_A	274	Met8P, siroheme biosynthesis protein Met8; homodim	95.92
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	95.92
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	95.88
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	95.81
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	95.79
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	95.77
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.76
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	95.74
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	95.74
3hn7_A	524	UDP-N-acetylmuramate-L-alanine ligase; ATP-binding	95.73
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	95.72
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	95.71
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	95.7
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	95.69
1omo_A	322	Alanine dehydrogenase; two-domain, beta-sandwich-d	95.65
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	95.63
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	95.62
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	95.61
2cuk_A	311	Glycerate dehydrogenase/glyoxylate reductase; stru	95.6
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	95.58
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	95.57
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	95.54
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	95.52
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	95.52
2d0i_A	333	Dehydrogenase; structural genomics, NPPSFA, nation	95.51
3uw3_A	377	Aspartate-semialdehyde dehydrogenase; structural g	95.49
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	95.48
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	95.47
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	95.45
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	95.44
4g65_A	461	TRK system potassium uptake protein TRKA; structur	95.41
3fr7_A	525	Putative ketol-acid reductoisomerase (OS05G057370	95.41
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	95.38
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	95.37
4hv4_A	494	UDP-N-acetylmuramate--L-alanine ligase; MURC, yers	95.36
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	95.33
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	95.32
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	95.32
3l07_A	285	Bifunctional protein fold; structural genomics, ID	95.3
1qp8_A	303	Formate dehydrogenase; oxidoreductase; HET: NDP; 2	95.29
1ygy_A	529	PGDH, D-3-phosphoglycerate dehydrogenase; oxidored	95.25
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	95.23
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	95.23
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	95.23
2dc1_A	236	L-aspartate dehydrogenase; NAD, oxidoreductase; HE	95.2
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	95.2
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	95.2
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	95.16
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	95.14
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	95.13
3euw_A	344	MYO-inositol dehydrogenase; protein structure init	95.13
3e9m_A	330	Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA,	95.13
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	95.11
3uuw_A	308	Putative oxidoreductase with NAD(P)-binding rossm	95.1

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=100.00  E-value=6.7e-67  Score=505.50  Aligned_cols=308  Identities=54%  Similarity=0.843  Sum_probs=272.8

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhC-CCCcEEEEEeCCC-chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~-~~~~el~L~D~~~-~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      |||+||||+|.||+++++.|+++ ++..||+|+|+++ +.|.++||+|......++.+.+ ++.+++++|||+||+++|.
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~~~~~~~v~~~~~-~~~~~~~~~aDivii~ag~   79 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSG-EDATPALEGADVVLISAGV   79 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHTSCSSEEEEEECS-SCCHHHHTTCSEEEECCSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHhhCCCCCceEEEecC-CCcHHHhCCCCEEEEeCCC
Confidence            69999997799999999999987 8889999999997 7899999999865445665432 3446899999999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCC-CCCcEEEechhcHHHHHHHH
Q 017551           99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY-DPKKLLGVTMLDVVRANTFV  177 (369)
Q Consensus        99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~-~~~kviG~t~Ld~~R~~~~l  177 (369)
                      ||+|||+|+|++.+|++++++++++|.++||+++++++|||+|++|++++|+++ .+++ |++||||+|.||++|++++|
T Consensus        80 ~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtNPvd~~t~~a~~~~k-~sg~~p~~rv~G~~~LD~~R~~~~l  158 (312)
T 3hhp_A           80 ARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPVNTTVAIAAEVLK-KAGVYDKNKLFGVTTLDIIRSNTFV  158 (312)
T ss_dssp             SCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSSCHHHHHHHHHHHHH-HTTCCCTTSEEECCHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecCcchhHHHHHHHHHH-HcCCCCcceEEEEechhHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999877655 4566 99999999999999999999


Q ss_pred             HHHhCCCCCCCceeEEeecCCCccccccccCCCCCCCCHHHHHHHHhhhccchhhhhhhhccCCchhhHHHHHHHHHHHH
Q 017551          178 AEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADA  257 (369)
Q Consensus       178 a~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~s~A~a~~~li~a  257 (369)
                      |+++|++|++|+++|||||++.+++|+||++ ...++++++|+++.++|+++|+||+++|.|+|+++||+|+|+++++++
T Consensus       159 a~~lgv~~~~v~~~V~G~Hsg~t~vp~~S~~-~g~~~~~~~~~~i~~~v~~~g~eIi~~k~g~gst~~s~a~a~~~~~~a  237 (312)
T 3hhp_A          159 AELKGKQPGEVEVPVIGGHSGVTILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLS  237 (312)
T ss_dssp             HHHHTCCGGGCCCCEEECSSGGGEEECGGGC-TTCCCCHHHHHHHHHHHHTHHHHHHHHTTTSCCCCHHHHHHHHHHHHH
T ss_pred             HHHhCcChhHcceeEEeccCCCceeeecccC-CCCCCCHHHHHHHHHHHHhhhHHHHhhccCCCCchhHHHHHHHHHHHH
Confidence            9999999999999999999444899999998 333578899999999999999999998878899999999999999999


Q ss_pred             HHhccCCCCceeEEEeecCCCCCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHHHHhhhhhcccccccc
Q 017551          258 CLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWLGESEERVSWKHSKG  337 (369)
Q Consensus       258 i~~~~~~~~~v~~~~~~~g~~~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~l~~~~~~~~~~~~~~  337 (369)
                      |+++.++++.+++|++++|+...++|||+||++|++|+++++++++|+++|+++|++++    +.|++.       +++|
T Consensus       238 i~~~l~~~~~v~~~s~~~g~g~~~v~~s~P~~~g~~Gv~~v~~~~~L~~~E~~~l~~s~----~~l~~~-------i~~g  306 (312)
T 3hhp_A          238 LVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGML----DTLKKD-------IALG  306 (312)
T ss_dssp             HHHHHTTCSSCEEEEEEECCCSSCSEEEEEEEEETTEEEEECCCCCCCHHHHHHHHHHH----HHHHHH-------HHHH
T ss_pred             HHHHcCCCCceEEEEEecCCCCcceEEEeEEEEeCCEEEEEcCCCCCCHHHHHHHHHHH----HHHHHH-------HHHH
Confidence            96655556668899988876556899999999999999999996699999999999998    566665       6666


Q ss_pred             hHhHH
Q 017551          338 HLLQQ  342 (369)
Q Consensus       338 ~~~~~  342 (369)
                      ++|++
T Consensus       307 ~~~~~  311 (312)
T 3hhp_A          307 EEFVN  311 (312)
T ss_dssp             HHHHT
T ss_pred             HHHhh
Confidence            77754

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=100.00  E-value=1.4e-65  Score=497.44  Aligned_cols=312  Identities=56%  Similarity=0.912  Sum_probs=284.7

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  100 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p~  100 (369)
                      |||+||||+|++|++++..|++++++.+|+|+|+++.++.++||.|.....+++.+.+++|+++|++|||+||+++|.|+
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag~~~   80 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPR   80 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCCcCC
Confidence            69999998899999999999999888899999999888899999998755567765445688889999999999999999


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEechhcHHHHHHHHHHH
Q 017551          101 KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEV  180 (369)
Q Consensus       101 k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t~Ld~~R~~~~la~~  180 (369)
                      ++|++|.|++.+|++++++++++|.++||++|++++|||+|++++++++++++.++||++||||+|+||+.|+++++|++
T Consensus        81 ~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~~~~~~~~~~~p~~rvig~t~Ld~~r~~~~la~~  160 (314)
T 1mld_A           81 KPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPVNSTIPITAEVFKKHGVYNPNKIFGVTTLDIVRANAFVAEL  160 (314)
T ss_dssp             CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSCHHHHHHHHHHHHHHTTCCCTTSEEECCHHHHHHHHHHHHHH
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCCcchhHHHHHHHHHHcCCCCcceEEEeecccHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hCCCCCCCceeEEeec-CCCccccccccCCCCCCCCHHHHHHHHhhhccchhhhhhhhccCCchhhHHHHHHHHHHHHHH
Q 017551          181 LGLDPRDVDVPVVGGH-AGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACL  259 (369)
Q Consensus       181 lgv~~~~V~~~viG~h-g~~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~s~A~a~~~li~ai~  259 (369)
                      +|++|++|+++||||| |+ +++|+||++++..++++++|+++.+++++++++|++.|.|+|+++|++|.++++++++|+
T Consensus       161 l~v~~~~v~~~v~G~H~G~-~~~p~~s~~~~~~~~~~~~~~~~~~~v~~~g~eii~~k~~~g~t~~~~a~a~~~~~~ai~  239 (314)
T 1mld_A          161 KGLDPARVSVPVIGGHAGK-TIIPLISQCTPKVDFPQDQLSTLTGRIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLV  239 (314)
T ss_dssp             TTCCGGGCBCCEEECSSGG-GEEECGGGCBSCCCCCHHHHHHHHHHHHHHHHHHHHHHTTSCSCCHHHHHHHHHHHHHHH
T ss_pred             hCcChHhEEEEEccCCCCC-cEeeecccCCCcccCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcchhHHHHHHHHHHHHH
Confidence            9999999999999999 66 899999999865468888999999999999999999888889999999999999999999


Q ss_pred             hccCCCCceeEEEeecCCCCCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHHHHhhhhhcccccccchH
Q 017551          260 RGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWLGESEERVSWKHSKGHL  339 (369)
Q Consensus       260 ~~~~~~~~v~~~~~~~g~~~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~l~~~~~~~~~~~~~~~~  339 (369)
                      +|+++++.++++++++|+|++++|||+||++|++|+++++++++|+++|+++|++++    +.|++.       ++++.+
T Consensus       240 ~~~~g~~~v~~~~~~~g~y~~~~~~~~P~~ig~~Gv~~i~~l~~l~~~e~~~l~~s~----~~l~~~-------~~~~~~  308 (314)
T 1mld_A          240 DAMNGKEGVVECSFVKSQETDCPYFSTPLLLGKKGIEKNLGIGKISPFEEKMIAEAI----PELKAS-------IKKGEE  308 (314)
T ss_dssp             HHHHTCTTCEEEEEEECCSSSSSEEEEEEEEETTEEEEECCCCSCCHHHHHHHHHHH----HHHHHH-------HHHHHH
T ss_pred             cCcCCCcceEEEEEeCCccCCceEEEEEEEEeCCeeEEecCCCCCCHHHHHHHHHHH----HHHHHH-------HHHHHH
Confidence            998766568888999999988999999999999999999886699999999999999    455554       445566


Q ss_pred             hHHHh
Q 017551          340 LQQEM  344 (369)
Q Consensus       340 ~~~~~  344 (369)
                      |++++
T Consensus       309 ~~~~~  313 (314)
T 1mld_A          309 FVKNM  313 (314)
T ss_dssp             HHTTC
T ss_pred             HHhcc
Confidence            66543

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=100.00  E-value=6.5e-65  Score=494.90  Aligned_cols=297  Identities=22%  Similarity=0.344  Sum_probs=263.4

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC-CCeEEEEeCCCChhhhcCCCcEEE
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVI   93 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~-~~~v~~~~~t~dl~~al~~ADiVi   93 (369)
                      ..+.+||+|||| |.||+++++.++.++++++|+|+|+++  ++|+++||+|+.. ....... .++|+ ++++|||+||
T Consensus        16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~-~~~d~-~~~~~aDiVv   92 (331)
T 4aj2_A           16 QVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIV-SSKDY-SVTANSKLVI   92 (331)
T ss_dssp             -CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEE-ECSSG-GGGTTEEEEE
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEE-EcCCH-HHhCCCCEEE
Confidence            456789999999 999999999999999999999999987  6899999999852 2222222 24676 5899999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHH
Q 017551           94 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVR  172 (369)
Q Consensus        94 i~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R  172 (369)
                      +++|.||+|||+|+|++.+|++++++++++|+++||++|++++|||+|++|+++    ++.+++|++|+||+ |+||++|
T Consensus        93 i~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNPvdi~t~~~----~k~sg~p~~rviG~gt~LD~~R  168 (331)
T 4aj2_A           93 ITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNPVDILTYVA----WKISGFPKNRVIGSGCNLDSAR  168 (331)
T ss_dssp             ECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHH----HHHHCCCGGGEEECTTHHHHHH
T ss_pred             EccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecChHHHHHHHH----HHHhCCCHHHEEeeccccHHHH
Confidence            999999999999999999999999999999999999999999999999998654    78889999999999 9999999


Q ss_pred             HHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCC------------CCCHHHHHHHHhhhccchhhhhhhhccC
Q 017551          173 ANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC------------SFTQEETEYLTNRIQNGGTEVVEAKAGA  240 (369)
Q Consensus       173 ~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~------------~~~~~~~~~l~~~v~~~~~ev~~~k~g~  240 (369)
                      +++++|+++|++|++|+++||||||+ +++|+||++++.+            .+++++|+++.++++++|+||+++|   
T Consensus       169 ~~~~la~~lgv~~~~V~~~ViGeHG~-s~vp~~S~~~v~G~p~~~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~k---  244 (331)
T 4aj2_A          169 FRYLMGERLGVHPLSCHGWVLGEHGD-SSVPVWSGVNVAGVSLKSLNPQLGTDADKEQWKDVHKQVVDSAYEVIKLK---  244 (331)
T ss_dssp             HHHHHHHHHTSCGGGCBCCEEBCSST-TCEECGGGCEETTEEHHHHCTTTTSTTCTTCTHHHHHHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHhCCCHHHCEEeEEecCCC-ceeEeeecCeECCEEHHHHHhhccCCCCHHHHHHHHHHHHHhHHHHhhcC---
Confidence            99999999999999999999999998 9999999998632            2356789999999999999999965   


Q ss_pred             CchhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC--CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHH
Q 017551          241 GSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHL  317 (369)
Q Consensus       241 g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~  317 (369)
                      |+++|++|+++++++++|+++.+   .+++++ +++|+|  ++++|||+||++|++|+++++++ +|+++|+++|++++ 
T Consensus       245 g~t~~a~a~a~a~~~~ail~d~~---~~~~vs~~~~g~ygi~~~v~~s~P~~lg~~Gv~~iv~l-~L~~~E~~~l~~s~-  319 (331)
T 4aj2_A          245 GYTSWAIGLSVADLAESIMKNLR---RVHPISTMIKGLYGIKEDVFLSVPCILGQNGISDVVKV-TLTPDEEARLKKSA-  319 (331)
T ss_dssp             SSCCHHHHHHHHHHHHHHHTTCC---EEEEEEEECTTGGGCCSCCEEEEEEEEETTEEEEEECC-CCCHHHHHHHHHHH-
T ss_pred             CCCchhHHHHHHHHHHHHHhCCC---CeEEEEEecCCccCCcCceEEEEEEEEcCCeeEEEccC-CCCHHHHHHHHHHH-
Confidence            88999999999999999999865   477775 889998  57999999999999999999995 99999999999999 


Q ss_pred             HHHHHHHhhhhhccc
Q 017551          318 CFQDWLGESEERVSW  332 (369)
Q Consensus       318 ~i~~~l~~~~~~~~~  332 (369)
                         +.|++.+++++|
T Consensus       320 ---~~l~~~~~~~~~  331 (331)
T 4aj2_A          320 ---DTLWGIQKELQF  331 (331)
T ss_dssp             ---HHHHHHHTTCCC
T ss_pred             ---HHHHHHHhhcCC
Confidence               556666666554

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=100.00  E-value=3.5e-64  Score=482.16  Aligned_cols=280  Identities=23%  Similarity=0.354  Sum_probs=250.3

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC----CCeEEEEeCCCChhhhcCCCcEEEE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT----GAVVRGFLGQPQLENALTGMDLVII   94 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~----~~~v~~~~~t~dl~~al~~ADiVii   94 (369)
                      |||+|||| |+||+++++.|+++++++||+|||+++  ++|+++||+|+..    .+.+..   ++|+ ++++|||+||+
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~---~~d~-~~~~~aDvVvi   75 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVG---GADY-SLLKGSEIIVV   75 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEE---ESCG-GGGTTCSEEEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEec---CCCH-HHhCCCCEEEE
Confidence            79999998 999999999999999999999999998  7899999999652    233433   4565 78999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHH
Q 017551           95 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA  173 (369)
Q Consensus        95 ~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~  173 (369)
                      +||.||||||+|+|++..|+++++++++++.++||+++++++|||+|++|+++    ++.+|+|++|+||+ |.||++||
T Consensus        76 tAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsNPvd~~t~i~----~k~sg~p~~rvig~gT~LDs~R~  151 (294)
T 2x0j_A           76 TAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPMDVMTYIM----WKESGKPRNEVFGMGNQLDSQRL  151 (294)
T ss_dssp             CCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSHHHHHHHH----HHHSSCCTTSEEECCHHHHHHHH
T ss_pred             ecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCcchhhHHhh----HHHcCCChhhEEEeeeEEeHHHH
Confidence            99999999999999999999999999999999999999999999999999875    78899999999999 89999999


Q ss_pred             HHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCCCCCHHHHHHHHhhhccchhhhhhhhccCCchhhHHHHHHHH
Q 017551          174 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVK  253 (369)
Q Consensus       174 ~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~s~A~a~~~  253 (369)
                      +++|++++++++.  +++|||+||+ +++|+||++++.+.   .+++++.++++.+|+||++.|   |+++|++|+++++
T Consensus       152 ~~~l~~~~~~~~~--~~~V~G~HGd-t~vp~~S~~~v~g~---~~~~~i~~~~~~~g~eIi~~k---Gst~~a~a~a~~~  222 (294)
T 2x0j_A          152 KERLYNAGARNIR--RAWIIGEHGD-SMFVAKSLADFDGE---VDWEAVENDVRFVAAEVIKRK---GATIFGPAVAIYR  222 (294)
T ss_dssp             HHHHHHTTCEEEC--CCCEEBCSST-TCEECGGGCCEESC---CCHHHHHHHHHTHHHHHHHHH---SSCCHHHHHHHHH
T ss_pred             HHHHhhcccCCcc--eeEEEecCCC-cEEEeeeccCCCCc---hhHHHHHHHHhhhheEEEecC---cccchhHHHHHHH
Confidence            9999999987654  6899999999 99999999998543   246778889999999999965   8999999999999


Q ss_pred             HHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 017551          254 FADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWL  323 (369)
Q Consensus       254 li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~l  323 (369)
                      ++++|+++.+   .+++++ +++|+| .+++|||+||+||++|++ ++++ +|+++|+++|++++..+++.+
T Consensus       223 ~~~ail~d~~---~v~~~s~~l~g~yG~~~v~~s~P~~lg~~Gve-i~~l-~L~~~E~~~l~~s~~~lk~~i  289 (294)
T 2x0j_A          223 MVKAVVEDTG---EIIPTSMILQGEYGIENVAVGVPAKLGKNGAE-VADI-KLSDEEIEKLRNSAKILRERL  289 (294)
T ss_dssp             HHHHHHTTCC---CEEEEEEEEESGGGCEEEEEEEEEEEETTEEE-ECCC-CCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCC---cEEEEEEEEecCCCCccEEEEEEEEEeCCEEE-EeCC-CCCHHHHHHHHHHHHHHHHHH
Confidence            9999999865   488886 789999 679999999999999985 7885 999999999999995544443

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=100.00  E-value=1.3e-62  Score=478.82  Aligned_cols=313  Identities=85%  Similarity=1.251  Sum_probs=280.7

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      ++++|||+||||+|++|++++..|+.++++.+|+|+|+++..+.++||.|......+..+.+++|++++++|||+||+++
T Consensus         5 ~~~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~a   84 (326)
T 1smk_A            5 GAPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPA   84 (326)
T ss_dssp             ---CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECC
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcC
Confidence            35678999999779999999999999887789999999877788899998764346665444568889999999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEechhcHHHHHHH
Q 017551           97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTF  176 (369)
Q Consensus        97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t~Ld~~R~~~~  176 (369)
                      |.|+++|++|.+++.+|+++++++++++.+++|++|++++|||+|++|+++++++++.++||++||||+|+||+.|++++
T Consensus        85 g~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SNPv~~~~~~~t~~~~~~~~~p~~rviG~~~Ld~~r~~~~  164 (326)
T 1smk_A           85 GVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTMLDVVRANTF  164 (326)
T ss_dssp             CCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHHHHHHTCCCTTSEEECCHHHHHHHHHH
T ss_pred             CcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCchHHHHHHHHHHHHHccCCCcccEEEEeehHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCceeEEeec-CCCccccccccCCCCCCCCHHHHHHHHhhhccchhhhhhhhccCCchhhHHHHHHHHHH
Q 017551          177 VAEVLGLDPRDVDVPVVGGH-AGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFA  255 (369)
Q Consensus       177 la~~lgv~~~~V~~~viG~h-g~~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~s~A~a~~~li  255 (369)
                      ||+++|++|++|+++||||| |+ +++|+||++++...+++++++++.+++++++++|++.|.|+|+++||+|+++++++
T Consensus       165 la~~l~v~~~~v~~~v~G~H~G~-~~~p~~s~~~v~~~~~~~~~~~~~~~v~~~g~eii~~k~~~gs~~~~~a~a~~~~~  243 (326)
T 1smk_A          165 VAEVLGLDPRDVDVPVVGGHAGV-TILPLLSQVKPPSSFTQEEISYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFA  243 (326)
T ss_dssp             HHHHHTCCGGGCBCCEEECSSGG-GEEECGGGCBSCCCCCHHHHHHHHHHHHHHHHHHHHHTTTSCCCCHHHHHHHHHHH
T ss_pred             HHHHhCcChhheEEEEecccCCc-eEEEecccCeecCcCCHHHHHHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHH
Confidence            99999999999999999999 66 89999999988666888899999999999999999987788999999999999999


Q ss_pred             HHH---HhccCCCCceeEEEeecCCCCCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHHHHhhhhhccc
Q 017551          256 DAC---LRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWLGESEERVSW  332 (369)
Q Consensus       256 ~ai---~~~~~~~~~v~~~~~~~g~~~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~l~~~~~~~~~  332 (369)
                      ++|   ++|.+   .++++++++|++++++|||+||++|++|+++++.+++|+++|+++|++++    +.|++.      
T Consensus       244 ~ai~~~~~~~~---~v~~~~~~~g~~~~~~~~~vP~~ig~~Gv~~i~~~~~L~~~e~~~l~~s~----~~l~~~------  310 (326)
T 1smk_A          244 DACLRGLRGDA---GVIECAFVSSQVTELPFFASKVRLGRNGIEEVYSLGPLNEYERIGLEKAK----KELAGS------  310 (326)
T ss_dssp             HHHHHHHHTCS---CEEEEEEEECCSSSSSEEEEEEEEETTEEEEECCCCCCCHHHHHHHHHHH----HHHHHH------
T ss_pred             HHHHHHhCCCC---eEEEEEeeccccCCceEEEEEEEEeCCeeEEEcCCCCCCHHHHHHHHHHH----HHHHHH------
Confidence            999   76654   48888888998898999999999999999999984599999999999999    555555      


Q ss_pred             ccccchHhHHHh
Q 017551          333 KHSKGHLLQQEM  344 (369)
Q Consensus       333 ~~~~~~~~~~~~  344 (369)
                       ++++.+|++++
T Consensus       311 -~~~~~~~~~~~  321 (326)
T 1smk_A          311 -IEKGVSFIRSH  321 (326)
T ss_dssp             -HHHHHHHHCC-
T ss_pred             -HHHHHHHHHhh
Confidence             55567777664

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=100.00  E-value=4.1e-62  Score=468.57  Aligned_cols=281  Identities=22%  Similarity=0.344  Sum_probs=253.7

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhccc--C--CCeEEEEeCCCChhhhcCCCcEEEE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD--T--GAVVRGFLGQPQLENALTGMDLVII   94 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~--~--~~~v~~~~~t~dl~~al~~ADiVii   94 (369)
                      |||+|||| |.+|+++++.|++++++++|+|+|+++  ++++++||.|..  .  ..++..   ++| +++++|||+||+
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~---t~d-~~a~~~aDiVVi   75 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVG---GAD-YSLLKGSEIIVV   75 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEE---ESC-GGGGTTCSEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEE---eCC-HHHhCCCCEEEE
Confidence            79999999 999999999999999889999999988  678899999875  2  234443   356 689999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHH
Q 017551           95 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA  173 (369)
Q Consensus        95 ~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~  173 (369)
                      ++|.||+|||+|+|++.+|++++++++++|.++||+++++++|||+|++|+++    ++.++||++||||+ |.||++|+
T Consensus        76 aag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsNPvd~~t~~~----~k~~g~p~~rviG~gt~LD~~R~  151 (294)
T 1oju_A           76 TAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPMDVMTYIM----WKESGKPRNEVFGMGNQLDSQRL  151 (294)
T ss_dssp             CCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSHHHHHHHH----HHHSCCCTTSEEECSHHHHHHHH
T ss_pred             CCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcchHHHHHH----HHhcCCCHHHEeecccccHHHHH
Confidence            99999999999999999999999999999999999999999999999998654    78899999999999 89999999


Q ss_pred             HHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCCCCCHHHHHHHHhhhccchhhhhhhhccCCchhhHHHHHHHH
Q 017551          174 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVK  253 (369)
Q Consensus       174 ~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~s~A~a~~~  253 (369)
                      +++|| ++|++|++ +++||||||+ +++|+||++++.+ .+  +++++.++++++|+||+++|   |+++||+|+++++
T Consensus       152 ~~~la-~l~v~~~~-~~~V~G~Hg~-t~vp~~s~~~v~g-~~--~~~~~~~~v~~~g~eii~~k---G~t~~~~a~a~~~  222 (294)
T 1oju_A          152 KERLY-NAGARNIR-RAWIIGEHGD-SMFVAKSLADFDG-EV--DWEAVENDVRFVAAEVIKRK---GATIFGPAVAIYR  222 (294)
T ss_dssp             HHHHH-HTTCBSCC-CCCEEBCSST-TCEECGGGCCCBS-CC--CHHHHHHHHHTTHHHHHHHH---SSCCHHHHHHHHH
T ss_pred             HHHHH-HhCCCccC-ceEEEecCCC-ceeeecccceECC-cC--hHHHHHHHHHHHHHHHHHhc---CCcchHHHHHHHH
Confidence            99999 99999999 9999999998 9999999999853 22  68899999999999999965   8999999999999


Q ss_pred             HHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHHHH
Q 017551          254 FADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWLG  324 (369)
Q Consensus       254 li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~l~  324 (369)
                      ++++|+++.+   .+++|+ +++|+| .+++|||+||++|++|++ ++++ +|+++|+++|++++..+++.++
T Consensus       223 ~~~ail~~~~---~v~~~s~~~~g~yg~~~~~~s~P~~~g~~Gv~-v~~l-~L~~~E~~~l~~s~~~l~~~~~  290 (294)
T 1oju_A          223 MVKAVVEDTG---EIIPTSMILQGEYGIENVAVGVPAKLGKNGAE-VADI-KLSDEEIEKLRNSAKILRERLE  290 (294)
T ss_dssp             HHHHHHTTCC---CEEEEEEEEESGGGCEEEEEEEEEEEETTEEE-ECCC-CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCC---eEEEEEecccccCCCCceEEEEEEEEeCCEEE-EecC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999754   488886 899999 559999999999999999 9986 9999999999999955544443

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=100.00  E-value=2.7e-63  Score=482.61  Aligned_cols=288  Identities=22%  Similarity=0.356  Sum_probs=242.6

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC-CCeEEEEeCCCChhhhcCCCcEEEE
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVII   94 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~-~~~v~~~~~t~dl~~al~~ADiVii   94 (369)
                      ++.+||+|||| |.||+++++.|++++++++|+|+|+++  ++|+++||+|... ...++.++  ++ +++++|||+||+
T Consensus         7 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~--~~-~~a~~~aDiVvi   82 (326)
T 3vku_A            7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYS--AE-YSDAKDADLVVI   82 (326)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE--CC-GGGGTTCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEE--Cc-HHHhcCCCEEEE
Confidence            45679999998 999999999999999999999999987  6899999999763 23455443  34 578999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHH
Q 017551           95 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA  173 (369)
Q Consensus        95 ~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~  173 (369)
                      ++|.||+|||+|+|++.+|++++++++++|.++||++|++++|||+|++|+++    +++++||++||||+ |+||++|+
T Consensus        83 ~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtNPvdi~t~~~----~k~~g~p~~rviG~gt~LD~~R~  158 (326)
T 3vku_A           83 TAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVDILTYAT----WKLSGFPKNRVVGSGTSLDTARF  158 (326)
T ss_dssp             CCCCC----------------CHHHHHHHHHTTTCCSEEEECSSSHHHHHHHH----HHHHCCCGGGEEECTTHHHHHHH
T ss_pred             CCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccCchHHHHHHH----HHhcCCCHHHeeeecccCcHHHH
Confidence            99999999999999999999999999999999999999999999999998654    78899999999999 99999999


Q ss_pred             HHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCCC-----------CCHHHHHHHHhhhccchhhhhhhhccCCc
Q 017551          174 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCS-----------FTQEETEYLTNRIQNGGTEVVEAKAGAGS  242 (369)
Q Consensus       174 ~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~~-----------~~~~~~~~l~~~v~~~~~ev~~~k~g~g~  242 (369)
                      ++++|+++|++|++|+++||||||+ +++|+||++++.+.           +++++++++.++++++|+||++.|   |+
T Consensus       159 ~~~la~~lgv~~~~V~~~ViGeHGd-t~vp~~S~a~v~g~pl~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~k---G~  234 (326)
T 3vku_A          159 RQSIAKMVNVDARSVHAYIMGEHGD-TEFPVWSHANIGGVTIAEWVKAHPEIKEDKLVKMFEDVRNKAYEIIKLK---GA  234 (326)
T ss_dssp             HHHHHHHHTSCGGGEECCEEBSSST-TCEECGGGCEETTEEHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHH---SC
T ss_pred             HHHHHHHhCCCHHHCeEEEEcCCCC-eeEEeeeccccCCEEHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhcC---CC
Confidence            9999999999999999999999998 99999999987531           156678999999999999999954   89


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHH
Q 017551          243 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQ  320 (369)
Q Consensus       243 ~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~  320 (369)
                      ++||+|+++++++++|+++.+   .+++++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++++..++
T Consensus       235 t~~a~a~a~~~~~~ail~~~~---~v~~~s~~~~g~yg~~~v~~s~P~~lg~~Gv~~iv~l-~L~~~E~~~l~~sa~~L~  310 (326)
T 3vku_A          235 TFYGIATALARISKAILNDEN---AVLPLSVYMDGQYGLNDIYIGTPAVINRNGIQNILEI-PLTDHEEESMQKSASQLK  310 (326)
T ss_dssp             CCHHHHHHHHHHHHHHHTTCC---EEEEEEEEEEEGGGEEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHhcCCC---ceEEEEeeccCccCCCceEEEEEEEEcCCceEEEecC-CCCHHHHHHHHHHHHHHH
Confidence            999999999999999999743   588875 899999 56999999999999999999996 999999999999994443


Q ss_pred             H
Q 017551          321 D  321 (369)
Q Consensus       321 ~  321 (369)
                      +
T Consensus       311 ~  311 (326)
T 3vku_A          311 K  311 (326)
T ss_dssp             C
T ss_pred             H
Confidence            3

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=100.00  E-value=8.3e-63  Score=477.27  Aligned_cols=292  Identities=26%  Similarity=0.440  Sum_probs=254.7

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC--CCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~--~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      |||+|||| |.||+++++.+++++++++|+|+|+++  ++|+++||+|+..  ....+... +++ +++++|||+||+++
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~-~~~-~~a~~~aDvVii~a   77 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTG-TND-YGPTEDSDVCIITA   77 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEE-ESS-SGGGTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEE-CCC-HHHhCCCCEEEECC
Confidence            79999998 999999999999999989999999988  6899999999752  12233321 234 58999999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEec-hhcHHHHHH
Q 017551           97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVRANT  175 (369)
Q Consensus        97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t-~Ld~~R~~~  175 (369)
                      |.||+|||+|+|++.+|++++++++++|.++||++|++++|||+|++|+++    ++.++||++||||+| .||++|+++
T Consensus        78 g~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPvd~~t~~~----~k~~g~p~~rviG~~t~LD~~R~~~  153 (314)
T 3nep_X           78 GLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVANPLDVMTYVA----YEASGFPTNRVMGMAGVLDTGRFRS  153 (314)
T ss_dssp             CC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCSSHHHHHHHH----HHHHTCCGGGEEECCHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCCchhHHHHHH----HHhcCCChHHEEeecCchHHHHHHH
Confidence            999999999999999999999999999999999999999999999999875    567899999999995 899999999


Q ss_pred             HHHHHhCCCCCCCceeEEeecCCCccccccccCCCCC----C-CCHHHHHHHHhhhccchhhhhhhhccCCchhhHHHHH
Q 017551          176 FVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----S-FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYA  250 (369)
Q Consensus       176 ~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~----~-~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~s~A~a  250 (369)
                      ++|+++|++|++|+++||||||+ +++|+||++++.+    + +++++++++.++++++|+||+++| |+ +++|++|++
T Consensus       154 ~la~~lgv~~~~v~~~ViG~Hg~-t~vp~~S~~~v~g~p~~~~~~~~~~~~i~~~v~~~g~eIi~~k-g~-sa~~a~a~a  230 (314)
T 3nep_X          154 FIAEELDVSVRDVQALLMGGHGD-TMVPLPRYTTVGGIPVPQLIDDARIEEIVERTKGAGGEIVDLM-GT-SAWYAPGAA  230 (314)
T ss_dssp             HHHHHHTCCGGGEEEEEEESSGG-GEEEEEEEEEETTEEGGGTSCHHHHHHHHHHHHTHHHHHHHHH-SS-CCCHHHHHH
T ss_pred             HHHHHhCcCHHHeEEEEECCCCC-cEEeeeecCeECcEehhhccCHHHHHHHHHHHHHhHHHHHhcc-CC-cHHHHHHHH
Confidence            99999999999999999999999 9999999998753    1 467778999999999999999987 44 899999999


Q ss_pred             HHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHHHHhh
Q 017551          251 AVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWLGES  326 (369)
Q Consensus       251 ~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~l~~~  326 (369)
                      +++++++|+++.+   .+++|+ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++++..+++.+++.
T Consensus       231 ~~~~~~ail~~~~---~v~~~s~~~~g~yg~~~~~~s~P~~lg~~Gv~~v~~l-~L~~~E~~~l~~s~~~l~~~~~~~  304 (314)
T 3nep_X          231 AAEMTEAILKDNK---RILPCAAYCDGEYGLDDLFIGVPVKLGAGGVEEVIEV-DLDADEKAQLKTSAGHVHSNLDDL  304 (314)
T ss_dssp             HHHHHHHHHHTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCC---eEEEEEEEeccccCCCceEEEEEEEEeCCEEEEecCC-CCCHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999754   488886 899999 67999999999999999999996 999999999999997666666555

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=100.00  E-value=5e-62  Score=472.15  Aligned_cols=290  Identities=29%  Similarity=0.443  Sum_probs=260.9

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCC--C--chhHHHHhhccc----CCCeEEEEeCCCChhhhcCCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV--N--TPGVTADISHMD----TGAVVRGFLGQPQLENALTGM   89 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~--~--~~g~~~dL~~~~----~~~~v~~~~~t~dl~~al~~A   89 (369)
                      .+.+||+|||| |.+|+++++.+++.++ ++|+|+|++  +  ++|.++||.|..    ...++..   ++| +++++||
T Consensus         6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g~-~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~---t~d-~~a~~~a   79 (315)
T 3tl2_A            6 IKRKKVSVIGA-GFTGATTAFLLAQKEL-ADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIG---TSD-YADTADS   79 (315)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTC-CEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEE---ESC-GGGGTTC
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCC-CeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEE---cCC-HHHhCCC
Confidence            34579999999 9999999999999998 899999999  4  678899999874    2345554   345 4799999


Q ss_pred             cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chh
Q 017551           90 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TML  168 (369)
Q Consensus        90 DiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~L  168 (369)
                      |+||+++|.||+|||+|+|++.+|+++++++++++.++||++|++++|||+|++|+++    ++.++||++|+||+ |+|
T Consensus        80 DvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsNPvd~~t~~~----~k~sg~p~~rviG~gt~L  155 (315)
T 3tl2_A           80 DVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTNPVDAMTYSV----FKEAGFPKERVIGQSGVL  155 (315)
T ss_dssp             SEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHH----HHHHCCCGGGEEECCHHH
T ss_pred             CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCChHHHHHHHH----HHhcCCChHHEEeeccCc
Confidence            9999999999999999999999999999999999999999999999999999999875    56789999999999 999


Q ss_pred             cHHHHHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCC----C-CCHHHHHHHHhhhccchhhhhhhhccCCch
Q 017551          169 DVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----S-FTQEETEYLTNRIQNGGTEVVEAKAGAGSA  243 (369)
Q Consensus       169 d~~R~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~----~-~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~  243 (369)
                      |+.|++++||+++|++|++|+++||||||+ +++|+||++++.+    + +++++++++.++++++|+||+++ .|+|++
T Consensus       156 D~~R~~~~la~~lgv~~~~v~~~viG~Hg~-t~vp~~S~~~v~g~p~~~~~~~~~~~~i~~~v~~~g~eii~~-~~kgst  233 (315)
T 3tl2_A          156 DTARFRTFIAQELNLSVKDITGFVLGGHGD-DMVPLVRYSYAGGIPLETLIPKERLEAIVERTRKGGGEIVGL-LGNGSA  233 (315)
T ss_dssp             HHHHHHHHHHHHHTCCGGGEECCEEBCSGG-GCEECGGGCEETTEEGGGTSCHHHHHHHHHHHHTHHHHHHHH-HSSSCC
T ss_pred             HHHHHHHHHHHHhCcCHHHceeeEecCCCC-cceeecccCeECCEEHHHhCCHHHHHHHHHHHHHHHHHHHHh-cCCCcc
Confidence            999999999999999999999999999999 9999999998753    2 56778899999999999999997 378999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHH
Q 017551          244 TLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQD  321 (369)
Q Consensus       244 ~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~  321 (369)
                      +||+|+++++++++|+++.+   .+++++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++++..+++
T Consensus       234 ~~a~a~a~~~~~~ail~~~~---~v~~~s~~~~g~yg~~~~~~s~P~~~g~~Gv~~v~~l-~L~~~E~~~l~~s~~~l~~  309 (315)
T 3tl2_A          234 YYAPAASLVEMTEAILKDQR---RVLPAIAYLEGEYGYSDLYLGVPVILGGNGIEKIIEL-ELLADEKEALDRSVESVRN  309 (315)
T ss_dssp             CHHHHHHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHcCCC---cEEEEEEeccCccCCCceEEEEEEEEeCCEEEEEcCC-CCCHHHHHHHHHHHHHHHH
Confidence            99999999999999999743   588886 899999 67999999999999999999996 9999999999999954444


Q ss_pred             HH
Q 017551          322 WL  323 (369)
Q Consensus       322 ~l  323 (369)
                      .+
T Consensus       310 ~~  311 (315)
T 3tl2_A          310 VM  311 (315)
T ss_dssp             HH
T ss_pred             HH
Confidence            33

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=100.00  E-value=1.9e-62  Score=477.08  Aligned_cols=291  Identities=23%  Similarity=0.326  Sum_probs=259.9

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCC--CeEEEEeCCCChhhhcCCCcEEE
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG--AVVRGFLGQPQLENALTGMDLVI   93 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~--~~v~~~~~t~dl~~al~~ADiVi   93 (369)
                      ++.+||+|||| |.||+++++.|++.+++++|+|+|+++  +.++++||+|....  ..++.++  ++ +++++|||+||
T Consensus         3 ~~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~--~~-~~a~~~aDvVv   78 (326)
T 3pqe_A            3 KHVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSY--GT-YEDCKDADIVC   78 (326)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEE--EC-GGGGTTCSEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEe--Cc-HHHhCCCCEEE
Confidence            45689999998 999999999999999889999999987  68999999997421  3455543  34 47999999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHH
Q 017551           94 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVR  172 (369)
Q Consensus        94 i~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R  172 (369)
                      +++|.||+|||+|.|++.+|+++++++++++.++||++|++++|||+|++|+++    ++.++||++||||+ |.||++|
T Consensus        79 i~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtNPvd~~t~~~----~k~~g~p~~rviG~gt~LD~~R  154 (326)
T 3pqe_A           79 ICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNPVDILTYAT----WKFSGLPKERVIGSGTTLDSAR  154 (326)
T ss_dssp             ECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHHH----HHHHCCCGGGEEECTTHHHHHH
T ss_pred             EecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCChHHHHHHHH----HHhcCCCHHHEEeeccccHHHH
Confidence            999999999999999999999999999999999999999999999999998654    77889999999999 9999999


Q ss_pred             HHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCCC-----------CCHHHHHHHHhhhccchhhhhhhhccCC
Q 017551          173 ANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCS-----------FTQEETEYLTNRIQNGGTEVVEAKAGAG  241 (369)
Q Consensus       173 ~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~~-----------~~~~~~~~l~~~v~~~~~ev~~~k~g~g  241 (369)
                      ++++||+++|++|++|+++||||||+ +++|+||++++.+.           +++++++++.++++++|+||++.|   |
T Consensus       155 ~~~~la~~lgv~~~~V~~~V~GeHG~-t~vp~~S~~~v~g~p~~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~k---G  230 (326)
T 3pqe_A          155 FRFMLSEYFGAAPQNVCAHIIGEHGD-TELPVWSHANVGGVPVSELVEKNDAYKQEELDQIVDDVKNAAYHIIEKK---G  230 (326)
T ss_dssp             HHHHHHHHHTCCGGGEECCEEBSSST-TCEECGGGCEETTEEHHHHHHTCTTSCHHHHHHHHHHHHHHHHHHHHHH---S
T ss_pred             HHHHHHHHhCCCHHHceeeeeecCCC-ceeeeeeeeeECCEEHHHHhhcccCCCHHHHHHHHHHHHhhhheeeeCC---C
Confidence            99999999999999999999999998 99999999987531           256778999999999999999955   8


Q ss_pred             chhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHH
Q 017551          242 SATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCF  319 (369)
Q Consensus       242 ~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i  319 (369)
                      +++||+|+|+++++++|++|.+   .+++++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++++..+
T Consensus       231 ~t~~a~a~a~~~~~~ail~~~~---~v~~~s~~~~g~yg~~~v~~s~P~~lg~~Gv~~iv~l-~L~~~E~~~l~~s~~~l  306 (326)
T 3pqe_A          231 ATYYGVAMSLARITKAILHNEN---SILTVSTYLDGQYGADDVYIGVPAVVNRGGIAGITEL-NLNEKEKEQFLHSAGVL  306 (326)
T ss_dssp             CCCHHHHHHHHHHHHHHHTTCC---EEECCEEEEESGGGCEEEEEECCEEEETTEEEEECCC-CCCHHHHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHhcCCC---cEEEEEEeeccccCCCceEEEEEEEEcCCceEEEecC-CCCHHHHHHHHHHHHHH
Confidence            9999999999999999998743   588875 899999 56999999999999999999996 99999999999999544


Q ss_pred             HHHHH
Q 017551          320 QDWLG  324 (369)
Q Consensus       320 ~~~l~  324 (369)
                      ++.++
T Consensus       307 ~~~~~  311 (326)
T 3pqe_A          307 KNILK  311 (326)
T ss_dssp             HHHHT
T ss_pred             HHHHH
Confidence            44443

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=100.00  E-value=1.9e-61  Score=469.38  Aligned_cols=291  Identities=32%  Similarity=0.495  Sum_probs=262.1

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC----CCeEEEEeCCCChhhhcCCCcEE
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT----GAVVRGFLGQPQLENALTGMDLV   92 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~----~~~v~~~~~t~dl~~al~~ADiV   92 (369)
                      +.+||+|||| |.+|+++++.|+++++. +|+|+|+++  +++.++||+|...    ..++..   ++|+ ++++|||+|
T Consensus         4 ~~~kI~iiGa-G~vG~~~a~~l~~~~~~-~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~---t~d~-~a~~~aDvV   77 (321)
T 3p7m_A            4 ARKKITLVGA-GNIGGTLAHLALIKQLG-DVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRG---TNDY-KDLENSDVV   77 (321)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCC-EEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE---ESCG-GGGTTCSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCc-eEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEE---cCCH-HHHCCCCEE
Confidence            4579999998 99999999999999987 999999998  5789999999752    344543   3464 799999999


Q ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEec-hhcHH
Q 017551           93 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVV  171 (369)
Q Consensus        93 ii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t-~Ld~~  171 (369)
                      |+++|.||+|||+|.|++.+|++++++++++|.++||+++++++|||+|++|+++    ++++++|++||||+| .||++
T Consensus        78 Ii~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPvd~~t~~~----~k~sg~p~~rviG~~~~LD~~  153 (321)
T 3p7m_A           78 IVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITNPLDIMVNML----QKFSGVPDNKIVGMAGVLDSA  153 (321)
T ss_dssp             EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHH----HHHHCCCGGGEEEECHHHHHH
T ss_pred             EEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecCchHHHHHHH----HHhcCCCHHHEEeeccchHHH
Confidence            9999999999999999999999999999999999999999999999999998654    788899999999996 89999


Q ss_pred             HHHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCC----------CCCHHHHHHHHhhhccchhhhhhhhccCC
Q 017551          172 RANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEAKAGAG  241 (369)
Q Consensus       172 R~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~----------~~~~~~~~~l~~~v~~~~~ev~~~k~g~g  241 (369)
                      |++++||+++|++|++|+++||||||+ +++|+||++++.+          .+++++++++.++++++|+||+++| |+|
T Consensus       154 R~~~~la~~l~v~~~~v~~~v~G~HG~-t~~p~~s~~~v~g~p~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~~-g~g  231 (321)
T 3p7m_A          154 RFRTFLADELNVSVQQVQAYVMGGHGD-TMVPLTKMSNVAGVSLEQLVKEGKLKQERLDAIVSRTRSGGGEIVALL-KTG  231 (321)
T ss_dssp             HHHHHHHHHHTCCGGGEECCEEECSGG-GEEECTTTCEETTEEHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHHHH-SSS
T ss_pred             HHHHHHHHHhCcCHHHceEeeecCcCC-ceeeeeeeceECCEehhhhccccCCCHHHHHHHHHHHHhhhHHHHHhc-CCC
Confidence            999999999999999999999999998 9999999998743          1367788999999999999999987 889


Q ss_pred             chhhHHHHHHHHHHHHHHhccCCCCceeEEE-eec-CCC--CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHH
Q 017551          242 SATLSMAYAAVKFADACLRGLRGDAGVVECA-FVA-SQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHL  317 (369)
Q Consensus       242 ~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~-g~~--~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~  317 (369)
                      +++||+|+|+++++++|++|.+   .+++|+ +++ |+|  ++++|||+||++|++|++++ ++ +|+++|+++|++++.
T Consensus       232 sa~~~~a~a~~~~~~ail~~~~---~v~~~s~~~~~g~ygi~~~v~~s~P~~~g~~Gv~~v-~l-~L~~~E~~~l~~s~~  306 (321)
T 3p7m_A          232 SAYYAPAAAGIQMAESFLKDKK---MILPCAAKVKAGMYGLDEDLFVGVPTEISANGVRPI-EV-EISDKEREQLQVSIN  306 (321)
T ss_dssp             CCCHHHHHHHHHHHHHHHTTCC---EEEEEEEEECTTGGGCSSCEEEEEEEEEETTEEEEC-CC-CCCHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHcCCC---cEEEEEEEccCcccCCCCCeEEEEEEEEcCCEEEEe-CC-CCCHHHHHHHHHHHH
Confidence            9999999999999999999864   488886 788 888  56999999999999999999 85 999999999999997


Q ss_pred             HHHHHHHhh
Q 017551          318 CFQDWLGES  326 (369)
Q Consensus       318 ~i~~~l~~~  326 (369)
                      .+++.+++.
T Consensus       307 ~l~~~~~~~  315 (321)
T 3p7m_A          307 AIKDLNKAA  315 (321)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            666666555

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=100.00  E-value=7.2e-62  Score=472.57  Aligned_cols=294  Identities=30%  Similarity=0.462  Sum_probs=259.7

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC----CCeEEEEeCCCChhhhcCCCc
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT----GAVVRGFLGQPQLENALTGMD   90 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~----~~~v~~~~~t~dl~~al~~AD   90 (369)
                      ..+.+||+|||| |.+|+++++.|+++++. +|+|+|+++  +.+.++||.|...    ..++..   ++|+ ++++|||
T Consensus         4 ~m~~~kI~viGa-G~vG~~~a~~l~~~~~~-~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~---t~d~-~a~~~aD   77 (324)
T 3gvi_A            4 SMARNKIALIGS-GMIGGTLAHLAGLKELG-DVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG---ANDY-AAIEGAD   77 (324)
T ss_dssp             --CCCEEEEECC-SHHHHHHHHHHHHTTCC-EEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE---ESSG-GGGTTCS
T ss_pred             CCcCCEEEEECC-CHHHHHHHHHHHhCCCC-eEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEE---eCCH-HHHCCCC
Confidence            345679999999 99999999999999985 999999998  6788999999752    345554   3566 8999999


Q ss_pred             EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEec-hhc
Q 017551           91 LVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLD  169 (369)
Q Consensus        91 iVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t-~Ld  169 (369)
                      +||+++|.||+|||+|.|++.+|++++++++++|.++||++|++++|||+|++|+++    ++++++|++|+||+| .||
T Consensus        78 iVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtNPvd~~t~~~----~k~sg~p~~rviG~~~~LD  153 (324)
T 3gvi_A           78 VVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNPLDAMVWAL----QKFSGLPAHKVVGMAGVLD  153 (324)
T ss_dssp             EEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHH----HHHHCCCGGGEEECCHHHH
T ss_pred             EEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCCCcHHHHHHH----HHhcCCCHHHEEeecCccH
Confidence            999999999999999999999999999999999999999999999999999999765    778899999999997 799


Q ss_pred             HHHHHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCC----------CCCHHHHHHHHhhhccchhhhhhhhcc
Q 017551          170 VVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEAKAG  239 (369)
Q Consensus       170 ~~R~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~----------~~~~~~~~~l~~~v~~~~~ev~~~k~g  239 (369)
                      ++|++++||+++|++|++|+++||||||+ +++|+||++++.+          .+++++++++.++++++|+||+++| |
T Consensus       154 ~~R~~~~la~~lgv~~~~v~~~v~G~HG~-t~~p~~s~~~v~g~p~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~~-g  231 (324)
T 3gvi_A          154 SARFRYFLSEEFNVSVEDVTVFVLGGHGD-SMVPLARYSTVAGIPLPDLVKMGWTSQDKLDKIIQRTRDGGAEIVGLL-K  231 (324)
T ss_dssp             HHHHHHHHHHHHTCCGGGEECCEEECSGG-GEEECGGGCEETTEEHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHHHH-S
T ss_pred             HHHHHHHHHHHhCcCHHHCeEEEEcCCCC-ceeeehhhCeECCEEHHHhhhccCCCHHHHHHHHHHHHHhHHHHHHhc-C
Confidence            99999999999999999999999999998 9999999998743          1367788999999999999999987 8


Q ss_pred             CCchhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHH
Q 017551          240 AGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHL  317 (369)
Q Consensus       240 ~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~  317 (369)
                      +|+++||+|+|+++++++|++|.+   .+++|+ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++++.
T Consensus       232 kgsa~~~~a~a~~~~~~ail~~~~---~v~~~s~~~~g~yg~~~v~~s~P~~~g~~Gv~~v~~l-~L~~~E~~~l~~s~~  307 (324)
T 3gvi_A          232 TGSAFYAPAASAIQMAESYLKDKK---RVLPVAAQLSGQYGVKDMYVGVPTVIGANGVERIIEI-DLDKDEKAQFDKSVA  307 (324)
T ss_dssp             SCCCCHHHHHHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHHHHHHHHcCCC---cEEEEEEEecCccCCCceEEEEEEEEeCCEEEEecCC-CCCHHHHHHHHHHHH
Confidence            899999999999999999999864   488886 889999 56999999999999999999996 999999999999997


Q ss_pred             HHHHHHHhh
Q 017551          318 CFQDWLGES  326 (369)
Q Consensus       318 ~i~~~l~~~  326 (369)
                      .+++.+++.
T Consensus       308 ~l~~~~~~~  316 (324)
T 3gvi_A          308 SVAGLCEAC  316 (324)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            776666655

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=100.00  E-value=1.8e-61  Score=472.76  Aligned_cols=297  Identities=25%  Similarity=0.334  Sum_probs=255.3

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCC-CeEEEEeCCCChhhhcCCCcEEE
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG-AVVRGFLGQPQLENALTGMDLVI   93 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~-~~v~~~~~t~dl~~al~~ADiVi   93 (369)
                      +.+.+||+||||+|+||+++++.++..++..||+|+|+++  ++|.++||+|..+. .++..   ++|++++++|||+||
T Consensus         5 ~~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~---t~d~~~al~dADvVv   81 (343)
T 3fi9_A            5 YLTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF---TSDIKEALTDAKYIV   81 (343)
T ss_dssp             CSCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE---ESCHHHHHTTEEEEE
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE---cCCHHHHhCCCCEEE
Confidence            5567899999988999999999999999888999999987  68999999998642 34443   357889999999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeE-EEEecCCCCChhHHHHHHHHHhCCCCCCcEEEechhcHHH
Q 017551           94 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAT-VNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVR  172 (369)
Q Consensus        94 i~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~-viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t~Ld~~R  172 (369)
                      +++|.||+|||+|+|++.+|+++++++++++.++||+++ ++++|||+|++|+++    ++.++||++||+|+|.||++|
T Consensus        82 itaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsNPvd~~t~i~----~k~sg~p~~rv~g~t~LDs~R  157 (343)
T 3fi9_A           82 SSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNPADITGLVT----LIYSGLKPSQVTTLAGLDSTR  157 (343)
T ss_dssp             ECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSSSHHHHHHHH----HHHHTCCGGGEEEECCHHHHH
T ss_pred             EccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCchHHHHHHH----HHHcCCCcceEEEecCcHHHH
Confidence            999999999999999999999999999999999999997 899999999999876    667789999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCc-eeEEeecCCCccccccccCCCCC----------CCCHHHHHHHHhhhccchhhhhhhhccCC
Q 017551          173 ANTFVAEVLGLDPRDVD-VPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEAKAGAG  241 (369)
Q Consensus       173 ~~~~la~~lgv~~~~V~-~~viG~hg~~~~vp~~S~~~~~~----------~~~~~~~~~l~~~v~~~~~ev~~~k~g~g  241 (369)
                      |+++||+++|++|++|+ ++||||||+ +++|+||++++.+          .+++++|+++.++|+++|+||+++| | +
T Consensus       158 ~~~~la~~l~v~~~~v~~~~ViGeHgd-s~vp~~S~a~v~G~pl~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~k-g-~  234 (343)
T 3fi9_A          158 LQSELAKHFGIKQSLVTNTRTYGGHGE-QMAVFASTAKVNGTPLTDLIGTDKLTNEQWAELKQRVVKGGANIIKLR-G-R  234 (343)
T ss_dssp             HHHHHHHHHTSCGGGEECCCEEESSGG-GEEECGGGCEETTEEGGGTTTBTTBCHHHHHHHHHHHHTHHHHHHHHH-S-S
T ss_pred             HHHHHHHHhCcCHHHcccceEEEcCCC-ceeeeeecceECCEEhhHhccccCCCHHHHHHHHHHHHhhhHHHHHcc-C-C
Confidence            99999999999999996 899999999 9999999998742          1467889999999999999999976 2 3


Q ss_pred             chhhHHHHHHHHHHHHHHhccCCCCceeEE-EeecCCCCCccEEEEEEEEcCCCeEEEccCCC-CCHHHHHHHHHHHHHH
Q 017551          242 SATLSMAYAAVKFADACLRGLRGDAGVVEC-AFVASQVTELPFFASKVRLGRQGAEEIFQLGP-LNEYESGLFCLLHLCF  319 (369)
Q Consensus       242 ~~~~s~A~a~~~li~ai~~~~~~~~~v~~~-~~~~g~~~~~~~~svPv~lg~~Gv~~~~~~~~-L~~~E~~~L~~~~~~i  319 (369)
                      ++++|+|+++++++++|++|.+.   ++++ ++++|++.+++|||+||++|++|++.+ .+.+ |+++|+++|++++..+
T Consensus       235 ss~~s~A~a~~~~~~ail~d~~~---v~~~s~~~~g~~~~~v~~s~P~~lg~~Gv~~~-~~~~ll~~~E~~~l~~Sa~~l  310 (343)
T 3fi9_A          235 SSFQSPSYVSIEMIRAAMGGEAF---RWPAGCYVNVPGFEHIMMAMETTITKDGVKHS-DINQLGNEAERAALKESYSHL  310 (343)
T ss_dssp             CCCHHHHHHHHHHHHHHTTSSCC---CSCEEEEEEETTEEEEEEEESEEEETTEEEEC-CGGGSSCHHHHHHHHHHHHHH
T ss_pred             CcHHhHHHHHHHHHHHHHhCCCc---eEEEEEEEeCCCcCceEEEeEEEEeCCceEEE-ecCCCCCHHHHHHHHHHHHHH
Confidence            55779999999999999998763   5655 588887778999999999999999876 4322 8999999999999877


Q ss_pred             HHHHHhhh
Q 017551          320 QDWLGESE  327 (369)
Q Consensus       320 ~~~l~~~~  327 (369)
                      ++.+++.+
T Consensus       311 ~~~~~~~~  318 (343)
T 3fi9_A          311 AKLRDEVI  318 (343)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            77776664

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=100.00  E-value=3.7e-60  Score=463.40  Aligned_cols=301  Identities=23%  Similarity=0.295  Sum_probs=243.8

Q ss_pred             cccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCCc-----EEEEEeCCC----chhHHHHhhcccCCCeEEEEeCCCChh
Q 017551           13 RAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDTGAVVRGFLGQPQLE   83 (369)
Q Consensus        13 ~~~~~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~-----el~L~D~~~----~~g~~~dL~~~~~~~~v~~~~~t~dl~   83 (369)
                      +.+...++.||+|+||+|+||++++++|++++++.     ||+|||+++    ++|+++||+|+.+......+. ++|.+
T Consensus        17 ~~~~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~-~~~~~   95 (345)
T 4h7p_A           17 QGPGSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVV-TADPR   95 (345)
T ss_dssp             -----CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEE-ESCHH
T ss_pred             cCCCCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEE-cCChH
Confidence            33346667899999999999999999999988765     999999986    478999999998655555544 45678


Q ss_pred             hhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcE
Q 017551           84 NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKL  162 (369)
Q Consensus        84 ~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kv  162 (369)
                      ++++|||+||++||.||||||+|+|++..|+++++++++.|.++| |+++++++|||+|++++++.   ++.++++++|+
T Consensus        96 ~a~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNPvd~~~~i~~---~~~~g~~~~r~  172 (345)
T 4h7p_A           96 VAFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNPANTNALILL---KSAQGKLNPRH  172 (345)
T ss_dssp             HHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHH---HHTTTCSCGGG
T ss_pred             HHhCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCCcchHHHHHH---HHccCCCCcce
Confidence            999999999999999999999999999999999999999999997 78999999999999998763   45667666555


Q ss_pred             EE-echhcHHHHHHHHHHHhCCCCCCCc-eeEEeecCCCccccccccCCCCCC-----CCHHHH-HHHHhhhccchhhhh
Q 017551          163 LG-VTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHAGVTILPLLSQVKPPCS-----FTQEET-EYLTNRIQNGGTEVV  234 (369)
Q Consensus       163 iG-~t~Ld~~R~~~~la~~lgv~~~~V~-~~viG~hg~~~~vp~~S~~~~~~~-----~~~~~~-~~l~~~v~~~~~ev~  234 (369)
                      || .|.||++|++++||+++|++|++|+ ++|||+||+ +++|+||++++.+.     ++++.+ +++.++++++|+||+
T Consensus       173 i~~~t~LDs~R~~~~la~~~~v~~~~V~~~~V~G~HG~-t~vp~~s~a~v~g~~~~~~~~~~~~~~~~~~~v~~~g~eIi  251 (345)
T 4h7p_A          173 VTAMTRLDHNRALSLLARKAGVPVSQVRNVIIWGNHSS-TQVPDTDSAVIGTTPAREAIKDDALDDDFVQVVRGRGAEII  251 (345)
T ss_dssp             EEECCHHHHHHHHHHHHHHHTSCGGGEECCEEEBCSST-TCEEECTTCEETTEEGGGGCCC------HHHHHHHHHHHHH
T ss_pred             eeeccchhHHHHHHHHHHHHCcChhheecceeecCCCC-eEEeeeccceECCccHHHhcchhhHHHHHHHHHHhhhhhhh
Confidence            54 5999999999999999999999997 568999999 99999999987531     233333 579999999999999


Q ss_pred             hhhccCCchhhHHHHHHHHHHHHHHhccCCCCceeEEEee-cCCC--CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHH
Q 017551          235 EAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFV-ASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYESGL  311 (369)
Q Consensus       235 ~~k~g~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~~~-~g~~--~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~  311 (369)
                      ++|  +++++||+|+|+++++++|+++.+....+..+.+. +|+|  ++++|||+||++| +|.+++++..+|+++|+++
T Consensus       252 ~~k--g~ss~~s~a~a~~~~~~~~l~~~~~~~~vs~~v~s~~g~YGi~~~v~~s~Pv~~~-~G~~~iv~~l~l~~~e~~~  328 (345)
T 4h7p_A          252 QLR--GLSSAMSAAKAAVDHVHDWIHGTPEGVYVSMGVYSDENPYGVPSGLIFSFPCTCH-AGEWTVVSGKLNGDLGKQR  328 (345)
T ss_dssp             HHH--SSCCCHHHHHHHHHHHHHHHHCCCTTCCEEEEEECTTCTTCCCSSCEEEEEEEEE-TTEEEECCSCC-----CGG
T ss_pred             hcC--CCcchhhHHHHHHHHHHHHhcCCCCceEEEEEEEeCCCCcCCCCCEEEEEEEEEe-CCEEEEeCCCCCCHHHHHH
Confidence            987  35789999999999999999998765433222344 5888  6899999999997 6888888756899999999


Q ss_pred             HHHHHHHHHH
Q 017551          312 FCLLHLCFQD  321 (369)
Q Consensus       312 L~~~~~~i~~  321 (369)
                      |++++..+++
T Consensus       329 l~~s~~~L~~  338 (345)
T 4h7p_A          329 LASTIAELQE  338 (345)
T ss_dssp             GHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999854443

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=100.00  E-value=3.7e-60  Score=461.46  Aligned_cols=293  Identities=22%  Similarity=0.352  Sum_probs=255.7

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhccc-CCCeEEEEeCCCChhhhcCCCcEEEE
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD-TGAVVRGFLGQPQLENALTGMDLVII   94 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~-~~~~v~~~~~t~dl~~al~~ADiVii   94 (369)
                      ++.+||+|||| |++|+++++.|+++++++||+|+|+++  +++.++||.|.. ....++...  ++ +++++|||+||+
T Consensus         7 ~~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~--~~-~~a~~~aDvVii   82 (326)
T 2zqz_A            7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS--AE-YSDAKDADLVVI   82 (326)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE--CC-GGGGGGCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE--CC-HHHhCCCCEEEE
Confidence            45589999999 999999999999999999999999987  678999999975 223444433  23 689999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHH
Q 017551           95 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA  173 (369)
Q Consensus        95 ~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~  173 (369)
                      ++|.|++|||+|++++.+|++++++++++|+++||++|++++|||+|++|++    +++.+++|++||||+ |+||+.|+
T Consensus        83 ~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~----~~k~s~~p~~rviG~gt~LD~~R~  158 (326)
T 2zqz_A           83 TAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVDILTYA----TWKLSGFPKNRVVGSGTSLDTARF  158 (326)
T ss_dssp             CCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSSSHHHHHHH----HHHHHCCCGGGEEECTTHHHHHHH
T ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHH----HHHHcCCCHHHEEEccccchHHHH
Confidence            9999999999999999999999999999999999999999999999999865    478889999999999 99999999


Q ss_pred             HHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCC-----------CCCHHHHHHHHhhhccchhhhhhhhccCCc
Q 017551          174 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-----------SFTQEETEYLTNRIQNGGTEVVEAKAGAGS  242 (369)
Q Consensus       174 ~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~-----------~~~~~~~~~l~~~v~~~~~ev~~~k~g~g~  242 (369)
                      ++++|+++|++|++|+++||||||+ +++|+||++++.+           .++++.++++.+++++++++|++.   +|+
T Consensus       159 ~~~la~~lgv~~~~v~~~v~G~HG~-t~~p~~s~~~v~g~~~~e~~~~~~~~~~~~~~~i~~~v~~~g~eii~~---kG~  234 (326)
T 2zqz_A          159 RQSIAEMVNVDARSVHAYIMGEHGD-TEFPVWSHANIGGVTIAEWVKAHPEIKEDKLVKMFEDVRDAAYEIIKL---KGA  234 (326)
T ss_dssp             HHHHHHHHTCCGGGEECCEEBSSST-TCEECGGGCEETTEEHHHHHHHCTTSCHHHHHHHHHHHHTHHHHHHHH---HSC
T ss_pred             HHHHHHHhCCChhheEEEEecccCC-ceEeehhhceECCEEHHHhhcccccCCHHHHHHHHHHHHHhHHHHHHc---CCC
Confidence            9999999999999999999999998 9999999987642           145667889999999999999994   589


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHH
Q 017551          243 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQ  320 (369)
Q Consensus       243 ~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~  320 (369)
                      ++|++|.++++++++|++|.+   .+++++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++++..++
T Consensus       235 t~~~~a~aa~~~~~ai~~~~~---~~~~vsv~~~G~yg~~~~~~svP~~ig~~Gv~~i~~~-~L~~~e~~~l~~s~~~l~  310 (326)
T 2zqz_A          235 TFYGIATALARISKAILNDEN---AVLPLSVYMDGQYGLNDIYIGTPAVINRNGIQNILEI-PLTDHEEESMQKSASQLK  310 (326)
T ss_dssp             CCHHHHHHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHhCCC---cEEEEEEeccCccCCCceEEEEEEEEcCCeeEEEecC-CCCHHHHHHHHHHHHHHH
Confidence            999999999999999999865   367665 899998 34999999999999999999995 999999999999996666


Q ss_pred             HHHHhh
Q 017551          321 DWLGES  326 (369)
Q Consensus       321 ~~l~~~  326 (369)
                      +.+++.
T Consensus       311 ~~~~~~  316 (326)
T 2zqz_A          311 KVLTDA  316 (326)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            665554

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=100.00  E-value=2.6e-60  Score=461.13  Aligned_cols=293  Identities=22%  Similarity=0.340  Sum_probs=250.8

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhccc-CCCeEEEEeCCCChhhhcCCCcEEEE
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD-TGAVVRGFLGQPQLENALTGMDLVII   94 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~-~~~~v~~~~~t~dl~~al~~ADiVii   94 (369)
                      ++.+||+|||| |++|+++++.|+++++++||+|+|+++  +++.++||.|.. ....++...  ++ +++++|||+||+
T Consensus         3 ~~~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~--~~-~~a~~~aDvVii   78 (318)
T 1ez4_A            3 PNHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS--GE-YSDCKDADLVVI   78 (318)
T ss_dssp             TTBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE--CC-GGGGTTCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE--CC-HHHhCCCCEEEE
Confidence            44589999999 999999999999999999999999987  678999999975 223444433  23 589999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHH
Q 017551           95 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA  173 (369)
Q Consensus        95 ~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~  173 (369)
                      ++|.|++|||+|+|++.+|++++++++++|+++||++|++++|||+|++|++    +++.+++|++||||+ |+||+.|+
T Consensus        79 ~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~----~~k~s~~p~~rviG~gt~LD~~R~  154 (318)
T 1ez4_A           79 TAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPVDILTYA----TWKFSGFPKERVIGSGTSLDSSRL  154 (318)
T ss_dssp             CCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHH----HHHHHCCCGGGEEECTTHHHHHHH
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHH----HHHHcCCCHHHEEeccccchHHHH
Confidence            9999999999999999999999999999999999999999999999999865    478889999999999 99999999


Q ss_pred             HHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCC----------CCCHHHHHHHHhhhccchhhhhhhhccCCch
Q 017551          174 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEAKAGAGSA  243 (369)
Q Consensus       174 ~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~----------~~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~  243 (369)
                      ++++|+++|++|++|+++||||||+ +++|+||++++.+          .++++.++++.+++++++++|++.   +|++
T Consensus       155 ~~~la~~lgv~~~~v~~~v~G~HG~-t~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~---kg~t  230 (318)
T 1ez4_A          155 RVALGKQFNVDPRSVDAYIMGEHGD-SEFAAYSTATIGTRPVRDVAKEQGVSDDDLAKLEDGVRNKAYDIINL---KGAT  230 (318)
T ss_dssp             HHHHHHHHTCCGGGEECCEESSSSS-SCEECGGGCEETTEEHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHH---HSCC
T ss_pred             HHHHHHHhCcChhHEEEEEecccCC-ceEEEehhhcCCCeeHHHHhhccCCCHHHHHHHHHHHHHhhhhheeC---CCcc
Confidence            9999999999999999999999998 9999999988642          256677899999999999999994   5899


Q ss_pred             hhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHH
Q 017551          244 TLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQD  321 (369)
Q Consensus       244 ~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~  321 (369)
                      +|++|.++++++++|++|.+   .+++++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++++..++.
T Consensus       231 ~~~~a~a~~~~~~ai~~~~~---~~~~vs~~~~G~yg~~~~~~~vP~~ig~~Gv~~i~~~-~L~~~e~~~l~~s~~~l~~  306 (318)
T 1ez4_A          231 FYGIGTALMRISKAILRDEN---AVLPVGAYMDGQYGLNDIYIGTPAIIGGTGLKQIIES-PLSADELKKMQDSAATLKK  306 (318)
T ss_dssp             CHHHHHHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHhCCC---cEEEEEEeecCccCCCceEEEEEEEEeCCeeEEEcCC-CCCHHHHHHHHHHHHHHHH
Confidence            99999999999999999865   367665 889998 34999999999999999999995 9999999999999966665


Q ss_pred             HHHhh
Q 017551          322 WLGES  326 (369)
Q Consensus       322 ~l~~~  326 (369)
                      .+++.
T Consensus       307 ~~~~~  311 (318)
T 1ez4_A          307 VLNDG  311 (318)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            55544

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=100.00  E-value=8.3e-60  Score=456.11  Aligned_cols=288  Identities=21%  Similarity=0.307  Sum_probs=257.0

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC-CCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~-~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      |||+|||| |++|+++++.|+++++++||+|+|+++  +++.++||.|... ...++...  ++ +++++|||+||+++|
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~--~~-~~a~~~aD~Vii~ag   76 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA--GS-YGDLEGARAVVLAAG   76 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE--CC-GGGGTTEEEEEECCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE--CC-HHHhCCCCEEEECCC
Confidence            69999999 999999999999999999999999997  6788999999752 23444433  34 588999999999999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHHHHH
Q 017551           98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTF  176 (369)
Q Consensus        98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~~~~  176 (369)
                      .|++|||+|+|++.+|++++++++++|+++||++|++++|||+|++|+++    ++.+++|++||||+ |+||+.|++++
T Consensus        77 ~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~----~k~s~~p~~rviG~gt~LD~~R~~~~  152 (310)
T 2xxj_A           77 VAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPVDVMTQVA----YALSGLPPGRVVGSGTILDTARFRAL  152 (310)
T ss_dssp             CCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHH----HHHHTCCGGGEEECTTHHHHHHHHHH
T ss_pred             CCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecCchHHHHHHH----HHHcCCCHHHEEecCcchhHHHHHHH
Confidence            99999999999999999999999999999999999999999999998654    77889999999999 99999999999


Q ss_pred             HHHHhCCCCCCCceeEEeecCCCccccccccCCCCCC------------CCHHHHHHHHhhhccchhhhhhhhccCCchh
Q 017551          177 VAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCS------------FTQEETEYLTNRIQNGGTEVVEAKAGAGSAT  244 (369)
Q Consensus       177 la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~~------------~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~  244 (369)
                      +|+++|++|++|+++||||||+ +++|+||++++.+.            ++++.++++.+++++++++|++.   +|+++
T Consensus       153 la~~lgv~~~~v~~~v~G~HG~-t~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~---kg~t~  228 (310)
T 2xxj_A          153 LAEYLRVAPQSVHAYVLGEHGD-SEVLVWSSAQVGGVPLLEFAEARGRALSPEDRARIDEGVRRAAYRIIEG---KGATY  228 (310)
T ss_dssp             HHHHHTSCGGGEEEEEEBCSST-TCEEEEEEEEETTEEHHHHHHHTTCCCCHHHHHHHHHHHHTHHHHHHHH---HSCCC
T ss_pred             HHHHhCcCHHHeEEEEecccCC-ccccchhhccCCCEEHHHHhhhcccCCCHHHHHHHHHHHHHhhHHHHhc---cCCcH
Confidence            9999999999999999999998 99999999876321            46777899999999999999994   48999


Q ss_pred             hHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 017551          245 LSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDW  322 (369)
Q Consensus       245 ~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~  322 (369)
                      |++|.++++++++|++|.+   .+++++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++++..+++.
T Consensus       229 ~~~a~a~~~~~~ai~~~~~---~~~~vs~~~~G~yg~~~~~~~vP~~ig~~Gv~~i~~~-~L~~~e~~~l~~s~~~l~~~  304 (310)
T 2xxj_A          229 YGIGAGLARLVRAILTDEK---GVYTVSAFTPEVAGVLEVSLSLPRILGAGGVAGTVYP-SLSPEERAALRRSAEILKEA  304 (310)
T ss_dssp             HHHHHHHHHHHHHHHTTCC---EEEEEEEEEEEETTEEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCC---CEEEEEEEEcCccCCccEEEEEEEEEeCCeeEEEcCC-CCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999855   367675 889988 47899999999999999999995 99999999999999555544


Q ss_pred             HH
Q 017551          323 LG  324 (369)
Q Consensus       323 l~  324 (369)
                      ++
T Consensus       305 ~~  306 (310)
T 2xxj_A          305 AF  306 (310)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=100.00  E-value=1.9e-61  Score=469.38  Aligned_cols=281  Identities=20%  Similarity=0.254  Sum_probs=251.6

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC---CCeEEEEeCCCChhhhcCCCcEEE
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT---GAVVRGFLGQPQLENALTGMDLVI   93 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~---~~~v~~~~~t~dl~~al~~ADiVi   93 (369)
                      +.+||+|||| |.||+++++.+++++++++|+|+|+++  ++|.++||+|...   ..++..   ++|+ ++++|||+||
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~---t~d~-~~~~daDiVI   94 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVS---GKDY-SVSAGSKLVV   94 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEE---ESSS-CSCSSCSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEE---cCCH-HHhCCCCEEE
Confidence            5589999999 999999999999999999999999988  6899999999742   233332   4576 4699999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHH
Q 017551           94 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVR  172 (369)
Q Consensus        94 i~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R  172 (369)
                      +++|.||+|||+|+|++.+|+++++++++++.++||++|++++|||+|++|+++    ++.++||++||||+ |.||+.|
T Consensus        95 itaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNPvdi~t~~~----~k~sg~p~~rViG~gt~LDs~R  170 (330)
T 3ldh_A           95 ITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPELGTDKNKQD----WKLSGLPMHRIIGSGCNLDSAR  170 (330)
T ss_dssp             ECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHH----HHHHCCCGGGEECCTTHHHHHH
T ss_pred             EeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCccHHHHHHH----HHHhCCCHHHeecccCchhHHH
Confidence            999999999999999999999999999999999999999999999999998765    67789999999999 7899999


Q ss_pred             HHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCCCCCHHHH-HHHHhhhccchhhhhhhhccCCchhhHHHH--
Q 017551          173 ANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEET-EYLTNRIQNGGTEVVEAKAGAGSATLSMAY--  249 (369)
Q Consensus       173 ~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~~~~~~~~-~~l~~~v~~~~~ev~~~k~g~g~~~~s~A~--  249 (369)
                      +++++|+++|++|++|+++||||||+ +++|+||+          +| +++.++++++|+||+++   ||+++|++|+  
T Consensus       171 ~~~~lA~~lgv~~~~V~~~V~G~Hg~-t~vp~~S~----------~~~~~~~~~v~~~g~eii~~---kg~t~~a~a~~~  236 (330)
T 3ldh_A          171 FRYLMGERLGVHSCLVIGWVIGQHGD-SVPSVWSG----------MWDAKLHKDVVDSAYEVIKL---KGYTSWAIGLVV  236 (330)
T ss_dssp             HHHHHHHHHTSCTTTCCEEECSSSST-TCCEEEEE----------EEETTEEHHHHHCCCTTSTT---CHHHHHHHHHTT
T ss_pred             HHHHHHHHhCCCHHHeEEEEEcCCCC-ceeeechh----------hHHHHHHHHHHHHHHHHHHc---cCCcceeeeeec
Confidence            99999999999999999999999998 99999998          23 57888999999999995   4899999999  


Q ss_pred             ---------------HHHHHHHHHHhccCCCCceeEEE-eecCCC--CCccEEEEEEEEcCCCeEE--EccCCCCCHHHH
Q 017551          250 ---------------AAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEE--IFQLGPLNEYES  309 (369)
Q Consensus       250 ---------------a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~lg~~Gv~~--~~~~~~L~~~E~  309 (369)
                                     ++++++++|+++.+   .+++|+ +++|+|  ++++|||+||++| +|+++  ++++ +|+++|+
T Consensus       237 ~~~~~~~~~~~~~~~a~~~~~~ail~~~~---~v~~~s~~~~g~yg~~~~v~~s~P~~lg-~Gv~~~~iv~~-~L~~~E~  311 (330)
T 3ldh_A          237 SNPVDVLTYVAWKGCSVADLAQTIMKDLC---RVHPVSTMVKDFYGIKDNVFLSLPCVLN-NGISHCNIVKM-KLKPDEE  311 (330)
T ss_dssp             HHHHTTSSSCSCTHHHHHHHHHHHHHTCC---EEECCBCCCSSSSSCCSCCCCBCCEEEB-TTBCTTCCCCC-CCCHHHH
T ss_pred             cCccchhhhhhhHHHHHHHHHHHHHcCCC---ceEEEEeecCCccCCCCceEEEEEEEEC-CcEEEcceecC-CCCHHHH
Confidence                           99999999999754   588886 789999  4699999999999 99999  9995 9999999


Q ss_pred             HHHHHHHHHHHHHHHhhhhhcc
Q 017551          310 GLFCLLHLCFQDWLGESEERVS  331 (369)
Q Consensus       310 ~~L~~~~~~i~~~l~~~~~~~~  331 (369)
                      ++|++++    +.|+++++.++
T Consensus       312 ~~l~~s~----~~l~~~~~~~~  329 (330)
T 3ldh_A          312 QQLQKSA----TTLWDIQKDLK  329 (330)
T ss_dssp             HHHHHHH----HHHHHHHHTCC
T ss_pred             HHHHHHH----HHHHHHHHHcC
Confidence            9999999    55555544443

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=100.00  E-value=1.5e-59  Score=454.00  Aligned_cols=287  Identities=24%  Similarity=0.396  Sum_probs=257.6

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhccc----CCCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD----TGAVVRGFLGQPQLENALTGMDLVIIP   95 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~----~~~~v~~~~~t~dl~~al~~ADiVii~   95 (369)
                      ||+|||| |++|+++++.++++++ +||+|+|+++  +++.++||.|..    ...+++.   ++|+ ++++|||+||++
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l-~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~---t~d~-~a~~~aD~Vi~~   74 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGY-DDLLLIARTPGKPQGEALDLAHAAAELGVDIRISG---SNSY-EDMRGSDIVLVT   74 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTC-SCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEE---ESCG-GGGTTCSEEEEC
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCC-CEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEE---CCCH-HHhCCCCEEEEe
Confidence            7999999 9999999999998888 8999999998  688899999964    2334553   3566 799999999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHHH
Q 017551           96 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRAN  174 (369)
Q Consensus        96 ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~~  174 (369)
                      +|.|++|||+|+|++.+|++++++++++++++||++|++++|||+|++++++    ++.+++|++||||+ |+||+.|++
T Consensus        75 ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~----~k~~~~p~~rviG~gt~LD~~R~~  150 (308)
T 2d4a_B           75 AGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTNPVDAMTYVM----YKKTGFPRERVIGFSGILDSARMA  150 (308)
T ss_dssp             CSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHH----HHHHCCCGGGEEECCHHHHHHHHH
T ss_pred             CCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHH----HHhcCCChhhEEEecccchHHHHH
Confidence            9999999999999999999999999999999999999999999999998654    78889999999999 999999999


Q ss_pred             HHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCCC-----CCHHHHHHHHhhhccchhhhhhhhccCC-chhhHHH
Q 017551          175 TFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCS-----FTQEETEYLTNRIQNGGTEVVEAKAGAG-SATLSMA  248 (369)
Q Consensus       175 ~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~~-----~~~~~~~~l~~~v~~~~~ev~~~k~g~g-~~~~s~A  248 (369)
                      +++|+++|++|++|+++||||||+ +++|+||++++.+.     +++++++++.+++++++++|++.   +| +++|++|
T Consensus       151 ~~la~~lgv~~~~v~~~v~G~Hg~-t~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~v~~~g~eii~~---kg~s~~~~~a  226 (308)
T 2d4a_B          151 YYISQKLGVSFKSVNAIVLGMHGQ-KMFPVPRLSSVGGVPLEHLMSKEEIEEVVSETVNAGAKITEL---RGYSSNYGPA  226 (308)
T ss_dssp             HHHHHHHTSCGGGEECCEEBCSST-TCEECGGGCEETTEEHHHHSCHHHHHHHHHHHHTHHHHHHHH---HSSCCCHHHH
T ss_pred             HHHHHHhCcChhHeEEEEEeccCC-ceeeeehhccCCCEEHHHHcCHHHHHHHHHHHHHhhHhhhhC---CCCccHHHHH
Confidence            999999999999999999999998 99999999987431     46778999999999999999994   47 8999999


Q ss_pred             HHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHHHHhh
Q 017551          249 YAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWLGES  326 (369)
Q Consensus       249 ~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~l~~~  326 (369)
                      .++++++++|++|.+   .+++++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++++..++..+++.
T Consensus       227 ~a~~~~~~ai~~~~~---~v~~vs~~~~G~yg~~~~~~~vP~~ig~~Gv~~i~~~-~L~~~e~~~l~~s~~~l~~~~~~~  302 (308)
T 2d4a_B          227 AGLVLTVEAIKRDSK---RIYPYSLYLQGEYGYNDIVAEVPAVIGKSGIERIIEL-PLTEDEKRKFDEAVQAVKKLVETL  302 (308)
T ss_dssp             HHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHhCCC---cEEEEEEEEcCccCCCceEEEEEEEEcCCceEEecCC-CCCHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999865   477775 889998 57999999999999999999995 999999999999996555555443

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=100.00  E-value=6.1e-59  Score=457.82  Aligned_cols=297  Identities=21%  Similarity=0.200  Sum_probs=245.2

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcE---EEEEeCCC------chhHHHHhhcccCC--CeEEEEeCCCChhhh
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSV---LHLYDVVN------TPGVTADISHMDTG--AVVRGFLGQPQLENA   85 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~e---l~L~D~~~------~~g~~~dL~~~~~~--~~v~~~~~t~dl~~a   85 (369)
                      .++++||+||||+|+||+++++.|++++++++   |+|+|++.      ++|+++||+|+.+.  ..++..   ++.+++
T Consensus        29 ~~~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i~---~~~y~~  105 (375)
T 7mdh_A           29 WKKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIG---IDPYEV  105 (375)
T ss_dssp             CCCCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE---SCHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEEe---cCCHHH
Confidence            45678999999779999999999999998877   77766543      58999999998742  234442   344689


Q ss_pred             cCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEE
Q 017551           86 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  164 (369)
Q Consensus        86 l~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG  164 (369)
                      ++|||+||++||.||||||+|+|++.+|++++++++++|.++ +|+++++++|||+|++|+++    ++.++++|+|+||
T Consensus       106 ~~daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPvD~~t~ia----~k~sg~~~~rvig  181 (375)
T 7mdh_A          106 FEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPCNTNALIC----LKNAPDIPAKNFH  181 (375)
T ss_dssp             TTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHH----HHTCTTSCGGGEE
T ss_pred             hCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCchhHHHHHH----HHHcCCCCccEEE
Confidence            999999999999999999999999999999999999999998 79999999999999999876    6666666678888


Q ss_pred             e-chhcHHHHHHHHHHHhCCCCCCCce-eEEeecCCCccccccccCCCCC----C-CCHHHH--HHHHhhhccchhhhhh
Q 017551          165 V-TMLDVVRANTFVAEVLGLDPRDVDV-PVVGGHAGVTILPLLSQVKPPC----S-FTQEET--EYLTNRIQNGGTEVVE  235 (369)
Q Consensus       165 ~-t~Ld~~R~~~~la~~lgv~~~~V~~-~viG~hg~~~~vp~~S~~~~~~----~-~~~~~~--~~l~~~v~~~~~ev~~  235 (369)
                      . |.||++||+++||+++|++|++|+. +||||||+ +++|+||++++.+    + ..+++|  +++.++|+++|++|++
T Consensus       182 ~gT~LDsaR~r~~lA~~lgv~~~~V~~v~V~GeHgd-t~vp~~S~a~V~G~pl~~~~~~~~~~~~~i~~~v~~~g~eII~  260 (375)
T 7mdh_A          182 ALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHST-TQVPDFLNAKIDGRPVKEVIKRTKWLEEEFTITVQKRGGALIQ  260 (375)
T ss_dssp             ECCHHHHHHHHHHHHHHTTSCGGGEECCEEEBCSST-TCEEECSSCEETTEEGGGTCCCHHHHHHHHHHHHHTHHHHHHH
T ss_pred             eeehHHHHHHHHHHHHHhCcChhhcccceEEecCCC-ceeeeeecccCCCEEhhHhccchhhHHHHHHHHHHHHHHHHHH
Confidence            8 9999999999999999999999985 89999998 9999999998753    1 234444  6899999999999999


Q ss_pred             hhccCCchhhHHHHHHHHHHHHH---HhccCCCCceeEEE-eecC-CC--CCccEEEEEEEEcCCCeEEEccCCCCCHHH
Q 017551          236 AKAGAGSATLSMAYAAVKFADAC---LRGLRGDAGVVECA-FVAS-QV--TELPFFASKVRLGRQGAEEIFQLGPLNEYE  308 (369)
Q Consensus       236 ~k~g~g~~~~s~A~a~~~li~ai---~~~~~~~~~v~~~~-~~~g-~~--~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E  308 (369)
                      +|   |.+.+  |.++++++++|   ++|++ ++.+++|+ +++| +|  ++++|||+||++|++|++++++.++|+++|
T Consensus       261 ~k---G~ts~--a~aa~~i~~~i~~~l~g~d-~~~v~~vs~~~~G~~YGi~~dv~~s~P~vlg~~Gv~~iv~~l~L~~~E  334 (375)
T 7mdh_A          261 KW---GRSSA--ASTAVSIADAIKSLVTPTP-EGDWFSTGVYTTGNPYGIAEDIVFSMPCRSKGDGDYELATDVSNDDFL  334 (375)
T ss_dssp             HT---SSCCH--HHHHHHHHHHHHHHHSCCC-TTCCEEEEEECTTCSSCCCSSSEEEEEEECCSSSCCEECCCCCCCHHH
T ss_pred             hc---CCCch--HHHHHHHHHHHHHHhcCCC-CCeEEEEEEEeCCccCCCCCceEEEEEEEEcCCeeEEecCCCCCCHHH
Confidence            76   44544  34555555555   55433 33588886 7899 68  589999999999999999999524999999


Q ss_pred             HHHHHHHHHHHHHHHHhhhhhcc
Q 017551          309 SGLFCLLHLCFQDWLGESEERVS  331 (369)
Q Consensus       309 ~~~L~~~~~~i~~~l~~~~~~~~  331 (369)
                      +++|++++    +.|++..+.++
T Consensus       335 ~~~l~~Sa----~~L~~e~~~~~  353 (375)
T 7mdh_A          335 WERIKKSE----AELLAEKKCVA  353 (375)
T ss_dssp             HHHHHHHH----HHHHHHHHHTH
T ss_pred             HHHHHHHH----HHHHHHHHHHH
Confidence            99999999    45555544444

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=100.00  E-value=1.6e-58  Score=448.38  Aligned_cols=291  Identities=23%  Similarity=0.372  Sum_probs=257.4

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC--CCeEEEEeCCCChhhhcCCCcEEEE
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVII   94 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~--~~~v~~~~~t~dl~~al~~ADiVii   94 (369)
                      +++||+|||| |++|+++++.|+++++++||+|+|+++  +.+.++||.|...  ...++...  ++ +++++|||+||+
T Consensus         5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~--~~-~~a~~~aDvVvi   80 (317)
T 3d0o_A            5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA--GE-YSDCHDADLVVI   80 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE--CC-GGGGTTCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe--CC-HHHhCCCCEEEE
Confidence            4579999999 999999999999989889999999987  6788999998641  13444433  33 689999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHH
Q 017551           95 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA  173 (369)
Q Consensus        95 ~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~  173 (369)
                      ++|.|++||++|++++.+|++++++++++|.++||++|++++|||+|++|++    +++.+++|++||||+ |+||+.|+
T Consensus        81 ~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~----~~k~~~~p~~rviG~gt~lD~~r~  156 (317)
T 3d0o_A           81 CAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATNPVDILAYA----TWKFSGLPKERVIGSGTILDSARF  156 (317)
T ss_dssp             CCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHH----HHHHHCCCGGGEEECTTHHHHHHH
T ss_pred             CCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCcHHHHHHH----HHHHhCCCHHHEEecCccccHHHH
Confidence            9999999999999999999999999999999999999999999999999865    478889999999999 99999999


Q ss_pred             HHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCC----------CCCHHHHHHHHhhhccchhhhhhhhccCCch
Q 017551          174 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEAKAGAGSA  243 (369)
Q Consensus       174 ~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~----------~~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~  243 (369)
                      ++++|+++|++|++|+++||||||+ +++|+||++++.+          .++++.++++.+++++++++|++.   +|++
T Consensus       157 ~~~la~~l~v~~~~v~~~v~G~HG~-t~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~---kg~~  232 (317)
T 3d0o_A          157 RLLLSEAFDVAPRSVDAQIIGEHGD-TELPVWSHANIAGQPLKTLLEQRPEGKAQIEQIFVQTRDAAYDIIQA---KGAT  232 (317)
T ss_dssp             HHHHHHHHTSCGGGCBCCEEBCSST-TCEECTTTCEETTEEHHHHHHTSTTHHHHHHHHHHHHHTHHHHHHHH---HSCC
T ss_pred             HHHHHHHhCcChhhEEEEEEecCCC-CeeEeeeccccCCEEHHHHhhccCCCHHHHHHHHHHHHhhhhEEEeC---CCCc
Confidence            9999999999999999999999998 9999999988642          144566789999999999999994   5899


Q ss_pred             hhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHH
Q 017551          244 TLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQD  321 (369)
Q Consensus       244 ~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~  321 (369)
                      +|++|.|+++++++|++|.+   .+++++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++++..+++
T Consensus       233 ~~~~a~a~~~~~~ai~~~~~---~~~~~~~~~~g~~g~~~~~~~vP~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~  308 (317)
T 3d0o_A          233 YYGVAMGLARITEAIFRNED---AVLTVSALLEGEYEEEDVYIGVPAVINRNGIRNVVEI-PLNDEEQSKFAHSAKTLKD  308 (317)
T ss_dssp             CHHHHHHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHH
T ss_pred             hHhHHHHHHHHHHHHHcCCC---cEEEEEEeecCccCCCceEEEEEEEEeCCeeEEEecC-CCCHHHHHHHHHHHHHHHH
Confidence            99999999999999999855   367675 889998 34999999999999999999995 9999999999999965555


Q ss_pred             HHHh
Q 017551          322 WLGE  325 (369)
Q Consensus       322 ~l~~  325 (369)
                      .+++
T Consensus       309 ~~~~  312 (317)
T 3d0o_A          309 IMAE  312 (317)
T ss_dssp             HHHC
T ss_pred             HHHH
Confidence            5543

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=100.00  E-value=3.7e-58  Score=443.19  Aligned_cols=289  Identities=25%  Similarity=0.354  Sum_probs=257.6

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeC--CC--chhHHHHhhcccC-CCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV--VN--TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIP   95 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~--~~--~~g~~~dL~~~~~-~~~v~~~~~t~dl~~al~~ADiVii~   95 (369)
                      |||+||||+|++|++++..|+.+++..|++|+|+  ++  +.+.++||.|... ...++...  ++ +++++|||+||++
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~--~~-~~a~~~aDvVi~~   77 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ--GG-YEDTAGSDVVVIT   77 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE--CC-GGGGTTCSEEEEC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe--CC-HHHhCCCCEEEEc
Confidence            6999999779999999999999888889999999  76  5677899998742 23444433  24 5889999999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHHH
Q 017551           96 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRAN  174 (369)
Q Consensus        96 ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~~  174 (369)
                      +|.|+++|++|.+++.+|+++++++++++++++|++|++++|||+|++|++    +++.+++|++||||+ |+||+.|++
T Consensus        78 ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNPv~~~~~~----~~~~~~~p~~rviG~gt~Ld~~r~~  153 (303)
T 1o6z_A           78 AGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPVDLLNRH----LYEAGDRSREQVIGFGGRLDSARFR  153 (303)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSHHHHHHH----HHHHSSSCGGGEEECCHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCChHHHHHHH----HHHHcCCCHHHeeecccchhHHHHH
Confidence            999999999999999999999999999999999999999999999999865    488899999999999 999999999


Q ss_pred             HHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCC--CC-CHHHHHHHHhhhccchhhhhhhhccCCchhhHHHHHH
Q 017551          175 TFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC--SF-TQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAA  251 (369)
Q Consensus       175 ~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~--~~-~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~s~A~a~  251 (369)
                      +++|+++|++|++|+++||||||+ +++|+||++++.+  ++ ++++++++.+++++++++|++   ++|+++||+|.++
T Consensus       154 ~~la~~l~v~~~~v~~~v~G~HG~-~~~p~~s~~~v~g~p~~~~~~~~~~~~~~v~~~g~eii~---~kg~~~~~~a~a~  229 (303)
T 1o6z_A          154 YVLSEEFDAPVQNVEGTILGEHGD-AQVPVFSKVSVDGTDPEFSGDEKEQLLGDLQESAMDVIE---RKGATEWGPARGV  229 (303)
T ss_dssp             HHHHHHHTCCGGGEECCEEECSST-TEEECGGGCEETTBCCCCCHHHHHHHHHHHHHHHHHHHT---TTSSCCHHHHHHH
T ss_pred             HHHHHHhCcCHHHeEEEEEeCCCC-ccccCCcccccCCcCccCCHHHHHHHHHHHHHHhHHHHh---cCCChHHHHHHHH
Confidence            999999999999999999999998 9999999987521  45 788899999999999999998   5689999999999


Q ss_pred             HHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHHHH
Q 017551          252 VKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWLG  324 (369)
Q Consensus       252 ~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~l~  324 (369)
                      ++++++|++|.+   .+++++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++++..+++.++
T Consensus       230 ~~~~~ai~~~~~---~~~~~~~~~~g~~g~~~~~~~~P~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~  300 (303)
T 1o6z_A          230 AHMVEAILHDTG---EVLPASVKLEGEFGHEDTAFGVPVSLGSNGVEEIVEW-DLDDYEQDLMADAAEKLSDQYD  300 (303)
T ss_dssp             HHHHHHHHTTCC---CEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCC---CEEEEEEecCCccCCcceEEEEEEEEeCCeeEEecCC-CCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999875   367764 889998 57899999999999999999995 9999999999999965555544

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=100.00  E-value=6.9e-59  Score=453.35  Aligned_cols=294  Identities=22%  Similarity=0.306  Sum_probs=249.9

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcE-----EEEEeCCC----chhHHHHhhcccCCCeEEEEeCCCChhhhcCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSV-----LHLYDVVN----TPGVTADISHMDTGAVVRGFLGQPQLENALTGM   89 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~e-----l~L~D~~~----~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~A   89 (369)
                      +++||+|+||+|+||+++++.|+.++++++     |+|+|+++    ++|.++||+|+.+. .+..+..+++.+++++||
T Consensus         2 ~~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~-~~~~~~~~~~~~~~~~da   80 (333)
T 5mdh_A            2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALP-LLKDVIATDKEEIAFKDL   80 (333)
T ss_dssp             CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCT-TEEEEEEESCHHHHTTTC
T ss_pred             CCeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhc-ccCCEEEcCCcHHHhCCC
Confidence            578999999889999999999999998888     99999974    58999999997532 223222245667899999


Q ss_pred             cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCe-EEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-ch
Q 017551           90 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNA-TVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TM  167 (369)
Q Consensus        90 DiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a-~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~  167 (369)
                      |+||++||.||+|||+|+|++.+|+++++++++++.+++|++ |++++|||+|++|+++    ++.++++|+|+||. |.
T Consensus        81 DvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNPvd~~t~~~----~~~~~~~p~~~ig~~t~  156 (333)
T 5mdh_A           81 DVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPANTNCLTA----SKSAPSIPKENFSCLTR  156 (333)
T ss_dssp             SEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHH----HHTCTTSCGGGEEECCH
T ss_pred             CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCchHHHHHHH----HHHcCCCCcCEEEEEEh
Confidence            999999999999999999999999999999999999999998 7999999999999876    56665555555765 99


Q ss_pred             hcHHHHHHHHHHHhCCCCCCCcee-EEeecCCCccccccccCCC--CC-CC------CHHHH--HHHHhhhccchhhhhh
Q 017551          168 LDVVRANTFVAEVLGLDPRDVDVP-VVGGHAGVTILPLLSQVKP--PC-SF------TQEET--EYLTNRIQNGGTEVVE  235 (369)
Q Consensus       168 Ld~~R~~~~la~~lgv~~~~V~~~-viG~hg~~~~vp~~S~~~~--~~-~~------~~~~~--~~l~~~v~~~~~ev~~  235 (369)
                      ||++|++++||+++|++|++|+++ ||||||+ +++|+||++++  .+ ++      .++.|  +++.++++++|+||++
T Consensus       157 LDs~R~~~~la~~l~v~~~~v~~~vV~GeHgd-s~vp~~S~a~v~i~g~~~~~~~~~~~~~~~~~~~~~~v~~~g~eIi~  235 (333)
T 5mdh_A          157 LDHNRAKAQIALKLGVTSDDVKNVIIWGNHSS-TQYPDVNHAKVKLQAKEVGVYEAVKDDSWLKGEFITTVQQRGAAVIK  235 (333)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGEECCEEEBCSST-TCEEECTTCEEECSSCEEEHHHHHCCHHHHHTHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCcCHHHeeecEEEEcCCC-CEEEeeeccEeccCCeeccHHHhhccccccHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999987 5999999 99999999975  22 12      22333  5899999999999999


Q ss_pred             hhccCCchhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecC-CC--CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHH
Q 017551          236 AKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVAS-QV--TELPFFASKVRLGRQGAEEIFQLGPLNEYESGL  311 (369)
Q Consensus       236 ~k~g~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g-~~--~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~  311 (369)
                      +|  ++++.|+.|.++++++++|++|.+. +.+++|+ +++| +|  ++++|||+||++ ++|++++++.++|+++|+++
T Consensus       236 ~k--~~ssa~~~a~~~~~~~~~il~~~~~-~~v~~~s~~~~G~~YGi~~~v~~s~P~~~-~~Gv~~iv~~l~L~~~E~~~  311 (333)
T 5mdh_A          236 AR--KLSSAMSAAKAICDHVRDIWFGTPE-GEFVSMGIISDGNSYGVPDDLLYSFPVTI-KDKTWKIVEGLPINDFSREK  311 (333)
T ss_dssp             HH--SSCCCHHHHHHHHHHHHHHHHCCCT-TCCEEEEEECTTCSSSCCSSCEEEEEEEE-ETTEEEECCCCCCCHHHHHH
T ss_pred             cc--CchHHHHHHHHHHHHHHHHhcCCCC-CeEEEEEEecCCcccCCCCCeEEEEEEEE-cCCeEEEcCCCCCCHHHHHH
Confidence            75  3568899999999999999998753 2488886 6799 88  479999999999 99999998723999999999


Q ss_pred             HHHHHHHHHHH
Q 017551          312 FCLLHLCFQDW  322 (369)
Q Consensus       312 L~~~~~~i~~~  322 (369)
                      |++++..+++.
T Consensus       312 l~~sa~~L~~~  322 (333)
T 5mdh_A          312 MDLTAKELAEE  322 (333)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999544333

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=100.00  E-value=1.3e-58  Score=449.25  Aligned_cols=292  Identities=24%  Similarity=0.353  Sum_probs=248.3

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC-CCeEEEEeCCCChhhhcCCCcEEEE
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVII   94 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~-~~~v~~~~~t~dl~~al~~ADiVii   94 (369)
                      ++++||+|||| |++|+++++.|+++++++||+|+|+++  +.+.++||.|... ...++...  ++ +++++|||+||+
T Consensus         5 ~~~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~--~~-~~a~~~aDvVii   80 (318)
T 1y6j_A            5 KSRSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA--GD-YSDVKDCDVIVV   80 (318)
T ss_dssp             --CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC----C-GGGGTTCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEE--CC-HHHhCCCCEEEE
Confidence            34689999999 999999999999999999999999998  6789999999752 23555432  35 578999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHH
Q 017551           95 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA  173 (369)
Q Consensus        95 ~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~  173 (369)
                      ++|.|++||++|+|++.+|++++++++++|.++||++|++++|||+|++|+++    ++.+++|++||||+ |+||+.|+
T Consensus        81 ~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~----~k~s~~p~~rviG~gt~Ld~~r~  156 (318)
T 1y6j_A           81 TAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPVDIITYMI----QKWSGLPVGKVIGSGTVLDSIRF  156 (318)
T ss_dssp             CCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSHHHHHHHH----HHHHTCCTTTEEECTTHHHHHHH
T ss_pred             cCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecCcHHHHHHHH----HHHcCCCHHHEeccCCchHHHHH
Confidence            99999999999999999999999999999999999999999999999998654    77889999999999 99999999


Q ss_pred             HHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCC----C--------CCHHHHHHHHhhhccchhhhhhhhccCC
Q 017551          174 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----S--------FTQEETEYLTNRIQNGGTEVVEAKAGAG  241 (369)
Q Consensus       174 ~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~----~--------~~~~~~~~l~~~v~~~~~ev~~~k~g~g  241 (369)
                      ++++|+++|++|++|+++||||||+ +++|+||++++.+    +        ++++.++++.+++++++++|++   ++|
T Consensus       157 ~~~la~~lgv~~~~v~~~v~G~HG~-t~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~---~kg  232 (318)
T 1y6j_A          157 RYLLSEKLGVDVKNVHGYIIGEHGD-SQLPLWSCTHIAGKNINEYIDDPKCNFTEEDKKKIAEDVKTAGATIIK---NKG  232 (318)
T ss_dssp             HHHHHTTTTCCTTTEECCEEBCSSS-SCEECCTTCEETTBCSCCC-----------CCHHHHHHHHHHHHHHHH---HTS
T ss_pred             HHHHHHHhCCCHHHeEEEEecccCC-cEeeeehhceECCEEHHHHhhhhcccCCHHHHHHHHHHHHHhhHhHhh---CCC
Confidence            9999999999999999999999998 9999999987632    1        2344568999999999999999   458


Q ss_pred             chhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHH
Q 017551          242 SATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCF  319 (369)
Q Consensus       242 ~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i  319 (369)
                      +++|++|.++++++++|++|.+.   +++++ +++|+| .+++|||+||++|++|+++++.+ +|+++|+++|++++..+
T Consensus       233 ~t~~~~a~a~~~~~~ai~~~~~~---~~~~~~~~~G~yg~~~~~~~vP~~ig~~Gv~~i~~~-~L~~~e~~~l~~s~~~l  308 (318)
T 1y6j_A          233 ATYYGIAVSINTIVETLLKNQNT---IRTVGTVINGMYGIEDVAISLPSIVNSEGVQEVLQF-NLTPEEEEALRFSAEQV  308 (318)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTCCC---EECCEEEECSBTTBCSEEEECCEEEETTEEEECCCC-CCCHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHcCCCc---EEEEEEeecCccCCcceEEEEEEEEcCCeeEEEecC-CCCHHHHHHHHHHHHHH
Confidence            99999999999999999998653   66665 889998 57999999999999999999995 99999999999999655


Q ss_pred             HHHHHh
Q 017551          320 QDWLGE  325 (369)
Q Consensus       320 ~~~l~~  325 (369)
                      ++.+++
T Consensus       309 ~~~~~~  314 (318)
T 1y6j_A          309 KKVLNE  314 (318)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            555443

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=100.00  E-value=6.6e-58  Score=442.61  Aligned_cols=290  Identities=28%  Similarity=0.464  Sum_probs=251.1

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhccc----CCCeEEEEeCCCChhhhcCCCcEEEE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD----TGAVVRGFLGQPQLENALTGMDLVII   94 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~----~~~~v~~~~~t~dl~~al~~ADiVii   94 (369)
                      +||+|||| |++|+++++.+++.++++ |+|+|+++  +.+.++||.|..    ...+++.   ++|+ ++++|||+||+
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~-v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~---t~d~-~a~~~aD~Vi~   76 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGD-IVLLDIVEGVPQGKALDLYEASPIEGFDVRVTG---TNNY-ADTANSDVIVV   76 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSE-EEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE---ESCG-GGGTTCSEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCe-EEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEE---CCCH-HHHCCCCEEEE
Confidence            69999999 999999999999998764 99999988  678889999863    2334553   3576 89999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHH
Q 017551           95 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA  173 (369)
Q Consensus        95 ~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~  173 (369)
                      ++|.|++||++|.|++.+|++++++++++++++||++|++++|||+|++++++    ++.+++|++||||+ |+||+.|+
T Consensus        77 a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNPv~~~t~~~----~~~~~~~~~rviG~gt~LD~~r~  152 (309)
T 1ur5_A           77 TSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPLDAMTYLA----AEVSGFPKERVIGQAGVLDAARY  152 (309)
T ss_dssp             CCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCSSHHHHHHHH----HHHHCCCGGGEEECCHHHHHHHH
T ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCCchHHHHHHH----HHHcCCCHHHEEECCcchHHHHH
Confidence            99999999999999999999999999999999999999999999999998654    77889999999999 99999999


Q ss_pred             HHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCC----C-CCHHHHHHHHhhhccchhhhhhhhccCCchhhHHH
Q 017551          174 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----S-FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMA  248 (369)
Q Consensus       174 ~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~----~-~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~s~A  248 (369)
                      ++++|+++|++|++|+++||||||+ +++|+||++++.+    + +++++++++.+++++++++|++. .++|+++|++|
T Consensus       153 ~~~la~~lgv~~~~v~~~v~G~Hg~-t~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~v~~~g~eii~~-~~kgs~~~~~a  230 (309)
T 1ur5_A          153 RTFIAMEAGVSVEDVQAMLMGGHGD-EMVPLPRFSCISGIPVSEFIAPDRLAQIVERTRKGGGEIVNL-LKTGSAYYAPA  230 (309)
T ss_dssp             HHHHHHHHTCCGGGEEECCEECSGG-GEECCGGGEEETTEEGGGTSCHHHHHHHHHHHHTHHHHHHHH-HSSCCCCHHHH
T ss_pred             HHHHHHHhCCChhheeEEEecCcCC-ceeeeeecceeCCEeHHHHcCHhHHHHHHHHHHhhhHHhhhh-ccCCCcHHHHH
Confidence            9999999999999999999999998 9999999988643    1 47888999999999999999996 36789999999


Q ss_pred             HHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHHHHhh
Q 017551          249 YAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWLGES  326 (369)
Q Consensus       249 ~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~l~~~  326 (369)
                      .++++++++|++|.+   .+++++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++++..+++.+++.
T Consensus       231 ~a~~~~~~ai~~~~~---~~~~~~~~~~g~~g~~~~~~~vP~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~~~  306 (309)
T 1ur5_A          231 AATAQMVEAVLKDKK---RVMPVAAYLTGQYGLNDIYFGVPVILGAGGVEKILEL-PLNEEEMALLNASAKAVRATLDTL  306 (309)
T ss_dssp             HHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCC---cEEEEEEEecCccCCcceEEEEEEEEeCCceEEecCC-CCCHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999865   477775 889998 57999999999999999999995 999999999999996665555443

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A

Probab=100.00  E-value=1.1e-57  Score=439.63  Aligned_cols=284  Identities=16%  Similarity=0.229  Sum_probs=242.8

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      ++.+||+|||| |.+|+++++.++.++++++|+|+|+++ +.+.++|+.|... ++++.   ++|+ ++++|||+||+++
T Consensus        12 ~~~~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~-~~i~~---t~d~-~~l~~aD~Vi~aa   85 (303)
T 2i6t_A           12 KTVNKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNL-PNVEI---SKDL-SASAHSKVVIFTV   85 (303)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTC-TTEEE---ESCG-GGGTTCSEEEECC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcC-CCeEE---eCCH-HHHCCCCEEEEcC
Confidence            33579999999 999999999999999999999999997 7788999998653 46665   3577 8899999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHHHH
Q 017551           97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANT  175 (369)
Q Consensus        97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~~~  175 (369)
                      |.| +|||+|+|++.+|++++++++++++++||++|++++|||+|++|++    +++.++||++||||+ |+||+.|+++
T Consensus        86 g~~-~pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sNP~~~~t~~----~~~~~~~p~~rviG~gt~Ld~~R~~~  160 (303)
T 2i6t_A           86 NSL-GSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVEIMTYV----TWKLSTFPANRVIGIGCNLDSQRLQY  160 (303)
T ss_dssp             CC-----CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSSSHHHHHHH----HHHHHCCCGGGEEECTTHHHHHHHHH
T ss_pred             CCC-CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCChHHHHHHH----HHHhcCCCHHHeeCCCCCchHHHHHH
Confidence            996 8999999999999999999999999999999999999999988754    478899999999999 9999999999


Q ss_pred             HHHHHhCCCCCCCceeEEeecCCCccccccccCCCCCCCCHHHHHHHHhhhccchhhhhhhhccCCchhhHHHHHHHHHH
Q 017551          176 FVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFA  255 (369)
Q Consensus       176 ~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~s~A~a~~~li  255 (369)
                      ++|+++|++|++|+++|||+||+ +++|+||+...  .+.    +++.++++++++||++   ++|+++||+|+++++++
T Consensus       161 ~la~~lgv~~~~v~~~v~G~Hg~-s~~p~~s~~~~--~~~----~~~~~~~~~~g~eii~---~kGst~~~~a~a~~~i~  230 (303)
T 2i6t_A          161 IITNVLKAQTSGKEVWVIGEQGE-DKVLTWSGQEE--VVS----HTSQVQLSNRAMELLR---VKGQRSWSVGLSVADMV  230 (303)
T ss_dssp             HHHHTSCCTTGGGGEEEEBSCSS-SCEEEEBCSSC--CCC----HHHHHHHHHHHHTTSS---SCCCCHHHHHHHHHHHH
T ss_pred             HHHHHcCCChHHeEEEEecCCCC-Ccccccccccc--ccH----HHHHHHHHHHHHHHHH---ccCchHHhHHHHHHHHH
Confidence            99999999999999999999998 89999999632  122    3566778889999988   56899999999999999


Q ss_pred             HHHHhccCCCCceeEEE-eecCCC--CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHHHHh
Q 017551          256 DACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWLGE  325 (369)
Q Consensus       256 ~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~l~~  325 (369)
                      ++|++|.+   .+++++ +++|+|  ++++|||+||++|++|+++++++++|+++|+++|++++..+++.+++
T Consensus       231 ~ai~~~~~---~~~~vs~~~~g~yg~~~~~~~~vP~~ig~~Gv~~i~~~~~l~~~e~~~l~~s~~~l~~~~~~  300 (303)
T 2i6t_A          231 DSIVNNKK---KVHSVSALAKGYYDINSEVFLSLPCILGTNGVSEVIKTTLKEDTVTEKLQSSASSIHSLQQQ  300 (303)
T ss_dssp             HHHHTTCC---EEEEEEEECTTSTTCCSCCEEEEEEEEETTEEEEECCBCC-CCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHcCCC---cEEEEEEEeCCccCCCCCeEEEEEEEEECCccEEecCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999876   366665 889998  57999999999999999999886689999999999999666555543

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=100.00  E-value=2.7e-57  Score=439.57  Aligned_cols=291  Identities=22%  Similarity=0.335  Sum_probs=256.8

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC--CCeEEEEeCCCChhhhcCCCcEEE
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVI   93 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~--~~~v~~~~~t~dl~~al~~ADiVi   93 (369)
                      ++.+||+|||| |.+|+++++.++.+++.++|+|+|+++  +++.++||.|...  ...++...  ++ +++++|||+||
T Consensus         4 ~~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~--~~-~~al~~aDvVi   79 (316)
T 1ldn_A            4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH--GD-YDDCRDADLVV   79 (316)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE--CC-GGGTTTCSEEE
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc--Cc-HHHhCCCCEEE
Confidence            34579999999 999999999999988889999999997  6778899998652  12455443  34 57899999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHH
Q 017551           94 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVR  172 (369)
Q Consensus        94 i~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R  172 (369)
                      +++|.|++||++|.+++.+|++++++++++++++||++|++++|||+|++|+++    ++.+++|++||||+ |+||+.|
T Consensus        80 ia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tNPv~~~~~~~----~~~s~~p~~rviG~gt~lD~~r  155 (316)
T 1ldn_A           80 ICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPVDILTYAT----WKFSGLPHERVIGSGTILDTAR  155 (316)
T ss_dssp             ECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSSSHHHHHHHH----HHHHTCCGGGEEECTTHHHHHH
T ss_pred             EcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCCchHHHHHHH----HHHhCCCHHHEEecccchHHHH
Confidence            999999999999999999999999999999999999999999999999998654    77889999999999 9999999


Q ss_pred             HHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCC----C-------CCHHHHHHHHhhhccchhhhhhhhccCC
Q 017551          173 ANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----S-------FTQEETEYLTNRIQNGGTEVVEAKAGAG  241 (369)
Q Consensus       173 ~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~----~-------~~~~~~~~l~~~v~~~~~ev~~~k~g~g  241 (369)
                      +++++|+++|++|++|+++||||||+ +++|+||++++.+    +       +++++++++.+++++++++|++.   +|
T Consensus       156 ~~~~la~~l~v~~~~v~~~v~G~HG~-~~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~---kg  231 (316)
T 1ldn_A          156 FRFLLGEYFSVAPQNVHAYIIGEHGD-TELPVWSQAYIGVMPIRKLVESKGEEAQKDLERIFVNVRDAAYQIIEK---KG  231 (316)
T ss_dssp             HHHHHHHHHTSCGGGEEEEEEBCSST-TCEEEEEEEEETTEESTTTSGGGTTTHHHHHHHHHHHHHHHHHHHHHH---HS
T ss_pred             HHHHHHHHhCCCHHHeEEEEecccCC-ceeeeehhccCCCEEHHHHhhccccCCHHHHHHHHHHHHHhHHHHHhc---cC
Confidence            99999999999999999999999998 9999999987632    1       34566789999999999999994   48


Q ss_pred             chhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHH
Q 017551          242 SATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCF  319 (369)
Q Consensus       242 ~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i  319 (369)
                      +++|++|.++++++++|++|.+   .+++++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++++..+
T Consensus       232 ~~~~~~a~a~~~~~~ai~~~~~---~~~~~~~~~~g~yg~~~~~~~vP~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~l  307 (316)
T 1ldn_A          232 ATYYGIAMGLARVTRAILHNEN---AILTVSAYLDGLYGERDVYIGVPAVINRNGIREVIEI-ELNDDEKNRFHHSAATL  307 (316)
T ss_dssp             CCCHHHHHHHHHHHHHHHTTCC---EEEEEEEEEESTTSCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHhCCC---cEEEEEEEecCccCCcceEEEEEEEEeCCeeEEEccC-CCCHHHHHHHHHHHHHH
Confidence            9999999999999999999855   367665 889998 57999999999999999999995 99999999999999655


Q ss_pred             HHHHH
Q 017551          320 QDWLG  324 (369)
Q Consensus       320 ~~~l~  324 (369)
                      ++.++
T Consensus       308 ~~~~~  312 (316)
T 1ldn_A          308 KSVLA  312 (316)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            54443

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=100.00  E-value=2.2e-57  Score=439.69  Aligned_cols=293  Identities=24%  Similarity=0.400  Sum_probs=252.5

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeC--CC--chhHHHHhhcccC-C-CeEEEEeCCCChhhhcCCCcEEEE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV--VN--TPGVTADISHMDT-G-AVVRGFLGQPQLENALTGMDLVII   94 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~--~~--~~g~~~dL~~~~~-~-~~v~~~~~t~dl~~al~~ADiVii   94 (369)
                      |||+||||+|++|+++++.|+.+++..|++|+|+  ++  +.+.++||.|... . ..++...++++++++++|||+||+
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~l~~al~gaD~Vi~   80 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVVII   80 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEEEE
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCCcchHHHhCCCCEEEE
Confidence            6999999999999999999999988889999999  65  5788999998642 1 233433212236789999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHH
Q 017551           95 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA  173 (369)
Q Consensus        95 ~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~  173 (369)
                      +||.|+++|++|.+++.+|++++++++++++++| ++|++++|||+|++|+++    ++.+++|++|+||+ |+||+.|+
T Consensus        81 ~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNPv~~~t~~~----~k~~~~p~~rviG~gt~LD~~r~  155 (313)
T 1hye_A           81 TSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNPVDVMTYKA----LVDSKFERNQVFGLGTHLDSLRF  155 (313)
T ss_dssp             CCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSSHHHHHHHH----HHHHCCCTTSEEECTTHHHHHHH
T ss_pred             CCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCcHHHHHHHH----HHhhCcChhcEEEeCccHHHHHH
Confidence            9999999999999999999999999999999999 999999999999998655    77789999999999 99999999


Q ss_pred             HHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCC----C---CCHHHHHHHHhhhccchhhhhhhhccCCchhhH
Q 017551          174 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----S---FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLS  246 (369)
Q Consensus       174 ~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~----~---~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~s  246 (369)
                      ++++|+++|++|++|+++||||||+ +++|+||++++.+    +   ++++.++++.+++++++++|++   ++|+++||
T Consensus       156 ~~~la~~lgv~~~~v~~~v~G~Hg~-~~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~v~~~g~eii~---~kgs~~~~  231 (313)
T 1hye_A          156 KVAIAKFFGVHIDEVRTRIIGEHGD-SMVPLLSATSIGGIPIQKFERFKELPIDEIIEDVKTKGEQIIR---LKGGSEFG  231 (313)
T ss_dssp             HHHHHHHHTCCGGGEECCEEECSST-TEEECGGGCEETTEEGGGCGGGGGCCHHHHHHHHHHHTTSCCC---------CC
T ss_pred             HHHHHHHhCcCHHHeEEEEeeccCC-cccceeeccccCCEEHHHHhcCCHHHHHHHHHHHHhccceeec---CCCCcHHH
Confidence            9999999999999999999999998 9999999988743    2   2566789999999999999998   56899999


Q ss_pred             HHHHHHHHHHHHHhccCCCCceeEEE-eecCCC--CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 017551          247 MAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWL  323 (369)
Q Consensus       247 ~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~l  323 (369)
                      +|+++++++++|++|.+   .+++++ +++|+|  .+++|||+||++|++|+++++++ +|+++|+++|++++..++..+
T Consensus       232 ~a~a~~~~~~ai~~~~~---~~~~~~~~~~g~~~g~~~~~~~~P~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~  307 (313)
T 1hye_A          232 PAAAILNVVRCIVNNEK---RLLTLSAYVDGEFDGIRDVCIGVPVKIGRDGIEEVVSI-ELDKDEIIAFRKSAEIIKKYC  307 (313)
T ss_dssp             HHHHHHHHHHHHHTTCC---EEEEEEEEEESSSSSCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCC---eEEEEEEeecceecCccceEEEEEEEEeCCeeEEecCC-CCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999865   366665 889988  35999999999999999999995 999999999999996665555


Q ss_pred             Hhh
Q 017551          324 GES  326 (369)
Q Consensus       324 ~~~  326 (369)
                      ++.
T Consensus       308 ~~~  310 (313)
T 1hye_A          308 EEV  310 (313)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            443

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=100.00  E-value=1.3e-55  Score=428.90  Aligned_cols=287  Identities=29%  Similarity=0.462  Sum_probs=254.7

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhccc----CCCeEEEEeCCCChhhhcCCCcEE
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD----TGAVVRGFLGQPQLENALTGMDLV   92 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~----~~~~v~~~~~t~dl~~al~~ADiV   92 (369)
                      +.+||+|||| |++|++++..++..++++ |+|+|+++  +.+.++|+.|..    ...+++.   ++|+ ++++|||+|
T Consensus         3 ~~~kI~VIGa-G~vG~~ia~~la~~g~~~-v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~---t~d~-~al~~aD~V   76 (322)
T 1t2d_A            3 PKAKIVLVGS-GMIGGVMATLIVQKNLGD-VVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSG---SNTY-DDLAGADVV   76 (322)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCE-EEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEE---ECCG-GGGTTCSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCe-EEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEE---CCCH-HHhCCCCEE
Confidence            4579999999 999999999999999864 99999998  677888988863    2344553   4677 899999999


Q ss_pred             EEcCCCCCCCCCC-----HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-c
Q 017551           93 IIPAGVPRKPGMT-----RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-T  166 (369)
Q Consensus        93 ii~ag~p~k~g~~-----r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t  166 (369)
                      |+++|.|+++|++     |.|++.+|++++++++++|+++||++|++++|||++++++++    ++.++|||+||||+ |
T Consensus        77 i~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP~~~~t~~~----~~~~g~~~~rviG~gt  152 (322)
T 1t2d_A           77 IVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDVMVQLL----HQHSGVPKNKIIGLGG  152 (322)
T ss_dssp             EECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSSHHHHHHHH----HHHHCCCGGGEEECCH
T ss_pred             EEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCChHHHHHHH----HHhcCCChHHEEeccC
Confidence            9999999999999     999999999999999999999999999999999999998654    67788999999999 6


Q ss_pred             hhcHHHHHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCC----------CCCHHHHHHHHhhhccchhhhhhh
Q 017551          167 MLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEA  236 (369)
Q Consensus       167 ~Ld~~R~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~----------~~~~~~~~~l~~~v~~~~~ev~~~  236 (369)
                      .||++|++++||+++|++|++|+++||||||+ +++|+||++++.+          .+++++++++.+++++++++|++.
T Consensus       153 ~ld~~R~~~~la~~lgv~~~~v~~~v~G~HG~-~~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~  231 (322)
T 1t2d_A          153 VLDTSRLKYYISQKLNVCPRDVNAHIVGAHGN-KMVLLKRYITVGGIPLQEFINNKLISDAELEAIFDRTVNTALEIVNL  231 (322)
T ss_dssp             HHHHHHHHHHHHHHHTSCGGGEECCEEBCSST-TCEECGGGCEETTEEHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHHH
T ss_pred             cccHHHHHHHHHHHhCCCHHHeEEEEEcCCCC-cEEeeHHHceECcEeHHHhccccCCCHHHHHHHHHHHHHHHHHHHhc
Confidence            79999999999999999999999999999998 9999999987632          146777899999999999999995


Q ss_pred             hccCCchhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHH
Q 017551          237 KAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCL  314 (369)
Q Consensus       237 k~g~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~  314 (369)
                         +|+++||+|.++++++++|++|.+   .+++++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++
T Consensus       232 ---kgs~~~~~a~a~~~~~~ai~~~~~---~v~~~s~~~~g~~g~~~~~~~vP~~ig~~Gv~~i~~~-~l~~~e~~~l~~  304 (322)
T 1t2d_A          232 ---HASPYVAPAAAIIEMAESYLKDLK---KVLICSTLLEGQYGHSDIFGGTPVVLGANGVEQVIEL-QLNSEEKAKFDE  304 (322)
T ss_dssp             ---TSSCCHHHHHHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHH
T ss_pred             ---cCchHHHHHHHHHHHHHHHHhCCC---CEEEEEEEecCccCCCceEEEEEEEEeCCeeEEeCCC-CCCHHHHHHHHH
Confidence               479999999999999999999875   477775 889999 57999999999999999999995 999999999999


Q ss_pred             HHHHHHHHH
Q 017551          315 LHLCFQDWL  323 (369)
Q Consensus       315 ~~~~i~~~l  323 (369)
                      ++..+++.+
T Consensus       305 s~~~L~~~~  313 (322)
T 1t2d_A          305 AIAETKRMK  313 (322)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            985444444

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=100.00  E-value=2.5e-55  Score=428.37  Aligned_cols=296  Identities=30%  Similarity=0.470  Sum_probs=259.9

Q ss_pred             CCCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhccc----CCCeEEEEeCCCChhhhcCCC
Q 017551           16 GGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD----TGAVVRGFLGQPQLENALTGM   89 (369)
Q Consensus        16 ~~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~----~~~~v~~~~~t~dl~~al~~A   89 (369)
                      +.++++||+|||| |.+|++++..|+..+++ +|+|+|+++  +.+.++|+.|..    ...+++.   ++|++++++||
T Consensus         5 ~~~~~~kI~VIGa-G~vG~~lA~~la~~g~~-~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~---t~d~~ea~~~a   79 (331)
T 1pzg_A            5 LVQRRKKVAMIGS-GMIGGTMGYLCALRELA-DVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA---EYSYEAALTGA   79 (331)
T ss_dssp             CCSCCCEEEEECC-SHHHHHHHHHHHHHTCC-EEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE---ECSHHHHHTTC
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHHhCCCC-eEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE---eCCHHHHhCCC
Confidence            3556789999999 99999999999998875 499999998  566678887753    2334554   46887799999


Q ss_pred             cEEEEcCCCCCCCCC-----CHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEE
Q 017551           90 DLVIIPAGVPRKPGM-----TRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  164 (369)
Q Consensus        90 DiVii~ag~p~k~g~-----~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG  164 (369)
                      |+||+++|.|+++|+     +|.+++.+|++++++++++|+++||++|++++|||++++|+++    ++.++||++||||
T Consensus        80 DiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNP~~~~t~~~----~~~~~~~~~rviG  155 (331)
T 1pzg_A           80 DCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPLDCMVKVM----CEASGVPTNMICG  155 (331)
T ss_dssp             SEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHH----HHHHCCCGGGEEE
T ss_pred             CEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCchHHHHHHH----HHhcCCChhcEEe
Confidence            999999999999999     9999999999999999999999999999999999999998654    6778999999999


Q ss_pred             e-chhcHHHHHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCCC----------CCHHHHHHHHhhhccchhhh
Q 017551          165 V-TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCS----------FTQEETEYLTNRIQNGGTEV  233 (369)
Q Consensus       165 ~-t~Ld~~R~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~~----------~~~~~~~~l~~~v~~~~~ev  233 (369)
                      + |.||++|++++||+++|++|++|+++|||+||+ +++|+||++++.+.          +++++++++.++++.+|++|
T Consensus       156 ~gt~LD~~R~~~~la~~lgv~~~~v~~~v~G~Hg~-~~~p~~s~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ei  234 (331)
T 1pzg_A          156 MACMLDSGRFRRYVADALSVSPRDVQATVIGTHGD-CMVPLVRYITVNGYPIQKFIKDGVVTEKQLEEIAEHTKVSGGEI  234 (331)
T ss_dssp             CCHHHHHHHHHHHHHHHHTSCGGGEECCEEBCSST-TCEECGGGCEETTEEHHHHHHTTSSCHHHHHHHHHHHHHHHHHH
T ss_pred             ccchHHHHHHHHHHHHHhCCCHHHceEEEecCCCC-CEeeeeecceECCEEHHHHhhcccCCHHHHHHHHHHHHhccHHH
Confidence            9 689999999999999999999999999999998 99999999876431          46677888999999999999


Q ss_pred             hhhhccCCchhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHH
Q 017551          234 VEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGL  311 (369)
Q Consensus       234 ~~~k~g~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~  311 (369)
                      ++.. ++|+++||+|.++++++++|++|.+   .+++++ +++|+| .+++|||+||++|++|+++++.+ +|+++|+++
T Consensus       235 i~~~-~kgst~~~~a~a~~~ii~ai~~~~~---~~~~~~v~~~G~~g~~~~~~~vP~~vg~~Gv~~i~~~-~L~~~e~~~  309 (331)
T 1pzg_A          235 VRFL-GQGSAYYAPAASAVAMATSFLNDEK---RVIPCSVYCNGEYGLKDMFIGLPAVIGGAGIERVIEL-ELNEEEKKQ  309 (331)
T ss_dssp             HHHH-SSSCCCHHHHHHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHH
T ss_pred             HHhh-cCCCccchHHHHHHHHHHHHHhCCC---cEEEEEEEecCccCCCceEEEEEEEEeCCeeEEecCC-CCCHHHHHH
Confidence            9852 5689999999999999999999865   477775 889998 57999999999999999999985 999999999


Q ss_pred             HHHHHHHHHHHHHhh
Q 017551          312 FCLLHLCFQDWLGES  326 (369)
Q Consensus       312 L~~~~~~i~~~l~~~  326 (369)
                      |++++..+++.+++.
T Consensus       310 l~~s~~~l~~~~~~~  324 (331)
T 1pzg_A          310 FQKSVDDVMALNKAV  324 (331)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999996666665544

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=100.00  E-value=2.9e-55  Score=427.44  Aligned_cols=291  Identities=33%  Similarity=0.530  Sum_probs=257.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC----CCeEEEEeCCCChhhhcCCCcEEE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT----GAVVRGFLGQPQLENALTGMDLVI   93 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~----~~~v~~~~~t~dl~~al~~ADiVi   93 (369)
                      ++||+|||| |.+|++++..++.++++ +|+|+|+++  +.+.++|+.|...    ..+++.   ++|+ ++++|||+||
T Consensus        14 ~~kI~ViGa-G~vG~~iA~~la~~g~~-~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~---t~d~-~al~~aD~VI   87 (328)
T 2hjr_A           14 RKKISIIGA-GQIGSTIALLLGQKDLG-DVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFG---ENNY-EYLQNSDVVI   87 (328)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCC-EEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEE---ESCG-GGGTTCSEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCC-eEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEE---CCCH-HHHCCCCEEE
Confidence            369999999 99999999999999875 499999998  5677788887641    334554   4677 8999999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEec-hhcHHH
Q 017551           94 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVR  172 (369)
Q Consensus        94 i~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t-~Ld~~R  172 (369)
                      +++|.|++||++|.|++.+|++++++++++++++||++|++++|||++++++++    ++.++|||+||||+| .||++|
T Consensus        88 ~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~~~~t~~~----~~~~~~~~~rviG~~t~Ld~~R  163 (328)
T 2hjr_A           88 ITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITNPLDAMVYYF----KEKSGIPANKVCGMSGVLDSAR  163 (328)
T ss_dssp             ECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHH----HHHHCCCGGGEEESCHHHHHHH
T ss_pred             EcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecCchHHHHHHH----HHhcCCChhhEEEeCcHHHHHH
Confidence            999999999999999999999999999999999999999999999999987654    678899999999995 899999


Q ss_pred             HHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCC----------CCCHHHHHHHHhhhccchhhhhhhhccCCc
Q 017551          173 ANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEAKAGAGS  242 (369)
Q Consensus       173 ~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~----------~~~~~~~~~l~~~v~~~~~ev~~~k~g~g~  242 (369)
                      +++++|+++|++|++|+++|||+||+ +++|+||++++.+          .+++++++++.++++++|++|+++. ++|+
T Consensus       164 ~~~~la~~lgv~~~~v~~~v~G~Hg~-t~~p~~s~~~v~G~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~~-~~gs  241 (328)
T 2hjr_A          164 FRCNLSRALGVKPSDVSAIVVGGHGD-EMIPLTSSVTIGGILLSDFVEQGKITHSQINEIIKKTAFGGGEIVELL-KTGS  241 (328)
T ss_dssp             HHHHHHHHHTSCGGGEECCEEBCSST-TCEECGGGCEETTEEHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHHHH-SSCC
T ss_pred             HHHHHHHHhCCCHHHeeEEEecCCCC-ceeeeeeeceECCEEHHHHhhccCCCHHHHHHHHHHHHhhHHHHHhhh-CCCc
Confidence            99999999999999999999999998 9999999987642          1466778899999999999999963 6799


Q ss_pred             hhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHH
Q 017551          243 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQ  320 (369)
Q Consensus       243 ~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~  320 (369)
                      ++||+|.++++++++|++|.+   .+++++ +++|+| .+++|||+||++|++|+++++.+ +|+++|+++|++++..++
T Consensus       242 ~~~~~a~a~~~i~~ai~~~~~---~v~~~~v~~~G~~g~~~~~~~vP~~ig~~Gv~~i~~~-~L~~~e~~~l~~s~~~l~  317 (328)
T 2hjr_A          242 AFYAPAASAVAMAQAYLKDSK---SVLVCSTYLTGQYNVNNLFVGVPVVIGKNGIEDVVIV-NLSDDEKSLFSKSVESIQ  317 (328)
T ss_dssp             CCHHHHHHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHcCCC---cEEEEEEeecCccCCCceEEEEEEEEeCCeeEEecCC-CCCHHHHHHHHHHHHHHH
Confidence            999999999999999999865   477775 889998 57999999999999999999985 999999999999996666


Q ss_pred             HHHHhh
Q 017551          321 DWLGES  326 (369)
Q Consensus       321 ~~l~~~  326 (369)
                      +.+++.
T Consensus       318 ~~~~~~  323 (328)
T 2hjr_A          318 NLVQDL  323 (328)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            665544

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=100.00  E-value=3.6e-54  Score=416.56  Aligned_cols=290  Identities=30%  Similarity=0.493  Sum_probs=255.9

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhccc----CCCeEEEEeCCCChhhhcCCCcEEEE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD----TGAVVRGFLGQPQLENALTGMDLVII   94 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~----~~~~v~~~~~t~dl~~al~~ADiVii   94 (369)
                      |||+|||| |.+|++++..|+.++...+|+|+|+++  +.+..+|+.|..    ...++..   ++|++ ++++||+||+
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~---t~d~~-~l~~aDvVii   75 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTG---SNDYA-DTANSDIVII   75 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEE---ESCGG-GGTTCSEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEE---CCCHH-HHCCCCEEEE
Confidence            69999999 999999999999886667999999987  567777887752    1234443   35764 5999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHH
Q 017551           95 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA  173 (369)
Q Consensus        95 ~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~  173 (369)
                      +++.|++||++|.|++.+|+++++++++.+++++|+++++++|||++++++++    ++.+++|++|+||+ |+||+.|+
T Consensus        76 av~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~~~~~~~~----~~~~~~~~~rviG~gt~ld~~r~  151 (310)
T 1guz_A           76 TAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPLDIMTHVA----WVRSGLPKERVIGMAGVLDAARF  151 (310)
T ss_dssp             CCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCSSHHHHHHHH----HHHHCSCGGGEEEECHHHHHHHH
T ss_pred             eCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcCchHHHHHHH----HHhcCCChHHEEECCCchHHHHH
Confidence            99999999999999999999999999999999999999999999999987654    67789999999999 99999999


Q ss_pred             HHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCCC-----CCHHHHHHHHhhhccchhhhhhhhccCCchhhHHH
Q 017551          174 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCS-----FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMA  248 (369)
Q Consensus       174 ~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~~-----~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~s~A  248 (369)
                      ++++|+++|+++++|+++|||+||+ +++|+||++++.+.     +++++++++.+++++++++|++. .++|+++|++|
T Consensus       152 ~~~la~~l~v~~~~v~~~v~G~Hg~-~~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~v~~~g~~ii~~-~~kgs~~~~~a  229 (310)
T 1guz_A          152 RSFIAMELGVSMQDINACVLGGHGD-AMVPVVKYTTVAGIPISDLLPAETIDKLVERTRNGGAEIVEH-LKQGSAFYAPA  229 (310)
T ss_dssp             HHHHHHHHTCCGGGEECCEEECSGG-GEEECGGGCEETTEEHHHHSCHHHHHHHHHHHHTHHHHHHHH-HSSSCCCHHHH
T ss_pred             HHHHHHHhCCCHHHeEEEEEcccCC-cEeeeeecccCCCEEHHHHCCHHHHHHHHHHHHHhHHHHHhh-cCCCCcHHHHH
Confidence            9999999999999999999999997 99999999987431     46788999999999999999996 36789999999


Q ss_pred             HHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHHHHh
Q 017551          249 YAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWLGE  325 (369)
Q Consensus       249 ~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~l~~  325 (369)
                      .++++++++|++|.+   .+++++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++++..+++.+++
T Consensus       230 ~a~~~~~~ai~~~~~---~~~~~~~~~~g~~g~~~~~~~~P~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~~  304 (310)
T 1guz_A          230 SSVVEMVESIVLDRK---RVLPCAVGLEGQYGIDKTFVGVPVKLGRNGVEQIYEI-NLDQADLDLLQKSAKIVDENCKM  304 (310)
T ss_dssp             HHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHcCCC---cEEEEEEeecCccCCcceEEEEEEEEeCCeeEEEcCC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999865   477774 889998 57999999999999999999995 99999999999999555554443

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=100.00  E-value=4e-54  Score=419.52  Aligned_cols=297  Identities=21%  Similarity=0.280  Sum_probs=253.5

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCC-----cEEEEEeCC----C--chhHHHHhhcccCCCeEEEEeCCCChhhhc
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLV-----SVLHLYDVV----N--TPGVTADISHMDTGAVVRGFLGQPQLENAL   86 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~-----~el~L~D~~----~--~~g~~~dL~~~~~~~~v~~~~~t~dl~~al   86 (369)
                      ++++||+||||+|+||+++++.|+++++.     .+|+|+|++    +  +.+.++||.|......... ..++|+++++
T Consensus         3 ~~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i-~~~~~~~~al   81 (329)
T 1b8p_A            3 KTPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGM-TAHADPMTAF   81 (329)
T ss_dssp             CCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEE-EEESSHHHHT
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcE-EEecCcHHHh
Confidence            35689999999899999999999988865     499999998    5  5788999999642222222 2256888999


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCChhHHHHHHHHHhC-CCCCCcEEE
Q 017551           87 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAG-TYDPKKLLG  164 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~i~ae~~~~~~-~~~~~kviG  164 (369)
                      +|||+||++||.|+++|++|.+++.+|+++++++++++.++| |++|++++|||+|++|+++    ++.+ +||++|++|
T Consensus        82 ~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~~~----~~~~~~~p~~~v~g  157 (329)
T 1b8p_A           82 KDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIA----MKSAPSLPAKNFTA  157 (329)
T ss_dssp             TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHH----HHTCTTSCGGGEEE
T ss_pred             CCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHHHH----HHHcCCCCHHHEEE
Confidence            999999999999999999999999999999999999999998 9999999999999999766    5666 999999999


Q ss_pred             echhcHHHHHHHHHHHhCCCCCCCce-eEEeecCCCccccccccCCCCCC-----CCHHH--HHHHHhhhccchhhhhhh
Q 017551          165 VTMLDVVRANTFVAEVLGLDPRDVDV-PVVGGHAGVTILPLLSQVKPPCS-----FTQEE--TEYLTNRIQNGGTEVVEA  236 (369)
Q Consensus       165 ~t~Ld~~R~~~~la~~lgv~~~~V~~-~viG~hg~~~~vp~~S~~~~~~~-----~~~~~--~~~l~~~v~~~~~ev~~~  236 (369)
                      +|.||+.|+++++|+++|++|++|+. +|||+||+ +++|+||++++.+.     +++++  .+++.++++++++||++.
T Consensus       158 ~t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~Hg~-s~~p~~s~~~v~g~~~~~~~~~~~~~~~~i~~~v~~~g~eii~~  236 (329)
T 1b8p_A          158 MLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNHSP-TMYADYRYAQIDGASVKDMINDDAWNRDTFLPTVGKRGAAIIDA  236 (329)
T ss_dssp             CCHHHHHHHHHHHHHHHTCCGGGEESCEEEBCSST-TCEEECSSCEETTEEHHHHHCCHHHHHHTHHHHHHTHHHHHHHH
T ss_pred             eecHHHHHHHHHHHHHhCcCHHHceEEEEEeccCC-cEeeehHHCeECCeeHHHHhccchhhHHHHHHHHHHHHHhhhhc
Confidence            99999999999999999999999995 68999998 99999999987531     22233  378999999999999998


Q ss_pred             hccCCchhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC--CCccEEEEEEEEcCCCeEEEcc-CCCCCHHHHHHH
Q 017551          237 KAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQ-LGPLNEYESGLF  312 (369)
Q Consensus       237 k~g~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~lg~~Gv~~~~~-~~~L~~~E~~~L  312 (369)
                      | |. ++++++|+++++++++|+++..+  .+++++ +++|+|  ++++|||+||+| ++|++++++ + +|+++|+++|
T Consensus       237 k-g~-~~~~~~a~a~~~~~~ai~~~~~~--~~~~~s~~~~g~yg~~~~~~~s~P~~i-~~Gv~~i~~~~-~l~~~e~~~l  310 (329)
T 1b8p_A          237 R-GV-SSAASAANAAIDHIHDWVLGTAG--KWTTMGIPSDGSYGIPEGVIFGFPVTT-ENGEYKIVQGL-SIDAFSQERI  310 (329)
T ss_dssp             H-SS-CCHHHHHHHHHHHHHHHHHCCTT--CCEEEEEECCSGGGCCTTCEEEEEEEE-ETTEEEECCCC-CCCHHHHHHH
T ss_pred             c-CC-ChHHHHHHHHHHHHHHHhcCCCC--cEEEEEEEecCccCCCCCeEEEEEEEE-cCCEEEecCCC-CCCHHHHHHH
Confidence            7 43 44566788999999999998432  366675 789988  689999999999 999999997 6 9999999999


Q ss_pred             HHHHHHHHHHHHhh
Q 017551          313 CLLHLCFQDWLGES  326 (369)
Q Consensus       313 ~~~~~~i~~~l~~~  326 (369)
                      ++++..+++.++..
T Consensus       311 ~~s~~~l~~~~~~~  324 (329)
T 1b8p_A          311 NVTLNELLEEQNGV  324 (329)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99996665555444

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=100.00  E-value=6.5e-54  Score=413.72  Aligned_cols=282  Identities=23%  Similarity=0.317  Sum_probs=226.3

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC-CCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~-~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      |||+|||| |.+|++++..|+.+++.++|+|+|+++  +.+.++|+.|... ....+...  +++ ++++|||+||+++|
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~--~~~-~a~~~aDvVIi~~~   76 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH--GGH-SELADAQVVILTAG   76 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE--ECG-GGGTTCSEEEECC-
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE--CCH-HHhCCCCEEEEcCC
Confidence            69999999 999999999999999889999999987  5778899988652 12333322  354 78999999999999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHHHHH
Q 017551           98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTF  176 (369)
Q Consensus        98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~~~~  176 (369)
                      .|++||++|+|++.+|++++++++++++++||++|++++|||++++++++    ++.+  |++||||+ |+||+.|++++
T Consensus        77 ~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~~~~~~~~----~~~~--~~~rviG~gt~Ld~~r~~~~  150 (304)
T 2v6b_A           77 ANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVDLLTDLA----TQLA--PGQPVIGSGTVLDSARFRHL  150 (304)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSHHHHHHHH----HHHS--CSSCEEECTTHHHHHHHHHH
T ss_pred             CCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCchHHHHHHH----HHhC--ChhcEEeCCcCchHHHHHHH
Confidence            99999999999999999999999999999999999999999999988655    5554  89999999 99999999999


Q ss_pred             HHHHhCCCCCCCceeEEeecCCCccccccccCCCCCC------------CCHHHHHHHHhhhccchhhhhhhhccCCchh
Q 017551          177 VAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCS------------FTQEETEYLTNRIQNGGTEVVEAKAGAGSAT  244 (369)
Q Consensus       177 la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~~------------~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~  244 (369)
                      +|+++|+++++|+++||||||+ +++|+||++++.+.            ++++.++++.+++++++++|++   ++|+++
T Consensus       151 la~~l~v~~~~v~~~v~G~Hg~-~~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~eii~---~kg~t~  226 (304)
T 2v6b_A          151 MAQHAGVDGTHAHGYVLGEHGD-SEVLAWSSAMVAGMPVADFMQAQNLPWNEQVRAKIDEGTRNAAASIIE---GKRATY  226 (304)
T ss_dssp             HHHHHTSCGGGEECCEEESSST-TEEECGGGCEETTEEHHHHHHHHTCCCSHHHHHHHHHHHTC--------------CC
T ss_pred             HHHHhCcCHHHceEEEecCCCC-ceeeehhHccCCCEEHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHh---ccCCcH
Confidence            9999999999999999999998 99999999987431            4666789999999999999999   568999


Q ss_pred             hHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCCCCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 017551          245 LSMAYAAVKFADACLRGLRGDAGVVECA-FVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWL  323 (369)
Q Consensus       245 ~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~l  323 (369)
                      |++|.++++++++|++|.+   .+++++ +++| |.  +|||+||++|++|+++++++ +|+++|+++|++++..+++.+
T Consensus       227 ~~~a~a~~~~~~ai~~~~~---~~~~~~~~~~g-yg--~~~~~P~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~  299 (304)
T 2v6b_A          227 YGIGAALARITEAVLRDRR---AVLTVSAPTPE-YG--VSLSLPRVVGRQGVLSTLHP-KLTGDEQQKLEQSAGVLRGFK  299 (304)
T ss_dssp             HHHHHHHHHHHHHHHTTCC---EEEEEEEEETT-TT--EEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHHHHHhCCC---cEEEEEEEECC-cC--cEEEEEEEEeCCeeEEEcCC-CCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999855   367775 8899 84  99999999999999999995 999999999999995444433

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=100.00  E-value=1.1e-50  Score=393.52  Aligned_cols=290  Identities=26%  Similarity=0.432  Sum_probs=251.5

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC-CCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~-~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      |||+|||| |.+|++++..|+..++.++|+|+|+++  +.+...|+.|... ....+... + |+ +++++||+||++++
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~-~-d~-~~~~~aDvViiav~   76 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA-G-DY-ADLKGSDVVIVAAG   76 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE-C-CG-GGGTTCSEEEECCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEe-C-CH-HHhCCCCEEEEccC
Confidence            69999999 999999999999888888999999987  4566667766431 11222222 2 54 78999999999999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHHHHH
Q 017551           98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTF  176 (369)
Q Consensus        98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~~~~  176 (369)
                      .|++||++|.|++.+|++++++++++|++++|+++++++|||++++++++    ++.++||++||||+ |.||+.|++++
T Consensus        77 ~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~~~~~~~----~~~~~~~~~rviG~~t~ld~~r~~~~  152 (319)
T 1a5z_A           77 VPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVDVLTYFF----LKESGMDPRKVFGSGTVLDTARLRTL  152 (319)
T ss_dssp             CCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHH----HHHHTCCTTTEEECTTHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcHHHHHHHH----HHHhCCChhhEEeeCccHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999987654    66778999999999 78999999999


Q ss_pred             HHHHhCCCCCCCceeEEeecCCCccccccccCCCCC----------C-CCHHHHHHHHhhhccchhhhhhhhccCCchhh
Q 017551          177 VAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------S-FTQEETEYLTNRIQNGGTEVVEAKAGAGSATL  245 (369)
Q Consensus       177 la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~----------~-~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~  245 (369)
                      +|+++|++|++|+++|||+||. +++|+||++++.+          . ++++.++++.++++++++++++.   +|+++|
T Consensus       153 la~~lgv~~~~v~~~v~G~hg~-~~~p~~s~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~---kg~~~~  228 (319)
T 1a5z_A          153 IAQHCGFSPRSVHVYVIGEHGD-SEVPVWSGAMIGGIPLQNMCQVCQKCDSKILENFAEKTKRAAYEIIER---KGATHY  228 (319)
T ss_dssp             HHHHHTCCGGGEECCEEBCSST-TCEECGGGCEETTEEHHHHHTTSSSCCHHHHHHHHHHHHHHHHHHHHH---HSCCCH
T ss_pred             HHHHhCcCHHHceEEEEeCCCC-CcccchhhceECCEEHHHHhhcccccCHHHHHHHHHHHHHhhhhhhcc---CCchHH
Confidence            9999999999999999999998 9999999987632          1 46677889999999999999995   488999


Q ss_pred             HHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 017551          246 SMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWL  323 (369)
Q Consensus       246 s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~l  323 (369)
                      ++|.++++++++|++|.+   .+++++ +++|.| .+++|||+||++|++|+++++.+ +|+++|+++|++++..++..+
T Consensus       229 ~~a~a~~~~~~ai~~~~~---~~~~~~~~~~g~~g~~~~~~~vP~~vg~~Gv~~i~~~-~L~~~e~~~l~~s~~~l~~~~  304 (319)
T 1a5z_A          229 AIALAVADIVESIFFDEK---RVLTLSVYLEDYLGVKDLCISVPVTLGKHGVERILEL-NLNEEELEAFRKSASILKNAI  304 (319)
T ss_dssp             HHHHHHHHHHHHHHTTCC---EEEEEEEEESSBTTBCSEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCC---CEEEEEEEecCccCccceEEEEEEEEeCCceEEEecC-CCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999855   367775 889998 57999999999999999999995 999999999999996665555


Q ss_pred             Hhh
Q 017551          324 GES  326 (369)
Q Consensus       324 ~~~  326 (369)
                      ++.
T Consensus       305 ~~~  307 (319)
T 1a5z_A          305 NEI  307 (319)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            544

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=100.00  E-value=1e-48  Score=379.20  Aligned_cols=292  Identities=30%  Similarity=0.459  Sum_probs=254.6

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhccc----CCCeEEEEeCCCChhhhcCCCcEE
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD----TGAVVRGFLGQPQLENALTGMDLV   92 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~----~~~~v~~~~~t~dl~~al~~ADiV   92 (369)
                      +++||+|||| |.+|++++..|+..++. +|+|+|+++  +.+..+|+.+..    ...++..   ++|+ +++++||+|
T Consensus         3 ~~~kI~VIGa-G~~G~~ia~~la~~g~~-~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~---t~d~-~a~~~aDiV   76 (317)
T 2ewd_A            3 ERRKIAVIGS-GQIGGNIAYIVGKDNLA-DVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIG---TDDY-ADISGSDVV   76 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCC-EEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE---ESCG-GGGTTCSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCc-eEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEE---CCCH-HHhCCCCEE
Confidence            4579999999 99999999999988864 699999987  455567777653    1234553   3576 789999999


Q ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHH
Q 017551           93 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVV  171 (369)
Q Consensus        93 ii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~  171 (369)
                      |+++|.|++||++|+|++.+|+++++++++++++++|+++++++|||++++++.+    ++.+++||+|++|+ |.+|+.
T Consensus        77 i~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp~~~~~~~~----~~~~~~~~~rviG~~t~ld~~  152 (317)
T 2ewd_A           77 IITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNPLDVMVSHF----QKVSGLPHNKVCGMAGVLDSS  152 (317)
T ss_dssp             EECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHH----HHHHCCCGGGEEESCHHHHHH
T ss_pred             EEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHH----HHhhCCCHHHEEeccCcHHHH
Confidence            9999999999999999999999999999999999999999999999999987654    56778999999999 689999


Q ss_pred             HHHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCC----------CCCHHHHHHHHhhhccchhhhhhhhccCC
Q 017551          172 RANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEAKAGAG  241 (369)
Q Consensus       172 R~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~----------~~~~~~~~~l~~~v~~~~~ev~~~k~g~g  241 (369)
                      |++.++++++|+++++++++|+|+||+ +++|+||++++.+          .++.++++++.++++.+++++++.. |+|
T Consensus       153 r~~~~la~~lg~~~~~v~~~v~g~Hg~-~~~~~~~~a~v~g~~~~~~~~~g~~~~~~id~~~~~~~~~~~ei~~~~-g~g  230 (317)
T 2ewd_A          153 RFRTFIAQHFGVNASDVSANVIGGHGD-GMVPATSSVSVGGVPLSSFIKQGLITQEQIDEIVCHTRIAWKEVADNL-KTG  230 (317)
T ss_dssp             HHHHHHHHHHTSCGGGEECCEEBCSST-TCEECGGGCEETTEEHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHH-SSS
T ss_pred             HHHHHHHHHhCcChhhceEEEEecCCC-ceeEEeeccccCCEEHHHHHhccCCCHHHHHHHHHHHHhhHHHHHHhh-cCC
Confidence            999999999999999999999999998 9999999986532          1467778888888888999999863 678


Q ss_pred             chhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHH
Q 017551          242 SATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCF  319 (369)
Q Consensus       242 ~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i  319 (369)
                      +++|++|.++++++++|++|.+   .+++++ +++|+| .++.|||+||++|++|+++++.+ +|+++|+++|++++..+
T Consensus       231 ~~~~~~a~a~~~~~~ai~~~~~---~~~~~~~~~~G~~g~~~~~~~~P~~i~~~Gv~~i~~~-~l~~~e~~~l~~s~~~l  306 (317)
T 2ewd_A          231 TAYFAPAAAAVKMAEAYLKDKK---AVVPCSAFCSNHYGVKGIYMGVPTIIGKNGVEDILEL-DLTPLEQKLLGESINEV  306 (317)
T ss_dssp             CCCHHHHHHHHHHHHHHHTTCC---EEEEEEEEESSSTTCSSEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHcCCC---eEEEEEEEecCccCCcceEEEeEEEEcCCeeEEecCC-CCCHHHHHHHHHHHHHH
Confidence            9999999999999999998765   477775 789998 57999999999999999999985 99999999999999777


Q ss_pred             HHHHHhh
Q 017551          320 QDWLGES  326 (369)
Q Consensus       320 ~~~l~~~  326 (369)
                      ++.+++.
T Consensus       307 ~~~~~~~  313 (317)
T 2ewd_A          307 NTISKVL  313 (317)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            6666554

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=100.00  E-value=6e-49  Score=379.40  Aligned_cols=287  Identities=20%  Similarity=0.266  Sum_probs=245.0

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC--CCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~--~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      |||+|||+ |.+|++++..|+..++..+|+|+|+++  +.+.+.|+.|...  ...++..+  +|+ +++++||+||+++
T Consensus         2 ~kI~VIGa-G~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~d~-~~~~~aDvViiav   77 (309)
T 1hyh_A            2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI--NDW-AALADADVVISTL   77 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEE--SCG-GGGTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEe--CCH-HHhCCCCEEEEec
Confidence            69999998 999999999999888656999999987  4566777776531  12344432  466 7899999999999


Q ss_pred             CCCCC----CCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHH
Q 017551           97 GVPRK----PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVV  171 (369)
Q Consensus        97 g~p~k----~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~  171 (369)
                      +.|++    ||++|+|++.+|+++++++++.+.+++|+++++++|||+++++++    +++.+++|++|++|+ |+||+.
T Consensus        78 ~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~~~~~~----~~~~~~~~~~rvig~gt~ld~~  153 (309)
T 1hyh_A           78 GNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVISNPVDVITAL----FQHVTGFPAHKVIGTGTLLDTA  153 (309)
T ss_dssp             SCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHH----HHHHHCCCGGGEEECTTHHHHH
T ss_pred             CCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCcHHHHHHH----HHHhcCCCHHHEeecCccchHH
Confidence            99999    999999999999999999999999999999999999999998754    477789999999999 999999


Q ss_pred             HHHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCC----C---CCHHHHHHHHhhhccchhhhhhhhccCCchh
Q 017551          172 RANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----S---FTQEETEYLTNRIQNGGTEVVEAKAGAGSAT  244 (369)
Q Consensus       172 R~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~----~---~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~  244 (369)
                      |++.++++.++++++++++++||+||+ +++|+||++.+.+    .   ++++.|+++.+++++++++|++.|   |+++
T Consensus       154 r~~~~~a~~l~~~~~~v~~~v~G~hg~-~~~~~~s~~~v~g~~~~~~~~~~~~~~~~~~~~v~~~g~~ii~~k---g~~~  229 (309)
T 1hyh_A          154 RMQRAVGEAFDLDPRSVSGYNLGEHGN-SQFVAWSTVRVMGQPIVTLADAGDIDLAAIEEEARKGGFTVLNGK---GYTS  229 (309)
T ss_dssp             HHHHHHHHHHTCCGGGCBCCEEBCTTT-TCEECTTTCEETTEEGGGC-----CCHHHHHHHHHHHHHHHHHHH---SSCC
T ss_pred             HHHHHHHHHhCCChhheEEEEEeCCCC-cEeeccccceECCEEHHHhccCCHHHHHHHHHHHHHhHHHHHhcc---CCch
Confidence            999999999999999999999999998 9999999987642    1   456778999999999999999965   7899


Q ss_pred             hHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCCCCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 017551          245 LSMAYAAVKFADACLRGLRGDAGVVECA-FVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWL  323 (369)
Q Consensus       245 ~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~l  323 (369)
                      |++|.++++++++|++|.+   .+++++ +++|   ++.|+|+||++|++|+++++.+ +|+++|+++|++++..+++.+
T Consensus       230 ~~~a~a~~~~~~ai~~~~~---~~~~~~~~~~g---~~~~~~vP~~i~~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~  302 (309)
T 1hyh_A          230 YGVATSAIRIAKAVMADAH---AELVVSNRRDD---MGMYLSYPAIIGRDGVLAETTL-DLTTDEQEKLLQSRDYIQQRF  302 (309)
T ss_dssp             HHHHHHHHHHHHHHHTTCC---EEEEEEEECTT---TCSEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCC---cEEEEEEEECC---CCeEEEEEEEEeCCceEEEeCC-CCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999876   377775 7888   7999999999999999999985 999999999999997776666


Q ss_pred             Hhh
Q 017551          324 GES  326 (369)
Q Consensus       324 ~~~  326 (369)
                      ++.
T Consensus       303 ~~~  305 (309)
T 1hyh_A          303 DEI  305 (309)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            555

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=100.00  E-value=1.5e-44  Score=351.09  Aligned_cols=299  Identities=23%  Similarity=0.325  Sum_probs=248.8

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCC-----cEEEEEeCCC----chhHHHHhhcccCCCeEEEEeCCCChhhhcCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLV-----SVLHLYDVVN----TPGVTADISHMDTGAVVRGFLGQPQLENALTG   88 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~-----~el~L~D~~~----~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~   88 (369)
                      +++|||+|+||+|+||++++..|+.++..     .+|+|+|++.    ..+.++||.|..... +.....+++++++++|
T Consensus         2 ~~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~-~~di~~~~~~~~a~~~   80 (327)
T 1y7t_A            2 KAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPL-LAGLEATDDPKVAFKD   80 (327)
T ss_dssp             CCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTT-EEEEEEESCHHHHTTT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccc-cCCeEeccChHHHhCC
Confidence            34689999999999999999999988764     4999999974    457788998864211 1212223567889999


Q ss_pred             CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCChhHHHHHHHHHhC-CCCCCcEEEec
Q 017551           89 MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAG-TYDPKKLLGVT  166 (369)
Q Consensus        89 ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~i~ae~~~~~~-~~~~~kviG~t  166 (369)
                      +|+||++||.++++|++|.+++..|+.+++++++++++++ |+++++++|||++.++++.    ++.+ +++|+++.|.|
T Consensus        81 ~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~----~~~~~~~~p~~~yg~t  156 (327)
T 1y7t_A           81 ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIA----YKNAPGLNPRNFTAMT  156 (327)
T ss_dssp             CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHH----HHTCTTSCGGGEEECC
T ss_pred             CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHH----HHHcCCCChhheeccc
Confidence            9999999999999999999999999999999999999998 9999999999998887754    4555 78999999999


Q ss_pred             hhcHHHHHHHHHHHhCCCCCCCce-eEEeecCCCccccccccCCCCC----CC-CHHH-HHHHHhhhccchhhhhhhhcc
Q 017551          167 MLDVVRANTFVAEVLGLDPRDVDV-PVVGGHAGVTILPLLSQVKPPC----SF-TQEE-TEYLTNRIQNGGTEVVEAKAG  239 (369)
Q Consensus       167 ~Ld~~R~~~~la~~lgv~~~~V~~-~viG~hg~~~~vp~~S~~~~~~----~~-~~~~-~~~l~~~v~~~~~ev~~~k~g  239 (369)
                      .+|+.|+..++++.+|+++..++. +|+|+|++ +++|.|+++.+.+    .+ +++. ++++.++++++|+||++.| |
T Consensus       157 kl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~v~~~g~~ii~~k-g  234 (327)
T 1y7t_A          157 RLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSS-TMFPDLFHAEVDGRPALELVDMEWYEKVFIPTVAQRGAAIIQAR-G  234 (327)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST-TCEEECSSCEETTEEGGGTSCHHHHHHTHHHHHHHHHHHHHHHH-S
T ss_pred             hHHHHHHHHHHHHHhCcChhheeeeEEEcCCCC-eEEEEeeeeeeCCeeHHHhccchhHHHHHHHHHHHHHHHHHHcc-C
Confidence            999999999999999999999985 78999998 8999999987643    12 3322 4789999999999999987 3


Q ss_pred             CCchhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC--CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHH
Q 017551          240 AGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLH  316 (369)
Q Consensus       240 ~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~  316 (369)
                       +++++++|+++++++++|++|++. +.+++++ +++|+|  ++++|||+||++ ++|++++++.++|+++|+++|++++
T Consensus       235 -~~~~~~~a~a~~~~~~~i~~~~~~-~~~~~~~~~~~g~yg~~~~~~~~~P~~i-~~G~~~i~~~~~l~~~e~~~l~~s~  311 (327)
T 1y7t_A          235 -ASSAASAANAAIEHIRDWALGTPE-GDWVSMAVPSQGEYGIPEGIVYSFPVTA-KDGAYRVVEGLEINEFARKRMEITA  311 (327)
T ss_dssp             -SCCHHHHHHHHHHHHHHHHTBCCT-TCCEEEEEECSSGGGCCTTSEEEEEEEE-ETTEEEECCCCCCCHHHHHHHHHHH
T ss_pred             -CCchHHHHHHHHHHHHHHHcCCCC-CeEEEEEEEecCccCCCCCeEEEEEEEE-cCCeEEecCCCCCCHHHHHHHHHHH
Confidence             345567899999999999999631 2367775 789998  689999999999 9999999873499999999999999


Q ss_pred             HHHHHHHHhh
Q 017551          317 LCFQDWLGES  326 (369)
Q Consensus       317 ~~i~~~l~~~  326 (369)
                      ..+++.++..
T Consensus       312 ~~l~~~~~~~  321 (327)
T 1y7t_A          312 QELLDEMEQV  321 (327)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            6665555444

>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A

Probab=100.00  E-value=5.7e-44  Score=357.53  Aligned_cols=289  Identities=13%  Similarity=0.112  Sum_probs=226.7

Q ss_pred             CCCEEEEEcCCCcc-HHHHHHHHHh--CCC-CcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEE
Q 017551           19 AGFKVAILGAAGGI-GQPLAMLMKI--NPL-VSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLV   92 (369)
Q Consensus        19 ~~~KI~IiGA~G~v-Gs~la~~l~~--~~~-~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiV   92 (369)
                      +.+||+|||| |++ +..++..|+.  .++ ++||+|||+++  +.+ +.|+.+.......++. .++|+++|++|||||
T Consensus         1 ~~~KI~IIGa-G~v~~~~l~~~l~~~~~~l~~~el~L~Di~~~~~~~-~~~~~~~~~~~~~~v~-~t~d~~~al~~AD~V   77 (417)
T 1up7_A            1 RHMRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKI-VVDFVKRLVKDRFKVL-ISDTFEGAVVDAKYV   77 (417)
T ss_dssp             CCCEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHH-HHHHHHHHHTTSSEEE-ECSSHHHHHTTCSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcccCCCcCEEEEEeCCHHHHHH-HHHHHHHHhhCCeEEE-EeCCHHHHhCCCCEE
Confidence            4579999999 765 3333334455  566 89999999998  233 5566553211113332 257888999999999


Q ss_pred             EEcCCCCCCCCCCHHH--------------------HHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHH
Q 017551           93 IIPAGVPRKPGMTRDD--------------------LFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFK  152 (369)
Q Consensus        93 ii~ag~p~k~g~~r~~--------------------~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~  152 (369)
                      |+++|++++||++|++                    ++.+|++++++++++|+++| +||+|++|||++++|++    ++
T Consensus        78 iitagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~~~~-~A~lin~TNPvdi~t~a----~~  152 (417)
T 1up7_A           78 IFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTS-NATIVNFTNPSGHITEF----VR  152 (417)
T ss_dssp             EECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHTT-CCEEEECSSSHHHHHHH----HH
T ss_pred             EEcCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHHHHC-CEEEEEeCChHHHHHHH----HH
Confidence            9999999988888743                    46899999999999999999 99999999999999854    47


Q ss_pred             HhCCCCCCcEEEechhcHHHHHHHHHHHhCCCCCCCceeEEe-----------ecCCCccccccccC---CCCC----CC
Q 017551          153 KAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG-----------GHAGVTILPLLSQV---KPPC----SF  214 (369)
Q Consensus       153 ~~~~~~~~kviG~t~Ld~~R~~~~la~~lgv~~~~V~~~viG-----------~hg~~~~vp~~S~~---~~~~----~~  214 (369)
                      +.+  |++||||+|+.. .|+++++|+.+|++|++|+++++|           +||+ +++|.||..   ++.+    ++
T Consensus       153 k~~--p~~rviG~c~~~-~r~~~~la~~lgv~~~~v~~~v~GlNH~~w~~~~~~hG~-d~~p~~~~~~~~~~~~~~~~~~  228 (417)
T 1up7_A          153 NYL--EYEKFIGLCNVP-INFIREIAEMFSARLEDVFLKYYGLNHLSFIEKVFVKGE-DVTEKVFENLKLKLSNIPDEDF  228 (417)
T ss_dssp             HTT--CCSSEEECCSHH-HHHHHHHHHHTTCCGGGEEEEEEEETTEEEEEEEEETTE-ECHHHHHHHHTTC---CCTTSC
T ss_pred             HhC--CCCCEEEeCCCH-HHHHHHHHHHhCCCHHHCeEEEEeecceeeEEEeecCCc-EehhhHHHHHHHhhCCCcCCch
Confidence            774  777999998754 599999999999999999999999           9998 999999985   3321    12


Q ss_pred             ---------------------CHHHHHHH---------Hhhhccchhhhh--------hhhccCCchhhHHHHHHHHHHH
Q 017551          215 ---------------------TQEETEYL---------TNRIQNGGTEVV--------EAKAGAGSATLSMAYAAVKFAD  256 (369)
Q Consensus       215 ---------------------~~~~~~~l---------~~~v~~~~~ev~--------~~k~g~g~~~~s~A~a~~~li~  256 (369)
                                           +++.++++         .+++++++++++        +. .++|++.|  |.+++++++
T Consensus       229 ~~~~~~~~g~~p~~y~~~y~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~~~~~~~~~l-~~kg~t~~--~~~a~~ii~  305 (417)
T 1up7_A          229 PTWFYDSVRLIVNPYLRYYLMEKKMFKKISTHELRAREVMKIEKELFEKYRTAVEIPEEL-TKRGGSMY--STAAAHLIR  305 (417)
T ss_dssp             CHHHHHHHCSEECGGGHHHHTHHHHHHHHHTSCCHHHHHHHHHHHHHHHHTTCSSCCGGG-GGSTTTTH--HHHHHHHHH
T ss_pred             HHHHHHhcCCCccchhhhccCCHHHHHhccccchHHHHHHHHHHHHHHHHHhhcccchhh-hhcCCcHH--HHHHHHHHH
Confidence                                 23333444         456667778887        22 24577755  689999999


Q ss_pred             HHHhccCCCCceeEEE-eecCCC---CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHHHHhh
Q 017551          257 ACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWLGES  326 (369)
Q Consensus       257 ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~l~~~  326 (369)
                      ||++|.+   .+++++ +++|.|   |+|+++|+||+||++|++++.. ++|+++|++++++.+...+..++..
T Consensus       306 AI~~d~~---~~~~vsv~n~G~i~~lp~d~~vevP~~vg~~Gi~~i~~-~~L~~~e~~~l~~~~~~e~l~veA~  375 (417)
T 1up7_A          306 DLETDEG---KIHIVNTRNNGSIENLPDDYVLEIPCYVRSGRVHTLSQ-GKGDHFALSFIHAVKMYERLTIEAY  375 (417)
T ss_dssp             HHHSSSC---EEEEEEEECTTSSTTSCTTCEEEEEEEEETTEEEEBCC-CCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHcCCC---eEEEEEEecCCccCCCCCCeEEEEeEEEeCCceEEeec-CCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            9999866   477776 789987   5899999999999999999998 5999999999999998777777665

>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2

Probab=100.00  E-value=9.3e-43  Score=351.85  Aligned_cols=287  Identities=16%  Similarity=0.168  Sum_probs=222.7

Q ss_pred             CCEEEEEcCCCcc-HHHHHHHHHh--CCC-CcEEEEEeCCC--chhH-HHHhhc-----ccCCCeEEEEeCCCChhhhcC
Q 017551           20 GFKVAILGAAGGI-GQPLAMLMKI--NPL-VSVLHLYDVVN--TPGV-TADISH-----MDTGAVVRGFLGQPQLENALT   87 (369)
Q Consensus        20 ~~KI~IiGA~G~v-Gs~la~~l~~--~~~-~~el~L~D~~~--~~g~-~~dL~~-----~~~~~~v~~~~~t~dl~~al~   87 (369)
                      ++||+|||| |++ |..++..|+.  .++ ..||+|||+++  .+.. +.|+.+     .....+++.   ++|+++|++
T Consensus         7 ~~KIaVIGa-Gsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~~~~~~~~~~~~~~~i~~---t~D~~eal~   82 (450)
T 1s6y_A            7 RLKIATIGG-GSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHL---TLDRRRALD   82 (450)
T ss_dssp             CEEEEEETT-TCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEE---ESCHHHHHT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHHHHHHHHhhcCCCcEEEE---eCCHHHHhC
Confidence            579999999 887 7777777776  556 78999999987  3221 223332     222344543   468889999


Q ss_pred             CCcEEEEcCCCCCCCCCCHHHH--------------------HHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHH
Q 017551           88 GMDLVIIPAGVPRKPGMTRDDL--------------------FNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIA  147 (369)
Q Consensus        88 ~ADiVii~ag~p~k~g~~r~~~--------------------~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~  147 (369)
                      |||+||+++|.++++|++|+++                    +.+|++++++++++|+++||+||++++|||+|++|++ 
T Consensus        83 gAD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tNPvdivT~a-  161 (450)
T 1s6y_A           83 GADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPAGMVTEA-  161 (450)
T ss_dssp             TCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHH-
T ss_pred             CCCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-
Confidence            9999999999999998888744                    8999999999999999999999999999999998854 


Q ss_pred             HHHHHHhCCCCCCcEEEechhcHHHHHHHHHHHhCCCCCCCceeEEe-----------ecCCCccccccccCCCC-----
Q 017551          148 AEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG-----------GHAGVTILPLLSQVKPP-----  211 (369)
Q Consensus       148 ae~~~~~~~~~~~kviG~t~Ld~~R~~~~la~~lgv~~~~V~~~viG-----------~hg~~~~vp~~S~~~~~-----  211 (369)
                         +++.+  |++||||+|++. .|+++++|+.||++|++|+++++|           +||+ +++|.|+.....     
T Consensus       162 ---~~k~~--p~~rViG~c~~~-~r~~~~la~~lgv~~~~v~~~v~GlNH~~w~~~v~~~G~-d~~p~~~~~~~~~~~~g  234 (450)
T 1s6y_A          162 ---VLRYT--KQEKVVGLCNVP-IGMRMGVAKLLGVDADRVHIDFAGLNHMVFGLHVYLDGV-EVTEKVIDLVAHPDRSG  234 (450)
T ss_dssp             ---HHHHC--CCCCEEECCSHH-HHHHHHHHHHHTSCGGGEEEEEEEETTEEEEEEEEETTE-ECHHHHHHHHSCC----
T ss_pred             ---HHHhC--CCCCEEEeCCcH-HHHHHHHHHHhCCCHHHcEEEEEeeecceeEEEeeeCCc-CchHhHHHHHhhhcccc
Confidence               47775  777999998765 599999999999999999999999           9998 899999873211     


Q ss_pred             --------CCC---------------------CHHHH-------------HHHHhhhccchhhhh-----hhhc----cC
Q 017551          212 --------CSF---------------------TQEET-------------EYLTNRIQNGGTEVV-----EAKA----GA  240 (369)
Q Consensus       212 --------~~~---------------------~~~~~-------------~~l~~~v~~~~~ev~-----~~k~----g~  240 (369)
                              .++                     +++.+             .++.+++++++++++     +.|.    ++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~g~~p~~y~~yy~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ei~~~~~~~~k~~~~~~~  314 (450)
T 1s6y_A          235 VTMKNIVDLGWEPDFLKGLKVLPCPYHRYYFQTDKMLAEELEAAKTKGTRAEVVQQLEKELFELYKDPNLAIKPPQLEKR  314 (450)
T ss_dssp             --------CCCCHHHHHHHCSBCCGGGHHHHSHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTTTCC-----------C
T ss_pred             ccccccccCccHHHHHHhcCCccchhhhhhcCCHHHHHhhhccccccchHHHHHHHHHHHHHHHHhhhccccccchhhcc
Confidence                    011                     12222             234556777788888     4331    13


Q ss_pred             CchhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC---CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHH
Q 017551          241 GSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLH  316 (369)
Q Consensus       241 g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~  316 (369)
                      |++  ++|.+++++++||++|.+   .+++++ +++|.|   |+|+++|+||+||++|++++.. ++|+++|++++++..
T Consensus       315 ~~~--~~~~~a~~ii~AI~~d~~---~~~~vsv~n~G~i~~lp~d~~vevP~vvg~~Gi~~i~~-~~L~~~e~~l~~~~~  388 (450)
T 1s6y_A          315 GGA--YYSDAACSLISSIYNDKR---DIQPVNTRNNGAIASISAESAVEVNCVITKDGPKPIAV-GDLPVAVRGLVQQIK  388 (450)
T ss_dssp             CSC--CHHHHHHHHHHHHHHTCC---CEEEEEEECTTSBTTSCTTSEEEEEEEEETTEEEECCC-BCCCHHHHHHHHHHH
T ss_pred             cch--HHHHHHHHHHHHHHcCCC---eEEEEEeecCceecCCCCCeEEEEeEEEcCCCeEEeec-CCCCHHHHHHHHHHH
Confidence            333  456899999999999876   377776 789987   5899999999999999999998 499999999999877


Q ss_pred             HHHHHHHH
Q 017551          317 LCFQDWLG  324 (369)
Q Consensus       317 ~~i~~~l~  324 (369)
                      ..=+-.++
T Consensus       389 ~~e~l~ve  396 (450)
T 1s6y_A          389 SFERVAAE  396 (450)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            54443333

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=100.00  E-value=4.2e-41  Score=324.78  Aligned_cols=293  Identities=20%  Similarity=0.329  Sum_probs=246.6

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC-CCeEEEEeCCCChhhhcCCCcEEEE
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVII   94 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~-~~~v~~~~~t~dl~~al~~ADiVii   94 (369)
                      +++|||+|||| |.+|++++..|+..++.++|+|+|+++  ..+.++|+.|... ....+... ++++ +++++||+||+
T Consensus         5 ~~~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~-~~~~~aD~Vii   81 (319)
T 1lld_A            5 VKPTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDG-SDDP-EICRDADMVVI   81 (319)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEE-ESCG-GGGTTCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEe-CCCH-HHhCCCCEEEE
Confidence            34589999999 999999999999998888999999987  4455677766441 11223222 2354 68999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHH
Q 017551           95 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA  173 (369)
Q Consensus        95 ~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~  173 (369)
                      +++.|++||++|.+++.+|+++++++++++.+++|++++++++||++.+++++    ++.+++|++||+|. |.+|+.|+
T Consensus        82 ~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~~~~~~~~----~~~~~~~~~~vig~~~~l~~~r~  157 (319)
T 1lld_A           82 TAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVDIATHVA----QKLTGLPENQIFGSGTNLDSARL  157 (319)
T ss_dssp             CCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHH----HHHHTCCTTSEEECTTHHHHHHH
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCchHHHHHHH----HHhcCCCHHHEeeccccHhHHHH
Confidence            99999999999999999999999999999999999999999999999988654    56678999999999 99999999


Q ss_pred             HHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCC-----------C--CCHHHHHHHHhhhccchhhhhhhhccC
Q 017551          174 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-----------S--FTQEETEYLTNRIQNGGTEVVEAKAGA  240 (369)
Q Consensus       174 ~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~-----------~--~~~~~~~~l~~~v~~~~~ev~~~k~g~  240 (369)
                      +..+++++++++.+++.+++|+|++ +++|+|++..+..           .  .+++.++++.+++++++.+|++.   +
T Consensus       158 ~~~~a~~~~v~~~~v~~~~~G~~g~-~~~~~w~k~~in~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~e~~~v~~~---~  233 (319)
T 1lld_A          158 RFLIAQQTGVNVKNVHAYIAGEHGD-SEVPLWESATIGGVPMSDWTPLPGHDPLDADKREEIHQEVKNAAYKIING---K  233 (319)
T ss_dssp             HHHHHHHHTCCGGGEECCEEBSSST-TCEECTTSCEETTEEGGGCCCCTTCCCCCHHHHHHHHHHHHHHHHHHHTS---C
T ss_pred             HHHHHHHhCCCHHHeEEEEEeCCCC-ceeeeeecceECCccHHHHHhccccccCCHHHHHHHHHHHHHhhHhhhhC---C
Confidence            9999999999999999999999998 8899999976531           1  23344788888999999999985   4


Q ss_pred             CchhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHH
Q 017551          241 GSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLC  318 (369)
Q Consensus       241 g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~  318 (369)
                      |++.+++|.+.++++++|++|.+.   .++++ +++|.| ..+.++++||.++++|+++++.+ +|+++|+++|++++..
T Consensus       234 G~~~~~~a~~~~sm~~di~~~~~~---ei~~s~~~~G~~~~~~~~~gvp~~~~~~Gv~~i~~~-~l~~~e~~~l~~s~~~  309 (319)
T 1lld_A          234 GATNYAIGMSGVDIIEAVLHDTNR---ILPVSSMLKDFHGISDICMSVPTLLNRQGVNNTINT-PVSDKELAALKRSAET  309 (319)
T ss_dssp             CSCCHHHHHHHHHHHHHHHTTCCE---EEEEEEECSSBTTBCSSEEEEEEEEETTEEECCSCC-CCCHHHHHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHcCCCc---EEEEEEEecCcCCccceEEEEEEEEeCCeeEEEcCC-CCCHHHHHHHHHHHHH
Confidence            788899999999999999998653   55564 889998 67999999999999999999995 9999999999999965


Q ss_pred             HHHHHHh
Q 017551          319 FQDWLGE  325 (369)
Q Consensus       319 i~~~l~~  325 (369)
                      ++..+++
T Consensus       310 l~~~~~~  316 (319)
T 1lld_A          310 LKETAAQ  316 (319)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHHH
Confidence            5555543

>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2

Probab=100.00  E-value=1.5e-41  Score=344.49  Aligned_cols=284  Identities=17%  Similarity=0.211  Sum_probs=215.9

Q ss_pred             CCEEEEEcCCCcc-HHHHHHHHHhC--CC-CcEEEEEeCCC--chhHHHHhhccc-----CCCeEEEEeCCCChhhhcCC
Q 017551           20 GFKVAILGAAGGI-GQPLAMLMKIN--PL-VSVLHLYDVVN--TPGVTADISHMD-----TGAVVRGFLGQPQLENALTG   88 (369)
Q Consensus        20 ~~KI~IiGA~G~v-Gs~la~~l~~~--~~-~~el~L~D~~~--~~g~~~dL~~~~-----~~~~v~~~~~t~dl~~al~~   88 (369)
                      .+||+|||| |++ |..++..|+.+  ++ ..||+|||+++  +.+ ..|+.+..     ...+++.   ++|+++|++|
T Consensus        28 ~~KIaVIGa-Gsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~-~~~~~~~~l~~~~~~~~I~~---t~D~~eal~~  102 (472)
T 1u8x_X           28 SFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDR-IAGACDVFIREKAPDIEFAA---TTDPEEAFTD  102 (472)
T ss_dssp             CEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHH-HHHHHHHHHHHHCTTSEEEE---ESCHHHHHSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHH-HHHHHHHHhccCCCCCEEEE---ECCHHHHHcC
Confidence            459999999 887 55677777776  66 78999999998  333 34554422     2345554   4688899999


Q ss_pred             CcEEEEcCCCCCCCCCCHHHH--------------------HHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHH
Q 017551           89 MDLVIIPAGVPRKPGMTRDDL--------------------FNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAA  148 (369)
Q Consensus        89 ADiVii~ag~p~k~g~~r~~~--------------------~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~a  148 (369)
                      ||+||+++|.++++|++|+++                    +.+|++++++++++|+++||+||+|++|||+|++|++  
T Consensus       103 AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~T~~--  180 (472)
T 1u8x_X          103 VDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPAAIVAEA--  180 (472)
T ss_dssp             CSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCHHHHHHH--
T ss_pred             CCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHH--
Confidence            999999999998888887444                    8999999999999999999999999999999998754  


Q ss_pred             HHHHHhCCCCCCcEEEechhcHHHHHHHHHHHhCCCC-CCCceeEEe-----------e-cCCCccccccccCCC-----
Q 017551          149 EVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDP-RDVDVPVVG-----------G-HAGVTILPLLSQVKP-----  210 (369)
Q Consensus       149 e~~~~~~~~~~~kviG~t~Ld~~R~~~~la~~lgv~~-~~V~~~viG-----------~-hg~~~~vp~~S~~~~-----  210 (369)
                        +++.+  |++||||+|++. .|+++++|+.||++| ++|+++++|           + ||+ +++|.||...+     
T Consensus       181 --~~k~~--p~~rViG~c~~~-~r~~~~la~~lgv~~~~~v~~~v~GlNH~~W~~~~~~~hG~-d~~p~~~~~~~~~g~~  254 (472)
T 1u8x_X          181 --TRRLR--PNSKILNICDMP-VGIEDRMAQILGLSSRKEMKVRYYGLNHFGWWTSIQDQEGN-DLMPKLKEHVSQYGYI  254 (472)
T ss_dssp             --HHHHS--TTCCEEECCSHH-HHHHHHHHHHHTCSCGGGEEEEEEEETTEEEEEEEEETTCC-BCHHHHHHHHHHHSSC
T ss_pred             --HHHhC--CCCCEEEeCCcH-HHHHHHHHHHhCcCchhceeEEEeccchhhheeeeEeCCCC-EehHhHHHHHHhcCCC
Confidence              47775  788999998765 499999999999998 999999999           8 998 89999987321     


Q ss_pred             C--------CCCCHHH--------------------H----HHHHhh----------h----ccchhhhhhhhccCC---
Q 017551          211 P--------CSFTQEE--------------------T----EYLTNR----------I----QNGGTEVVEAKAGAG---  241 (369)
Q Consensus       211 ~--------~~~~~~~--------------------~----~~l~~~----------v----~~~~~ev~~~k~g~g---  241 (369)
                      +        ..+..+-                    |    +++.++          +    .+..+++++...++|   
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~Yl~yy~~~~~~~e~~~~~~~r~~~v~~~~~~~~~~~~~~~~~~~~~~  334 (472)
T 1u8x_X          255 PKTEAEAVEASWNDTFAKARDVQAADPDTLPNTYLQYYLFPDDMVKKSNPNHTRANEVMEGREAFIFSQCDMITREQSSE  334 (472)
T ss_dssp             CCC-------CTTSHHHHHHHHHHTSTTSEECGGGHHHHSHHHHHTTSCSSSCHHHHHHHHTTTTTTTTHHHHHHHTSCC
T ss_pred             ccccccccccchHHHHHhhcCccccccccCCccchhcccCCHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhcCCcc
Confidence            1        0111000                    1    122222          1    112223222110033   


Q ss_pred             chhh---HHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC---CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHH
Q 017551          242 SATL---SMAYAAVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCL  314 (369)
Q Consensus       242 ~~~~---s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~  314 (369)
                      ++.+   ++|.+++++++||++|.+   .+++++ +++|.|   |+|+++|+||+||++|++++.. ++|+++|++++++
T Consensus       335 ~~~~~~~~~~~~a~~ii~AI~~d~~---~v~~vsv~n~G~i~glp~d~~veVP~vvg~~Gi~pi~~-~~Lp~~~~~l~~~  410 (472)
T 1u8x_X          335 NSEIKIDDHASYIVDLARAIAYNTG---ERMLLIVENNGAIANFDPTAMVEVPCIVGSNGPEPITV-GTIPQFQKGLMEQ  410 (472)
T ss_dssp             SCSSCCCTTTHHHHHHHHHHHHTCC---EEEEEEEECTTSBTTSCTTSEEEEEEEEETTEEEECCC-BCCCHHHHHHHHH
T ss_pred             cccccccHHHHHHHHHHHHHhcCCC---eEEEEEeecCceecCcCCCeEEEEeEEEcCCCceEeec-CCCCHHHHHHHHH
Confidence            3444   889999999999999876   477776 789987   5899999999999999999998 4999999999986


Q ss_pred             HHHHHH
Q 017551          315 LHLCFQ  320 (369)
Q Consensus       315 ~~~~i~  320 (369)
                      ....=+
T Consensus       411 ~~~~e~  416 (472)
T 1u8x_X          411 QVSVEK  416 (472)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            664333

>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}

Probab=100.00  E-value=5.1e-33  Score=280.00  Aligned_cols=275  Identities=20%  Similarity=0.227  Sum_probs=193.3

Q ss_pred             CCCEEEEEcCCCccH--HHHHHHHHhCC-CCcEEEEEeCCCc--h--hHHHHhhcccCCCeEEEEeCCCChhhhcCCCcE
Q 017551           19 AGFKVAILGAAGGIG--QPLAMLMKINP-LVSVLHLYDVVNT--P--GVTADISHMDTGAVVRGFLGQPQLENALTGMDL   91 (369)
Q Consensus        19 ~~~KI~IiGA~G~vG--s~la~~l~~~~-~~~el~L~D~~~~--~--g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADi   91 (369)
                      +.+||+|||| |++|  ..++..++... +..+|+|+|+++.  .  ....+....   ...++. .|+|+++|++||||
T Consensus         4 ~~~KIaVIGa-Gs~g~g~~la~~l~~~~~~~geV~L~Di~~e~le~~~~~~~~l~~---~~~~I~-~TtD~~eAl~dADf   78 (450)
T 3fef_A            4 DQIKIAYIGG-GSQGWARSLMSDLSIDERMSGTVALYDLDFEAAQKNEVIGNHSGN---GRWRYE-AVSTLKKALSAADI   78 (450)
T ss_dssp             CCEEEEEETT-TCSSHHHHHHHHHHHCSSCCEEEEEECSSHHHHHHHHHHHTTSTT---SCEEEE-EESSHHHHHTTCSE
T ss_pred             CCCEEEEECC-ChhHhHHHHHHHHHhccccCCeEEEEeCCHHHHHHHHHHHHHHhc---cCCeEE-EECCHHHHhcCCCE
Confidence            4579999999 9984  57777777644 3459999999971  1  122222111   233332 36799999999999


Q ss_pred             EEEcCC------------CCCCCCCCHH----------HHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHH
Q 017551           92 VIIPAG------------VPRKPGMTRD----------DLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE  149 (369)
Q Consensus        92 Vii~ag------------~p~k~g~~r~----------~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae  149 (369)
                      ||+++.            +|+|+|+.|.          ....+|+++++++++.|+++||+||+|++|||+|++|+++  
T Consensus        79 VI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tNPvdi~t~~~--  156 (450)
T 3fef_A           79 VIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTNPMSVCTRVL--  156 (450)
T ss_dssp             EEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHH--
T ss_pred             EEeccccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCCCeEEEEecCchHHHHHHH--
Confidence            999974            5999998554          5567999999999999999999999999999999998654  


Q ss_pred             HHHHhCCCCCCcEEEechhcHHHHHHHHHHHh----C---CCCCCCceeEEe-ecCC---------Ccccccc-------
Q 017551          150 VFKKAGTYDPKKLLGVTMLDVVRANTFVAEVL----G---LDPRDVDVPVVG-GHAG---------VTILPLL-------  205 (369)
Q Consensus       150 ~~~~~~~~~~~kviG~t~Ld~~R~~~~la~~l----g---v~~~~V~~~viG-~hg~---------~~~vp~~-------  205 (369)
                        ++.  +|+.||||+|+.. .++++.+|+.|    |   +++++|+..+.| ||..         .+.+|.+       
T Consensus       157 --~k~--~p~~rviG~C~~~-~~~~~~~a~~l~~~lg~~~~~~~~v~~~~~GlNH~~w~~~~~~~G~d~~p~l~~~~~~~  231 (450)
T 3fef_A          157 --YKV--FPGIKAIGCCHEV-FGTQKLLAEMVTERLGIEVPRREDIRVNVLGINHFTWITKASYRHIDLLPIFREFSAHY  231 (450)
T ss_dssp             --HHH--CTTCEEEECCSHH-HHHHHHHHHHHHHHHCCCCSCGGGEEEEEEEETTEEEEEEEEETTEEHHHHHHHHHHHH
T ss_pred             --HHH--CCCCCEEEeCCcH-HHHHHHHHHHHHhhcCCCCCChhHeEEEEeeecCeEeEEEEEECCEEChHHHHHHHHhh
Confidence              665  7889999999876 68999999999    5   779999999999 7754         1233311       


Q ss_pred             ------------ccC-----------------------------CCCCCC--CHH---------HH-----HHHHhhhcc
Q 017551          206 ------------SQV-----------------------------KPPCSF--TQE---------ET-----EYLTNRIQN  228 (369)
Q Consensus       206 ------------S~~-----------------------------~~~~~~--~~~---------~~-----~~l~~~v~~  228 (369)
                                  ...                             +.+..+  +++         .|     .+..+++  
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~h~~ey~p~~Y~~~~~~~~~~~~~~~~r~~~~~~~~~~~--  309 (450)
T 3fef_A          232 GESGYELEGECWRDSVFCSAHRVAFDLFETYGAIPAAGDRHLAEFLPGPYLKQPEVWKFHLTPISFRKQDRAEKRQET--  309 (450)
T ss_dssp             TTTCCCCTTCCTTSCTTCCCSHHHHHHHHHHSSEECSCHHHHTTSSCSSGGGCTTTTTCCCCCHHHHHHHHHHHHHHH--
T ss_pred             cccccccccccccccccchhhHHHHHHHHHcCCcccccccchhcccchhhcCCHHHhcccccchhhHHHHHHHHHHHH--
Confidence                        000                             000000  000         00     0000000  


Q ss_pred             chhhhhhhh---ccCCchhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC---CCccEEEEEEEEcCCCeEEEccC
Q 017551          229 GGTEVVEAK---AGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQL  301 (369)
Q Consensus       229 ~~~ev~~~k---~g~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~svPv~lg~~Gv~~~~~~  301 (369)
                        .+..+..   .-+++     +.+++++++||++|.+   .+++++ +++|.|   ++|+++|+||+||++|++++.. 
T Consensus       310 --~~~~~~~~~~~~~~~-----~e~~~~ii~aI~~d~~---~~~~vnv~n~G~i~~lp~d~~vevP~~v~~~Gi~pi~~-  378 (450)
T 3fef_A          310 --ERLIVQQRGVAEKAS-----GEEGVNIIAALLGLGE---LVTNVNMPNQGQVLNLPIQAIVETNAFITRNRVQPILS-  378 (450)
T ss_dssp             --HHHHHTTCCCCCSCC-----SCCHHHHHHHHTTSCC---EEEEEEEECSSSSTTSCTTSEEEEEEEEETTEEEEBCC-
T ss_pred             --HHHhcCCcCcCcCcc-----HHHHHHHHHHHHcCCC---eEEEEEeecCcEecCCCCCeEEEEEEEEcCCCceeccc-
Confidence              0000000   00111     3567899999999876   377775 789987   6899999999999999999887 


Q ss_pred             CCCCHHHHHHHHHHHHH
Q 017551          302 GPLNEYESGLFCLLHLC  318 (369)
Q Consensus       302 ~~L~~~E~~~L~~~~~~  318 (369)
                      ++|+++++++++.....
T Consensus       379 g~Lp~~~~~l~~~~~~~  395 (450)
T 3fef_A          379 GALPKGVEMLAARHISN  395 (450)
T ss_dssp             CCCCHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHH
Confidence            69999999999865543

>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2

Probab=99.98  E-value=9e-32  Score=272.88  Aligned_cols=286  Identities=19%  Similarity=0.145  Sum_probs=194.0

Q ss_pred             CCEEEEEcCCCccHHH--HHHHHHhC-CC-CcEEEEEeCCC--chhHHHHhhcc-----cCCCeEEEEeCCCChhhhcCC
Q 017551           20 GFKVAILGAAGGIGQP--LAMLMKIN-PL-VSVLHLYDVVN--TPGVTADISHM-----DTGAVVRGFLGQPQLENALTG   88 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~--la~~l~~~-~~-~~el~L~D~~~--~~g~~~dL~~~-----~~~~~v~~~~~t~dl~~al~~   88 (369)
                      .+||+|||| |+||.+  ++..|++. ++ ..+|+|+|+++  +.+ +.++.+.     ....+++.   ++|+++|++|
T Consensus         3 ~~KIaVIGA-GsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~-~~~~~~~~l~~~~~~~~I~~---ttD~~eal~d   77 (480)
T 1obb_A            3 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDA-ILTIAKKYVEEVGADLKFEK---TMNLDDVIID   77 (480)
T ss_dssp             CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHH-HHHHHHHHHHHTTCCCEEEE---ESCHHHHHTT
T ss_pred             CCEEEEECC-CchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHH-HHHHHHHHhccCCCCcEEEE---ECCHHHHhCC
Confidence            579999999 998544  46677643 34 67999999998  233 2333221     12345554   4688899999


Q ss_pred             CcEEEEcCCC------------CCCCCCCH--HH------------HHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCC
Q 017551           89 MDLVIIPAGV------------PRKPGMTR--DD------------LFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS  142 (369)
Q Consensus        89 ADiVii~ag~------------p~k~g~~r--~~------------~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~  142 (369)
                      ||+||+++|.            |+|+|+.|  .+            ++.+|++++++++++|+++||+||+|++|||+++
T Consensus        78 AD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi  157 (480)
T 1obb_A           78 ADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPIFE  157 (480)
T ss_dssp             CSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECSSCHHH
T ss_pred             CCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHH
Confidence            9999999986            66777655  44            4889999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHhCCCCCCcEEEechhcHHHHHHHHHHHhCCCCCCCceeEEe-ecCC---------Ccccc---------
Q 017551          143 TVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG-GHAG---------VTILP---------  203 (369)
Q Consensus       143 ~t~i~ae~~~~~~~~~~~kviG~t~Ld~~R~~~~la~~lgv~~~~V~~~viG-~hg~---------~~~vp---------  203 (369)
                      +|+++    ++   +|++||||+|+++. ++++++ +.+|++|++|+++|+| ||..         ++.+|         
T Consensus       158 ~t~~~----~k---~p~~rviG~c~~~~-~~~~~l-~~lgv~~~~v~~~v~GlNH~~w~~~~~~~G~D~~p~l~~~~~~~  228 (480)
T 1obb_A          158 GTTLV----TR---TVPIKAVGFCHGHY-GVMEIV-EKLGLEEEKVDWQVAGVNHGIWLNRFRYNGGNAYPLLDKWIEEK  228 (480)
T ss_dssp             HHHHH----HH---HSCSEEEEECSGGG-HHHHHH-HHTTCCGGGEEEEEEEETTEEEEEEEEETTEECHHHHHHHHHHT
T ss_pred             HHHHH----HH---CCCCcEEecCCCHH-HHHHHH-HHhCCCHHHceEEEEeecchhhhhheeeCCeEcHHHHHHHHHcc
Confidence            88654    66   68899999987554 479999 9999999999999999 5443         11111         


Q ss_pred             --------cccc--CC-----------CCC-------CCC------H------------------HH----HHHHHhhhc
Q 017551          204 --------LLSQ--VK-----------PPC-------SFT------Q------------------EE----TEYLTNRIQ  227 (369)
Q Consensus       204 --------~~S~--~~-----------~~~-------~~~------~------------------~~----~~~l~~~v~  227 (369)
                              .|+.  ..           .|.       .+.      .                  .+    ..+..+.+.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~h~~~y~~~~~~~~~~yyy~~~~~~~~~~~~~~~~~~~~~e~~~~~e  308 (480)
T 1obb_A          229 SKDWKPENPFNDQLSPAAIDMYRFYGVMPIGDTVRNSSWRYHRDLETKKKWYGEPWGGADSEIGWKWYQDTLGKVTEITK  308 (480)
T ss_dssp             GGGCCCSSTTCCTTSHHHHHHHHHHSSCEEGGGTTSCCGGGGSSHHHHHHHHCTTTTSTTSHHHHHHHHHHHHHHHHHHH
T ss_pred             CccccccccccchhhhHHHHHHHhcCCeecCCCCCCcCcccccccCccccccchhhcccccccccHhHHHHHHHHHHHHH
Confidence                    1322  00           111       111      1                  01    111111111


Q ss_pred             cchhhhhhhhccCC--------chhh----------------HHHHHHHHHHHHHHhccCCCCceeEE-EeecCCC---C
Q 017551          228 NGGTEVVEAKAGAG--------SATL----------------SMAYAAVKFADACLRGLRGDAGVVEC-AFVASQV---T  279 (369)
Q Consensus       228 ~~~~ev~~~k~g~g--------~~~~----------------s~A~a~~~li~ai~~~~~~~~~v~~~-~~~~g~~---~  279 (369)
                      +..+++.+...-+.        .+.|                ..+.+++++++||++|++.   ++.+ +.++|.+   |
T Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ge~a~~ii~ai~~~~~~---~~~vnv~N~G~I~~lp  385 (480)
T 1obb_A          309 KVAKFIKENPSVRLSDLGSVLGKDLSEKQFVLEVEKILDPERKSGEQHIPFIDALLNDNKA---RFVVNIPNKGIIHGID  385 (480)
T ss_dssp             HHHHHHHHCTTCCGGGCSSSSCCSHHHHHHHHHHHHHHCTTCCCSCSHHHHHHHHHHCCCE---EEEEEEECTTSSTTSC
T ss_pred             HHHHHHhcCCccccccccccccccccccccccccccccccchhhhHHHHHHHHHHHhCCCe---EEEEEeeCCceeCCCC
Confidence            12222222111011        0111                1125678999999998763   4445 4688976   8


Q ss_pred             CccEEEEEEEEcCCCeEEEccCCC-CCHHHHHH-HHHHHHHHHHHH
Q 017551          280 ELPFFASKVRLGRQGAEEIFQLGP-LNEYESGL-FCLLHLCFQDWL  323 (369)
Q Consensus       280 ~~~~~svPv~lg~~Gv~~~~~~~~-L~~~E~~~-L~~~~~~i~~~l  323 (369)
                      +|+++++||+|+++|+.++.. ++ |+++.+++ ++.....-+-.+
T Consensus       386 ~d~vVEvp~~v~~~G~~p~~~-g~~lP~~~~~l~~~~~~~~e~l~v  430 (480)
T 1obb_A          386 DDVVVEVPALVDKNGIHPEKI-EPPLPDRVVKYYLRPRIMRMEMAL  430 (480)
T ss_dssp             TTSEEEEEEEEETTEEEECCC-SSCCCHHHHHHTHHHHHHHHHHHH
T ss_pred             CCeEEEEEEEEcCCCCEeecc-CCCCCHHHHhHHHHHHHHHHHHHH
Confidence            899999999999999999876 68 99999999 775554333333

>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*

Probab=99.97  E-value=3e-31  Score=269.75  Aligned_cols=275  Identities=20%  Similarity=0.188  Sum_probs=183.5

Q ss_pred             CEEEEEcCCCccHHHHHH--HHHhCC----CCcEEEEEeCCC--chhHHHHhhccc--CCCeEEEEeCCCChhhhcCCCc
Q 017551           21 FKVAILGAAGGIGQPLAM--LMKINP----LVSVLHLYDVVN--TPGVTADISHMD--TGAVVRGFLGQPQLENALTGMD   90 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~--~l~~~~----~~~el~L~D~~~--~~g~~~dL~~~~--~~~~v~~~~~t~dl~~al~~AD   90 (369)
                      |||+|||| |++|.+..+  .++..+    ..++|+|+|+++  +.+...++.+..  ....+++.. |+|+++|++|||
T Consensus         1 mKI~iIGa-Gs~~~t~~l~~~~~~~~~l~~~~~ei~L~Di~~~rl~~~~~~~~~~~~~~~~~~~i~~-t~d~~eAl~gAD   78 (477)
T 3u95_A            1 MKISIVGA-GSVRFALQLVEDIAQTDELSREDTHIYLMDVHERRLNASYILARKYVEELNSPVKVVK-TESLDEAIEGAD   78 (477)
T ss_dssp             CEEEEETT-TSHHHHHHHHHHHHTCTTTCSTTCEEEEECSCHHHHHHHHHHHHHHHHHHTCCCEEEE-ESCHHHHHTTCS
T ss_pred             CEEEEECC-CchhhHHHHHHHHHhhHhcCCCCCEEEEECCCHHHHHHHHHHHHHHHHHcCCCeEEEE-eCCHHHHhCCCC
Confidence            69999999 999877543  355443    357999999998  456666666543  123344332 679999999999


Q ss_pred             EEEEcCCC-------------------CCCCCCCHHHHH---------------HHHHHHHHHHHHHHhhhCCCeEEEEe
Q 017551           91 LVIIPAGV-------------------PRKPGMTRDDLF---------------NINAGIVRTLCEGIAKCCPNATVNLI  136 (369)
Q Consensus        91 iVii~ag~-------------------p~k~g~~r~~~~---------------~~N~~i~~~i~~~i~~~~p~a~viv~  136 (369)
                      |||+++|.                   |+|+|++|..+.               .+|++++.+++++|+++||+||+|++
T Consensus        79 ~Vi~~~g~~~~Rvg~~~~r~~de~~~ip~k~G~~~~~l~qet~g~gG~~~~lR~~~~i~v~~~i~~~i~~~~P~A~~in~  158 (477)
T 3u95_A           79 FIINTAYPYDPRYHDSGSQRWDEVTKVGEKHGYYRGIDSQELNMVSTYTYVLSSYPDVKLALEIAEKMKKMAPKAYLMQT  158 (477)
T ss_dssp             EEEECCCCCCTTTCSSHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTSCSTTTTHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             EEEECcccccccccccccccceeeeccCcccceeecccccccCCccchhHHHhhhhhHHHHHHHHHHHHhhCCCeEEEEe
Confidence            99999874                   558887765542               36899999999999999999999999


Q ss_pred             cCCCCChhHHHHHHHHHhCCCCCCcEEEechhcHHHHHHHHHHHhCCCCCCCceeEEeecCC----------Cccccccc
Q 017551          137 SNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAG----------VTILPLLS  206 (369)
Q Consensus       137 tNPv~~~t~i~ae~~~~~~~~~~~kviG~t~Ld~~R~~~~la~~lgv~~~~V~~~viG~hg~----------~~~vp~~S  206 (369)
                      |||++++|+.+    +++++   .|++|+|+-...  ...+++.||+++++|+..+.|-|+.          .+.+|.+.
T Consensus       159 tNP~~i~t~a~----~~~~~---~k~vGlC~~~~~--~~~~~~~Lg~~~~~v~~~~~GlNH~~w~~~~~~~G~D~~P~l~  229 (477)
T 3u95_A          159 ANPVFEITQAV----RRWTG---ANIIGFCHGVAG--VYEVFERLGLDPEEVDWQVAGVNHGIWLNRFRYRGKDAYPLLD  229 (477)
T ss_dssp             SSCHHHHHHHH----HHHHC---CCEEEECCGGGH--HHHHHHHTTCCGGGEEEEEEEETTEEEEEEEEETTEECHHHHH
T ss_pred             cChHHHHHHHH----HHhCC---CCeEEECCCHHH--HHHHHHHhCCCHHHcEEEEeecCCCeeeeeeeecCCcccHHHH
Confidence            99999998644    66655   599999975443  4557788999999999999994433          12333211


Q ss_pred             c-----------CCC-------------------C------C-----CCCHHH-----------------------HHHH
Q 017551          207 Q-----------VKP-------------------P------C-----SFTQEE-----------------------TEYL  222 (369)
Q Consensus       207 ~-----------~~~-------------------~------~-----~~~~~~-----------------------~~~l  222 (369)
                      .           ..+                   +      +     .+..+.                       +...
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~r~~g~~p~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~  309 (477)
T 3u95_A          230 EWIEKELSKWEPKNPWDTQMSPAAMDMYRFYGMLPIGDTVRNGTWKYHYNLETKKKWFRRFGGIDNEVERPKFHEHLRRA  309 (477)
T ss_dssp             HHHHHHTTTCCCSSTTCCTTSHHHHHHHHHHSSCEEGGGGTSCCGGGTSSHHHHHHHHCTTCCSSSTTHHHHHHHHHHHH
T ss_pred             HHHHhhcccccccCccccccchHHHHHHHHhCCcccccccccccchhhhhHHHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence            0           000                   0      0     000000                       0011


Q ss_pred             Hhhhccchhhhhhhh-------c---cCCchhhHHHHHHHHHHHHHHhccCCCCceeEE-EeecCCC---CCccEEEEEE
Q 017551          223 TNRIQNGGTEVVEAK-------A---GAGSATLSMAYAAVKFADACLRGLRGDAGVVEC-AFVASQV---TELPFFASKV  288 (369)
Q Consensus       223 ~~~v~~~~~ev~~~k-------~---g~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~-~~~~g~~---~~~~~~svPv  288 (369)
                      .+++.+...++.+..       .   ..++..++  .+++++++||++|++.   ++.+ +.++|.+   |+|.+++|||
T Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--e~a~~ii~AI~~~~~~---~~~vNv~N~G~I~nLP~DavVEVpc  384 (477)
T 3u95_A          310 RERLIKLAEEVQENPHLKITEKHPEIFPKGRLSG--EQHIPFINAIANNKRV---RLFLNVENQGALKDFPDDLVMELPV  384 (477)
T ss_dssp             HHHHHHHHHHHHHCTTCCHHHHCTTTSCSSCCCC--CSHHHHHHHHHHCCCE---EEEEEEECTTSSTTSCTTSEEEEEE
T ss_pred             HHHHHHHHHHHhhccchhcccccchhcccccccH--HHHHHHHHHHhCCCCe---EEEEEeecCcccCCCCCCcEEEEEE
Confidence            111111111111100       0   01111222  5678999999999763   4545 4789987   7899999999


Q ss_pred             EEcCCCeEEEccCCCCCHHHHHHH
Q 017551          289 RLGRQGAEEIFQLGPLNEYESGLF  312 (369)
Q Consensus       289 ~lg~~Gv~~~~~~~~L~~~E~~~L  312 (369)
                      +|+++|+.+..- ++++....+++
T Consensus       385 ~Vd~~Gi~P~~v-g~~p~~~~~l~  407 (477)
T 3u95_A          385 WVDSSGIHREKV-EPDLTHRIKIF  407 (477)
T ss_dssp             EEETTEEEECCC-CSCCCHHHHHH
T ss_pred             EEcCCCcccccC-CCCCHHHHHHH
Confidence            999999998654 57877776664

>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*

Probab=98.84  E-value=5.5e-09  Score=100.68  Aligned_cols=119  Identities=16%  Similarity=0.159  Sum_probs=86.5

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-c--hhH--H-H---Hhhccc--C--------CCeEEEEeCCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-T--PGV--T-A---DISHMD--T--------GAVVRGFLGQPQ   81 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-~--~g~--~-~---dL~~~~--~--------~~~v~~~~~t~d   81 (369)
                      .||+|||| |.+|+.+|..++..|+  +|+|+|+++ .  .+.  + .   .+....  .        ..+++.   ++|
T Consensus         7 ~~VaViGa-G~MG~giA~~~a~~G~--~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~---~~~   80 (319)
T 3ado_A            7 GDVLIVGS-GLVGRSWAMLFASGGF--RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS---CTN   80 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC--CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE---ECC
T ss_pred             CeEEEECC-cHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhccc---ccc
Confidence            59999999 9999999999999999  999999987 1  111  1 1   111110  0        123443   468


Q ss_pred             hhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCChhHHHHHHHHHhCCCCCC
Q 017551           82 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPK  160 (369)
Q Consensus        82 l~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~  160 (369)
                      +.+++++||+||.++              .+|+++.+++..++++++| ++  |++||-..+...-++    ... -.|+
T Consensus        81 l~~a~~~ad~ViEav--------------~E~l~iK~~lf~~l~~~~~~~a--IlaSNTSsl~is~ia----~~~-~~p~  139 (319)
T 3ado_A           81 LAEAVEGVVHIQECV--------------PENLDLKRKIFAQLDSIVDDRV--VLSSSSSCLLPSKLF----TGL-AHVK  139 (319)
T ss_dssp             HHHHTTTEEEEEECC--------------CSCHHHHHHHHHHHHTTCCSSS--EEEECCSSCCHHHHH----TTC-TTGG
T ss_pred             hHhHhccCcEEeecc--------------ccHHHHHHHHHHHHHHHhhhcc--eeehhhhhccchhhh----hhc-cCCC
Confidence            889999999999995              6689999999999999995 55  459999887543222    222 2368


Q ss_pred             cEEEec
Q 017551          161 KLLGVT  166 (369)
Q Consensus       161 kviG~t  166 (369)
                      |++|+.
T Consensus       140 r~ig~H  145 (319)
T 3ado_A          140 QCIVAH  145 (319)
T ss_dssp             GEEEEE
T ss_pred             cEEEec
Confidence            899875

>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*

Probab=98.47  E-value=6e-07  Score=95.51  Aligned_cols=119  Identities=16%  Similarity=0.210  Sum_probs=85.0

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-c--hhH--HH-Hhh---------ccc-CCCeEEEEeCCCChh
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-T--PGV--TA-DIS---------HMD-TGAVVRGFLGQPQLE   83 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-~--~g~--~~-dL~---------~~~-~~~~v~~~~~t~dl~   83 (369)
                      -.||+|||| |.+|+.+|..++..|+  +|+|+|+++ .  .+.  .. -+.         ... ....++.   ++++ 
T Consensus       316 i~~v~ViGa-G~MG~gIA~~~a~aG~--~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~-  388 (742)
T 3zwc_A          316 VSSVGVLGL-GTMGRGIAISFARVGI--SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF---SSST-  388 (742)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTC--EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEE---ESCG-
T ss_pred             ccEEEEEcc-cHHHHHHHHHHHhCCC--chhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcc---cCcH-
Confidence            369999999 9999999999999999  999999987 1  111  11 010         001 1234443   3454 


Q ss_pred             hhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCChhHHHHHHHHHhCCCCCCcE
Q 017551           84 NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPKKL  162 (369)
Q Consensus        84 ~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kv  162 (369)
                      +++++||+||.+.              .+|+++.+++..+++++++ ++  |++||-..+-..-++    ... -.|+|+
T Consensus       389 ~~l~~aDlVIEAV--------------~E~l~iK~~vf~~le~~~~~~a--IlASNTSsl~i~~ia----~~~-~~p~r~  447 (742)
T 3zwc_A          389 KELSTVDLVVEAV--------------FEDMNLKKKVFAELSALCKPGA--FLCTNTSALNVDDIA----SST-DRPQLV  447 (742)
T ss_dssp             GGGGSCSEEEECC--------------CSCHHHHHHHHHHHHHHSCTTC--EEEECCSSSCHHHHH----TTS-SCGGGE
T ss_pred             HHHhhCCEEEEec--------------cccHHHHHHHHHHHhhcCCCCc--eEEecCCcCChHHHH----hhc-CCcccc
Confidence            6799999999995              5789999999999999995 55  458999887443222    222 346889


Q ss_pred             EEec
Q 017551          163 LGVT  166 (369)
Q Consensus       163 iG~t  166 (369)
                      +|+.
T Consensus       448 ig~H  451 (742)
T 3zwc_A          448 IGTH  451 (742)
T ss_dssp             EEEE
T ss_pred             cccc
Confidence            9974

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=98.43  E-value=3e-07  Score=86.66  Aligned_cols=122  Identities=16%  Similarity=0.187  Sum_probs=77.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhc----------ccC-------CCeEEEEeCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISH----------MDT-------GAVVRGFLGQP   80 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~----------~~~-------~~~v~~~~~t~   80 (369)
                      .+||+|||+ |.+|+.++..++..+.  +|+++|+++.  ......+.+          ...       ..++..   ++
T Consensus         4 ~~kV~VIGa-G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~---~~   77 (283)
T 4e12_A            4 ITNVTVLGT-GVLGSQIAFQTAFHGF--AVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY---SD   77 (283)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE---ES
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE---eC
Confidence            469999999 9999999999999998  9999999872  111111100          000       012343   35


Q ss_pred             ChhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCChhHHHHHHHHHhCCCCC
Q 017551           81 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDP  159 (369)
Q Consensus        81 dl~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~  159 (369)
                      ++.+++++||+||++.              ..+..+.+++..++..++ |++++  +||-..+...-+++   ..  -.+
T Consensus        78 ~~~~~~~~aDlVi~av--------------~~~~~~~~~v~~~l~~~~~~~~il--~s~tS~~~~~~la~---~~--~~~  136 (283)
T 4e12_A           78 DLAQAVKDADLVIEAV--------------PESLDLKRDIYTKLGELAPAKTIF--ATNSSTLLPSDLVG---YT--GRG  136 (283)
T ss_dssp             CHHHHTTTCSEEEECC--------------CSCHHHHHHHHHHHHHHSCTTCEE--EECCSSSCHHHHHH---HH--SCG
T ss_pred             CHHHHhccCCEEEEec--------------cCcHHHHHHHHHHHHhhCCCCcEE--EECCCCCCHHHHHh---hc--CCC
Confidence            7878899999999985              223556777778888887 45644  45544432221122   22  124


Q ss_pred             CcEEEechh
Q 017551          160 KKLLGVTML  168 (369)
Q Consensus       160 ~kviG~t~L  168 (369)
                      .+++|+...
T Consensus       137 ~~~ig~h~~  145 (283)
T 4e12_A          137 DKFLALHFA  145 (283)
T ss_dssp             GGEEEEEEC
T ss_pred             cceEEEccC
Confidence            678887543

>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}

Probab=98.35  E-value=7.7e-07  Score=89.70  Aligned_cols=119  Identities=16%  Similarity=0.246  Sum_probs=78.3

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHH-----H-Hhhccc---------CCCeEEEEeCCCChhhh
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVT-----A-DISHMD---------TGAVVRGFLGQPQLENA   85 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~-----~-dL~~~~---------~~~~v~~~~~t~dl~~a   85 (369)
                      +||+|||+ |.+|+.+|..++..++  +|+++|+++.++..     . .+....         ...+++.   ++|+ ++
T Consensus        55 ~kVaVIGa-G~MG~~IA~~la~aG~--~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~---t~dl-~a  127 (460)
T 3k6j_A           55 NSVAIIGG-GTMGKAMAICFGLAGI--ETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKI---TSDF-HK  127 (460)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEE---ESCG-GG
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCC--eEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEE---eCCH-HH
Confidence            69999999 9999999999999998  99999998732211     0 111100         0134554   3566 58


Q ss_pred             cCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEE
Q 017551           86 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  164 (369)
Q Consensus        86 l~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG  164 (369)
                      +++||+||++.              .++..+.+++..++.++++ ++++  +||-..+-..-+    .... -.|.|++|
T Consensus       128 l~~aDlVIeAV--------------pe~~~vk~~v~~~l~~~~~~~aIl--asnTSsl~i~~i----a~~~-~~p~r~iG  186 (460)
T 3k6j_A          128 LSNCDLIVESV--------------IEDMKLKKELFANLENICKSTCIF--GTNTSSLDLNEI----SSVL-RDPSNLVG  186 (460)
T ss_dssp             CTTCSEEEECC--------------CSCHHHHHHHHHHHHTTSCTTCEE--EECCSSSCHHHH----HTTS-SSGGGEEE
T ss_pred             HccCCEEEEcC--------------CCCHHHHHHHHHHHHhhCCCCCEE--EecCCChhHHHH----HHhc-cCCcceEE
Confidence            99999999985              2356778888889998884 5644  566555432211    1221 12457777


Q ss_pred             ech
Q 017551          165 VTM  167 (369)
Q Consensus       165 ~t~  167 (369)
                      +..
T Consensus       187 ~Hf  189 (460)
T 3k6j_A          187 IHF  189 (460)
T ss_dssp             EEC
T ss_pred             EEe
Confidence            643

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=98.34  E-value=2.4e-06  Score=81.01  Aligned_cols=124  Identities=14%  Similarity=0.190  Sum_probs=76.4

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHH---H---H-hhccc-C-------------CCeE
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVT---A---D-ISHMD-T-------------GAVV   73 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~---~---d-L~~~~-~-------------~~~v   73 (369)
                      ..+.+||+|||+ |.+|+.++..|+..++  +|+++|+++.  ....   .   + +.... .             ..++
T Consensus        12 ~~~~~~I~VIG~-G~mG~~iA~~la~~G~--~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i   88 (302)
T 1f0y_A           12 KIIVKHVTVIGG-GLMGAGIAQVAAATGH--TVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTI   88 (302)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTE
T ss_pred             cccCCEEEEECC-CHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhce
Confidence            334568999999 9999999999999987  9999999862  1110   0   0 00000 0             0134


Q ss_pred             EEEeCCCChhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCChhHHHHHHHH
Q 017551           74 RGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFK  152 (369)
Q Consensus        74 ~~~~~t~dl~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~i~ae~~~  152 (369)
                      +.   ++|+.+++++||+||++.  |            .+..+.+++...+..+++ ++++  +||-..+-..   + +.
T Consensus        89 ~~---~~~~~~~~~~aD~Vi~av--p------------~~~~~~~~v~~~l~~~~~~~~iv--~s~ts~i~~~---~-l~  145 (302)
T 1f0y_A           89 AT---STDAASVVHSTDLVVEAI--V------------ENLKVKNELFKRLDKFAAEHTIF--ASNTSSLQIT---S-IA  145 (302)
T ss_dssp             EE---ESCHHHHTTSCSEEEECC--C------------SCHHHHHHHHHHHTTTSCTTCEE--EECCSSSCHH---H-HH
T ss_pred             EE---ecCHHHhhcCCCEEEEcC--c------------CcHHHHHHHHHHHHhhCCCCeEE--EECCCCCCHH---H-HH
Confidence            43   357777999999999985  2            234556677778887774 5644  4555444221   1 11


Q ss_pred             HhCCCCCCcEEEech
Q 017551          153 KAGTYDPKKLLGVTM  167 (369)
Q Consensus       153 ~~~~~~~~kviG~t~  167 (369)
                      ... -.+.+++|+..
T Consensus       146 ~~~-~~~~~~~g~h~  159 (302)
T 1f0y_A          146 NAT-TRQDRFAGLHF  159 (302)
T ss_dssp             TTS-SCGGGEEEEEE
T ss_pred             Hhc-CCcccEEEEec
Confidence            221 12457777754

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=98.30  E-value=3.1e-06  Score=84.60  Aligned_cols=119  Identities=18%  Similarity=0.241  Sum_probs=75.7

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhccc--C--------------CCeEEEEeCCCChhh
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD--T--------------GAVVRGFLGQPQLEN   84 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~--~--------------~~~v~~~~~t~dl~~   84 (369)
                      |||+|||+ |.||.+++..|+..+.  +|+++|+++.+..  .+....  .              ..++..   ++|+.+
T Consensus         1 mkI~VIG~-G~vG~~~A~~la~~G~--~V~~~d~~~~~~~--~l~~~~~~i~e~~l~~~~~~~~~~g~l~~---t~~~~~   72 (436)
T 1mv8_A            1 MRISIFGL-GYVGAVCAGCLSARGH--EVIGVDVSSTKID--LINQGKSPIVEPGLEALLQQGRQTGRLSG---TTDFKK   72 (436)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTC--EEEEECSCHHHHH--HHHTTCCSSCCTTHHHHHHHHHHTTCEEE---ESCHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCC--EEEEEECCHHHHH--HHhCCCCCcCCCCHHHHHHhhcccCceEE---eCCHHH
Confidence            69999999 9999999999999987  9999999862211  111100  0              123543   357778


Q ss_pred             hcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-C---CeEEEEe-cCCCCChhHHHHHHHHH
Q 017551           85 ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-P---NATVNLI-SNPVNSTVPIAAEVFKK  153 (369)
Q Consensus        85 al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p---~a~viv~-tNPv~~~t~i~ae~~~~  153 (369)
                      ++++||+||++.+.|.....      ..++..+.++++.+..+. |   +.+|+.. |+|.+.+...+.+.+.+
T Consensus        73 ~~~~aDvviiaVptp~~~~~------~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~  140 (436)
T 1mv8_A           73 AVLDSDVSFICVGTPSKKNG------DLDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIED  140 (436)
T ss_dssp             HHHTCSEEEECCCCCBCTTS------SBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHH
T ss_pred             HhccCCEEEEEcCCCcccCC------CcchHHHHHHHHHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHH
Confidence            89999999999876653221      112233444455555443 4   5666554 78887744444444444

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=98.30  E-value=5e-06  Score=83.64  Aligned_cols=112  Identities=17%  Similarity=0.196  Sum_probs=75.1

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHhhccc------------CCCeEEEEeCCCChhhhc
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMD------------TGAVVRGFLGQPQLENAL   86 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~~------------~~~~v~~~~~t~dl~~al   86 (369)
                      |||+|||+ |.+|.+++..|+..+.  +|+++|+++.+  ..........            ...+++.   ++|+.+++
T Consensus         3 mkI~VIG~-G~vG~~lA~~La~~G~--~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~---t~d~~ea~   76 (450)
T 3gg2_A            3 LDIAVVGI-GYVGLVSATCFAELGA--NVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRF---GTEIEQAV   76 (450)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEE---ESCHHHHG
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCC--EEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEE---ECCHHHHH
Confidence            79999999 9999999999999998  99999998622  1111100000            0234554   46788889


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEec-CCCCChh
Q 017551           87 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS-NPVNSTV  144 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t-NPv~~~t  144 (369)
                      ++||+||++.+.|..++.      ..++..+.++++.+..+. ++.+|+..| .|.+..-
T Consensus        77 ~~aDvViiaVptp~~~~~------~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgt~~  130 (450)
T 3gg2_A           77 PEADIIFIAVGTPAGEDG------SADMSYVLDAARSIGRAMSRYILIVTKSTVPVGSYR  130 (450)
T ss_dssp             GGCSEEEECCCCCBCTTS------SBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHH
T ss_pred             hcCCEEEEEcCCCcccCC------CcChHHHHHHHHHHHhhCCCCCEEEEeeeCCCcchH
Confidence            999999999877765432      234455666777777766 455555543 4555443

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=98.27  E-value=5.7e-06  Score=74.82  Aligned_cols=112  Identities=17%  Similarity=0.181  Sum_probs=77.9

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      +.|||.|+||+|++|+.++..|+..+.  +|++++.+.....  .+.+......+.... +.++.++++++|+||..+|.
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~--~V~~~~R~~~~~~--~~~~~~~~~~~~~Dl-~~~~~~~~~~~D~vi~~ag~   94 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGH--EPVAMVRNEEQGP--ELRERGASDIVVANL-EEDFSHAFASIDAVVFAAGS   94 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSGGGHH--HHHHTTCSEEEECCT-TSCCGGGGTTCSEEEECCCC
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCC--eEEEEECChHHHH--HHHhCCCceEEEccc-HHHHHHHHcCCCEEEECCCC
Confidence            357999999999999999999999987  9999999863211  121110000111111 14567899999999999986


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 017551           99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      ...  ......+..|+.....+++.+.+.... .++++|-
T Consensus        95 ~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~~-~iv~~SS  131 (236)
T 3e8x_A           95 GPH--TGADKTILIDLWGAIKTIQEAEKRGIK-RFIMVSS  131 (236)
T ss_dssp             CTT--SCHHHHHHTTTHHHHHHHHHHHHHTCC-EEEEECC
T ss_pred             CCC--CCccccchhhHHHHHHHHHHHHHcCCC-EEEEEec
Confidence            532  346667788999999999999887644 4555543

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=98.26  E-value=6.8e-06  Score=83.26  Aligned_cols=123  Identities=15%  Similarity=0.134  Sum_probs=79.7

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhC-CCCcEEEEEeCCCc--hhHHHHhhccc--C----------------CCeEEEEe
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNT--PGVTADISHMD--T----------------GAVVRGFL   77 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~-~~~~el~L~D~~~~--~g~~~dL~~~~--~----------------~~~v~~~~   77 (369)
                      +.|||+|||+ |.+|.++|..|+.. |+. +|+++|+++.  .+.+..|....  .                ..++..  
T Consensus        17 ~~mkIaVIGl-G~mG~~lA~~la~~~G~~-~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~--   92 (478)
T 3g79_A           17 PIKKIGVLGM-GYVGIPAAVLFADAPCFE-KVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFEC--   92 (478)
T ss_dssp             SCCEEEEECC-STTHHHHHHHHHHSTTCC-EEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEE--
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHhCCCC-eEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEE--
Confidence            4579999999 99999999999999 653 8999999874  22334444311  0                234554  


Q ss_pred             CCCChhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEe-cCCCCChhHHHHHHH
Q 017551           78 GQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLI-SNPVNSTVPIAAEVF  151 (369)
Q Consensus        78 ~t~dl~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~-tNPv~~~t~i~ae~~  151 (369)
                       ++| .+++++||+||++.+.|..+..++    ..++..+...++.+.++. |..+|++- |-|.+..-.+...++
T Consensus        93 -ttd-~ea~~~aDvViiaVptp~~~~~~~----~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~~~il  162 (478)
T 3g79_A           93 -TPD-FSRISELDAVTLAIQTPFANPKDL----EPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAKQIL  162 (478)
T ss_dssp             -ESC-GGGGGGCSEEEECCCCCCCSSCCS----SCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHHHHHH
T ss_pred             -eCc-HHHHhcCCEEEEecCCchhccCCc----cccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHHHHHH
Confidence             356 579999999999988776543210    123344555566666665 55555444 567666554443333

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=98.26  E-value=5.5e-06  Score=80.84  Aligned_cols=115  Identities=15%  Similarity=0.192  Sum_probs=77.2

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcc--------cCCCeEEEEeCCCChhhhcCCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM--------DTGAVVRGFLGQPQLENALTGM   89 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~--------~~~~~v~~~~~t~dl~~al~~A   89 (369)
                      ...|||+|||+ |.+|++++..|+.++.  +|.++|.++.......-.+.        .....+..   ++|+.+++++|
T Consensus        27 ~~~mkI~VIGa-G~mG~alA~~La~~G~--~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~---t~d~~ea~~~a  100 (356)
T 3k96_A           27 PFKHPIAILGA-GSWGTALALVLARKGQ--KVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKA---YCDLKASLEGV  100 (356)
T ss_dssp             CCCSCEEEECC-SHHHHHHHHHHHTTTC--CEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEE---ESCHHHHHTTC
T ss_pred             ccCCeEEEECc-cHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEE---ECCHHHHHhcC
Confidence            34589999999 9999999999999987  89999998622111100111        01223454   35788899999


Q ss_pred             cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCChhHHHHHHHHHh
Q 017551           90 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKA  154 (369)
Q Consensus        90 DiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~i~ae~~~~~  154 (369)
                      |+||++.  |              ...++++++++..+. |+.+++.++|-.+.-+..+++++.+.
T Consensus       101 DvVilaV--p--------------~~~~~~vl~~i~~~l~~~~ivvs~~kGi~~~t~~~se~i~~~  150 (356)
T 3k96_A          101 TDILIVV--P--------------SFAFHEVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATE  150 (356)
T ss_dssp             CEEEECC--C--------------HHHHHHHHHHHGGGCCTTCEEEECCCSCBTTTBCHHHHHHHH
T ss_pred             CEEEECC--C--------------HHHHHHHHHHHHHhcCCCCEEEEEeCCCCcCccCHHHHHHHH
Confidence            9999984  3              124677778888776 57788888886654322223444443

>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}

Probab=98.25  E-value=2.5e-06  Score=86.46  Aligned_cols=127  Identities=17%  Similarity=0.195  Sum_probs=80.0

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhccc---------------CCCeEEEEeCCCChh
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD---------------TGAVVRGFLGQPQLE   83 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~---------------~~~~v~~~~~t~dl~   83 (369)
                      +.|||+|||+ |.||.+++..|+..+...+|+++|+++.+..  .+....               ....++.   ++|+.
T Consensus         8 ~~mkI~VIG~-G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~--~l~~g~~~i~e~gl~~~~~~~~~~~l~~---t~~~~   81 (481)
T 2o3j_A            8 KVSKVVCVGA-GYVGGPTCAMIAHKCPHITVTVVDMNTAKIA--EWNSDKLPIYEPGLDEIVFAARGRNLFF---SSDIP   81 (481)
T ss_dssp             CCCEEEEECC-STTHHHHHHHHHHHCTTSEEEEECSCHHHHH--HHTSSSCSSCCTTHHHHHHHHBTTTEEE---ESCHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEECCHHHHH--HHHCCCCCcCCCCHHHHHHHhhcCCEEE---ECCHH
Confidence            3579999999 9999999999998743339999999862211  122100               0123443   35777


Q ss_pred             hhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEe-cCCCCChhHHHHHHHHH
Q 017551           84 NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLI-SNPVNSTVPIAAEVFKK  153 (369)
Q Consensus        84 ~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~-tNPv~~~t~i~ae~~~~  153 (369)
                      +++++||+||++.+.|.+.+.++.+ -..++..+.++++.|.++.+ +.+|+.. |+|.+..-.+. +.+.+
T Consensus        82 ~~~~~aDvvii~Vptp~~~~g~~~~-~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt~~~l~-~~l~~  151 (481)
T 2o3j_A           82 KAIAEADLIFISVNTPTKMYGRGKG-MAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKAAESIG-CILRE  151 (481)
T ss_dssp             HHHHHCSEEEECCCCCBCCSSTTTT-TSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHH-HHHHH
T ss_pred             HHhhcCCEEEEecCCcccccccccc-CCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCHHHHHH-HHHHH
Confidence            8899999999998887654322211 01223445666677777764 5555443 78888764433 44444

>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}

Probab=98.25  E-value=3.5e-06  Score=85.08  Aligned_cols=119  Identities=15%  Similarity=0.190  Sum_probs=75.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--h-hHH--HH----------hhcccC-CCeEEEEeCCCChh
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--P-GVT--AD----------ISHMDT-GAVVRGFLGQPQLE   83 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~-g~~--~d----------L~~~~~-~~~v~~~~~t~dl~   83 (369)
                      .+||+|||+ |.+|+.++..++..++  +|+++|+++.  . +..  .+          +..... ....+.   ++++ 
T Consensus        37 ~~kV~VIGa-G~MG~~iA~~la~~G~--~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i---~~~~-  109 (463)
T 1zcj_A           37 VSSVGVLGL-GTMGRGIAISFARVGI--SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF---SSST-  109 (463)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTC--EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE---ESCG-
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh---cCCH-
Confidence            469999999 9999999999999998  9999999861  1 111  00          000000 112232   3566 


Q ss_pred             hhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCChhHHHHHHHHHhCCCCCCcE
Q 017551           84 NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPKKL  162 (369)
Q Consensus        84 ~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kv  162 (369)
                      +++++||+||++.  |            .+..+.+++..++..+++ ++++  +||...+-+.-++    .... .+.++
T Consensus       110 ~~~~~aDlVIeaV--p------------e~~~~k~~v~~~l~~~~~~~~ii--~snTs~~~~~~la----~~~~-~~~~~  168 (463)
T 1zcj_A          110 KELSTVDLVVEAV--F------------EDMNLKKKVFAELSALCKPGAFL--CTNTSALNVDDIA----SSTD-RPQLV  168 (463)
T ss_dssp             GGGTTCSEEEECC--C------------SCHHHHHHHHHHHHHHSCTTCEE--EECCSSSCHHHHH----TTSS-CGGGE
T ss_pred             HHHCCCCEEEEcC--C------------CCHHHHHHHHHHHHhhCCCCeEE--EeCCCCcCHHHHH----HHhc-CCcce
Confidence            6899999999995  2            245667778888888874 5544  4577765432222    2221 24677


Q ss_pred             EEec
Q 017551          163 LGVT  166 (369)
Q Consensus       163 iG~t  166 (369)
                      +|+.
T Consensus       169 ig~h  172 (463)
T 1zcj_A          169 IGTH  172 (463)
T ss_dssp             EEEE
T ss_pred             EEee
Confidence            7763

>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}

Probab=98.24  E-value=7.7e-06  Score=81.98  Aligned_cols=126  Identities=18%  Similarity=0.165  Sum_probs=83.2

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHH-------------HHh-hcccCCCeEEEEeCCCCh
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVT-------------ADI-SHMDTGAVVRGFLGQPQL   82 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~-------------~dL-~~~~~~~~v~~~~~t~dl   82 (369)
                      ..+..+|+|||. |+||.+++..++..++  +|+.+|+++.+-..             .++ .+.....++++   ++|.
T Consensus        18 ~~~m~~IaViGl-GYVGLp~A~~~A~~G~--~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~---tt~~   91 (444)
T 3vtf_A           18 GSHMASLSVLGL-GYVGVVHAVGFALLGH--RVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSF---AESA   91 (444)
T ss_dssp             TCCCCEEEEECC-SHHHHHHHHHHHHHTC--EEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE---CSSH
T ss_pred             CCCCCEEEEEcc-CHHHHHHHHHHHhCCC--cEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeE---EcCH
Confidence            445679999999 9999999999999888  99999999722111             111 11112346665   5678


Q ss_pred             hhhcCCCcEEEEcCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHhhhCCCeEEEE-ecCCCCChhHHHHHHH
Q 017551           83 ENALTGMDLVIIPAGVPRKPGM-TRDDLFNINAGIVRTLCEGIAKCCPNATVNL-ISNPVNSTVPIAAEVF  151 (369)
Q Consensus        83 ~~al~~ADiVii~ag~p~k~g~-~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv-~tNPv~~~t~i~ae~~  151 (369)
                      .+++++||++|++.+.|.++.. ..+.++   ....+.+++.++...+..+|++ -|-|++..-.++...+
T Consensus        92 ~~ai~~ad~~~I~VpTP~~~d~~~Dl~~v---~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~l  159 (444)
T 3vtf_A           92 EEAVAATDATFIAVGTPPAPDGSADLRYV---EAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARAV  159 (444)
T ss_dssp             HHHHHTSSEEEECCCCCBCTTSSBCCHHH---HHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHHH
T ss_pred             HHHHhcCCceEEEecCCCCCCCCCCcHHH---HHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHHH
Confidence            8999999999999988876532 222222   2445666666665555554444 3788887655443333

>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}

Probab=98.22  E-value=2.2e-06  Score=81.54  Aligned_cols=119  Identities=20%  Similarity=0.231  Sum_probs=76.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHH-hhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTAD-ISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~d-L~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      -+||+|||+ |.||+.+|..++ .++  +|++||++.. ...+.+ +.+.. ...++..   +++. ++++||+||.+. 
T Consensus        12 ~~~V~vIG~-G~MG~~iA~~la-aG~--~V~v~d~~~~~~~~~~~~l~~~~-~~~i~~~---~~~~-~~~~aDlVieav-   81 (293)
T 1zej_A           12 HMKVFVIGA-GLMGRGIAIAIA-SKH--EVVLQDVSEKALEAAREQIPEEL-LSKIEFT---TTLE-KVKDCDIVMEAV-   81 (293)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHH-TTS--EEEEECSCHHHHHHHHHHSCGGG-GGGEEEE---SSCT-TGGGCSEEEECC-
T ss_pred             CCeEEEEee-CHHHHHHHHHHH-cCC--EEEEEECCHHHHHHHHHHHHHHH-hCCeEEe---CCHH-HHcCCCEEEEcC-
Confidence            479999999 999999999999 888  9999999872 111121 21111 1245542   4564 489999999985 


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEechhc
Q 017551           98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLD  169 (369)
Q Consensus        98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t~Ld  169 (369)
                                   .++..+.+.+..+++.. |++++  +||-..+-...+    .... -.+.|++|+..++
T Consensus        82 -------------pe~~~vk~~l~~~l~~~-~~~Il--asntSti~~~~~----a~~~-~~~~r~~G~Hf~~  132 (293)
T 1zej_A           82 -------------FEDLNTKVEVLREVERL-TNAPL--CSNTSVISVDDI----AERL-DSPSRFLGVHWMN  132 (293)
T ss_dssp             -------------CSCHHHHHHHHHHHHTT-CCSCE--EECCSSSCHHHH----HTTS-SCGGGEEEEEECS
T ss_pred             -------------cCCHHHHHHHHHHHhcC-CCCEE--EEECCCcCHHHH----HHHh-hcccceEeEEecC
Confidence                         33466667777778888 88865  455544322111    1222 1246788886655

>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*

Probab=98.17  E-value=4.1e-06  Score=82.98  Aligned_cols=113  Identities=18%  Similarity=0.251  Sum_probs=72.6

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhccc--------------CCCeEEEEeCCCChhhhc
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD--------------TGAVVRGFLGQPQLENAL   86 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~--------------~~~~v~~~~~t~dl~~al   86 (369)
                      |||+|||+ |.||.+++..|+. +.  +|+++|+++.+..  .+....              ...++..   ++++.+++
T Consensus         1 MkI~VIG~-G~vG~~~A~~La~-G~--~V~~~d~~~~~~~--~l~~~~~~i~e~~l~~~~~~~~~~l~~---t~~~~~~~   71 (402)
T 1dlj_A            1 MKIAVAGS-GYVGLSLGVLLSL-QN--EVTIVDILPSKVD--KINNGLSPIQDEYIEYYLKSKQLSIKA---TLDSKAAY   71 (402)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTT-TS--EEEEECSCHHHHH--HHHTTCCSSCCHHHHHHHHHSCCCEEE---ESCHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHhC-CC--EEEEEECCHHHHH--HHHcCCCCcCCCCHHHHHHhccCcEEE---eCCHHHHh
Confidence            69999999 9999999999998 75  9999999862211  121110              0123443   35677889


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEE-ecCCCCChhHHH
Q 017551           87 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL-ISNPVNSTVPIA  147 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv-~tNPv~~~t~i~  147 (369)
                      ++||+||++...|...+..+.|     +..+.++++.+....|+.+|+. .|||.+....+.
T Consensus        72 ~~aDvviiavpt~~~~~~~~~d-----l~~v~~v~~~i~~l~~~~iVV~~ST~~~g~~~~l~  128 (402)
T 1dlj_A           72 KEAELVIIATPTNYNSRINYFD-----TQHVETVIKEVLSVNSHATLIIKSTIPIGFITEMR  128 (402)
T ss_dssp             HHCSEEEECCCCCEETTTTEEC-----CHHHHHHHHHHHHHCSSCEEEECSCCCTTHHHHHH
T ss_pred             cCCCEEEEecCCCcccCCCCcc-----HHHHHHHHHHHHhhCCCCEEEEeCCCCccHHHHHH
Confidence            9999999997665322222222     1234444444544457776666 699998875543

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=98.16  E-value=3e-05  Score=73.28  Aligned_cols=116  Identities=13%  Similarity=-0.001  Sum_probs=78.3

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchh--HHHHhhcccCCCeEEEE-e----CCCChhhhcCCCc
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTGAVVRGF-L----GQPQLENALTGMD   90 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g--~~~dL~~~~~~~~v~~~-~----~t~dl~~al~~AD   90 (369)
                      .+.++|.|+||+|++|++++..|+..+.  +|+++|.+....  ....+.+.. ...+..+ .    ...++.++++++|
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d   85 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGY--KVRGTARSASKLANLQKRWDAKY-PGRFETAVVEDMLKQGAYDEVIKGAA   85 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHHS-TTTEEEEECSCTTSTTTTTTTTTTCS
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCC--EEEEEeCCcccHHHHHHHhhccC-CCceEEEEecCCcChHHHHHHHcCCC
Confidence            3457999999999999999999999887  999999875221  111111100 1233322 1    1234556788999


Q ss_pred             EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           91 LVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        91 iVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      +||.+||.... +......+..|+.....+.+.+.+......++++|
T Consensus        86 ~vih~A~~~~~-~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~S  131 (342)
T 1y1p_A           86 GVAHIASVVSF-SNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTS  131 (342)
T ss_dssp             EEEECCCCCSC-CSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEEC
T ss_pred             EEEEeCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence            99999986532 34566778899999999999887533334566655

>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}

Probab=98.15  E-value=4.2e-06  Score=84.98  Aligned_cols=101  Identities=22%  Similarity=0.315  Sum_probs=69.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHH----hhcccC------------CCeEEEEeCCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTAD----ISHMDT------------GAVVRGFLGQPQ   81 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~d----L~~~~~------------~~~v~~~~~t~d   81 (369)
                      .+||+|||+ |.+|+.++..++..++  +|+++|+++.  ......    +.....            ..+++.   ++|
T Consensus         5 ~~kVgVIGa-G~MG~~IA~~la~aG~--~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~---~~~   78 (483)
T 3mog_A            5 VQTVAVIGS-GTMGAGIAEVAASHGH--QVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIP---VTD   78 (483)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTC--CEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEE---ECC
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeE---eCC
Confidence            459999999 9999999999999998  9999999871  111111    111100            113444   356


Q ss_pred             hhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCCh
Q 017551           82 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNST  143 (369)
Q Consensus        82 l~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~  143 (369)
                      + +++++||+||++.              ..+..+.+++..++.++++ ++++  +||-..+-
T Consensus        79 ~-~~~~~aDlVIeAV--------------pe~~~vk~~v~~~l~~~~~~~~Il--asntSti~  124 (483)
T 3mog_A           79 I-HALAAADLVIEAA--------------SERLEVKKALFAQLAEVCPPQTLL--TTNTSSIS  124 (483)
T ss_dssp             G-GGGGGCSEEEECC--------------CCCHHHHHHHHHHHHHHSCTTCEE--EECCSSSC
T ss_pred             H-HHhcCCCEEEEcC--------------CCcHHHHHHHHHHHHHhhccCcEE--EecCCCCC
Confidence            6 5799999999985              2346677788888888885 5543  56665553

>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}

Probab=98.13  E-value=1e-05  Score=86.00  Aligned_cols=101  Identities=23%  Similarity=0.340  Sum_probs=70.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc---hhHH--HHh-h---cc---------cCCCeEEEEeCCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVT--ADI-S---HM---------DTGAVVRGFLGQPQ   81 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~---~g~~--~dL-~---~~---------~~~~~v~~~~~t~d   81 (369)
                      .+||+|||+ |.+|+.++..++..++  +|+++|+++.   .+..  .+. .   ..         ....+++.   ++|
T Consensus       312 ~~kV~VIGa-G~MG~~iA~~la~aG~--~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~---~~d  385 (725)
T 2wtb_A          312 IKKVAIIGG-GLMGSGIATALILSNY--PVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKG---SLD  385 (725)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHTTTC--CEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEE---ESS
T ss_pred             CcEEEEEcC-CHhhHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEE---eCC
Confidence            368999999 9999999999999998  9999999862   1110  111 0   00         01234554   346


Q ss_pred             hhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCC
Q 017551           82 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS  142 (369)
Q Consensus        82 l~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~  142 (369)
                      + +++++||+||++.              .++..+.+++..++.++++... |++||...+
T Consensus       386 ~-~~~~~aDlVIeaV--------------pe~~~vk~~v~~~l~~~~~~~~-IlasntStl  430 (725)
T 2wtb_A          386 Y-ESFRDVDMVIEAV--------------IENISLKQQIFADLEKYCPQHC-ILASNTSTI  430 (725)
T ss_dssp             S-GGGTTCSEEEECC--------------CSCHHHHHHHHHHHHHHSCTTC-EEEECCSSS
T ss_pred             H-HHHCCCCEEEEcC--------------cCCHHHHHHHHHHHHhhCCCCc-EEEeCCCCC
Confidence            6 6899999999995              2346677788888888885432 347887655

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=98.12  E-value=5.6e-06  Score=83.93  Aligned_cols=110  Identities=16%  Similarity=0.170  Sum_probs=73.3

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhccc----------------CCCeEEEEeCCCCh
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD----------------TGAVVRGFLGQPQL   82 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~----------------~~~~v~~~~~t~dl   82 (369)
                      ..|||+|||+ |.||.+++..|+..+.  +|+++|+++.+..  .+....                ...+++.   ++|+
T Consensus         7 ~~~~I~VIG~-G~vG~~lA~~la~~G~--~V~~~d~~~~~v~--~l~~~~~~i~e~gl~~~l~~~~~~~~l~~---ttd~   78 (478)
T 2y0c_A            7 GSMNLTIIGS-GSVGLVTGACLADIGH--DVFCLDVDQAKID--ILNNGGVPIHEPGLKEVIARNRSAGRLRF---STDI   78 (478)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHHHH--HHHTTCCSSCCTTHHHHHHHHHHTTCEEE---ECCH
T ss_pred             CCceEEEECc-CHHHHHHHHHHHhCCC--EEEEEECCHHHHH--HHHCCCCCcCCCCHHHHHHHhcccCCEEE---ECCH
Confidence            3689999999 9999999999999998  9999999862211  111110                0123554   4677


Q ss_pred             hhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEec-CCCCC
Q 017551           83 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS-NPVNS  142 (369)
Q Consensus        83 ~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t-NPv~~  142 (369)
                      .+++++||+||++...|.+...      ..++..+.++++.+..+. |+.+|++.| -|.+.
T Consensus        79 ~~a~~~aDvviiaVptp~~~~~------~~dl~~v~~v~~~i~~~l~~~~iVV~~STv~~gt  134 (478)
T 2y0c_A           79 EAAVAHGDVQFIAVGTPPDEDG------SADLQYVLAAARNIGRYMTGFKVIVDKSTVPVGT  134 (478)
T ss_dssp             HHHHHHCSEEEECCCCCBCTTS------SBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTH
T ss_pred             HHHhhcCCEEEEEeCCCcccCC------CccHHHHHHHHHHHHHhcCCCCEEEEeCCcCCCc
Confidence            7889999999999877754321      123455666667777665 456555443 34444

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=98.09  E-value=1.8e-05  Score=70.14  Aligned_cols=99  Identities=12%  Similarity=0.107  Sum_probs=68.7

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC---CCChhhhcCCCcEEEEcCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG---QPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~---t~dl~~al~~ADiVii~ag   97 (369)
                      |||.|+||+|++|+.++..|+..+.  +|++++.+.....  ++.     ..+..+.+   ..+. +++.++|+||.++|
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~--~~~-----~~~~~~~~D~~d~~~-~~~~~~d~vi~~ag   70 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGH--EVTAIVRNAGKIT--QTH-----KDINILQKDIFDLTL-SDLSDQNVVVDAYG   70 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCSHHHH--HHC-----SSSEEEECCGGGCCH-HHHTTCSEEEECCC
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC--EEEEEEcCchhhh--hcc-----CCCeEEeccccChhh-hhhcCCCEEEECCc
Confidence            6999999999999999999999987  9999999863211  121     11222211   1122 68999999999998


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      .+...       ...|+...+.+++.+.+... ..++++|
T Consensus        71 ~~~~~-------~~~~~~~~~~l~~a~~~~~~-~~~v~~S  102 (221)
T 3ew7_A           71 ISPDE-------AEKHVTSLDHLISVLNGTVS-PRLLVVG  102 (221)
T ss_dssp             SSTTT-------TTSHHHHHHHHHHHHCSCCS-SEEEEEC
T ss_pred             CCccc-------cchHHHHHHHHHHHHHhcCC-ceEEEEe
Confidence            86432       24477888888888887643 3455554

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=98.09  E-value=1.1e-05  Score=76.96  Aligned_cols=110  Identities=18%  Similarity=0.243  Sum_probs=75.2

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEE-eCCCChhhhcCCCcEEEEc
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQLENALTGMDLVIIP   95 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~-~~t~dl~~al~~ADiVii~   95 (369)
                      ..+.+||.|+||+|++|+.++..|+..+.  +|+++|.+...      ..   ...+... ....++.++++++|+||.+
T Consensus        16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~--~V~~~~r~~~~------~~---~~~~~~Dl~d~~~~~~~~~~~d~vih~   84 (347)
T 4id9_A           16 PRGSHMILVTGSAGRVGRAVVAALRTQGR--TVRGFDLRPSG------TG---GEEVVGSLEDGQALSDAIMGVSAVLHL   84 (347)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTTC--CEEEEESSCCS------SC---CSEEESCTTCHHHHHHHHTTCSEEEEC
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCCC--EEEEEeCCCCC------CC---ccEEecCcCCHHHHHHHHhCCCEEEEC
Confidence            34468999999999999999999999987  89999987532      00   0111111 1112356788999999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           96 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        96 ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      |+............+..|+.....+++.+.+....-+|.+-|
T Consensus        85 A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS  126 (347)
T 4id9_A           85 GAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASS  126 (347)
T ss_dssp             CCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred             CcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence            986543333446778899999999999998866554444434

>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*

Probab=98.07  E-value=1.6e-05  Score=79.46  Aligned_cols=117  Identities=21%  Similarity=0.256  Sum_probs=71.5

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhccc--------------CCCeEEEEeCCCCh
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD--------------TGAVVRGFLGQPQL   82 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~--------------~~~~v~~~~~t~dl   82 (369)
                      .++.|||+|||+ |.+|.+++..|++ +.  +|+++|+++.+..  .+....              ....++.   ++|+
T Consensus        33 ~~~~mkIaVIGl-G~mG~~lA~~La~-G~--~V~~~D~~~~~v~--~l~~g~~~i~e~~l~~ll~~~~~~l~~---ttd~  103 (432)
T 3pid_A           33 GSEFMKITISGT-GYVGLSNGVLIAQ-NH--EVVALDIVQAKVD--MLNQKISPIVDKEIQEYLAEKPLNFRA---TTDK  103 (432)
T ss_dssp             --CCCEEEEECC-SHHHHHHHHHHHT-TS--EEEEECSCHHHHH--HHHTTCCSSCCHHHHHHHHHSCCCEEE---ESCH
T ss_pred             ccCCCEEEEECc-CHHHHHHHHHHHc-CC--eEEEEecCHHHhh--HHhccCCccccccHHHHHhhccCCeEE---EcCH
Confidence            345689999999 9999999999987 76  9999999862211  111100              0124444   4688


Q ss_pred             hhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe-cCCCCChhHHH
Q 017551           83 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI-SNPVNSTVPIA  147 (369)
Q Consensus        83 ~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~-tNPv~~~t~i~  147 (369)
                      ++++++||+||++...|..+....     -++..+.+.++.+....|+++|++- |.|.+..-.+.
T Consensus       104 ~ea~~~aDvViiaVPt~~~~~~~~-----~Dl~~V~~v~~~i~~l~~g~iVV~~STv~pgtt~~l~  164 (432)
T 3pid_A          104 HDAYRNADYVIIATPTDYDPKTNY-----FNTSTVEAVIRDVTEINPNAVMIIKSTIPVGFTRDIK  164 (432)
T ss_dssp             HHHHTTCSEEEECCCCEEETTTTE-----EECHHHHHHHHHHHHHCTTSEEEECSCCCTTHHHHHH
T ss_pred             HHHHhCCCEEEEeCCCcccccccc-----ccHHHHHHHHHHHHhcCCCcEEEEeCCCChHHHHHHH
Confidence            899999999999854442221111     1223344444444444577766554 57777655443

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=98.05  E-value=3.2e-05  Score=73.35  Aligned_cols=113  Identities=13%  Similarity=0.100  Sum_probs=71.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--h--hHHHHhhcccCCCeEEEEe----CCCChhhhcCCCcE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--P--GVTADISHMDTGAVVRGFL----GQPQLENALTGMDL   91 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~--g~~~dL~~~~~~~~v~~~~----~t~dl~~al~~ADi   91 (369)
                      .+||.|+||+|+||++++..|+..+.  +|+.++.+..  .  ....++..   ...+..+.    ...++.++++++|+
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~D~   83 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGY--AVNTTVRDPDNQKKVSHLLELQE---LGDLKIFRADLTDELSFEAPIAGCDF   83 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTC--EEEEEESCTTCTTTTHHHHHHGG---GSCEEEEECCTTTSSSSHHHHTTCSE
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCC--EEEEEEcCcchhhhHHHHHhcCC---CCcEEEEecCCCChHHHHHHHcCCCE
Confidence            46999999999999999999999887  8887776541  1  11122321   12233221    12456678999999


Q ss_pred             EEEcCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           92 VIIPAGVPRKPGMT-RDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        92 Vii~ag~p~k~g~~-r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ||.+|+........ ..+++..|+.....+.+.+.+...-..+|++|
T Consensus        84 Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~S  130 (338)
T 2rh8_A           84 VFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTS  130 (338)
T ss_dssp             EEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEEC
T ss_pred             EEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEe
Confidence            99998754211111 12367889999999999888764223455554

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=98.05  E-value=2.4e-05  Score=74.61  Aligned_cols=115  Identities=15%  Similarity=0.022  Sum_probs=78.0

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC---CCeEEEEeC----CCChhhhcCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT---GAVVRGFLG----QPQLENALTGM   89 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~---~~~v~~~~~----t~dl~~al~~A   89 (369)
                      .++||.|+||+|++|+.++..|...+.  +|+.+|...  ......++.....   ...+..+.+    ..++.++++++
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~  101 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKLNQ--VVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV  101 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence            457999999999999999999999887  999999865  2222222322110   023333321    12356788999


Q ss_pred             cEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEE
Q 017551           90 DLVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL  135 (369)
Q Consensus        90 DiVii~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv  135 (369)
                      |+||.+|+....+  .....+.+..|+.....+++.+.+....-+|.+
T Consensus       102 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~  149 (351)
T 3ruf_A          102 DHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYA  149 (351)
T ss_dssp             SEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEE
T ss_pred             CEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEE
Confidence            9999999864221  123456778899999999999988765544433

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=98.04  E-value=1.8e-05  Score=70.44  Aligned_cols=101  Identities=19%  Similarity=0.152  Sum_probs=70.1

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC---CCChhhhcCCCcEEEEcCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG---QPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~---t~dl~~al~~ADiVii~ag   97 (369)
                      |||.|+||+|++|+.++..|+..+.  +|++++.+....  .++..    ..+..+.+   ..+. +++.++|+||.++|
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~--~~~~~----~~~~~~~~D~~d~~~-~~~~~~d~vi~~ag   71 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGH--EVLAVVRDPQKA--ADRLG----ATVATLVKEPLVLTE-ADLDSVDAVVDALS   71 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHH--HHHTC----TTSEEEECCGGGCCH-HHHTTCSEEEECCC
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCC--EEEEEEeccccc--ccccC----CCceEEecccccccH-hhcccCCEEEECCc
Confidence            6899999999999999999999987  999999875221  12221    12222211   1122 67999999999998


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ....+..     ...|+...+.+++.+.+..  ..++++|
T Consensus        72 ~~~~~~~-----~~~n~~~~~~l~~a~~~~~--~~~v~~S  104 (224)
T 3h2s_A           72 VPWGSGR-----GYLHLDFATHLVSLLRNSD--TLAVFIL  104 (224)
T ss_dssp             CCTTSSC-----THHHHHHHHHHHHTCTTCC--CEEEEEC
T ss_pred             cCCCcch-----hhHHHHHHHHHHHHHHHcC--CcEEEEe
Confidence            7532222     2568888899999888776  4555554

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=98.03  E-value=1.3e-05  Score=76.03  Aligned_cols=109  Identities=19%  Similarity=0.168  Sum_probs=70.0

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC----CCChhhhcCCCcEEEEc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG----QPQLENALTGMDLVIIP   95 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~----t~dl~~al~~ADiVii~   95 (369)
                      .|||.|+||+|++|++++..|...+.  +|+++|.+....  .++.+    ..+..+.+    ..++.++++++|+||.+
T Consensus        13 ~M~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~--~~l~~----~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   84 (342)
T 2x4g_A           13 HVKYAVLGATGLLGHHAARAIRAAGH--DLVLIHRPSSQI--QRLAY----LEPECRVAEMLDHAGLERALRGLDGVIFS   84 (342)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECTTSCG--GGGGG----GCCEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEecChHhh--hhhcc----CCeEEEEecCCCHHHHHHHHcCCCEEEEC
Confidence            47999999999999999999999887  999999875221  11221    12222211    12355788999999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           96 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        96 ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ||..........+.+..|+.....+++.+.+....- ++++|
T Consensus        85 a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~-~v~~S  125 (342)
T 2x4g_A           85 AGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPR-ILYVG  125 (342)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHTCSC-EEEEC
T ss_pred             CccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCe-EEEEC
Confidence            986432223445677889999999999998875433 55554

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=98.02  E-value=5.6e-05  Score=71.73  Aligned_cols=117  Identities=13%  Similarity=0.047  Sum_probs=75.0

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcccC-CCeEEEEe----CCCChhhhcCCCcEE
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDT-GAVVRGFL----GQPQLENALTGMDLV   92 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~-~~~v~~~~----~t~dl~~al~~ADiV   92 (369)
                      +.++|.|+||+|++|++++..|+..+.  +|+..+.+.. .....++..... ...+..+.    ...++.++++++|+|
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   81 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGY--TVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGV   81 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCC--EEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEE
Confidence            456999999999999999999999887  8887777642 111122211110 01233221    124566789999999


Q ss_pred             EEcCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           93 IIPAGVPRKPGMTR-DDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        93 ii~ag~p~k~g~~r-~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      |.+|+......... .+.+..|+.....+.+.+.+...-..++++|
T Consensus        82 ih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~S  127 (337)
T 2c29_D           82 FHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTS  127 (337)
T ss_dssp             EECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEEC
T ss_pred             EEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEee
Confidence            99987542112222 3467889999999999988875333455554

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=98.01  E-value=2.9e-05  Score=72.97  Aligned_cols=119  Identities=20%  Similarity=0.259  Sum_probs=72.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhccc----CCC-----eEEEEeCCCChhhhcCCCc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD----TGA-----VVRGFLGQPQLENALTGMD   90 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~----~~~-----~v~~~~~t~dl~~al~~AD   90 (369)
                      .|||+|||+ |.+|+.++..|...+.  +|.++|.+.....  .+....    ...     .+...+ ..+..++++++|
T Consensus         3 ~m~i~iiG~-G~~G~~~a~~l~~~g~--~V~~~~r~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d   76 (316)
T 2ew2_A            3 AMKIAIAGA-GAMGSRLGIMLHQGGN--DVTLIDQWPAHIE--AIRKNGLIADFNGEEVVANLPIFS-PEEIDHQNEQVD   76 (316)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHHHH--HHHHHCEEEEETTEEEEECCCEEC-GGGCCTTSCCCS
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhCCC--cEEEEECCHHHHH--HHHhCCEEEEeCCCeeEecceeec-chhhcccCCCCC
Confidence            479999999 9999999999999887  9999999762211  111110    000     111111 112223445999


Q ss_pred             EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEE-Eech
Q 017551           91 LVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLL-GVTM  167 (369)
Q Consensus        91 iVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kvi-G~t~  167 (369)
                      +||++...                ....++.+.+..+. |+.+++..+|..+...     .+.+  .+++.+++ |.+.
T Consensus        77 ~vi~~v~~----------------~~~~~v~~~l~~~l~~~~~iv~~~~g~~~~~-----~l~~--~~~~~~vi~g~~~  132 (316)
T 2ew2_A           77 LIIALTKA----------------QQLDAMFKAIQPMITEKTYVLCLLNGLGHED-----VLEK--YVPKENILVGITM  132 (316)
T ss_dssp             EEEECSCH----------------HHHHHHHHHHGGGCCTTCEEEECCSSSCTHH-----HHTT--TSCGGGEEEEEEC
T ss_pred             EEEEEecc----------------ccHHHHHHHHHHhcCCCCEEEEecCCCCcHH-----HHHH--HcCCccEEEEEee
Confidence            99998510                12456666777665 6788888888776432     2222  35566777 5443

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=97.99  E-value=2.1e-05  Score=74.56  Aligned_cols=118  Identities=15%  Similarity=0.091  Sum_probs=76.3

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC-CC---ChhhhcCCCcEEEEc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QP---QLENALTGMDLVIIP   95 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~-t~---dl~~al~~ADiVii~   95 (369)
                      .|||.|+||+|++|++++..|+..+...+|+.+|.....+....+.+......+..+.+ -+   ++.+++.++|+||.+
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   82 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVHL   82 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEEEC
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEEEC
Confidence            47999999999999999999988763238999997641111111211111233443321 12   244667899999999


Q ss_pred             CCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           96 AGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        96 ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ||.....  .......+..|+.....+++.+.+......+|++|
T Consensus        83 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~S  126 (336)
T 2hun_A           83 AAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVS  126 (336)
T ss_dssp             CCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred             CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence            9864311  12334677889999999999999885444566655

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=97.99  E-value=2.3e-05  Score=74.39  Aligned_cols=112  Identities=21%  Similarity=0.152  Sum_probs=76.9

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHhhcccCCCeEEEEeC-C---CChhhhcCC--CcE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFLG-Q---PQLENALTG--MDL   91 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~---~~g~~~dL~~~~~~~~v~~~~~-t---~dl~~al~~--ADi   91 (369)
                      |||.|+||+|++|+.++..|+..+.  +|+++|.+.   ......++...   .++..+.+ -   .++.+++++  +|+
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~l~~~---~~~~~~~~Dl~d~~~~~~~~~~~~~d~   76 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGI--DLIVFDNLSRKGATDNLHWLSSL---GNFEFVHGDIRNKNDVTRLITKYMPDS   76 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCCSTTHHHHHHHHHTT---CCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCC--EEEEEeCCCccCchhhhhhhccC---CceEEEEcCCCCHHHHHHHHhccCCCE
Confidence            5899999999999999999999887  999999753   12122233321   12332221 1   234567777  999


Q ss_pred             EEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           92 VIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        92 Vii~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ||.+||.....  .......+..|+.....+++.+.+....+.++++|
T Consensus        77 vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~S  124 (347)
T 1orr_A           77 CFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSS  124 (347)
T ss_dssp             EEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             EEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEec
Confidence            99999864311  12345677889999999999999887655566665

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=97.98  E-value=3.7e-06  Score=75.29  Aligned_cols=104  Identities=14%  Similarity=0.113  Sum_probs=71.6

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC----CCChhhhcCCCcEEEEc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG----QPQLENALTGMDLVIIP   95 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~----t~dl~~al~~ADiVii~   95 (369)
                      ++||.|+||+|++|+.++..|...+.  +|++++.+....     .+.  ...+..+.+    ..++.++++++|+||.+
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~-----~~~--~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~   74 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNRGF--EVTAVVRHPEKI-----KIE--NEHLKVKKADVSSLDEVCEVCKGADAVISA   74 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTTTC--EEEEECSCGGGC-----CCC--CTTEEEECCCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEEcCcccc-----hhc--cCceEEEEecCCCHHHHHHHhcCCCEEEEe
Confidence            47999999999999999999999987  999999975221     110  123333321    12356788999999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           96 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        96 ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      +|....    ..+++..|+.....+++.+.+....- ++++|
T Consensus        75 a~~~~~----~~~~~~~n~~~~~~l~~~~~~~~~~~-~v~~S  111 (227)
T 3dhn_A           75 FNPGWN----NPDIYDETIKVYLTIIDGVKKAGVNR-FLMVG  111 (227)
T ss_dssp             CCC----------CCSHHHHHHHHHHHHHHHTTCSE-EEEEC
T ss_pred             CcCCCC----ChhHHHHHHHHHHHHHHHHHHhCCCE-EEEeC
Confidence            875421    12245678888999999998876444 55544

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=97.98  E-value=1.7e-05  Score=75.08  Aligned_cols=116  Identities=16%  Similarity=0.019  Sum_probs=75.6

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch---hHHHHhhcccCCCeEEEEeC-CC---ChhhhcCC-
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP---GVTADISHMDTGAVVRGFLG-QP---QLENALTG-   88 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~---g~~~dL~~~~~~~~v~~~~~-t~---dl~~al~~-   88 (369)
                      .++.+||.|+||+|++|+.++..|...+.  +|+++|.+...   ....++..   ...+..+.+ -+   ++.+++++ 
T Consensus        11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~   85 (335)
T 1rpn_A           11 GSMTRSALVTGITGQDGAYLAKLLLEKGY--RVHGLVARRSSDTRWRLRELGI---EGDIQYEDGDMADACSVQRAVIKA   85 (335)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCCSSCCCHHHHHTTC---GGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCeEEEECCCChHHHHHHHHHHHCCC--eEEEEeCCCccccccchhhccc---cCceEEEECCCCCHHHHHHHHHHc
Confidence            35568999999999999999999999887  99999987521   11222211   123333221 12   24456665 


Q ss_pred             -CcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           89 -MDLVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        89 -ADiVii~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                       .|+||.+||.....  .......+..|+.....+++.+.+......++++|
T Consensus        86 ~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~S  137 (335)
T 1rpn_A           86 QPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQAS  137 (335)
T ss_dssp             CCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred             CCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEe
Confidence             59999999865321  23456677889999999999998876434555554

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=97.98  E-value=1.9e-05  Score=75.19  Aligned_cols=119  Identities=15%  Similarity=0.114  Sum_probs=75.6

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC-C---CChhhhcCC--CcE
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-Q---PQLENALTG--MDL   91 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~-t---~dl~~al~~--ADi   91 (369)
                      .+.|||.|+||+|++|+.++..|+..+..-+|+..|..........+........+..+.+ -   .++.+++++  +|+
T Consensus        22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~  101 (346)
T 4egb_A           22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQV  101 (346)
T ss_dssp             --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCE
T ss_pred             cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCE
Confidence            4567999999999999999999998884448888887652211122222222234444332 1   234566776  999


Q ss_pred             EEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           92 VIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        92 Vii~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ||.+|+.....  .......+..|+.....+++.+.+....- +|++|
T Consensus       102 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~-~v~~S  148 (346)
T 4egb_A          102 IVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIK-LVQVS  148 (346)
T ss_dssp             EEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSE-EEEEE
T ss_pred             EEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCE-EEEeC
Confidence            99999865322  13345677899999999999998876544 44443

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=97.96  E-value=6e-05  Score=75.68  Aligned_cols=120  Identities=14%  Similarity=0.153  Sum_probs=78.3

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhccc----------------CCCeEEEEeCCCChh
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD----------------TGAVVRGFLGQPQLE   83 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~----------------~~~~v~~~~~t~dl~   83 (369)
                      ..+|+|||+ |.+|.++|..|+..|+  +|++||+++.+.  ..|....                ...+++.   ++|+.
T Consensus         8 ~~~~~vIGl-G~vG~~~A~~La~~G~--~V~~~D~~~~kv--~~l~~g~~~~~epgl~~~~~~~~~~g~l~~---ttd~~   79 (446)
T 4a7p_A            8 SVRIAMIGT-GYVGLVSGACFSDFGH--EVVCVDKDARKI--ELLHQNVMPIYEPGLDALVASNVKAGRLSF---TTDLA   79 (446)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCSTTH--HHHTTTCCSSCCTTHHHHHHHHHHTTCEEE---ESCHH
T ss_pred             ceEEEEEcC-CHHHHHHHHHHHHCCC--EEEEEeCCHHHH--HHHhcCCCCccCCCHHHHHHhhcccCCEEE---ECCHH
Confidence            459999999 9999999999999998  999999987321  1122110                0134554   46888


Q ss_pred             hhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEe-cCCCCChhHHHHHHHHH
Q 017551           84 NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLI-SNPVNSTVPIAAEVFKK  153 (369)
Q Consensus        84 ~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~-tNPv~~~t~i~ae~~~~  153 (369)
                      +++++||+||++.+.|...+..     .-++..++++++.+.++. +..+++.. |-|.+..-.+ ++.+..
T Consensus        80 ea~~~aDvvii~Vptp~~~~~~-----~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgtt~~l-~~~l~e  145 (446)
T 4a7p_A           80 EGVKDADAVFIAVGTPSRRGDG-----HADLSYVFAAAREIAENLTKPSVIVTKSTVPVGTGDEV-ERIIAE  145 (446)
T ss_dssp             HHHTTCSEEEECCCCCBCTTTC-----CBCTHHHHHHHHHHHHSCCSCCEEEECSCCCTTHHHHH-HHHHHH
T ss_pred             HHHhcCCEEEEEcCCCCccccC-----CccHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHH-HHHHHH
Confidence            8999999999998777643111     123445556666776665 55555554 4566554443 344443

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=97.95  E-value=4.1e-05  Score=68.76  Aligned_cols=77  Identities=25%  Similarity=0.350  Sum_probs=56.8

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      ..+||+|||+ |.+|+.++..|...+.  +|.++|.++.                           ++++||+||++.. 
T Consensus        18 ~~~~I~iiG~-G~mG~~la~~l~~~g~--~V~~~~~~~~---------------------------~~~~aD~vi~av~-   66 (209)
T 2raf_A           18 QGMEITIFGK-GNMGQAIGHNFEIAGH--EVTYYGSKDQ---------------------------ATTLGEIVIMAVP-   66 (209)
T ss_dssp             --CEEEEECC-SHHHHHHHHHHHHTTC--EEEEECTTCC---------------------------CSSCCSEEEECSC-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEcCCHH---------------------------HhccCCEEEEcCC-
Confidence            3579999998 9999999999999887  9999998642                           4679999999852 


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC
Q 017551           99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN  141 (369)
Q Consensus        99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~  141 (369)
                      +               ..++++++.+..+.++.+++.++|+.+
T Consensus        67 ~---------------~~~~~v~~~l~~~~~~~~vi~~~~g~~   94 (209)
T 2raf_A           67 Y---------------PALAALAKQYATQLKGKIVVDITNPLN   94 (209)
T ss_dssp             H---------------HHHHHHHHHTHHHHTTSEEEECCCCBC
T ss_pred             c---------------HHHHHHHHHHHHhcCCCEEEEECCCCC
Confidence            1               113344444544434778888999765

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=97.95  E-value=1.7e-05  Score=71.70  Aligned_cols=95  Identities=21%  Similarity=0.226  Sum_probs=64.8

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEE-EeCCCch--hHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEE
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHL-YDVVNTP--GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVI   93 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L-~D~~~~~--g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVi   93 (369)
                      ..+.|||+|||+ |.+|+.++..|...+.  ++.+ +|.+...  ....++.     ....    +++ .++++++|+||
T Consensus        20 ~m~mmkI~IIG~-G~mG~~la~~l~~~g~--~V~~v~~r~~~~~~~l~~~~g-----~~~~----~~~-~~~~~~aDvVi   86 (220)
T 4huj_A           20 FQSMTTYAIIGA-GAIGSALAERFTAAQI--PAIIANSRGPASLSSVTDRFG-----ASVK----AVE-LKDALQADVVI   86 (220)
T ss_dssp             GGGSCCEEEEEC-HHHHHHHHHHHHHTTC--CEEEECTTCGGGGHHHHHHHT-----TTEE----ECC-HHHHTTSSEEE
T ss_pred             hhcCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEECCCHHHHHHHHHHhC-----CCcc----cCh-HHHHhcCCEEE
Confidence            444679999998 9999999999999887  8888 9988632  2222221     1111    123 46789999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC
Q 017551           94 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN  141 (369)
Q Consensus        94 i~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~  141 (369)
                      ++.  |  +            ..+.++++.+.. .++.+++.++||.+
T Consensus        87 lav--p--~------------~~~~~v~~~l~~-~~~~ivi~~~~g~~  117 (220)
T 4huj_A           87 LAV--P--Y------------DSIADIVTQVSD-WGGQIVVDASNAID  117 (220)
T ss_dssp             EES--C--G------------GGHHHHHTTCSC-CTTCEEEECCCCBC
T ss_pred             EeC--C--h------------HHHHHHHHHhhc-cCCCEEEEcCCCCC
Confidence            985  2  1            223455555555 46778888899985

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=97.94  E-value=2.8e-05  Score=73.58  Aligned_cols=116  Identities=16%  Similarity=-0.017  Sum_probs=75.4

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC-CC---ChhhhcCC--CcEEE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QP---QLENALTG--MDLVI   93 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~-t~---dl~~al~~--ADiVi   93 (369)
                      .++|.|+||+|++|++++..|+..+.  +|+++|.+........+........+..+.+ -+   ++.+++++  .|+||
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   80 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGY--EVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVY   80 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEE
Confidence            46999999999999999999999887  9999998762211111221111123333221 12   23455665  59999


Q ss_pred             EcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           94 IPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        94 i~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      .+||.....  .......+..|+.....+++.+.+......++++|
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~S  126 (345)
T 2z1m_A           81 NLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQAS  126 (345)
T ss_dssp             ECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             ECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEe
Confidence            999865311  23456677889999999999888765434555554

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=97.94  E-value=2.6e-05  Score=73.35  Aligned_cols=106  Identities=17%  Similarity=0.120  Sum_probs=73.1

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  100 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p~  100 (369)
                      +||.|+||+|++|+.++..|...+.  +|+.++.+.....   +....   .+.......++.++++++|+||.+|+...
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~---~~~~~---~~~~Dl~~~~~~~~~~~~d~Vih~a~~~~   74 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGN--TPIILTRSIGNKA---INDYE---YRVSDYTLEDLINQLNDVDAVVHLAATRG   74 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCCC--------CCE---EEECCCCHHHHHHHTTTCSEEEECCCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCC--EEEEEeCCCCccc---CCceE---EEEccccHHHHHHhhcCCCEEEEccccCC
Confidence            6999999999999999999999987  9999998742111   22110   11110002346678899999999988654


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551          101 KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus       101 k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ..  ...+....|+...+.+++.+.+...+- ++++|
T Consensus        75 ~~--~~~~~~~~n~~~~~~ll~a~~~~~~~r-~v~~S  108 (311)
T 3m2p_A           75 SQ--GKISEFHDNEILTQNLYDACYENNISN-IVYAS  108 (311)
T ss_dssp             SS--SCGGGTHHHHHHHHHHHHHHHHTTCCE-EEEEE
T ss_pred             CC--ChHHHHHHHHHHHHHHHHHHHHcCCCE-EEEEc
Confidence            32  344556889999999999998876554 44443

>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*

Probab=97.92  E-value=1.3e-05  Score=85.04  Aligned_cols=101  Identities=19%  Similarity=0.195  Sum_probs=69.3

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc---hhH--HHH----hhcccC---------CCeEEEEeCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGV--TAD----ISHMDT---------GAVVRGFLGQP   80 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~---~g~--~~d----L~~~~~---------~~~v~~~~~t~   80 (369)
                      +.+||+|||+ |.||+.++..++..++  +|+++|++..   .+.  ..+    +.....         ..+++.   ++
T Consensus       313 ~i~kV~VIGa-G~MG~~iA~~la~aG~--~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~---~~  386 (715)
T 1wdk_A          313 DVKQAAVLGA-GIMGGGIAYQSASKGT--PILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRP---TL  386 (715)
T ss_dssp             CCSSEEEECC-HHHHHHHHHHHHHTTC--CEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEE---ES
T ss_pred             cCCEEEEECC-ChhhHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEE---EC
Confidence            3569999999 9999999999999998  9999999862   111  111    111100         113454   34


Q ss_pred             ChhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCC
Q 017551           81 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNS  142 (369)
Q Consensus        81 dl~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~  142 (369)
                      |+ +++++||+||++.              .++..+.+++...+.++++ +++  ++||-..+
T Consensus       387 d~-~~~~~aDlVIeaV--------------~e~~~vk~~v~~~l~~~~~~~~I--lasntStl  432 (715)
T 1wdk_A          387 SY-GDFGNVDLVVEAV--------------VENPKVKQAVLAEVENHVREDAI--LASNTSTI  432 (715)
T ss_dssp             SS-TTGGGCSEEEECC--------------CSCHHHHHHHHHHHHTTSCTTCE--EEECCSSS
T ss_pred             CH-HHHCCCCEEEEcC--------------CCCHHHHHHHHHHHHhhCCCCeE--EEeCCCCC
Confidence            66 7899999999985              2346667788888888885 553  36776554

>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A

Probab=97.91  E-value=3.9e-05  Score=77.38  Aligned_cols=129  Identities=17%  Similarity=0.173  Sum_probs=76.9

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHH-------------HhhcccCCCeEEEEeCCCChhhh
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA-------------DISHMDTGAVVRGFLGQPQLENA   85 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~-------------dL~~~~~~~~v~~~~~t~dl~~a   85 (369)
                      +.|||+|||+ |.||.+++..|+..+...+|+++|++..+....             ++........++.   ++|+.++
T Consensus         4 ~~mkI~VIG~-G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~---t~~~~e~   79 (467)
T 2q3e_A            4 EIKKICCIGA-GYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFF---STNIDDA   79 (467)
T ss_dssp             CCCEEEEECC-STTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE---ESCHHHH
T ss_pred             CccEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEE---ECCHHHH
Confidence            4579999999 999999999998873222999999986221111             0110000123443   3577788


Q ss_pred             cCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEe-cCCCCChhHHHHHHHHH
Q 017551           86 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLI-SNPVNSTVPIAAEVFKK  153 (369)
Q Consensus        86 l~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~-tNPv~~~t~i~ae~~~~  153 (369)
                      +++||+||++.+.|........+ -..++..+.+.++.+..+. |+.+|+.. |+|.+..-.+ ++.+.+
T Consensus        80 ~~~aDvViiaVptp~~~~~v~~~-~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l-~~~l~~  147 (467)
T 2q3e_A           80 IKEADLVFISVNTPTKTYGMGKG-RAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESI-RRIFDA  147 (467)
T ss_dssp             HHHCSEEEECCCCCBCCSSTTTT-TSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHH-HHHHHH
T ss_pred             HhcCCEEEEEcCCchhhcccccc-CCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHH-HHHHHH
Confidence            99999999997766532211000 0123344556666776665 45555554 6787764333 344444

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=97.91  E-value=3.1e-05  Score=78.81  Aligned_cols=106  Identities=17%  Similarity=0.087  Sum_probs=72.6

Q ss_pred             CC-CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           18 AA-GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        18 ~~-~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      .+ +|||.|+||+|++|+.++..|...+.  +|+.++.+.....           .+.... ...+.++++++|+||.+|
T Consensus       144 ~~k~m~VLVTGatG~IG~~l~~~L~~~G~--~V~~l~R~~~~~~-----------~v~~d~-~~~~~~~l~~~D~Vih~A  209 (516)
T 3oh8_A          144 DGSPLTVAITGSRGLVGRALTAQLQTGGH--EVIQLVRKEPKPG-----------KRFWDP-LNPASDLLDGADVLVHLA  209 (516)
T ss_dssp             CCCCCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESSSCCTT-----------CEECCT-TSCCTTTTTTCSEEEECC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCCCCcc-----------ceeecc-cchhHHhcCCCCEEEECC
Confidence            44 78999999999999999999999987  9999998763210           011111 122357889999999999


Q ss_pred             CCCCCC---CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           97 GVPRKP---GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        97 g~p~k~---g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      +.....   ......+...|+.....+++.+.+...-..+|++|
T Consensus       210 ~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~S  253 (516)
T 3oh8_A          210 GEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISAS  253 (516)
T ss_dssp             CC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEE
T ss_pred             CCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence            865321   12345677889999999999855443333455554

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.91  E-value=2.4e-05  Score=69.67  Aligned_cols=99  Identities=17%  Similarity=0.211  Sum_probs=63.3

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      |||+|+||+|.+|+.++..|...+.  +|.++|.+...  ....++.......++..    +++.++++++|+||++...
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~D~Vi~~~~~   74 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGH--EIVVGSRREEKAEAKAAEYRRIAGDASITG----MKNEDAAEACDIAVLTIPW   74 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTC--EEEEEESSHHHHHHHHHHHHHHHSSCCEEE----EEHHHHHHHCSEEEECSCH
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhccccccCCCCh----hhHHHHHhcCCEEEEeCCh
Confidence            6899999559999999999998887  99999987521  11111110000122331    3567889999999998521


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC
Q 017551           99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN  141 (369)
Q Consensus        99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~  141 (369)
                          .            ..+++.+.+....++.+++..+|+.+
T Consensus        75 ----~------------~~~~~~~~l~~~~~~~~vi~~~~g~~  101 (212)
T 1jay_A           75 ----E------------HAIDTARDLKNILREKIVVSPLVPVS  101 (212)
T ss_dssp             ----H------------HHHHHHHHTHHHHTTSEEEECCCCEE
T ss_pred             ----h------------hHHHHHHHHHHHcCCCEEEEcCCCcC
Confidence                1            12233344443335778888899775

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=97.91  E-value=4.2e-05  Score=73.28  Aligned_cols=111  Identities=10%  Similarity=0.087  Sum_probs=74.0

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCC-CCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcC-----CCcEEE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT-----GMDLVI   93 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~-~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~-----~ADiVi   93 (369)
                      .++|.|+||+|++|+.++..|+..+ .  +|+++|.+........+.......++.   ....+.++++     ++|+||
T Consensus        46 ~~~vlVtGatG~iG~~l~~~L~~~g~~--~V~~~~r~~~~~~~~~~~~~~~~~d~~---~~~~~~~~~~~~~~~~~d~Vi  120 (357)
T 2x6t_A           46 GRMIIVTGGAGFIGSNIVKALNDKGIT--DILVVDNLKDGTKFVNLVDLNIADYMD---KEDFLIQIMAGEEFGDVEAIF  120 (357)
T ss_dssp             --CEEEETTTSHHHHHHHHHHHHTTCC--CEEEEECCSSGGGGGGTTTSCCSEEEE---HHHHHHHHHTTCCCSSCCEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCc--EEEEEecCCCcchhhcccCceEeeecC---cHHHHHHHHhhcccCCCCEEE
Confidence            4789999999999999999999888 6  899999865221111121111111111   1223445565     599999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           94 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        94 i~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      .+||..........+.+..|+.....+++.+.+...  .++++|
T Consensus       121 h~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~--r~V~~S  162 (357)
T 2x6t_A          121 HEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI--PFLYAS  162 (357)
T ss_dssp             ECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC--CEEEEE
T ss_pred             ECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEc
Confidence            999865433345667788999999999999988765  455554

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=97.90  E-value=2.4e-05  Score=69.82  Aligned_cols=101  Identities=19%  Similarity=0.216  Sum_probs=69.2

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC-----CCChhhhcCCCcEEEEc
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-----QPQLENALTGMDLVIIP   95 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~-----t~dl~~al~~ADiVii~   95 (369)
                      |||.|+||+|++|+.++..|+..+.  +|++++.+....     ...   ..+..+.+     ..++.++++++|+||.+
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~-----~~~---~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~   70 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDY--QIYAGARKVEQV-----PQY---NNVKAVHFDVDWTPEEMAKQLHGMDAIINV   70 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSC--EEEEEESSGGGS-----CCC---TTEEEEECCTTSCHHHHHTTTTTCSEEEEC
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCccch-----hhc---CCceEEEecccCCHHHHHHHHcCCCEEEEC
Confidence            6999999999999999999999887  999999875211     110   22332211     12456788999999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 017551           96 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        96 ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      +|.....      .+..|+.....+++.+.+.... .++++|-
T Consensus        71 ag~~~~~------~~~~n~~~~~~l~~a~~~~~~~-~iv~~SS  106 (219)
T 3dqp_A           71 SGSGGKS------LLKVDLYGAVKLMQAAEKAEVK-RFILLST  106 (219)
T ss_dssp             CCCTTSS------CCCCCCHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred             CcCCCCC------cEeEeHHHHHHHHHHHHHhCCC-EEEEECc
Confidence            9876421      2345666677777777766543 4555543

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=97.90  E-value=5.5e-05  Score=71.70  Aligned_cols=115  Identities=14%  Similarity=0.078  Sum_probs=76.3

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeC----CCChhhhcC--CCc
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG----QPQLENALT--GMD   90 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~----t~dl~~al~--~AD   90 (369)
                      ..++|.|+||+|++|++++..|+..+.  +|+++|.+.  ......++.... ...+..+.+    ..++.++++  ++|
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGY--DVVIADNLVNSKREAIARIEKIT-GKTPAFHETDVSDERALARIFDAHPIT   80 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTC--EEEEECCCSSSCTHHHHHHHHHH-SCCCEEECCCTTCHHHHHHHHHHSCCC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCC--cEEEEecCCcchHHHHHHHHhhc-CCCceEEEeecCCHHHHHHHHhccCCc
Confidence            457999999999999999999999987  999999875  222222232211 122232211    123445666  899


Q ss_pred             EEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           91 LVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        91 iVii~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      +||..||.....  .....+.+..|+.....+++.+.+..... ++++|
T Consensus        81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-iv~~S  128 (341)
T 3enk_A           81 AAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKR-IVFSS  128 (341)
T ss_dssp             EEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCE-EEEEE
T ss_pred             EEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCE-EEEEe
Confidence            999999865311  12334667889999999999998876544 44443

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=97.90  E-value=2.7e-05  Score=74.85  Aligned_cols=116  Identities=16%  Similarity=0.141  Sum_probs=76.7

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHh--CCCCcEEEEEeCCCchhH-----HHHhhccc--CCCeEEEEeC-CC---Chhh
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKI--NPLVSVLHLYDVVNTPGV-----TADISHMD--TGAVVRGFLG-QP---QLEN   84 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~--~~~~~el~L~D~~~~~g~-----~~dL~~~~--~~~~v~~~~~-t~---dl~~   84 (369)
                      .+.++|.|+||+|++|+.++..|+.  .+.  +|+++|.......     ...+.+..  ....+..+.+ -+   ++.+
T Consensus         8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~   85 (362)
T 3sxp_A            8 LENQTILITGGAGFVGSNLAFHFQENHPKA--KVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRR   85 (362)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHCTTS--EEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHhhCCCC--eEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHH
Confidence            3457999999999999999999998  777  9999998542000     00000000  1122232221 12   2444


Q ss_pred             h-cCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           85 A-LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        85 a-l~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      + ..++|+||.+||............+..|+.....+++.+.+....  +|++|
T Consensus        86 ~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~--~V~~S  137 (362)
T 3sxp_A           86 LEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK--VIYAS  137 (362)
T ss_dssp             HTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE--EEEEE
T ss_pred             hhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc--EEEeC
Confidence            5 689999999998654334556778899999999999999877644  44444

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=97.86  E-value=7.3e-05  Score=69.67  Aligned_cols=109  Identities=10%  Similarity=0.098  Sum_probs=74.3

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCC-CCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCC-----CcEEEEc
Q 017551           22 KVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTG-----MDLVIIP   95 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~-~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~-----ADiVii~   95 (369)
                      ||.|+||+|++|++++..|...+ .  +|+++|.........++.......++.   ....+.+++++     +|+||.+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~--~V~~~~r~~~~~~~~~~~~~~~~~d~~---~~~~~~~~~~~~~~~~~d~vi~~   75 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGIT--DILVVDNLKDGTKFVNLVDLNIADYMD---KEDFLIQIMAGEEFGDVEAIFHE   75 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCC--CEEEEECCSSGGGGHHHHTSCCSEEEE---HHHHHHHHHTTCCCSSCCEEEEC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCc--EEEEEccCCCCchhhhcCcceeccccc---cHHHHHHHHhccccCCCcEEEEC
Confidence            58999999999999999999888 5  899999875221111222211111221   12334556664     9999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           96 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        96 ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      |+............+..|+.....+++.+.+...  .++++|
T Consensus        76 a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~--~~v~~S  115 (310)
T 1eq2_A           76 GACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI--PFLYAS  115 (310)
T ss_dssp             CSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC--CEEEEE
T ss_pred             cccccCcccCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Confidence            9865433345667788999999999999988765  455554

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=97.85  E-value=0.00012  Score=68.38  Aligned_cols=107  Identities=17%  Similarity=0.113  Sum_probs=73.1

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC---CCChhhhcCCCcEEEEcCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG---QPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~---t~dl~~al~~ADiVii~ag   97 (369)
                      |||.|+||+|++|++++..|+..+.  +|+.+|.+.....  ++.+    ..+....+   ..++.+++++ |+||.+|+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~--~~~~----~~~~~~~~Dl~d~~~~~~~~~-d~vih~A~   71 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGY--EVVVVDNLSSGRR--EFVN----PSAELHVRDLKDYSWGAGIKG-DVVFHFAA   71 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEECCCSSCCG--GGSC----TTSEEECCCTTSTTTTTTCCC-SEEEECCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCC--EEEEEeCCCCCch--hhcC----CCceEEECccccHHHHhhcCC-CEEEECCC
Confidence            6899999999999999999999987  9999998652111  0111    11221110   1125566777 99999998


Q ss_pred             CCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           98 VPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        98 ~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      .+...  .......+..|+.....+++.+.+....- ++++|
T Consensus        72 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~-iv~~S  112 (312)
T 3ko8_A           72 NPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRT-VVFAS  112 (312)
T ss_dssp             SCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCE-EEEEE
T ss_pred             CCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCE-EEEeC
Confidence            65322  23456677889999999999998876544 44443

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=97.85  E-value=0.00011  Score=69.82  Aligned_cols=113  Identities=14%  Similarity=0.049  Sum_probs=75.2

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      +.+||.|+||+|++|+.++..|...+.  +|+++|.+..... ..+.+......+....+. -...++.++|+||.+|+.
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~D-~~~~~~~~~d~vih~A~~  101 (343)
T 2b69_A           26 DRKRILITGGAGFVGSHLTDKLMMDGH--EVTVVDNFFTGRK-RNVEHWIGHENFELINHD-VVEPLYIEVDQIYHLASP  101 (343)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSSCCG-GGTGGGTTCTTEEEEECC-TTSCCCCCCSEEEECCSC
T ss_pred             CCCEEEEEcCccHHHHHHHHHHHHCCC--EEEEEeCCCccch-hhhhhhccCCceEEEeCc-cCChhhcCCCEEEECccc
Confidence            457999999999999999999999887  9999998641100 111111112344443321 112467899999999886


Q ss_pred             CCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           99 PRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        99 p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ....  .......+..|+.....+++.+.+...  .++++|
T Consensus       102 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~--~~v~~S  140 (343)
T 2b69_A          102 ASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--RLLLAS  140 (343)
T ss_dssp             CSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC--EEEEEE
T ss_pred             cCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC--cEEEEC
Confidence            4321  123456678899999999999988754  455554

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=97.82  E-value=3.6e-05  Score=74.11  Aligned_cols=111  Identities=16%  Similarity=0.142  Sum_probs=75.8

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhC-CCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC-C----CChhhhcCCCcEE
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-Q----PQLENALTGMDLV   92 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~-~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~-t----~dl~~al~~ADiV   92 (369)
                      ..+||.|+||+|++|+.++..|... +.  +|+.+|.+....  .++..   ...++.+.+ -    .++.++++++|+|
T Consensus        23 ~~~~vlVtGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~--~~~~~---~~~v~~~~~Dl~~d~~~~~~~~~~~d~V   95 (372)
T 3slg_A           23 KAKKVLILGVNGFIGHHLSKRILETTDW--EVFGMDMQTDRL--GDLVK---HERMHFFEGDITINKEWVEYHVKKCDVI   95 (372)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHSSC--EEEEEESCCTTT--GGGGG---STTEEEEECCTTTCHHHHHHHHHHCSEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCC--EEEEEeCChhhh--hhhcc---CCCeEEEeCccCCCHHHHHHHhccCCEE
Confidence            4579999999999999999999887 77  999999875211  11111   123333321 1    2245678899999


Q ss_pred             EEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 017551           93 IIPAGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        93 ii~ag~p~k~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      |.+|+......  ....+.+..|+.....+++.+.+..  ..+|++|.
T Consensus        96 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~v~~SS  141 (372)
T 3slg_A           96 LPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPST  141 (372)
T ss_dssp             EECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT--CEEEEECC
T ss_pred             EEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC--CcEEEeCc
Confidence            99988653211  2345667888888889999998887  45666653

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=97.82  E-value=8.2e-05  Score=71.12  Aligned_cols=66  Identities=20%  Similarity=0.284  Sum_probs=50.5

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      +.+||+|||+ |.+|+.++..|+..+.  +|++||++..+  +..+...    .+..   ++++.+++++||+||++.
T Consensus        30 ~~~~I~iIG~-G~mG~~~a~~l~~~G~--~V~~~dr~~~~--~~~l~~~----g~~~---~~~~~e~~~~aDvVi~~v   95 (320)
T 4dll_A           30 YARKITFLGT-GSMGLPMARRLCEAGY--ALQVWNRTPAR--AASLAAL----GATI---HEQARAAARDADIVVSML   95 (320)
T ss_dssp             CCSEEEEECC-TTTHHHHHHHHHHTTC--EEEEECSCHHH--HHHHHTT----TCEE---ESSHHHHHTTCSEEEECC
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHhCCC--eEEEEcCCHHH--HHHHHHC----CCEe---eCCHHHHHhcCCEEEEEC
Confidence            4579999999 9999999999999988  99999998622  2223322    1232   256788999999999985

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=97.80  E-value=9.5e-05  Score=69.05  Aligned_cols=99  Identities=17%  Similarity=0.173  Sum_probs=68.1

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  100 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p~  100 (369)
                      |||.|+||+|+||++++..|..+|+  +|+.+..+...            ..+...  ..+ .++++++|.||..++.+-
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~--~V~~l~R~~~~------------~~~~~~--~~~-~~~l~~~d~vihla~~~i   63 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGH--EVTLVSRKPGP------------GRITWD--ELA-ASGLPSCDAAVNLAGENI   63 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCCT------------TEEEHH--HHH-HHCCCSCSEEEECCCCCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCCCc------------Ceeecc--hhh-HhhccCCCEEEEeccCcc
Confidence            8999999999999999999999998  99988775421            111110  111 367899999999987532


Q ss_pred             CC-----CC-CHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEe
Q 017551          101 KP-----GM-TRDDLFNINAGIVRTLCEGIAKCCP-NATVNLI  136 (369)
Q Consensus       101 k~-----g~-~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~  136 (369)
                      -.     .. ...++...|+...+.+.+.+.+... ..+++..
T Consensus        64 ~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~  106 (298)
T 4b4o_A           64 LNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLV  106 (298)
T ss_dssp             SCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEE
T ss_pred             cchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEE
Confidence            11     11 1345667788888888888877653 3334433

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=97.80  E-value=5e-05  Score=67.79  Aligned_cols=96  Identities=22%  Similarity=0.235  Sum_probs=63.9

Q ss_pred             EEEEEcCCCccHHHHHHHHH-hCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC----CCChhhhcCCCcEEEEcC
Q 017551           22 KVAILGAAGGIGQPLAMLMK-INPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG----QPQLENALTGMDLVIIPA   96 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~-~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~----t~dl~~al~~ADiVii~a   96 (369)
                      +|.|+||+|++|+.++..|+ ..+.  +|++++.+... ...++...  ...+..+.+    ..++.++++++|+||..+
T Consensus         7 ~vlVtGasg~iG~~~~~~l~~~~g~--~V~~~~r~~~~-~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~a   81 (221)
T 3r6d_A            7 YITILGAAGQIAQXLTATLLTYTDM--HITLYGRQLKT-RIPPEIID--HERVTVIEGSFQNPGXLEQAVTNAEVVFVGA   81 (221)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCCC--EEEEEESSHHH-HSCHHHHT--STTEEEEECCTTCHHHHHHHHTTCSEEEESC
T ss_pred             EEEEEeCCcHHHHHHHHHHHhcCCc--eEEEEecCccc-cchhhccC--CCceEEEECCCCCHHHHHHHHcCCCEEEEcC
Confidence            49999999999999999999 7887  99999987430 11122111  123333221    134557889999999998


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      |.+             |.. .+.+++.+.+....- +|++|
T Consensus        82 g~~-------------n~~-~~~~~~~~~~~~~~~-iv~iS  107 (221)
T 3r6d_A           82 MES-------------GSD-MASIVKALSRXNIRR-VIGVS  107 (221)
T ss_dssp             CCC-------------HHH-HHHHHHHHHHTTCCE-EEEEE
T ss_pred             CCC-------------Chh-HHHHHHHHHhcCCCe-EEEEe
Confidence            754             344 777888887765444 44443

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=97.79  E-value=8.1e-05  Score=70.52  Aligned_cols=116  Identities=18%  Similarity=0.167  Sum_probs=73.0

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhC-CCC---cEEEEEeCCCchhHHHHhhcccCCCeEEEEeC-CC---ChhhhcCCCcEE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKIN-PLV---SVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QP---QLENALTGMDLV   92 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~-~~~---~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~-t~---dl~~al~~ADiV   92 (369)
                      |||.|+||+|++|++++..|+.. +..   .+|+++|.....+....+........+..+.+ -+   ++.+++.++|+|
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   80 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhcCCCEE
Confidence            68999999999999999999885 222   39999997541110011111111123443321 12   345677899999


Q ss_pred             EEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           93 IIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        93 ii~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      |.+||.....  .......+..|+.....+++.+.+.... .++++|
T Consensus        81 ih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~-~~v~~S  126 (337)
T 1r6d_A           81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVG-RVVHVS  126 (337)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCC-EEEEEE
T ss_pred             EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEec
Confidence            9999864311  0123456788999999999999887543 455444

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=97.79  E-value=7.1e-05  Score=72.62  Aligned_cols=110  Identities=17%  Similarity=0.020  Sum_probs=75.9

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC----CCChhhhcCCCcEEEE
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG----QPQLENALTGMDLVII   94 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~----t~dl~~al~~ADiVii   94 (369)
                      +.++|.|+||+|++|++++..|+..+.  +|+++|.+......  +..    ..+..+.+    ..++.++++++|+||.
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~--~~~----~~v~~~~~Dl~d~~~~~~~~~~~d~Vih   99 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGH--YVIASDWKKNEHMT--EDM----FCDEFHLVDLRVMENCLKVTEGVDHVFN   99 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCCSSSC--GGG----TCSEEEECCTTSHHHHHHHHTTCSEEEE
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCC--eEEEEECCCccchh--hcc----CCceEEECCCCCHHHHHHHhCCCCEEEE
Confidence            457999999999999999999999887  99999987521110  111    12222211    1235577899999999


Q ss_pred             cCCCCCCC---CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           95 PAGVPRKP---GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        95 ~ag~p~k~---g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      +|+.....   .....+.+..|+.....+++.+.+....- ++++|
T Consensus       100 ~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~-~V~~S  144 (379)
T 2c5a_A          100 LAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKR-FFYAS  144 (379)
T ss_dssp             CCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSE-EEEEE
T ss_pred             CceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCE-EEEEe
Confidence            99865321   23456677889999999999998765444 44443

>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}

Probab=97.78  E-value=9.4e-05  Score=70.57  Aligned_cols=123  Identities=15%  Similarity=0.138  Sum_probs=74.2

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHH-hhccc-CCCeEEE--EeCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTAD-ISHMD-TGAVVRG--FLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~d-L~~~~-~~~~v~~--~~~t~dl~~al~~ADiVii~a   96 (369)
                      |||+|||+ |.+|+.++..|...+.  +|.++|.+........ +.-.. .......  ...+++.+++.+++|+||++.
T Consensus         3 mkI~IiGa-GaiG~~~a~~L~~~g~--~V~~~~r~~~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVilav   79 (320)
T 3i83_A            3 LNILVIGT-GAIGSFYGALLAKTGH--CVSVVSRSDYETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLCI   79 (320)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHTTC--EEEEECSTTHHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEECC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCC--eEEEEeCChHHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEec
Confidence            79999999 9999999999999887  9999999762111110 10000 1122221  001245555556999999985


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEE-echhc
Q 017551           97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG-VTMLD  169 (369)
Q Consensus        97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG-~t~Ld  169 (369)
                      -.    ..            ..++++.+..+. |+..|+.+.|-++..-.     +.+.  +|.++|++ ++...
T Consensus        80 K~----~~------------~~~~l~~l~~~l~~~t~Iv~~~nGi~~~~~-----l~~~--~~~~~vl~g~~~~~  131 (320)
T 3i83_A           80 KV----VE------------GADRVGLLRDAVAPDTGIVLISNGIDIEPE-----VAAA--FPDNEVISGLAFIG  131 (320)
T ss_dssp             CC----CT------------TCCHHHHHTTSCCTTCEEEEECSSSSCSHH-----HHHH--STTSCEEEEEEEEE
T ss_pred             CC----CC------------hHHHHHHHHhhcCCCCEEEEeCCCCChHHH-----HHHH--CCCCcEEEEEEEec
Confidence            21    11            113344555443 67788888998876532     2333  56667764 46543

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=97.78  E-value=3.2e-05  Score=72.76  Aligned_cols=108  Identities=13%  Similarity=0.096  Sum_probs=73.5

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC-C---CChhhhcCC--CcE
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-Q---PQLENALTG--MDL   91 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~-t---~dl~~al~~--ADi   91 (369)
                      ++.++|.|+||+|++|+.++..|+..+.  +|+++|.+.....   +       .+..+.+ -   .++.+++++  .|+
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~--~V~~~~r~~~~~~---l-------~~~~~~~Dl~d~~~~~~~~~~~~~d~   77 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNV--EVFGTSRNNEAKL---P-------NVEMISLDIMDSQRVKKVISDIKPDY   77 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCTTCCC---T-------TEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCC--EEEEEecCCcccc---c-------eeeEEECCCCCHHHHHHHHHhcCCCE
Confidence            4567999999999999999999999887  9999998752210   1       2222211 1   234456665  899


Q ss_pred             EEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           92 VIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        92 Vii~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ||.+||.....  .......+..|+.....+++.+.+......+|++|
T Consensus        78 vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~S  125 (321)
T 2pk3_A           78 IFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIG  125 (321)
T ss_dssp             EEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEE
T ss_pred             EEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEc
Confidence            99999864311  12456678889999999999997664345566554

>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}

Probab=97.77  E-value=5.7e-05  Score=69.49  Aligned_cols=92  Identities=16%  Similarity=0.244  Sum_probs=66.2

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCC--cEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLV--SVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~--~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      +.|||+|||+ |.+|+.++..|...+..  .+|.++|.+...       .     .+..   ++++.+++++||+||++.
T Consensus         3 ~~m~i~iiG~-G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~-------~-----g~~~---~~~~~~~~~~~D~vi~~v   66 (262)
T 2rcy_A            3 ENIKLGFMGL-GQMGSALAHGIANANIIKKENLFYYGPSKKN-------T-----TLNY---MSSNEELARHCDIIVCAV   66 (262)
T ss_dssp             SSSCEEEECC-SHHHHHHHHHHHHHTSSCGGGEEEECSSCCS-------S-----SSEE---CSCHHHHHHHCSEEEECS
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCCCCCCeEEEEeCCccc-------C-----ceEE---eCCHHHHHhcCCEEEEEe
Confidence            3579999999 99999999999887721  389999987633       1     1222   345678889999999985


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCC
Q 017551           97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS  142 (369)
Q Consensus        97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~  142 (369)
                      . |   .            .+.++.+.+..+.++..++..+|.++.
T Consensus        67 ~-~---~------------~~~~v~~~l~~~l~~~~vv~~~~gi~~   96 (262)
T 2rcy_A           67 K-P---D------------IAGSVLNNIKPYLSSKLLISICGGLNI   96 (262)
T ss_dssp             C-T---T------------THHHHHHHSGGGCTTCEEEECCSSCCH
T ss_pred             C-H---H------------HHHHHHHHHHHhcCCCEEEEECCCCCH
Confidence            2 1   1            134555667666677878888888765

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=97.77  E-value=9.5e-05  Score=67.87  Aligned_cols=100  Identities=16%  Similarity=0.159  Sum_probs=63.7

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhH------------HHHhhcccCCCeEEEEeCCCChhh
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV------------TADISHMDTGAVVRGFLGQPQLEN   84 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~------------~~dL~~~~~~~~v~~~~~t~dl~~   84 (369)
                      ....+||+|||+ |.+|++++..|+..+.  +|.++|++.....            ..++....  .....    +++.+
T Consensus        16 ~~~~~kIgiIG~-G~mG~alA~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~e   86 (245)
T 3dtt_A           16 YFQGMKIAVLGT-GTVGRTMAGALADLGH--EVTIGTRDPKATLARAEPDAMGAPPFSQWLPEH--PHVHL----AAFAD   86 (245)
T ss_dssp             ---CCEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESCHHHHHTCC-------CCHHHHGGGS--TTCEE----EEHHH
T ss_pred             ccCCCeEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCChhhhhhhhhhhhhcchhhhHHHhhc--Cceec----cCHHH
Confidence            344689999999 9999999999999987  9999999763200            22222211  11221    34578


Q ss_pred             hcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 017551           85 ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  140 (369)
Q Consensus        85 al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv  140 (369)
                      ++++||+||++...+            .-.+++.++.   ....++.+++.++||.
T Consensus        87 ~~~~aDvVilavp~~------------~~~~~~~~i~---~~~l~g~ivi~~s~~~  127 (245)
T 3dtt_A           87 VAAGAELVVNATEGA------------SSIAALTAAG---AENLAGKILVDIANPL  127 (245)
T ss_dssp             HHHHCSEEEECSCGG------------GHHHHHHHHC---HHHHTTSEEEECCCCE
T ss_pred             HHhcCCEEEEccCcH------------HHHHHHHHhh---hhhcCCCEEEECCCCC
Confidence            899999999984211            1112333331   2222788899999986

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=97.77  E-value=6.1e-05  Score=72.02  Aligned_cols=115  Identities=17%  Similarity=0.070  Sum_probs=73.2

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhC-CCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC-CC---ChhhhcC--CCcEEE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QP---QLENALT--GMDLVI   93 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~-~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~-t~---dl~~al~--~ADiVi   93 (369)
                      |||.|+||+|++|+.++..|+.. +.  +|+++|.+........+.+......+..+.+ -+   ++.++++  ++|+||
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   78 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQD--TVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVM   78 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSC--EEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCC--eEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEE
Confidence            68999999999999999988886 56  8999997541110011111111233443321 12   2445666  899999


Q ss_pred             EcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhh--CCC------eEEEEec
Q 017551           94 IPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKC--CPN------ATVNLIS  137 (369)
Q Consensus        94 i~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~--~p~------a~viv~t  137 (369)
                      .+||.....  .......+..|+.....+++.+.+.  .-+      +.+|++|
T Consensus        79 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~S  132 (361)
T 1kew_A           79 HLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHIS  132 (361)
T ss_dssp             ECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEE
T ss_pred             ECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeC
Confidence            999865310  1123456788999999999988877  433      3566654

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=97.76  E-value=8.7e-05  Score=68.50  Aligned_cols=103  Identities=16%  Similarity=0.162  Sum_probs=74.5

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe----CCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL----GQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~----~t~dl~~al~~ADiVii~a   96 (369)
                      ++|.|+||+|++|+.++..|+..+.  +|++.|.+.....         ...+..+.    ...++.+++++.|+||..|
T Consensus         4 k~vlVTGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~A   72 (267)
T 3rft_A            4 KRLLVTGAAGQLGRVMRERLAPMAE--ILRLADLSPLDPA---------GPNEECVQCDLADANAVNAMVAGCDGIVHLG   72 (267)
T ss_dssp             EEEEEESTTSHHHHHHHHHTGGGEE--EEEEEESSCCCCC---------CTTEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCC--EEEEEecCCcccc---------CCCCEEEEcCCCCHHHHHHHHcCCCEEEECC
Confidence            4799999999999999999998886  8999998762211         11222221    1123557789999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      |...  .......+..|+.....+.+.+.+....- ||++|
T Consensus        73 g~~~--~~~~~~~~~~N~~g~~~l~~a~~~~~~~~-iv~~S  110 (267)
T 3rft_A           73 GISV--EKPFEQILQGNIIGLYNLYEAARAHGQPR-IVFAS  110 (267)
T ss_dssp             SCCS--CCCHHHHHHHHTHHHHHHHHHHHHTTCCE-EEEEE
T ss_pred             CCcC--cCCHHHHHHHHHHHHHHHHHHHHHcCCCE-EEEEc
Confidence            8742  23456778899999999999998775444 55543

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=97.75  E-value=0.00014  Score=69.46  Aligned_cols=116  Identities=16%  Similarity=0.028  Sum_probs=75.9

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccC---CCeEEEEeC-C---CChhhhcCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDT---GAVVRGFLG-Q---PQLENALTGM   89 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~---~~~v~~~~~-t---~dl~~al~~A   89 (369)
                      +.+||.|+||+|++|+.++..|+..+.  +|+++|.+..  .....++.....   ...+..+.+ -   .++.++++++
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~  103 (352)
T 1sb8_A           26 QPKVWLITGVAGFIGSNLLETLLKLDQ--KVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGV  103 (352)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTC
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCC
Confidence            357999999999999999999999887  9999998652  111112211000   123333221 1   2355678999


Q ss_pred             cEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           90 DLVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        90 DiVii~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      |+||.+||....+  .......+..|+.....+++.+.+....- ++++|
T Consensus       104 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~-~v~~S  152 (352)
T 1sb8_A          104 DYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQS-FTYAA  152 (352)
T ss_dssp             SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSE-EEEEE
T ss_pred             CEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCE-EEEec
Confidence            9999999864311  12345667889999999999988764443 45444

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=97.74  E-value=7.9e-05  Score=70.82  Aligned_cols=115  Identities=17%  Similarity=0.113  Sum_probs=74.4

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC-C---CChhhhcCCCcEEEEc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-Q---PQLENALTGMDLVIIP   95 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~-t---~dl~~al~~ADiVii~   95 (369)
                      +++|.|+||+|++|++++..|+..+...+|+++|.+...+....+.... ...+..+.+ -   .++.++++++|+||.+
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   82 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAIL-GDRVELVVGDIADAELVDKLAAKADAIVHY   82 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGC-SSSEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhc-cCCeEEEECCCCCHHHHHHHhhcCCEEEEC
Confidence            4699999999999999999998873223999999864111101111111 123443321 1   2345778999999999


Q ss_pred             CCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           96 AGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        96 ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ||.....  .......+..|+.....+++.+.+...  .++++|
T Consensus        83 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~--~~v~~S  124 (348)
T 1oc2_A           83 AAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI--RFHHVS  124 (348)
T ss_dssp             CSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC--EEEEEE
T ss_pred             CcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC--eEEEec
Confidence            9865311  012345678899999999999988753  555554

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=97.74  E-value=4.1e-05  Score=69.04  Aligned_cols=113  Identities=19%  Similarity=0.098  Sum_probs=73.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEE-eCCCChhhhcCCCcEEEEcCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~-~~t~dl~~al~~ADiVii~ag~   98 (369)
                      .++|.|+||+|++|+.++..|+..+...+|+++|.+............   ..+... +...++.++++++|+||..+|.
T Consensus        18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~---~~~~~D~~d~~~~~~~~~~~d~vi~~ag~   94 (242)
T 2bka_A           18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNV---NQEVVDFEKLDDYASAFQGHDVGFCCLGT   94 (242)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGC---EEEECCGGGGGGGGGGGSSCSEEEECCCC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCc---eEEecCcCCHHHHHHHhcCCCEEEECCCc
Confidence            469999999999999999999988865689999987621100000000   011111 1124566788999999999986


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ... +....+++..|+.....+++.+.+.... .++++|
T Consensus        95 ~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~iv~~S  131 (242)
T 2bka_A           95 TRG-KAGAEGFVRVDRDYVLKSAELAKAGGCK-HFNLLS  131 (242)
T ss_dssp             CHH-HHHHHHHHHHHTHHHHHHHHHHHHTTCC-EEEEEC
T ss_pred             ccc-cCCcccceeeeHHHHHHHHHHHHHCCCC-EEEEEc
Confidence            421 1123456677888888888888776543 455554

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=97.74  E-value=5.8e-05  Score=70.84  Aligned_cols=103  Identities=14%  Similarity=0.078  Sum_probs=57.6

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCC--CcEEEEcCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTG--MDLVIIPAGV   98 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~--ADiVii~ag~   98 (369)
                      +||.|+||+|++|++++..|+..+.  +|+++|.+....   .    ....++.   ...++.+++++  +|+||.+||.
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~---~----~~~~Dl~---d~~~~~~~~~~~~~d~vih~A~~   70 (315)
T 2ydy_A            3 RRVLVTGATGLLGRAVHKEFQQNNW--HAVGCGFRRARP---K----FEQVNLL---DSNAVHHIIHDFQPHVIVHCAAE   70 (315)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTC--EEEEEC----------------------------CHHHHHHHCCSEEEECC--
T ss_pred             CeEEEECCCcHHHHHHHHHHHhCCC--eEEEEccCCCCC---C----eEEecCC---CHHHHHHHHHhhCCCEEEECCcc
Confidence            6899999999999999999999886  999999754220   0    0011221   12345566764  8999999986


Q ss_pred             CCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           99 PRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        99 p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ....  .......+..|+.....+++.+.+...  .++++|
T Consensus        71 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~--~~v~~S  109 (315)
T 2ydy_A           71 RRPDVVENQPDAASQLNVDASGNLAKEAAAVGA--FLIYIS  109 (315)
T ss_dssp             -----------------CHHHHHHHHHHHHHTC--EEEEEE
T ss_pred             cChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEc
Confidence            4321  123445667888889999998887653  555554

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=97.73  E-value=0.00015  Score=68.63  Aligned_cols=109  Identities=15%  Similarity=0.085  Sum_probs=73.1

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhC-CCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC-CC----ChhhhcCCCcEEEE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QP----QLENALTGMDLVII   94 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~-~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~-t~----dl~~al~~ADiVii   94 (369)
                      |||.|+||+|++|++++..|+.. +.  +|+++|.+....  .++..   ...+..+.+ -+    .+.++++++|+||.
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~--~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~d~vih   73 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHY--EVYGLDIGSDAI--SRFLN---HPHFHFVEGDISIHSEWIEYHVKKCDVVLP   73 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTC--EEEEEESCCGGG--GGGTT---CTTEEEEECCTTTCSHHHHHHHHHCSEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCC--EEEEEeCCcchH--HHhhc---CCCeEEEeccccCcHHHHHhhccCCCEEEE
Confidence            58999999999999999999987 66  899999875221  11111   123333221 11    24557789999999


Q ss_pred             cCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 017551           95 PAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        95 ~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      +||.....  .....+.+..|+.....+++.+.+..  ..++++|.
T Consensus        74 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~v~~SS  117 (345)
T 2bll_A           74 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPST  117 (345)
T ss_dssp             CBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECC
T ss_pred             cccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEec
Confidence            98864311  12344567788888888888888765  45666653

>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*

Probab=97.73  E-value=0.00015  Score=69.27  Aligned_cols=121  Identities=13%  Similarity=0.168  Sum_probs=74.6

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCC--cEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEE
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLV--SVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVII   94 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~--~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii   94 (369)
                      ..+.|||+|||+ |.+|+.++..|...+..  .+|.++|.+........+...  .  +..   +++..+++++||+||+
T Consensus        19 ~~~~mkI~iIG~-G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~--G--~~~---~~~~~e~~~~aDvVil   90 (322)
T 2izz_A           19 YFQSMSVGFIGA-GQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKM--G--VKL---TPHNKETVQHSDVLFL   90 (322)
T ss_dssp             ---CCCEEEESC-SHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHH--T--CEE---ESCHHHHHHHCSEEEE
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHc--C--CEE---eCChHHHhccCCEEEE
Confidence            445689999999 99999999999988731  389999987531122223221  1  222   2356688899999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe
Q 017551           95 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  165 (369)
Q Consensus        95 ~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~  165 (369)
                      +.. |   .            .+.++++.+..+. |+.+|+.++|.+..- . +.+.+.+.  ++..++++.
T Consensus        91 av~-~---~------------~~~~vl~~l~~~l~~~~ivvs~s~gi~~~-~-l~~~l~~~--~~~~~vv~~  142 (322)
T 2izz_A           91 AVK-P---H------------IIPFILDEIGADIEDRHIVVSCAAGVTIS-S-IEKKLSAF--RPAPRVIRC  142 (322)
T ss_dssp             CSC-G---G------------GHHHHHHHHGGGCCTTCEEEECCTTCCHH-H-HHHHHHTT--SSCCEEEEE
T ss_pred             EeC-H---H------------HHHHHHHHHHhhcCCCCEEEEeCCCCCHH-H-HHHHHhhc--CCCCeEEEE
Confidence            852 1   1            2445555666554 677788888887642 2 23333322  344567655

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=97.72  E-value=5.9e-05  Score=72.59  Aligned_cols=115  Identities=17%  Similarity=0.193  Sum_probs=78.3

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhC-CCCcEEEEEeCCCch--hHHHHhhcccCCCeEEEEeC-C---CChhhhcCCC
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLG-Q---PQLENALTGM   89 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~-~~~~el~L~D~~~~~--g~~~dL~~~~~~~~v~~~~~-t---~dl~~al~~A   89 (369)
                      ..+.++|.|+||+|++|+.++..|+.. +. .+|+++|.+...  ....++..    ..+..+.+ -   .++.++++++
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~-~~V~~~~r~~~~~~~~~~~~~~----~~v~~~~~Dl~d~~~l~~~~~~~   92 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNA-KKIIVYSRDELKQSEMAMEFND----PRMRFFIGDVRDLERLNYALEGV   92 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCC-SEEEEEESCHHHHHHHHHHHCC----TTEEEEECCTTCHHHHHHHTTTC
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCC-CEEEEEECChhhHHHHHHHhcC----CCEEEEECCCCCHHHHHHHHhcC
Confidence            344579999999999999999988887 52 389999997622  12222221    23443321 1   2345778999


Q ss_pred             cEEEEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           90 DLVIIPAGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        90 DiVii~ag~p~k~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      |+||.+||....+.  ....+.+..|+.....+++.+.+....- ++++|
T Consensus        93 D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~-~V~~S  141 (344)
T 2gn4_A           93 DICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQ-VIALS  141 (344)
T ss_dssp             SEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSE-EEEEC
T ss_pred             CEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCE-EEEec
Confidence            99999998754221  2345678889999999999998775444 44444

>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*

Probab=97.72  E-value=0.00011  Score=70.77  Aligned_cols=102  Identities=20%  Similarity=0.278  Sum_probs=67.5

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCC-----CcEEEEEeCCCc-----hhHHHHhhccc--------CCCeEEEEeCCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPL-----VSVLHLYDVVNT-----PGVTADISHMD--------TGAVVRGFLGQPQ   81 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~-----~~el~L~D~~~~-----~g~~~dL~~~~--------~~~~v~~~~~t~d   81 (369)
                      .|||+|||+ |.+|+.++..|+..+.     ..+|.++|.++.     ......-.+..        ....+..   +++
T Consensus         8 ~mkI~iIG~-G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---~~~   83 (354)
T 1x0v_A            8 SKKVCIVGS-GNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVA---VPD   83 (354)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEE---ESS
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEE---EcC
Confidence            469999999 9999999999988761     028999999764     33222111110        0123443   356


Q ss_pred             hhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCC
Q 017551           82 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVN  141 (369)
Q Consensus        82 l~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~  141 (369)
                      +.+++++||+||++.  |  +            ..+.++.+.+..+. |+.+++..+|-.+
T Consensus        84 ~~~~~~~aD~Vilav--~--~------------~~~~~v~~~i~~~l~~~~ivv~~~~Gi~  128 (354)
T 1x0v_A           84 VVQAAEDADILIFVV--P--H------------QFIGKICDQLKGHLKANATGISLIKGVD  128 (354)
T ss_dssp             HHHHHTTCSEEEECC--C--G------------GGHHHHHHHHTTCSCTTCEEEECCCCBC
T ss_pred             HHHHHcCCCEEEEeC--C--H------------HHHHHHHHHHHhhCCCCCEEEEECCccC
Confidence            778899999999985  2  1            12455666777665 5778888888554

>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}

Probab=97.72  E-value=0.00012  Score=71.49  Aligned_cols=100  Identities=14%  Similarity=0.200  Sum_probs=67.3

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCC-------CCcEEEEEeCCCc-----hhHHHHhhccc--------CCCeEEEEeCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINP-------LVSVLHLYDVVNT-----PGVTADISHMD--------TGAVVRGFLGQP   80 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~-------~~~el~L~D~~~~-----~g~~~dL~~~~--------~~~~v~~~~~t~   80 (369)
                      +||+|||+ |.+|+.++..|+..+       .  +|.++|.++.     ......-.+..        ....+..   ++
T Consensus        22 ~kI~iIGa-G~mG~alA~~L~~~G~~~~~~~~--~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~---~~   95 (375)
T 1yj8_A           22 LKISILGS-GNWASAISKVVGTNAKNNYLFEN--EVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVA---HS   95 (375)
T ss_dssp             BCEEEECC-SHHHHHHHHHHHHHHHHCTTBCS--CEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEE---ES
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCccCCCCC--eEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEE---EC
Confidence            58999999 999999999998876       5  8999998763     22221111110        1123443   34


Q ss_pred             ChhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhh----hC-CCeEEEEecCCCCC
Q 017551           81 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAK----CC-PNATVNLISNPVNS  142 (369)
Q Consensus        81 dl~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~----~~-p~a~viv~tNPv~~  142 (369)
                      |+.+++++||+||++.  |              ...+.++++.+..    +. |+.+++..+|-++.
T Consensus        96 ~~~ea~~~aDvVilav--~--------------~~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~~  146 (375)
T 1yj8_A           96 DLASVINDADLLIFIV--P--------------CQYLESVLASIKESESIKIASHAKAISLTKGFIV  146 (375)
T ss_dssp             STHHHHTTCSEEEECC--C--------------HHHHHHHHHHHTC---CCCCTTCEEEECCCSCEE
T ss_pred             CHHHHHcCCCEEEEcC--C--------------HHHHHHHHHHHhhhhhccCCCCCEEEEeCCcccc
Confidence            6678899999999984  2              1246667777776    54 57778877876543

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=97.71  E-value=3.2e-05  Score=71.81  Aligned_cols=99  Identities=21%  Similarity=0.188  Sum_probs=71.5

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcC--CCcEEEEc
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLVIIP   95 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~--~ADiVii~   95 (369)
                      +..+||.|+||+|++|+.++..|...+.  +|+.+|.+.     .|+.+            ..++.++++  ++|+||.+
T Consensus        10 ~~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~-----~Dl~d------------~~~~~~~~~~~~~d~vih~   70 (292)
T 1vl0_A           10 HHHMKILITGANGQLGREIQKQLKGKNV--EVIPTDVQD-----LDITN------------VLAVNKFFNEKKPNVVINC   70 (292)
T ss_dssp             --CEEEEEESTTSHHHHHHHHHHTTSSE--EEEEECTTT-----CCTTC------------HHHHHHHHHHHCCSEEEEC
T ss_pred             cccceEEEECCCChHHHHHHHHHHhCCC--eEEeccCcc-----CCCCC------------HHHHHHHHHhcCCCEEEEC
Confidence            3468999999999999999999998886  899998752     22222            123456666  79999999


Q ss_pred             CCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           96 AGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        96 ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ||.....  .....+.+..|+.....+++.+.+...  .++++|
T Consensus        71 A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~--~iv~~S  112 (292)
T 1vl0_A           71 AAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA--EIVQIS  112 (292)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC--EEEEEE
T ss_pred             CccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEec
Confidence            9864311  123456778899999999999988754  555554

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=97.71  E-value=0.0001  Score=69.17  Aligned_cols=97  Identities=11%  Similarity=0.151  Sum_probs=65.1

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCC-CcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~-~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      .+||+|||+ |.+|+.++..|...++ ..+|.++|++....  .++....   .+..   +++..+++++||+||++.  
T Consensus         3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~--~~l~~~~---gi~~---~~~~~~~~~~aDvVilav--   71 (280)
T 3tri_A            3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKL--DFFKEKC---GVHT---TQDNRQGALNADVVVLAV--   71 (280)
T ss_dssp             CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHH--HHHHHTT---CCEE---ESCHHHHHSSCSEEEECS--
T ss_pred             CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHH--HHHHHHc---CCEE---eCChHHHHhcCCeEEEEe--
Confidence            479999999 9999999999998874 45899999986321  2222211   2232   245678999999999985  


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhh--CCCeEEEEecCCCC
Q 017551           99 PRKPGMTRDDLFNINAGIVRTLCEGIAKC--CPNATVNLISNPVN  141 (369)
Q Consensus        99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~--~p~a~viv~tNPv~  141 (369)
                      |  |            ..+.++.+++..+  .++.+++.+++.+.
T Consensus        72 ~--p------------~~~~~vl~~l~~~~l~~~~iiiS~~agi~  102 (280)
T 3tri_A           72 K--P------------HQIKMVCEELKDILSETKILVISLAVGVT  102 (280)
T ss_dssp             C--G------------GGHHHHHHHHHHHHHTTTCEEEECCTTCC
T ss_pred             C--H------------HHHHHHHHHHHhhccCCCeEEEEecCCCC
Confidence            2  2            1234555556654  35666766666554

>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}

Probab=97.71  E-value=6e-05  Score=74.33  Aligned_cols=101  Identities=16%  Similarity=0.336  Sum_probs=68.6

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCC------CcEEEEEeCCCc---hhHHHHhh--ccc--------CCCeEEEEe
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPL------VSVLHLYDVVNT---PGVTADIS--HMD--------TGAVVRGFL   77 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~------~~el~L~D~~~~---~g~~~dL~--~~~--------~~~~v~~~~   77 (369)
                      ..+|.||+|||| |.-|+++|..|+.++.      ..+|.||..++.   ...+..+.  |..        .+.+++.  
T Consensus        31 ~~~p~KI~ViGa-GsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~--  107 (391)
T 4fgw_A           31 AEKPFKVTVIGS-GNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVA--  107 (391)
T ss_dssp             --CCEEEEEECC-SHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEE--
T ss_pred             cCCCCeEEEECc-CHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEE--
Confidence            456789999999 9999999999987642      136999987651   11222232  321        2345665  


Q ss_pred             CCCChhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEec
Q 017551           78 GQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS  137 (369)
Q Consensus        78 ~t~dl~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t  137 (369)
                       ++|+.+++++||+||+..  |              ...++++++++..+- ++..++.++
T Consensus       108 -t~dl~~al~~ad~ii~av--P--------------s~~~r~~l~~l~~~~~~~~~iv~~~  151 (391)
T 4fgw_A          108 -NPDLIDSVKDVDIIVFNI--P--------------HQFLPRICSQLKGHVDSHVRAISCL  151 (391)
T ss_dssp             -ESCHHHHHTTCSEEEECS--C--------------GGGHHHHHHHHTTTSCTTCEEEECC
T ss_pred             -eCCHHHHHhcCCEEEEEC--C--------------hhhhHHHHHHhccccCCCceeEEec
Confidence             468999999999999973  3              244677888888776 456666654

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=97.71  E-value=0.00014  Score=68.93  Aligned_cols=113  Identities=17%  Similarity=0.106  Sum_probs=74.3

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC-CC---ChhhhcC--CCc
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QP---QLENALT--GMD   90 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~-t~---dl~~al~--~AD   90 (369)
                      ..+.|+|.|+||+|++|+.++..|+..+.  +|+++|.+.....  ++....  ..+..+.+ -+   ++.++++  ++|
T Consensus        17 ~~~~~~vlVTGasG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~--~~~~~l--~~v~~~~~Dl~d~~~~~~~~~~~~~D   90 (330)
T 2pzm_A           17 RGSHMRILITGGAGCLGSNLIEHWLPQGH--EILVIDNFATGKR--EVLPPV--AGLSVIEGSVTDAGLLERAFDSFKPT   90 (330)
T ss_dssp             TTTCCEEEEETTTSHHHHHHHHHHGGGTC--EEEEEECCSSSCG--GGSCSC--TTEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCCccch--hhhhcc--CCceEEEeeCCCHHHHHHHHhhcCCC
Confidence            34457999999999999999999998887  9999998642110  011110  23333221 12   2456677  999


Q ss_pred             EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           91 LVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        91 iVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      +||.+||..........+ +..|+.....+++.+.+.... .+|++|
T Consensus        91 ~vih~A~~~~~~~~~~~~-~~~N~~~~~~l~~a~~~~~~~-~iV~~S  135 (330)
T 2pzm_A           91 HVVHSAAAYKDPDDWAED-AATNVQGSINVAKAASKAGVK-RLLNFQ  135 (330)
T ss_dssp             EEEECCCCCSCTTCHHHH-HHHHTHHHHHHHHHHHHHTCS-EEEEEE
T ss_pred             EEEECCccCCCccccChh-HHHHHHHHHHHHHHHHHcCCC-EEEEec
Confidence            999999865432112233 788999999999998876543 455554

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=97.70  E-value=0.00044  Score=60.20  Aligned_cols=103  Identities=15%  Similarity=0.133  Sum_probs=69.0

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC----CCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG----QPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~----t~dl~~al~~ADiVii~a   96 (369)
                      |||.|+||+|++|+.++..|...+.  +|++++.+....     ... ....+..+.+    ..++.++++++|+||.++
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~--~V~~~~r~~~~~-----~~~-~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   75 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGY--EVTVLVRDSSRL-----PSE-GPRPAHVVVGDVLQAADVDKTVAGQDAVIVLL   75 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCGGGS-----CSS-SCCCSEEEESCTTSHHHHHHHHTTCSEEEECC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEEeChhhc-----ccc-cCCceEEEEecCCCHHHHHHHHcCCCEEEECc
Confidence            6999999999999999999999886  999999875211     110 0122332211    124557889999999998


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      |.......     ...|......+++.+.+.... .++++|
T Consensus        76 ~~~~~~~~-----~~~n~~~~~~~~~~~~~~~~~-~~v~~S  110 (206)
T 1hdo_A           76 GTRNDLSP-----TTVMSEGARNIVAAMKAHGVD-KVVACT  110 (206)
T ss_dssp             CCTTCCSC-----CCHHHHHHHHHHHHHHHHTCC-EEEEEC
T ss_pred             cCCCCCCc-----cchHHHHHHHHHHHHHHhCCC-eEEEEe
Confidence            86432111     135677788888888876544 355454

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=97.70  E-value=7.7e-05  Score=71.35  Aligned_cols=114  Identities=17%  Similarity=0.146  Sum_probs=75.0

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEeC-CC---ChhhhcCC--CcE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLG-QP---QLENALTG--MDL   91 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~~-t~---dl~~al~~--ADi   91 (369)
                      .++|.|+||+|++|++++..|+..+.  +|+++|.+..  ......+..   ...+..+.+ -+   ++.+++++  .|+
T Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   83 (357)
T 1rkx_A            9 GKRVFVTGHTGFKGGWLSLWLQTMGA--TVKGYSLTAPTVPSLFETARV---ADGMQSEIGDIRDQNKLLESIREFQPEI   83 (357)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCSSSSCHHHHTTT---TTTSEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCC--eEEEEeCCCcccchhhHhhcc---CCceEEEEccccCHHHHHHHHHhcCCCE
Confidence            46999999999999999999999887  9999998752  112111211   122232221 12   24455665  899


Q ss_pred             EEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 017551           92 VIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        92 Vii~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      ||.+||.+...  .......+..|+.....+++.+.+......++++|-
T Consensus        84 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS  132 (357)
T 1rkx_A           84 VFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITS  132 (357)
T ss_dssp             EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECC
T ss_pred             EEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecC
Confidence            99999864311  123456678899999999999888753345665553

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=97.70  E-value=8.5e-05  Score=69.61  Aligned_cols=64  Identities=8%  Similarity=0.115  Sum_probs=49.2

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      |||+|||+ |.+|+.++..|...++  +|++||++.....  .+.+.    .+..   ++++.+++++||+||++.
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~--~V~~~dr~~~~~~--~~~~~----g~~~---~~~~~~~~~~aDvvi~~v   65 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGC--SVTIWNRSPEKAE--ELAAL----GAER---AATPCEVVESCPVTFAML   65 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSGGGGH--HHHHT----TCEE---CSSHHHHHHHCSEEEECC
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCC--eEEEEcCCHHHHH--HHHHC----CCee---cCCHHHHHhcCCEEEEEc
Confidence            79999999 9999999999999987  9999999863211  12221    1222   357788999999999984

>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}

Probab=97.69  E-value=6.3e-05  Score=72.29  Aligned_cols=96  Identities=23%  Similarity=0.295  Sum_probs=64.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhccc---------CCCeEEEEeCCCChhhhcCCCc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD---------TGAVVRGFLGQPQLENALTGMD   90 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~---------~~~~v~~~~~t~dl~~al~~AD   90 (369)
                      .|||+|||+ |.+|+.++..|+..+.  +|.++|.++.   ...+....         ....++.   +++++ +++++|
T Consensus         3 ~mkI~IiGa-G~~G~~~a~~L~~~g~--~V~~~~r~~~---~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~-~~~~~D   72 (335)
T 3ghy_A            3 LTRICIVGA-GAVGGYLGARLALAGE--AINVLARGAT---LQALQTAGLRLTEDGATHTLPVRA---THDAA-ALGEQD   72 (335)
T ss_dssp             CCCEEEESC-CHHHHHHHHHHHHTTC--CEEEECCHHH---HHHHHHTCEEEEETTEEEEECCEE---ESCHH-HHCCCS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHCCC--EEEEEEChHH---HHHHHHCCCEEecCCCeEEEeeeE---ECCHH-HcCCCC
Confidence            479999999 9999999999999887  9999998531   11122110         0011121   34664 479999


Q ss_pred             EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCC
Q 017551           91 LVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVN  141 (369)
Q Consensus        91 iVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~  141 (369)
                      +||++.  |              ...+.++++.+..+. |+..|+.++|.+.
T Consensus        73 ~Vilav--k--------------~~~~~~~~~~l~~~l~~~~~iv~~~nGi~  108 (335)
T 3ghy_A           73 VVIVAV--K--------------APALESVAAGIAPLIGPGTCVVVAMNGVP  108 (335)
T ss_dssp             EEEECC--C--------------HHHHHHHHGGGSSSCCTTCEEEECCSSSC
T ss_pred             EEEEeC--C--------------chhHHHHHHHHHhhCCCCCEEEEECCCCc
Confidence            999984  1              122456666776654 6888888899953

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=97.68  E-value=3.4e-05  Score=71.43  Aligned_cols=96  Identities=22%  Similarity=0.216  Sum_probs=71.4

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcC--CCcEEEEcCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLVIIPAGV   98 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~--~ADiVii~ag~   98 (369)
                      |||.|+||+|++|+.++..|...+.  +|+.+|...     .|+.+            ..++.++++  ++|+||.+|+.
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~-----~D~~d------------~~~~~~~~~~~~~d~vi~~a~~   66 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEY--DIYPFDKKL-----LDITN------------ISQVQQVVQEIRPHIIIHCAAY   66 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTE--EEEEECTTT-----SCTTC------------HHHHHHHHHHHCCSEEEECCCC
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCC--EEEEecccc-----cCCCC------------HHHHHHHHHhcCCCEEEECCcc
Confidence            4899999999999999999998886  999998732     22222            123445666  79999999987


Q ss_pred             CCCCC--CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           99 PRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        99 p~k~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      .....  ......+..|+.....+++.+.+...  .++++|
T Consensus        67 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~v~~S  105 (287)
T 3sc6_A           67 TKVDQAEKERDLAYVINAIGARNVAVASQLVGA--KLVYIS  105 (287)
T ss_dssp             CCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC--EEEEEE
T ss_pred             cChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEc
Confidence            54221  35667788999999999999988765  355554

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=97.67  E-value=1.4e-05  Score=77.26  Aligned_cols=93  Identities=19%  Similarity=0.216  Sum_probs=67.6

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  100 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p~  100 (369)
                      |||.|+||+|++|+.++..|+..+.+ +++.+|++                     ....++.++++++|+||.+|+...
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~-~v~~~d~~---------------------~d~~~l~~~~~~~d~Vih~a~~~~   58 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDH-HIFEVHRQ---------------------TKEEELESALLKADFIVHLAGVNR   58 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCC-EEEECCTT---------------------CCHHHHHHHHHHCSEEEECCCSBC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCC-EEEEECCC---------------------CCHHHHHHHhccCCEEEECCcCCC
Confidence            69999999999999999999887742 78888874                     012345677889999999998654


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551          101 KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus       101 k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ..  ...+....|+...+.+++.+++......++.+|
T Consensus        59 ~~--~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~S   93 (369)
T 3st7_A           59 PE--HDKEFSLGNVSYLDHVLDILTRNTKKPAILLSS   93 (369)
T ss_dssp             TT--CSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEE
T ss_pred             CC--CHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeC
Confidence            21  222334567888888888888776554555554

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=97.67  E-value=9.7e-05  Score=71.70  Aligned_cols=119  Identities=13%  Similarity=0.094  Sum_probs=74.5

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchh------------------HHHHhhcccCCCeEEEEeC
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG------------------VTADISHMDTGAVVRGFLG   78 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g------------------~~~dL~~~~~~~~v~~~~~   78 (369)
                      ..+.++|.|+||+|+||++++..|+..+.  +|+++|......                  ...++.... ...+..+.+
T Consensus         8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~v~~~~~   84 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCGWATALHLSKKNY--EVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT-GKSIELYVG   84 (404)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH-CCCCEEEES
T ss_pred             ccCCCeEEEeCCCcHHHHHHHHHHHhCCC--eEEEEEecCccccccccccccccccchhhhhhhhHhhcc-CCceEEEEC
Confidence            34568999999999999999999999887  999999754211                  111111111 123333221


Q ss_pred             -CC---ChhhhcCC--CcEEEEcCCCCCCC--CCCH---HHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 017551           79 -QP---QLENALTG--MDLVIIPAGVPRKP--GMTR---DDLFNINAGIVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        79 -t~---dl~~al~~--ADiVii~ag~p~k~--g~~r---~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                       -+   ++.+++++  +|+||.+||....+  ..+.   ...+..|+.....+++.+.+......++++|-
T Consensus        85 Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS  155 (404)
T 1i24_A           85 DICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGT  155 (404)
T ss_dssp             CTTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECC
T ss_pred             CCCCHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCc
Confidence             12   24456777  99999999864311  1122   23567899999999999988765335666553

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=97.66  E-value=0.00014  Score=69.45  Aligned_cols=67  Identities=18%  Similarity=0.302  Sum_probs=48.9

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch-hHHHHhhcccCCCeEEEEeCCCChhh-hcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGFLGQPQLEN-ALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~-g~~~dL~~~~~~~~v~~~~~t~dl~~-al~~ADiVii~a   96 (369)
                      +||+|||+ |.+|..++..|+..+...+|+++|.+... ..+.++.     .....   ++++++ ++++||+||++.
T Consensus        34 ~kI~IIG~-G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G-----~~~~~---~~~~~~~~~~~aDvVilav  102 (314)
T 3ggo_A           34 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLG-----IIDEG---TTSIAKVEDFSPDFVMLSS  102 (314)
T ss_dssp             SEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTT-----SCSEE---ESCTTGGGGGCCSEEEECS
T ss_pred             CEEEEEee-CHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCC-----Ccchh---cCCHHHHhhccCCEEEEeC
Confidence            79999998 99999999999998876699999998622 1222111     10011   245667 899999999984

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=97.66  E-value=0.00013  Score=69.30  Aligned_cols=68  Identities=13%  Similarity=0.170  Sum_probs=51.3

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      ..+.+||+|||+ |.+|..++..|+..++  +|++||++..+..  .+...    .+..   .+++.+++++||+||++.
T Consensus        18 ~~~m~~I~iIG~-G~mG~~~A~~l~~~G~--~V~~~dr~~~~~~--~l~~~----g~~~---~~~~~~~~~~aDvvi~~v   85 (310)
T 3doj_A           18 GSHMMEVGFLGL-GIMGKAMSMNLLKNGF--KVTVWNRTLSKCD--ELVEH----GASV---CESPAEVIKKCKYTIAML   85 (310)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSGGGGH--HHHHT----TCEE---CSSHHHHHHHCSEEEECC
T ss_pred             cccCCEEEEECc-cHHHHHHHHHHHHCCC--eEEEEeCCHHHHH--HHHHC----CCeE---cCCHHHHHHhCCEEEEEc
Confidence            345689999999 9999999999999998  9999999863221  12221    1222   356788999999999984

>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}

Probab=97.65  E-value=0.00027  Score=67.45  Aligned_cols=114  Identities=18%  Similarity=0.209  Sum_probs=72.1

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcc-----cC----CCeEEEEeCCCChhhhcCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM-----DT----GAVVRGFLGQPQLENALTG   88 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~-----~~----~~~v~~~~~t~dl~~al~~   88 (369)
                      ...+||+|||+ |.+|+.++..|+..+.  +|.++ .+....  ..+...     ..    ...+..   ++++ +++++
T Consensus        17 ~~~~kI~IiGa-Ga~G~~~a~~L~~~G~--~V~l~-~~~~~~--~~i~~~g~~~~~~~~~~~~~~~~---~~~~-~~~~~   86 (318)
T 3hwr_A           17 FQGMKVAIMGA-GAVGCYYGGMLARAGH--EVILI-ARPQHV--QAIEATGLRLETQSFDEQVKVSA---SSDP-SAVQG   86 (318)
T ss_dssp             ---CEEEEESC-SHHHHHHHHHHHHTTC--EEEEE-CCHHHH--HHHHHHCEEEECSSCEEEECCEE---ESCG-GGGTT
T ss_pred             ccCCcEEEECc-CHHHHHHHHHHHHCCC--eEEEE-EcHhHH--HHHHhCCeEEEcCCCcEEEeeee---eCCH-HHcCC
Confidence            34679999999 9999999999999987  99999 664211  111110     00    011222   3455 45799


Q ss_pred             CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe
Q 017551           89 MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  165 (369)
Q Consensus        89 ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~  165 (369)
                      +|+||++....                -+.++++.+..+. |+.+|+.++|..+....     +.+.  +| +++++-
T Consensus        87 ~D~vilavk~~----------------~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~-----l~~~--~~-~~vl~g  140 (318)
T 3hwr_A           87 ADLVLFCVKST----------------DTQSAALAMKPALAKSALVLSLQNGVENADT-----LRSL--LE-QEVAAA  140 (318)
T ss_dssp             CSEEEECCCGG----------------GHHHHHHHHTTTSCTTCEEEEECSSSSHHHH-----HHHH--CC-SEEEEE
T ss_pred             CCEEEEEcccc----------------cHHHHHHHHHHhcCCCCEEEEeCCCCCcHHH-----HHHH--cC-CcEEEE
Confidence            99999984111                1345666777664 67888889999887532     2333  55 677753

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=97.64  E-value=0.00014  Score=65.34  Aligned_cols=114  Identities=15%  Similarity=0.089  Sum_probs=72.5

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEE-eCCCChhhhcCCCcEEEEcCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~-~~t~dl~~al~~ADiVii~ag   97 (369)
                      ..++|.|+||+|++|+.++..|+..+...+|++++.+....  .++.. . ...+... +...++.++++++|+||..+|
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~--~~~~~-~-~~~~~~D~~d~~~~~~~~~~~d~vi~~a~   78 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGK--EKIGG-E-ADVFIGDITDADSINPAFQGIDALVILTS   78 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHH--HHTTC-C-TTEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCch--hhcCC-C-eeEEEecCCCHHHHHHHHcCCCEEEEecc
Confidence            45799999999999999999999983223999999875211  12211 0 0111211 111345678899999999988


Q ss_pred             CCCC------------CCC---CHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           98 VPRK------------PGM---TRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        98 ~p~k------------~g~---~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ....            +..   ........|+.....+++.+.+.... .++++|
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~iv~~S  132 (253)
T 1xq6_A           79 AVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVK-HIVVVG  132 (253)
T ss_dssp             CCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCS-EEEEEE
T ss_pred             ccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCC-EEEEEc
Confidence            5421            110   11234678888888999988877544 355544

>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A

Probab=97.64  E-value=0.00016  Score=67.69  Aligned_cols=96  Identities=14%  Similarity=0.085  Sum_probs=61.1

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      +.+||+|||+ |.+|+.++..|...+...+|.++|.+.....  .+.......  ..   ++++++++++||+||++.  
T Consensus         5 ~~~~I~iIG~-G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~--~~~~~g~~~--~~---~~~~~~~~~~aDvVilav--   74 (290)
T 3b1f_A            5 EEKTIYIAGL-GLIGASLALGIKRDHPHYKIVGYNRSDRSRD--IALERGIVD--EA---TADFKVFAALADVIILAV--   74 (290)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSSHHHHH--HHHHTTSCS--EE---ESCTTTTGGGCSEEEECS--
T ss_pred             ccceEEEEee-CHHHHHHHHHHHhCCCCcEEEEEcCCHHHHH--HHHHcCCcc--cc---cCCHHHhhcCCCEEEEcC--
Confidence            3579999998 9999999999987753348999999752211  122111101  22   235567889999999985  


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhh-C-CCeEEEEecC
Q 017551           99 PRKPGMTRDDLFNINAGIVRTLCEGIAKC-C-PNATVNLISN  138 (369)
Q Consensus        99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~-~-p~a~viv~tN  138 (369)
                      |              .....++++.+..+ . |+.+++.++|
T Consensus        75 p--------------~~~~~~v~~~l~~~~l~~~~ivi~~~~  102 (290)
T 3b1f_A           75 P--------------IKKTIDFIKILADLDLKEDVIITDAGS  102 (290)
T ss_dssp             C--------------HHHHHHHHHHHHTSCCCTTCEEECCCS
T ss_pred             C--------------HHHHHHHHHHHHhcCCCCCCEEEECCC
Confidence            2              01135566666665 4 5666665554

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=97.63  E-value=0.00016  Score=67.85  Aligned_cols=106  Identities=17%  Similarity=0.176  Sum_probs=70.4

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHhhcccCCCeEEEEe---CCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFL---GQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-~~g~~~dL~~~~~~~~v~~~~---~t~dl~~al~~ADiVii~a   96 (369)
                      ++|.|+||+|++|+.++..|...+   +++.++... ....   ...    ..+....   ...++.++++++|+||.+|
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g---~~v~~~~~~~~~~~---~~~----~~~~~~~~Dl~~~~~~~~~~~~d~vih~a   71 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESN---EIVVIDNLSSGNEE---FVN----EAARLVKADLAADDIKDYLKGAEEVWHIA   71 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTS---CEEEECCCSSCCGG---GSC----TTEEEECCCTTTSCCHHHHTTCSEEEECC
T ss_pred             CEEEEECCCchHHHHHHHHHHhCC---CEEEEEcCCCCChh---hcC----CCcEEEECcCChHHHHHHhcCCCEEEECC
Confidence            589999999999999999999888   344444433 1110   001    1122111   0145667889999999999


Q ss_pred             CCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           97 GVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        97 g~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      +.+...  .......+..|+.....+++.+.+....- ++++|
T Consensus        72 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~-iv~~S  113 (313)
T 3ehe_A           72 ANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSR-IVFTS  113 (313)
T ss_dssp             CCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCE-EEEEC
T ss_pred             CCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCe-EEEeC
Confidence            865322  24466778899999999999998876444 55554

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=97.62  E-value=0.00017  Score=63.49  Aligned_cols=105  Identities=11%  Similarity=0.068  Sum_probs=72.5

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC----CCChhhhcCCCcEEEEc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG----QPQLENALTGMDLVIIP   95 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~----t~dl~~al~~ADiVii~   95 (369)
                      .+||.|+||+|++|+.++..|...+...+|++++.+...      .    ...+..+.+    ..++.+++  +|+||.+
T Consensus         5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~------~----~~~~~~~~~D~~~~~~~~~~~--~d~vi~~   72 (215)
T 2a35_A            5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA------E----HPRLDNPVGPLAELLPQLDGS--IDTAFCC   72 (215)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC------C----CTTEECCBSCHHHHGGGCCSC--CSEEEEC
T ss_pred             CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc------c----CCCceEEeccccCHHHHHHhh--hcEEEEC
Confidence            469999999999999999999998865689999987532      0    112222111    12233344  8999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           96 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        96 ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      +|.......+..++...|......+++.+.+.... .++++|
T Consensus        73 a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S  113 (215)
T 2a35_A           73 LGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGAR-HYLVVS  113 (215)
T ss_dssp             CCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCC-EEEEEC
T ss_pred             eeeccccCCCHHHHHHhhHHHHHHHHHHHHHcCCC-EEEEEC
Confidence            98654222456677788999999999998876544 355554

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=97.62  E-value=0.00022  Score=64.44  Aligned_cols=102  Identities=20%  Similarity=0.192  Sum_probs=68.8

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch---hHHHHhhcccCCCeEEEEeCCCChhhhc----CCCcEEE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP---GVTADISHMDTGAVVRGFLGQPQLENAL----TGMDLVI   93 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~---g~~~dL~~~~~~~~v~~~~~t~dl~~al----~~ADiVi   93 (369)
                      ++|.|+||+|++|+.++..|+..+.  +|+++|.+...   ....|+.+.            .++.+++    .+.|+||
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~D~~~~------------~~~~~~~~~~~~~~d~vi   67 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGH--TVIGIDRGQADIEADLSTPGGRE------------TAVAAVLDRCGGVLDGLV   67 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSSSSEECCTTSHHHHH------------HHHHHHHHHHTTCCSEEE
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCC--EEEEEeCChhHccccccCCcccH------------HHHHHHHHHcCCCccEEE
Confidence            3799999999999999999999887  89999987521   112233321            1223334    3899999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEec
Q 017551           94 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC---CPNATVNLIS  137 (369)
Q Consensus        94 i~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~t  137 (369)
                      ..||.... .......+..|+.....+.+.+...   .....++++|
T Consensus        68 ~~Ag~~~~-~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~s  113 (255)
T 2dkn_A           68 CCAGVGVT-AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVG  113 (255)
T ss_dssp             ECCCCCTT-SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEEC
T ss_pred             ECCCCCCc-chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEe
Confidence            99987542 2335667778877777777766554   2235566665

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=97.62  E-value=0.00021  Score=67.86  Aligned_cols=112  Identities=17%  Similarity=0.057  Sum_probs=72.3

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC-CC---ChhhhcCC--CcE
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QP---QLENALTG--MDL   91 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~-t~---dl~~al~~--ADi   91 (369)
                      -+.++|.|+||+|++|+.++..|+..+.  +|+++|.+..... ..+...   ..+..+.+ -+   ++.+++++  +|+
T Consensus        19 ~~~~~vlVTGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~-~~l~~~---~~~~~~~~Dl~d~~~~~~~~~~~~~D~   92 (333)
T 2q1w_A           19 SHMKKVFITGICGQIGSHIAELLLERGD--KVVGIDNFATGRR-EHLKDH---PNLTFVEGSIADHALVNQLIGDLQPDA   92 (333)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSSCCG-GGSCCC---TTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCC--EEEEEECCCccch-hhHhhc---CCceEEEEeCCCHHHHHHHHhccCCcE
Confidence            3457999999999999999999999886  9999998652110 011111   23333221 12   24466777  999


Q ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           92 VIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        92 Vii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ||.+||..........+ +..|+.....+++.+.+.... .++++|
T Consensus        93 vih~A~~~~~~~~~~~~-~~~N~~~~~~l~~a~~~~~~~-~iV~~S  136 (333)
T 2q1w_A           93 VVHTAASYKDPDDWYND-TLTNCVGGSNVVQAAKKNNVG-RFVYFQ  136 (333)
T ss_dssp             EEECCCCCSCTTCHHHH-HHHHTHHHHHHHHHHHHTTCS-EEEEEE
T ss_pred             EEECceecCCCccCChH-HHHHHHHHHHHHHHHHHhCCC-EEEEEC
Confidence            99999865432111223 778999999999988876433 455543

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=97.61  E-value=4.3e-05  Score=71.10  Aligned_cols=99  Identities=16%  Similarity=0.152  Sum_probs=70.2

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCC--CcEEEEcCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTG--MDLVIIPAGV   98 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~--ADiVii~ag~   98 (369)
                      |||.|+||+|++|++++..|. .+.  +|+.+|.+.. ....|+.+            ..++.+++++  +|+||.+||.
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~--~V~~~~r~~~-~~~~D~~d------------~~~~~~~~~~~~~d~vih~a~~   64 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVG--NLIALDVHSK-EFCGDFSN------------PKGVAETVRKLRPDVIVNAAAH   64 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTS--EEEEECTTCS-SSCCCTTC------------HHHHHHHHHHHCCSEEEECCCC
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCC--eEEEeccccc-cccccCCC------------HHHHHHHHHhcCCCEEEECccc
Confidence            689999999999999999988 776  9999998641 01111111            1234566776  9999999986


Q ss_pred             CCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           99 PRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        99 p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ....  .....+.+..|+.....+++.+.+...  .++++|
T Consensus        65 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~--~~v~~S  103 (299)
T 1n2s_A           65 TAVDKAESEPELAQLLNATSVEAIAKAANETGA--WVVHYS  103 (299)
T ss_dssp             CCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC--EEEEEE
T ss_pred             CCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC--cEEEEe
Confidence            4311  234566778899999999999987653  455554

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=97.61  E-value=0.00026  Score=66.37  Aligned_cols=112  Identities=9%  Similarity=-0.024  Sum_probs=69.3

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeC-CCc---hh-HHHHhhcccCCCeEEEEe----CCCChhhhcCCCcE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV-VNT---PG-VTADISHMDTGAVVRGFL----GQPQLENALTGMDL   91 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~-~~~---~g-~~~dL~~~~~~~~v~~~~----~t~dl~~al~~ADi   91 (369)
                      +||.|+||+|++|++++..|+..+.  +|+.++. +..   .. ...++...  ...+..+.    ...++.++++++|+
T Consensus         2 k~vlVTGatG~iG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~d~   77 (322)
T 2p4h_X            2 GRVCVTGGTGFLGSWIIKSLLENGY--SVNTTIRADPERKRDVSFLTNLPGA--SEKLHFFNADLSNPDSFAAAIEGCVG   77 (322)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC--EEEEECCCC----CCCHHHHTSTTH--HHHEEECCCCTTCGGGGHHHHTTCSE
T ss_pred             CEEEEECChhHHHHHHHHHHHHCCC--EEEEEEeCCccchhHHHHHHhhhcc--CCceEEEecCCCCHHHHHHHHcCCCE
Confidence            5899999999999999999999887  8888876 431   01 11111100  01222221    12346678899999


Q ss_pred             EEEcCCCCCCCC-CC-HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           92 VIIPAGVPRKPG-MT-RDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        92 Vii~ag~p~k~g-~~-r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ||.+|+.. ... .. ..+.+..|+.....+++.+.+...-..++++|
T Consensus        78 vih~A~~~-~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~S  124 (322)
T 2p4h_X           78 IFHTASPI-DFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTS  124 (322)
T ss_dssp             EEECCCCC---------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEE
T ss_pred             EEEcCCcc-cCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Confidence            99998632 111 11 23477889999999999888762123455543

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=97.61  E-value=0.00012  Score=67.57  Aligned_cols=94  Identities=14%  Similarity=0.215  Sum_probs=63.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcE-EEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSV-LHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~e-l~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      .|||+|||+ |.+|+.++..|...+.  + +.++|.+....  ..+....   .+..   +++++++++++|+||++.  
T Consensus        10 ~m~i~iiG~-G~mG~~~a~~l~~~g~--~~v~~~~~~~~~~--~~~~~~~---g~~~---~~~~~~~~~~~Dvvi~av--   76 (266)
T 3d1l_A           10 DTPIVLIGA-GNLATNLAKALYRKGF--RIVQVYSRTEESA--RELAQKV---EAEY---TTDLAEVNPYAKLYIVSL--   76 (266)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHHTC--CEEEEECSSHHHH--HHHHHHT---TCEE---ESCGGGSCSCCSEEEECC--
T ss_pred             CCeEEEEcC-CHHHHHHHHHHHHCCC--eEEEEEeCCHHHH--HHHHHHc---CCce---eCCHHHHhcCCCEEEEec--
Confidence            479999999 9999999999988775  5 89999875221  1122110   1222   245677889999999984  


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCC
Q 017551           99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPV  140 (369)
Q Consensus        99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv  140 (369)
                      |           . +  ...++++.+.... |+.+++..|+-.
T Consensus        77 ~-----------~-~--~~~~v~~~l~~~~~~~~ivv~~s~~~  105 (266)
T 3d1l_A           77 K-----------D-S--AFAELLQGIVEGKREEALMVHTAGSI  105 (266)
T ss_dssp             C-----------H-H--HHHHHHHHHHTTCCTTCEEEECCTTS
T ss_pred             C-----------H-H--HHHHHHHHHHhhcCCCcEEEECCCCC
Confidence            2           1 1  1356666776666 677777776644

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=97.60  E-value=0.00028  Score=70.96  Aligned_cols=119  Identities=13%  Similarity=0.046  Sum_probs=77.9

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCC-CcEEEEEeCCCchhH-HHHhhccc--------------CCCeEEEEeCC-
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGV-TADISHMD--------------TGAVVRGFLGQ-   79 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~-~~el~L~D~~~~~g~-~~dL~~~~--------------~~~~v~~~~~t-   79 (369)
                      ..+.++|.|+||+|++|+.++..|+..+. ..+|++++....... ...+.+..              ....+..+.+. 
T Consensus        70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl  149 (478)
T 4dqv_A           70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDK  149 (478)
T ss_dssp             CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence            34568999999999999999999888732 249999998762111 11111110              01345544321 


Q ss_pred             C---------ChhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           80 P---------QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        80 ~---------dl~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      +         ++.++++++|+||.+|+....  ....+.+..|+.....+++.+.+...+.+|.+-|
T Consensus       150 ~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~--~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS  214 (478)
T 4dqv_A          150 SEPDLGLDQPMWRRLAETVDLIVDSAAMVNA--FPYHELFGPNVAGTAELIRIALTTKLKPFTYVST  214 (478)
T ss_dssp             TSGGGGCCHHHHHHHHHHCCEEEECCSSCSB--SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEE
T ss_pred             CCcccCCCHHHHHHHHcCCCEEEECccccCC--cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEee
Confidence            1         245667899999999986533  2333456889999999999998876555554444

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=97.58  E-value=0.0011  Score=61.40  Aligned_cols=117  Identities=18%  Similarity=0.219  Sum_probs=73.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCCh---hhhc-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQL---ENAL-------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~dl---~~al-------   86 (369)
                      .++|.|+||+|++|..++..|+..+.  +|+++|.+..  .....++........+..+. .-+|.   .+++       
T Consensus        32 ~k~vlVTGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  109 (279)
T 1xg5_A           32 DRLALVTGASGGIGAAVARALVQQGL--KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH  109 (279)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence            46899999999999999999999987  8999998752  22223333221123344332 12232   2223       


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHhhhCC-CeEEEEecC
Q 017551           87 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCP-NATVNLISN  138 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p-~a~viv~tN  138 (369)
                      .+.|+||..||.....   ..+   ....+..|+..    .+.+.+.+.+... .+.|+++|.
T Consensus       110 g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS  172 (279)
T 1xg5_A          110 SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININS  172 (279)
T ss_dssp             CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECC
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcC
Confidence            3799999999864321   122   23455667665    6777777776653 466776653

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=97.58  E-value=5.6e-05  Score=69.51  Aligned_cols=103  Identities=18%  Similarity=0.189  Sum_probs=72.6

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC----CCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG----QPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~----t~dl~~al~~ADiVii~a   96 (369)
                      +||.|+||+|++|+.++..|...+.  +|+++|.+....    +.     ..+..+.+    ..++.++++++|+||..|
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~----~~-----~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a   71 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAH--EVRLSDIVDLGA----AE-----AHEEIVACDLADAQAVHDLVKDCDGIIHLG   71 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEE--EEEECCSSCCCC----CC-----TTEEECCCCTTCHHHHHHHHTTCSEEEECC
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCC--EEEEEeCCCccc----cC-----CCccEEEccCCCHHHHHHHHcCCCEEEECC
Confidence            4899999999999999999998886  899999875211    00     11222111    123557789999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      |..  ........+..|+.....+++.+.+.... .++++|
T Consensus        72 ~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~iv~~S  109 (267)
T 3ay3_A           72 GVS--VERPWNDILQANIIGAYNLYEAARNLGKP-RIVFAS  109 (267)
T ss_dssp             SCC--SCCCHHHHHHHTHHHHHHHHHHHHHTTCC-EEEEEE
T ss_pred             cCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCC-EEEEeC
Confidence            865  23345667788999999999988876433 455554

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.58  E-value=5.7e-05  Score=63.38  Aligned_cols=93  Identities=13%  Similarity=0.144  Sum_probs=63.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      .+||+|||+ |.+|+.++..|...+.  +|.++|.+..+  ..+.++.     ..+..   .++++++++++|+||.+.+
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~--~v~v~~r~~~~~~~~a~~~~-----~~~~~---~~~~~~~~~~~Divi~at~   89 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQY--KVTVAGRNIDHVRAFAEKYE-----YEYVL---INDIDSLIKNNDVIITATS   89 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTC--EEEEEESCHHHHHHHHHHHT-----CEEEE---CSCHHHHHHTCSEEEECSC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEcCCHHHHHHHHHHhC-----CceEe---ecCHHHHhcCCCEEEEeCC
Confidence            569999999 9999999998887775  59999998632  2222222     22222   4577888999999999865


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCC
Q 017551           98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS  142 (369)
Q Consensus        98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~  142 (369)
                      .+. +-..                  .....|..+++.+++|.++
T Consensus        90 ~~~-~~~~------------------~~~l~~g~~vid~~~p~~~  115 (144)
T 3oj0_A           90 SKT-PIVE------------------ERSLMPGKLFIDLGNPPNI  115 (144)
T ss_dssp             CSS-CSBC------------------GGGCCTTCEEEECCSSCSB
T ss_pred             CCC-cEee------------------HHHcCCCCEEEEccCCccC
Confidence            542 1110                  0112357889999999765

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=97.57  E-value=0.00079  Score=62.53  Aligned_cols=95  Identities=17%  Similarity=0.247  Sum_probs=60.2

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcC-CCcEEEEcCCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT-GMDLVIIPAGVP   99 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~-~ADiVii~ag~p   99 (369)
                      +||+|||+ |.+|+.++..|...+...+|+++|.+.....  .+....  .....   ++++.++++ +||+||++.  |
T Consensus         2 ~~I~iIG~-G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~--~~~~~g--~~~~~---~~~~~~~~~~~aDvVilav--p   71 (281)
T 2g5c_A            2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESIS--KAVDLG--IIDEG---TTSIAKVEDFSPDFVMLSS--P   71 (281)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHH--HHHHTT--SCSEE---ESCGGGGGGTCCSEEEECS--C
T ss_pred             cEEEEEec-CHHHHHHHHHHHhcCCCcEEEEEeCCHHHHH--HHHHCC--Ccccc---cCCHHHHhcCCCCEEEEcC--C
Confidence            58999998 9999999999998875448999999762211  111111  11111   245667889 999999984  2


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCC
Q 017551          100 RKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNP  139 (369)
Q Consensus       100 ~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP  139 (369)
                      .          .    ...+++..+..+. |+.+++.++|-
T Consensus        72 ~----------~----~~~~v~~~l~~~l~~~~iv~~~~~~   98 (281)
T 2g5c_A           72 V----------R----TFREIAKKLSYILSEDATVTDQGSV   98 (281)
T ss_dssp             H----------H----HHHHHHHHHHHHSCTTCEEEECCSC
T ss_pred             H----------H----HHHHHHHHHHhhCCCCcEEEECCCC
Confidence            1          1    1224444454443 67777766653

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=97.56  E-value=0.00025  Score=66.88  Aligned_cols=91  Identities=20%  Similarity=0.282  Sum_probs=61.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP   99 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p   99 (369)
                      .+||+|||+ |.+|..++..|+..++  +|++||++..+..  .+...    .+..   +++++++++ ||+||++...+
T Consensus        15 ~~~I~vIG~-G~mG~~~A~~l~~~G~--~V~~~dr~~~~~~--~~~~~----g~~~---~~~~~~~~~-aDvvi~~vp~~   81 (296)
T 3qha_A           15 QLKLGYIGL-GNMGAPMATRMTEWPG--GVTVYDIRIEAMT--PLAEA----GATL---ADSVADVAA-ADLIHITVLDD   81 (296)
T ss_dssp             CCCEEEECC-STTHHHHHHHHTTSTT--CEEEECSSTTTSH--HHHHT----TCEE---CSSHHHHTT-SSEEEECCSSH
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHCCC--eEEEEeCCHHHHH--HHHHC----CCEE---cCCHHHHHh-CCEEEEECCCh
Confidence            469999999 9999999999999887  9999999873211  11211    1222   457788888 99999985211


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 017551          100 RKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  138 (369)
Q Consensus       100 ~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN  138 (369)
                                     ..++++.+.+.... |+.+++..|+
T Consensus        82 ---------------~~~~~v~~~l~~~l~~g~ivv~~st  106 (296)
T 3qha_A           82 ---------------AQVREVVGELAGHAKPGTVIAIHST  106 (296)
T ss_dssp             ---------------HHHHHHHHHHHTTCCTTCEEEECSC
T ss_pred             ---------------HHHHHHHHHHHHhcCCCCEEEEeCC
Confidence                           12344445665554 5666665553

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=97.56  E-value=0.00026  Score=67.12  Aligned_cols=66  Identities=15%  Similarity=0.226  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      ..+||+|||. |.+|+.++..|+..++  +|.+||++....  ..+....    +..   .+++.+++++||+||++.
T Consensus         8 ~~~~IgiIG~-G~mG~~~A~~l~~~G~--~V~~~dr~~~~~--~~~~~~g----~~~---~~~~~e~~~~aDvVi~~v   73 (306)
T 3l6d_A            8 FEFDVSVIGL-GAMGTIMAQVLLKQGK--RVAIWNRSPGKA--AALVAAG----AHL---CESVKAALSASPATIFVL   73 (306)
T ss_dssp             CSCSEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSHHHH--HHHHHHT----CEE---CSSHHHHHHHSSEEEECC
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCHHHH--HHHHHCC----Cee---cCCHHHHHhcCCEEEEEe
Confidence            4579999999 9999999999999988  899999986221  1122211    121   356788999999999984

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=97.56  E-value=0.00034  Score=67.06  Aligned_cols=115  Identities=16%  Similarity=0.018  Sum_probs=70.7

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch---hHHHHhhccc--CCCeEEEEeC-CC---ChhhhcCC--C
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP---GVTADISHMD--TGAVVRGFLG-QP---QLENALTG--M   89 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~---g~~~dL~~~~--~~~~v~~~~~-t~---dl~~al~~--A   89 (369)
                      ++|.|+||+|++|++++..|+..+.  +|+++|.+...   ....++....  ....+..+.+ -+   ++.+++++  .
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   79 (372)
T 1db3_A            2 KVALITGVTGQDGSYLAEFLLEKGY--EVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQP   79 (372)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC--EEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCC
Confidence            5899999999999999999999886  99999986521   1111111100  0123433221 12   23445554  6


Q ss_pred             cEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCC--eEEEEec
Q 017551           90 DLVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPN--ATVNLIS  137 (369)
Q Consensus        90 DiVii~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~--a~viv~t  137 (369)
                      |+||.+||.....  .......+..|+.....+++.+.+...+  ..++++|
T Consensus        80 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~S  131 (372)
T 1db3_A           80 DEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQAS  131 (372)
T ss_dssp             SEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEE
T ss_pred             CEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeC
Confidence            9999999865322  1334566788988999999998877542  4566554

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=97.56  E-value=0.00017  Score=66.87  Aligned_cols=100  Identities=17%  Similarity=0.107  Sum_probs=67.8

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhC-CCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe----CCCChhhhcCCCcEEEEc
Q 017551           21 FKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL----GQPQLENALTGMDLVIIP   95 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~-~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~----~t~dl~~al~~ADiVii~   95 (369)
                      |||.|+||+|++|+.++..|... +.  +|++++.+....  .++..    ..+....    ...++.++++++|+||..
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~--~V~~~~R~~~~~--~~~~~----~~v~~~~~D~~d~~~l~~~~~~~d~vi~~   72 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHID--HFHIGVRNVEKV--PDDWR----GKVSVRQLDYFNQESMVEAFKGMDTVVFI   72 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCT--TEEEEESSGGGS--CGGGB----TTBEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCC--cEEEEECCHHHH--HHhhh----CCCEEEEcCCCCHHHHHHHHhCCCEEEEe
Confidence            68999999999999999998886 66  889998875221  11211    1222221    123466789999999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           96 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        96 ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ++....        ...|+...+.+++.+.+....- ++++|
T Consensus        73 a~~~~~--------~~~~~~~~~~l~~aa~~~gv~~-iv~~S  105 (289)
T 3e48_A           73 PSIIHP--------SFKRIPEVENLVYAAKQSGVAH-IIFIG  105 (289)
T ss_dssp             CCCCCS--------HHHHHHHHHHHHHHHHHTTCCE-EEEEE
T ss_pred             CCCCcc--------chhhHHHHHHHHHHHHHcCCCE-EEEEc
Confidence            875421        1347777888888888776444 44443

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=97.56  E-value=0.00022  Score=69.06  Aligned_cols=112  Identities=17%  Similarity=0.045  Sum_probs=75.1

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCC-CCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC-C---CChhhhcCCCcEEE
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-Q---PQLENALTGMDLVI   93 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~-~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~-t---~dl~~al~~ADiVi   93 (369)
                      +.|||.|+||+|++|+.++..|+..+ .  +|+++|.+..... ..+.   ....+..+.+ -   .++.++++++|+||
T Consensus        31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~--~V~~~~r~~~~~~-~~l~---~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi  104 (377)
T 2q1s_A           31 ANTNVMVVGGAGFVGSNLVKRLLELGVN--QVHVVDNLLSAEK-INVP---DHPAVRFSETSITDDALLASLQDEYDYVF  104 (377)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCS--EEEEECCCTTCCG-GGSC---CCTTEEEECSCTTCHHHHHHCCSCCSEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCc--eEEEEECCCCCch-hhcc---CCCceEEEECCCCCHHHHHHHhhCCCEEE
Confidence            35799999999999999999999888 6  9999998652110 1111   0233443321 1   23456788999999


Q ss_pred             EcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEec
Q 017551           94 IPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLIS  137 (369)
Q Consensus        94 i~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~t  137 (369)
                      .+||.....  .....+.+..|+.....+++.+.+. ... .+|++|
T Consensus       105 h~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~-~~V~~S  150 (377)
T 2q1s_A          105 HLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLK-KVVYSA  150 (377)
T ss_dssp             ECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCC-EEEEEE
T ss_pred             ECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCC-eEEEeC
Confidence            998864311  1234567788999999999998876 333 355554

>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*

Probab=97.56  E-value=0.00012  Score=67.93  Aligned_cols=99  Identities=18%  Similarity=0.242  Sum_probs=65.0

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccC-CCe--EEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT-GAV--VRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~-~~~--v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      |||+|||+ |.+|+.++..|...+.  +|.++|.+.....  ++..... ...  .....  ++ .++++++|+||++..
T Consensus         1 m~i~iiG~-G~~G~~~a~~l~~~g~--~V~~~~r~~~~~~--~l~~~~~~~~~~~~~~~~--~~-~~~~~~~d~vi~~v~   72 (291)
T 1ks9_A            1 MKITVLGC-GALGQLWLTALCKQGH--EVQGWLRVPQPYC--SVNLVETDGSIFNESLTA--ND-PDFLATSDLLLVTLK   72 (291)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSCCSEE--EEEEECTTSCEEEEEEEE--SC-HHHHHTCSEEEECSC
T ss_pred             CeEEEECc-CHHHHHHHHHHHhCCC--CEEEEEcCcccee--eEEEEcCCCceeeeeeee--cC-ccccCCCCEEEEEec
Confidence            69999999 9999999999999887  9999999762111  1211110 111  12212  33 467899999999852


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCh
Q 017551           98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNST  143 (369)
Q Consensus        98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~  143 (369)
                      .+    .            +.++++.+..+. |+.+++..+|..+..
T Consensus        73 ~~----~------------~~~v~~~l~~~l~~~~~vv~~~~g~~~~  103 (291)
T 1ks9_A           73 AW----Q------------VSDAVKSLASTLPVTTPILLIHNGMGTI  103 (291)
T ss_dssp             GG----G------------HHHHHHHHHTTSCTTSCEEEECSSSCTT
T ss_pred             HH----h------------HHHHHHHHHhhCCCCCEEEEecCCCCcH
Confidence            21    0            244555666554 677888889987654

>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}

Probab=97.55  E-value=0.00025  Score=67.34  Aligned_cols=117  Identities=17%  Similarity=0.217  Sum_probs=73.2

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhccc-----CCCeEEE--EeCCCChhhhcCCCcEEE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD-----TGAVVRG--FLGQPQLENALTGMDLVI   93 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~-----~~~~v~~--~~~t~dl~~al~~ADiVi   93 (369)
                      |||+|||+ |.+|+.++..|...+.  +|.++|.+..    ..+....     .......  ...+++. +++.++|+||
T Consensus         3 mkI~IiGa-GaiG~~~a~~L~~~g~--~V~~~~r~~~----~~i~~~g~~~~~~~g~~~~~~~~~~~~~-~~~~~~D~vi   74 (312)
T 3hn2_A            3 LRIAIVGA-GALGLYYGALLQRSGE--DVHFLLRRDY----EAIAGNGLKVFSINGDFTLPHVKGYRAP-EEIGPMDLVL   74 (312)
T ss_dssp             -CEEEECC-STTHHHHHHHHHHTSC--CEEEECSTTH----HHHHHTCEEEEETTCCEEESCCCEESCH-HHHCCCSEEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCC--eEEEEEcCcH----HHHHhCCCEEEcCCCeEEEeeceeecCH-HHcCCCCEEE
Confidence            69999999 9999999999999887  8999998752    1121110     0111111  0012454 4578999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chh
Q 017551           94 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TML  168 (369)
Q Consensus        94 i~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~L  168 (369)
                      ++.    |+..            +.++++.+..+. |+..|+.+.|-++....     +.+.  +|..+|++- +..
T Consensus        75 lav----k~~~------------~~~~l~~l~~~l~~~~~iv~l~nGi~~~~~-----l~~~--~~~~~v~~~~~~~  128 (312)
T 3hn2_A           75 VGL----KTFA------------NSRYEELIRPLVEEGTQILTLQNGLGNEEA-----LATL--FGAERIIGGVAFL  128 (312)
T ss_dssp             ECC----CGGG------------GGGHHHHHGGGCCTTCEEEECCSSSSHHHH-----HHHH--TCGGGEEEEEEEE
T ss_pred             Eec----CCCC------------cHHHHHHHHhhcCCCCEEEEecCCCCcHHH-----HHHH--CCCCcEEEEEEEe
Confidence            984    1111            224455666554 67888888998876532     2333  666787754 543

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=97.53  E-value=0.00026  Score=66.68  Aligned_cols=108  Identities=19%  Similarity=0.085  Sum_probs=72.3

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC-CC---ChhhhcC--CCcEEEE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QP---QLENALT--GMDLVII   94 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~-t~---dl~~al~--~ADiVii   94 (369)
                      |||.|+||+|++|+.++..|...+.  +|+++|.+..... ..+.     ..+..+.+ -+   ++.++++  ++|+||.
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~-~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~d~vih   73 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGL--SVVVVDNLQTGHE-DAIT-----EGAKFYNGDLRDKAFLRDVFTQENIEAVMH   73 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSSCCG-GGSC-----TTSEEEECCTTCHHHHHHHHHHSCEEEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCC--EEEEEeCCCcCch-hhcC-----CCcEEEECCCCCHHHHHHHHhhcCCCEEEE
Confidence            6899999999999999999999887  9999997652111 1111     12222211 12   2445667  8999999


Q ss_pred             cCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           95 PAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        95 ~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      +||.....  .......+..|+.....+++.+.+.... .++++|
T Consensus        74 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~~v~~S  117 (330)
T 2c20_A           74 FAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVD-KFIFSS  117 (330)
T ss_dssp             CCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCC-EEEEEC
T ss_pred             CCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCC-EEEEeC
Confidence            99865311  1234566788999999999998876543 355554

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=97.53  E-value=0.0003  Score=66.72  Aligned_cols=113  Identities=19%  Similarity=0.102  Sum_probs=72.9

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--------hhHHHHhhcccCCCeEEEEeC-CC---ChhhhcC-
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--------PGVTADISHMDTGAVVRGFLG-QP---QLENALT-   87 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--------~g~~~dL~~~~~~~~v~~~~~-t~---dl~~al~-   87 (369)
                      ++|.|+||+|++|++++..|+..+.  +|+++|.+..        .....++.... ...+..+.+ -+   ++.++++ 
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~   79 (348)
T 1ek6_A            3 EKVLVTGGAGYIGSHTVLELLEAGY--LPVVIDNFHNAFRGGGSLPESLRRVQELT-GRSVEFEEMDILDQGALQRLFKK   79 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTC--CEEEEECSSSSCBCSSSSBHHHHHHHHHH-TCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEecCCcccccccccHHHHHHHHhcc-CCceEEEECCCCCHHHHHHHHHh
Confidence            6899999999999999999999886  8999987431        11122222111 122232211 12   2445666 


Q ss_pred             -CCcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           88 -GMDLVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        88 -~ADiVii~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                       ++|+||.+||.....  .....+.+..|+.....+++.+.+....- +|++|
T Consensus        80 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-iv~~S  131 (348)
T 1ek6_A           80 YSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKN-LVFSS  131 (348)
T ss_dssp             CCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCE-EEEEE
T ss_pred             cCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCE-EEEEC
Confidence             899999999864211  12345677889999999999888765443 44444

>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}

Probab=97.53  E-value=0.00017  Score=69.13  Aligned_cols=96  Identities=19%  Similarity=0.192  Sum_probs=63.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhccc---CCC----eEEEEeCCCChhhhcCCCcEE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD---TGA----VVRGFLGQPQLENALTGMDLV   92 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~---~~~----~v~~~~~t~dl~~al~~ADiV   92 (369)
                      ++||+|||+ |.+|+.++..|...+.  +|.++|.+..+.  ..+....   ..+    .+..   ++++.+ ++++|+|
T Consensus        14 ~~kI~iIG~-G~mG~ala~~L~~~G~--~V~~~~r~~~~~--~~l~~~g~~~~~~~~~~~~~~---~~~~~~-~~~aDvV   84 (335)
T 1z82_A           14 EMRFFVLGA-GSWGTVFAQMLHENGE--EVILWARRKEIV--DLINVSHTSPYVEESKITVRA---TNDLEE-IKKEDIL   84 (335)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSHHHH--HHHHHHSCBTTBTTCCCCSEE---ESCGGG-CCTTEEE
T ss_pred             CCcEEEECc-CHHHHHHHHHHHhCCC--eEEEEeCCHHHH--HHHHHhCCcccCCCCeeeEEE---eCCHHH-hcCCCEE
Confidence            589999999 9999999999999887  999999975221  1122110   000    2333   245666 8999999


Q ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCC
Q 017551           93 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS  142 (369)
Q Consensus        93 ii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~  142 (369)
                      |++..    +            ..+.+++..+..  ++..++.++|.++.
T Consensus        85 il~vk----~------------~~~~~v~~~l~~--~~~~vv~~~nGi~~  116 (335)
T 1z82_A           85 VIAIP----V------------QYIREHLLRLPV--KPSMVLNLSKGIEI  116 (335)
T ss_dssp             EECSC----G------------GGHHHHHTTCSS--CCSEEEECCCCCCT
T ss_pred             EEECC----H------------HHHHHHHHHhCc--CCCEEEEEeCCCCC
Confidence            99842    1            113344444443  77788888987654

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.52  E-value=0.00014  Score=59.57  Aligned_cols=71  Identities=21%  Similarity=0.198  Sum_probs=45.0

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCCh---h-hhcCCCcEEEE
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQL---E-NALTGMDLVII   94 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl---~-~al~~ADiVii   94 (369)
                      +.|||+|+|+ |.+|+.++..|...+.  +++++|.+....  ..+.... ...+. ....++.   . ..++++|+||+
T Consensus         3 ~~m~i~IiG~-G~iG~~~a~~L~~~g~--~v~~~d~~~~~~--~~~~~~~-~~~~~-~~d~~~~~~l~~~~~~~~d~vi~   75 (140)
T 1lss_A            3 HGMYIIIAGI-GRVGYTLAKSLSEKGH--DIVLIDIDKDIC--KKASAEI-DALVI-NGDCTKIKTLEDAGIEDADMYIA   75 (140)
T ss_dssp             --CEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESCHHHH--HHHHHHC-SSEEE-ESCTTSHHHHHHTTTTTCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCC--eEEEEECCHHHH--HHHHHhc-CcEEE-EcCCCCHHHHHHcCcccCCEEEE
Confidence            4579999999 9999999999998886  899999875221  1222110 11111 1111222   2 23789999999


Q ss_pred             cC
Q 017551           95 PA   96 (369)
Q Consensus        95 ~a   96 (369)
                      +.
T Consensus        76 ~~   77 (140)
T 1lss_A           76 VT   77 (140)
T ss_dssp             CC
T ss_pred             ee
Confidence            85

>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6

Probab=97.52  E-value=0.00032  Score=66.62  Aligned_cols=98  Identities=24%  Similarity=0.290  Sum_probs=62.7

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeC--CCchhHHHHhhcccC----C---CeEEEEeCCCChhhhcCCCcE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV--VNTPGVTADISHMDT----G---AVVRGFLGQPQLENALTGMDL   91 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~--~~~~g~~~dL~~~~~----~---~~v~~~~~t~dl~~al~~ADi   91 (369)
                      |||+|||+ |.+|+.++..|...+.  +|.++|.  +...  ...+.....    .   ..+.... ..++.++++++|+
T Consensus         1 m~I~iiG~-G~mG~~~a~~L~~~g~--~V~~~~r~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~D~   74 (335)
T 1txg_A            1 MIVSILGA-GAMGSALSVPLVDNGN--EVRIWGTEFDTEI--LKSISAGREHPRLGVKLNGVEIFW-PEQLEKCLENAEV   74 (335)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCC--EEEEECCGGGHHH--HHHHHTTCCBTTTTBCCCSEEEEC-GGGHHHHHTTCSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCC--eEEEEEccCCHHH--HHHHHHhCcCcccCccccceEEec-HHhHHHHHhcCCE
Confidence            69999999 9999999999998887  9999998  5421  112222110    0   1223321 1166678999999


Q ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 017551           92 VIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  140 (369)
Q Consensus        92 Vii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv  140 (369)
                      ||++...+                .+.++++.+....|+.+++..+|-.
T Consensus        75 vi~~v~~~----------------~~~~v~~~i~~l~~~~~vv~~~ng~  107 (335)
T 1txg_A           75 VLLGVSTD----------------GVLPVMSRILPYLKDQYIVLISKGL  107 (335)
T ss_dssp             EEECSCGG----------------GHHHHHHHHTTTCCSCEEEECCCSE
T ss_pred             EEEcCChH----------------HHHHHHHHHhcCCCCCEEEEEcCcC
Confidence            99985211                1234444554423577777788766

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=97.52  E-value=0.00036  Score=66.06  Aligned_cols=113  Identities=17%  Similarity=0.139  Sum_probs=71.2

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC--CCcEE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT--GMDLV   92 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~--~ADiV   92 (369)
                      |||.|+||+|++|++++..|+..+.  +|+++|...  .......+.... ...+.... .-+|   +.++++  +.|+|
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~--~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~D~v   77 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGH--DVIILDNLCNSKRSVLPVIERLG-GKHPTFVEGDIRNEALMTEILHDHAIDTV   77 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSSCCTTHHHHHHHHH-TSCCEEEECCTTCHHHHHHHHHHTTCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEecCCCcchhHHHHHHhhc-CCcceEEEccCCCHHHHHHHhhccCCCEE
Confidence            6899999999999999999999887  899998643  111112222110 11222221 1122   334554  58999


Q ss_pred             EEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           93 IIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        93 ii~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      |.+||.....  .....+.+..|+.....+++.+.+....- ++++|
T Consensus        78 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-iv~~S  123 (338)
T 1udb_A           78 IHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKN-FIFSS  123 (338)
T ss_dssp             EECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCE-EEEEE
T ss_pred             EECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCe-EEEEc
Confidence            9999864211  12234567889999999999888765444 44443

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=97.51  E-value=0.00019  Score=68.12  Aligned_cols=114  Identities=22%  Similarity=0.248  Sum_probs=73.7

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCC-----CcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC----CCChhhhc-C
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPL-----VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG----QPQLENAL-T   87 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~-----~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~----t~dl~~al-~   87 (369)
                      -+.|+|.|+||+|++|++++..|+..+.     ..+|+++|.+......      .....+..+.+    ..++.+++ .
T Consensus        12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~------~~~~~~~~~~~Dl~d~~~~~~~~~~   85 (342)
T 2hrz_A           12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA------GFSGAVDARAADLSAPGEAEKLVEA   85 (342)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT------TCCSEEEEEECCTTSTTHHHHHHHT
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc------ccCCceeEEEcCCCCHHHHHHHHhc
Confidence            3457999999999999999999988771     0289999986521110      01223333221    22344566 4


Q ss_pred             CCcEEEEcCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHhhhC----CCeEEEEec
Q 017551           88 GMDLVIIPAGVPRKP-GMTRDDLFNINAGIVRTLCEGIAKCC----PNATVNLIS  137 (369)
Q Consensus        88 ~ADiVii~ag~p~k~-g~~r~~~~~~N~~i~~~i~~~i~~~~----p~a~viv~t  137 (369)
                      ++|+||.+||..... .......+..|+.....+.+.+.+..    +...++++|
T Consensus        86 ~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~S  140 (342)
T 2hrz_A           86 RPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTS  140 (342)
T ss_dssp             CCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_pred             CCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeC
Confidence            899999999865310 12344567788888888888888765    234455554

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=97.50  E-value=0.00015  Score=68.04  Aligned_cols=99  Identities=13%  Similarity=0.120  Sum_probs=70.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcC--CCcEEEEcCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLVIIPAG   97 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~--~ADiVii~ag   97 (369)
                      .|||.|+||+|++|++++..|+..+.  ++++++.+..    .|+.+            ..++.++++  ++|+||.+|+
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g~--~v~~~~r~~~----~D~~d------------~~~~~~~~~~~~~d~vih~a~   64 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRGD--VELVLRTRDE----LNLLD------------SRAVHDFFASERIDQVYLAAA   64 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTT--EEEECCCTTT----CCTTC------------HHHHHHHHHHHCCSEEEECCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCC--eEEEEecCcc----CCccC------------HHHHHHHHHhcCCCEEEEcCe
Confidence            46999999999999999999998887  7888775421    12221            123456677  9999999998


Q ss_pred             CCCCC---CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           98 VPRKP---GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        98 ~p~k~---g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      .....   .....+.+..|+.....+++.+.+.... .++++|
T Consensus        65 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S  106 (321)
T 1e6u_A           65 KVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVN-KLLFLG  106 (321)
T ss_dssp             CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCC-EEEEEC
T ss_pred             ecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-eEEEEc
Confidence            65311   1234567788999999999998876543 455555

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=97.49  E-value=0.00018  Score=68.01  Aligned_cols=67  Identities=19%  Similarity=0.156  Sum_probs=48.7

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      +.+||+|||+ |.+|+.++..|+..++  +|++||++...  +..+....  ... .   ++++.+++++||+||++.
T Consensus         6 ~~~~I~iIG~-G~mG~~~a~~l~~~G~--~V~~~dr~~~~--~~~~~~~g--~~~-~---~~~~~e~~~~aDvvi~~v   72 (303)
T 3g0o_A            6 TDFHVGIVGL-GSMGMGAARSCLRAGL--STWGADLNPQA--CANLLAEG--ACG-A---AASAREFAGVVDALVILV   72 (303)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHH--HHHHHHTT--CSE-E---ESSSTTTTTTCSEEEECC
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCC--eEEEEECCHHH--HHHHHHcC--Ccc-c---cCCHHHHHhcCCEEEEEC
Confidence            3579999999 9999999999999998  99999997622  12222211  111 1   235578899999999985

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.48  E-value=0.00047  Score=64.41  Aligned_cols=92  Identities=21%  Similarity=0.346  Sum_probs=62.4

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  100 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p~  100 (369)
                      |||+|||++|.+|+.++..|...+.  +|+++|.+....  ..+...  .  +..    +++.+++++||+||++.  | 
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~--~V~~~~r~~~~~--~~~~~~--g--~~~----~~~~~~~~~aDvVi~av--~-   76 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAH--HLAAIEIAPEGR--DRLQGM--G--IPL----TDGDGWIDEADVVVLAL--P-   76 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSS--EEEEECCSHHHH--HHHHHT--T--CCC----CCSSGGGGTCSEEEECS--C-
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC--EEEEEECCHHHH--HHHHhc--C--CCc----CCHHHHhcCCCEEEEcC--C-
Confidence            6999999889999999999999887  999999875221  112221  1  111    13457889999999984  2 


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCC
Q 017551          101 KPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPV  140 (369)
Q Consensus       101 k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv  140 (369)
                                .   ..+.++.+.+..+. |+.+++..|+..
T Consensus        77 ----------~---~~~~~v~~~l~~~l~~~~ivv~~s~~~  104 (286)
T 3c24_A           77 ----------D---NIIEKVAEDIVPRVRPGTIVLILDAAA  104 (286)
T ss_dssp             ----------H---HHHHHHHHHHGGGSCTTCEEEESCSHH
T ss_pred             ----------c---hHHHHHHHHHHHhCCCCCEEEECCCCc
Confidence                      0   11456667776664 577666666543

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=97.47  E-value=0.00069  Score=65.54  Aligned_cols=115  Identities=16%  Similarity=0.106  Sum_probs=73.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHH-hCCCCcEEEEEeCCCch----------hHHHH-hhcccC---CCe---EEEEeC-CC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMK-INPLVSVLHLYDVVNTP----------GVTAD-ISHMDT---GAV---VRGFLG-QP   80 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~-~~~~~~el~L~D~~~~~----------g~~~d-L~~~~~---~~~---v~~~~~-t~   80 (369)
                      .|+|.|+||+|++|++++..|+ ..+.  +|+++|.+...          ....+ +.+...   ...   +..+.+ -+
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~   79 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNH--SVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVR   79 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCC--EEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCC--EEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCC
Confidence            3799999999999999999999 8887  99999976421          11111 111110   012   333321 12


Q ss_pred             C---hhhhcC--C-CcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           81 Q---LENALT--G-MDLVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        81 d---l~~al~--~-ADiVii~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      |   +.++++  + +|+||.+||.....  .......+..|+.....+++.+.+....- +|++|
T Consensus        80 d~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~-iv~~S  143 (397)
T 1gy8_A           80 NEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDK-IIFSS  143 (397)
T ss_dssp             CHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCE-EEEEE
T ss_pred             CHHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCE-EEEEC
Confidence            2   345565  6 99999999865321  12345677889999999999988765444 44443

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=97.46  E-value=0.00065  Score=62.95  Aligned_cols=91  Identities=16%  Similarity=0.178  Sum_probs=60.1

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  100 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p~  100 (369)
                      |||+|||+ |.+|+.++..|...+.  +|+++|.+.....  .+....  .....   ++++.++ +++|+||++.  | 
T Consensus         1 m~i~iiG~-G~~G~~~a~~l~~~g~--~V~~~~~~~~~~~--~~~~~g--~~~~~---~~~~~~~-~~~D~vi~av--~-   66 (279)
T 2f1k_A            1 MKIGVVGL-GLIGASLAGDLRRRGH--YLIGVSRQQSTCE--KAVERQ--LVDEA---GQDLSLL-QTAKIIFLCT--P-   66 (279)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHHHH--HHHHTT--SCSEE---ESCGGGG-TTCSEEEECS--C-
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCC--EEEEEECCHHHHH--HHHhCC--CCccc---cCCHHHh-CCCCEEEEEC--C-
Confidence            68999998 9999999999998887  8999998762211  122111  11122   2456677 9999999985  2 


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 017551          101 KPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  138 (369)
Q Consensus       101 k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN  138 (369)
                                   ...+.++++.+..+. |+.+++.++|
T Consensus        67 -------------~~~~~~~~~~l~~~~~~~~~vv~~~~   92 (279)
T 2f1k_A           67 -------------IQLILPTLEKLIPHLSPTAIVTDVAS   92 (279)
T ss_dssp             -------------HHHHHHHHHHHGGGSCTTCEEEECCS
T ss_pred             -------------HHHHHHHHHHHHhhCCCCCEEEECCC
Confidence                         113455666666654 5676665544

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=97.45  E-value=0.00037  Score=67.87  Aligned_cols=95  Identities=14%  Similarity=0.236  Sum_probs=63.3

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCC---cEEE
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGM---DLVI   93 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~A---DiVi   93 (369)
                      ..+.|||+|||. |.+|++++..|+..+.  +|++||++...  +.++....    +.   ..++++++++++   |+||
T Consensus        19 Mm~~mkIgiIGl-G~mG~~~A~~L~~~G~--~V~v~dr~~~~--~~~l~~~g----~~---~~~s~~e~~~~a~~~DvVi   86 (358)
T 4e21_A           19 YFQSMQIGMIGL-GRMGADMVRRLRKGGH--ECVVYDLNVNA--VQALEREG----IA---GARSIEEFCAKLVKPRVVW   86 (358)
T ss_dssp             ---CCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHH--HHHHHTTT----CB---CCSSHHHHHHHSCSSCEEE
T ss_pred             hhcCCEEEEECc-hHHHHHHHHHHHhCCC--EEEEEeCCHHH--HHHHHHCC----CE---EeCCHHHHHhcCCCCCEEE
Confidence            345589999999 9999999999999997  99999997622  22233211    11   235677888888   9999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCC
Q 017551           94 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNP  139 (369)
Q Consensus        94 i~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP  139 (369)
                      ++.  |.  +            .+.++++.+.... |+.+|+..||-
T Consensus        87 ~~v--p~--~------------~v~~vl~~l~~~l~~g~iiId~st~  117 (358)
T 4e21_A           87 LMV--PA--A------------VVDSMLQRMTPLLAANDIVIDGGNS  117 (358)
T ss_dssp             ECS--CG--G------------GHHHHHHHHGGGCCTTCEEEECSSC
T ss_pred             EeC--CH--H------------HHHHHHHHHHhhCCCCCEEEeCCCC
Confidence            984  21  1            2334445666554 67777776653

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=97.45  E-value=0.00018  Score=67.32  Aligned_cols=64  Identities=14%  Similarity=0.179  Sum_probs=48.4

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      +||+|||+ |.+|+.++..|+..++  +|++||++..+..  .+.+.    .+..   ++++.+++++||+||++.
T Consensus         2 ~~I~iiG~-G~mG~~~a~~l~~~G~--~V~~~dr~~~~~~--~~~~~----g~~~---~~~~~~~~~~advvi~~v   65 (287)
T 3pdu_A            2 TTYGFLGL-GIMGGPMAANLVRAGF--DVTVWNRNPAKCA--PLVAL----GARQ---ASSPAEVCAACDITIAML   65 (287)
T ss_dssp             CCEEEECC-STTHHHHHHHHHHHTC--CEEEECSSGGGGH--HHHHH----TCEE---CSCHHHHHHHCSEEEECC
T ss_pred             CeEEEEcc-CHHHHHHHHHHHHCCC--eEEEEcCCHHHHH--HHHHC----CCee---cCCHHHHHHcCCEEEEEc
Confidence            58999999 9999999999998887  8999999863221  12211    1222   356788899999999985

>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*

Probab=97.45  E-value=0.00021  Score=69.26  Aligned_cols=99  Identities=14%  Similarity=0.278  Sum_probs=62.8

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHH-HHhh-ccc------CCCeEEEEeCCCChhhhcCCCcEEE
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVT-ADIS-HMD------TGAVVRGFLGQPQLENALTGMDLVI   93 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~-~dL~-~~~------~~~~v~~~~~t~dl~~al~~ADiVi   93 (369)
                      ||+|||+ |.+|+.++..|+..+.  +|.++|.+...... .+.. ...      ....+..   ++++.++++++|+||
T Consensus        17 kI~iIG~-G~mG~~la~~L~~~G~--~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~aDvVi   90 (366)
T 1evy_A           17 KAVVFGS-GAFGTALAMVLSKKCR--EVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITF---TSDVEKAYNGAEIIL   90 (366)
T ss_dssp             EEEEECC-SHHHHHHHHHHTTTEE--EEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEE---ESCHHHHHTTCSSEE
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHHcCcccccccccccccceee---eCCHHHHHcCCCEEE
Confidence            9999999 9999999999998887  99999997522111 1110 000      1113443   346778899999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHH----HhhhC-C-CeEEEEecCCCCC
Q 017551           94 IPAGVPRKPGMTRDDLFNINAGIVRTLCEG----IAKCC-P-NATVNLISNPVNS  142 (369)
Q Consensus        94 i~ag~p~k~g~~r~~~~~~N~~i~~~i~~~----i~~~~-p-~a~viv~tNPv~~  142 (369)
                      ++.  |   .           ..+.+++..    +..+. | +.+++.++|-++.
T Consensus        91 lav--~---~-----------~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~  129 (366)
T 1evy_A           91 FVI--P---T-----------QFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIER  129 (366)
T ss_dssp             ECC--C---H-----------HHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCT
T ss_pred             ECC--C---h-----------HHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCC
Confidence            984  2   0           123334444    44332 5 6778888876543

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=97.44  E-value=0.00019  Score=66.91  Aligned_cols=107  Identities=15%  Similarity=0.058  Sum_probs=68.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCC-CCcEEEEEeCCCchhHHHHhhcccCCCeE-EEE-eCCCChhhhcCCCcEEEEcC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTGAVV-RGF-LGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~-~~~el~L~D~~~~~g~~~dL~~~~~~~~v-~~~-~~t~dl~~al~~ADiVii~a   96 (369)
                      .++|.|+||+|++|+.++..|...+ .  +|++++.+.......++....  ..+ ... ....++.++++++|+||..+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~--~V~~~~R~~~~~~~~~l~~~~--~~~~~~D~~d~~~l~~~~~~~d~vi~~a   80 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTF--KVRVVTRNPRKKAAKELRLQG--AEVVQGDQDDQVIMELALNGAYATFIVT   80 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSS--EEEEEESCTTSHHHHHHHHTT--CEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCc--eEEEEEcCCCCHHHHHHHHCC--CEEEEecCCCHHHHHHHHhcCCEEEEeC
Confidence            4699999999999999999988876 6  899999876322222333211  111 111 11134567899999999998


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      +.....      ....|....+.+++.+.+....- +++.|
T Consensus        81 ~~~~~~------~~~~~~~~~~~~~~aa~~~gv~~-iv~~S  114 (299)
T 2wm3_A           81 NYWESC------SQEQEVKQGKLLADLARRLGLHY-VVYSG  114 (299)
T ss_dssp             CHHHHT------CHHHHHHHHHHHHHHHHHHTCSE-EEECC
T ss_pred             CCCccc------cchHHHHHHHHHHHHHHHcCCCE-EEEEc
Confidence            642111      12456777888888887765433 44444

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=97.44  E-value=0.00047  Score=65.72  Aligned_cols=97  Identities=16%  Similarity=0.195  Sum_probs=70.9

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCC-----CCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC-C---CChhhhcCC---
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINP-----LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-Q---PQLENALTG---   88 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~-----~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~-t---~dl~~al~~---   88 (369)
                      |||.|+||+|++|++++..|+..+     .  +|+++|.+.....   +.    ...+..+.+ -   .++.+++++   
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~--~V~~~~r~~~~~~---~~----~~~~~~~~~Dl~d~~~~~~~~~~~~~   72 (364)
T 2v6g_A            2 SVALIVGVTGIIGNSLAEILPLADTPGGPW--KVYGVARRTRPAW---HE----DNPINYVQCDISDPDDSQAKLSPLTD   72 (364)
T ss_dssp             EEEEEETTTSHHHHHHHHHTTSTTCTTCSE--EEEEEESSCCCSC---CC----SSCCEEEECCTTSHHHHHHHHTTCTT
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCCCCce--EEEEEeCCCCccc---cc----cCceEEEEeecCCHHHHHHHHhcCCC
Confidence            689999999999999999998877     5  8999998762211   11    122332211 1   234567888   


Q ss_pred             CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC
Q 017551           89 MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP  129 (369)
Q Consensus        89 ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p  129 (369)
                      +|+||.+|+...   ....+....|+.....+++.+.+.++
T Consensus        73 ~d~vih~a~~~~---~~~~~~~~~n~~~~~~l~~a~~~~~~  110 (364)
T 2v6g_A           73 VTHVFYVTWANR---STEQENCEANSKMFRNVLDAVIPNCP  110 (364)
T ss_dssp             CCEEEECCCCCC---SSHHHHHHHHHHHHHHHHHHHTTTCT
T ss_pred             CCEEEECCCCCc---chHHHHHHHhHHHHHHHHHHHHHhcc
Confidence            999999998652   34667788999999999999998743

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=97.41  E-value=0.00013  Score=68.22  Aligned_cols=108  Identities=21%  Similarity=0.128  Sum_probs=69.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      ++||.|+||+|++|++++..|...+.  +|+.+|.+...  +....+.+......+..      ....+.++|+||.+|+
T Consensus         7 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~------~~~Dl~~~d~vi~~a~   78 (321)
T 3vps_A            7 KHRILITGGAGFIGGHLARALVASGE--EVTVLDDLRVPPMIPPEGTGKFLEKPVLEL------EERDLSDVRLVYHLAS   78 (321)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC--CEEEECCCSSCCSSCCTTSSEEECSCGGGC------CHHHHTTEEEEEECCC
T ss_pred             CCeEEEECCCChHHHHHHHHHHHCCC--EEEEEecCCcccccchhhhhhhccCCCeeE------EeCccccCCEEEECCc
Confidence            57999999999999999999999887  89999986521  11011111110111221      1344569999999988


Q ss_pred             CCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           98 VPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        98 ~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      .....  .....+.+. |+.....+++.+.+....- ++++|
T Consensus        79 ~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~-~v~~S  118 (321)
T 3vps_A           79 HKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPK-VVVGS  118 (321)
T ss_dssp             CCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCE-EEEEE
T ss_pred             cCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCe-EEEec
Confidence            64311  011223345 9999999999999887444 44443

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=97.41  E-value=0.00032  Score=64.04  Aligned_cols=115  Identities=15%  Similarity=0.102  Sum_probs=72.0

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHh-CCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC----
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKI-NPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT----   87 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~-~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~----   87 (369)
                      +.++|.|+||+|++|+.++..|+. .+.  +|+++|.+.  ......++....  .++..+. .-+|   +.++++    
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~   78 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSG--DVVLTARDVTRGQAAVQQLQAEG--LSPRFHQLDIDDLQSIRALRDFLRK   78 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSS--EEEEEESSHHHHHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCC--eEEEEeCChHHHHHHHHHHHhcC--CeeEEEECCCCCHHHHHHHHHHHHH
Confidence            456899999999999999999998 887  899999875  222333343221  2223221 1123   223333    


Q ss_pred             ---CCcEEEEcCCCCCCCC--CC----HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEec
Q 017551           88 ---GMDLVIIPAGVPRKPG--MT----RDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS  137 (369)
Q Consensus        88 ---~ADiVii~ag~p~k~g--~~----r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t  137 (369)
                         +.|+||..||......  .+    ....+..|+.....+.+.+..+. +.+.|+++|
T Consensus        79 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~s  138 (276)
T 1wma_A           79 EYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVS  138 (276)
T ss_dssp             HHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred             hcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEEC
Confidence               8999999998754321  11    23456778777777777776553 234555554

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=97.41  E-value=0.00018  Score=66.46  Aligned_cols=103  Identities=12%  Similarity=0.126  Sum_probs=67.3

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhC--CCCcEEEEEeCCCchhHHHHhhcccCCCeEEEE-eCCCChhhhcCCCcEEEEcCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKIN--PLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~--~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~-~~t~dl~~al~~ADiVii~ag   97 (369)
                      +||.|+||+|++|++++..|+..  +.  +|+.+|.+.....  ++..... ..+... ....++.++++++|+||..++
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~--~V~~~~r~~~~~~--~l~~~~~-~~~~~D~~d~~~l~~~~~~~d~vi~~a~   75 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPAS--QIIAIVRNVEKAS--TLADQGV-EVRHGDYNQPESLQKAFAGVSKLLFISG   75 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGG--GEEEEESCTTTTH--HHHHTTC-EEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCC--eEEEEEcCHHHHh--HHhhcCC-eEEEeccCCHHHHHHHHhcCCEEEEcCC
Confidence            48999999999999999999887  65  8999998752211  1221110 111111 111345678899999999987


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ..  ++  .    ..|+.....+++.+.+....- ++++|
T Consensus        76 ~~--~~--~----~~n~~~~~~l~~a~~~~~~~~-~v~~S  106 (287)
T 2jl1_A           76 PH--YD--N----TLLIVQHANVVKAARDAGVKH-IAYTG  106 (287)
T ss_dssp             CC--SC--H----HHHHHHHHHHHHHHHHTTCSE-EEEEE
T ss_pred             CC--cC--c----hHHHHHHHHHHHHHHHcCCCE-EEEEC
Confidence            53  11  1    457888888888888765444 44444

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=97.40  E-value=0.00033  Score=65.61  Aligned_cols=64  Identities=19%  Similarity=0.204  Sum_probs=48.0

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      |||+|||+ |.+|+.++..|...+.  +|.++|.+....  ..+...    .+..   ++++.++++++|+||++.
T Consensus         6 m~i~iiG~-G~~G~~~a~~l~~~g~--~V~~~~~~~~~~--~~~~~~----g~~~---~~~~~~~~~~~D~vi~~v   69 (299)
T 1vpd_A            6 MKVGFIGL-GIMGKPMSKNLLKAGY--SLVVSDRNPEAI--ADVIAA----GAET---ASTAKAIAEQCDVIITML   69 (299)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTC--EEEEECSCHHHH--HHHHHT----TCEE---CSSHHHHHHHCSEEEECC
T ss_pred             ceEEEECc-hHHHHHHHHHHHhCCC--EEEEEeCCHHHH--HHHHHC----CCee---cCCHHHHHhCCCEEEEEC
Confidence            69999998 9999999999998887  899999975221  112221    1222   356778899999999985

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=97.40  E-value=0.00034  Score=66.27  Aligned_cols=94  Identities=14%  Similarity=0.114  Sum_probs=62.0

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      ..+||+|||+ |.+|+.++..|...+.  +|.++|.+.....  .+...  .  +..   .+++.++++++|+||++...
T Consensus        29 ~~~~I~iIG~-G~mG~~~a~~l~~~g~--~V~~~~~~~~~~~--~~~~~--g--~~~---~~~~~~~~~~~DvVi~av~~   96 (316)
T 2uyy_A           29 TDKKIGFLGL-GLMGSGIVSNLLKMGH--TVTVWNRTAEKCD--LFIQE--G--ARL---GRTPAEVVSTCDITFACVSD   96 (316)
T ss_dssp             CSSCEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSGGGGH--HHHHT--T--CEE---CSCHHHHHHHCSEEEECCSS
T ss_pred             CCCeEEEEcc-cHHHHHHHHHHHhCCC--EEEEEeCCHHHHH--HHHHc--C--CEE---cCCHHHHHhcCCEEEEeCCC
Confidence            3479999999 9999999999998887  8999999863221  12211  1  122   34567888999999998521


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHH----hhhCCCeEEEEecCC
Q 017551           99 PRKPGMTRDDLFNINAGIVRTLCEGI----AKCCPNATVNLISNP  139 (369)
Q Consensus        99 p~k~g~~r~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tNP  139 (369)
                      |               ..++++...+    ....|+.+++..+|-
T Consensus        97 ~---------------~~~~~v~~~~~~~~~~l~~~~~vv~~s~~  126 (316)
T 2uyy_A           97 P---------------KAAKDLVLGPSGVLQGIRPGKCYVDMSTV  126 (316)
T ss_dssp             H---------------HHHHHHHHSTTCGGGGCCTTCEEEECSCC
T ss_pred             H---------------HHHHHHHcCchhHhhcCCCCCEEEECCCC
Confidence            1               1133344332    223577777778873

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=97.40  E-value=0.0003  Score=64.58  Aligned_cols=112  Identities=18%  Similarity=0.273  Sum_probs=69.4

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT------   87 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~------   87 (369)
                      .+++.|+||+|++|..++..|+..+.  +|++.|.+..  .....++.     ..+..+. .-+|   .+++++      
T Consensus         8 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~   80 (259)
T 4e6p_A            8 GKSALITGSARGIGRAFAEAYVREGA--TVAIADIDIERARQAAAEIG-----PAAYAVQMDVTRQDSIDAAIAATVEHA   80 (259)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHC-----TTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhC-----CCceEEEeeCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999998  8999999762  22223332     1222221 1122   223333      


Q ss_pred             -CCcEEEEcCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 017551           88 -GMDLVIIPAGVPRKP---GMT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        88 -~ADiVii~ag~p~k~---g~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                       +.|++|..||.....   ..+   ....+..|+.    +.+.+.+.+.+..+.+.|+++|-
T Consensus        81 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS  142 (259)
T 4e6p_A           81 GGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMAS  142 (259)
T ss_dssp             SSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECC
Confidence             899999999974321   122   2344556654    44445555555554677777754

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=97.39  E-value=0.00043  Score=64.83  Aligned_cols=66  Identities=14%  Similarity=0.336  Sum_probs=48.8

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      +++||+|||+ |.+|+.++..|...+.  +|+++|.+...  ...+.+.    .+..   .+++.++++++|+||++.
T Consensus         3 ~~~~i~iiG~-G~~G~~~a~~l~~~g~--~V~~~~~~~~~--~~~~~~~----g~~~---~~~~~~~~~~~D~vi~~v   68 (301)
T 3cky_A            3 KSIKIGFIGL-GAMGKPMAINLLKEGV--TVYAFDLMEAN--VAAVVAQ----GAQA---CENNQKVAAASDIIFTSL   68 (301)
T ss_dssp             -CCEEEEECC-CTTHHHHHHHHHHTTC--EEEEECSSHHH--HHHHHTT----TCEE---CSSHHHHHHHCSEEEECC
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHHCCC--eEEEEeCCHHH--HHHHHHC----CCee---cCCHHHHHhCCCEEEEEC
Confidence            4579999999 9999999999998887  89999987522  1222221    1222   346778889999999984

>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}

Probab=97.39  E-value=0.0005  Score=65.27  Aligned_cols=122  Identities=10%  Similarity=0.106  Sum_probs=72.0

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchh-HHHHhh-cccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG-VTADIS-HMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g-~~~dL~-~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      +|||+|||+ |.+|+.++..|. .+.  +|.+++.+.... ...+-. .............+.+ .++..++|+||++. 
T Consensus         2 ~mkI~IiGa-Ga~G~~~a~~L~-~g~--~V~~~~r~~~~~~~l~~~G~~~~~~~~~~~~~~~~~-~~~~~~~D~vilav-   75 (307)
T 3ego_A            2 SLKIGIIGG-GSVGLLCAYYLS-LYH--DVTVVTRRQEQAAAIQSEGIRLYKGGEEFRADCSAD-TSINSDFDLLVVTV-   75 (307)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHH-TTS--EEEEECSCHHHHHHHHHHCEEEEETTEEEEECCEEE-SSCCSCCSEEEECC-
T ss_pred             CCEEEEECC-CHHHHHHHHHHh-cCC--ceEEEECCHHHHHHHHhCCceEecCCCeeccccccc-ccccCCCCEEEEEe-
Confidence            379999999 999999999999 776  999999875211 111100 0000000000000111 24578999999985 


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcH
Q 017551           98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDV  170 (369)
Q Consensus        98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~  170 (369)
                         |+.            -+.++++.+....++. |+.+.|-++..     +.+.+.  +|.++|++- +....
T Consensus        76 ---K~~------------~~~~~l~~l~~~~~~~-ivs~~nGi~~~-----e~l~~~--~~~~~vl~g~~~~~a  126 (307)
T 3ego_A           76 ---KQH------------QLQSVFSSLERIGKTN-ILFLQNGMGHI-----HDLKDW--HVGHSIYVGIVEHGA  126 (307)
T ss_dssp             ---CGG------------GHHHHHHHTTSSCCCE-EEECCSSSHHH-----HHHHTC--CCSCEEEEEEECCEE
T ss_pred             ---CHH------------HHHHHHHHhhcCCCCe-EEEecCCccHH-----HHHHHh--CCCCcEEEEEEeece
Confidence               211            1334556666555666 88888887653     233443  677888754 65543

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=97.39  E-value=0.00016  Score=67.72  Aligned_cols=111  Identities=17%  Similarity=0.070  Sum_probs=70.3

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEE-eCCCChhhhcC--CCcEEEEcCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQLENALT--GMDLVIIPAG   97 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~-~~t~dl~~al~--~ADiVii~ag   97 (369)
                      |||.|+||+|++|+.++..|+..+.  +|+++|...... ...+.. . ...+... +...++.++++  ++|+||..|+
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~--~V~~~~r~~~~~-~~~~~~-~-~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~   75 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGL--EVAVLDNLATGK-RENVPK-G-VPFFRVDLRDKEGVERAFREFRPTHVSHQAA   75 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTC--EEEEECCCSSCC-GGGSCT-T-CCEECCCTTCHHHHHHHHHHHCCSEEEECCS
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCC--EEEEEECCCcCc-hhhccc-C-eEEEECCCCCHHHHHHHHHhcCCCEEEECcc
Confidence            6899999999999999999999887  999998743110 011110 0 0011111 00122445666  8999999987


Q ss_pred             CCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           98 VPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        98 ~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      .....  .......+..|+.....+++.+.+....- ++++|
T Consensus        76 ~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~-iv~~S  116 (311)
T 2p5y_A           76 QASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEK-LVFAS  116 (311)
T ss_dssp             CCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSE-EEEEE
T ss_pred             ccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCE-EEEeC
Confidence            64311  12345567889998999999888765444 44443

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=97.38  E-value=0.00069  Score=64.42  Aligned_cols=69  Identities=12%  Similarity=0.179  Sum_probs=48.0

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      +.+||+|||+ |.+|+.++..|+..++ .+|++||++........+...    .+..   .+++.+++++||+||++.
T Consensus        23 ~~~~I~iIG~-G~mG~~~A~~L~~~G~-~~V~~~dr~~~~~~~~~~~~~----g~~~---~~~~~e~~~~aDvVi~~v   91 (312)
T 3qsg_A           23 NAMKLGFIGF-GEAASAIASGLRQAGA-IDMAAYDAASAESWRPRAEEL----GVSC---KASVAEVAGECDVIFSLV   91 (312)
T ss_dssp             --CEEEEECC-SHHHHHHHHHHHHHSC-CEEEEECSSCHHHHHHHHHHT----TCEE---CSCHHHHHHHCSEEEECS
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHHCCC-CeEEEEcCCCCHHHHHHHHHC----CCEE---eCCHHHHHhcCCEEEEec
Confidence            3579999999 9999999999988874 489999997201111112221    1222   346778899999999985

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=97.38  E-value=0.0025  Score=57.95  Aligned_cols=115  Identities=18%  Similarity=0.205  Sum_probs=70.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcE-EEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCC----hhhhc-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSV-LHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ----LENAL-------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~e-l~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~d----l~~al-------   86 (369)
                      .++|.|+||+|++|..++..|+..+.  + |+++|.+.......++.......++..+. .-+|    .++++       
T Consensus         5 ~k~vlVtGas~gIG~~~a~~l~~~G~--~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (254)
T 1sby_A            5 NKNVIFVAALGGIGLDTSRELVKRNL--KNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTCC--SEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCC--cEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhc
Confidence            46899999999999999999999886  5 89999876322223333221123444332 1122    22222       


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhh----hC--CCeEEEEecC
Q 017551           87 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAK----CC--PNATVNLISN  138 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~----~~--p~a~viv~tN  138 (369)
                      .+.|+||..||...  .......+..|+.-...+.+.+..    ..  +.+.|+++|-
T Consensus        83 g~id~lv~~Ag~~~--~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS  138 (254)
T 1sby_A           83 KTVDILINGAGILD--DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICS  138 (254)
T ss_dssp             SCCCEEEECCCCCC--TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECC
T ss_pred             CCCCEEEECCccCC--HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECc
Confidence            37899999998742  234555667776655555554433    21  2466777754

>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}

Probab=97.37  E-value=0.00032  Score=65.47  Aligned_cols=64  Identities=16%  Similarity=0.278  Sum_probs=46.6

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      +|||+|||+ |.+|+.++..|...+.  +|.++| +.....  .+....    +.   ..+++.++++++|+||++.
T Consensus         3 ~m~i~iiG~-G~~G~~~a~~l~~~g~--~V~~~~-~~~~~~--~~~~~g----~~---~~~~~~~~~~~~D~vi~~v   66 (295)
T 1yb4_A            3 AMKLGFIGL-GIMGSPMAINLARAGH--QLHVTT-IGPVAD--ELLSLG----AV---NVETARQVTEFADIIFIMV   66 (295)
T ss_dssp             -CEEEECCC-STTHHHHHHHHHHTTC--EEEECC-SSCCCH--HHHTTT----CB---CCSSHHHHHHTCSEEEECC
T ss_pred             CCEEEEEcc-CHHHHHHHHHHHhCCC--EEEEEc-CHHHHH--HHHHcC----Cc---ccCCHHHHHhcCCEEEEEC
Confidence            479999999 9999999999998887  999999 762211  122111    11   1356778899999999984

>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*

Probab=97.36  E-value=0.00097  Score=67.44  Aligned_cols=112  Identities=6%  Similarity=0.087  Sum_probs=70.7

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCC---CcEEEEc
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTG---MDLVIIP   95 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~---ADiVii~   95 (369)
                      .++||+|||+ |.+|++++..|+..+.  +|.+||++..+.  .++........+..   ++++++++++   +|+||++
T Consensus        14 ~~~~IgvIGl-G~MG~~lA~~La~~G~--~V~v~~r~~~~~--~~l~~~~~~~gi~~---~~s~~e~v~~l~~aDvVil~   85 (480)
T 2zyd_A           14 SKQQIGVVGM-AVMGRNLALNIESRGY--TVSIFNRSREKT--EEVIAENPGKKLVP---YYTVKEFVESLETPRRILLM   85 (480)
T ss_dssp             -CBSEEEECC-SHHHHHHHHHHHTTTC--CEEEECSSHHHH--HHHHHHSTTSCEEE---CSSHHHHHHTBCSSCEEEEC
T ss_pred             CCCeEEEEcc-HHHHHHHHHHHHhCCC--eEEEEeCCHHHH--HHHHhhCCCCCeEE---eCCHHHHHhCCCCCCEEEEE
Confidence            3469999999 9999999999999987  899999975221  12221100113443   4567777776   9999998


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCChhHHHHHHHHH
Q 017551           96 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKK  153 (369)
Q Consensus        96 ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~i~ae~~~~  153 (369)
                      ...    +.           .+.++++.+..+. |+.+||..+|-....+.-.++.+..
T Consensus        86 Vp~----~~-----------~v~~vl~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~  129 (480)
T 2zyd_A           86 VKA----GA-----------GTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSA  129 (480)
T ss_dssp             SCS----SS-----------HHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHH
T ss_pred             CCC----HH-----------HHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHH
Confidence            522    11           1334445666555 6778888888764433323344443

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=97.36  E-value=0.00076  Score=61.34  Aligned_cols=115  Identities=17%  Similarity=0.209  Sum_probs=69.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT------   87 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~------   87 (369)
                      .++|.|+||+|++|..++..|+..+.  +|+++|.+..  .....++...  ..++..+. .-+|   +.++++      
T Consensus        13 ~k~vlItGasggiG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (260)
T 3awd_A           13 NRVAIVTGGAQNIGLACVTALAEAGA--RVIIADLDEAMATKAVEDLRME--GHDVSSVVMDVTNTESVQNAVRSVHEQE   88 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999987  9999998762  2223334321  12343332 1223   223333      


Q ss_pred             -CCcEEEEcCCCCC--CC--CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 017551           88 -GMDLVIIPAGVPR--KP--GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  138 (369)
Q Consensus        88 -~ADiVii~ag~p~--k~--g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN  138 (369)
                       +.|+||..||...  .+  ..+.   ...+..|+.....+.+.+..+   ...+.++++|.
T Consensus        89 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS  150 (260)
T 3awd_A           89 GRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGS  150 (260)
T ss_dssp             SCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEec
Confidence             7899999998654  11  1222   344566766555555544432   23566666653

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=97.36  E-value=0.00017  Score=57.29  Aligned_cols=71  Identities=28%  Similarity=0.418  Sum_probs=48.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCC-CCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe--CCCChhhhcCCCcEEEEcC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL--GQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~-~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~--~t~dl~~al~~ADiVii~a   96 (369)
                      .+||+|+|+ |++|+.++..|...+ .  +|+++|.+......  +.+.  ........  ...++.++++++|+||.++
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~--~v~~~~r~~~~~~~--~~~~--~~~~~~~d~~~~~~~~~~~~~~d~vi~~~   77 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNY--SVTVADHDLAALAV--LNRM--GVATKQVDAKDEAGLAKALGGFDAVISAA   77 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSE--EEEEEESCHHHHHH--HHTT--TCEEEECCTTCHHHHHHHTTTCSEEEECS
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCc--eEEEEeCCHHHHHH--HHhC--CCcEEEecCCCHHHHHHHHcCCCEEEECC
Confidence            469999999 999999999999888 5  89999997622111  2211  11111111  1134556789999999997


Q ss_pred             C
Q 017551           97 G   97 (369)
Q Consensus        97 g   97 (369)
                      +
T Consensus        78 ~   78 (118)
T 3ic5_A           78 P   78 (118)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=97.36  E-value=0.0027  Score=58.21  Aligned_cols=115  Identities=17%  Similarity=0.130  Sum_probs=72.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-------   86 (369)
                      .++|.|+||+|++|..++..|+..+.  +|++.|.+..  .....++........+..+. .-+|   +.+++       
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            7 GKVALVTGAAQGIGRAFAEALLLKGA--KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            35899999999999999999999987  8999998762  22223333211112333322 1223   22233       


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHHH----HHHHHHHHHhhhC--CCeEEEEecC
Q 017551           87 TGMDLVIIPAGVPRKPGMTRDDLFNINAG----IVRTLCEGIAKCC--PNATVNLISN  138 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~g~~r~~~~~~N~~----i~~~i~~~i~~~~--p~a~viv~tN  138 (369)
                      ...|+||..||...  .......+..|+.    ..+.+.+.+.+..  +.+.|+++|.
T Consensus        85 g~id~lv~~Ag~~~--~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS  140 (267)
T 2gdz_A           85 GRLDILVNNAGVNN--EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSS  140 (267)
T ss_dssp             SCCCEEEECCCCCC--SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECC
T ss_pred             CCCCEEEECCCCCC--hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCC
Confidence            35799999998753  2334556667755    5666677776543  2567777764

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=97.35  E-value=0.00064  Score=65.06  Aligned_cols=98  Identities=16%  Similarity=0.145  Sum_probs=59.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhH-HHHhhccc---C-CC-eEEEEeCCCChhhhcCCCcEEE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV-TADISHMD---T-GA-VVRGFLGQPQLENALTGMDLVI   93 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~-~~dL~~~~---~-~~-~v~~~~~t~dl~~al~~ADiVi   93 (369)
                      .|||+|||+ |.+|+.++..|...+.  +|.++|.+..... ..+.....   . .. .......+++++++++++|+||
T Consensus         4 ~mki~iiG~-G~~G~~~a~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi   80 (359)
T 1bg6_A            4 SKTYAVLGL-GNGGHAFAAYLALKGQ--SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVIL   80 (359)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEE
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEE
Confidence            479999999 9999999999998887  8999998752211 11110000   0 00 0000001356778899999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEe
Q 017551           94 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLI  136 (369)
Q Consensus        94 i~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~  136 (369)
                      ++...+.                ..++++.+..+. ++.+++..
T Consensus        81 ~~v~~~~----------------~~~~~~~l~~~l~~~~~vv~~  108 (359)
T 1bg6_A           81 IVVPAIH----------------HASIAANIASYISEGQLIILN  108 (359)
T ss_dssp             ECSCGGG----------------HHHHHHHHGGGCCTTCEEEES
T ss_pred             EeCCchH----------------HHHHHHHHHHhCCCCCEEEEc
Confidence            9852220                134556666655 45655544

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=97.35  E-value=0.00055  Score=62.01  Aligned_cols=115  Identities=18%  Similarity=0.214  Sum_probs=70.2

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC-----
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT-----   87 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~-----   87 (369)
                      +.++|.|+||+|++|..++..|+..+.  +|+++|.+..  .....++...  ..++..+. .-+|   ++++++     
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   85 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGA--SVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC--EEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHHh--CCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            346899999999999999999999987  8999999762  2223333321  12333322 1122   233333     


Q ss_pred             --CCcEEEEcCCCCCCC--CCC---HHHHHHHHHHHHHHHHHHH----hhhCCCeEEEEecC
Q 017551           88 --GMDLVIIPAGVPRKP--GMT---RDDLFNINAGIVRTLCEGI----AKCCPNATVNLISN  138 (369)
Q Consensus        88 --~ADiVii~ag~p~k~--g~~---r~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tN  138 (369)
                        +.|+||..||.....  ..+   ....+..|+.....+.+.+    .+. ..+.++++|.
T Consensus        86 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~iv~~sS  146 (255)
T 1fmc_A           86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKN-GGGVILTITS  146 (255)
T ss_dssp             HSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred             cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcc
Confidence              899999999864321  222   2345566766655555444    333 3456666653

>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A

Probab=97.35  E-value=0.00075  Score=68.35  Aligned_cols=99  Identities=18%  Similarity=0.207  Sum_probs=64.4

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcc-cCCCeEEEEeCCCChhhhcC---CCcEEEE
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM-DTGAVVRGFLGQPQLENALT---GMDLVII   94 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~-~~~~~v~~~~~t~dl~~al~---~ADiVii   94 (369)
                      ..+||+|||. |.+|++++..|+..++  +|++||++..+.  .++... .....+..   +++++++++   ++|+||+
T Consensus         3 ~~~kIgiIGl-G~MG~~lA~~L~~~G~--~V~v~dr~~~~~--~~l~~~g~~g~~i~~---~~s~~e~v~~l~~aDvVil   74 (484)
T 4gwg_A            3 AQADIALIGL-AVMGQNLILNMNDHGF--VVCAFNRTVSKV--DDFLANEAKGTKVVG---AQSLKEMVSKLKKPRRIIL   74 (484)
T ss_dssp             CCBSEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSTHHH--HHHHHTTTTTSSCEE---CSSHHHHHHTBCSSCEEEE
T ss_pred             CCCEEEEECh-hHHHHHHHHHHHHCCC--EEEEEeCCHHHH--HHHHhcccCCCceec---cCCHHHHHhhccCCCEEEE
Confidence            3479999999 9999999999999998  999999986322  222221 11123332   345666554   6999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCC
Q 017551           95 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPV  140 (369)
Q Consensus        95 ~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv  140 (369)
                      +...    +           +.+.++++.+..+. |+.+||..||-.
T Consensus        75 ~Vp~----~-----------~~v~~vl~~l~~~L~~g~iIId~st~~  106 (484)
T 4gwg_A           75 LVKA----G-----------QAVDDFIEKLVPLLDTGDIIIDGGNSE  106 (484)
T ss_dssp             CSCS----S-----------HHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred             ecCC----h-----------HHHHHHHHHHHHhcCCCCEEEEcCCCC
Confidence            8421    1           12334445565554 677777777654

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=97.33  E-value=0.00033  Score=64.14  Aligned_cols=96  Identities=13%  Similarity=0.176  Sum_probs=60.8

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCC--CcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPL--VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~--~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      +||+|||+ |.+|+.++..|...++  ..+|.++|++..+.  .++....   .+..   .++..+++++||+||++.  
T Consensus         3 ~~i~iIG~-G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~--~~~~~~~---g~~~---~~~~~e~~~~aDvVilav--   71 (247)
T 3gt0_A            3 KQIGFIGC-GNMGMAMIGGMINKNIVSSNQIICSDLNTANL--KNASEKY---GLTT---TTDNNEVAKNADILILSI--   71 (247)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTSSCGGGEEEECSCHHHH--HHHHHHH---CCEE---CSCHHHHHHHCSEEEECS--
T ss_pred             CeEEEECc-cHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHH--HHHHHHh---CCEE---eCChHHHHHhCCEEEEEe--
Confidence            69999999 9999999999998875  35899999986221  1222110   1222   356778899999999986  


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCC
Q 017551           99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVN  141 (369)
Q Consensus        99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~  141 (369)
                      |  +.            .+.++.+.+..+. |+.+++..++-+.
T Consensus        72 ~--~~------------~~~~v~~~l~~~l~~~~~vvs~~~gi~  101 (247)
T 3gt0_A           72 K--PD------------LYASIINEIKEIIKNDAIIVTIAAGKS  101 (247)
T ss_dssp             C--TT------------THHHHC---CCSSCTTCEEEECSCCSC
T ss_pred             C--HH------------HHHHHHHHHHhhcCCCCEEEEecCCCC
Confidence            2  11            1445556666655 4555554444443

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=97.33  E-value=0.00066  Score=64.80  Aligned_cols=66  Identities=18%  Similarity=0.169  Sum_probs=47.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCC-CCcEEEEEeCCCc-----hhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNT-----PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVI   93 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~-~~~el~L~D~~~~-----~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVi   93 (369)
                      .+||+|||+ |.+|++++..|+..+ .  +|.+||++..     ......+...  ..   .   ++++.+++++||+||
T Consensus        24 ~m~IgvIG~-G~mG~~lA~~L~~~G~~--~V~~~dr~~~~~~~~~~~~~~~~~~--g~---~---~~s~~e~~~~aDvVi   92 (317)
T 4ezb_A           24 MTTIAFIGF-GEAAQSIAGGLGGRNAA--RLAAYDLRFNDPAASGALRARAAEL--GV---E---PLDDVAGIACADVVL   92 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCS--EEEEECGGGGCTTTHHHHHHHHHHT--TC---E---EESSGGGGGGCSEEE
T ss_pred             CCeEEEECc-cHHHHHHHHHHHHcCCC--eEEEEeCCCccccchHHHHHHHHHC--CC---C---CCCHHHHHhcCCEEE
Confidence            369999999 999999999999988 7  9999999751     1222222221  11   1   114568899999999


Q ss_pred             EcC
Q 017551           94 IPA   96 (369)
Q Consensus        94 i~a   96 (369)
                      ++.
T Consensus        93 ~av   95 (317)
T 4ezb_A           93 SLV   95 (317)
T ss_dssp             ECC
T ss_pred             Eec
Confidence            985

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=97.32  E-value=6.9e-05  Score=69.50  Aligned_cols=104  Identities=12%  Similarity=0.064  Sum_probs=66.0

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEE-eCCCChhhhcCC-CcEEEEcCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQLENALTG-MDLVIIPAG   97 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~-~~t~dl~~al~~-ADiVii~ag   97 (369)
                      .|||.|+|| |++|+.++..|...+.  +|+.++.+...     +.. . ...+... ....++.+++++ +|+||.+|+
T Consensus         3 ~~~ilVtGa-G~iG~~l~~~L~~~g~--~V~~~~r~~~~-----~~~-~-~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~   72 (286)
T 3gpi_A            3 LSKILIAGC-GDLGLELARRLTAQGH--EVTGLRRSAQP-----MPA-G-VQTLIADVTRPDTLASIVHLRPEILVYCVA   72 (286)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTC--CEEEEECTTSC-----CCT-T-CCEEECCTTCGGGCTTGGGGCCSEEEECHH
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCccc-----ccc-C-CceEEccCCChHHHHHhhcCCCCEEEEeCC
Confidence            469999996 9999999999999987  89999987521     100 0 0111111 112234456777 999999986


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ...   .........|+.....+++.+.+....- ++++|
T Consensus        73 ~~~---~~~~~~~~~n~~~~~~ll~a~~~~~~~~-~v~~S  108 (286)
T 3gpi_A           73 ASE---YSDEHYRLSYVEGLRNTLSALEGAPLQH-VFFVS  108 (286)
T ss_dssp             HHH---HC-----CCSHHHHHHHHHHTTTSCCCE-EEEEE
T ss_pred             CCC---CCHHHHHHHHHHHHHHHHHHHhhCCCCE-EEEEc
Confidence            532   2233445678888999999988754443 44444

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.32  E-value=0.001  Score=57.65  Aligned_cols=135  Identities=14%  Similarity=0.062  Sum_probs=77.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhC-CCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCC---hhhh--cCCCcEEE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ---LENA--LTGMDLVI   93 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~-~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~d---l~~a--l~~ADiVi   93 (369)
                      .++|+|+|+ |.+|+.++..|... +.  +++++|.+....  ..+....  ..+.. ...++   +.++  ++++|+||
T Consensus        39 ~~~v~IiG~-G~~G~~~a~~L~~~~g~--~V~vid~~~~~~--~~~~~~g--~~~~~-gd~~~~~~l~~~~~~~~ad~vi  110 (183)
T 3c85_A           39 HAQVLILGM-GRIGTGAYDELRARYGK--ISLGIEIREEAA--QQHRSEG--RNVIS-GDATDPDFWERILDTGHVKLVL  110 (183)
T ss_dssp             TCSEEEECC-SHHHHHHHHHHHHHHCS--CEEEEESCHHHH--HHHHHTT--CCEEE-CCTTCHHHHHTBCSCCCCCEEE
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhccCC--eEEEEECCHHHH--HHHHHCC--CCEEE-cCCCCHHHHHhccCCCCCCEEE
Confidence            469999998 99999999999887 87  899999986221  1122211  12111 11122   3444  78999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEechhcHHHH
Q 017551           94 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRA  173 (369)
Q Consensus        94 i~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t~Ld~~R~  173 (369)
                      ++.+.+           ..|.    .++..+++.+|+..++..+|-.+.     .+.+++.+   .+.++.-...-..++
T Consensus       111 ~~~~~~-----------~~~~----~~~~~~~~~~~~~~ii~~~~~~~~-----~~~l~~~G---~~~vi~p~~~~a~~l  167 (183)
T 3c85_A          111 LAMPHH-----------QGNQ----TALEQLQRRNYKGQIAAIAEYPDQ-----LEGLLESG---VDAAFNIYSEAGSGF  167 (183)
T ss_dssp             ECCSSH-----------HHHH----HHHHHHHHTTCCSEEEEEESSHHH-----HHHHHHHT---CSEEEEHHHHHHHHH
T ss_pred             EeCCCh-----------HHHH----HHHHHHHHHCCCCEEEEEECCHHH-----HHHHHHcC---CCEEEchHHHHHHHH
Confidence            975311           2333    333456666777766665543211     23345543   355665543333445


Q ss_pred             HHHHHHHhCCCC
Q 017551          174 NTFVAEVLGLDP  185 (369)
Q Consensus       174 ~~~la~~lgv~~  185 (369)
                      ...+.+.++.+-
T Consensus       168 ~~~~~~~~~~~~  179 (183)
T 3c85_A          168 ARHVCKQLEPQF  179 (183)
T ss_dssp             HHHHHHHHCCCC
T ss_pred             HHHHHHhcCCcc
Confidence            555556666543

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=97.32  E-value=0.00033  Score=64.91  Aligned_cols=104  Identities=13%  Similarity=0.073  Sum_probs=67.1

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCC--CcEEEEc
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTG--MDLVIIP   95 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~--ADiVii~   95 (369)
                      .++|||.|+||+|++|+.++..|...+.........+   .....|+.+            ..++.+++++  +|+||.+
T Consensus         4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~~~~---~~~~~D~~d------------~~~~~~~~~~~~~d~Vih~   68 (319)
T 4b8w_A            4 FQSMRILVTGGSGLVGKAIQKVVADGAGLPGEDWVFV---SSKDADLTD------------TAQTRALFEKVQPTHVIHL   68 (319)
T ss_dssp             CCCCEEEEETCSSHHHHHHHHHHHTTTCCTTCEEEEC---CTTTCCTTS------------HHHHHHHHHHSCCSEEEEC
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhcCCccccccccc---CceecccCC------------HHHHHHHHhhcCCCEEEEC
Confidence            4568999999999999999999998875100000000   001112221            1234566666  9999999


Q ss_pred             CCCCCC---CCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           96 AGVPRK---PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        96 ag~p~k---~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      |+....   ......+.+..|+.....+++.+.+...+- ++++|
T Consensus        69 A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~-~v~~S  112 (319)
T 4b8w_A           69 AAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARK-VVSCL  112 (319)
T ss_dssp             CCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSE-EEEEC
T ss_pred             ceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCe-EEEEc
Confidence            987421   123456778999999999999998876544 44443

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=97.32  E-value=0.00065  Score=66.85  Aligned_cols=113  Identities=12%  Similarity=0.068  Sum_probs=70.8

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchh-----HHHHhhcc-------cCCCeEEEEeC----CCCh
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG-----VTADISHM-------DTGAVVRGFLG----QPQL   82 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g-----~~~dL~~~-------~~~~~v~~~~~----t~dl   82 (369)
                      ..++|.|+||+|++|+.++..|...+.  +|++++.+....     ....+...       .....+..+.+    ..++
T Consensus        68 ~~~~vlVTGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l  145 (427)
T 4f6c_A           68 PLGNTLLTGATGFLGAYLIEALQGYSH--RIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV  145 (427)
T ss_dssp             CCEEEEEECTTSHHHHHHHHHHTTTEE--EEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHcCCC--EEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence            356999999999999999999976666  899999876211     11111110       00123333221    1223


Q ss_pred             hhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           83 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        83 ~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      . ++.++|+||.+|+..... .........|+.....+++.+.+  ....++++|
T Consensus       146 ~-~~~~~d~Vih~A~~~~~~-~~~~~~~~~Nv~g~~~l~~aa~~--~~~~~v~~S  196 (427)
T 4f6c_A          146 V-LPENMDTIIHAGARTDHF-GDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVS  196 (427)
T ss_dssp             C-CSSCCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHH--TTCEEEEEE
T ss_pred             C-CcCCCCEEEECCcccCCC-CCHHHHHHHHHHHHHHHHHHHHh--cCCcEEEEC
Confidence            2 678999999999865322 34456678899999999999988  334455554

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=97.32  E-value=0.00036  Score=67.16  Aligned_cols=115  Identities=11%  Similarity=0.028  Sum_probs=71.9

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch---hHHHHhhccc---CCCeEEEEeC-CCC---hhhhcCC--
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP---GVTADISHMD---TGAVVRGFLG-QPQ---LENALTG--   88 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~---g~~~dL~~~~---~~~~v~~~~~-t~d---l~~al~~--   88 (369)
                      ++|.|+||+|++|+.++..|+..+.  +|+++|.+...   ....++....   ....+..+.+ -+|   +.+++++  
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~  102 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGY--EVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVK  102 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHC
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCC--EEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcC
Confidence            4899999999999999999999887  99999986521   1111111100   0123333321 122   3445664  


Q ss_pred             CcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCC--CeEEEEec
Q 017551           89 MDLVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCP--NATVNLIS  137 (369)
Q Consensus        89 ADiVii~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p--~a~viv~t  137 (369)
                      .|+||.+||.....  .......+..|+.....+++.+.+...  ...+|++|
T Consensus       103 ~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~S  155 (375)
T 1t2a_A          103 PTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQAS  155 (375)
T ss_dssp             CSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEE
T ss_pred             CCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEec
Confidence            59999999864311  123455677888889999998887653  14555554

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=97.30  E-value=0.00095  Score=62.99  Aligned_cols=75  Identities=20%  Similarity=0.307  Sum_probs=55.1

Q ss_pred             CEEEEEc-CCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCC
Q 017551           21 FKVAILG-AAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP   99 (369)
Q Consensus        21 ~KI~IiG-A~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p   99 (369)
                      +||+||| + |.+|..++..|+..++  +|.++|.+..                      ++..+++++||+||++.  |
T Consensus        22 ~~I~iIGg~-G~mG~~la~~l~~~G~--~V~~~~~~~~----------------------~~~~~~~~~aDvVilav--p   74 (298)
T 2pv7_A           22 HKIVIVGGY-GKLGGLFARYLRASGY--PISILDREDW----------------------AVAESILANADVVIVSV--P   74 (298)
T ss_dssp             CCEEEETTT-SHHHHHHHHHHHTTTC--CEEEECTTCG----------------------GGHHHHHTTCSEEEECS--C
T ss_pred             CEEEEEcCC-CHHHHHHHHHHHhCCC--eEEEEECCcc----------------------cCHHHHhcCCCEEEEeC--C
Confidence            4899999 7 9999999999999887  8999998642                      13457889999999985  2


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEe
Q 017551          100 RKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLI  136 (369)
Q Consensus       100 ~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~  136 (369)
                      .  .            .+.++++.+..+. |+++|+.+
T Consensus        75 ~--~------------~~~~vl~~l~~~l~~~~iv~~~   98 (298)
T 2pv7_A           75 I--N------------LTLETIERLKPYLTENMLLADL   98 (298)
T ss_dssp             G--G------------GHHHHHHHHGGGCCTTSEEEEC
T ss_pred             H--H------------HHHHHHHHHHhhcCCCcEEEEC
Confidence            1  1            1445556666554 56655544

>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*

Probab=97.30  E-value=0.0017  Score=64.82  Aligned_cols=111  Identities=14%  Similarity=0.202  Sum_probs=69.3

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhccc----------------CCCeEEEEeCCCChh
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD----------------TGAVVRGFLGQPQLE   83 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~----------------~~~~v~~~~~t~dl~   83 (369)
                      ..|.+|||. |++|.++|..|+..|+  +|+.||+++.+  +..|....                ...++...   +|  
T Consensus        11 ~~~~~ViGl-GyvGlp~A~~La~~G~--~V~~~D~~~~k--v~~L~~g~~pi~epgl~~ll~~~~~~g~l~~t---td--   80 (431)
T 3ojo_A           11 GSKLTVVGL-GYIGLPTSIMFAKHGV--DVLGVDINQQT--IDKLQNGQISIEEPGLQEVYEEVLSSGKLKVS---TT--   80 (431)
T ss_dssp             -CEEEEECC-STTHHHHHHHHHHTTC--EEEEECSCHHH--HHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEE---SS--
T ss_pred             CCccEEEee-CHHHHHHHHHHHHCCC--EEEEEECCHHH--HHHHHCCCCCcCCCCHHHHHHhhcccCceEEe---Cc--
Confidence            469999999 9999999999999998  99999998722  12222210                02345542   34  


Q ss_pred             hhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEe-cCCCCChhHH
Q 017551           84 NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLI-SNPVNSTVPI  146 (369)
Q Consensus        84 ~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~-tNPv~~~t~i  146 (369)
                        +++||+||++.+.|......+    ..++..+...++.+.++. |..+|+.- |-|.+..-.+
T Consensus        81 --~~~aDvvii~VpTp~~~~~~~----~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v  139 (431)
T 3ojo_A           81 --PEASDVFIIAVPTPNNDDQYR----SCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDF  139 (431)
T ss_dssp             --CCCCSEEEECCCCCBCSSSSC----BBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHT
T ss_pred             --hhhCCEEEEEeCCCccccccC----CccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHH
Confidence              458999999987775432000    112344555556666655 55554443 5666655443

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=97.29  E-value=0.0015  Score=59.47  Aligned_cols=112  Identities=16%  Similarity=0.121  Sum_probs=68.9

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC-----
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT-----   87 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~-----   87 (369)
                      +.++|.|+||+|++|..++..|+..+.  +|+++|.+..  .....++.     .++..+. .-+|   +.++++     
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGA--SAVLLDLPNSGGEAQAKKLG-----NNCVFAPADVTSEKDVQTALALAKGK   83 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECTTSSHHHHHHHHC-----TTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCcHhHHHHHHHhC-----CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            456899999999999999999999987  9999999862  22222331     2223221 1122   333444     


Q ss_pred             --CCcEEEEcCCCCCCCC---------CC---HHHHHHHHHHHHHHHHHHHhhh----C-----CCeEEEEec
Q 017551           88 --GMDLVIIPAGVPRKPG---------MT---RDDLFNINAGIVRTLCEGIAKC----C-----PNATVNLIS  137 (369)
Q Consensus        88 --~ADiVii~ag~p~k~g---------~~---r~~~~~~N~~i~~~i~~~i~~~----~-----p~a~viv~t  137 (369)
                        ..|+||..||......         .+   ....+..|+.....+.+.+..+    .     ..+.++++|
T Consensus        84 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~is  156 (265)
T 2o23_A           84 FGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTA  156 (265)
T ss_dssp             HSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEEC
T ss_pred             CCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeC
Confidence              8999999998753211         22   2345566765555555554433    1     345666665

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=97.28  E-value=0.00016  Score=63.41  Aligned_cols=104  Identities=14%  Similarity=0.177  Sum_probs=66.9

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcC---CCcEEEEc
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT---GMDLVIIP   95 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~---~ADiVii~   95 (369)
                      .+|||.|+||+|++|+.++..|+ ++.  +|+++|.+.. ....|+.+            ..+++++++   ..|+||..
T Consensus         2 ~kM~vlVtGasg~iG~~~~~~l~-~g~--~V~~~~r~~~-~~~~D~~~------------~~~~~~~~~~~~~~d~vi~~   65 (202)
T 3d7l_A            2 NAMKILLIGASGTLGSAVKERLE-KKA--EVITAGRHSG-DVTVDITN------------IDSIKKMYEQVGKVDAIVSA   65 (202)
T ss_dssp             CSCEEEEETTTSHHHHHHHHHHT-TTS--EEEEEESSSS-SEECCTTC------------HHHHHHHHHHHCCEEEEEEC
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHH-CCC--eEEEEecCcc-ceeeecCC------------HHHHHHHHHHhCCCCEEEEC
Confidence            34699999999999999999999 876  9999998752 01112221            112233333   48999999


Q ss_pred             CCCCCCCC---CCH---HHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecC
Q 017551           96 AGVPRKPG---MTR---DDLFNINAGIVRTLCEGIAKCCP-NATVNLISN  138 (369)
Q Consensus        96 ag~p~k~g---~~r---~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tN  138 (369)
                      ||......   .+.   ...+..|+.....+.+.+.++.. .+.++++|.
T Consensus        66 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS  115 (202)
T 3d7l_A           66 TGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTG  115 (202)
T ss_dssp             CCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECC
T ss_pred             CCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcc
Confidence            98653221   222   34456787777777777766532 256666653

>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*

Probab=97.28  E-value=0.00084  Score=62.31  Aligned_cols=91  Identities=11%  Similarity=0.023  Sum_probs=59.0

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  100 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p~  100 (369)
                      +||+|||+ |.+|+.++..|.. +.  +|.++|.+.....  .+....    +...   + +.++++++|+||++...+ 
T Consensus         2 ~~i~iiG~-G~~G~~~a~~l~~-g~--~V~~~~~~~~~~~--~~~~~g----~~~~---~-~~~~~~~~D~vi~~v~~~-   66 (289)
T 2cvz_A            2 EKVAFIGL-GAMGYPMAGHLAR-RF--PTLVWNRTFEKAL--RHQEEF----GSEA---V-PLERVAEARVIFTCLPTT-   66 (289)
T ss_dssp             CCEEEECC-STTHHHHHHHHHT-TS--CEEEECSSTHHHH--HHHHHH----CCEE---C-CGGGGGGCSEEEECCSSH-
T ss_pred             CeEEEEcc-cHHHHHHHHHHhC-CC--eEEEEeCCHHHHH--HHHHCC----Cccc---C-HHHHHhCCCEEEEeCCCh-
Confidence            58999999 9999999999988 76  8999999762211  111111    1111   1 457789999999985221 


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCC
Q 017551          101 KPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPV  140 (369)
Q Consensus       101 k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv  140 (369)
                                    ..+.++.+.+.... |+.+++..+|..
T Consensus        67 --------------~~~~~v~~~l~~~l~~~~~vv~~s~~~   93 (289)
T 2cvz_A           67 --------------REVYEVAEALYPYLREGTYWVDATSGE   93 (289)
T ss_dssp             --------------HHHHHHHHHHTTTCCTTEEEEECSCCC
T ss_pred             --------------HHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence                          11233445555444 577777777754

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=97.28  E-value=0.0029  Score=58.37  Aligned_cols=119  Identities=19%  Similarity=0.235  Sum_probs=71.0

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-----
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-----   86 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-----   86 (369)
                      -+.++|.|+||+|++|..++..|+..+.  +|+++|.+..  .....++...  ..++..+. .-+|   +.+++     
T Consensus        29 l~~k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~  104 (272)
T 1yb1_A           29 VTGEIVLITGAGHGIGRLTAYEFAKLKS--KLVLWDINKHGLEETAAKCKGL--GAKVHTFVVDCSNREDIYSSAKKVKA  104 (272)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEEcCHHHHHHHHHHHHhc--CCeEEEEEeeCCCHHHHHHHHHHHHH
Confidence            3456899999999999999999999987  8999999762  2222333322  12333332 1123   22222     


Q ss_pred             --CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHH----HHHHHhhhCCCeEEEEecCCCC
Q 017551           87 --TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRT----LCEGIAKCCPNATVNLISNPVN  141 (369)
Q Consensus        87 --~~ADiVii~ag~p~k~g---~~---r~~~~~~N~~i~~~----i~~~i~~~~p~a~viv~tNPv~  141 (369)
                        .+.|+||..||......   .+   ....+..|+.....    +.+.+.+. ..+.|+++|....
T Consensus       105 ~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~~iv~isS~~~  170 (272)
T 1yb1_A          105 EIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN-NHGHIVTVASAAG  170 (272)
T ss_dssp             HTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCCC-
T ss_pred             HCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEEechhh
Confidence              37899999998754221   11   23455667655444    44444333 4566777765443

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=97.25  E-value=0.00097  Score=70.05  Aligned_cols=115  Identities=18%  Similarity=0.069  Sum_probs=73.5

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeC-C---CChhhhcC--CCc
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-Q---PQLENALT--GMD   90 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~-t---~dl~~al~--~AD   90 (369)
                      +.++|.|+||+|++|++++..|+..+.  +|+++|.+.  ......++.... ...+..+.+ -   .++.++++  ++|
T Consensus        10 ~~~~ilVTGatG~IG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~-~~~v~~v~~Dl~d~~~l~~~~~~~~~D   86 (699)
T 1z45_A           10 TSKIVLVTGGAGYIGSHTVVELIENGY--DCVVADNLSNSTYDSVARLEVLT-KHHIPFYEVDLCDRKGLEKVFKEYKID   86 (699)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSSCCTHHHHHHHHHH-TSCCCEEECCTTCHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcC--EEEEEECCCcchHHHHHHHhhcc-CCceEEEEcCCCCHHHHHHHHHhCCCC
Confidence            457999999999999999999999887  999999765  111112222111 112222111 1   23445666  899


Q ss_pred             EEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           91 LVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        91 iVii~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      +||.+||.....  .....+.+..|+.....+++.+.+....- +|++|
T Consensus        87 ~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~-iV~~S  134 (699)
T 1z45_A           87 SVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSK-FVFSS  134 (699)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCE-EEEEE
T ss_pred             EEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCE-EEEEC
Confidence            999999864311  11234567889999999999988775444 44443

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=97.24  E-value=0.00018  Score=67.18  Aligned_cols=109  Identities=14%  Similarity=0.066  Sum_probs=71.5

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhC--CCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCChhhhcC--CCcEEEEc
Q 017551           21 FKVAILGAAGGIGQPLAMLMKIN--PLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQLENALT--GMDLVIIP   95 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~--~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~dl~~al~--~ADiVii~   95 (369)
                      +||.|+||+|++|++++..|...  +.  +|+++|.+.....   +...  ...+.... ...++.++++  ++|+||.+
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~~~g~--~V~~~~r~~~~~~---~~~~--~~~~~~D~~d~~~~~~~~~~~~~d~vih~   75 (312)
T 2yy7_A            3 PKILIIGACGQIGTELTQKLRKLYGTE--NVIASDIRKLNTD---VVNS--GPFEVVNALDFNQIEHLVEVHKITDIYLM   75 (312)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHHHCGG--GEEEEESCCCSCH---HHHS--SCEEECCTTCHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEECCccHHHHHHHHHHHHhCCCC--EEEEEcCCCcccc---ccCC--CceEEecCCCHHHHHHHHhhcCCCEEEEC
Confidence            68999999999999999988877  55  8999998752211   1110  01111110 1123456677  89999999


Q ss_pred             CCCCCCC-CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           96 AGVPRKP-GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        96 ag~p~k~-g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ||..... .....+.+..|+.....+.+.+.+.... .++++|
T Consensus        76 a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S  117 (312)
T 2yy7_A           76 AALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIK-KIFWPS  117 (312)
T ss_dssp             CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCS-EEECCE
T ss_pred             CccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEec
Confidence            9864211 1234567788999999999998876433 344443

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=97.24  E-value=0.00016  Score=66.21  Aligned_cols=101  Identities=22%  Similarity=0.241  Sum_probs=68.9

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCChhhhcCC--CcEEEEcCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQLENALTG--MDLVIIPAG   97 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~dl~~al~~--ADiVii~ag   97 (369)
                      |||.|+||+|++|+.++..|+. +.  +|+++|.+....      .   .  +.... ...++.+++++  +|+||.+||
T Consensus         1 m~ilVtGatG~iG~~l~~~L~~-g~--~V~~~~r~~~~~------~---~--~~~Dl~~~~~~~~~~~~~~~d~vi~~a~   66 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLSE-RH--EVIKVYNSSEIQ------G---G--YKLDLTDFPRLEDFIIKKRPDVIINAAA   66 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHTT-TS--CEEEEESSSCCT------T---C--EECCTTSHHHHHHHHHHHCCSEEEECCC
T ss_pred             CEEEEECCCChhHHHHHHHHhc-CC--eEEEecCCCcCC------C---C--ceeccCCHHHHHHHHHhcCCCEEEECCc
Confidence            5899999999999999999984 54  899999875210      0   1  22111 11234456665  999999998


Q ss_pred             CCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           98 VPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        98 ~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      .....  .......+..|+.....+++.+.+..  ..++++|
T Consensus        67 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~iv~~S  106 (273)
T 2ggs_A           67 MTDVDKCEIEKEKAYKINAEAVRHIVRAGKVID--SYIVHIS  106 (273)
T ss_dssp             CCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT--CEEEEEE
T ss_pred             ccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhC--CeEEEEe
Confidence            65321  12455677889999999999988754  3555554

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=97.24  E-value=0.0012  Score=60.61  Aligned_cols=115  Identities=17%  Similarity=0.211  Sum_probs=70.3

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC-----
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT-----   87 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~-----   87 (369)
                      +.++|.|+||+|++|..++..|+..+.  +|++.|.+..  .....++..   ...+..+. .-+|   +.++++     
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   89 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGA--KVVIADIADDHGQKVCNNIGS---PDVISFVHCDVTKDEDVRNLVDTTIAK   89 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEcCChhHHHHHHHHhCC---CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            346899999999999999999999987  9999998752  222223321   11333322 1122   223333     


Q ss_pred             --CCcEEEEcCCCCCCC-----CCC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 017551           88 --GMDLVIIPAGVPRKP-----GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  138 (369)
Q Consensus        88 --~ADiVii~ag~p~k~-----g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN  138 (369)
                        +.|+||..||.....     ..+   ....+..|+.....+.+.+..+   ...+.++++|.
T Consensus        90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS  153 (278)
T 2bgk_A           90 HGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTAS  153 (278)
T ss_dssp             HSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECC
T ss_pred             cCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEee
Confidence              799999999864321     122   2345667766655555555443   23566777653

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=97.23  E-value=0.00035  Score=65.68  Aligned_cols=78  Identities=18%  Similarity=0.140  Sum_probs=51.1

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-c---hhHHHHhhcccCCCeEEEEe----CCCChhhhcCCCc
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-T---PGVTADISHMDTGAVVRGFL----GQPQLENALTGMD   90 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-~---~g~~~dL~~~~~~~~v~~~~----~t~dl~~al~~AD   90 (369)
                      .+++|.|+||+|++|++++..|+..+.  +|++++.+. .   ......+.... ...+....    ...++.++++++|
T Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~l~~~~-~~~v~~v~~D~~d~~~l~~a~~~~d   79 (321)
T 3c1o_A            3 HMEKIIIYGGTGYIGKFMVRASLSFSH--PTFIYARPLTPDSTPSSVQLREEFR-SMGVTIIEGEMEEHEKMVSVLKQVD   79 (321)
T ss_dssp             -CCCEEEETTTSTTHHHHHHHHHHTTC--CEEEEECCCCTTCCHHHHHHHHHHH-HTTCEEEECCTTCHHHHHHHHTTCS
T ss_pred             cccEEEEEcCCchhHHHHHHHHHhCCC--cEEEEECCcccccChHHHHHHHHhh-cCCcEEEEecCCCHHHHHHHHcCCC
Confidence            356899999999999999999998886  899999874 1   11111121110 01122211    1134668899999


Q ss_pred             EEEEcCCCC
Q 017551           91 LVIIPAGVP   99 (369)
Q Consensus        91 iVii~ag~p   99 (369)
                      +||.+++..
T Consensus        80 ~vi~~a~~~   88 (321)
T 3c1o_A           80 IVISALPFP   88 (321)
T ss_dssp             EEEECCCGG
T ss_pred             EEEECCCcc
Confidence            999998754

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=97.23  E-value=0.0015  Score=61.40  Aligned_cols=115  Identities=18%  Similarity=0.207  Sum_probs=71.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-------   86 (369)
                      .++|.|+||+|++|..++..|+..|.  +|++.|.+.  ......++...  ..++..+. .-+|   ..+++       
T Consensus        31 gk~vlVTGas~gIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  106 (301)
T 3tjr_A           31 GRAAVVTGGASGIGLATATEFARRGA--RLVLSDVDQPALEQAVNGLRGQ--GFDAHGVVCDVRHLDEMVRLADEAFRLL  106 (301)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHhC
Confidence            45899999999999999999999997  899999986  23333344332  22333322 1223   22233       


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 017551           87 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~---g~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      .+.|++|..||.....   ..+   ....+..|+.    +.+.+.+.+.+..+.+.|+++|.
T Consensus       107 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS  168 (301)
T 3tjr_A          107 GGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTAS  168 (301)
T ss_dssp             SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECC
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCc
Confidence            3789999999975321   122   2334555654    44444555555555677777764

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=97.23  E-value=0.00092  Score=61.08  Aligned_cols=114  Identities=18%  Similarity=0.251  Sum_probs=72.1

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC-------C
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENALT-------G   88 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~-------~   88 (369)
                      .++|.|+||+|++|..++..|+..+.  +|++.|.+.......++...  ..++..+. .-+|   +.++++       +
T Consensus         4 ~k~vlVTGas~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (255)
T 2q2v_A            4 GKTALVTGSTSGIGLGIAQVLARAGA--NIVLNGFGDPAPALAEIARH--GVKAVHHPADLSDVAQIEALFALAEREFGG   79 (255)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTC--EEEEECSSCCHHHHHHHHTT--SCCEEEECCCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCchHHHHHHHHhc--CCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            45899999999999999999999987  89999987642223334321  12333321 1122   333444       8


Q ss_pred             CcEEEEcCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 017551           89 MDLVIIPAGVPRKP---GMT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        89 ADiVii~ag~p~k~---g~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      .|++|..||.....   ..+   ....+..|+.    ..+.+.+.+.+.. .+.|+++|.
T Consensus        80 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS  138 (255)
T 2q2v_A           80 VDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARN-WGRIINIAS  138 (255)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECC
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcC
Confidence            99999999875321   122   2345666766    5666666666543 466777654

>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6

Probab=97.22  E-value=0.0012  Score=66.78  Aligned_cols=100  Identities=12%  Similarity=0.137  Sum_probs=62.6

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHhhcccCCCeEEEEeCCCChhhhcC---CCcEEEEc
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQPQLENALT---GMDLVIIP   95 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~~~~~~v~~~~~t~dl~~al~---~ADiVii~   95 (369)
                      |||+|||+ |.+|++++..|+..+.  +|.++|.+..+  ....+.........+..   +++++++++   ++|+||++
T Consensus         2 MkIgVIG~-G~mG~~lA~~La~~G~--~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~---~~~~~e~v~~l~~aDvVila   75 (478)
T 1pgj_A            2 MDVGVVGL-GVMGANLALNIAEKGF--KVAVFNRTYSKSEEFMKANASAPFAGNLKA---FETMEAFAASLKKPRKALIL   75 (478)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSHHHHHHHHHHTTTSTTGGGEEE---CSCHHHHHHHBCSSCEEEEC
T ss_pred             CEEEEECh-HHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHhcCCCCCCCCeEE---ECCHHHHHhcccCCCEEEEe
Confidence            68999999 9999999999999987  89999987522  11111110000112433   356666665   59999998


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCC
Q 017551           96 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVN  141 (369)
Q Consensus        96 ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~  141 (369)
                      ...    +           ..+.++++.+..+. |+.+|+..+|-..
T Consensus        76 Vp~----~-----------~~v~~vl~~l~~~l~~g~iIId~sng~~  107 (478)
T 1pgj_A           76 VQA----G-----------AATDSTIEQLKKVFEKGDILVDTGNAHF  107 (478)
T ss_dssp             CCC----S-----------HHHHHHHHHHHHHCCTTCEEEECCCCCH
T ss_pred             cCC----h-----------HHHHHHHHHHHhhCCCCCEEEECCCCCh
Confidence            521    1           11233444555544 6677777777653

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.21  E-value=0.00035  Score=69.37  Aligned_cols=139  Identities=21%  Similarity=0.265  Sum_probs=86.3

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCC---hhhh-cCCCcEEEE
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ---LENA-LTGMDLVII   94 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~d---l~~a-l~~ADiVii   94 (369)
                      +.++|.|+|+ |.+|+.++..|...+.  +++++|.+...  +..+..... .-+.+.  .++   |.++ +++||+||+
T Consensus         3 ~~~~viIiG~-Gr~G~~va~~L~~~g~--~vvvId~d~~~--v~~~~~~g~-~vi~GD--at~~~~L~~agi~~A~~viv   74 (413)
T 3l9w_A            3 HGMRVIIAGF-GRFGQITGRLLLSSGV--KMVVLDHDPDH--IETLRKFGM-KVFYGD--ATRMDLLESAGAAKAEVLIN   74 (413)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTC--CEEEEECCHHH--HHHHHHTTC-CCEESC--TTCHHHHHHTTTTTCSEEEE
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCC--CEEEEECCHHH--HHHHHhCCC-eEEEcC--CCCHHHHHhcCCCccCEEEE
Confidence            4568999999 9999999999999887  99999998622  112222111 122221  223   3333 689999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec-CCCCChhHHHHHHHHHhCCCCCCcEEEechhcHHHH
Q 017551           95 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS-NPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRA  173 (369)
Q Consensus        95 ~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t-NPv~~~t~i~ae~~~~~~~~~~~kviG~t~Ld~~R~  173 (369)
                      +.+-+           ..|    ..++..+++.+|+..|+.-+ ++.+.      +.+++.+   .+.|+--+..-+.++
T Consensus        75 ~~~~~-----------~~n----~~i~~~ar~~~p~~~Iiara~~~~~~------~~L~~~G---ad~Vi~~~~~~a~~l  130 (413)
T 3l9w_A           75 AIDDP-----------QTN----LQLTEMVKEHFPHLQIIARARDVDHY------IRLRQAG---VEKPERETFEGALKT  130 (413)
T ss_dssp             CCSSH-----------HHH----HHHHHHHHHHCTTCEEEEEESSHHHH------HHHHHTT---CSSCEETTHHHHHHH
T ss_pred             CCCCh-----------HHH----HHHHHHHHHhCCCCeEEEEECCHHHH------HHHHHCC---CCEEECccHHHHHHH
Confidence            85211           233    34566677788986555544 44322      3345543   356766555555666


Q ss_pred             HHHHHHHhCCCCCCCc
Q 017551          174 NTFVAEVLGLDPRDVD  189 (369)
Q Consensus       174 ~~~la~~lgv~~~~V~  189 (369)
                      -..+-..+|+++..++
T Consensus       131 a~~~L~~lg~~~~~~~  146 (413)
T 3l9w_A          131 GRLALESLGLGPYEAR  146 (413)
T ss_dssp             HHHHHHHTTCCHHHHH
T ss_pred             HHHHHHHcCCCHHHHH
Confidence            6666677888887764

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.20  E-value=0.0039  Score=52.56  Aligned_cols=73  Identities=14%  Similarity=0.142  Sum_probs=47.4

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCC---hhhh-cCCCcEEE
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ---LENA-LTGMDLVI   93 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~d---l~~a-l~~ADiVi   93 (369)
                      ...++|+|+|+ |.+|+.++..|...+.  +|+++|.+....  ..+... ....+. ....++   +.++ ++++|+||
T Consensus        17 ~~~~~v~IiG~-G~iG~~la~~L~~~g~--~V~vid~~~~~~--~~~~~~-~g~~~~-~~d~~~~~~l~~~~~~~ad~Vi   89 (155)
T 2g1u_A           17 QKSKYIVIFGC-GRLGSLIANLASSSGH--SVVVVDKNEYAF--HRLNSE-FSGFTV-VGDAAEFETLKECGMEKADMVF   89 (155)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESCGGGG--GGSCTT-CCSEEE-ESCTTSHHHHHTTTGGGCSEEE
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCC--eEEEEECCHHHH--HHHHhc-CCCcEE-EecCCCHHHHHHcCcccCCEEE
Confidence            34579999999 9999999999998887  999999986221  112201 111211 111122   3333 78899999


Q ss_pred             EcCC
Q 017551           94 IPAG   97 (369)
Q Consensus        94 i~ag   97 (369)
                      ++.+
T Consensus        90 ~~~~   93 (155)
T 2g1u_A           90 AFTN   93 (155)
T ss_dssp             ECSS
T ss_pred             EEeC
Confidence            9864

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=97.20  E-value=0.0034  Score=57.60  Aligned_cols=117  Identities=21%  Similarity=0.215  Sum_probs=70.2

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC-----
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT-----   87 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~-----   87 (369)
                      +.+++.|+||+|++|..++..|+..|.  +|++.|.+..  .....++.......++..+. .-+|   ..++++     
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   89 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGA--KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   89 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            346899999999999999999999987  9999999762  22223333211112333322 1223   222333     


Q ss_pred             --CCcEEEEcCCCCCC--C--CCC---HHHHHHHHH----HHHHHHHHHHhhhCCCeEEEEecC
Q 017551           88 --GMDLVIIPAGVPRK--P--GMT---RDDLFNINA----GIVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        88 --~ADiVii~ag~p~k--~--g~~---r~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                        ..|++|..||....  +  ..+   ....+..|+    .+.+.+.+.+.+.. .+.|+++|-
T Consensus        90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS  152 (267)
T 1iy8_A           90 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTAS  152 (267)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECC
T ss_pred             cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcc
Confidence              68999999997543  1  122   233455665    34455666665543 455666653

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=97.20  E-value=0.0011  Score=60.57  Aligned_cols=112  Identities=17%  Similarity=0.254  Sum_probs=69.5

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-------   86 (369)
                      .+++.|+||+|++|..++..|+..+.  +|++.|.+..  .....++.     .++..+. .-+|   .++.+       
T Consensus         6 gk~vlVTGas~gIG~a~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~   78 (247)
T 3rwb_A            6 GKTALVTGAAQGIGKAIAARLAADGA--TVIVSDINAEGAKAAAASIG-----KKARAIAADISDPGSVKALFAEIQALT   78 (247)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHC-----TTEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhC-----CceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            46899999999999999999999997  8999999862  22222231     2222221 1122   22222       


Q ss_pred             CCCcEEEEcCCCCCC-C--CCC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 017551           87 TGMDLVIIPAGVPRK-P--GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        87 ~~ADiVii~ag~p~k-~--g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      ...|++|..||.... +  ..+   ....+..|+.-    .+.+.+.+.+....+.|+++|-
T Consensus        79 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS  140 (247)
T 3rwb_A           79 GGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIAS  140 (247)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECc
Confidence            378999999987432 2  122   23345666544    4444555766655677777753

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=97.19  E-value=0.00027  Score=61.97  Aligned_cols=110  Identities=15%  Similarity=0.176  Sum_probs=68.7

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEeCCCChhhhcC---CCcEEEEc
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQLENALT---GMDLVIIP   95 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~~t~dl~~al~---~ADiVii~   95 (369)
                      ++|.|+||+|++|+.++..|+..    +|+++|.+..  .....++.......++.   ...++.++++   +.|+||..
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~----~V~~~~r~~~~~~~~~~~~~~~~~~~D~~---~~~~~~~~~~~~~~id~vi~~   73 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH----DLLLSGRRAGALAELAREVGARALPADLA---DELEAKALLEEAGPLDLLVHA   73 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS----EEEEECSCHHHHHHHHHHHTCEECCCCTT---SHHHHHHHHHHHCSEEEEEEC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC----CEEEEECCHHHHHHHHHhccCcEEEeeCC---CHHHHHHHHHhcCCCCEEEEC
Confidence            47999999999999999999877    8999998752  11222221100001111   1123344555   89999999


Q ss_pred             CCCCCCC------CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 017551           96 AGVPRKP------GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        96 ag~p~k~------g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      ||.....      .......+..|+.....+.+.+.+. +.+.++++|.
T Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~sS  121 (207)
T 2yut_A           74 VGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQ-KGARAVFFGA  121 (207)
T ss_dssp             CCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEE-EEEEEEEECC
T ss_pred             CCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhc-CCcEEEEEcC
Confidence            9875321      1223456778888888888887432 3456666654

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=97.19  E-value=0.0048  Score=57.29  Aligned_cols=116  Identities=16%  Similarity=0.217  Sum_probs=70.9

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC-----
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT-----   87 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~-----   87 (369)
                      +.+++.|+||+|+||..++..|+..+.  +|++.|.+.  ......++....  .++..+. .-+|   .+++++     
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~v~~~~~~~~~~  106 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGA--QVAVAARHSDALQVVADEIAGVG--GKALPIRCDVTQPDQVRGMLDQMTGE  106 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESSGGGGHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            346899999999999999999999997  899999986  233334443321  2222221 1223   223333     


Q ss_pred             --CCcEEEEcCCCCCCCC---CCH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 017551           88 --GMDLVIIPAGVPRKPG---MTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        88 --~ADiVii~ag~p~k~g---~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                        ..|++|..||......   .+.   ...+..|+.    +.+.+.+.+.+....+.|++++.
T Consensus       107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS  169 (276)
T 3r1i_A          107 LGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTAS  169 (276)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECc
Confidence              7899999999754221   222   334456654    44455555555544566777653

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=97.19  E-value=0.0003  Score=67.92  Aligned_cols=115  Identities=13%  Similarity=-0.055  Sum_probs=71.0

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchh---HHHHhhccc--CCC-eEEEEeC-CCC---hhhhcCC--
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG---VTADISHMD--TGA-VVRGFLG-QPQ---LENALTG--   88 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g---~~~dL~~~~--~~~-~v~~~~~-t~d---l~~al~~--   88 (369)
                      ++|.|+||+|++|+.++..|+..+.  +|+++|.+....   ...++....  ... .+..+.+ -+|   +.+++++  
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~  106 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGY--EVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIK  106 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCC--EEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcC
Confidence            4899999999999999999999887  999999865210   001111000  011 3443321 122   3455665  


Q ss_pred             CcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCC----CeEEEEec
Q 017551           89 MDLVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCP----NATVNLIS  137 (369)
Q Consensus        89 ADiVii~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p----~a~viv~t  137 (369)
                      .|+||.+||.....  .......+..|+.....+++.+.+...    .+.+|++|
T Consensus       107 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~S  161 (381)
T 1n7h_A          107 PDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAG  161 (381)
T ss_dssp             CSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_pred             CCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeC
Confidence            59999999865321  123445667788888888888876542    34666654

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=97.19  E-value=0.00032  Score=64.95  Aligned_cols=113  Identities=16%  Similarity=0.111  Sum_probs=69.4

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC-------C
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENALT-------G   88 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~-------~   88 (369)
                      .++|.|+||+|++|+.++..|+..|.  +|++.|.+.....  ++.... ...+..+. .-+|   ..++++       +
T Consensus         5 ~k~vlVTGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~--~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   79 (281)
T 3m1a_A            5 AKVWLVTGASSGFGRAIAEAAVAAGD--TVIGTARRTEALD--DLVAAY-PDRAEAISLDVTDGERIDVVAADVLARYGR   79 (281)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSGGGGH--HHHHHC-TTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHH--HHHHhc-cCCceEEEeeCCCHHHHHHHHHHHHHhCCC
Confidence            45899999999999999999999997  9999998762211  111111 12233221 1223   222333       7


Q ss_pred             CcEEEEcCCCCCC-C--CCCH---HHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 017551           89 MDLVIIPAGVPRK-P--GMTR---DDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        89 ADiVii~ag~p~k-~--g~~r---~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      .|+||..||.... +  ..+.   ...+..|+..    .+.+.+.+.+.. .+.|+++|-
T Consensus        80 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~~sS  138 (281)
T 3m1a_A           80 VDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERG-SGSVVNISS  138 (281)
T ss_dssp             CSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEEcC
Confidence            8999999986421 1  2222   3456677666    666666666654 455666653

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=97.19  E-value=0.0028  Score=57.14  Aligned_cols=114  Identities=14%  Similarity=0.148  Sum_probs=67.5

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC-------
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT-------   87 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~-------   87 (369)
                      ++|.|+||+|++|..++..|+..+.  +|+++|.+..  .....++... ...++..+. .-+|   +.++++       
T Consensus         3 k~vlItGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (250)
T 2cfc_A            3 RVAIVTGASSGNGLAIATRFLARGD--RVAALDLSAETLEETARTHWHA-YADKVLRVRADVADEGDVNAAIAATMEQFG   79 (250)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHSTT-TGGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            5799999999999999999999987  8999998762  2222233111 112333332 1123   223333       


Q ss_pred             CCcEEEEcCCCCCCCC------CC---HHHHHHHHHHHH----HHHHHHHhhhCCCeEEEEecC
Q 017551           88 GMDLVIIPAGVPRKPG------MT---RDDLFNINAGIV----RTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        88 ~ADiVii~ag~p~k~g------~~---r~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tN  138 (369)
                      +.|+||..||......      .+   ....+..|+.-.    +.+.+.+.+.. .+.++++|.
T Consensus        80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS  142 (250)
T 2cfc_A           80 AIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG-AGVIVNIAS  142 (250)
T ss_dssp             CCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             CCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECC
Confidence            7899999998643211      12   233455665444    44555554443 456666653

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=97.18  E-value=0.00056  Score=65.24  Aligned_cols=90  Identities=20%  Similarity=0.142  Sum_probs=61.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHH---HhhcccCCCeEEEEeC----CCChhhhcC--C
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTA---DISHMDTGAVVRGFLG----QPQLENALT--G   88 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~---dL~~~~~~~~v~~~~~----t~dl~~al~--~   88 (369)
                      ++||.|+||+|++|+.++..|+..+.  +|++++.+.  ......   ++..    ..+....+    ..++.++++  +
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~--~V~~l~R~~~~~~~~~~~~~~l~~----~~v~~~~~Dl~d~~~l~~~~~~~~   83 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHR--PTYILARPGPRSPSKAKIFKALED----KGAIIVYGLINEQEAMEKILKEHE   83 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTC--CEEEEECSSCCCHHHHHHHHHHHH----TTCEEEECCTTCHHHHHHHHHHTT
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCC--CEEEEECCCCCChhHHHHHHHHHh----CCcEEEEeecCCHHHHHHHHhhCC
Confidence            46999999999999999999998886  899999875  111111   2221    12222211    234567788  9


Q ss_pred             CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC
Q 017551           89 MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC  128 (369)
Q Consensus        89 ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~  128 (369)
                      +|+||.+++..             |+...+.+++.+.+..
T Consensus        84 ~d~Vi~~a~~~-------------n~~~~~~l~~aa~~~g  110 (346)
T 3i6i_A           84 IDIVVSTVGGE-------------SILDQIALVKAMKAVG  110 (346)
T ss_dssp             CCEEEECCCGG-------------GGGGHHHHHHHHHHHC
T ss_pred             CCEEEECCchh-------------hHHHHHHHHHHHHHcC
Confidence            99999998753             5555677888887776

>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*

Probab=97.18  E-value=0.0005  Score=63.13  Aligned_cols=93  Identities=15%  Similarity=0.152  Sum_probs=59.0

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  100 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p~  100 (369)
                      |||+|||+ |.+|+.++..|...+. .+|.++|.+....  ..+... .  .+...   +++.+++ ++|+||++.. | 
T Consensus         1 m~i~iiG~-G~mG~~~a~~l~~~g~-~~v~~~~r~~~~~--~~~~~~-~--g~~~~---~~~~~~~-~~D~vi~~v~-~-   67 (263)
T 1yqg_A            1 MNVYFLGG-GNMAAAVAGGLVKQGG-YRIYIANRGAEKR--ERLEKE-L--GVETS---ATLPELH-SDDVLILAVK-P-   67 (263)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCS-CEEEEECSSHHHH--HHHHHH-T--CCEEE---SSCCCCC-TTSEEEECSC-H-
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCC-CeEEEECCCHHHH--HHHHHh-c--CCEEe---CCHHHHh-cCCEEEEEeC-c-
Confidence            68999999 9999999999988772 3899999975221  122221 1  12222   3445678 9999999852 1 


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCC
Q 017551          101 KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS  142 (369)
Q Consensus       101 k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~  142 (369)
                                    ..+.++.+.+..  ++.+++..+|-...
T Consensus        68 --------------~~~~~v~~~l~~--~~~ivv~~~~g~~~   93 (263)
T 1yqg_A           68 --------------QDMEAACKNIRT--NGALVLSVAAGLSV   93 (263)
T ss_dssp             --------------HHHHHHHTTCCC--TTCEEEECCTTCCH
T ss_pred             --------------hhHHHHHHHhcc--CCCEEEEecCCCCH
Confidence                          123444444544  36666666666653

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=97.18  E-value=0.0031  Score=60.69  Aligned_cols=104  Identities=16%  Similarity=0.145  Sum_probs=66.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC-----CCChhhhcCCCcEEEE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-----QPQLENALTGMDLVII   94 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~-----t~dl~~al~~ADiVii   94 (369)
                      .++|.|+||+|++|+.++..|+..+.  +|++++.+.......++...   ..+....+     ..++.++++++|+||+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~l~~~---~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~   79 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGH--HVRAQVHSLKGLIAEELQAI---PNVTLFQGPLLNNVPLMDTLFEGAHLAFI   79 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTC--CEEEEESCSCSHHHHHHHTS---TTEEEEESCCTTCHHHHHHHHTTCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCC--EEEEEECCCChhhHHHHhhc---CCcEEEECCccCCHHHHHHHHhcCCEEEE
Confidence            56899999999999999999988886  89999987633222333321   12332221     1235678899999998


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCC
Q 017551           95 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNP  139 (369)
Q Consensus        95 ~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP  139 (369)
                      .++...   .      ..|... +.+++.+.+.. .. .++++|-.
T Consensus        80 ~a~~~~---~------~~~~~~-~~l~~aa~~~g~v~-~~V~~SS~  114 (352)
T 1xgk_A           80 NTTSQA---G------DEIAIG-KDLADAAKRAGTIQ-HYIYSSMP  114 (352)
T ss_dssp             CCCSTT---S------CHHHHH-HHHHHHHHHHSCCS-EEEEEECC
T ss_pred             cCCCCC---c------HHHHHH-HHHHHHHHHcCCcc-EEEEeCCc
Confidence            765321   1      224444 77777777765 33 45556543

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=97.18  E-value=0.0048  Score=55.62  Aligned_cols=114  Identities=14%  Similarity=0.122  Sum_probs=68.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-------   86 (369)
                      .++|.|+||+|++|..++..|+..+.  +|++.|.+..  .....++...   ..+..+. .-+|   +.+++       
T Consensus         6 ~k~vlVtGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (251)
T 1zk4_A            6 GKVAIITGGTLGIGLAIATKFVEEGA--KVMITGRHSDVGEKAAKSVGTP---DQIQFFQHDSSDEDGWTKLFDATEKAF   80 (251)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHCCT---TTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhhcc---CceEEEECCCCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999987  8999998752  2222223211   2333322 1122   22233       


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 017551           87 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~---g~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      ...|+||..||.....   ..+   ....+..|+.    ..+.+.+.+.+....+.++++|.
T Consensus        81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS  142 (251)
T 1zk4_A           81 GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSS  142 (251)
T ss_dssp             SSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECC
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence            2589999999875321   122   2345667766    44555555554432266777664

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=97.17  E-value=0.00055  Score=63.90  Aligned_cols=97  Identities=15%  Similarity=0.022  Sum_probs=61.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc---hhHHHHhhcccCCCeEEEEeC----CCChhhhcCCCcEE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFLG----QPQLENALTGMDLV   92 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~---~g~~~dL~~~~~~~~v~~~~~----t~dl~~al~~ADiV   92 (369)
                      .+||.|+||+|++|+.++..|+..+.  +|++++.+..   ......+.... ...+....+    ..++.++++++|+|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~l~~~~~~~d~v   80 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGH--PTYVLFRPEVVSNIDKVQMLLYFK-QLGAKLIEASLDDHQRLVDALKQVDVV   80 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC--CEEEECCSCCSSCHHHHHHHHHHH-TTTCEEECCCSSCHHHHHHHHTTCSEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCC--cEEEEECCCcccchhHHHHHHHHH-hCCeEEEeCCCCCHHHHHHHHhCCCEE
Confidence            46899999999999999999998886  8999998741   11221121110 112222211    23466889999999


Q ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC
Q 017551           93 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC  128 (369)
Q Consensus        93 ii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~  128 (369)
                      |.+++.... +        .|....+.+++.+.+..
T Consensus        81 i~~a~~~~~-~--------~~~~~~~~l~~aa~~~g  107 (313)
T 1qyd_A           81 ISALAGGVL-S--------HHILEQLKLVEAIKEAG  107 (313)
T ss_dssp             EECCCCSSS-S--------TTTTTHHHHHHHHHHSC
T ss_pred             EECCccccc-h--------hhHHHHHHHHHHHHhcC
Confidence            999875421 1        13444566667776654

>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*

Probab=97.17  E-value=0.0016  Score=63.81  Aligned_cols=96  Identities=15%  Similarity=0.137  Sum_probs=58.2

Q ss_pred             CEEEEEcCCCccHHHHHHHHHh-CCCCcEEEEEeCCCc-hhHHHH-hhccc------CCCe--EE--E--EeCCCChhhh
Q 017551           21 FKVAILGAAGGIGQPLAMLMKI-NPLVSVLHLYDVVNT-PGVTAD-ISHMD------TGAV--VR--G--FLGQPQLENA   85 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~-~~~~~el~L~D~~~~-~g~~~d-L~~~~------~~~~--v~--~--~~~t~dl~~a   85 (369)
                      |||+|||+ |.+|..++..|+. .+.  +|.++|.... ...... +....      ....  +.  .  ...++|++++
T Consensus         3 mkI~ViGa-G~~G~~~a~~La~~~G~--~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a   79 (404)
T 3c7a_A            3 VKVCVCGG-GNGAHTLSGLAASRDGV--EVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIA   79 (404)
T ss_dssp             EEEEEECC-SHHHHHHHHHHTTSTTE--EEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHH
T ss_pred             ceEEEECC-CHHHHHHHHHHHhCCCC--EEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHH
Confidence            69999999 9999999999987 476  9999993221 111112 12110      0001  11  0  0014577788


Q ss_pred             cCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEE
Q 017551           86 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNL  135 (369)
Q Consensus        86 l~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv  135 (369)
                      +++||+||++...+                ...++++++..+. |+.+|+.
T Consensus        80 ~~~aD~Vilav~~~----------------~~~~v~~~l~~~l~~~~ivv~  114 (404)
T 3c7a_A           80 ISGADVVILTVPAF----------------AHEGYFQAMAPYVQDSALIVG  114 (404)
T ss_dssp             HTTCSEEEECSCGG----------------GHHHHHHHHTTTCCTTCEEEE
T ss_pred             hCCCCEEEEeCchH----------------HHHHHHHHHHhhCCCCcEEEE
Confidence            99999999985221                1345667777665 4554443

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=97.17  E-value=0.0018  Score=58.84  Aligned_cols=116  Identities=16%  Similarity=0.183  Sum_probs=72.0

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCCh---hhhc------
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENAL------   86 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl---~~al------   86 (369)
                      +.+++.|+||+|++|..++..|+..+.  +|+++|.+.  ......++...  ..++..+. .-+|.   ++.+      
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGA--AVVVADINAEAAEAVAKQIVAD--GGTAISVAVDVSDPESAKAMADRTLAE   83 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            346899999999999999999999997  899999986  22333334322  23333332 12232   2222      


Q ss_pred             -CCCcEEEEcCCCCC----CC--CCC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecCC
Q 017551           87 -TGMDLVIIPAGVPR----KP--GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISNP  139 (369)
Q Consensus        87 -~~ADiVii~ag~p~----k~--g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNP  139 (369)
                       .+.|++|..||+..    .+  ..+   ....+..|+.-    .+.+.+.+.+.. .+.|+++|.-
T Consensus        84 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~  149 (253)
T 3qiv_A           84 FGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRG-GGAIVNQSST  149 (253)
T ss_dssp             HSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECC-
T ss_pred             cCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEECCc
Confidence             38899999998731    11  122   23456677665    556666665543 5667777643

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.17  E-value=0.00073  Score=55.43  Aligned_cols=98  Identities=10%  Similarity=0.064  Sum_probs=58.5

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCC---hhhh-cCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ---LENA-LTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~d---l~~a-l~~ADiVii~a   96 (369)
                      ++|.|+|+ |.+|+.++..|...+.  +++++|.+...  ...+...  ...+. ....++   +.++ ++++|+||++.
T Consensus         7 ~~v~I~G~-G~iG~~~a~~l~~~g~--~v~~~d~~~~~--~~~~~~~--~~~~~-~~d~~~~~~l~~~~~~~~d~vi~~~   78 (144)
T 2hmt_A            7 KQFAVIGL-GRFGGSIVKELHRMGH--EVLAVDINEEK--VNAYASY--ATHAV-IANATEENELLSLGIRNFEYVIVAI   78 (144)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTC--CCEEEESCHHH--HHTTTTT--CSEEE-ECCTTCHHHHHTTTGGGCSEEEECC
T ss_pred             CcEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCHHH--HHHHHHh--CCEEE-EeCCCCHHHHHhcCCCCCCEEEECC
Confidence            47999999 9999999999998886  89999987521  1112211  11211 111222   2232 67899999987


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 017551           97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  140 (369)
Q Consensus        97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv  140 (369)
                      +.+          ...|..    ++..+++.+|+-++...+||.
T Consensus        79 ~~~----------~~~~~~----~~~~~~~~~~~~ii~~~~~~~  108 (144)
T 2hmt_A           79 GAN----------IQASTL----TTLLLKELDIPNIWVKAQNYY  108 (144)
T ss_dssp             CSC----------HHHHHH----HHHHHHHTTCSEEEEECCSHH
T ss_pred             CCc----------hHHHHH----HHHHHHHcCCCeEEEEeCCHH
Confidence            543          123332    334445566764444555654

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.17  E-value=0.0058  Score=56.07  Aligned_cols=116  Identities=22%  Similarity=0.300  Sum_probs=70.4

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCCh---hhhc------
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENAL------   86 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl---~~al------   86 (369)
                      +.+++.|+||+|++|..++..|+..+.  +|++.|.+.  ......++.... ..++..+. .-+|.   ++++      
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~   85 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGA--NVAVAGRSTADIDACVADLDQLG-SGKVIGVQTDVSDRAQCDALAGRAVEE   85 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTS-SSCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhC-CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            346899999999999999999999998  999999986  233344454322 13444332 12332   2222      


Q ss_pred             -CCCcEEEEcCCCCCC-C--CCCH---HHHHHHHHHHHH----HHHHHHhhhCCCeEEEEecC
Q 017551           87 -TGMDLVIIPAGVPRK-P--GMTR---DDLFNINAGIVR----TLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        87 -~~ADiVii~ag~p~k-~--g~~r---~~~~~~N~~i~~----~i~~~i~~~~p~a~viv~tN  138 (369)
                       ...|++|..||.... +  ..+.   ...+..|+.-..    .+.+.+.+.. .+.|+++|-
T Consensus        86 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS  147 (262)
T 3pk0_A           86 FGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASG-SGRVVLTSS  147 (262)
T ss_dssp             HSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHS-SCEEEEECC
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEec
Confidence             389999999986432 2  2232   334566655444    4444444433 455666653

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=97.16  E-value=0.0022  Score=57.71  Aligned_cols=98  Identities=16%  Similarity=0.166  Sum_probs=62.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCC-CCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC----CCChhhhcCCCcEEEE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG----QPQLENALTGMDLVII   94 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~-~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~----t~dl~~al~~ADiVii   94 (369)
                      .++|.|+||+|++|+.++..|+..+ .  +|++++.+....     ... ....+..+.+    ..++.++++++|+||.
T Consensus        23 mk~vlVtGatG~iG~~l~~~L~~~G~~--~V~~~~R~~~~~-----~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~   94 (236)
T 3qvo_A           23 MKNVLILGAGGQIARHVINQLADKQTI--KQTLFARQPAKI-----HKP-YPTNSQIIMGDVLNHAALKQAMQGQDIVYA   94 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTE--EEEEEESSGGGS-----CSS-CCTTEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             ccEEEEEeCCcHHHHHHHHHHHhCCCc--eEEEEEcChhhh-----ccc-ccCCcEEEEecCCCHHHHHHHhcCCCEEEE
Confidence            4589999999999999999999988 6  999999875211     110 0122332221    2345678899999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 017551           95 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        95 ~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      .+|.+.      .+      ...+.+++.+.+.... .+|++|-
T Consensus        95 ~a~~~~------~~------~~~~~~~~~~~~~~~~-~iV~iSS  125 (236)
T 3qvo_A           95 NLTGED------LD------IQANSVIAAMKACDVK-RLIFVLS  125 (236)
T ss_dssp             ECCSTT------HH------HHHHHHHHHHHHTTCC-EEEEECC
T ss_pred             cCCCCc------hh------HHHHHHHHHHHHcCCC-EEEEEec
Confidence            886421      11      1234666777665533 4555553

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=97.15  E-value=0.0022  Score=58.50  Aligned_cols=102  Identities=15%  Similarity=0.127  Sum_probs=61.9

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCC---CCcEEEEEeCCCch-hHHHHhhcccCCCeEEEEeC----CCChhhhcC---
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINP---LVSVLHLYDVVNTP-GVTADISHMDTGAVVRGFLG----QPQLENALT---   87 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~---~~~el~L~D~~~~~-g~~~dL~~~~~~~~v~~~~~----t~dl~~al~---   87 (369)
                      +.++|.|+||+|++|+.++..|+..+   .  +|+++|.+... ....++...  ..++..+..    ..++.++++   
T Consensus        20 ~~k~vlITGasggIG~~la~~L~~~G~~~~--~V~~~~r~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~   95 (267)
T 1sny_A           20 HMNSILITGCNRGLGLGLVKALLNLPQPPQ--HLFTTCRNREQAKELEDLAKN--HSNIHILEIDLRNFDAYDKLVADIE   95 (267)
T ss_dssp             CCSEEEESCCSSHHHHHHHHHHHTSSSCCS--EEEEEESCTTSCHHHHHHHHH--CTTEEEEECCTTCGGGHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhcCCCCc--EEEEEecChhhhHHHHHhhcc--CCceEEEEecCCChHHHHHHHHHHH
Confidence            34689999999999999999999988   5  99999998621 122333221  123333211    123334444   


Q ss_pred             ------CCcEEEEcCCCCCCCC----CC---HHHHHHHHHHHHHHHHHHH
Q 017551           88 ------GMDLVIIPAGVPRKPG----MT---RDDLFNINAGIVRTLCEGI  124 (369)
Q Consensus        88 ------~ADiVii~ag~p~k~g----~~---r~~~~~~N~~i~~~i~~~i  124 (369)
                            ..|+||..||.....+    .+   ....+..|+.....+.+.+
T Consensus        96 ~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~  145 (267)
T 1sny_A           96 GVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKAC  145 (267)
T ss_dssp             HHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             HhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHH
Confidence                  7999999999754211    22   2334556655444444444

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=97.15  E-value=0.0015  Score=68.34  Aligned_cols=111  Identities=14%  Similarity=0.070  Sum_probs=74.6

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhC-CCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC-CCC----hhhhcCCCcEE
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QPQ----LENALTGMDLV   92 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~-~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~-t~d----l~~al~~ADiV   92 (369)
                      +.++|.|+||+|++|+.++..|... +.  +|+++|.+....  ..+..   ...+..+.+ -+|    +.++++++|+|
T Consensus       314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~--~V~~~~r~~~~~--~~~~~---~~~v~~v~~Dl~d~~~~~~~~~~~~D~V  386 (660)
T 1z7e_A          314 RRTRVLILGVNGFIGNHLTERLLREDHY--EVYGLDIGSDAI--SRFLN---HPHFHFVEGDISIHSEWIEYHVKKCDVV  386 (660)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHSSSE--EEEEEESCCTTT--GGGTT---CTTEEEEECCTTTCHHHHHHHHHHCSEE
T ss_pred             cCceEEEEcCCcHHHHHHHHHHHhcCCC--EEEEEEcCchhh--hhhcc---CCceEEEECCCCCcHHHHHHhhcCCCEE
Confidence            4579999999999999999999887 66  899999875211  11111   123333321 122    34467899999


Q ss_pred             EEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 017551           93 IIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        93 ii~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      |.+||....+  .....+.+..|+.....+++.+.+..  ..++++|.
T Consensus       387 ih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~--~r~V~~SS  432 (660)
T 1z7e_A          387 LPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPST  432 (660)
T ss_dssp             EECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECC
T ss_pred             EECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC--CEEEEEec
Confidence            9999865321  12345567788888899999988775  45666653

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=97.15  E-value=0.00082  Score=61.49  Aligned_cols=112  Identities=13%  Similarity=0.067  Sum_probs=64.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT------   87 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~------   87 (369)
                      .+++.|+||+|++|..++..|+..+.  +|++.|.+..  .....++.     ..+..+. .-+|   .+++++      
T Consensus         7 ~k~~lVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (257)
T 3tpc_A            7 SRVFIVTGASSGLGAAVTRMLAQEGA--TVLGLDLKPPAGEEPAAELG-----AAVRFRNADVTNEADATAALAFAKQEF   79 (257)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESSCC-----------------CEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHhC-----CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999997  8999998862  22222221     1222221 1122   223333      


Q ss_pred             -CCcEEEEcCCCCCCCC-------CC---HHHHHHHHHHHHHHHHHHHhhh---------CCCeEEEEecC
Q 017551           88 -GMDLVIIPAGVPRKPG-------MT---RDDLFNINAGIVRTLCEGIAKC---------CPNATVNLISN  138 (369)
Q Consensus        88 -~ADiVii~ag~p~k~g-------~~---r~~~~~~N~~i~~~i~~~i~~~---------~p~a~viv~tN  138 (369)
                       ..|++|..||......       .+   ....+..|+.-...+.+.+..+         ...+.|+++|-
T Consensus        80 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS  150 (257)
T 3tpc_A           80 GHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTAS  150 (257)
T ss_dssp             SCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECC
T ss_pred             CCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEec
Confidence             8999999998753211       22   2344566755544444444332         13466777653

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=97.15  E-value=0.00097  Score=62.02  Aligned_cols=76  Identities=22%  Similarity=0.241  Sum_probs=50.6

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-------chhH-HHHhhcccCCCeE-EEE-eCCCChhhhcCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-------TPGV-TADISHMDTGAVV-RGF-LGQPQLENALTGM   89 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-------~~g~-~~dL~~~~~~~~v-~~~-~~t~dl~~al~~A   89 (369)
                      ++||.|+||+|++|+.++..|+..+.  +|++++.+.       .+.. ..++.+.  ...+ ... ....++.++++++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~~~~~l~~~--~v~~v~~D~~d~~~l~~~~~~~   77 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGN--PTYALVRKTITAANPETKEELIDNYQSL--GVILLEGDINDHETLVKAIKQV   77 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTC--CEEEEECCSCCSSCHHHHHHHHHHHHHT--TCEEEECCTTCHHHHHHHHTTC
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCC--cEEEEECCCcccCChHHHHHHHHHHHhC--CCEEEEeCCCCHHHHHHHHhCC
Confidence            46899999999999999999988886  888898875       1111 1122221  1111 111 1113466889999


Q ss_pred             cEEEEcCCCC
Q 017551           90 DLVIIPAGVP   99 (369)
Q Consensus        90 DiVii~ag~p   99 (369)
                      |+||.+++..
T Consensus        78 d~vi~~a~~~   87 (307)
T 2gas_A           78 DIVICAAGRL   87 (307)
T ss_dssp             SEEEECSSSS
T ss_pred             CEEEECCccc
Confidence            9999998754

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=97.15  E-value=0.0021  Score=58.40  Aligned_cols=104  Identities=16%  Similarity=0.209  Sum_probs=66.7

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchh---HHHHhhcccCCCeEEEEeCCCChhhhc----CCCcEEE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG---VTADISHMDTGAVVRGFLGQPQLENAL----TGMDLVI   93 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g---~~~dL~~~~~~~~v~~~~~t~dl~~al----~~ADiVi   93 (369)
                      ++|.|+||+|++|..++..|+..+.  +|++.|.+....   ...|+.+..            +.++++    ...|++|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~Dl~~~~------------~v~~~~~~~~~~id~lv   67 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGH--QIVGIDIRDAEVIADLSTAEGRKQ------------AIADVLAKCSKGMDGLV   67 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSSSSEECCTTSHHHHHH------------HHHHHHTTCTTCCSEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCchhhccccccCCCCHH------------HHHHHHHHhCCCCCEEE
Confidence            3799999999999999999999987  899999876211   223443321            122333    4569999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCC
Q 017551           94 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNP  139 (369)
Q Consensus        94 i~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP  139 (369)
                      ..||..... ......+..|+.....+.+.+..+   ...+.|+++|--
T Consensus        68 ~~Ag~~~~~-~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~  115 (257)
T 1fjh_A           68 LCAGLGPQT-KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSV  115 (257)
T ss_dssp             ECCCCCTTC-SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCG
T ss_pred             ECCCCCCCc-ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECCh
Confidence            999976422 225556677766555555554432   123566666543

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=97.15  E-value=0.0033  Score=57.37  Aligned_cols=114  Identities=21%  Similarity=0.342  Sum_probs=69.3

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC-------
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT-------   87 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~-------   87 (369)
                      +++.|+||+|++|..++..|+..+.  +|++.|.+..  .....++...  ..++..+. .-+|   +.++++       
T Consensus         3 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   78 (256)
T 1geg_A            3 KVALVTGAGQGIGKAIALRLVKDGF--AVAIADYNDATAKAVASEINQA--GGHAVAVKVDVSDRDQVFAAVEQARKTLG   78 (256)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHHTT
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            4799999999999999999999987  8999998762  2223333321  12333221 1223   223333       


Q ss_pred             CCcEEEEcCCCCCC-C--CCCH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 017551           88 GMDLVIIPAGVPRK-P--GMTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        88 ~ADiVii~ag~p~k-~--g~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      +.|++|..||.... +  ..+.   ...+..|+.    +.+.+.+.+.+..+.+.|+++|.
T Consensus        79 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS  139 (256)
T 1geg_A           79 GFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACS  139 (256)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECc
Confidence            89999999987432 1  1222   334556654    44555555555443566777653

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=97.14  E-value=0.0012  Score=60.04  Aligned_cols=117  Identities=15%  Similarity=0.157  Sum_probs=67.1

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHhhccc-----CCCeEEEEe-CCCC---hhhhcCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMD-----TGAVVRGFL-GQPQ---LENALTG   88 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~~-----~~~~v~~~~-~t~d---l~~al~~   88 (369)
                      .++|.|+||+|++|..++..|+..+.  +|+++|.+...  ....++....     ...++..+. .-+|   +.+++++
T Consensus         7 ~k~vlITGasggiG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   84 (264)
T 2pd6_A            7 SALALVTGAGSGIGRAVSVRLAGEGA--TVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQ   84 (264)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHH
Confidence            45899999999999999999999987  89999987622  1222221110     002233222 1223   2333443


Q ss_pred             C--------cEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhh----hCCCeEEEEecC
Q 017551           89 M--------DLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAK----CCPNATVNLISN  138 (369)
Q Consensus        89 A--------DiVii~ag~p~k~---g~~---r~~~~~~N~~i~~~i~~~i~~----~~p~a~viv~tN  138 (369)
                      +        |+||..||.....   ..+   ....+..|+.....+.+.+..    ....+.|+++|-
T Consensus        85 ~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS  152 (264)
T 2pd6_A           85 VQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISS  152 (264)
T ss_dssp             HHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred             HHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECC
Confidence            3        9999999875421   122   234556666555555554443    332466777654

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=97.14  E-value=0.0037  Score=57.50  Aligned_cols=116  Identities=15%  Similarity=0.195  Sum_probs=71.0

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCCh------hhhcCCCc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL------ENALTGMD   90 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl------~~al~~AD   90 (369)
                      .+++.|+||+|++|..++..|+..|.  +|++.|.+.  ......++........+..+. .-+|.      .+.+...|
T Consensus        10 ~k~~lVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id   87 (267)
T 3t4x_A           10 GKTALVTGSTAGIGKAIATSLVAEGA--NVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVD   87 (267)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCC
Confidence            45899999999999999999999997  999999986  223333343321123333332 12232      12334899


Q ss_pred             EEEEcCCCCCCCC---CCH---HHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 017551           91 LVIIPAGVPRKPG---MTR---DDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        91 iVii~ag~p~k~g---~~r---~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      ++|..||......   .+.   ...+..|+.-    .+.+.+.+.+. ..+.|+++|-
T Consensus        88 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv~isS  144 (267)
T 3t4x_A           88 ILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIER-KEGRVIFIAS  144 (267)
T ss_dssp             EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TEEEEEEECC
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCEEEEEcc
Confidence            9999999754221   222   3346667655    44455555433 4566777653

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=97.14  E-value=0.003  Score=58.35  Aligned_cols=116  Identities=20%  Similarity=0.276  Sum_probs=70.4

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--------------chhHHHHhhcccCCCeEEEEe-CCCC--
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--------------TPGVTADISHMDTGAVVRGFL-GQPQ--   81 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--------------~~g~~~dL~~~~~~~~v~~~~-~t~d--   81 (369)
                      +.+++.|+||+|+||..++..|+..+.  +|+++|.+.              ......++...  ..++..+. .-+|  
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~   87 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGA--DIIAVDLCDQIASVPYPLATPEELAATVKLVEDI--GSRIVARQADVRDRE   87 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH--TCCEEEEECCTTCHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC--eEEEEecccccccccccccchHHHHHHHHHHHhc--CCeEEEEeCCCCCHH
Confidence            346899999999999999999999998  899999872              11112222221  23344332 1223  


Q ss_pred             -hhhhcC-------CCcEEEEcCCCCCCCC--CCHHHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 017551           82 -LENALT-------GMDLVIIPAGVPRKPG--MTRDDLFNINAG----IVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        82 -l~~al~-------~ADiVii~ag~p~k~g--~~r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                       .+++++       ..|++|..||......  ......+..|+.    +.+.+.+.+.+....+.|+++|-
T Consensus        88 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS  158 (278)
T 3sx2_A           88 SLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISS  158 (278)
T ss_dssp             HHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECC
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEcc
Confidence             222333       7899999999753221  112344566654    44445555555555677777764

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=97.14  E-value=0.0016  Score=58.55  Aligned_cols=115  Identities=19%  Similarity=0.198  Sum_probs=67.4

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCC---hhhhcC---CCcEE
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ---LENALT---GMDLV   92 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~d---l~~al~---~ADiV   92 (369)
                      +.++|.|+||+|++|+.++..|+..+.  +|+++|.+.....  ++........+.. ..-+|   +.++++   ..|+|
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~--~~~~~~~~~~~~~-~D~~~~~~~~~~~~~~~~id~v   80 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGA--KVVAVTRTNSDLV--SLAKECPGIEPVC-VDLGDWDATEKALGGIGPVDLL   80 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHH--HHHHHSTTCEEEE-CCTTCHHHHHHHHTTCCCCSEE
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHH--HHHHhccCCCcEE-ecCCCHHHHHHHHHHcCCCCEE
Confidence            456999999999999999999999987  8999998752111  1111001111111 11122   334444   47999


Q ss_pred             EEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHh----hhCCCeEEEEecC
Q 017551           93 IIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIA----KCCPNATVNLISN  138 (369)
Q Consensus        93 ii~ag~p~k~---g~~---r~~~~~~N~~i~~~i~~~i~----~~~p~a~viv~tN  138 (369)
                      |..||.....   ..+   ....+..|+.....+.+.+.    +....+.++++|-
T Consensus        81 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS  136 (244)
T 1cyd_A           81 VNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSS  136 (244)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred             EECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcc
Confidence            9999865321   122   23455667666544444443    3333566777654

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=97.13  E-value=0.00063  Score=61.74  Aligned_cols=116  Identities=17%  Similarity=0.190  Sum_probs=68.0

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc---C
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL---T   87 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al---~   87 (369)
                      ..+.++|.|+||+|++|..++..|+..+.  +|++.|.+..  .....++..     .+.... .-++   ..+.+   .
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~   83 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGS--KVIISGSNEEKLKSLGNALKD-----NYTIEVCNLANKEECSNLISKTS   83 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHCS-----SEEEEECCTTSHHHHHHHHHTCS
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHhcc-----CccEEEcCCCCHHHHHHHHHhcC
Confidence            44567999999999999999999999997  8999999762  222222321     222221 1122   22222   3


Q ss_pred             CCcEEEEcCCCCCCC------CCCHHHHHHHHHHHHHHHH----HHHhhhCCCeEEEEecCCC
Q 017551           88 GMDLVIIPAGVPRKP------GMTRDDLFNINAGIVRTLC----EGIAKCCPNATVNLISNPV  140 (369)
Q Consensus        88 ~ADiVii~ag~p~k~------g~~r~~~~~~N~~i~~~i~----~~i~~~~p~a~viv~tNPv  140 (369)
                      +.|++|..||.....      .......+..|+.-...+.    +.+.+. ..+.|+++|-..
T Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~iv~isS~~  145 (249)
T 3f9i_A           84 NLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQK-RYGRIINISSIV  145 (249)
T ss_dssp             CCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCCC
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEEccHH
Confidence            789999999864321      1233455666655444444    444433 456677776543

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.13  E-value=0.00071  Score=60.75  Aligned_cols=94  Identities=18%  Similarity=0.198  Sum_probs=61.3

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      ..+||+|||+ |.+|+.++..|...+.  +|.++|.+...  ...+...    .+...    ++.++++++|+||++...
T Consensus        27 ~~~~I~iiG~-G~~G~~la~~l~~~g~--~V~~~~r~~~~--~~~~~~~----g~~~~----~~~~~~~~~DvVi~av~~   93 (215)
T 2vns_A           27 EAPKVGILGS-GDFARSLATRLVGSGF--KVVVGSRNPKR--TARLFPS----AAQVT----FQEEAVSSPEVIFVAVFR   93 (215)
T ss_dssp             --CCEEEECC-SHHHHHHHHHHHHTTC--CEEEEESSHHH--HHHHSBT----TSEEE----EHHHHTTSCSEEEECSCG
T ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHCCC--EEEEEeCCHHH--HHHHHHc----CCcee----cHHHHHhCCCEEEECCCh
Confidence            4579999998 9999999999998887  89999987522  1223221    12221    456889999999998531


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCC
Q 017551           99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS  142 (369)
Q Consensus        99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~  142 (369)
                          ...+            ++.+ +....++.+++.++|+...
T Consensus        94 ----~~~~------------~v~~-l~~~~~~~~vv~~s~g~~~  120 (215)
T 2vns_A           94 ----EHYS------------SLCS-LSDQLAGKILVDVSNPTEQ  120 (215)
T ss_dssp             ----GGSG------------GGGG-GHHHHTTCEEEECCCCCHH
T ss_pred             ----HHHH------------HHHH-HHHhcCCCEEEEeCCCccc
Confidence                1111            1111 2223368888889998754

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=97.13  E-value=0.0032  Score=57.57  Aligned_cols=116  Identities=18%  Similarity=0.269  Sum_probs=69.3

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT------   87 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~------   87 (369)
                      .++|.|+||+|++|..++..|+..+.  +|++.|.+..  .....++.......++..+. .-+|   +.++++      
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (260)
T 2z1n_A            7 GKLAVVTAGSSGLGFASALELARNGA--RLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLG   84 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            45899999999999999999999987  8999999762  22223333210011333322 1122   233343      


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHH----HHHHHHHhhhCCCeEEEEecC
Q 017551           88 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIV----RTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        88 ~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tN  138 (369)
                      +.|+||..||.....   ..+   ....+..|+.-.    +.+.+.+.+.. .+.|+++|-
T Consensus        85 gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS  144 (260)
T 2z1n_A           85 GADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG-WGRMVYIGS  144 (260)
T ss_dssp             CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECc
Confidence            599999999875321   122   234456665554    55555555443 456666653

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=97.12  E-value=0.0054  Score=56.44  Aligned_cols=116  Identities=16%  Similarity=0.198  Sum_probs=71.5

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-C---CCChhhhc-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-G---QPQLENAL-------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~---t~dl~~al-------   86 (369)
                      .+++.|+||+|++|..++..|+..+.  +|++.|.+.  ......++.... ..++..+. .   ..+.++++       
T Consensus        20 ~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   96 (266)
T 4egf_A           20 GKRALITGATKGIGADIARAFAAAGA--RLVLSGRDVSELDAARRALGEQF-GTDVHTVAIDLAEPDAPAELARRAAEAF   96 (266)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTSTTHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999998  899999986  223333343211 12333321 1   12222222       


Q ss_pred             CCCcEEEEcCCCCCCCC---CCH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 017551           87 TGMDLVIIPAGVPRKPG---MTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~g---~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      ...|++|..||......   .+.   ...+..|+.    +.+.+.+.+.+....+.|+++|-
T Consensus        97 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS  158 (266)
T 4egf_A           97 GGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVAS  158 (266)
T ss_dssp             TSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcc
Confidence            37899999999754221   222   334556654    44555555655555677777753

>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*

Probab=97.12  E-value=0.0025  Score=64.36  Aligned_cols=98  Identities=17%  Similarity=0.165  Sum_probs=62.7

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhc-ccCCCeEEEEeCCCChhhhc---CCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISH-MDTGAVVRGFLGQPQLENAL---TGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~-~~~~~~v~~~~~t~dl~~al---~~ADiVii~a   96 (369)
                      |||+|||+ |.+|++++..|+..+.  +|.++|++..+.  .++.. ......+..   ++++++++   +++|+||++.
T Consensus         3 m~IgvIG~-G~mG~~lA~~La~~G~--~V~v~dr~~~~~--~~l~~~~~~g~gi~~---~~~~~e~v~~l~~aDvVilaV   74 (482)
T 2pgd_A            3 ADIALIGL-AVMGQNLILNMNDHGF--VVCAFNRTVSKV--DDFLANEAKGTKVLG---AHSLEEMVSKLKKPRRIILLV   74 (482)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSTHHH--HHHHHTTTTTSSCEE---CSSHHHHHHHBCSSCEEEECS
T ss_pred             CeEEEECh-HHHHHHHHHHHHHCCC--eEEEEeCCHHHH--HHHHhccccCCCeEE---eCCHHHHHhhccCCCEEEEeC
Confidence            68999999 9999999999999987  899999976221  12221 100112332   35666665   5999999985


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCC
Q 017551           97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVN  141 (369)
Q Consensus        97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~  141 (369)
                      ..+               ..+.++++.+..+. |+.+||..+|-..
T Consensus        75 p~~---------------~~v~~vl~~l~~~l~~g~iII~~s~~~~  105 (482)
T 2pgd_A           75 KAG---------------QAVDNFIEKLVPLLDIGDIIIDGGNSEY  105 (482)
T ss_dssp             CTT---------------HHHHHHHHHHHHHCCTTCEEEECSCCCH
T ss_pred             CCh---------------HHHHHHHHHHHhhcCCCCEEEECCCCCH
Confidence            211               11333444555444 5677777777654

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=97.12  E-value=0.00045  Score=63.53  Aligned_cols=100  Identities=14%  Similarity=0.118  Sum_probs=60.7

Q ss_pred             EEEEEcCCCccHHHHHHHHHhC--CCCcEEEEEeCCCchhHHHHhhcccCCCeEEEE-eCCCChhhhcCCCcEEEEcCCC
Q 017551           22 KVAILGAAGGIGQPLAMLMKIN--PLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~--~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~-~~t~dl~~al~~ADiVii~ag~   98 (369)
                      ||.|+||+|++|+.++..|...  +.  +|+++|.+.....  ++.+... ..+... ....++.++++++|+||.+++.
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~--~V~~~~r~~~~~~--~~~~~~~-~~~~~D~~d~~~~~~~~~~~d~vi~~a~~   75 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPAS--QIVAIVRNPAKAQ--ALAAQGI-TVRQADYGDEAALTSALQGVEKLLLISSS   75 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGG--GEEEEESCTTTCH--HHHHTTC-EEEECCTTCHHHHHHHTTTCSEEEECC--
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCc--eEEEEEcChHhhh--hhhcCCC-eEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence            5899999999999999999887  65  8999998752211  1211110 111111 1113456788999999999875


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      +.          ..|+...+.+++.+.+....- ++++|
T Consensus        76 ~~----------~~~~~~~~~l~~a~~~~~~~~-~v~~S  103 (286)
T 2zcu_A           76 EV----------GQRAPQHRNVINAAKAAGVKF-IAYTS  103 (286)
T ss_dssp             ----------------CHHHHHHHHHHHHTCCE-EEEEE
T ss_pred             Cc----------hHHHHHHHHHHHHHHHcCCCE-EEEEC
Confidence            31          136667778888887765444 44443

>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*

Probab=97.12  E-value=0.0024  Score=64.42  Aligned_cols=98  Identities=8%  Similarity=0.071  Sum_probs=63.6

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCC---CcEEEEcC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTG---MDLVIIPA   96 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~---ADiVii~a   96 (369)
                      .+||+|||+ |.+|++++..|+..+.  +|.++|.+..+.  .++........+..   ++++++++++   +|+||++.
T Consensus         5 ~~~IgvIG~-G~mG~~lA~~L~~~G~--~V~v~dr~~~~~--~~l~~~~~~~gi~~---~~s~~e~v~~l~~aDvVilav   76 (474)
T 2iz1_A            5 QANFGVVGM-AVMGKNLALNVESRGY--TVAIYNRTTSKT--EEVFKEHQDKNLVF---TKTLEEFVGSLEKPRRIMLMV   76 (474)
T ss_dssp             TBSEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSHHHH--HHHHHHTTTSCEEE---CSSHHHHHHTBCSSCEEEECC
T ss_pred             CCcEEEEee-HHHHHHHHHHHHhCCC--EEEEEcCCHHHH--HHHHHhCcCCCeEE---eCCHHHHHhhccCCCEEEEEc
Confidence            368999999 9999999999999887  899999875221  11221100123433   4567777665   99999985


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCC
Q 017551           97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPV  140 (369)
Q Consensus        97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv  140 (369)
                      ..+               ..+.++.+.+.... |+.+||..+|-.
T Consensus        77 p~~---------------~~v~~vl~~l~~~l~~g~iiId~s~~~  106 (474)
T 2iz1_A           77 QAG---------------AATDATIKSLLPLLDIGDILIDGGNTH  106 (474)
T ss_dssp             CTT---------------HHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred             cCc---------------hHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence            211               12334445666555 567777777764

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=97.12  E-value=0.0049  Score=55.41  Aligned_cols=116  Identities=18%  Similarity=0.234  Sum_probs=64.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEe-CCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC-----
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYD-VVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT-----   87 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D-~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~-----   87 (369)
                      .++|.|+||+|++|..++..|+..+.  +|+++| .+..  .....++...  ..++..+. .-+|   ++++++     
T Consensus         5 ~~~vlItGasggiG~~~a~~l~~~G~--~V~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (247)
T 2hq1_A            5 GKTAIVTGSSRGLGKAIAWKLGNMGA--NIVLNGSPASTSLDATAEEFKAA--GINVVVAKGDVKNPEDVENMVKTAMDA   80 (247)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEECTTCSHHHHHHHHHHHT--TCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCcCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            46899999999999999999999987  899884 4432  2222333321  22333332 1223   222333     


Q ss_pred             --CCcEEEEcCCCCCCC------CCCHHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCC
Q 017551           88 --GMDLVIIPAGVPRKP------GMTRDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNP  139 (369)
Q Consensus        88 --~ADiVii~ag~p~k~------g~~r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP  139 (369)
                        +.|+||..||.....      .......+..|+.....+.+.+..+   ...+.++++|..
T Consensus        81 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~  143 (247)
T 2hq1_A           81 FGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSI  143 (247)
T ss_dssp             HSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC-
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCh
Confidence              799999999875321      1123455667766654444444332   134667777654

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=97.12  E-value=0.00095  Score=64.60  Aligned_cols=89  Identities=21%  Similarity=0.284  Sum_probs=57.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch-hHHHHhhcccCCCeEEEEeCCCChhhhcC----CCcEEEE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGFLGQPQLENALT----GMDLVII   94 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~-g~~~dL~~~~~~~~v~~~~~t~dl~~al~----~ADiVii   94 (369)
                      .+||+|||+ |.||..++..|+..+.  +|++||.+... ..+.++     ..  ..   ++++.++++    +||+||+
T Consensus         8 ~~kIgIIG~-G~mG~slA~~L~~~G~--~V~~~dr~~~~~~~a~~~-----G~--~~---~~~~~e~~~~a~~~aDlVil   74 (341)
T 3ktd_A            8 SRPVCILGL-GLIGGSLLRDLHAANH--SVFGYNRSRSGAKSAVDE-----GF--DV---SADLEATLQRAAAEDALIVL   74 (341)
T ss_dssp             SSCEEEECC-SHHHHHHHHHHHHTTC--CEEEECSCHHHHHHHHHT-----TC--CE---ESCHHHHHHHHHHTTCEEEE
T ss_pred             CCEEEEEee-cHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHc-----CC--ee---eCCHHHHHHhcccCCCEEEE
Confidence            469999999 9999999999999886  99999998621 122221     11  11   235555554    5799999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           95 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        95 ~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      +.  |              ...+.++.+.+..+.|+++|+.++
T Consensus        75 av--P--------------~~~~~~vl~~l~~~~~~~iv~Dv~  101 (341)
T 3ktd_A           75 AV--P--------------MTAIDSLLDAVHTHAPNNGFTDVV  101 (341)
T ss_dssp             CS--C--------------HHHHHHHHHHHHHHCTTCCEEECC
T ss_pred             eC--C--------------HHHHHHHHHHHHccCCCCEEEEcC
Confidence            84  2              122334445555556777655543

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.12  E-value=0.0019  Score=58.02  Aligned_cols=102  Identities=18%  Similarity=0.183  Sum_probs=60.5

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC--------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENALT--------   87 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~--------   87 (369)
                      .++|.|+||+|++|..++..|+..+...+|+++|.+.....  ++.+. ...++..+. .-+|   +.++++        
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~--~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKAT--ELKSI-KDSRVHVLPLTVTCDKSLDTFVSKVGEIVGS   79 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCH--HHHTC-CCTTEEEEECCTTCHHHHHHHHHHHHHHHGG
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHH--HHHhc-cCCceEEEEeecCCHHHHHHHHHHHHHhcCC
Confidence            45899999999999999999999882129999999762211  12221 123344332 1122   233343        


Q ss_pred             -CCcEEEEcCCCCC--CC--CCC---HHHHHHHHHHHHHHHHHHH
Q 017551           88 -GMDLVIIPAGVPR--KP--GMT---RDDLFNINAGIVRTLCEGI  124 (369)
Q Consensus        88 -~ADiVii~ag~p~--k~--g~~---r~~~~~~N~~i~~~i~~~i  124 (369)
                       +.|+||..||...  .+  ..+   ....+..|+.....+.+.+
T Consensus        80 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~  124 (250)
T 1yo6_A           80 DGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKL  124 (250)
T ss_dssp             GCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHT
T ss_pred             CCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence             8999999998754  11  122   2334556654444444433

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=97.11  E-value=0.0054  Score=54.92  Aligned_cols=101  Identities=18%  Similarity=0.197  Sum_probs=61.1

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC-------
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT-------   87 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~-------   87 (369)
                      +++.|+||+|++|..++..|+..+.  +|++.|.+.  ......++.... ..++..+. .-+|   ..++++       
T Consensus         3 k~vlITGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (235)
T 3l77_A            3 KVAVITGASRGIGEAIARALARDGY--ALALGARSVDRLEKIAHELMQEQ-GVEVFYHHLDVSKAESVEEFSKKVLERFG   79 (235)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhc-CCeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            4789999999999999999999997  899999986  233333443111 12333321 1122   223333       


Q ss_pred             CCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHH
Q 017551           88 GMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGI  124 (369)
Q Consensus        88 ~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i~~~i~~~i  124 (369)
                      ..|++|..||.....   ..+.   ...+..|+.-...+.+.+
T Consensus        80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~  122 (235)
T 3l77_A           80 DVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAF  122 (235)
T ss_dssp             SCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             CCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            789999999975322   1232   334556655444444443

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=97.10  E-value=0.0018  Score=60.36  Aligned_cols=117  Identities=17%  Similarity=0.154  Sum_probs=69.6

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC-----
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT-----   87 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~-----   87 (369)
                      +.++|.|+||+|++|..++..|+..+.  +|++.|.+..  .....++.... ..++..+. .-+|   +.++++     
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~  101 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGA--QCVIASRKMDVLKATAEQISSQT-GNKVHAIQCDVRDPDMVQNTVSELIKV  101 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhc-CCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence            346899999999999999999999987  8999999762  22223333211 12333332 1122   223333     


Q ss_pred             --CCcEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHhh----hCCCeEEEEecC
Q 017551           88 --GMDLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEGIAK----CCPNATVNLISN  138 (369)
Q Consensus        88 --~ADiVii~ag~p~k-~--g~~---r~~~~~~N~~i~~~i~~~i~~----~~p~a~viv~tN  138 (369)
                        ..|+||..||.... +  ..+   ....+..|+.....+.+.+..    ....+.++++|.
T Consensus       102 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS  164 (302)
T 1w6u_A          102 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITT  164 (302)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcc
Confidence              45999999986432 1  122   234556676555555444433    334566776653

>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}

Probab=97.10  E-value=0.0027  Score=64.48  Aligned_cols=98  Identities=14%  Similarity=0.151  Sum_probs=65.4

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhc-ccCCCeEEEEeCCCChhhhcCC---CcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISH-MDTGAVVRGFLGQPQLENALTG---MDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~-~~~~~~v~~~~~t~dl~~al~~---ADiVii~a   96 (369)
                      .||+|||+ |.+|++++..|+..+.  +|.+||++..+.  .++.. ......+..   ++++++++++   +|+||++.
T Consensus        11 ~~IgvIGl-G~MG~~lA~~La~~G~--~V~v~dr~~~~~--~~l~~~~~~~~gi~~---~~s~~e~v~~l~~aDvVil~V   82 (497)
T 2p4q_A           11 ADFGLIGL-AVMGQNLILNAADHGF--TVCAYNRTQSKV--DHFLANEAKGKSIIG---ATSIEDFISKLKRPRKVMLLV   82 (497)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSSHHH--HHHHHTTTTTSSEEC---CSSHHHHHHTSCSSCEEEECC
T ss_pred             CCEEEEee-HHHHHHHHHHHHHCCC--EEEEEeCCHHHH--HHHHcccccCCCeEE---eCCHHHHHhcCCCCCEEEEEc
Confidence            59999999 9999999999999998  899999986322  22222 100012332   4567777766   99999985


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCC
Q 017551           97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVN  141 (369)
Q Consensus        97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~  141 (369)
                      ..    +           ..++++++.+..+. |+.+||..+|-..
T Consensus        83 p~----~-----------~~v~~vl~~l~~~l~~g~iIId~s~~~~  113 (497)
T 2p4q_A           83 KA----G-----------APVDALINQIVPLLEKGDIIIDGGNSHF  113 (497)
T ss_dssp             CS----S-----------HHHHHHHHHHGGGCCTTCEEEECSCCCH
T ss_pred             CC----h-----------HHHHHHHHHHHHhCCCCCEEEECCCCCh
Confidence            21    1           12445556666665 5677777887543

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=97.10  E-value=0.0026  Score=58.03  Aligned_cols=110  Identities=13%  Similarity=0.148  Sum_probs=67.6

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-------   86 (369)
                      .++|.|+||+|++|..++..|+..+.  +|++.|.+..  .....++     ..++..+. .-+|   +++++       
T Consensus         6 ~k~vlVTGas~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (253)
T 1hxh_A            6 GKVALVTGGASGVGLEVVKLLLGEGA--KVAFSDINEAAGQQLAAEL-----GERSMFVRHDVSSEADWTLVMAAVQRRL   78 (253)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHHH-----CTTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHc-----CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999987  8999998762  2222222     12233221 1122   22223       


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 017551           87 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~---g~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      ...|++|..||.....   ..+   ....+..|+.    ..+.+.+.+.+..  +.|+++|.
T Consensus        79 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--g~iv~isS  138 (253)
T 1hxh_A           79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG--GSIINMAS  138 (253)
T ss_dssp             CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC--EEEEEECC
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC--CEEEEEcc
Confidence            3469999999975321   122   2344566644    5555666665443  66777764

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=97.09  E-value=0.00085  Score=61.45  Aligned_cols=117  Identities=21%  Similarity=0.248  Sum_probs=72.8

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeC-CC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC---
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV-VN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT---   87 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~-~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~---   87 (369)
                      .+.++|.|+||+|++|+.++..|+..+.  +|++.|. +.  ......++...  ..++..+. .-+|   +.++++   
T Consensus        19 ~~~k~vlItGasggiG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   94 (274)
T 1ja9_A           19 LAGKVALTTGAGRGIGRGIAIELGRRGA--SVVVNYGSSSKAAEEVVAELKKL--GAQGVAIQADISKPSEVVALFDKAV   94 (274)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCchHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHH
Confidence            3456899999999999999999999987  8999998 43  22222333321  22333322 1223   333343   


Q ss_pred             ----CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecC
Q 017551           88 ----GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCCP-NATVNLISN  138 (369)
Q Consensus        88 ----~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tN  138 (369)
                          +.|+||..||.....   ..+   ....+..|+.....+.+.+..+.. .+.++++|-
T Consensus        95 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS  156 (274)
T 1ja9_A           95 SHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSS  156 (274)
T ss_dssp             HHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             HHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcC
Confidence                889999999875321   122   244567787777777776665531 256666653

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=97.09  E-value=0.00055  Score=64.02  Aligned_cols=105  Identities=15%  Similarity=0.174  Sum_probs=68.6

Q ss_pred             EEEEEcCCCccHHHHHHHHHhC--CCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCChhhhcC--CCcEEEEcC
Q 017551           22 KVAILGAAGGIGQPLAMLMKIN--PLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQLENALT--GMDLVIIPA   96 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~--~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~dl~~al~--~ADiVii~a   96 (369)
                      ||.|+||+|++|++++..|...  +.  +|+++|.+.....     .   ...+.... ...++.++++  ++|+||.+|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~--~V~~~~r~~~~~~-----~---~~~~~~D~~d~~~~~~~~~~~~~d~vih~a   70 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKK--NVIASDIVQRDTG-----G---IKFITLDVSNRDEIDRAVEKYSIDAIFHLA   70 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGG--GEEEEESSCCCCT-----T---CCEEECCTTCHHHHHHHHHHTTCCEEEECC
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCC--EEEEecCCCcccc-----C---ceEEEecCCCHHHHHHHHhhcCCcEEEECC
Confidence            6899999999999999988876  55  8899987652110     0   01111110 0123445666  899999998


Q ss_pred             CCCCCCC-CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           97 GVPRKPG-MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        97 g~p~k~g-~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      +...... ......+..|+.....+++.+.+....- ++++|
T Consensus        71 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~-~v~~S  111 (317)
T 3ajr_A           71 GILSAKGEKDPALAYKVNMNGTYNILEAAKQHRVEK-VVIPS  111 (317)
T ss_dssp             CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCE-EEEEE
T ss_pred             cccCCccccChHHHhhhhhHHHHHHHHHHHHcCCCE-EEEec
Confidence            7642111 2345667889999999999988765444 44443

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=97.09  E-value=0.0025  Score=59.18  Aligned_cols=115  Identities=17%  Similarity=0.190  Sum_probs=70.0

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhhc------
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------   86 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al------   86 (369)
                      +.+++.|+||+|++|..++..|+..|.  +|++.|.+.  ......++...  ..++..+. .-+|   ..+.+      
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGA--HVILHGVKPGSTAAVQQRIIAS--GGTAQELAGDLSEAGAGTDLIERAEAI  107 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSTTTTHHHHHHHHHT--TCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHh
Confidence            446899999999999999999999998  899999987  33333444332  12333322 1122   22222      


Q ss_pred             CCCcEEEEcCCCCCCCC---CCH---HHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 017551           87 TGMDLVIIPAGVPRKPG---MTR---DDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~g---~~r---~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      ...|++|..||......   .+.   ...+..|+.-    .+.+.+.+.+. ..+.|+++|-
T Consensus       108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~Iv~isS  168 (275)
T 4imr_A          108 APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVAR-KWGRVVSIGS  168 (275)
T ss_dssp             SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECC
Confidence            37899999998754221   232   3345566544    44444444444 3566777653

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=97.09  E-value=0.0013  Score=60.42  Aligned_cols=111  Identities=17%  Similarity=0.271  Sum_probs=68.6

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT------   87 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~------   87 (369)
                      .++|.|+||+|++|..++..|+..|.  +|++.|.+..  .....++..     .+..+. .-+|   +.++++      
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~~~   79 (260)
T 1nff_A            7 GKVALVSGGARGMGASHVRAMVAEGA--KVVFGDILDEEGKAMAAELAD-----AARYVHLDVTQPAQWKAAVDTAVTAF   79 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHTGG-----GEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhhc-----CceEEEecCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999987  9999998762  222222321     122221 1122   333444      


Q ss_pred             -CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHH----HHHHHHHhhhCCCeEEEEecC
Q 017551           88 -GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIV----RTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        88 -~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tN  138 (369)
                       +.|++|..||.....   ..+   ....+..|+.-.    +.+.+.+.+.. .+.|+++|.
T Consensus        80 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS  140 (260)
T 1nff_A           80 GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISS  140 (260)
T ss_dssp             SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEee
Confidence             899999999875321   122   234556665544    55555565543 466776653

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=97.09  E-value=0.004  Score=56.99  Aligned_cols=115  Identities=11%  Similarity=0.103  Sum_probs=70.4

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-------   86 (369)
                      .+++.|+||+|++|..++..|+..+.  +|+++|.+.  ......++...  ..++..+. .-+|   .++++       
T Consensus         6 ~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (257)
T 3imf_A            6 EKVVIITGGSSGMGKGMATRFAKEGA--RVVITGRTKEKLEEAKLEIEQF--PGQILTVQMDVRNTDDIQKMIEQIDEKF   81 (257)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHCCS--TTCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999997  899999986  22333344332  23444332 1223   22222       


Q ss_pred             CCCcEEEEcCCCCCC-C--CCCH---HHHHHHHHHHHH----HHHHHHhhhCCCeEEEEecC
Q 017551           87 TGMDLVIIPAGVPRK-P--GMTR---DDLFNINAGIVR----TLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        87 ~~ADiVii~ag~p~k-~--g~~r---~~~~~~N~~i~~----~i~~~i~~~~p~a~viv~tN  138 (369)
                      ...|++|..||.... +  ..+.   ...+..|+.-..    .+.+.+.+....+.|+++|-
T Consensus        82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS  143 (257)
T 3imf_A           82 GRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVA  143 (257)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECC
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECc
Confidence            378999999986432 2  1222   334556655444    44444444455666777753

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=97.09  E-value=0.0013  Score=60.33  Aligned_cols=111  Identities=22%  Similarity=0.269  Sum_probs=65.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHhhcccCCCeEEEEe-CCCC---hhhhcC------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFL-GQPQ---LENALT------   87 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~------   87 (369)
                      .++|.|+||+|++|..++..|+..+.  +|++.|.+...  ....++..     .+..+. .-+|   +.++++      
T Consensus        12 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~D~~d~~~v~~~~~~~~~~~   84 (263)
T 3ak4_A           12 GRKAIVTGGSKGIGAAIARALDKAGA--TVAIADLDVMAAQAVVAGLEN-----GGFAVEVDVTKRASVDAAMQKAIDAL   84 (263)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHTCTT-----CCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHhc-----CCeEEEEeCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999987  99999997622  11222211     122111 1122   333344      


Q ss_pred             -CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHH----HHHHHhhhCCCeEEEEec
Q 017551           88 -GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRT----LCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        88 -~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~~----i~~~i~~~~p~a~viv~t  137 (369)
                       +.|+||..||.....   ..+   ....+..|+.....    ..+.+.+....+.|+++|
T Consensus        85 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~is  145 (263)
T 3ak4_A           85 GGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTA  145 (263)
T ss_dssp             TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEEC
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence             899999999875321   122   23345566544444    444444333245666665

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.09  E-value=0.0033  Score=58.12  Aligned_cols=115  Identities=16%  Similarity=0.164  Sum_probs=74.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--------------chhHHHHhhcccCCCeEEEEe-CCCCh--
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--------------TPGVTADISHMDTGAVVRGFL-GQPQL--   82 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--------------~~g~~~dL~~~~~~~~v~~~~-~t~dl--   82 (369)
                      .+++.|+||+|+||..++..|+..+.  +|+++|.+.              ......++...  ..++..+. .-+|.  
T Consensus        10 gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~   85 (287)
T 3pxx_A           10 DKVVLVTGGARGQGRSHAVKLAEEGA--DIILFDICHDIETNEYPLATSRDLEEAGLEVEKT--GRKAYTAEVDVRDRAA   85 (287)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT--TSCEEEEECCTTCHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC--eEEEEcccccccccccchhhhHHHHHHHHHHHhc--CCceEEEEccCCCHHH
Confidence            46899999999999999999999997  999999872              11112222221  23344332 12232  


Q ss_pred             -hhhc-------CCCcEEEEcCCCCCCC-CCC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 017551           83 -ENAL-------TGMDLVIIPAGVPRKP-GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  138 (369)
Q Consensus        83 -~~al-------~~ADiVii~ag~p~k~-g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN  138 (369)
                       .+++       ...|++|..||..... ..+   ....+..|+.-...+.+.+..+- ..+.|+++|-
T Consensus        86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS  154 (287)
T 3pxx_A           86 VSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGS  154 (287)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEecc
Confidence             2223       3789999999975322 122   34567788888888888777664 4566777664

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=97.08  E-value=0.00069  Score=63.65  Aligned_cols=75  Identities=20%  Similarity=0.288  Sum_probs=50.8

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hh-HHHHhhcccCCCeE-EEE-eCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PG-VTADISHMDTGAVV-RGF-LGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g-~~~dL~~~~~~~~v-~~~-~~t~dl~~al~~ADiVii~a   96 (369)
                      +||.|+||+|++|+.++..|...+.  +|++++.+.. .. ...++...  ...+ ... ....++.++++++|+||.++
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~--~V~~l~R~~~~~~~~~~~l~~~--~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a   87 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGH--PTYVFTRPNSSKTTLLDEFQSL--GAIIVKGELDEHEKLVELMKKVDVVISAL   87 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTC--CEEEEECTTCSCHHHHHHHHHT--TCEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCC--cEEEEECCCCchhhHHHHhhcC--CCEEEEecCCCHHHHHHHHcCCCEEEECC
Confidence            3899999999999999999999886  8899998752 21 11223221  1111 111 11134668899999999998


Q ss_pred             CCC
Q 017551           97 GVP   99 (369)
Q Consensus        97 g~p   99 (369)
                      +..
T Consensus        88 ~~~   90 (318)
T 2r6j_A           88 AFP   90 (318)
T ss_dssp             CGG
T ss_pred             chh
Confidence            754

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=97.08  E-value=0.0013  Score=59.64  Aligned_cols=115  Identities=17%  Similarity=0.257  Sum_probs=69.2

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCCh---hhhc------
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQL---ENAL------   86 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~dl---~~al------   86 (369)
                      +.+++.|+||+|++|..++..|+..+.  +|++.|.+..  .....++...  ..++..+. .-+|.   ++.+      
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGA--TVVGTATSQASAEKFENSMKEK--GFKARGLVLNISDIESIQNFFAEIKAE   79 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            346899999999999999999999987  8999999862  2233333332  22333332 12232   2222      


Q ss_pred             -CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHH----HHhhhCCCeEEEEecC
Q 017551           87 -TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCE----GIAKCCPNATVNLISN  138 (369)
Q Consensus        87 -~~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~~i~~----~i~~~~p~a~viv~tN  138 (369)
                       ...|+||..||.....   ..+   ....+..|+.-...+.+    .+.+. ..+.++++|-
T Consensus        80 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS  141 (247)
T 3lyl_A           80 NLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKK-RWGRIISIGS  141 (247)
T ss_dssp             TCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCeEEEEEcc
Confidence             2579999999975422   122   23445666554444444    44433 3466777664

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=97.06  E-value=0.0023  Score=58.76  Aligned_cols=113  Identities=17%  Similarity=0.236  Sum_probs=67.6

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCChh---hh-------c
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQLE---NA-------L   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl~---~a-------l   86 (369)
                      .+++.|+||+|++|..++..|+..+.  +|+++|.+.  ......++...  ..++..+. .-+|.+   ++       +
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (262)
T 1zem_A            7 GKVCLVTGAGGNIGLATALRLAEEGT--AIALLDMNREALEKAEASVREK--GVEARSYVCDVTSEEAVIGTVDSVVRDF   82 (262)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTT--TSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence            45899999999999999999999997  899999876  22233334322  12333322 122321   12       2


Q ss_pred             CCCcEEEEcCCCC-C-CC--CCCH---HHHHHHHHHHHHHH----HHHHhhhCCCeEEEEec
Q 017551           87 TGMDLVIIPAGVP-R-KP--GMTR---DDLFNINAGIVRTL----CEGIAKCCPNATVNLIS  137 (369)
Q Consensus        87 ~~ADiVii~ag~p-~-k~--g~~r---~~~~~~N~~i~~~i----~~~i~~~~p~a~viv~t  137 (369)
                      .+.|++|..||.. . .+  ..+.   ...+..|+.-...+    .+.+.+. ..+.|+++|
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~is  143 (262)
T 1zem_A           83 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQ-NYGRIVNTA  143 (262)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEC
T ss_pred             CCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEc
Confidence            3789999999875 2 12  1222   33455665544444    4444433 346677765

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=97.06  E-value=0.0023  Score=58.52  Aligned_cols=113  Identities=17%  Similarity=0.203  Sum_probs=68.0

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-------   86 (369)
                      .++|.|+||+|++|..++..|+..|.  +|++.|.+..  .....++...  ..++..+. .-+|   .++++       
T Consensus        14 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   89 (260)
T 2zat_A           14 NKVALVTASTDGIGLAIARRLAQDGA--HVVVSSRKQENVDRTVATLQGE--GLSVTGTVCHVGKAEDRERLVAMAVNLH   89 (260)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999987  9999998762  2223334322  12333322 1122   22233       


Q ss_pred             CCCcEEEEcCCCCCC--C--CCC---HHHHHHHHHHHHHHHH----HHHhhhCCCeEEEEec
Q 017551           87 TGMDLVIIPAGVPRK--P--GMT---RDDLFNINAGIVRTLC----EGIAKCCPNATVNLIS  137 (369)
Q Consensus        87 ~~ADiVii~ag~p~k--~--g~~---r~~~~~~N~~i~~~i~----~~i~~~~p~a~viv~t  137 (369)
                      .+.|++|..||....  +  ..+   ....+..|+.-...+.    +.+.+. ..+.|+++|
T Consensus        90 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~g~iv~is  150 (260)
T 2zat_A           90 GGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKR-GGGSVLIVS  150 (260)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEe
Confidence            389999999987431  1  122   2345566655554444    444433 345666665

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=97.05  E-value=0.0029  Score=58.65  Aligned_cols=115  Identities=17%  Similarity=0.180  Sum_probs=70.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-------   86 (369)
                      .++|.|+||+|++|..++..|+..+.  +|++.|.+..  .....++...  ..++..+. .-+|   .++++       
T Consensus        22 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   97 (277)
T 2rhc_B           22 SEVALVTGATSGIGLEIARRLGKEGL--RVFVCARGEEGLRTTLKELREA--GVEADGRTCDVRSVPEIEALVAAVVERY   97 (277)
T ss_dssp             SCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHHh
Confidence            35899999999999999999999987  8999999762  2223334321  12333221 1122   22223       


Q ss_pred             CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhh-----CCCeEEEEecC
Q 017551           87 TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKC-----CPNATVNLISN  138 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~g---~~---r~~~~~~N~~i~~~i~~~i~~~-----~p~a~viv~tN  138 (369)
                      .+.|+||..||......   .+   ....+..|+.-...+.+.+...     ...+.|+++|-
T Consensus        98 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS  160 (277)
T 2rhc_B           98 GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIAS  160 (277)
T ss_dssp             CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECC
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECc
Confidence            37899999999754211   22   2445677777666666665433     13466777653

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=97.05  E-value=0.0025  Score=57.24  Aligned_cols=114  Identities=20%  Similarity=0.262  Sum_probs=67.0

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEE-eCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC------
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLY-DVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT------   87 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~-D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~------   87 (369)
                      ++|.|+||+|++|..++..|+..+.  ++++. +.+..  .....++...  ..++..+. .-+|   ++++++      
T Consensus         2 k~vlVTGasggiG~~la~~l~~~G~--~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (244)
T 1edo_A            2 PVVVVTGASRGIGKAIALSLGKAGC--KVLVNYARSAKAAEEVSKQIEAY--GGQAITFGGDVSKEADVEAMMKTAIDAW   77 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHH--TCEEEEEECCTTSHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            4899999999999999999999987  88884 66542  2222233221  12333322 1122   223333      


Q ss_pred             -CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 017551           88 -GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  138 (369)
Q Consensus        88 -~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN  138 (369)
                       +.|+||..||.....   ..+   ....+..|+.....+.+.+..+   ...+.++++|.
T Consensus        78 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS  138 (244)
T 1edo_A           78 GTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIAS  138 (244)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             CCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECC
Confidence             789999999875432   122   2345566766554444444332   23566777653

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=97.05  E-value=0.0019  Score=58.18  Aligned_cols=114  Identities=18%  Similarity=0.280  Sum_probs=68.3

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT------   87 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~------   87 (369)
                      .++|.|+||+|++|..++..|+..+.  +|+++|.+..  .....++.... ..++.... .-+|   +.++++      
T Consensus         7 ~~~vlVtGasggiG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (248)
T 2pnf_A            7 GKVSLVTGSTRGIGRAIAEKLASAGS--TVIITGTSGERAKAVAEEIANKY-GVKAHGVEMNLLSEESINKAFEEIYNLV   83 (248)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhc-CCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            45899999999999999999999987  9999998752  22222332211 12333221 1122   333343      


Q ss_pred             -CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHH----HHHhhhCCCeEEEEec
Q 017551           88 -GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLC----EGIAKCCPNATVNLIS  137 (369)
Q Consensus        88 -~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~~i~----~~i~~~~p~a~viv~t  137 (369)
                       +.|+||..||.....   ..+   ....+..|+.....+.    +.+.+. ..+.++++|
T Consensus        84 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~iv~~s  143 (248)
T 2pnf_A           84 DGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQ-RWGRIVNIS  143 (248)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHH-TCEEEEEEC
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCcEEEEEc
Confidence             899999999875421   122   2345667766664444    444433 345666665

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=97.04  E-value=0.0032  Score=59.84  Aligned_cols=117  Identities=19%  Similarity=0.184  Sum_probs=68.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-------   86 (369)
                      .++|.|+||+|+||..++..|+..|.  +|++.|.+..  .....++........+..+. .-+|   ..+++       
T Consensus         8 ~k~vlVTGas~gIG~~la~~l~~~G~--~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   85 (319)
T 3ioy_A            8 GRTAFVTGGANGVGIGLVRQLLNQGC--KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF   85 (319)
T ss_dssp             TCEEEEETTTSTHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCEEEEcCCchHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence            45899999999999999999999998  8999999862  22233333221112344332 1223   22233       


Q ss_pred             CCCcEEEEcCCCCCC-C--CCC---HHHHHHHHHHH----HHHHHHHHhhh-----CCCeEEEEecC
Q 017551           87 TGMDLVIIPAGVPRK-P--GMT---RDDLFNINAGI----VRTLCEGIAKC-----CPNATVNLISN  138 (369)
Q Consensus        87 ~~ADiVii~ag~p~k-~--g~~---r~~~~~~N~~i----~~~i~~~i~~~-----~p~a~viv~tN  138 (369)
                      ...|+||..||+... +  ..+   ....+..|+.-    .+.+.+.+.+.     ...+.|+++|-
T Consensus        86 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS  152 (319)
T 3ioy_A           86 GPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTAS  152 (319)
T ss_dssp             CCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECC
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecc
Confidence            366999999997432 1  122   23455666444    44444444433     13566777653

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=97.04  E-value=0.0049  Score=57.15  Aligned_cols=115  Identities=15%  Similarity=0.182  Sum_probs=69.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC------------------chhHHHHhhcccCCCeEEEEe-CCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN------------------TPGVTADISHMDTGAVVRGFL-GQP   80 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~------------------~~g~~~dL~~~~~~~~v~~~~-~t~   80 (369)
                      .+.+.|+||+|+||..++..|++.|.  +|+++|.+.                  .......+...  ..++..+. .-+
T Consensus        11 ~k~~lVTGas~gIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~   86 (286)
T 3uve_A           11 GKVAFVTGAARGQGRSHAVRLAQEGA--DIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH--NRRIVTAEVDVR   86 (286)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT--TCCEEEEECCTT
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeccccccccccccccccCCHHHHHHHHHHHhhc--CCceEEEEcCCC
Confidence            46899999999999999999999998  999999872                  11111222221  23444332 123


Q ss_pred             Ch---hhhc-------CCCcEEEEcCCCCCCCC----CCH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 017551           81 QL---ENAL-------TGMDLVIIPAGVPRKPG----MTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        81 dl---~~al-------~~ADiVii~ag~p~k~g----~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      |.   ++++       ...|++|..||......    .+.   ...+..|+.    +.+.+.+.+.+....+.|+++|-
T Consensus        87 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS  165 (286)
T 3uve_A           87 DYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSS  165 (286)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECc
Confidence            32   2222       37899999999754322    222   334556654    44445555555555677777764

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=97.03  E-value=0.012  Score=54.33  Aligned_cols=116  Identities=15%  Similarity=0.127  Sum_probs=70.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC-CCeEEEEe-CCCCh---hhhc------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFL-GQPQL---ENAL------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~-~~~v~~~~-~t~dl---~~al------   86 (369)
                      .++|.|+||+|+||..++..|+..+.  +|++.|.+.  ......++..... ...+..+. .-+|.   .+++      
T Consensus        11 ~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (281)
T 3svt_A           11 DRTYLVTGGGSGIGKGVAAGLVAAGA--SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW   88 (281)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999997  899999886  2333444443221 12444432 12332   2222      


Q ss_pred             -CCCcEEEEcCCCCCCCC----CCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEec
Q 017551           87 -TGMDLVIIPAGVPRKPG----MTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLIS  137 (369)
Q Consensus        87 -~~ADiVii~ag~p~k~g----~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~t  137 (369)
                       ...|++|..||.....+    .+.   ...+..|+.-...+.+.+..+   ...+.|+++|
T Consensus        89 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~is  150 (281)
T 3svt_A           89 HGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGIS  150 (281)
T ss_dssp             HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEe
Confidence             36799999998632221    222   345566765554444443332   3456777765

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=97.03  E-value=0.0023  Score=58.55  Aligned_cols=115  Identities=15%  Similarity=0.158  Sum_probs=67.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT------   87 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~------   87 (369)
                      .++|.|+||+|++|..++..|+..+.  +|++.|.+..  .....++.... ..++..+. .-+|   +.++++      
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (263)
T 3ai3_A            7 GKVAVITGSSSGIGLAIAEGFAKEGA--HIVLVARQVDRLHEAARSLKEKF-GVRVLEVAVDVATPEGVDAVVESVRSSF   83 (263)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999987  8999998762  22223332210 12333222 1223   223333      


Q ss_pred             -CCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHH----HHHHHHHhhhCCCeEEEEecC
Q 017551           88 -GMDLVIIPAGVPRKP---GMTR---DDLFNINAGIV----RTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        88 -~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tN  138 (369)
                       +.|+||..||.....   ..+.   ...+..|+...    +.+.+.+.+.. .+.|+++|.
T Consensus        84 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS  144 (263)
T 3ai3_A           84 GGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARG-GGAIIHNAS  144 (263)
T ss_dssp             SSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECc
Confidence             799999999875321   1222   33455565444    44444444433 466776653

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=97.03  E-value=0.002  Score=58.64  Aligned_cols=115  Identities=17%  Similarity=0.182  Sum_probs=68.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeC-CC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC-----
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV-VN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT-----   87 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~-~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~-----   87 (369)
                      .++|.|+||+|++|+.++..|+..+.  +|++.|. +.  ......++...  ..++..+. .-+|   +.++++     
T Consensus         7 ~k~vlITGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (261)
T 1gee_A            7 GKVVVITGSSTGLGKSMAIRFATEKA--KVVVNYRSKEDEANSVLEEIKKV--GGEAIAVKGDVTVESDVINLVQSAIKE   82 (261)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEcCCChHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            45899999999999999999999987  8999998 54  22222333321  23333332 1122   223333     


Q ss_pred             --CCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHH----HHHHHhhhCCCeEEEEecC
Q 017551           88 --GMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRT----LCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        88 --~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i~~~----i~~~i~~~~p~a~viv~tN  138 (369)
                        +.|+||..||.....   ..+.   ...+..|+.....    +.+.+.+..+.+.++++|.
T Consensus        83 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS  145 (261)
T 1gee_A           83 FGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSS  145 (261)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECC
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCC
Confidence              789999999875321   1222   3345566544444    4444444333566776653

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=97.02  E-value=0.0011  Score=61.96  Aligned_cols=64  Identities=19%  Similarity=0.272  Sum_probs=47.9

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      |||+|||+ |.+|+.++..|...+.  +|.++|.+....  ..+...    .+..   ++++.++++++|+||++.
T Consensus         1 m~i~iiG~-G~mG~~~a~~l~~~g~--~V~~~~~~~~~~--~~~~~~----g~~~---~~~~~~~~~~~Dvvi~~v   64 (296)
T 2gf2_A            1 MPVGFIGL-GNMGNPMAKNLMKHGY--PLIIYDVFPDAC--KEFQDA----GEQV---VSSPADVAEKADRIITML   64 (296)
T ss_dssp             CCEEEECC-STTHHHHHHHHHHTTC--CEEEECSSTHHH--HHHHTT----TCEE---CSSHHHHHHHCSEEEECC
T ss_pred             CeEEEEec-cHHHHHHHHHHHHCCC--EEEEEeCCHHHH--HHHHHc----CCee---cCCHHHHHhcCCEEEEeC
Confidence            58999999 9999999999998887  899999976221  122221    1222   346778889999999984

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=97.02  E-value=0.00095  Score=67.39  Aligned_cols=113  Identities=12%  Similarity=0.052  Sum_probs=69.6

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchh-----HHHHhhcc-------cCCCeEEEEeC----CCCh
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG-----VTADISHM-------DTGAVVRGFLG----QPQL   82 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g-----~~~dL~~~-------~~~~~v~~~~~----t~dl   82 (369)
                      .+++|.|+||+|++|+.++..|...+.  +|++++......     ....+...       ....++..+.+    ..++
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~--~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l  226 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSH--RIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV  226 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEE--EEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSC
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCC--EEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccC
Confidence            457999999999999999999965555  899998876211     11111110       01234444321    1222


Q ss_pred             hhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           83 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        83 ~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      . ++.++|+||.+|+... .......+...|+...+.+++.+.+ .. ..++++|
T Consensus       227 ~-~~~~~D~Vih~Aa~~~-~~~~~~~~~~~Nv~gt~~ll~~a~~-~~-~~~v~iS  277 (508)
T 4f6l_B          227 V-LPENMDTIIHAGARTD-HFGDDDEFEKVNVQGTVDVIRLAQQ-HH-ARLIYVS  277 (508)
T ss_dssp             C-CSSCCSEEEECCCC---------CCHHHHHHHHHHHHHHHHT-TT-CEEEEEE
T ss_pred             C-CccCCCEEEECCceec-CCCCHHHHhhhHHHHHHHHHHHHHh-CC-CcEEEeC
Confidence            2 5689999999988653 1223445567899999999999887 33 3344443

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=97.01  E-value=0.0086  Score=55.46  Aligned_cols=115  Identities=16%  Similarity=0.177  Sum_probs=69.6

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc------
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL------   86 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al------   86 (369)
                      +.++|.|+||+|++|..++..|+..+.  +|++.|.+..  .....++...   .++..+. .-+|   +++++      
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGA--RVFICARDAEACADTATRLSAY---GDCQAIPADLSSEAGARRLAQALGEL  102 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHTTS---SCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc---CceEEEEeeCCCHHHHHHHHHHHHHh
Confidence            346899999999999999999999987  8999998762  2223333321   1333221 1122   22222      


Q ss_pred             -CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHH----HHHHHHHhhhCC---CeEEEEecC
Q 017551           87 -TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIV----RTLCEGIAKCCP---NATVNLISN  138 (369)
Q Consensus        87 -~~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~----~~i~~~i~~~~p---~a~viv~tN  138 (369)
                       ...|++|..||.....   ..+   ....+..|+.-.    +.+.+.+.+...   .+.|+++|-
T Consensus       103 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS  168 (276)
T 2b4q_A          103 SARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGS  168 (276)
T ss_dssp             CSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECC
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECC
Confidence             3789999999865321   122   234556665544    555555555432   166777653

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=97.01  E-value=0.002  Score=58.43  Aligned_cols=114  Identities=18%  Similarity=0.247  Sum_probs=69.3

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeC-CC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhhc------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV-VN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~-~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al------   86 (369)
                      .++|.|+||+|++|..++..|+..+.  +|++.|. +.  ......++...  ..++..+. .-+|   .++++      
T Consensus         4 ~k~vlVTGas~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (246)
T 2uvd_A            4 GKVALVTGASRGIGRAIAIDLAKQGA--NVVVNYAGNEQKANEVVDEIKKL--GSDAIAVRADVANAEDVTNMVKQTVDV   79 (246)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45899999999999999999999987  8999998 54  22222333321  12333322 1223   22233      


Q ss_pred             -CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 017551           87 -TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        87 -~~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN  138 (369)
                       .+.|++|..||.....   ..+   ....+..|+.-    .+.+.+.+.+.. .+.|+++|-
T Consensus        80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS  141 (246)
T 2uvd_A           80 FGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQR-HGRIVNIAS  141 (246)
T ss_dssp             HSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECC
Confidence             3799999999975421   122   23455666555    555555555443 466776653

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=97.01  E-value=0.0036  Score=57.54  Aligned_cols=69  Identities=12%  Similarity=0.026  Sum_probs=49.1

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCChhhhcCCCcEEEEcCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~dl~~al~~ADiVii~ag~   98 (369)
                      +|||.|+|| |++|++++..|...+.  +|+.++.+.....  .+..    ..++.+. .-+|+.  ++++|+||.+|+.
T Consensus         5 ~~~ilVtGa-G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~--~~~~----~~~~~~~~D~~d~~--~~~~d~vi~~a~~   73 (286)
T 3ius_A            5 TGTLLSFGH-GYTARVLSRALAPQGW--RIIGTSRNPDQME--AIRA----SGAEPLLWPGEEPS--LDGVTHLLISTAP   73 (286)
T ss_dssp             CCEEEEETC-CHHHHHHHHHHGGGTC--EEEEEESCGGGHH--HHHH----TTEEEEESSSSCCC--CTTCCEEEECCCC
T ss_pred             cCcEEEECC-cHHHHHHHHHHHHCCC--EEEEEEcChhhhh--hHhh----CCCeEEEecccccc--cCCCCEEEECCCc
Confidence            369999998 9999999999999887  9999998763221  1221    1233322 224443  8999999999875


Q ss_pred             C
Q 017551           99 P   99 (369)
Q Consensus        99 p   99 (369)
                      .
T Consensus        74 ~   74 (286)
T 3ius_A           74 D   74 (286)
T ss_dssp             B
T ss_pred             c
Confidence            4

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=97.00  E-value=0.0067  Score=56.14  Aligned_cols=116  Identities=19%  Similarity=0.290  Sum_probs=72.5

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC----
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT----   87 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~---~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~----   87 (369)
                      +.+++.|+||+|+||..++..|+..|.  +|++.|.+.   ......++...  ..++..+. .-+|   .+++++    
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~  105 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGA--AVALTYVNAAERAQAVVSEIEQA--GGRAVAIRADNRDAEAIEQAIRETVE  105 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            456899999999999999999999998  899998765   22233334332  22333322 1223   223333    


Q ss_pred             ---CCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 017551           88 ---GMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  138 (369)
Q Consensus        88 ---~ADiVii~ag~p~k~g---~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN  138 (369)
                         ..|++|..||......   .+   ....+..|+.-...+.+.+..+- ..+.|++++-
T Consensus       106 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS  166 (271)
T 3v2g_A          106 ALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS  166 (271)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred             HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence               7899999999754221   22   23456677766666666665553 3566776653

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=96.99  E-value=0.0085  Score=53.98  Aligned_cols=117  Identities=15%  Similarity=0.161  Sum_probs=68.7

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeC-C--CCh---hh------
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-Q--PQL---EN------   84 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~-t--~dl---~~------   84 (369)
                      +.+++.|+||+|++|..++..|+..+.  +|+++|.+.  ......++.... ......... .  +|.   .+      
T Consensus        13 ~~k~vlITGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~d~d~~~~~~~~~~~~~~~   89 (247)
T 3i1j_A           13 KGRVILVTGAARGIGAAAARAYAAHGA--SVVLLGRTEASLAEVSDQIKSAG-QPQPLIIALNLENATAQQYRELAARVE   89 (247)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT-SCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEecCHHHHHHHHHHHHhcC-CCCceEEEeccccCCHHHHHHHHHHHH
Confidence            346899999999999999999999998  899999986  222233333221 112222111 1  221   11      


Q ss_pred             -hcCCCcEEEEcCCCCC--CC--CCC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 017551           85 -ALTGMDLVIIPAGVPR--KP--GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  138 (369)
Q Consensus        85 -al~~ADiVii~ag~p~--k~--g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN  138 (369)
                       .+...|++|..||...  .+  ..+   ....+..|+.-...+.+.+..+   ...+.|+++|-
T Consensus        90 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS  154 (247)
T 3i1j_A           90 HEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSS  154 (247)
T ss_dssp             HHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECC
T ss_pred             HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcc
Confidence             2237899999998642  22  122   2344566655555554444322   24566777653

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=96.99  E-value=0.0031  Score=57.76  Aligned_cols=115  Identities=20%  Similarity=0.211  Sum_probs=70.3

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCCh---hhhc------
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENAL------   86 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl---~~al------   86 (369)
                      +.+++.|+||+|++|..++..|+..|.  +|++.|.+.  ......++...  ..++..+. .-+|.   ++.+      
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~   86 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGA--SVVVTDLKSEGAEAVAAAIRQA--GGKAIGLECNVTDEQHREAVIKAALDQ   86 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            346899999999999999999999987  899999986  23333334332  23333332 12232   2222      


Q ss_pred             -CCCcEEEEcCCCCCCC--CCCH---HHHHHHHHHHHHHHHHH----HhhhCCCeEEEEecC
Q 017551           87 -TGMDLVIIPAGVPRKP--GMTR---DDLFNINAGIVRTLCEG----IAKCCPNATVNLISN  138 (369)
Q Consensus        87 -~~ADiVii~ag~p~k~--g~~r---~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tN  138 (369)
                       ...|++|..||.....  ..+.   ...+..|+.-...+.+.    +.+. ..+.|+++|-
T Consensus        87 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS  147 (256)
T 3gaf_A           87 FGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKA-GGGAILNISS  147 (256)
T ss_dssp             HSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred             cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcC
Confidence             3789999999874321  2232   33456665544444444    4433 4567777754

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=96.99  E-value=0.0016  Score=54.82  Aligned_cols=100  Identities=9%  Similarity=-0.005  Sum_probs=59.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-chh-HHHHhhcccCCCeEEEEeC-CCC---hhhh-cCCCcEE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPG-VTADISHMDTGAVVRGFLG-QPQ---LENA-LTGMDLV   92 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-~~g-~~~dL~~~~~~~~v~~~~~-t~d---l~~a-l~~ADiV   92 (369)
                      ..+|.|+|+ |.+|+.++..|...+.  +++++|.+. ... ...+....    .+....+ .++   +.++ +++||.|
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~--~V~vid~~~~~~~~~~~~~~~~----~~~~i~gd~~~~~~l~~a~i~~ad~v   75 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQ--NVTVISNLPEDDIKQLEQRLGD----NADVIPGDSNDSSVLKKAGIDRCRAI   75 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTC--CEEEEECCCHHHHHHHHHHHCT----TCEEEESCTTSHHHHHHHTTTTCSEE
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCC--CEEEEECCChHHHHHHHHhhcC----CCeEEEcCCCCHHHHHHcChhhCCEE
Confidence            458999998 9999999999998887  899999974 211 11111111    1122211 122   3344 8999999


Q ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEE-ecCCCC
Q 017551           93 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL-ISNPVN  141 (369)
Q Consensus        93 ii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv-~tNPv~  141 (369)
                      |++.+-.           ..|..    ++..+++..|+..++. +.||..
T Consensus        76 i~~~~~d-----------~~n~~----~~~~a~~~~~~~~ii~~~~~~~~  110 (153)
T 1id1_A           76 LALSDND-----------ADNAF----VVLSAKDMSSDVKTVLAVSDSKN  110 (153)
T ss_dssp             EECSSCH-----------HHHHH----HHHHHHHHTSSSCEEEECSSGGG
T ss_pred             EEecCCh-----------HHHHH----HHHHHHHHCCCCEEEEEECCHHH
Confidence            9985211           33432    3344455667665544 456653

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=96.98  E-value=0.0042  Score=56.08  Aligned_cols=114  Identities=22%  Similarity=0.225  Sum_probs=67.4

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCC-C--chhHHHHhhcccCCCeEEEEeC-CCC---hhhhcC-----
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-N--TPGVTADISHMDTGAVVRGFLG-QPQ---LENALT-----   87 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~-~--~~g~~~dL~~~~~~~~v~~~~~-t~d---l~~al~-----   87 (369)
                      .++|.|+||+|++|+.++..|+..+.  +|+++|.+ .  ......++...  ..++..+.. -+|   ++++++     
T Consensus         7 ~k~vlVTGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (258)
T 3afn_B            7 GKRVLITGSSQGIGLATARLFARAGA--KVGLHGRKAPANIDETIASMRAD--GGDAAFFAADLATSEACQQLVDEFVAK   82 (258)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCCTTHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEECCCchhhHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            45899999999999999999999987  89999997 4  22223333321  234443321 122   233444     


Q ss_pred             --CCcEEEEcCCC-CC-CC--CCC---HHHHHHHHHHHHHHHHH----HHhhh----CCCeEEEEec
Q 017551           88 --GMDLVIIPAGV-PR-KP--GMT---RDDLFNINAGIVRTLCE----GIAKC----CPNATVNLIS  137 (369)
Q Consensus        88 --~ADiVii~ag~-p~-k~--g~~---r~~~~~~N~~i~~~i~~----~i~~~----~p~a~viv~t  137 (369)
                        +.|+||..||. .. .+  ..+   ....+..|+.....+.+    .+.+.    .+...+++++
T Consensus        83 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~s  149 (258)
T 3afn_B           83 FGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTG  149 (258)
T ss_dssp             HSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEEC
T ss_pred             cCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEec
Confidence              89999999986 32 11  122   23345556544444433    44322    2236666665

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=96.98  E-value=0.0047  Score=57.27  Aligned_cols=113  Identities=18%  Similarity=0.179  Sum_probs=68.0

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC-------
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT-------   87 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~-------   87 (369)
                      +++.|+||+|++|..++..|+..|.  +|++.|.+..  .....++...   ..+..+. .-+|   ..++++       
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   96 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGW--SLVLTGRREERLQALAGELSAK---TRVLPLTLDVRDRAAMSAAVDNLPEEFA   96 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHTTT---SCEEEEECCTTCHHHHHHHHHTCCGGGS
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhhcC---CcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            5899999999999999999999987  8999999762  2223333321   2333221 1122   233343       


Q ss_pred             CCcEEEEcCCCCCC--C--CCC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 017551           88 GMDLVIIPAGVPRK--P--GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        88 ~ADiVii~ag~p~k--~--g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      ..|++|..||....  +  ..+   ....+..|+.-    .+.+.+.+.+......|+++|-
T Consensus        97 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS  158 (272)
T 2nwq_A           97 TLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGS  158 (272)
T ss_dssp             SCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECC
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence            35999999997532  2  122   23345566544    5555555555543325666653

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.98  E-value=0.0018  Score=59.73  Aligned_cols=116  Identities=17%  Similarity=0.175  Sum_probs=65.6

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhc-ccCCCeEEEEe-CCCC---hhhhcC-----
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISH-MDTGAVVRGFL-GQPQ---LENALT-----   87 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~-~~~~~~v~~~~-~t~d---l~~al~-----   87 (369)
                      .++|.|+||+|++|..++..|+..|.  +|++.|.+..  .....++.. .....++..+. .-+|   ++++++     
T Consensus         6 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (278)
T 1spx_A            6 EKVAIITGSSNGIGRATAVLFAREGA--KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   83 (278)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence            35899999999999999999999987  9999998762  222233311 00112333322 1122   233444     


Q ss_pred             --CCcEEEEcCCCCCCC---CC----CH---HHHHHHHHHHHHHH----HHHHhhhCCCeEEEEecCC
Q 017551           88 --GMDLVIIPAGVPRKP---GM----TR---DDLFNINAGIVRTL----CEGIAKCCPNATVNLISNP  139 (369)
Q Consensus        88 --~ADiVii~ag~p~k~---g~----~r---~~~~~~N~~i~~~i----~~~i~~~~p~a~viv~tNP  139 (369)
                        +.|++|..||.....   ..    +.   ...+..|+.-...+    .+.+.+..  +.|+++|.-
T Consensus        84 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--g~iv~isS~  149 (278)
T 1spx_A           84 FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK--GEIVNISSI  149 (278)
T ss_dssp             HSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCT
T ss_pred             cCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEecc
Confidence              899999999864321   11    22   23455665444444    44443333  667777643

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=96.98  E-value=0.001  Score=61.00  Aligned_cols=67  Identities=18%  Similarity=0.257  Sum_probs=47.8

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      .+|||+|||+ |.+|+.++..|...+.  +|.++|.+....  .++.... .  +..   ++++.++++++|+||++.
T Consensus         2 ~~m~i~iiG~-G~mG~~~a~~l~~~g~--~v~~~~~~~~~~--~~~~~~~-g--~~~---~~~~~~~~~~~D~Vi~~v   68 (259)
T 2ahr_A            2 NAMKIGIIGV-GKMASAIIKGLKQTPH--ELIISGSSLERS--KEIAEQL-A--LPY---AMSHQDLIDQVDLVILGI   68 (259)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHTTSSC--EEEEECSSHHHH--HHHHHHH-T--CCB---CSSHHHHHHTCSEEEECS
T ss_pred             CccEEEEECC-CHHHHHHHHHHHhCCC--eEEEECCCHHHH--HHHHHHc-C--CEe---eCCHHHHHhcCCEEEEEe
Confidence            3579999998 9999999999988775  899999975221  1122110 1  111   356778889999999985

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=96.97  E-value=0.0019  Score=59.70  Aligned_cols=111  Identities=22%  Similarity=0.246  Sum_probs=68.5

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT------   87 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~------   87 (369)
                      .+++.|+||+|++|..++..|+..|.  +|++.|.+.  ......++.     ..+..+. .-+|   ..++++      
T Consensus        11 ~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (271)
T 3tzq_B           11 NKVAIITGACGGIGLETSRVLARAGA--RVVLADLPETDLAGAAASVG-----RGAVHHVVDLTNEVSVRALIDFTIDTF   83 (271)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECTTSCHHHHHHHHC-----TTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHhC-----CCeEEEECCCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999997  899999987  222333331     1111111 1122   223333      


Q ss_pred             -CCcEEEEcCCCCCC-C----CCC---HHHHHHHHHHHHHHHHHHH----hhhCCCeEEEEecC
Q 017551           88 -GMDLVIIPAGVPRK-P----GMT---RDDLFNINAGIVRTLCEGI----AKCCPNATVNLISN  138 (369)
Q Consensus        88 -~ADiVii~ag~p~k-~----g~~---r~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tN  138 (369)
                       ..|++|..||.... .    ..+   ....+..|+.-...+.+.+    .+. ..+.|+++|-
T Consensus        84 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~isS  146 (271)
T 3tzq_B           84 GRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISA-GGGAIVNISS  146 (271)
T ss_dssp             SCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred             CCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEECC
Confidence             78999999997522 2    122   2345667766555555544    433 4566777753

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=96.97  E-value=0.00089  Score=61.13  Aligned_cols=112  Identities=18%  Similarity=0.262  Sum_probs=66.9

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEeCCCC---hhhhc-------
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQ---LENAL-------   86 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~~t~d---l~~al-------   86 (369)
                      +.+++.|+||+|++|..++..|+..|.  +|++.|.+..  .....++....  ..+..  .-+|   .++++       
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~--Dv~d~~~v~~~~~~~~~~~   81 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGA--KVIGTATSESGAQAISDYLGDNG--KGMAL--NVTNPESIEAVLKAITDEF   81 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHGGGE--EEEEC--CTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhcccc--eEEEE--eCCCHHHHHHHHHHHHHHc
Confidence            345899999999999999999999998  8999999862  22222332211  11111  1122   22233       


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHH----HHHHHhhhCCCeEEEEec
Q 017551           87 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRT----LCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~~----i~~~i~~~~p~a~viv~t  137 (369)
                      ...|++|..||.....   ..+   ....+..|+.-...    +.+.+.+. ..+.|+++|
T Consensus        82 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-~~g~iv~is  141 (248)
T 3op4_A           82 GGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKK-RQGRIINVG  141 (248)
T ss_dssp             CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEC
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEEc
Confidence            3799999999975422   122   23345666554444    44444443 346677665

>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6

Probab=96.96  E-value=0.0028  Score=61.02  Aligned_cols=65  Identities=25%  Similarity=0.312  Sum_probs=46.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      .+||+|||+ |.+|..++..|...+.  +|+++|.+.....  +..... .  +..   + ++.+++++||+||++.
T Consensus        16 ~~~I~IIG~-G~mG~alA~~L~~~G~--~V~~~~~~~~~~~--~~a~~~-G--~~~---~-~~~e~~~~aDvVilav   80 (338)
T 1np3_A           16 GKKVAIIGY-GSQGHAHACNLKDSGV--DVTVGLRSGSATV--AKAEAH-G--LKV---A-DVKTAVAAADVVMILT   80 (338)
T ss_dssp             TSCEEEECC-SHHHHHHHHHHHHTTC--CEEEECCTTCHHH--HHHHHT-T--CEE---E-CHHHHHHTCSEEEECS
T ss_pred             CCEEEEECc-hHHHHHHHHHHHHCcC--EEEEEECChHHHH--HHHHHC-C--CEE---c-cHHHHHhcCCEEEEeC
Confidence            468999999 9999999999999886  8999998762211  111111 1  122   1 4678899999999984

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=96.96  E-value=0.019  Score=52.36  Aligned_cols=115  Identities=14%  Similarity=0.121  Sum_probs=69.9

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCCh---hhhc------
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQL---ENAL------   86 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~dl---~~al------   86 (369)
                      +.++|.|+||+|++|..++..|+..+.  +|++.|.+..  .....++...  ..++..+. .-+|.   .+++      
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGA--SVYTCSRNQKELNDCLTQWRSK--GFKVEASVCDLSSRSERQELMNTVANH   83 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            346899999999999999999999987  8999998762  2223333321  23343332 12232   2222      


Q ss_pred             --CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHH----hhhCCCeEEEEecC
Q 017551           87 --TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGI----AKCCPNATVNLISN  138 (369)
Q Consensus        87 --~~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tN  138 (369)
                        ...|++|..||.....   ..+   ....+..|+.-...+.+.+    .+. ..+.|+++|-
T Consensus        84 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS  146 (260)
T 2ae2_A           84 FHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKAS-ERGNVVFISS  146 (260)
T ss_dssp             TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-SSEEEEEECC
T ss_pred             cCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcc
Confidence              5799999999975321   122   2345566765555554444    333 3466777653

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=96.96  E-value=0.0079  Score=55.62  Aligned_cols=116  Identities=17%  Similarity=0.206  Sum_probs=70.1

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCC-------------C--chhHHHHhhcccCCCeEEEEe-CCCCh
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-------------N--TPGVTADISHMDTGAVVRGFL-GQPQL   82 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~-------------~--~~g~~~dL~~~~~~~~v~~~~-~t~dl   82 (369)
                      +.+.+.|+||+|+||..++..|+..|.  +|+++|++             .  ......++...  ..++..+. .-+|.
T Consensus        14 ~gk~~lVTGas~gIG~a~a~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~   89 (280)
T 3pgx_A           14 QGRVAFITGAARGQGRSHAVRLAAEGA--DIIACDICAPVSASVTYAPASPEDLDETARLVEDQ--GRKALTRVLDVRDD   89 (280)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT--TCCEEEEECCTTCH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeccccccccccccccCHHHHHHHHHHHHhc--CCeEEEEEcCCCCH
Confidence            346899999999999999999999998  99999983             2  11222223322  23333322 12232


Q ss_pred             ---hhh-------cCCCcEEEEcCCCCCCC---CCCH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 017551           83 ---ENA-------LTGMDLVIIPAGVPRKP---GMTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        83 ---~~a-------l~~ADiVii~ag~p~k~---g~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                         ++.       +...|++|..||.....   ..+.   ...+..|+.    +.+.+.+.+.+....+.|+++|-
T Consensus        90 ~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS  165 (280)
T 3pgx_A           90 AALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSS  165 (280)
T ss_dssp             HHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECC
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcc
Confidence               222       23789999999975321   1222   334556654    44555555565555677777764

>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}

Probab=96.95  E-value=0.0017  Score=60.93  Aligned_cols=119  Identities=13%  Similarity=0.137  Sum_probs=70.1

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhC-----C-CCcEEEEEeCCCchhHHHHhhc-cc----C-C-----CeEEEEeCCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKIN-----P-LVSVLHLYDVVNTPGVTADISH-MD----T-G-----AVVRGFLGQP   80 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~-----~-~~~el~L~D~~~~~g~~~dL~~-~~----~-~-----~~v~~~~~t~   80 (369)
                      ..+|||+|||+ |.+|+.++..|...     + .  +|.++|. ..  ....+.. ..    . .     .++..   ++
T Consensus         6 ~~~m~I~iiG~-G~mG~~~a~~L~~~~~~~~g~~--~V~~~~r-~~--~~~~l~~~~g~~~~~~~~~~~~~~~~~---~~   76 (317)
T 2qyt_A            6 QQPIKIAVFGL-GGVGGYYGAMLALRAAATDGLL--EVSWIAR-GA--HLEAIRAAGGLRVVTPSRDFLARPTCV---TD   76 (317)
T ss_dssp             -CCEEEEEECC-SHHHHHHHHHHHHHHHHTTSSE--EEEEECC-HH--HHHHHHHHTSEEEECSSCEEEECCSEE---ES
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHhCccccCCCC--CEEEEEc-HH--HHHHHHhcCCeEEEeCCCCeEEecceE---ec
Confidence            34579999999 99999999999887     6 5  9999997 41  1222222 10    0 0     01111   13


Q ss_pred             ChhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCChhHHHHHHHHHhCCCCC
Q 017551           81 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDP  159 (369)
Q Consensus        81 dl~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~  159 (369)
                      +. ++++++|+||++...+    .            +.++++.+..+- |+..|+.++|-.+..     +.+.+.  ++.
T Consensus        77 ~~-~~~~~~D~vil~vk~~----~------------~~~v~~~i~~~l~~~~~iv~~~nG~~~~-----~~l~~~--l~~  132 (317)
T 2qyt_A           77 NP-AEVGTVDYILFCTKDY----D------------MERGVAEIRPMIGQNTKILPLLNGADIA-----ERMRTY--LPD  132 (317)
T ss_dssp             CH-HHHCCEEEEEECCSSS----C------------HHHHHHHHGGGEEEEEEEEECSCSSSHH-----HHHTTT--SCT
T ss_pred             Cc-cccCCCCEEEEecCcc----c------------HHHHHHHHHhhcCCCCEEEEccCCCCcH-----HHHHHH--CCC
Confidence            43 5678999999985222    1            234445555543 567777778876542     223332  555


Q ss_pred             CcEE-Eechhc
Q 017551          160 KKLL-GVTMLD  169 (369)
Q Consensus       160 ~kvi-G~t~Ld  169 (369)
                      .+++ |+++.+
T Consensus       133 ~~v~~g~~~~~  143 (317)
T 2qyt_A          133 TVVWKGCVYIS  143 (317)
T ss_dssp             TTBCEEEEEEE
T ss_pred             CcEEEEEEEEE
Confidence            5544 445544

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=96.95  E-value=0.0043  Score=57.40  Aligned_cols=113  Identities=17%  Similarity=0.258  Sum_probs=68.0

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-------   86 (369)
                      .+.+.|+||+|+||..++..|+..|.  +|++.|.+.  ......++....  .++..+. .-+|   .++++       
T Consensus        28 ~k~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~  103 (270)
T 3ftp_A           28 KQVAIVTGASRGIGRAIALELARRGA--MVIGTATTEAGAEGIGAAFKQAG--LEGRGAVLNVNDATAVDALVESTLKEF  103 (270)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHHT--CCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999998  999999986  222333343321  1222111 1122   22222       


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHH----HHhhhCCCeEEEEec
Q 017551           87 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCE----GIAKCCPNATVNLIS  137 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~~i~~----~i~~~~p~a~viv~t  137 (369)
                      ...|++|..||.....   ..+   ....+..|+.-...+.+    .+.+. ..+.|+++|
T Consensus       104 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~is  163 (270)
T 3ftp_A          104 GALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKA-RGGRIVNIT  163 (270)
T ss_dssp             SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEC
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEEC
Confidence            3789999999975422   122   23445667654444444    44433 456677765

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=96.95  E-value=0.0038  Score=57.48  Aligned_cols=116  Identities=15%  Similarity=0.087  Sum_probs=69.0

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeC-CC--chhHHHHhhcccCCCeEEEEe-CCCC-------hhhhc--
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV-VN--TPGVTADISHMDTGAVVRGFL-GQPQ-------LENAL--   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~-~~--~~g~~~dL~~~~~~~~v~~~~-~t~d-------l~~al--   86 (369)
                      .+++.|+||+|++|..++..|+..|.  +|+++|. +.  ......++.... ..++..+. .-+|       ..+++  
T Consensus        11 ~k~~lVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~   87 (276)
T 1mxh_A           11 CPAAVITGGARRIGHSIAVRLHQQGF--RVVVHYRHSEGAAQRLVAELNAAR-AGSAVLCKGDLSLSSSLLDCCEDIIDC   87 (276)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCChHHHHHHHHHHHHhc-CCceEEEeccCCCccccHHHHHHHHHH
Confidence            35899999999999999999999987  9999998 65  222233332210 12233221 1122       22222  


Q ss_pred             -----CCCcEEEEcCCCCCCC---CCC--------------HHHHHHHHHHHHHHHHHHHhhhC--CC------eEEEEe
Q 017551           87 -----TGMDLVIIPAGVPRKP---GMT--------------RDDLFNINAGIVRTLCEGIAKCC--PN------ATVNLI  136 (369)
Q Consensus        87 -----~~ADiVii~ag~p~k~---g~~--------------r~~~~~~N~~i~~~i~~~i~~~~--p~------a~viv~  136 (369)
                           ...|++|..||.....   ..+              ....+..|+.....+.+.+..+.  ..      +.|+++
T Consensus        88 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~i  167 (276)
T 1mxh_A           88 SFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNL  167 (276)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEE
T ss_pred             HHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEE
Confidence                 3789999999964321   111              23456677766666666655542  22      667777


Q ss_pred             cC
Q 017551          137 SN  138 (369)
Q Consensus       137 tN  138 (369)
                      |-
T Consensus       168 sS  169 (276)
T 1mxh_A          168 CD  169 (276)
T ss_dssp             CC
T ss_pred             Cc
Confidence            64

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=96.94  E-value=0.0023  Score=59.56  Aligned_cols=112  Identities=16%  Similarity=0.183  Sum_probs=66.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-------   86 (369)
                      .+.+.|+||+|+||..++..|+..|.  +|++.|.+..  .....++.     .++..+. .-+|   .++++       
T Consensus        27 ~k~vlVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~~~~~   99 (277)
T 4dqx_A           27 QRVCIVTGGGSGIGRATAELFAKNGA--YVVVADVNEDAAVRVANEIG-----SKAFGVRVDVSSAKDAESMVEKTTAKW   99 (277)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHC-----TTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhC-----CceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999998  9999998762  22222221     1222221 1122   22223       


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 017551           87 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  138 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN  138 (369)
                      ...|++|..||.....   ..+   ....+..|+.-...+.+.+..+   ...+.|+++|-
T Consensus       100 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS  160 (277)
T 4dqx_A          100 GRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTS  160 (277)
T ss_dssp             SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECC
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECc
Confidence            3789999999974321   122   2344566765544444444322   23466777753

>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}

Probab=96.94  E-value=0.00094  Score=62.80  Aligned_cols=109  Identities=14%  Similarity=0.147  Sum_probs=69.2

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhc-CCCcEEEEcCCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL-TGMDLVIIPAGVP   99 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al-~~ADiVii~ag~p   99 (369)
                      |||+|||+ |.+|+.++..|...+.  +|.++|.+...   .++.+...........   +..+++ +++|+||++.   
T Consensus         3 mkI~iiGa-Ga~G~~~a~~L~~~g~--~V~~~~r~~~~---~~~~~~~g~~~~~~~~---~~~~~~~~~~D~vilav---   70 (294)
T 3g17_A            3 LSVAIIGP-GAVGTTIAYELQQSLP--HTTLIGRHAKT---ITYYTVPHAPAQDIVV---KGYEDVTNTFDVIIIAV---   70 (294)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHHCT--TCEEEESSCEE---EEEESSTTSCCEEEEE---EEGGGCCSCEEEEEECS---
T ss_pred             cEEEEECC-CHHHHHHHHHHHHCCC--eEEEEEeccCc---EEEEecCCeeccceec---CchHhcCCCCCEEEEeC---
Confidence            69999999 9999999999998886  89999987511   0011111011112211   223555 8999999984   


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe
Q 017551          100 RKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  165 (369)
Q Consensus       100 ~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~  165 (369)
                       |+.            -+.++++.+..+. |+..|+.+.|-++...        .   +|.+++++-
T Consensus        71 -k~~------------~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~--------~---~~~~~v~~g  113 (294)
T 3g17_A           71 -KTH------------QLDAVIPHLTYLAHEDTLIILAQNGYGQLE--------H---IPFKNVCQA  113 (294)
T ss_dssp             -CGG------------GHHHHGGGHHHHEEEEEEEEECCSSCCCGG--------G---CCCSCEEEC
T ss_pred             -Ccc------------CHHHHHHHHHHhhCCCCEEEEeccCcccHh--------h---CCCCcEEEE
Confidence             111            1233444444443 6778888899988763        1   677888754

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=96.94  E-value=0.0074  Score=54.06  Aligned_cols=113  Identities=19%  Similarity=0.250  Sum_probs=67.4

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEE-eCCCc--hhHHHHhhcccCCCeEEE-Ee-CCCC---hhhh-------
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLY-DVVNT--PGVTADISHMDTGAVVRG-FL-GQPQ---LENA-------   85 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~-D~~~~--~g~~~dL~~~~~~~~v~~-~~-~t~d---l~~a-------   85 (369)
                      ++|.|+||+|++|..++..|+..+.  +|++. +.+..  .....++....  ..+.. +. .-+|   ++++       
T Consensus         2 k~vlITGasggiG~~~a~~l~~~G~--~v~~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (245)
T 2ph3_A            2 RKALITGASRGIGRAIALRLAEDGF--ALAIHYGQNREKAEEVAEEARRRG--SPLVAVLGANLLEAEAATALVHQAAEV   77 (245)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTC--EEEEEESSCHHHHHHHHHHHHHTT--CSCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcC--CceEEEEeccCCCHHHHHHHHHHHHHh
Confidence            4799999999999999999999887  88887 66542  22223333211  12221 11 1223   2222       


Q ss_pred             cCCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 017551           86 LTGMDLVIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        86 l~~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      +.+.|+||..||.....   ..+   ....+..|+..    .+.+.+.+.+.. .+.++++|.
T Consensus        78 ~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS  139 (245)
T 2ph3_A           78 LGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKAR-FGRIVNITS  139 (245)
T ss_dssp             HTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-CCEEEEEeC
Confidence            34799999999875421   122   23455667665    555556655443 456777654

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=96.94  E-value=0.0025  Score=59.26  Aligned_cols=112  Identities=18%  Similarity=0.135  Sum_probs=67.4

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCCh---hhh-------c
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQL---ENA-------L   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~dl---~~a-------l   86 (369)
                      .+++.|+||+|++|..++..|+..|.  +|++.|.+..  .....++.     ..+..+. .-+|.   .++       +
T Consensus        29 gk~vlVTGas~gIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~~~~~  101 (277)
T 3gvc_A           29 GKVAIVTGAGAGIGLAVARRLADEGC--HVLCADIDGDAADAAATKIG-----CGAAACRVDVSDEQQIIAMVDACVAAF  101 (277)
T ss_dssp             TCEEEETTTTSTHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHC-----SSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHcC-----CcceEEEecCCCHHHHHHHHHHHHHHc
Confidence            45799999999999999999999998  9999999862  22222331     1222211 12232   222       2


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 017551           87 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  138 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN  138 (369)
                      ...|++|..||.....   ..+   ....+..|+.-...+.+.+..+   ...+.||++|-
T Consensus       102 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS  162 (277)
T 3gvc_A          102 GGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSS  162 (277)
T ss_dssp             SSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcc
Confidence            3789999999874321   222   2345566765544444443322   34566777754

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=96.94  E-value=0.0054  Score=56.90  Aligned_cols=116  Identities=13%  Similarity=0.120  Sum_probs=70.6

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCCh---hhhc------
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENAL------   86 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl---~~al------   86 (369)
                      +.+.+.|+||+|++|..++..|+..|.  +|++.|.+.  ......++...  ..++..+. .-+|.   .+++      
T Consensus        23 ~~k~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~   98 (279)
T 3sju_A           23 RPQTAFVTGVSSGIGLAVARTLAARGI--AVYGCARDAKNVSAAVDGLRAA--GHDVDGSSCDVTSTDEVHAAVAAAVER   98 (279)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            345899999999999999999999987  899999986  23333444432  23344332 12232   2222      


Q ss_pred             -CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhh-----hCCCeEEEEecC
Q 017551           87 -TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAK-----CCPNATVNLISN  138 (369)
Q Consensus        87 -~~ADiVii~ag~p~k~g---~~---r~~~~~~N~~i~~~i~~~i~~-----~~p~a~viv~tN  138 (369)
                       ...|++|..||......   .+   ....+..|+.-...+.+.+..     ....+.||++|-
T Consensus        99 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS  162 (279)
T 3sju_A           99 FGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIAS  162 (279)
T ss_dssp             HCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECC
T ss_pred             cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECC
Confidence             36899999998753211   22   234556776665555555433     123466777753

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=96.94  E-value=0.011  Score=54.08  Aligned_cols=118  Identities=9%  Similarity=0.026  Sum_probs=73.3

Q ss_pred             CCCEEEEEcCCCc--cHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-----
Q 017551           19 AGFKVAILGAAGG--IGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-----   86 (369)
Q Consensus        19 ~~~KI~IiGA~G~--vGs~la~~l~~~~~~~el~L~D~~~-~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-----   86 (369)
                      +.+++.|+||+|+  +|..++..|+..+.  +|++.|.+. ......++.......++..+. .-+|   .++.+     
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   83 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGA--RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKE   83 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCC--EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHH
Confidence            3468999999977  99999999999998  899999876 222333333222111333221 1122   22222     


Q ss_pred             --CCCcEEEEcCCCCCC-----C--CCCH---HHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 017551           87 --TGMDLVIIPAGVPRK-----P--GMTR---DDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  138 (369)
Q Consensus        87 --~~ADiVii~ag~p~k-----~--g~~r---~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN  138 (369)
                        ...|++|..||....     +  ..+.   ...+..|+.-...+.+.+..+. +.+.|+++|-
T Consensus        84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS  148 (266)
T 3oig_A           84 QVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTY  148 (266)
T ss_dssp             HHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred             HhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEec
Confidence              368999999987541     1  1222   3456677777777777776654 3567777764

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=96.94  E-value=0.0099  Score=54.39  Aligned_cols=116  Identities=20%  Similarity=0.166  Sum_probs=70.2

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCCh---hhh-------
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENA-------   85 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl---~~a-------   85 (369)
                      +.++|.|+||+|++|..++..|+..|.  +|++.|.+.  ......++...  ...+..+. .-+|.   .++       
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~  103 (262)
T 3rkr_A           28 SGQVAVVTGASRGIGAAIARKLGSLGA--RVVLTARDVEKLRAVEREIVAA--GGEAESHACDLSHSDAIAAFATGVLAA  103 (262)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHh--CCceeEEEecCCCHHHHHHHHHHHHHh
Confidence            346899999999999999999999987  899999986  23333344332  23444332 12232   222       


Q ss_pred             cCCCcEEEEcCCCCCCCC----CC---HHHHHHHHHHHHHHHHHH----HhhhCCCeEEEEecCC
Q 017551           86 LTGMDLVIIPAGVPRKPG----MT---RDDLFNINAGIVRTLCEG----IAKCCPNATVNLISNP  139 (369)
Q Consensus        86 l~~ADiVii~ag~p~k~g----~~---r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tNP  139 (369)
                      +...|+||..||.....+    .+   ....+..|+.-...+.+.    +.+ ...+.|+++|--
T Consensus       104 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-~~~g~iv~isS~  167 (262)
T 3rkr_A          104 HGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIA-AKRGHIINISSL  167 (262)
T ss_dssp             HSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-TTCCEEEEECSS
T ss_pred             cCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCceEEEEech
Confidence            235899999998732221    22   234456665554444444    433 345667777643

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=96.93  E-value=0.014  Score=54.52  Aligned_cols=115  Identities=11%  Similarity=0.125  Sum_probs=73.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCCh---hhhc-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQL---ENAL-------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~dl---~~al-------   86 (369)
                      .++|.|+||+|+||..++..|+..+.  +|++.|.+..  .....++.... ..++..+. .-+|.   ++++       
T Consensus        47 gk~vlVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  123 (291)
T 3ijr_A           47 GKNVLITGGDSGIGRAVSIAFAKEGA--NIAIAYLDEEGDANETKQYVEKE-GVKCVLLPGDLSDEQHCKDIVQETVRQL  123 (291)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHTT-TCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCchHHHHHHHHHHHhc-CCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999997  8999999862  11222222111 23444332 12232   2222       


Q ss_pred             CCCcEEEEcCCCCCCCC----CC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEec
Q 017551           87 TGMDLVIIPAGVPRKPG----MT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS  137 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~g----~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t  137 (369)
                      ...|++|..||.....+    .+   ....+..|+.-...+.+.+..+- ..+.|+++|
T Consensus       124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is  182 (291)
T 3ijr_A          124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA  182 (291)
T ss_dssp             SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred             CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence            37899999988643221    22   34567788877777777776653 345677665

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=96.93  E-value=0.0066  Score=54.53  Aligned_cols=115  Identities=20%  Similarity=0.221  Sum_probs=68.2

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCc-----EEEEEeCCCc--hhHHHHhhcccCCCeEEEEeC-CCC---hhhhc---
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVNT--PGVTADISHMDTGAVVRGFLG-QPQ---LENAL---   86 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~-----el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~~-t~d---l~~al---   86 (369)
                      ++|.|+||+|++|..++..|+..+...     +|++.|.+..  .....++...  ..++..+.. -+|   +.+++   
T Consensus         3 k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~   80 (244)
T 2bd0_A            3 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTDTITADISDMADVRRLTTHI   80 (244)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT--TCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHcc--CCeeeEEEecCCCHHHHHHHHHHH
Confidence            579999999999999999998877522     7899998752  2222333321  234443321 123   22233   


Q ss_pred             ----CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHH----hhhCCCeEEEEecC
Q 017551           87 ----TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGI----AKCCPNATVNLISN  138 (369)
Q Consensus        87 ----~~ADiVii~ag~p~k~g---~~---r~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tN  138 (369)
                          .+.|+||..||......   .+   ....+..|+.....+.+.+    .+. ..+.++++|.
T Consensus        81 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS  145 (244)
T 2bd0_A           81 VERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQ-HSGHIFFITS  145 (244)
T ss_dssp             HHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred             HHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCEEEEEec
Confidence                27999999999753211   22   2344566655554444444    333 3566777754

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=96.93  E-value=0.0095  Score=55.14  Aligned_cols=115  Identities=17%  Similarity=0.280  Sum_probs=69.9

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHhhcccCCCeEEEEe-CCCChh---h------hcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFL-GQPQLE---N------ALT   87 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-~~g~~~dL~~~~~~~~v~~~~-~t~dl~---~------al~   87 (369)
                      +.+++.|+||+|++|..++..|+..|.  +|++.|.++ ......++...  ..++..+. .-+|.+   +      .+.
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~g  105 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGA--HVLAWGRTDGVKEVADEIADG--GGSAEAVVADLADLEGAANVAEELAATR  105 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSTHHHHHHHHHHTT--TCEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEcCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHhcC
Confidence            456899999999999999999999998  899999554 23333444332  23444332 123322   1      123


Q ss_pred             CCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHH----HHHHHHhhhCCCeEEEEecC
Q 017551           88 GMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVR----TLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        88 ~ADiVii~ag~p~k~g---~~---r~~~~~~N~~i~~----~i~~~i~~~~p~a~viv~tN  138 (369)
                      ..|++|..||......   .+   ....+..|+.-..    .+.+.+.+.. .+.||++|-
T Consensus       106 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS  165 (273)
T 3uf0_A          106 RVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG-SGRIVTIAS  165 (273)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             CCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcc
Confidence            7899999999754221   22   2344566655444    4444444443 566777653

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=96.92  E-value=0.0057  Score=55.80  Aligned_cols=111  Identities=20%  Similarity=0.223  Sum_probs=68.0

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHhhcccCCCeEEEEe-CCCC---hhhhcC------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFL-GQPQ---LENALT------   87 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~------   87 (369)
                      .++|.|+||+|++|..++..|+..+.  +|++.|.+...  ....++     ..++..+. .-+|   +.++++      
T Consensus         5 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (254)
T 1hdc_A            5 GKTVIITGGARGLGAEAARQAVAAGA--RVVLADVLDEEGAATAREL-----GDAARYQHLDVTIEEDWQRVVAYAREEF   77 (254)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHTT-----GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHh-----CCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999987  89999987621  122222     11222221 1122   223333      


Q ss_pred             -CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHH----HHHHHHHhhhCCCeEEEEecC
Q 017551           88 -GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIV----RTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        88 -~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tN  138 (369)
                       +.|++|..||.....   ..+   ....+..|+.-.    +.+.+.+.+.. .+.|+++|-
T Consensus        78 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS  138 (254)
T 1hdc_A           78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISS  138 (254)
T ss_dssp             SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECc
Confidence             899999999875421   122   234455665433    46666666543 466776653

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=96.92  E-value=0.0013  Score=61.01  Aligned_cols=113  Identities=13%  Similarity=0.105  Sum_probs=69.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-------   86 (369)
                      .+.+.|+||+|+||..++..|+..|.  +|++.|.+..  .....++.     .++..+. .-+|   ..+.+       
T Consensus        28 ~k~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~~~~~  100 (272)
T 4dyv_A           28 KKIAIVTGAGSGVGRAVAVALAGAGY--GVALAGRRLDALQETAAEIG-----DDALCVPTDVTDPDSVRALFTATVEKF  100 (272)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHT-----SCCEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhC-----CCeEEEEecCCCHHHHHHHHHHHHHHc
Confidence            35788899999999999999999997  8999999862  22223332     1222211 1122   22223       


Q ss_pred             CCCcEEEEcCCCCCC--C--CCCH---HHHHHHHHHH----HHHHHHHHhhhCC-CeEEEEecCC
Q 017551           87 TGMDLVIIPAGVPRK--P--GMTR---DDLFNINAGI----VRTLCEGIAKCCP-NATVNLISNP  139 (369)
Q Consensus        87 ~~ADiVii~ag~p~k--~--g~~r---~~~~~~N~~i----~~~i~~~i~~~~p-~a~viv~tNP  139 (369)
                      ...|++|..||....  +  ..+.   ...+..|+.-    .+.+.+.+.+..+ .+.|+++|--
T Consensus       101 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~  165 (272)
T 4dyv_A          101 GRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSI  165 (272)
T ss_dssp             SCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCS
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECch
Confidence            389999999997432  2  1222   3445666554    5555556655442 5777777643

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=96.91  E-value=0.0019  Score=53.34  Aligned_cols=70  Identities=11%  Similarity=0.102  Sum_probs=45.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCCh---hh-hcCCCcEEEEc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQL---EN-ALTGMDLVIIP   95 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl---~~-al~~ADiVii~   95 (369)
                      .++|.|+|+ |.+|+.++..|...+.  +++++|.++..  ...+.+..  ..+.. ...++.   .+ .++++|+||++
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~g~--~V~~id~~~~~--~~~~~~~~--~~~~~-gd~~~~~~l~~~~~~~~d~vi~~   77 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAAGK--KVLAVDKSKEK--IELLEDEG--FDAVI-ADPTDESFYRSLDLEGVSAVLIT   77 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTC--CEEEEESCHHH--HHHHHHTT--CEEEE-CCTTCHHHHHHSCCTTCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCC--eEEEEECCHHH--HHHHHHCC--CcEEE-CCCCCHHHHHhCCcccCCEEEEe
Confidence            358999999 9999999999999988  99999998622  11222211  11111 112332   22 25789999998


Q ss_pred             CC
Q 017551           96 AG   97 (369)
Q Consensus        96 ag   97 (369)
                      .+
T Consensus        78 ~~   79 (141)
T 3llv_A           78 GS   79 (141)
T ss_dssp             CS
T ss_pred             cC
Confidence            53

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=96.91  E-value=0.0098  Score=53.97  Aligned_cols=113  Identities=19%  Similarity=0.197  Sum_probs=68.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCCh---hhh-------c
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENA-------L   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl---~~a-------l   86 (369)
                      .+++.|+||+|++|..++..|+..+.  +|++.|.+.  ......++...  ..++..+. .-+|.   .++       +
T Consensus         7 ~k~~lVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   82 (247)
T 2jah_A            7 GKVALITGASSGIGEATARALAAEGA--AVAIAARRVEKLRALGDELTAA--GAKVHVLELDVADRQGVDAAVASTVEAL   82 (247)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999987  899999976  22233334321  12333322 12232   222       2


Q ss_pred             CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHH----HHHHHhhhCCCeEEEEecC
Q 017551           87 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRT----LCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i~~~----i~~~i~~~~p~a~viv~tN  138 (369)
                      .+.|++|..||.....   ..+.   ...+..|+.-...    +.+.+.+..  +.|+++|-
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS  142 (247)
T 2jah_A           83 GGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK--GTVVQMSS  142 (247)
T ss_dssp             SCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECC
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC--CEEEEEcc
Confidence            3799999999975321   1232   3345666554444    444444433  66777653

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=96.91  E-value=0.0015  Score=58.58  Aligned_cols=109  Identities=17%  Similarity=0.150  Sum_probs=65.2

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------C
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------T   87 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-------~   87 (369)
                      ++|.|+||+|++|+.++..|+..+.  +|++.|.+..  .....++.      .+..+. .-+|   +++++       .
T Consensus         6 k~vlVtGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (234)
T 2ehd_A            6 GAVLITGASRGIGEATARLLHAKGY--RVGLMARDEKRLQALAAELE------GALPLPGDVREEGDWARAVAAMEEAFG   77 (234)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHST------TCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhh------hceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4799999999999999999999987  8999998752  11222221      111111 1122   22222       3


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHH----HHHHHHhhhCCCeEEEEecC
Q 017551           88 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVR----TLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        88 ~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~----~i~~~i~~~~p~a~viv~tN  138 (369)
                      +.|+||..||.....   ..+   ....+..|+.-..    .+.+.+.+. ..+.++++|-
T Consensus        78 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~~~iv~isS  137 (234)
T 2ehd_A           78 ELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRR-GGGTIVNVGS  137 (234)
T ss_dssp             CCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-TCEEEEEECC
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCcEEEEECC
Confidence            789999999865321   112   2345566655444    444444443 3466777754

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=96.91  E-value=0.02  Score=52.43  Aligned_cols=116  Identities=12%  Similarity=0.072  Sum_probs=70.5

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCCh---hhh-------c
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENA-------L   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl---~~a-------l   86 (369)
                      .+.+.|+||+|++|..++..|+..+.  +|++.|.+.  ......++.......++..+. .-+|.   .+.       +
T Consensus         8 ~k~~lVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (265)
T 3lf2_A            8 EAVAVVTGGSSGIGLATVELLLEAGA--AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL   85 (265)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999997  899999986  233333443311112233322 12232   112       2


Q ss_pred             CCCcEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEec
Q 017551           87 TGMDLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLIS  137 (369)
Q Consensus        87 ~~ADiVii~ag~p~k-~--g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~t  137 (369)
                      ...|++|..||.... +  ..+   ....+..|+.-...+.+.+..+   ...+.|+++|
T Consensus        86 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~is  145 (265)
T 3lf2_A           86 GCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVN  145 (265)
T ss_dssp             CSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEE
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEEC
Confidence            377999999997432 1  223   2345667766555555555432   2356666665

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=96.91  E-value=0.0018  Score=58.55  Aligned_cols=111  Identities=14%  Similarity=0.132  Sum_probs=66.1

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------C
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------T   87 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-------~   87 (369)
                      +++.|+||+|++|..++..|+..|.  +|++.|.+..  .....++..     .+..+. .-+|   .++++       .
T Consensus         4 k~vlVTGas~GIG~a~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~~~g   76 (235)
T 3l6e_A            4 GHIIVTGAGSGLGRALTIGLVERGH--QVSMMGRRYQRLQQQELLLGN-----AVIGIVADLAHHEDVDVAFAAAVEWGG   76 (235)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHGG-----GEEEEECCTTSHHHHHHHHHHHHHHHC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhcC-----CceEEECCCCCHHHHHHHHHHHHHhcC
Confidence            5799999999999999999999997  8999999862  222223321     222221 1122   22222       3


Q ss_pred             CCcEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHhhhC--CCeEEEEecC
Q 017551           88 GMDLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEGIAKCC--PNATVNLISN  138 (369)
Q Consensus        88 ~ADiVii~ag~p~k-~--g~~---r~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tN  138 (369)
                      ..|++|..||.... +  ..+   ....+..|+.-...+.+.+...-  ..+.|+++|-
T Consensus        77 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS  135 (235)
T 3l6e_A           77 LPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLS  135 (235)
T ss_dssp             SCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred             CCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence            67999999997432 1  122   23456677666655555543321  2345666653

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=96.91  E-value=0.0017  Score=54.10  Aligned_cols=95  Identities=9%  Similarity=0.096  Sum_probs=59.0

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCC---hhh-hcCCCcEEEEc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ---LEN-ALTGMDLVIIP   95 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~d---l~~-al~~ADiVii~   95 (369)
                      ..+|+|+|+ |.+|+.++..|...+.  +++++|.++..  ...+....  ..+. ....++   +++ .+.+||+||++
T Consensus         7 ~~~viIiG~-G~~G~~la~~L~~~g~--~v~vid~~~~~--~~~~~~~g--~~~i-~gd~~~~~~l~~a~i~~ad~vi~~   78 (140)
T 3fwz_A            7 CNHALLVGY-GRVGSLLGEKLLASDI--PLVVIETSRTR--VDELRERG--VRAV-LGNAANEEIMQLAHLECAKWLILT   78 (140)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTC--CEEEEESCHHH--HHHHHHTT--CEEE-ESCTTSHHHHHHTTGGGCSEEEEC
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCCC--CEEEEECCHHH--HHHHHHcC--CCEE-ECCCCCHHHHHhcCcccCCEEEEE
Confidence            358999999 9999999999999888  99999998622  12222211  1221 111222   222 35799999998


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           96 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        96 ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      .+..           ..|..    ++..+++..|+..++.-.
T Consensus        79 ~~~~-----------~~n~~----~~~~a~~~~~~~~iiar~  105 (140)
T 3fwz_A           79 IPNG-----------YEAGE----IVASARAKNPDIEIIARA  105 (140)
T ss_dssp             CSCH-----------HHHHH----HHHHHHHHCSSSEEEEEE
T ss_pred             CCCh-----------HHHHH----HHHHHHHHCCCCeEEEEE
Confidence            4221           33433    334566677887665544

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=96.90  E-value=0.0012  Score=60.36  Aligned_cols=114  Identities=17%  Similarity=0.269  Sum_probs=68.5

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC-----
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT-----   87 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~-----   87 (369)
                      +.+++.|+||+|++|..++..|+..+.  +|+++|.+..  .....++.     ..+..+. .-+|   .+++++     
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGA--KVVIVDRDKAGAERVAGEIG-----DAALAVAADISKEADVDAAVEAALSK   80 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHC-----TTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHhC-----CceEEEEecCCCHHHHHHHHHHHHHh
Confidence            346899999999999999999999997  8999999862  22222231     1222221 1122   222333     


Q ss_pred             --CCcEEEEcCCCCCCCC----CCH---HHHHHHHHH----HHHHHHHHHhhhC---CCeEEEEecCC
Q 017551           88 --GMDLVIIPAGVPRKPG----MTR---DDLFNINAG----IVRTLCEGIAKCC---PNATVNLISNP  139 (369)
Q Consensus        88 --~ADiVii~ag~p~k~g----~~r---~~~~~~N~~----i~~~i~~~i~~~~---p~a~viv~tNP  139 (369)
                        ..|++|..||....++    .+.   ...+..|+.    +.+.+.+.+.+..   ..+.|+++|-.
T Consensus        81 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~  148 (261)
T 3n74_A           81 FGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVAST  148 (261)
T ss_dssp             HSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCT
T ss_pred             cCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCch
Confidence              7899999999754222    122   234455544    4555555555442   25567776543

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=96.90  E-value=0.0071  Score=56.32  Aligned_cols=118  Identities=12%  Similarity=0.106  Sum_probs=71.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhccc---CCCeEEEEeC-CCC---hhhhcC---
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD---TGAVVRGFLG-QPQ---LENALT---   87 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~---~~~~v~~~~~-t~d---l~~al~---   87 (369)
                      .++|.|+||+|++|+.++..|+..+.  +|+++|.+.  ......++....   ...++..+.. -+|   +.++++   
T Consensus        18 ~k~vlVTGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   95 (303)
T 1yxm_A           18 GQVAIVTGGATGIGKAIVKELLELGS--NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL   95 (303)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHH
Confidence            46899999999999999999999987  899999876  222333443210   1234443321 122   223333   


Q ss_pred             ----CCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCC
Q 017551           88 ----GMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISNP  139 (369)
Q Consensus        88 ----~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP  139 (369)
                          ..|+||..||.....   ..+.   ...+..|+.....+.+.+...   ...+.+++++-.
T Consensus        96 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~  160 (303)
T 1yxm_A           96 DTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVP  160 (303)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCC
T ss_pred             HHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEee
Confidence                589999999864321   1222   344667776666666654432   124667766644

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=96.89  E-value=0.011  Score=53.97  Aligned_cols=114  Identities=13%  Similarity=0.130  Sum_probs=70.1

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC-----
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT-----   87 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~-----   87 (369)
                      +.+++.|+||+|++|..++..|+..|.  +|++.|.+.  ......++...  ..++..+. .-+|   ..++++     
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGF--TVFAGRRNGEKLAPLVAEIEAA--GGRIVARSLDARNEDEVTAFLNAADAH   81 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTC--EEEEEESSGGGGHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECcCCCHHHHHHHHHHHHhh
Confidence            345899999999999999999999998  899999987  23333444332  23444332 1223   222333     


Q ss_pred             -CCcEEEEcCCCCCCC---CCCH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEec
Q 017551           88 -GMDLVIIPAGVPRKP---GMTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        88 -~ADiVii~ag~p~k~---g~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~t  137 (369)
                       ..|++|..||.....   ..+.   ...+..|+.    +.+.+.+.+.+.. .+.|+++|
T Consensus        82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~is  141 (252)
T 3h7a_A           82 APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHG-QGKIFFTG  141 (252)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEE
T ss_pred             CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEC
Confidence             679999999975421   1222   334555644    4445555555443 46666664

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=96.89  E-value=0.0019  Score=57.72  Aligned_cols=69  Identities=19%  Similarity=0.156  Sum_probs=46.0

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCC---hhhh-cCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ---LENA-LTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~d---l~~a-l~~ADiVii~a   96 (369)
                      |||+|+|+ |.+|+.++..|...+.  +++++|.+....  .++.... ...+. ....++   +.++ +++||+||++.
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~--~v~vid~~~~~~--~~l~~~~-~~~~i-~gd~~~~~~l~~a~i~~ad~vi~~~   73 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKY--GVVIINKDRELC--EEFAKKL-KATII-HGDGSHKEILRDAEVSKNDVVVILT   73 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTC--CEEEEESCHHHH--HHHHHHS-SSEEE-ESCTTSHHHHHHHTCCTTCEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC--eEEEEECCHHHH--HHHHHHc-CCeEE-EcCCCCHHHHHhcCcccCCEEEEec
Confidence            68999999 9999999999999887  999999986221  2222111 11111 111222   3333 78999999985

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=96.88  E-value=0.0043  Score=57.34  Aligned_cols=114  Identities=16%  Similarity=0.195  Sum_probs=69.4

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCCh---hhh-------c
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENA-------L   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl---~~a-------l   86 (369)
                      .+++.|+||+|++|..++..|+..|.  +|++.|.+.  ......++...  ...+..+. .-+|.   +++       +
T Consensus         4 ~k~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   79 (264)
T 3tfo_A            4 DKVILITGASGGIGEGIARELGVAGA--KILLGARRQARIEAIATEIRDA--GGTALAQVLDVTDRHSVAAFAQAAVDTW   79 (264)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35899999999999999999999997  899999986  23333444332  22333322 12232   222       2


Q ss_pred             CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHH----HHHHHHHhhhCCCeEEEEecC
Q 017551           87 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIV----RTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tN  138 (369)
                      ...|++|..||.....   ..+.   ...+..|+.-.    +.+.+.+.+. ..+.||++|-
T Consensus        80 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~IV~isS  140 (264)
T 3tfo_A           80 GRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQ-RSGQIINIGS  140 (264)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEEcC
Confidence            3789999999975321   1222   33455665444    4445555444 3566777653

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.88  E-value=0.0043  Score=56.64  Aligned_cols=111  Identities=17%  Similarity=0.207  Sum_probs=66.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchh-HHHHhhcccCCCeEEEEeCCCC---hhhhc-------CC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG-VTADISHMDTGAVVRGFLGQPQ---LENAL-------TG   88 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g-~~~dL~~~~~~~~v~~~~~t~d---l~~al-------~~   88 (369)
                      .++|.|+||+|++|..++..|+..+.  +|++.|.+.... ...++.    ...+..  .-+|   +++++       ..
T Consensus         6 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~----~~~~~~--D~~~~~~~~~~~~~~~~~~g~   77 (256)
T 2d1y_A            6 GKGVLVTGGARGIGRAIAQAFAREGA--LVALCDLRPEGKEVAEAIG----GAFFQV--DLEDERERVRFVEEAAYALGR   77 (256)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSTTHHHHHHHHT----CEEEEC--CTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHhh----CCEEEe--eCCCHHHHHHHHHHHHHHcCC
Confidence            45899999999999999999999987  899999876321 112221    101111  1122   22222       37


Q ss_pred             CcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 017551           89 MDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  138 (369)
Q Consensus        89 ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN  138 (369)
                      .|++|..||.....   ..+   ....+..|+.-...+.+.+..+   ...+.|+++|-
T Consensus        78 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS  136 (256)
T 2d1y_A           78 VDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVAS  136 (256)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcc
Confidence            89999999875321   122   2345667766555555544332   23466777653

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=96.88  E-value=0.0084  Score=55.75  Aligned_cols=117  Identities=14%  Similarity=0.165  Sum_probs=69.9

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCCh---hhhc------
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENAL------   86 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl---~~al------   86 (369)
                      +.+.+.|+||+|++|..++..|+..|.  +|++.|.+.  ......++.... ...+..+. .-+|.   ++++      
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~  108 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGY--SVVITGRRPDVLDAAAGEIGGRT-GNIVRAVVCDVGDPDQVAALFAAVRAE  108 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC-CCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            346899999999999999999999997  899999986  223333343221 11122221 12232   2222      


Q ss_pred             -CCCcEEEEcCCCCCCCC----CCH---HHHHHHHHHH----HHHHHHHHhhhC-CCeEEEEecC
Q 017551           87 -TGMDLVIIPAGVPRKPG----MTR---DDLFNINAGI----VRTLCEGIAKCC-PNATVNLISN  138 (369)
Q Consensus        87 -~~ADiVii~ag~p~k~g----~~r---~~~~~~N~~i----~~~i~~~i~~~~-p~a~viv~tN  138 (369)
                       ...|++|..||.....+    .+.   ...+..|+.-    .+.+.+.+.+.. ..+.|+++|-
T Consensus       109 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS  173 (281)
T 4dry_A          109 FARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGS  173 (281)
T ss_dssp             HSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECC
T ss_pred             cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECC
Confidence             36799999999743221    222   3345566544    555556665554 2577777753

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=96.87  E-value=0.0073  Score=56.59  Aligned_cols=115  Identities=18%  Similarity=0.228  Sum_probs=69.4

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--------------chhHHHHhhcccCCCeEEEEe-CCCCh--
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--------------TPGVTADISHMDTGAVVRGFL-GQPQL--   82 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--------------~~g~~~dL~~~~~~~~v~~~~-~t~dl--   82 (369)
                      .+.+.|+||+|+||..++..|+..|.  .|+++|.+.              ......++...  ..++..+. .-+|.  
T Consensus        28 gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~  103 (299)
T 3t7c_A           28 GKVAFITGAARGQGRSHAITLAREGA--DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL--GRRIIASQVDVRDFDA  103 (299)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEecccccccccccccCHHHHHHHHHHHHhc--CCceEEEECCCCCHHH
Confidence            46899999999999999999999998  999999872              11122223221  23333332 12232  


Q ss_pred             -hhhc-------CCCcEEEEcCCCCCCC----CCCH---HHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 017551           83 -ENAL-------TGMDLVIIPAGVPRKP----GMTR---DDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        83 -~~al-------~~ADiVii~ag~p~k~----g~~r---~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN  138 (369)
                       ++++       ...|++|..||.....    ..+.   ...+..|+.-    .+.+.+.+.+....+.|+++|-
T Consensus       104 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS  178 (299)
T 3t7c_A          104 MQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSS  178 (299)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECC
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECC
Confidence             2222       3789999999864322    1232   3455666544    4444445554445677777764

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=96.87  E-value=0.0039  Score=56.09  Aligned_cols=112  Identities=20%  Similarity=0.196  Sum_probs=66.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHhhcccCCCeEEEEeCCCC---hhhhcC---CCcE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQPQ---LENALT---GMDL   91 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~~~~~~v~~~~~t~d---l~~al~---~ADi   91 (369)
                      .++|.|+||+|++|+.++..|+..+.  +|+++|.+...  ....++.    ...+.. ..-+|   +.++++   ..|+
T Consensus         7 ~k~vlITGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~----~~~~~~-~D~~~~~~~~~~~~~~~~id~   79 (244)
T 3d3w_A            7 GRRVLVTGAGKGIGRGTVQALHATGA--RVVAVSRTQADLDSLVRECP----GIEPVC-VDLGDWEATERALGSVGPVDL   79 (244)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHST----TCEEEE-CCTTCHHHHHHHHTTCCCCCE
T ss_pred             CcEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHcC----CCCEEE-EeCCCHHHHHHHHHHcCCCCE
Confidence            45899999999999999999999987  89999987521  1111111    111111 11122   333343   5799


Q ss_pred             EEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHh----hhCCCeEEEEecC
Q 017551           92 VIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIA----KCCPNATVNLISN  138 (369)
Q Consensus        92 Vii~ag~p~k~g---~~---r~~~~~~N~~i~~~i~~~i~----~~~p~a~viv~tN  138 (369)
                      ||..||......   .+   ....+..|+.....+.+.+.    +....+.++++|.
T Consensus        80 vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS  136 (244)
T 3d3w_A           80 LVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSS  136 (244)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred             EEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCc
Confidence            999998754211   12   23456667665444444443    3332566777764

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=96.87  E-value=0.0035  Score=59.29  Aligned_cols=64  Identities=19%  Similarity=0.268  Sum_probs=44.2

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      .||++||- |.+|++++..|+..++  +|+.||++..+  +.+|...    ..+.   .+++.++++++|+||+.-
T Consensus         6 ~kIgfIGL-G~MG~~mA~~L~~~G~--~V~v~dr~~~~--~~~l~~~----G~~~---~~s~~e~~~~~dvvi~~l   69 (297)
T 4gbj_A            6 EKIAFLGL-GNLGTPIAEILLEAGY--ELVVWNRTASK--AEPLTKL----GATV---VENAIDAITPGGIVFSVL   69 (297)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTC--EEEEC---------CTTTTT----TCEE---CSSGGGGCCTTCEEEECC
T ss_pred             CcEEEEec-HHHHHHHHHHHHHCCC--eEEEEeCCHHH--HHHHHHc----CCeE---eCCHHHHHhcCCceeeec
Confidence            38999999 9999999999999998  99999997622  1222221    1222   245678999999999973

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=96.87  E-value=0.0093  Score=54.35  Aligned_cols=116  Identities=16%  Similarity=0.125  Sum_probs=68.4

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc------
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL------   86 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al------   86 (369)
                      +.++|.|+||+|++|..++..|+..+.  +|+++|.+..  .....++...  ..++..+. .-+|   +.+++      
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   88 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGA--VIHTCARNEYELNECLSKWQKK--GFQVTGSVCDASLRPEREKLMQTVSSM   88 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc--CCeeEEEECCCCCHHHHHHHHHHHHHH
Confidence            346899999999999999999999987  8999998762  2222333321  12333322 1122   22233      


Q ss_pred             --CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHH----hhhCCCeEEEEecCC
Q 017551           87 --TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGI----AKCCPNATVNLISNP  139 (369)
Q Consensus        87 --~~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tNP  139 (369)
                        .+.|+||..||.....   ..+   ....+..|+.-...+.+.+    .+.. .+.++++|..
T Consensus        89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~  152 (266)
T 1xq1_A           89 FGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSI  152 (266)
T ss_dssp             HTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC--
T ss_pred             hCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEccc
Confidence              5789999999864321   122   2345667776555555554    4443 4556666543

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=96.87  E-value=0.015  Score=52.46  Aligned_cols=112  Identities=16%  Similarity=0.235  Sum_probs=67.6

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeE-EEEe-CCCC---hhhhc-----
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVV-RGFL-GQPQ---LENAL-----   86 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v-~~~~-~t~d---l~~al-----   86 (369)
                      +.++|.|+||+|++|..++..|+..+.  +|+++|.+..  .....++.     .++ ..+. .-+|   +++++     
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGA--RLILIDREAAALDRAAQELG-----AAVAARIVADVTDAEAMTAAAAEAEA   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHG-----GGEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhc-----ccceeEEEEecCCHHHHHHHHHHHHh
Confidence            345899999999999999999999987  8999998762  22222231     122 2111 1122   22222     


Q ss_pred             -CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 017551           87 -TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        87 -~~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN  138 (369)
                       .+.|+||..||.....   ..+   ....+..|+.-    .+.+.+.+.+.. .+.++++|.
T Consensus        83 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~isS  144 (254)
T 2wsb_A           83 VAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARG-AGAIVNLGS  144 (254)
T ss_dssp             HSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             hCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEec
Confidence             5789999999875422   122   23455666655    444445554443 456666654

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=96.86  E-value=0.0022  Score=58.80  Aligned_cols=111  Identities=19%  Similarity=0.176  Sum_probs=66.3

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEE-eCCCChhhh-------cCCCcE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQLENA-------LTGMDL   91 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~-~~t~dl~~a-------l~~ADi   91 (369)
                      .++|.|+||+|++|..++..|+..+.  +|++.|.+.....     ..   ..+... +...+.+++       +...|+
T Consensus        21 ~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~-----~~---~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~   90 (253)
T 2nm0_A           21 SRSVLVTGGNRGIGLAIARAFADAGD--KVAITYRSGEPPE-----GF---LAVKCDITDTEQVEQAYKEIEETHGPVEV   90 (253)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSSCCCT-----TS---EEEECCTTSHHHHHHHHHHHHHHTCSCSE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCChHhhc-----cc---eEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            46899999999999999999999987  8999998752110     00   001100 000112222       345799


Q ss_pred             EEEcCCCCCCC------CCCHHHHHHHHHHHHHHHHH----HHhhhCCCeEEEEecCCCC
Q 017551           92 VIIPAGVPRKP------GMTRDDLFNINAGIVRTLCE----GIAKCCPNATVNLISNPVN  141 (369)
Q Consensus        92 Vii~ag~p~k~------g~~r~~~~~~N~~i~~~i~~----~i~~~~p~a~viv~tNPv~  141 (369)
                      +|..||.....      .......+..|+.-...+.+    .+.+. ..+.|+++|--..
T Consensus        91 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~  149 (253)
T 2nm0_A           91 LIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRA-KKGRVVLISSVVG  149 (253)
T ss_dssp             EEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEEEEECCCCC
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEECchhh
Confidence            99999875321      12344566677665544444    44433 3566777765443

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=96.86  E-value=0.0049  Score=56.43  Aligned_cols=112  Identities=17%  Similarity=0.230  Sum_probs=71.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCChh----------hhc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQLE----------NAL   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~dl~----------~al   86 (369)
                      .+++.|+||+|++|..++..|+..|.  +|++.|.+..  .....++.     .++..+. .-+|.+          +.+
T Consensus         8 gk~~lVTGas~gIG~a~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (255)
T 4eso_A            8 GKKAIVIGGTHGMGLATVRRLVEGGA--EVLLTGRNESNIARIREEFG-----PRVHALRSDIADLNEIAVLGAAAGQTL   80 (255)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHG-----GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhC-----CcceEEEccCCCHHHHHHHHHHHHHHh
Confidence            45899999999999999999999998  9999999862  22222221     2222221 122321          223


Q ss_pred             CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 017551           87 TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  138 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~g---~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN  138 (369)
                      ...|++|..||......   .+   ....+..|+.-...+.+.+..+- ..+.|+++|-
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS  139 (255)
T 4eso_A           81 GAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSS  139 (255)
T ss_dssp             SSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECC
Confidence            47899999999754221   22   24456778777777777766543 3466777764

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=96.86  E-value=0.024  Score=53.09  Aligned_cols=115  Identities=19%  Similarity=0.248  Sum_probs=70.1

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCCh---h-------hhc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---E-------NAL   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl---~-------~al   86 (369)
                      .++|.|+||+|+||..++..|+..|.  +|++.|.+.  ......++.... ..++..+. .-+|.   +       +.+
T Consensus        41 ~k~vlVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  117 (293)
T 3rih_A           41 ARSVLVTGGTKGIGRGIATVFARAGA--NVAVAARSPRELSSVTAELGELG-AGNVIGVRLDVSDPGSCADAARTVVDAF  117 (293)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSGGGGHHHHHHHTTSS-SSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhhC-CCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999998  999999987  233344454322 13444332 12332   1       223


Q ss_pred             CCCcEEEEcCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHH----HhhhCCCeEEEEecC
Q 017551           87 TGMDLVIIPAGVPRK-P--GMTR---DDLFNINAGIVRTLCEG----IAKCCPNATVNLISN  138 (369)
Q Consensus        87 ~~ADiVii~ag~p~k-~--g~~r---~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tN  138 (369)
                      ...|++|..||.... +  ..+.   ...+..|+.-...+.+.    +.+.. .+.||++|-
T Consensus       118 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iV~isS  178 (293)
T 3rih_A          118 GALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASG-RGRVILTSS  178 (293)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHS-SCEEEEECC
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEeC
Confidence            467999999986432 2  2232   34456666554444444    44544 355666653

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=96.85  E-value=0.00051  Score=62.79  Aligned_cols=107  Identities=14%  Similarity=0.108  Sum_probs=66.9

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEE-EeCCCChhhh-------cCCCcEE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENA-------LTGMDLV   92 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~-~~~t~dl~~a-------l~~ADiV   92 (369)
                      ++|.|+||+|++|..++..|+..+.  +|+++|.+.....     .    ..+.. .+...+..++       +...|+|
T Consensus        23 k~vlITGas~gIG~~la~~l~~~G~--~V~~~~r~~~~~~-----~----~~~~~d~~d~~~v~~~~~~~~~~~g~iD~l   91 (251)
T 3orf_A           23 KNILVLGGSGALGAEVVKFFKSKSW--NTISIDFRENPNA-----D----HSFTIKDSGEEEIKSVIEKINSKSIKVDTF   91 (251)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCCTTS-----S----EEEECSCSSHHHHHHHHHHHHTTTCCEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCccccc-----c----cceEEEeCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5899999999999999999999997  8999999862111     0    01111 0111122222       3356999


Q ss_pred             EEcCCCCCCC----CCC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 017551           93 IIPAGVPRKP----GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  138 (369)
Q Consensus        93 ii~ag~p~k~----g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN  138 (369)
                      |..||.....    ..+   ....+..|+.-...+.+.+..+. +.+.|+++|-
T Consensus        92 i~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS  145 (251)
T 3orf_A           92 VCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGA  145 (251)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             EECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEec
Confidence            9999864321    111   23456677777777776666543 3466777753

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=96.85  E-value=0.0045  Score=57.41  Aligned_cols=115  Identities=21%  Similarity=0.176  Sum_probs=72.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc---hhHHHHhhcccCCCeEEEEe-CCCCh---hh-------h
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL-GQPQL---EN-------A   85 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~---~g~~~dL~~~~~~~~v~~~~-~t~dl---~~-------a   85 (369)
                      .+++.|+||+|++|..++..|+..|.  +|++.|.+..   .....++...  ..++..+. .-+|.   .+       .
T Consensus        29 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~  104 (283)
T 1g0o_A           29 GKVALVTGAGRGIGREMAMELGRRGC--KVIVNYANSTESAEEVVAAIKKN--GSDAACVKANVGVVEDIVRMFEEAVKI  104 (283)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCchHHHHHHHHHHHHh--CCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999987  8999998762   1222333321  12333221 11222   12       2


Q ss_pred             cCCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 017551           86 LTGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  138 (369)
Q Consensus        86 l~~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN  138 (369)
                      +...|++|..||.....   ..+   ....+..|+.-...+.+.+..+- ..+.|+++|.
T Consensus       105 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS  164 (283)
T 1g0o_A          105 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGS  164 (283)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECC
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEec
Confidence            34789999999975321   122   24456788777777777776652 3466777653

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=96.85  E-value=0.0062  Score=56.50  Aligned_cols=78  Identities=15%  Similarity=0.141  Sum_probs=52.8

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCCh----hh-------
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQL----EN-------   84 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~dl----~~-------   84 (369)
                      +.+.|.|+||+|+||..++..|+..|.  +|++.|.+..  .....++.... ..++..+. .-+|.    .+       
T Consensus        11 ~~k~vlITGas~GIG~~~a~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~v~~~~~~~~~   87 (311)
T 3o26_A           11 KRRCAVVTGGNKGIGFEICKQLSSNGI--MVVLTCRDVTKGHEAVEKLKNSN-HENVVFHQLDVTDPIATMSSLADFIKT   87 (311)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTT-CCSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCcEEEEecCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC-CCceEEEEccCCCcHHHHHHHHHHHHH
Confidence            456899999999999999999999987  9999999872  33344454332 23444332 12232    11       


Q ss_pred             hcCCCcEEEEcCCCC
Q 017551           85 ALTGMDLVIIPAGVP   99 (369)
Q Consensus        85 al~~ADiVii~ag~p   99 (369)
                      .+...|++|..||+.
T Consensus        88 ~~g~iD~lv~nAg~~  102 (311)
T 3o26_A           88 HFGKLDILVNNAGVA  102 (311)
T ss_dssp             HHSSCCEEEECCCCC
T ss_pred             hCCCCCEEEECCccc
Confidence            234899999999875

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=96.85  E-value=0.0017  Score=59.98  Aligned_cols=113  Identities=23%  Similarity=0.364  Sum_probs=68.8

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCCh---hhh-------
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQL---ENA-------   85 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~dl---~~a-------   85 (369)
                      +.+++.|+||+|++|..++..|+..|.  .|++.|.+..  .....++.     .++..+. .-+|.   +++       
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~~~~   98 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGA--IVGLHGTREDKLKEIAADLG-----KDVFVFSANLSDRKSIKQLAEVAERE   98 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHC-----SSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhC-----CceEEEEeecCCHHHHHHHHHHHHHH
Confidence            346899999999999999999999997  8999998762  22222221     2233221 12232   222       


Q ss_pred             cCCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecCC
Q 017551           86 LTGMDLVIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISNP  139 (369)
Q Consensus        86 l~~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNP  139 (369)
                      +...|++|..||.....   ..+   ....+..|+.-    .+.+.+.+.+. ..+.|+++|--
T Consensus        99 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~Iv~isS~  161 (266)
T 3grp_A           99 MEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRR-RYGRIINITSI  161 (266)
T ss_dssp             HTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCC
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcEEEEECCH
Confidence            23789999999975421   111   23445667655    55555555544 34667776643

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.85  E-value=0.0021  Score=58.39  Aligned_cols=112  Identities=20%  Similarity=0.225  Sum_probs=67.0

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------CC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------TG   88 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-------~~   88 (369)
                      .+++.|+||+|++|..++..|+..+.  +|++.|.+.....  ++.... .  +..+. .-+|   .++++       ..
T Consensus         5 ~k~vlVTGas~giG~~ia~~l~~~G~--~V~~~~r~~~~~~--~~~~~~-~--~~~~~~D~~~~~~~~~~~~~~~~~~g~   77 (245)
T 1uls_A            5 DKAVLITGAAHGIGRATLELFAKEGA--RLVACDIEEGPLR--EAAEAV-G--AHPVVMDVADPASVERGFAEALAHLGR   77 (245)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHH--HHHHTT-T--CEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHH--HHHHHc-C--CEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            45899999999999999999999987  9999998752111  111110 1  11111 1122   22233       35


Q ss_pred             CcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 017551           89 MDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  138 (369)
Q Consensus        89 ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN  138 (369)
                      .|++|..||.....   ..+   ....+..|+.-...+.+.+..+   ...+.|+++|.
T Consensus        78 id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS  136 (245)
T 1uls_A           78 LDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTAS  136 (245)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECC
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcc
Confidence            89999999975421   122   2345667766655555554433   23466777764

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=96.83  E-value=0.003  Score=58.52  Aligned_cols=115  Identities=10%  Similarity=0.189  Sum_probs=69.8

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC-----
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT-----   87 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~-----   87 (369)
                      +.+++.|+||+|++|..++..|+..|.  +|++.|.+.  ......++...  ..++..+. .-+|   ..++++     
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~  100 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGA--RILINGTDPSRVAQTVQEFRNV--GHDAEAVAFDVTSESEIIEAFARLDEQ  100 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEECCSCHHHHHHHHHHHHHT--TCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            346899999999999999999999997  899999876  23333444332  12333321 1122   222332     


Q ss_pred             --CCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHH----HHHHHHhhhCCCeEEEEecC
Q 017551           88 --GMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVR----TLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        88 --~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i~~----~i~~~i~~~~p~a~viv~tN  138 (369)
                        ..|++|..||.....   ..+.   ...+..|+.-..    .+.+.+.+.. .+.|+++|-
T Consensus       101 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iV~isS  162 (271)
T 4ibo_A          101 GIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRG-YGKIVNIGS  162 (271)
T ss_dssp             TCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             CCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcc
Confidence              789999999975322   1232   334566655444    4455554443 466777653

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=96.82  E-value=0.011  Score=54.35  Aligned_cols=115  Identities=15%  Similarity=0.134  Sum_probs=68.8

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCCh---hhhc------
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQL---ENAL------   86 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~dl---~~al------   86 (369)
                      +.+++.|+||+|++|..++..|+..|.  +|++.|.+..  .....++...  ..++..+. .-+|.   .+++      
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   95 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGA--RVYTCSRNEKELDECLEIWREK--GLNVEGSVCDLLSRTERDKLMQTVAHV   95 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            346899999999999999999999987  8999999862  2222333321  12333322 11222   2222      


Q ss_pred             --CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHH----HHHhhhCCCeEEEEecC
Q 017551           87 --TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLC----EGIAKCCPNATVNLISN  138 (369)
Q Consensus        87 --~~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~~i~----~~i~~~~p~a~viv~tN  138 (369)
                        ...|++|..||.....   ..+   ....+..|+.-...+.    +.+.+. ..+.|+++|.
T Consensus        96 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~isS  158 (273)
T 1ae1_A           96 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKAS-QNGNVIFLSS  158 (273)
T ss_dssp             TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TSEEEEEECC
T ss_pred             cCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcC
Confidence              5789999999975321   122   2334456655444444    444443 3466777764

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.82  E-value=0.0017  Score=59.81  Aligned_cols=116  Identities=16%  Similarity=0.168  Sum_probs=72.0

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFL-GQPQ---LENAL-------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-------   86 (369)
                      .+++.|+||+|++|..++..|+..+.  +|++.|.+...  ....++.     .++..+. .-+|   .++++       
T Consensus         6 ~k~vlITGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (263)
T 2a4k_A            6 GKTILVTGAASGIGRAALDLFAREGA--SLVAVDREERLLAEAVAALE-----AEAIAVVADVSDPKAVEAVFAEALEEF   78 (263)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHTCC-----SSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhc-----CceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999987  99999987621  1112221     2233221 1122   22233       


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCC
Q 017551           87 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNS  142 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~  142 (369)
                      ...|++|..||.....   ..+   ....+..|+.-...+.+.+..+. ..+.|+++|.-...
T Consensus        79 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~  141 (263)
T 2a4k_A           79 GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL  141 (263)
T ss_dssp             SCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc
Confidence            3569999999875321   122   23456778777766766666553 14667777655443

>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6

Probab=96.82  E-value=0.0013  Score=60.48  Aligned_cols=64  Identities=16%  Similarity=0.204  Sum_probs=45.4

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      |||+|||+ |.+|+.++..|...++  +|+++|.........++....  ..       +++.+++++||+||++.
T Consensus         1 M~I~iIG~-G~mG~~la~~l~~~g~--~V~~~~~~~~~~~~~~~~~~g--~~-------~~~~~~~~~aDvvi~~v   64 (264)
T 1i36_A            1 LRVGFIGF-GEVAQTLASRLRSRGV--EVVTSLEGRSPSTIERARTVG--VT-------ETSEEDVYSCPVVISAV   64 (264)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTC--EEEECCTTCCHHHHHHHHHHT--CE-------ECCHHHHHTSSEEEECS
T ss_pred             CeEEEEec-hHHHHHHHHHHHHCCC--eEEEeCCccCHHHHHHHHHCC--Cc-------CCHHHHHhcCCEEEEEC
Confidence            68999999 9999999999998887  899988732122222232211  11       23467789999999985

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=96.82  E-value=0.0043  Score=57.13  Aligned_cols=115  Identities=14%  Similarity=0.219  Sum_probs=69.1

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC-----
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT-----   87 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~-----   87 (369)
                      +.++|.|+||+|++|..++..|+..+.  +|+++|.+..  ......+...  ..++..+. .-+|   +.++++     
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~  108 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGA--DVAIWYNSHPADEKAEHLQKTY--GVHSKAYKCNISDPKSVEETISQQEKD  108 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTC--EEEEEESSSCCHHHHHHHHHHH--CSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc--CCcceEEEeecCCHHHHHHHHHHHHHH
Confidence            346899999999999999999999887  8999998762  2222222211  12333322 1122   223333     


Q ss_pred             --CCcEEEEcCCCCCC--C---CCC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 017551           88 --GMDLVIIPAGVPRK--P---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        88 --~ADiVii~ag~p~k--~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN  138 (369)
                        ..|+||..||....  +   ..+   ....+..|+.-    .+.+.+.+.+.. .+.++++|-
T Consensus       109 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~isS  172 (279)
T 3ctm_A          109 FGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG-KGSLIITSS  172 (279)
T ss_dssp             HSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECC
T ss_pred             hCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEECc
Confidence              48999999986532  1   111   12345566555    566777776654 355666654

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=96.81  E-value=0.025  Score=51.37  Aligned_cols=116  Identities=18%  Similarity=0.203  Sum_probs=68.0

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CC--CCh---hhh-----
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQ--PQL---ENA-----   85 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t--~dl---~~a-----   85 (369)
                      +.+.+.|+||+|++|..++..|+..+.  +|++.|.+.  ......++..... ..+..+. .-  +|.   ++.     
T Consensus        11 ~~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (252)
T 3f1l_A           11 NDRIILVTGASDGIGREAAMTYARYGA--TVILLGRNEEKLRQVASHINEETG-RQPQWFILDLLTCTSENCQQLAQRIA   87 (252)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHHS-CCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhcC-CCceEEEEecccCCHHHHHHHHHHHH
Confidence            346899999999999999999999998  899999986  2223333332211 1222211 11  221   122     


Q ss_pred             --cCCCcEEEEcCCCCC--CC--CCCH---HHHHHHHHHHHHHHHHH----HhhhCCCeEEEEecC
Q 017551           86 --LTGMDLVIIPAGVPR--KP--GMTR---DDLFNINAGIVRTLCEG----IAKCCPNATVNLISN  138 (369)
Q Consensus        86 --l~~ADiVii~ag~p~--k~--g~~r---~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tN  138 (369)
                        +...|++|..||...  .+  ..+.   ...+..|+.-...+.+.    +.+. ..+.|+++|-
T Consensus        88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~isS  152 (252)
T 3f1l_A           88 VNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKS-DAGSLVFTSS  152 (252)
T ss_dssp             HHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTS-SSCEEEEECC
T ss_pred             HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHC-CCCEEEEECC
Confidence              237899999999732  22  2232   34456665544444444    4433 3456666653

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=96.81  E-value=0.0074  Score=56.06  Aligned_cols=116  Identities=16%  Similarity=0.239  Sum_probs=68.1

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHhhcccCCCeEEEEe-CCC---ChhhhcC-----
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQP---QLENALT-----   87 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~---~~g~~~dL~~~~~~~~v~~~~-~t~---dl~~al~-----   87 (369)
                      .+.+.|+||+|+||..++..|+..|.  +|++.|.+.   ......++...  ..++..+. .-+   +.+++++     
T Consensus        29 ~k~~lVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~  104 (280)
T 4da9_A           29 RPVAIVTGGRRGIGLGIARALAASGF--DIAITGIGDAEGVAPVIAELSGL--GARVIFLRADLADLSSHQATVDAVVAE  104 (280)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCCHHHHHHHHHHHHHT--TCCEEEEECCTTSGGGHHHHHHHHHHH
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCC--eEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999998  999999754   22233334332  23333332 112   2333333     


Q ss_pred             --CCcEEEEcCCCC---CCC--CCCH---HHHHHHHHH----HHHHHHHHHhhhCC--CeEEEEecCC
Q 017551           88 --GMDLVIIPAGVP---RKP--GMTR---DDLFNINAG----IVRTLCEGIAKCCP--NATVNLISNP  139 (369)
Q Consensus        88 --~ADiVii~ag~p---~k~--g~~r---~~~~~~N~~----i~~~i~~~i~~~~p--~a~viv~tNP  139 (369)
                        ..|++|..||..   ..+  ..+.   ...+..|+.    +.+.+.+.+.+...  .+.|+++|--
T Consensus       105 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~  172 (280)
T 4da9_A          105 FGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSV  172 (280)
T ss_dssp             HSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC
T ss_pred             cCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcch
Confidence              789999999972   122  1222   233445544    44555555655432  5667777643

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=96.81  E-value=0.0099  Score=54.91  Aligned_cols=114  Identities=18%  Similarity=0.224  Sum_probs=68.0

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--------------chhHHHHhhcccCCCeEEEEe-CCCC---
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--------------TPGVTADISHMDTGAVVRGFL-GQPQ---   81 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--------------~~g~~~dL~~~~~~~~v~~~~-~t~d---   81 (369)
                      .+++.|+||+|++|..++..|+..|.  +|++.|.++              .......+...  ..++..+. .-+|   
T Consensus        10 ~k~~lVTGas~gIG~a~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~   85 (281)
T 3s55_A           10 GKTALITGGARGMGRSHAVALAEAGA--DIAICDRCENSDVVGYPLATADDLAETVALVEKT--GRRCISAKVDVKDRAA   85 (281)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCccccccccccccHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHH
Confidence            46899999999999999999999998  899999862              11111222221  23333322 1223   


Q ss_pred             hhhhc-------CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHH----HhhhCCCeEEEEecC
Q 017551           82 LENAL-------TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEG----IAKCCPNATVNLISN  138 (369)
Q Consensus        82 l~~al-------~~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tN  138 (369)
                      .++.+       ...|++|..||.....   ..+.   ...+..|+.-...+.+.    +.+. ..+.|+++|-
T Consensus        86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS  158 (281)
T 3s55_A           86 LESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKR-NYGRIVTVSS  158 (281)
T ss_dssp             HHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEECC
Confidence            22223       3799999999975321   2232   34456676544444444    4443 3566777753

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=96.79  E-value=0.0091  Score=54.11  Aligned_cols=113  Identities=17%  Similarity=0.246  Sum_probs=67.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC-----
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT-----   87 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~---~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~-----   87 (369)
                      .+++.|+||+|++|..++..|+..+.  +|++.|.+.   ......++...  ..++..+. .-+|   .+++++     
T Consensus         4 ~k~~lVTGas~gIG~~ia~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~   79 (246)
T 3osu_A            4 TKSALVTGASRGIGRSIALQLAEEGY--NVAVNYAGSKEKAEAVVEEIKAK--GVDSFAIQANVADADEVKAMIKEVVSQ   79 (246)
T ss_dssp             SCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT--TSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            35799999999999999999999998  899988754   22233334332  22333222 1223   222333     


Q ss_pred             --CCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHH----HhhhCCCeEEEEec
Q 017551           88 --GMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEG----IAKCCPNATVNLIS  137 (369)
Q Consensus        88 --~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~t  137 (369)
                        ..|++|..||.....   ..+.   ...+..|+.-...+.+.    +.+. ..+.|+++|
T Consensus        80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv~is  140 (246)
T 3osu_A           80 FGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQ-RSGAIINLS  140 (246)
T ss_dssp             HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEC
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEEc
Confidence              789999999975321   1222   33566676544444444    4544 345666665

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=96.79  E-value=0.00078  Score=62.71  Aligned_cols=77  Identities=19%  Similarity=0.173  Sum_probs=51.0

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc----hhHHHHhhcccCCCeEEEEeC----CCChhhhcCCCcE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT----PGVTADISHMDTGAVVRGFLG----QPQLENALTGMDL   91 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~----~g~~~dL~~~~~~~~v~~~~~----t~dl~~al~~ADi   91 (369)
                      .+||.|+||+|++|++++..|+..+.  +|++++.+..    ......+.... ...+....+    ..++.++++++|+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~l~R~~~~~~~~~~~~~~~~l~-~~~v~~v~~D~~d~~~l~~~~~~~d~   80 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGH--PTFLLVRESTASSNSEKAQLLESFK-ASGANIVHGSIDDHASLVEAVKNVDV   80 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC--CEEEECCCCCTTTTHHHHHHHHHHH-TTTCEEECCCTTCHHHHHHHHHTCSE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCC--CEEEEECCcccccCHHHHHHHHHHH-hCCCEEEEeccCCHHHHHHHHcCCCE
Confidence            46899999999999999999999886  8888988742    11111111111 112222211    1246678899999


Q ss_pred             EEEcCCCC
Q 017551           92 VIIPAGVP   99 (369)
Q Consensus        92 Vii~ag~p   99 (369)
                      ||.+++..
T Consensus        81 vi~~a~~~   88 (308)
T 1qyc_A           81 VISTVGSL   88 (308)
T ss_dssp             EEECCCGG
T ss_pred             EEECCcch
Confidence            99998754

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.78  E-value=0.003  Score=57.61  Aligned_cols=110  Identities=15%  Similarity=0.167  Sum_probs=67.3

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC-CCChh---hhcCCCcEEE
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QPQLE---NALTGMDLVI   93 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~-t~dl~---~al~~ADiVi   93 (369)
                      -+.++|.|+||+|++|..++..|+..+.  +|++.|.+..  ...++.      .+..... ..+.+   +.+.+.|+||
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~--~V~~~~r~~~--~~~~~~------~~~~~~D~~~~~~~~~~~~~~iD~lv   86 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLSQEGA--EVTICARNEE--LLKRSG------HRYVVCDLRKDLDLLFEKVKEVDILV   86 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHH--HHHHTC------SEEEECCTTTCHHHHHHHSCCCSEEE
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEcCCHH--HHHhhC------CeEEEeeHHHHHHHHHHHhcCCCEEE
Confidence            3456899999999999999999999987  8999998751  111221      1111110 12333   3344899999


Q ss_pred             EcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 017551           94 IPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        94 i~ag~p~k~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      ..||.....   ..+   ....+..|+.-    .+.+.+.+.+.. .+.|+++|-
T Consensus        87 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS  140 (249)
T 1o5i_A           87 LNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITS  140 (249)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcc
Confidence            999875422   122   23344555433    455566665543 456776653

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=96.78  E-value=0.015  Score=53.79  Aligned_cols=114  Identities=17%  Similarity=0.276  Sum_probs=68.4

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCCh---hhhc-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENAL-------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl---~~al-------   86 (369)
                      .++|.|+||+|++|..++..|+..+.  +|+++|.+.  ......++...  ..++..+. .-+|.   ++++       
T Consensus        44 ~k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  119 (285)
T 2c07_A           44 NKVALVTGAGRGIGREIAKMLAKSVS--HVICISRTQKSCDSVVDEIKSF--GYESSGYAGDVSKKEEISEVINKILTEH  119 (285)
T ss_dssp             SCEEEEESTTSHHHHHHHHHHTTTSS--EEEEEESSHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCC--EEEEEcCCHHHHHHHHHHHHhc--CCceeEEECCCCCHHHHHHHHHHHHHhc
Confidence            46899999999999999999998886  899988765  22233334322  22333322 12232   2222       


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 017551           87 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      .+.|+||..||.....   ..+   ....+..|+..    .+.+.+.+.+.. .+.++++|.
T Consensus       120 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS  180 (285)
T 2c07_A          120 KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISS  180 (285)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECC
Confidence            4789999999875321   122   23455666655    444444444433 456666654

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=96.77  E-value=0.028  Score=51.20  Aligned_cols=117  Identities=17%  Similarity=0.199  Sum_probs=70.3

Q ss_pred             CCCEEEEEcCCC-ccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-----
Q 017551           19 AGFKVAILGAAG-GIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-----   86 (369)
Q Consensus        19 ~~~KI~IiGA~G-~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-----   86 (369)
                      +.+++.|+||+| .+|..++..|++.+.  +|++.|.+.  ......++.... ..++..+. .-+|   .++++     
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGA--DVVISDYHERRLGETRDQLADLG-LGRVEAVVCDVTSTEAVDALITQTVE   97 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTC-SSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHHHhcC-CCceEEEEeCCCCHHHHHHHHHHHHH
Confidence            346899999987 699999999999997  899999986  223333443322 23444432 1223   22222     


Q ss_pred             --CCCcEEEEcCCCCCCCC---CCH---HHHHHHHHHHH----HHHHHHHhhhCCCeEEEEecC
Q 017551           87 --TGMDLVIIPAGVPRKPG---MTR---DDLFNINAGIV----RTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        87 --~~ADiVii~ag~p~k~g---~~r---~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tN  138 (369)
                        ...|++|..||......   .+.   ...+..|+.-.    +.+.+.+.+....+.|+++|-
T Consensus        98 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS  161 (266)
T 3o38_A           98 KAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNAS  161 (266)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECC
T ss_pred             HhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence              36799999999754221   222   33455665444    444444444445676777653

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.77  E-value=0.0021  Score=57.60  Aligned_cols=96  Identities=18%  Similarity=0.191  Sum_probs=59.3

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEE-eCCCChhhhcC------CCcEEE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQLENALT------GMDLVI   93 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~-~~t~dl~~al~------~ADiVi   93 (369)
                      ++|.|+||+|++|..++..|+.++.  +|+++|.+.. .     ...   ..+... +...++.++++      +.|+||
T Consensus         3 k~vlVtGasggiG~~la~~l~~~G~--~V~~~~r~~~-~-----~~~---~~~~~D~~~~~~~~~~~~~~~~~~~~d~li   71 (242)
T 1uay_A            3 RSALVTGGASGLGRAAALALKARGY--RVVVLDLRRE-G-----EDL---IYVEGDVTREEDVRRAVARAQEEAPLFAVV   71 (242)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTC--EEEEEESSCC-S-----SSS---EEEECCTTCHHHHHHHHHHHHHHSCEEEEE
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC--EEEEEccCcc-c-----cce---EEEeCCCCCHHHHHHHHHHHHhhCCceEEE
Confidence            5899999999999999999999887  8999998752 0     100   001100 00112333443      789999


Q ss_pred             EcCCCCCCCC---C-------CHHHHHHHHHHHHHHHHHHHhhh
Q 017551           94 IPAGVPRKPG---M-------TRDDLFNINAGIVRTLCEGIAKC  127 (369)
Q Consensus        94 i~ag~p~k~g---~-------~r~~~~~~N~~i~~~i~~~i~~~  127 (369)
                      ..+|......   .       .....+..|+.....+.+.+...
T Consensus        72 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  115 (242)
T 1uay_A           72 SAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWA  115 (242)
T ss_dssp             ECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             EcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            9998653221   1       22445566766655555555443

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=96.76  E-value=0.0049  Score=58.39  Aligned_cols=63  Identities=22%  Similarity=0.424  Sum_probs=48.6

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP   95 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~   95 (369)
                      +||++||- |.+|++++..|...++  +|+.||++..  .+.+|....    .+.   ..++.++.++||+||..
T Consensus         4 ~kIgfIGl-G~MG~~mA~~L~~~G~--~v~v~dr~~~--~~~~l~~~G----a~~---a~s~~e~~~~~dvv~~~   66 (300)
T 3obb_A            4 KQIAFIGL-GHMGAPMATNLLKAGY--LLNVFDLVQS--AVDGLVAAG----ASA---ARSARDAVQGADVVISM   66 (300)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTC--EEEEECSSHH--HHHHHHHTT----CEE---CSSHHHHHTTCSEEEEC
T ss_pred             CEEEEeee-hHHHHHHHHHHHhCCC--eEEEEcCCHH--HHHHHHHcC----CEE---cCCHHHHHhcCCceeec
Confidence            49999999 9999999999999998  9999999752  223333321    121   24578899999999997

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=96.76  E-value=0.015  Score=52.96  Aligned_cols=116  Identities=15%  Similarity=0.108  Sum_probs=68.5

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCC-CeEEEEe-CCCCh---hhh-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG-AVVRGFL-GQPQL---ENA-------   85 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~-~~v~~~~-~t~dl---~~a-------   85 (369)
                      .+.+.|+||+|++|..++..|+..|.  +|++.|.+.  ......++...... ..+..+. .-+|.   .++       
T Consensus         7 ~k~~lVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (250)
T 3nyw_A            7 KGLAIITGASQGIGAVIAAGLATDGY--RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK   84 (250)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHHTC--EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence            45899999999999999999999987  999999986  22333333322111 2222221 12232   222       


Q ss_pred             cCCCcEEEEcCCCCCCC--CCC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 017551           86 LTGMDLVIIPAGVPRKP--GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        86 l~~ADiVii~ag~p~k~--g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      +...|++|..||.....  ..+   ....+..|+.-    .+.+.+.+.+. ..+.|+++|-
T Consensus        85 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS  145 (250)
T 3nyw_A           85 YGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQ-KNGYIFNVAS  145 (250)
T ss_dssp             HCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred             cCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEEcc
Confidence            23689999999974322  222   23345556544    44444444444 3566777764

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=96.75  E-value=0.0056  Score=56.40  Aligned_cols=117  Identities=16%  Similarity=0.179  Sum_probs=73.0

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHhhcccCCCeEEEEe-CCCCh---hhhc-----
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQL---ENAL-----   86 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~---~~g~~~dL~~~~~~~~v~~~~-~t~dl---~~al-----   86 (369)
                      +.+++.|+||+|++|..++..|+..|.  +|++.|.+.   ......++...  ..++..+. .-+|.   .+++     
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   92 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRLGA--KVVVNYANSTKDAEKVVSEIKAL--GSDAIAIKADIRQVPEIVKLFDQAVA   92 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            346899999999999999999999998  899988765   22233334332  23333332 12332   2222     


Q ss_pred             --CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCC
Q 017551           87 --TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNP  139 (369)
Q Consensus        87 --~~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP  139 (369)
                        ...|++|..||.....   ..+   ....+..|+.-...+.+.+..+- ..+.|++++--
T Consensus        93 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~  154 (270)
T 3is3_A           93 HFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSN  154 (270)
T ss_dssp             HHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCT
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCc
Confidence              3789999999975321   123   23456778776666666666554 34566666543

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=96.75  E-value=0.0077  Score=54.61  Aligned_cols=117  Identities=14%  Similarity=0.180  Sum_probs=68.2

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc------
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL------   86 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al------   86 (369)
                      +.++|.|+||+|++|..++..|+..+.  +|+++|.+..  .....++.... ..++..+. .-+|   +.+++      
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~   89 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGA--NVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDVSNTDIVTKTIQQIDAD   89 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTE--EEEEEESSCTTHHHHHHHHHHHH-TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC--eEEEEeCcchhhHHHHHHHHHhc-CCeeEEEEeeCCCHHHHHHHHHHHHHh
Confidence            346899999999999999999999987  9999998652  22223332211 12333322 1122   22222      


Q ss_pred             -CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHH----hhhCCCeEEEEecC
Q 017551           87 -TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGI----AKCCPNATVNLISN  138 (369)
Q Consensus        87 -~~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tN  138 (369)
                       ...|+||..||.....   ..+   ....+..|+.....+.+.+    .+....+.++++|-
T Consensus        90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS  152 (265)
T 1h5q_A           90 LGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSS  152 (265)
T ss_dssp             SCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred             cCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCC
Confidence             3589999999875321   122   2334566665544444444    33333466776653

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=96.75  E-value=0.025  Score=52.44  Aligned_cols=115  Identities=17%  Similarity=0.180  Sum_probs=69.0

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHhhcccCCCeEEEEe-CCCC---hhhhc------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~---~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al------   86 (369)
                      .+++.|+||+|+||..++..|+..|.  +|++.|.+.   ......++.... ...+..+. .-+|   .++++      
T Consensus        25 ~k~~lVTGas~GIG~~ia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~  101 (281)
T 3v2h_A           25 TKTAVITGSTSGIGLAIARTLAKAGA--NIVLNGFGAPDEIRTVTDEVAGLS-SGTVLHHPADMTKPSEIADMMAMVADR  101 (281)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTC--EEEEECCCCHHHHHHHHHHHHTTC-SSCEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCChHHHHHHHHHHhhcc-CCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            35899999999999999999999998  999999854   222333343221 23444332 1122   22222      


Q ss_pred             -CCCcEEEEcCCCCCCCC---CCH---HHHHHHHHHHHHHH----HHHHhhhCCCeEEEEecC
Q 017551           87 -TGMDLVIIPAGVPRKPG---MTR---DDLFNINAGIVRTL----CEGIAKCCPNATVNLISN  138 (369)
Q Consensus        87 -~~ADiVii~ag~p~k~g---~~r---~~~~~~N~~i~~~i----~~~i~~~~p~a~viv~tN  138 (369)
                       ...|++|..||......   .+.   ...+..|+.-...+    .+.+.+. ..+.|+++|-
T Consensus       102 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS  163 (281)
T 3v2h_A          102 FGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKK-GWGRIINIAS  163 (281)
T ss_dssp             TSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred             CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEECC
Confidence             37899999999754221   232   33456665544444    4444544 3466676653

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.74  E-value=0.025  Score=51.96  Aligned_cols=116  Identities=15%  Similarity=0.198  Sum_probs=68.3

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc------
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL------   86 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al------   86 (369)
                      +.+++.|+||+|++|..++..|+..|.  +|++.|.+..  .....++.... ..++..+. .-+|   +.+++      
T Consensus        20 ~~k~~lVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (267)
T 1vl8_A           20 RGRVALVTGGSRGLGFGIAQGLAEAGC--SVVVASRNLEEASEAAQKLTEKY-GVETMAFRCDVSNYEEVKKLLEAVKEK   96 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            346899999999999999999999987  8999998762  22233331111 12333221 1223   22222      


Q ss_pred             -CCCcEEEEcCCCCCCCC---CCH---HHHHHHHHHHHHHHHHH----HhhhCCCeEEEEecC
Q 017551           87 -TGMDLVIIPAGVPRKPG---MTR---DDLFNINAGIVRTLCEG----IAKCCPNATVNLISN  138 (369)
Q Consensus        87 -~~ADiVii~ag~p~k~g---~~r---~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tN  138 (369)
                       ...|++|..||......   .+.   ...+..|+.-...+.+.    +.+. ..+.|+++|-
T Consensus        97 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS  158 (267)
T 1vl8_A           97 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRES-DNPSIINIGS  158 (267)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTC-SSCEEEEECC
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEECC
Confidence             37899999999754221   222   34456666555444444    4332 2455666653

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=96.74  E-value=0.0039  Score=57.14  Aligned_cols=115  Identities=13%  Similarity=0.135  Sum_probs=71.8

Q ss_pred             CCEEEEEcCC--CccHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHhhcccCCC-eEEEEeCCCC---hhhhcC-----
Q 017551           20 GFKVAILGAA--GGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGA-VVRGFLGQPQ---LENALT-----   87 (369)
Q Consensus        20 ~~KI~IiGA~--G~vGs~la~~l~~~~~~~el~L~D~~~-~~g~~~dL~~~~~~~-~v~~~~~t~d---l~~al~-----   87 (369)
                      .++|.|+||+  |++|..++..|+..+.  +|++.|.+. ......++....... .+..  .-+|   ..++++     
T Consensus         9 ~k~vlVTGas~~~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~--D~~~~~~v~~~~~~~~~~   84 (265)
T 1qsg_A            9 GKRILVTGVASKLSIAYGIAQAMHREGA--ELAFTYQNDKLKGRVEEFAAQLGSDIVLQC--DVAEDASIDTMFAELGKV   84 (265)
T ss_dssp             TCEEEECCCCSTTSHHHHHHHHHHHTTC--EEEEEESSTTTHHHHHHHHHHTTCCCEEEC--CTTCHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHCCC--EEEEEcCcHHHHHHHHHHHHhcCCcEEEEc--cCCCHHHHHHHHHHHHHH
Confidence            3579999998  8999999999999987  899999876 222223332211111 1111  1122   222232     


Q ss_pred             --CCcEEEEcCCCCCC-----C--C-CC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 017551           88 --GMDLVIIPAGVPRK-----P--G-MT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  138 (369)
Q Consensus        88 --~ADiVii~ag~p~k-----~--g-~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN  138 (369)
                        ..|++|..||....     +  . .+   ....+..|+.-...+.+.+..+. +.+.|+++|.
T Consensus        85 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS  149 (265)
T 1qsg_A           85 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSY  149 (265)
T ss_dssp             CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred             cCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcc
Confidence              67999999997542     1  1 22   23456778887777777776653 2356777763

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=96.74  E-value=0.001  Score=60.23  Aligned_cols=112  Identities=13%  Similarity=0.054  Sum_probs=66.4

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhc---------CCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL---------TGM   89 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al---------~~A   89 (369)
                      +.++|.|+||+|++|..++..|+..+.  +|++.|.+...... .. + ....++..   ..+..+++         .+.
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~-~~-~-~~~~D~~~---~~~v~~~~~~~~~~~~~g~i   77 (241)
T 1dhr_A            6 EARRVLVYGGRGALGSRCVQAFRARNW--WVASIDVVENEEAS-AS-V-IVKMTDSF---TEQADQVTAEVGKLLGDQKV   77 (241)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTC--EEEEEESSCCTTSS-EE-E-ECCCCSCH---HHHHHHHHHHHHHHHTTCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCC--EEEEEeCChhhccC-Cc-E-EEEcCCCC---HHHHHHHHHHHHHHhCCCCC
Confidence            346899999999999999999999987  89999987621100 00 0 00011110   11122222         378


Q ss_pred             cEEEEcCCCCCCC----CCC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 017551           90 DLVIIPAGVPRKP----GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  138 (369)
Q Consensus        90 DiVii~ag~p~k~----g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN  138 (369)
                      |++|..||.....    ..+   ....+..|+.....+.+.+..+. ..+.|+++|-
T Consensus        78 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS  134 (241)
T 1dhr_A           78 DAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGA  134 (241)
T ss_dssp             EEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             CEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECC
Confidence            9999999864321    111   23445667666666666555442 2466777753

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=96.73  E-value=0.011  Score=54.11  Aligned_cols=115  Identities=16%  Similarity=0.167  Sum_probs=67.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHhhcccCCCeEEEEe-CCCCh---hhhc------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQL---ENAL------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~---~~g~~~dL~~~~~~~~v~~~~-~t~dl---~~al------   86 (369)
                      .++|.|+||+|++|..++..|+..|.  ++++.+...   ......++...  ..++..+. .-+|.   .+++      
T Consensus        26 ~k~vlVTGas~gIG~~la~~l~~~G~--~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~  101 (267)
T 4iiu_A           26 SRSVLVTGASKGIGRAIARQLAADGF--NIGVHYHRDAAGAQETLNAIVAN--GGNGRLLSFDVANREQCREVLEHEIAQ  101 (267)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCchHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            35899999999999999999999997  776655443   22223333322  23333332 12232   2223      


Q ss_pred             -CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHH----HHHHhhhCCCeEEEEecC
Q 017551           87 -TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTL----CEGIAKCCPNATVNLISN  138 (369)
Q Consensus        87 -~~ADiVii~ag~p~k~g---~~---r~~~~~~N~~i~~~i----~~~i~~~~p~a~viv~tN  138 (369)
                       ...|+||..||......   .+   ....+..|+.-...+    ...+.+....+.|+++|-
T Consensus       102 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS  164 (267)
T 4iiu_A          102 HGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSS  164 (267)
T ss_dssp             HCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred             hCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Confidence             37899999999754221   22   234456665544444    444443456777777763

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=96.73  E-value=0.0065  Score=56.52  Aligned_cols=114  Identities=18%  Similarity=0.086  Sum_probs=73.5

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC---CCcE
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENALT---GMDL   91 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~---~ADi   91 (369)
                      +.++|.|+||+|+||..++..|+..+.  +|++.|.+......  +.... ..++..+. .-+|   ..++++   ..|+
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~--~V~~~~r~~~~~~~--~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~   89 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGA--TVIMAVRDTRKGEA--AARTM-AGQVEVRELDLQDLSSVRRFADGVSGADV   89 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHH--HHTTS-SSEEEEEECCTTCHHHHHHHHHTCCCEEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEECCHHHHHH--HHHHh-cCCeeEEEcCCCCHHHHHHHHHhcCCCCE
Confidence            456899999999999999999999997  99999998632211  11111 23444332 1223   223333   6699


Q ss_pred             EEEcCCCCCCC-C---CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 017551           92 VIIPAGVPRKP-G---MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        92 Vii~ag~p~k~-g---~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      +|..||....+ .   ......+..|+.-...+.+.+.....+ .|+++|-
T Consensus        90 lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-riv~isS  139 (291)
T 3rd5_A           90 LINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTD-RVVTVSS  139 (291)
T ss_dssp             EEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE-EEEEECC
T ss_pred             EEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-heeEeec
Confidence            99999974322 1   223456788888888888877766543 4666553

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=96.73  E-value=0.0064  Score=55.70  Aligned_cols=113  Identities=17%  Similarity=0.160  Sum_probs=66.5

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEE-eCCC--chhHHHHhhcccCCCeEEEEe-CCCCh---hhhc------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLY-DVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENAL------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~-D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl---~~al------   86 (369)
                      .+++.|+||+|++|..++..|+..+.  ++++. +.+.  ......++...  ..++..+. .-+|.   ++++      
T Consensus         4 ~k~vlVTGas~gIG~aia~~l~~~G~--~vv~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (258)
T 3oid_A            4 NKCALVTGSSRGVGKAAAIRLAENGY--NIVINYARSKKAALETAEEIEKL--GVKVLVVKANVGQPAKIKEMFQQIDET   79 (258)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45899999999999999999999997  88886 6654  22233334332  23344332 12232   2223      


Q ss_pred             -CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHH----HhhhCCCeEEEEec
Q 017551           87 -TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEG----IAKCCPNATVNLIS  137 (369)
Q Consensus        87 -~~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~t  137 (369)
                       ...|++|..||.....   ..+.   ...+..|+.-...+.+.    +.+. ..+.|+++|
T Consensus        80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-~~g~iv~is  140 (258)
T 3oid_A           80 FGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKN-GGGHIVSIS  140 (258)
T ss_dssp             HSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-TCEEEEEEE
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEC
Confidence             3569999999864321   1222   33456665544444444    4433 356677665

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=96.72  E-value=0.022  Score=51.24  Aligned_cols=110  Identities=15%  Similarity=0.231  Sum_probs=65.1

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhh-------hcCCCcEEE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLEN-------ALTGMDLVI   93 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~-------al~~ADiVi   93 (369)
                      +++.|+||+|++|..++..|+..+.  +|++.|.+... ...++. .   ..+.......+..+       .+.+.|++|
T Consensus         3 k~vlVTGas~giG~~~a~~l~~~G~--~V~~~~r~~~~-~~~~~~-~---~~~~~D~~~~~~~~~~~~~~~~~g~id~lv   75 (239)
T 2ekp_A            3 RKALVTGGSRGIGRAIAEALVARGY--RVAIASRNPEE-AAQSLG-A---VPLPTDLEKDDPKGLVKRALEALGGLHVLV   75 (239)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCHH-HHHHHT-C---EEEECCTTTSCHHHHHHHHHHHHTSCCEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHH-HHHhhC-c---EEEecCCchHHHHHHHHHHHHHcCCCCEEE
Confidence            5899999999999999999999987  89999998632 222221 0   01111100122222       345899999


Q ss_pred             EcCCCCCC-C--CCC---HHHHHHHHHHHH----HHHHHHHhhhCCCeEEEEecC
Q 017551           94 IPAGVPRK-P--GMT---RDDLFNINAGIV----RTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        94 i~ag~p~k-~--g~~---r~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tN  138 (369)
                      ..||.... +  ..+   ....+..|+...    +.+.+.+.+.. .+.|+++|.
T Consensus        76 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS  129 (239)
T 2ekp_A           76 HAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG-WGRVLFIGS  129 (239)
T ss_dssp             ECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECc
Confidence            99986432 1  122   233455565444    44444444443 466777653

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=96.72  E-value=0.012  Score=54.76  Aligned_cols=114  Identities=18%  Similarity=0.257  Sum_probs=69.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCCh---hhhc-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENAL-------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl---~~al-------   86 (369)
                      .+.+.|+||+|+||..++..|+..+.  +|++.|.+.  ......++...  ..++..+. .-+|.   ++++       
T Consensus        28 ~k~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  103 (283)
T 3v8b_A           28 SPVALITGAGSGIGRATALALAADGV--TVGALGRTRTEVEEVADEIVGA--GGQAIALEADVSDELQMRNAVRDLVLKF  103 (283)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHTTT--TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            45789999999999999999999997  999999886  23333444332  22333322 12232   2222       


Q ss_pred             CCCcEEEEcCCCCC--CC--CCCH---HHHHHHHHHHH----HHHHHHHhhhCCCeEEEEecC
Q 017551           87 TGMDLVIIPAGVPR--KP--GMTR---DDLFNINAGIV----RTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        87 ~~ADiVii~ag~p~--k~--g~~r---~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tN  138 (369)
                      ...|++|..||...  .+  ..+.   ...+..|+.-.    +.+.+.+.+. ..+.|+++|-
T Consensus       104 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~Iv~isS  165 (283)
T 3v8b_A          104 GHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQR-GGGAIVVVSS  165 (283)
T ss_dssp             SCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred             CCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCceEEEEcC
Confidence            37999999999743  22  2232   34456665444    4444444544 3566777654

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=96.72  E-value=0.0067  Score=55.82  Aligned_cols=114  Identities=20%  Similarity=0.233  Sum_probs=68.2

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc---hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-----
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-----   86 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~---~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-----   86 (369)
                      +.++|.|+||+|++|..++..|+..+.  +|++.|.+..   ......+...  ..++..+. .-+|   ..+++     
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~  103 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGL--KVWINYRSNAEVADALKNELEEK--GYKAAVIKFDAASESDFIEAIQTIVQ  103 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHH
Confidence            456899999999999999999999998  8999998651   2222223322  23333332 1122   22223     


Q ss_pred             --CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEec
Q 017551           87 --TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        87 --~~ADiVii~ag~p~k~g---~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~t  137 (369)
                        .+.|++|..||......   .+   ....+..|+.-    .+.+.+.+.+. ..+.|+++|
T Consensus       104 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~is  165 (271)
T 4iin_A          104 SDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKS-RFGSVVNVA  165 (271)
T ss_dssp             HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEC
T ss_pred             hcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhc-CCCEEEEEe
Confidence              37999999999754321   22   23445566543    44444545444 345666665

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=96.72  E-value=0.012  Score=55.72  Aligned_cols=115  Identities=17%  Similarity=0.217  Sum_probs=68.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--------------chhHHHHhhcccCCCeEEEEe-CCCC---
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--------------TPGVTADISHMDTGAVVRGFL-GQPQ---   81 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--------------~~g~~~dL~~~~~~~~v~~~~-~t~d---   81 (369)
                      .+.+.|+||+|+||..++..|+..|.  +|+++|.+.              .......+...  ..++..+. .-+|   
T Consensus        46 gk~~lVTGas~GIG~aia~~la~~G~--~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~  121 (317)
T 3oec_A           46 GKVAFITGAARGQGRTHAVRLAQDGA--DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ--GRRIIARQADVRDLAS  121 (317)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--eEEEEecccccccccccccCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHH
Confidence            35789999999999999999999998  999999862              11111122211  23343332 1223   


Q ss_pred             hhhhc-------CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 017551           82 LENAL-------TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        82 l~~al-------~~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      .++.+       ...|++|..||.....   ..+.   ...+..|+.-    .+.+.+.+.+....+.||++|-
T Consensus       122 v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS  195 (317)
T 3oec_A          122 LQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSS  195 (317)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECc
Confidence            22222       3789999999975421   2232   3445666544    4445555555555677777764

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=96.71  E-value=0.011  Score=53.97  Aligned_cols=114  Identities=12%  Similarity=0.171  Sum_probs=67.8

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch----hHHHHhhcccCCCeEEEEe-CCCCh---hhhcC-----
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP----GVTADISHMDTGAVVRGFL-GQPQL---ENALT-----   87 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~----g~~~dL~~~~~~~~v~~~~-~t~dl---~~al~-----   87 (369)
                      +++.|+||+|++|..++..|+..+.  +|++.|.+...    ....++...  ..++..+. .-+|.   .++++     
T Consensus         3 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   78 (258)
T 3a28_C            3 KVAMVTGGAQGIGRGISEKLAADGF--DIAVADLPQQEEQAAETIKLIEAA--DQKAVFVGLDVTDKANFDSAIDEAAEK   78 (258)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTC--EEEEEECGGGHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4799999999999999999999887  89999987532    112233221  22333322 12232   22332     


Q ss_pred             --CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 017551           88 --GMDLVIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        88 --~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN  138 (369)
                        ..|++|..||.....   ..+   ....+..|+.-    .+.+.+.+.+....+.|+++|-
T Consensus        79 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS  141 (258)
T 3a28_C           79 LGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAAS  141 (258)
T ss_dssp             HTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECC
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECc
Confidence              789999999875321   122   23445666554    4444455544443256666653

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=96.71  E-value=0.0058  Score=55.69  Aligned_cols=111  Identities=7%  Similarity=0.019  Sum_probs=66.7

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch-hHHHHhhcccCCCeEEEEeCCCChhhhc-------CCCcEEE
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGFLGQPQLENAL-------TGMDLVI   93 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~-g~~~dL~~~~~~~~v~~~~~t~dl~~al-------~~ADiVi   93 (369)
                      ++.|+||+|++|..++..|+..+.  +|++.|.+... ....++....  .++... ...+.++++       ...|++|
T Consensus         3 ~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~l~~~~--~~~~~~-d~~~v~~~~~~~~~~~g~iD~lv   77 (254)
T 1zmt_A            3 TAIVTNVKHFGGMGSALRLSEAGH--TVACHDESFKQKDELEAFAETY--PQLKPM-SEQEPAELIEAVTSAYGQVDVLV   77 (254)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTC--EEEECCGGGGSHHHHHHHHHHC--TTSEEC-CCCSHHHHHHHHHHHHSCCCEEE
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHhcC--CcEEEE-CHHHHHHHHHHHHHHhCCCCEEE
Confidence            689999999999999999999987  89999987621 1122232211  122211 233444433       3789999


Q ss_pred             EcCCCC-C-CC--CCCH---HHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 017551           94 IPAGVP-R-KP--GMTR---DDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        94 i~ag~p-~-k~--g~~r---~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      ..||.. . .+  ..+.   ...+..|+.-    .+.+.+.+.+.. .+.|+++|-
T Consensus        78 ~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS  132 (254)
T 1zmt_A           78 SNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITS  132 (254)
T ss_dssp             EECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECC
T ss_pred             ECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECC
Confidence            999975 3 22  1222   3345566544    444444444443 456777654

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.71  E-value=0.0035  Score=58.08  Aligned_cols=115  Identities=14%  Similarity=0.171  Sum_probs=67.5

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccC-CCeEEEEe-CCCCh---hhhc------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDT-GAVVRGFL-GQPQL---ENAL------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~-~~~v~~~~-~t~dl---~~al------   86 (369)
                      .+++.|+||+|++|..++..|+..+.  +|++.|.+..  .....++..... ..++..+. .-+|.   ++++      
T Consensus         6 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (280)
T 1xkq_A            6 NKTVIITGSSNGIGRTTAILFAQEGA--NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   83 (280)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence            35899999999999999999999987  9999999762  222233332110 01344332 12232   2223      


Q ss_pred             -CCCcEEEEcCCCCCC-C------CCC---HHHHHHHHHHHHHHHHHH----HhhhCCCeEEEEecC
Q 017551           87 -TGMDLVIIPAGVPRK-P------GMT---RDDLFNINAGIVRTLCEG----IAKCCPNATVNLISN  138 (369)
Q Consensus        87 -~~ADiVii~ag~p~k-~------g~~---r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tN  138 (369)
                       ...|++|..||.... +      ..+   ....+..|+.-...+.+.    +.+..  +.|+++|.
T Consensus        84 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS  148 (280)
T 1xkq_A           84 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK--GEIVNVSS  148 (280)
T ss_dssp             HSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECC
T ss_pred             cCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC--CcEEEecC
Confidence             368999999987532 2      122   233455665544444444    33332  66776653

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=96.70  E-value=0.03  Score=50.73  Aligned_cols=113  Identities=20%  Similarity=0.263  Sum_probs=69.0

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHhhcccCCCeEEEEe-CCCCh---hhh-------cC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFL-GQPQL---ENA-------LT   87 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-~~g~~~dL~~~~~~~~v~~~~-~t~dl---~~a-------l~   87 (369)
                      .++|.|+||+|++|..++..|+..+.  +|++.|.+. .... ..+...  ..++..+. .-+|.   +++       +.
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~-~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (249)
T 2ew8_A            7 DKLAVITGGANGIGRAIAERFAVEGA--DIAIADLVPAPEAE-AAIRNL--GRRVLTVKCDVSQPGDVEAFGKQVISTFG   81 (249)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCCHHHH-HHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEcCCchhHHH-HHHHhc--CCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            45899999999999999999999987  899999876 3221 123221  12333322 12232   222       34


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 017551           88 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        88 ~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      +.|++|..||.....   ..+   ....+..|+.-    .+.+.+.+.+.. .+.|+++|-
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS  141 (249)
T 2ew8_A           82 RCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTS  141 (249)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcc
Confidence            789999999875321   122   23455667655    444445465543 466776653

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=96.70  E-value=0.003  Score=56.63  Aligned_cols=109  Identities=20%  Similarity=0.147  Sum_probs=64.1

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhcCCC----cE
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALTGM----DL   91 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~~A----Di   91 (369)
                      +|.|+||+|++|..++..|+..|.  +|++.|.+..  .....++.     .++.... .-+|   ..+.++..    |+
T Consensus         3 ~vlVTGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~d~   75 (230)
T 3guy_A            3 LIVITGASSGLGAELAKLYDAEGK--ATYLTGRSESKLSTVTNCLS-----NNVGYRARDLASHQEVEQLFEQLDSIPST   75 (230)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHTTC--CEEEEESCHHHHHHHHHTCS-----SCCCEEECCTTCHHHHHHHHHSCSSCCSE
T ss_pred             EEEEecCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHh-----hccCeEeecCCCHHHHHHHHHHHhhcCCE
Confidence            589999999999999999999997  8999999862  22222221     1111111 1122   23333333    89


Q ss_pred             EEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhhC-C-CeEEEEec
Q 017551           92 VIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKCC-P-NATVNLIS  137 (369)
Q Consensus        92 Vii~ag~p~k~g---~~---r~~~~~~N~~i~~~i~~~i~~~~-p-~a~viv~t  137 (369)
                      ||..||......   .+   ....+..|+.-...+.+.+..+. . ...++++|
T Consensus        76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~is  129 (230)
T 3guy_A           76 VVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIM  129 (230)
T ss_dssp             EEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEEC
T ss_pred             EEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe
Confidence            999998754221   22   23455667665555555554432 1 22566654

>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}

Probab=96.69  E-value=0.0054  Score=58.58  Aligned_cols=129  Identities=19%  Similarity=0.200  Sum_probs=76.0

Q ss_pred             CCCEEEEEcCCCccHHH-HHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhc--CCCcEEEEc
Q 017551           19 AGFKVAILGAAGGIGQP-LAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL--TGMDLVIIP   95 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~-la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al--~~ADiVii~   95 (369)
                      ..+||.|||. |.+|.+ +|..|+..|.  +|.++|.+........|...  ...+  +.+. +. +.+  .++|+||.+
T Consensus         3 ~~~~i~~iGi-Gg~Gms~~A~~L~~~G~--~V~~~D~~~~~~~~~~L~~~--gi~v--~~g~-~~-~~l~~~~~d~vV~S   73 (326)
T 3eag_A            3 AMKHIHIIGI-GGTFMGGLAAIAKEAGF--EVSGCDAKMYPPMSTQLEAL--GIDV--YEGF-DA-AQLDEFKADVYVIG   73 (326)
T ss_dssp             CCCEEEEESC-CSHHHHHHHHHHHHTTC--EEEEEESSCCTTHHHHHHHT--TCEE--EESC-CG-GGGGSCCCSEEEEC
T ss_pred             CCcEEEEEEE-CHHHHHHHHHHHHhCCC--EEEEEcCCCCcHHHHHHHhC--CCEE--ECCC-CH-HHcCCCCCCEEEEC
Confidence            3579999999 999995 8889999998  99999987522122234432  2233  3332 33 345  489999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhh-hCCCeEEEEecCCCC--ChhHHHHHHHHHhCCCCC
Q 017551           96 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAK-CCPNATVNLISNPVN--STVPIAAEVFKKAGTYDP  159 (369)
Q Consensus        96 ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~-~~p~a~viv~tNPv~--~~t~i~ae~~~~~~~~~~  159 (369)
                      .|+|...-+ ......++++++.++ +.+.+ ...+..+|-+|--.+  +++.+++++++.. ++++
T Consensus        74 pgi~~~~p~-~~~a~~~gi~v~~~~-e~~~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~-g~~~  137 (326)
T 3eag_A           74 NVAKRGMDV-VEAILNLGLPYISGP-QWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLEYA-GLAP  137 (326)
T ss_dssp             TTCCTTCHH-HHHHHHTTCCEEEHH-HHHHHHTGGGSEEEEEESSSCHHHHHHHHHHHHHHT-TCCC
T ss_pred             CCcCCCCHH-HHHHHHcCCcEEeHH-HHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHHc-CCCc
Confidence            888753211 112223445555443 22222 223444555655554  5667777777665 4544

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=96.69  E-value=0.011  Score=54.44  Aligned_cols=115  Identities=21%  Similarity=0.250  Sum_probs=70.5

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCC-------------C--chhHHHHhhcccCCCeEEEEe-CCCCh-
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-------------N--TPGVTADISHMDTGAVVRGFL-GQPQL-   82 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~-------------~--~~g~~~dL~~~~~~~~v~~~~-~t~dl-   82 (369)
                      .+.+.|+||+|+||..++..|+..+.  +|+++|++             .  ......++...  ..++..+. .-+|. 
T Consensus        11 ~k~~lVTGas~GIG~a~a~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~   86 (277)
T 3tsc_A           11 GRVAFITGAARGQGRAHAVRMAAEGA--DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA--NRRIVAAVVDTRDFD   86 (277)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTCHH
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCC--EEEEEeccccccccccccccCHHHHHHHHHHHHhc--CCeEEEEECCCCCHH
Confidence            45899999999999999999999998  99999983             1  11122222221  23333322 12332 


Q ss_pred             --hhh-------cCCCcEEEEcCCCCCCC---CCCH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 017551           83 --ENA-------LTGMDLVIIPAGVPRKP---GMTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        83 --~~a-------l~~ADiVii~ag~p~k~---g~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                        .+.       +...|++|..||.....   ..+.   ...+..|+.    +.+.+.+.+.+....+.||++|-
T Consensus        87 ~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS  161 (277)
T 3tsc_A           87 RLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISS  161 (277)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEcc
Confidence              122       24689999999975422   1232   334556644    45555666666655677777764

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.69  E-value=0.0069  Score=55.56  Aligned_cols=113  Identities=18%  Similarity=0.097  Sum_probs=67.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCCh---hhhc-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENAL-------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl---~~al-------   86 (369)
                      .+++.|+||+|++|..++..|+..+.  +|++.|.+.  ......++...  ..++..+. .-+|.   ++.+       
T Consensus        11 ~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   86 (264)
T 3ucx_A           11 DKVVVISGVGPALGTTLARRCAEQGA--DLVLAARTVERLEDVAKQVTDT--GRRALSVGTDITDDAQVAHLVDETMKAY   86 (264)
T ss_dssp             TCEEEEESCCTTHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CcEEEEECCCcHHHHHHHHHHHHCcC--EEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999998  899999986  23333344332  22333322 12232   2222       


Q ss_pred             CCCcEEEEcCCCCC--CC--CCCH---HHHHHHHHHHHHHH----HHHHhhhCCCeEEEEecC
Q 017551           87 TGMDLVIIPAGVPR--KP--GMTR---DDLFNINAGIVRTL----CEGIAKCCPNATVNLISN  138 (369)
Q Consensus        87 ~~ADiVii~ag~p~--k~--g~~r---~~~~~~N~~i~~~i----~~~i~~~~p~a~viv~tN  138 (369)
                      ...|++|..||...  .+  ..+.   ...+..|+.-...+    .+.+.+.  .+.|+++|-
T Consensus        87 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~g~iv~isS  147 (264)
T 3ucx_A           87 GRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEES--KGAVVNVNS  147 (264)
T ss_dssp             SCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH--TCEEEEECC
T ss_pred             CCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEECc
Confidence            37899999998632  22  1222   33455665444444    4444443  256666653

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=96.69  E-value=0.004  Score=57.29  Aligned_cols=113  Identities=11%  Similarity=0.050  Sum_probs=65.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCC---hhhh-------cCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ---LENA-------LTGM   89 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~d---l~~a-------l~~A   89 (369)
                      .++|.|+||+|+||..++..|+..|.  +|++.|.+.... ...+..... ..+..  .-+|   ..++       +...
T Consensus        27 ~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~-~~~~~~~~~-~~~~~--Dv~~~~~v~~~~~~~~~~~g~i  100 (260)
T 3gem_A           27 SAPILITGASQRVGLHCALRLLEHGH--RVIISYRTEHAS-VTELRQAGA-VALYG--DFSCETGIMAFIDLLKTQTSSL  100 (260)
T ss_dssp             CCCEEESSTTSHHHHHHHHHHHHTTC--CEEEEESSCCHH-HHHHHHHTC-EEEEC--CTTSHHHHHHHHHHHHHHCSCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCChHHH-HHHHHhcCC-eEEEC--CCCCHHHHHHHHHHHHHhcCCC
Confidence            45899999999999999999999987  899999986321 112222110 11111  1122   2222       2478


Q ss_pred             cEEEEcCCCCCCCC--CCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 017551           90 DLVIIPAGVPRKPG--MTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  138 (369)
Q Consensus        90 DiVii~ag~p~k~g--~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN  138 (369)
                      |++|..||......  .+.   ...+..|+.-...+.+.+..+   ...+.|+++|-
T Consensus       101 D~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS  157 (260)
T 3gem_A          101 RAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISD  157 (260)
T ss_dssp             SEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECC
T ss_pred             CEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECC
Confidence            99999999754322  222   235566655444444444322   23466777653

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.69  E-value=0.0064  Score=57.05  Aligned_cols=117  Identities=14%  Similarity=0.220  Sum_probs=67.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccC-CCeEEEEe-CCCC---hhhhc------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDT-GAVVRGFL-GQPQ---LENAL------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~-~~~v~~~~-~t~d---l~~al------   86 (369)
                      .+++.|+||+|++|..++..|+..|.  +|++.|.+..  .....++..... ..++..+. .-+|   .++++      
T Consensus        26 ~k~vlVTGas~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  103 (297)
T 1xhl_A           26 GKSVIITGSSNGIGRSAAVIFAKEGA--QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK  103 (297)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence            46899999999999999999999987  8999999762  222333332110 01333332 1223   22233      


Q ss_pred             -CCCcEEEEcCCCCCC-C----CCC---HHHHHHHHHHHHHHHHHHHhhhC--CCeEEEEecC
Q 017551           87 -TGMDLVIIPAGVPRK-P----GMT---RDDLFNINAGIVRTLCEGIAKCC--PNATVNLISN  138 (369)
Q Consensus        87 -~~ADiVii~ag~p~k-~----g~~---r~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tN  138 (369)
                       ...|++|..||.... +    ..+   ....+..|+.....+.+.+..+.  ..+.|+++|-
T Consensus       104 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS  166 (297)
T 1xhl_A          104 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSS  166 (297)
T ss_dssp             HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred             cCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcC
Confidence             378999999986432 1    122   23345666554444444433321  1266777653

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.69  E-value=0.001  Score=60.02  Aligned_cols=111  Identities=15%  Similarity=0.078  Sum_probs=66.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhc---------CCCc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL---------TGMD   90 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al---------~~AD   90 (369)
                      .++|.|+||+|++|..++..|+..+.  +|++.|.+...... . .+ ....++..   ..+..+++         .+.|
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~-~-~~-~~~~D~~~---~~~~~~~~~~~~~~~~~g~id   74 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGY--TVLNIDLSANDQAD-S-NI-LVDGNKNW---TEQEQSILEQTASSLQGSQVD   74 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE--EEEEEESSCCTTSS-E-EE-ECCTTSCH---HHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEecCcccccc-c-cE-EEeCCCCC---HHHHHHHHHHHHHHhCCCCCC
Confidence            35899999999999999999999987  89999987622100 0 00 00011110   01112222         3789


Q ss_pred             EEEEcCCCCCCC----CCC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 017551           91 LVIIPAGVPRKP----GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  138 (369)
Q Consensus        91 iVii~ag~p~k~----g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN  138 (369)
                      +||..||.....    ..+   ....+..|+.....+.+.+..+. ..+.|+++|-
T Consensus        75 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS  130 (236)
T 1ooe_A           75 GVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGA  130 (236)
T ss_dssp             EEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             EEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECc
Confidence            999999864321    111   23456677777666666665543 2456777754

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=96.67  E-value=0.019  Score=53.06  Aligned_cols=117  Identities=12%  Similarity=0.056  Sum_probs=69.9

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCCh---hhhc------
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENAL------   86 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl---~~al------   86 (369)
                      +.+++.|+||+|+||..++..|+..|.  +|++.|.+.  ......++.... ..++..+. .-+|.   ++++      
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~  102 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRHGC--HTVIASRSLPRVLTAARKLAGAT-GRRCLPLSMDVRAPPAVMAAVDQALKE  102 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTC--EEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            346899999999999999999999987  999999986  222333343211 12333322 12232   2222      


Q ss_pred             -CCCcEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 017551           87 -TGMDLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  138 (369)
Q Consensus        87 -~~ADiVii~ag~p~k-~--g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN  138 (369)
                       ...|++|..||.... +  ..+   ....+..|+.-...+.+.+...   ...+.|+++|-
T Consensus       103 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS  164 (277)
T 4fc7_A          103 FGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITA  164 (277)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECC
T ss_pred             cCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECc
Confidence             378999999986432 1  122   2345566765555555544322   13566777653

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=96.67  E-value=0.012  Score=54.03  Aligned_cols=106  Identities=13%  Similarity=0.101  Sum_probs=64.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------CC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------TG   88 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-------~~   88 (369)
                      .++|.|+||+|++|..++..|+..+.  +|++.|.+...+           .++..+. .-+|   +++++       .+
T Consensus         8 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~-----------~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   74 (264)
T 2dtx_A            8 DKVVIVTGASMGIGRAIAERFVDEGS--KVIDLSIHDPGE-----------AKYDHIECDVTNPDQVKASIDHIFKEYGS   74 (264)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESSCCCS-----------CSSEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEecCcccC-----------CceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            35899999999999999999999987  899999875220           0111110 1112   22222       37


Q ss_pred             CcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 017551           89 MDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  138 (369)
Q Consensus        89 ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN  138 (369)
                      .|+||..||.....   ..+   ....+..|+.-...+.+.+..+   ...+.||++|-
T Consensus        75 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS  133 (264)
T 2dtx_A           75 ISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISS  133 (264)
T ss_dssp             CCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECC
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECC
Confidence            99999999875321   122   2345566766544444444333   13456776653

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=96.67  E-value=0.0063  Score=55.10  Aligned_cols=108  Identities=12%  Similarity=0.142  Sum_probs=65.0

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEE-e--CCCc--hhHHHHhhcccCCCeEEEEeCCCChhhhc-------CC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLY-D--VVNT--PGVTADISHMDTGAVVRGFLGQPQLENAL-------TG   88 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~-D--~~~~--~g~~~dL~~~~~~~~v~~~~~t~dl~~al-------~~   88 (369)
                      +++.|+||+|++|..++..|+..+.  +|++. |  .+..  .....++    ...++.   ...+.++++       ..
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~~~~r~~~~~~~~~~~~----~~~~~~---~~~~v~~~~~~~~~~~g~   72 (244)
T 1zmo_A            2 VIALVTHARHFAGPAAVEALTQDGY--TVVCHDASFADAAERQRFESEN----PGTIAL---AEQKPERLVDATLQHGEA   72 (244)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTC--EEEECCGGGGSHHHHHHHHHHS----TTEEEC---CCCCGGGHHHHHGGGSSC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC--EEEEecCCcCCHHHHHHHHHHh----CCCccc---CHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999999987  89999 5  7652  2222223    111111   123333333       37


Q ss_pred             CcEEEEcCCCCCC----C--CCC---HHHHHHHHHHHHHH----HHHHHhhhCCCeEEEEecC
Q 017551           89 MDLVIIPAGVPRK----P--GMT---RDDLFNINAGIVRT----LCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        89 ADiVii~ag~p~k----~--g~~---r~~~~~~N~~i~~~----i~~~i~~~~p~a~viv~tN  138 (369)
                      .|++|..||....    +  ..+   ....+..|+.-...    +.+.+.+. ..+.|+++|-
T Consensus        73 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS  134 (244)
T 1zmo_A           73 IDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAA-GGASVIFITS  134 (244)
T ss_dssp             EEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred             CCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECC
Confidence            8999999997543    2  122   23455666644444    44444433 3566777753

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=96.66  E-value=0.00091  Score=64.92  Aligned_cols=72  Identities=25%  Similarity=0.271  Sum_probs=46.3

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCChhhhcCCCcEEEEc
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQLENALTGMDLVIIP   95 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~dl~~al~~ADiVii~   95 (369)
                      .-++|||.|+|| |++|+.++..|+.. .  +|.+.|++.....  .+.+..  ..+.... ...++.+.++++|+||.+
T Consensus        13 ~g~~mkilvlGa-G~vG~~~~~~L~~~-~--~v~~~~~~~~~~~--~~~~~~--~~~~~d~~d~~~l~~~~~~~DvVi~~   84 (365)
T 3abi_A           13 EGRHMKVLILGA-GNIGRAIAWDLKDE-F--DVYIGDVNNENLE--KVKEFA--TPLKVDASNFDKLVEVMKEFELVIGA   84 (365)
T ss_dssp             ---CCEEEEECC-SHHHHHHHHHHTTT-S--EEEEEESCHHHHH--HHTTTS--EEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred             cCCccEEEEECC-CHHHHHHHHHHhcC-C--CeEEEEcCHHHHH--HHhccC--CcEEEecCCHHHHHHHHhCCCEEEEe
Confidence            445789999999 99999999888754 3  8999999762211  122211  1222211 123466778999999998


Q ss_pred             C
Q 017551           96 A   96 (369)
Q Consensus        96 a   96 (369)
                      .
T Consensus        85 ~   85 (365)
T 3abi_A           85 L   85 (365)
T ss_dssp             C
T ss_pred             c
Confidence            6

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=96.65  E-value=0.018  Score=53.75  Aligned_cols=115  Identities=18%  Similarity=0.165  Sum_probs=73.3

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc----hhHHHHhhcccCCCeEEEEe-CCCCh---hh-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT----PGVTADISHMDTGAVVRGFL-GQPQL---EN-------   84 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~----~g~~~dL~~~~~~~~v~~~~-~t~dl---~~-------   84 (369)
                      .+++.|+||+|+||..++..|+..|.  +|++.|.+..    ......+...  ..++..+. .-+|.   ++       
T Consensus        49 ~k~vlVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~  124 (294)
T 3r3s_A           49 DRKALVTGGDSGIGRAAAIAYAREGA--DVAINYLPAEEEDAQQVKALIEEC--GRKAVLLPGDLSDESFARSLVHKARE  124 (294)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEECCGGGHHHHHHHHHHHHHT--TCCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCcchhHHHHHHHHHHHc--CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999998  8999998731    1122222221  23333322 11222   11       


Q ss_pred             hcCCCcEEEEcCCCCCCCC----CC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 017551           85 ALTGMDLVIIPAGVPRKPG----MT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  138 (369)
Q Consensus        85 al~~ADiVii~ag~p~k~g----~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN  138 (369)
                      .+...|++|..||.....+    .+   ....+..|+.-...+.+.+...- ..+.||++|-
T Consensus       125 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS  186 (294)
T 3r3s_A          125 ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSS  186 (294)
T ss_dssp             HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred             HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECC
Confidence            2347899999999743211    22   24567788887777887777654 3466777653

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=96.65  E-value=0.0025  Score=58.18  Aligned_cols=110  Identities=14%  Similarity=0.199  Sum_probs=65.7

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------C
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------T   87 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-------~   87 (369)
                      +++.|+||+|++|..++..|+..|.  +|++.|.+..  .....++.     .++..+. .-+|   .++++       .
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   73 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGH--KVIATGRRQERLQELKDELG-----DNLYIAQLDVRNRAAIEEMLASLPAEWC   73 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHC-----TTEEEEECCTTCHHHHHHHHHTSCTTTC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhc-----CceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            3789999999999999999999987  8999999762  22222221     1222221 1122   22222       3


Q ss_pred             CCcEEEEcCCCCC--CC--CCC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 017551           88 GMDLVIIPAGVPR--KP--GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        88 ~ADiVii~ag~p~--k~--g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      +.|++|..||...  .+  ..+   ....+..|+.-    .+.+.+.+.+.. .+.|+++|-
T Consensus        74 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS  134 (248)
T 3asu_A           74 NIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGS  134 (248)
T ss_dssp             CCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECC
T ss_pred             CCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEcc
Confidence            7899999999753  22  122   23445666544    444555554443 456666653

>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*

Probab=96.65  E-value=0.0024  Score=61.55  Aligned_cols=61  Identities=16%  Similarity=0.272  Sum_probs=47.2

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      ..++|+|||. |.||+.++..+...+.  +|..||.+.....           .+..   ..++++.+++||+|++..
T Consensus       163 ~g~~vgIIG~-G~iG~~vA~~l~~~G~--~V~~~dr~~~~~~-----------g~~~---~~~l~ell~~aDvVil~v  223 (333)
T 3ba1_A          163 SGKRVGIIGL-GRIGLAVAERAEAFDC--PISYFSRSKKPNT-----------NYTY---YGSVVELASNSDILVVAC  223 (333)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTC--CEEEECSSCCTTC-----------CSEE---ESCHHHHHHTCSEEEECS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEECCCchhcc-----------Ccee---cCCHHHHHhcCCEEEEec
Confidence            3579999999 9999999999998776  8999998752210           1121   246788899999999984

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=96.64  E-value=0.011  Score=54.59  Aligned_cols=113  Identities=21%  Similarity=0.276  Sum_probs=67.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHhhcccCCCeEEEEe-CCCCh---hhhc------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQL---ENAL------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~---~~g~~~dL~~~~~~~~v~~~~-~t~dl---~~al------   86 (369)
                      .+.+.|+||+|+||..++..|+..|.  +|++.|...   ......++...  ..++..+. .-+|.   ++++      
T Consensus        28 ~k~vlVTGas~gIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~v~~~~~~~~~~  103 (269)
T 4dmm_A           28 DRIALVTGASRGIGRAIALELAAAGA--KVAVNYASSAGAADEVVAAIAAA--GGEAFAVKADVSQESEVEALFAAVIER  103 (269)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCChHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999997  899998854   22223333322  22333322 12232   2222      


Q ss_pred             -CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHH----HHHHHHHhhhCCCeEEEEec
Q 017551           87 -TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIV----RTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        87 -~~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~t  137 (369)
                       ...|++|..||.....   ..+.   ...+..|+.-.    +.+.+.+.+.. .+.|+++|
T Consensus       104 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~is  164 (269)
T 4dmm_A          104 WGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQR-SGRIINIA  164 (269)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEEC
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEC
Confidence             3789999999975422   1222   33455665544    44444444443 45666665

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=96.63  E-value=0.0091  Score=54.15  Aligned_cols=118  Identities=15%  Similarity=0.142  Sum_probs=68.8

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeC-CC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhhc---
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV-VN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL---   86 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~-~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al---   86 (369)
                      ..+.++|.|+||+|++|..++..|+..+.  +|++.|. +.  ......++....  .++..+. .-+|   .++++   
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~   85 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGF--RVVAGCGPNSPRRVKWLEDQKALG--FDFYASEGNVGDWDSTKQAFDKV   85 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTE--EEEEEECTTCSSHHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhcC--CeeEEEecCCCCHHHHHHHHHHH
Confidence            44567999999999999999999999987  8888884 33  222333333221  2222221 1122   22223   


Q ss_pred             ----CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecCC
Q 017551           87 ----TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGI----VRTLCEGIAKCCPNATVNLISNP  139 (369)
Q Consensus        87 ----~~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNP  139 (369)
                          ...|++|..||.....   ..+.   ...+..|+.-    .+.+.+.+.+.. .+.|+++|-.
T Consensus        86 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~  151 (256)
T 3ezl_A           86 KAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSV  151 (256)
T ss_dssp             HHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCC
T ss_pred             HHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcch
Confidence                3789999999875422   1222   3455666555    444455555443 4667777653

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=96.63  E-value=0.005  Score=56.55  Aligned_cols=107  Identities=18%  Similarity=0.159  Sum_probs=64.4

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------cCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LTG   88 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l~~   88 (369)
                      .++|.|+||+|+||..++..|+..|.  +|++.|.+.....     .    ..+..+. .-+|   ..++       +.+
T Consensus        28 ~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~-----~----~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   96 (260)
T 3un1_A           28 QKVVVITGASQGIGAGLVRAYRDRNY--RVVATSRSIKPSA-----D----PDIHTVAGDISKPETADRIVREGIERFGR   96 (260)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESSCCCCS-----S----TTEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCChhhcc-----c----CceEEEEccCCCHHHHHHHHHHHHHHCCC
Confidence            35899999999999999999999998  9999998752110     0    1112111 1112   2222       338


Q ss_pred             CcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHH----HhhhCCCeEEEEecC
Q 017551           89 MDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEG----IAKCCPNATVNLISN  138 (369)
Q Consensus        89 ADiVii~ag~p~k~g---~~---r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tN  138 (369)
                      .|++|..||......   .+   ....+..|+.-...+.+.    +.+. ..+.++++|-
T Consensus        97 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~isS  155 (260)
T 3un1_A           97 IDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQ-GSGHIVSITT  155 (260)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEEec
Confidence            999999999754221   22   234456676554444444    4443 3455666643

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=96.62  E-value=0.0099  Score=54.26  Aligned_cols=115  Identities=16%  Similarity=0.184  Sum_probs=68.6

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch---hHHHHhhcccCCCeEEEEe-CCCC---hhhhc------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP---GVTADISHMDTGAVVRGFL-GQPQ---LENAL------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~---g~~~dL~~~~~~~~v~~~~-~t~d---l~~al------   86 (369)
                      .++|.|+||+|++|..++..|+..+.  +|++.|.+...   ....++.... ..++..+. .-+|   +.+++      
T Consensus         4 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~   80 (260)
T 1x1t_A            4 GKVAVVTGSTSGIGLGIATALAAQGA--DIVLNGFGDAAEIEKVRAGLAAQH-GVKVLYDGADLSKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC--EEEEECCSCHHHHHHHHHHHHHHH-TSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHcCC--EEEEEeCCcchHHHHHHHHHHhcc-CCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            35899999999999999999999987  89999987622   1222232210 12333321 1123   22223      


Q ss_pred             -CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 017551           87 -TGMDLVIIPAGVPRKP---GMT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        87 -~~ADiVii~ag~p~k~---g~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                       ...|++|..||.....   ..+   ....+..|+.    +.+.+.+.+.+.. .+.|+++|.
T Consensus        81 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS  142 (260)
T 1x1t_A           81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIAS  142 (260)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECc
Confidence             3789999999975421   122   2344566665    4445555554443 466777754

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=96.61  E-value=0.0072  Score=55.34  Aligned_cols=114  Identities=15%  Similarity=0.162  Sum_probs=70.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEE-eCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLY-DVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~-D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al------   86 (369)
                      .+++.|+||+|++|..++..|+..|.  +|++. +.+..  .....++....  .++..+. .-+|   .++++      
T Consensus         8 ~k~vlVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (259)
T 3edm_A            8 NRTIVVAGAGRDIGRACAIRFAQEGA--NVVLTYNGAAEGAATAVAEIEKLG--RSALAIKADLTNAAEVEAAISAAADK   83 (259)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECSSCHHHHHHHHHHHTTT--SCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45899999999999999999999987  88888 44442  22233343321  2233221 1223   22223      


Q ss_pred             -CCCcEEEEcCCCC--CCC--CCCH---HHHHHHHHHHHHHHHHHHhhhC-CCeEEEEec
Q 017551           87 -TGMDLVIIPAGVP--RKP--GMTR---DDLFNINAGIVRTLCEGIAKCC-PNATVNLIS  137 (369)
Q Consensus        87 -~~ADiVii~ag~p--~k~--g~~r---~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t  137 (369)
                       ...|++|..||..  ..+  ..+.   ...+..|+.-...+.+.+..+- ..+.|+++|
T Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is  143 (259)
T 3edm_A           84 FGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFS  143 (259)
T ss_dssp             HCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred             hCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEc
Confidence             3789999998854  222  2222   4456778777777777776553 245676665

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=96.60  E-value=0.016  Score=53.23  Aligned_cols=115  Identities=15%  Similarity=0.243  Sum_probs=67.1

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc---hhHHHHhhcccCCCeEEEEe-CCCCh---hhhc-----
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL-GQPQL---ENAL-----   86 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~---~g~~~dL~~~~~~~~v~~~~-~t~dl---~~al-----   86 (369)
                      +.+.+.|+||+|++|..++..|+..+.  .|++.|.+..   ......+...  ..++..+. .-+|.   ++++     
T Consensus        24 ~~k~vlITGas~gIG~~~a~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~   99 (269)
T 3gk3_A           24 AKRVAFVTGGMGGLGAAISRRLHDAGM--AVAVSHSERNDHVSTWLMHERDA--GRDFKAYAVDVADFESCERCAEKVLA   99 (269)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHTTTC--EEEEEECSCHHHHHHHHHHHHTT--TCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCchHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            345788999999999999999999987  8999996552   1222222221  22333322 12332   2222     


Q ss_pred             --CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHH----HHhhhCCCeEEEEecC
Q 017551           87 --TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCE----GIAKCCPNATVNLISN  138 (369)
Q Consensus        87 --~~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i~~~i~~----~i~~~~p~a~viv~tN  138 (369)
                        ...|++|..||.....   ..+.   ...+..|+.....+.+    .+.+. ..+.|+++|-
T Consensus       100 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~iv~isS  162 (269)
T 3gk3_A          100 DFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVER-RFGRIVNIGS  162 (269)
T ss_dssp             HHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred             HcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEeCC
Confidence              3789999999875322   1232   3345566554444444    44333 3566777653

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=96.60  E-value=0.0093  Score=53.96  Aligned_cols=111  Identities=15%  Similarity=0.177  Sum_probs=66.1

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCChh------hhcCCCcEE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQLE------NALTGMDLV   92 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~dl~------~al~~ADiV   92 (369)
                      .++|.|+||+|++|..++..|+..+.  +|++.|.+....  .++.+.   .++..+. .-+|.+      +.+...|+|
T Consensus         6 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~--~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~id~l   78 (246)
T 2ag5_A            6 GKVIILTAAAQGIGQAAALAFAREGA--KVIATDINESKL--QELEKY---PGIQTRVLDVTKKKQIDQFANEVERLDVL   78 (246)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESCHHHH--GGGGGS---TTEEEEECCTTCHHHHHHHHHHCSCCSEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHH--HHHHhc---cCceEEEeeCCCHHHHHHHHHHhCCCCEE
Confidence            45899999999999999999999987  999999875211  111111   1222221 122321      224678999


Q ss_pred             EEcCCCCCCC---CCCH---HHHHHHHHHHHHHH----HHHHhhhCCCeEEEEecC
Q 017551           93 IIPAGVPRKP---GMTR---DDLFNINAGIVRTL----CEGIAKCCPNATVNLISN  138 (369)
Q Consensus        93 ii~ag~p~k~---g~~r---~~~~~~N~~i~~~i----~~~i~~~~p~a~viv~tN  138 (369)
                      |..||.....   ..+.   ...+..|+.-...+    .+.+.+. ..+.|+++|.
T Consensus        79 v~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~g~iv~isS  133 (246)
T 2ag5_A           79 FNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ-KSGNIINMSS  133 (246)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred             EECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEec
Confidence            9999875421   1222   33455665544444    4444433 3466777754

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=96.58  E-value=0.0091  Score=55.27  Aligned_cols=115  Identities=16%  Similarity=0.119  Sum_probs=67.7

Q ss_pred             CCEEEEEcCCCc--cHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------
Q 017551           20 GFKVAILGAAGG--IGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~--vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-------   86 (369)
                      .++|.|+||+|+  +|..++..|+..+.  +|++.|.+.......++.....  .+..+. .-+|   ..+.+       
T Consensus        26 ~k~vlVTGasg~~GIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (280)
T 3nrc_A           26 GKKILITGLLSNKSIAYGIAKAMHREGA--ELAFTYVGQFKDRVEKLCAEFN--PAAVLPCDVISDQEIKDLFVELGKVW  101 (280)
T ss_dssp             TCEEEECCCCSTTCHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHGGGC--CSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHcCC--EEEEeeCchHHHHHHHHHHhcC--CceEEEeecCCHHHHHHHHHHHHHHc
Confidence            468999999855  99999999999997  8999999863333333432221  122221 1122   22222       


Q ss_pred             CCCcEEEEcCCCCCCC---C-----CC---HHHHHHHHHHHHHHHHHHHhhhC--CCeEEEEecC
Q 017551           87 TGMDLVIIPAGVPRKP---G-----MT---RDDLFNINAGIVRTLCEGIAKCC--PNATVNLISN  138 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~---g-----~~---r~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tN  138 (369)
                      ...|++|..||.....   +     .+   ....+..|+.-...+.+.+..+-  ..+.|+++|.
T Consensus       102 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS  166 (280)
T 3nrc_A          102 DGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTY  166 (280)
T ss_dssp             SSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEEC
T ss_pred             CCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEec
Confidence            3569999999975421   1     22   23345666655555555544331  2466776654

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=96.56  E-value=0.0039  Score=57.64  Aligned_cols=112  Identities=9%  Similarity=0.114  Sum_probs=65.5

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCChh-------hhcCC
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQLE-------NALTG   88 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~dl~-------~al~~   88 (369)
                      ..+.++|.|+||+|+||..++..|+..|.  +|++.|.+.....     ..  ...+.... ...+..       +.+..
T Consensus        11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~-----~~--~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (269)
T 3vtz_A           11 EFTDKVAIVTGGSSGIGLAVVDALVRYGA--KVVSVSLDEKSDV-----NV--SDHFKIDVTNEEEVKEAVEKTTKKYGR   81 (269)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESCC--CT-----TS--SEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCchhcc-----Cc--eeEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            34457999999999999999999999997  8999998762110     00  00111100 001112       22348


Q ss_pred             CcEEEEcCCCCCCCC---CCH---HHHHHHHHHHH----HHHHHHHhhhCCCeEEEEecC
Q 017551           89 MDLVIIPAGVPRKPG---MTR---DDLFNINAGIV----RTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        89 ADiVii~ag~p~k~g---~~r---~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tN  138 (369)
                      .|++|..||......   .+.   ...+..|+.-.    +.+.+.+.+. ..+.|+++|-
T Consensus        82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS  140 (269)
T 3vtz_A           82 IDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAI-GHGSIINIAS  140 (269)
T ss_dssp             CCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEECc
Confidence            899999999754221   222   33455665544    4444444443 3566776653

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=96.56  E-value=0.018  Score=54.40  Aligned_cols=115  Identities=17%  Similarity=0.213  Sum_probs=68.3

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCC----------C--chhHHHHhhcccCCCeEEEEe-CCCCh---h
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV----------N--TPGVTADISHMDTGAVVRGFL-GQPQL---E   83 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~----------~--~~g~~~dL~~~~~~~~v~~~~-~t~dl---~   83 (369)
                      .+.+.|+||+|+||..++..|+..|.  +|++.|.+          .  ......++...  ..++..+. .-+|.   .
T Consensus        27 gk~vlVTGas~GIG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~  102 (322)
T 3qlj_A           27 GRVVIVTGAGGGIGRAHALAFAAEGA--RVVVNDIGVGLDGSPASGGSAAQSVVDEITAA--GGEAVADGSNVADWDQAA  102 (322)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC--EEEEECCCBCTTSSBTCTTSHHHHHHHHHHHT--TCEEEEECCCTTSHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCcccccccccccHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHH
Confidence            45789999999999999999999997  99999986          2  22233334332  23444332 12232   2


Q ss_pred             hhc-------CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHH----HhhhC-----CCeEEEEecC
Q 017551           84 NAL-------TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEG----IAKCC-----PNATVNLISN  138 (369)
Q Consensus        84 ~al-------~~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~~i~~~----i~~~~-----p~a~viv~tN  138 (369)
                      +.+       ...|++|..||.....   ..+   ....+..|+.-...+.+.    +.+..     +.+.||++|-
T Consensus       103 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS  179 (322)
T 3qlj_A          103 GLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSS  179 (322)
T ss_dssp             HHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECC
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcC
Confidence            223       2789999999975422   122   234556676544444443    33221     1367777753

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=96.56  E-value=0.024  Score=51.99  Aligned_cols=115  Identities=15%  Similarity=0.183  Sum_probs=66.4

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEe-CCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhhc------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYD-VVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D-~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al------   86 (369)
                      .++|.|+||+|++|..++..|+..+.  +|++.+ .+.  ......++...  ..++..+. .-+|   ..+++      
T Consensus        26 ~k~vlITGas~gIG~a~a~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~  101 (272)
T 4e3z_A           26 TPVVLVTGGSRGIGAAVCRLAARQGW--RVGVNYAANREAADAVVAAITES--GGEAVAIPGDVGNAADIAAMFSAVDRQ  101 (272)
T ss_dssp             SCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            45799999999999999999999997  887764 443  22222333322  23444332 1122   22222      


Q ss_pred             -CCCcEEEEcCCCCCCCC----CCH---HHHHHHHHHHHH----HHHHHHhhh--CCCeEEEEecC
Q 017551           87 -TGMDLVIIPAGVPRKPG----MTR---DDLFNINAGIVR----TLCEGIAKC--CPNATVNLISN  138 (369)
Q Consensus        87 -~~ADiVii~ag~p~k~g----~~r---~~~~~~N~~i~~----~i~~~i~~~--~p~a~viv~tN  138 (369)
                       ...|+||..||....++    .+.   ...+..|+.-..    .+.+.+.+.  ...+.|+++|-
T Consensus       102 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS  167 (272)
T 4e3z_A          102 FGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSS  167 (272)
T ss_dssp             HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECC
T ss_pred             CCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcc
Confidence             37799999999754322    222   344566654444    444444442  23566777653

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=96.55  E-value=0.0055  Score=55.89  Aligned_cols=118  Identities=14%  Similarity=0.077  Sum_probs=72.0

Q ss_pred             CCCCCEEEEEcCC--CccHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHhhcccCCCeEEEEe-CCCC---hhhhc---
Q 017551           17 GAAGFKVAILGAA--GGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL---   86 (369)
Q Consensus        17 ~~~~~KI~IiGA~--G~vGs~la~~l~~~~~~~el~L~D~~~-~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al---   86 (369)
                      ..+.++|.|+||+  |++|..++..|+..+.  +|++.|.+. ......++....  ..+..+. .-+|   ..+.+   
T Consensus        11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~   86 (271)
T 3ek2_A           11 FLDGKRILLTGLLSNRSIAYGIAKACKREGA--ELAFTYVGDRFKDRITEFAAEF--GSELVFPCDVADDAQIDALFASL   86 (271)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHHHT--TCCCEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC--CEEEEecchhhHHHHHHHHHHc--CCcEEEECCCCCHHHHHHHHHHH
Confidence            3456799999998  9999999999999997  999999876 222222332211  1112111 1122   22222   


Q ss_pred             ----CCCcEEEEcCCCCCC-----C--C-CC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 017551           87 ----TGMDLVIIPAGVPRK-----P--G-MT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  138 (369)
Q Consensus        87 ----~~ADiVii~ag~p~k-----~--g-~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN  138 (369)
                          ...|++|..||....     +  . .+   ....+..|+.....+.+.+..+. +.+.|+++|-
T Consensus        87 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS  154 (271)
T 3ek2_A           87 KTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSY  154 (271)
T ss_dssp             HHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred             HHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEec
Confidence                367999999987532     1  1 22   23456677776667777665543 3556776653

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=96.53  E-value=0.0087  Score=57.78  Aligned_cols=61  Identities=16%  Similarity=0.257  Sum_probs=47.7

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      ..++|+|||. |.||+.++..+...+.  +|..||.+....           .....   ..++++.+++||+|++..
T Consensus       170 ~gktiGIIGl-G~IG~~vA~~l~~~G~--~V~~~dr~~~~~-----------~~~~~---~~sl~ell~~aDvVil~v  230 (340)
T 4dgs_A          170 KGKRIGVLGL-GQIGRALASRAEAFGM--SVRYWNRSTLSG-----------VDWIA---HQSPVDLARDSDVLAVCV  230 (340)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTC--EEEEECSSCCTT-----------SCCEE---CSSHHHHHHTCSEEEECC
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEcCCcccc-----------cCcee---cCCHHHHHhcCCEEEEeC
Confidence            3579999999 9999999999997777  999999875320           01111   246889999999999984

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=96.53  E-value=0.025  Score=52.44  Aligned_cols=118  Identities=16%  Similarity=0.164  Sum_probs=75.0

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc---------hhHHHHhhcccCCCeEEEEe-CCCCh---hhh
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---------PGVTADISHMDTGAVVRGFL-GQPQL---ENA   85 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~---------~g~~~dL~~~~~~~~v~~~~-~t~dl---~~a   85 (369)
                      +.+.+.|+||+|++|..++..|+..+.  +|++.|.+..         .....++...  ..++..+. .-+|.   ++.
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~   83 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGA--NVALVAKSAEPHPKLPGTIYTAAKEIEEA--GGQALPIVGDIRDGDAVAAA   83 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTC--EEEEEESCCSCCSSSCCCHHHHHHHHHHH--TSEEEEEECCTTSHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECChhhhhhhhHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHH
Confidence            346899999999999999999999987  9999998762         1122233322  23444332 12232   222


Q ss_pred             c-------CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhhC---CCeEEEEecCCC
Q 017551           86 L-------TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKCC---PNATVNLISNPV  140 (369)
Q Consensus        86 l-------~~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tNPv  140 (369)
                      +       ...|++|..||.....   ..+.   ...+..|+.-...+.+.+...-   ..+.|+++|-..
T Consensus        84 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~  154 (285)
T 3sc4_A           84 VAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPI  154 (285)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCC
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChh
Confidence            3       3899999999975321   2232   3455678777777777666553   346778777544

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=96.52  E-value=0.018  Score=53.43  Aligned_cols=114  Identities=18%  Similarity=0.204  Sum_probs=68.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-------   86 (369)
                      .+.+.|+||+|+||..++..|+..|.  +|++.|.+.  ......++...  ..++..+. .-+|   ..+.+       
T Consensus         8 gk~vlVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (280)
T 3tox_A            8 GKIAIVTGASSGIGRAAALLFAREGA--KVVVTARNGNALAELTDEIAGG--GGEAAALAGDVGDEALHEALVELAVRRF   83 (280)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTC--EEEECCSCHHHHHHHHHHHTTT--TCCEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999997  899999986  23333334321  23333321 1122   22222       


Q ss_pred             CCCcEEEEcCCCCCC--C--CCCH---HHHHHHHHHHHHHH----HHHHhhhCCCeEEEEecC
Q 017551           87 TGMDLVIIPAGVPRK--P--GMTR---DDLFNINAGIVRTL----CEGIAKCCPNATVNLISN  138 (369)
Q Consensus        87 ~~ADiVii~ag~p~k--~--g~~r---~~~~~~N~~i~~~i----~~~i~~~~p~a~viv~tN  138 (369)
                      ...|++|..||....  +  ..+.   ...+..|+.-...+    .+.+.+. ..+.|+++|-
T Consensus        84 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS  145 (280)
T 3tox_A           84 GGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAAL-GGGSLTFTSS  145 (280)
T ss_dssp             SCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEcC
Confidence            378999999996422  1  1222   33456665544444    4444433 3566777654

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=96.52  E-value=0.024  Score=52.37  Aligned_cols=115  Identities=17%  Similarity=0.151  Sum_probs=65.4

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-------   86 (369)
                      .++|.|+||+|++|..++..|+..|.  +|+++|.+..  .....++.... ...+..+. .-+|   ..+++       
T Consensus        28 ~k~vlITGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  104 (286)
T 1xu9_A           28 GKKVIVTGASKGIGREMAYHLAKMGA--HVVVTARSKETLQKVVSHCLELG-AASAHYIAGTMEDMTFAEQFVAQAGKLM  104 (286)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHT-CSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHhC-CCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999987  8999999762  22222232211 12344332 1223   22222       


Q ss_pred             CCCcEEEEc-CCCCCCC--CCCH---HHHHHHHHHHHHHHHHHHhhhC--CCeEEEEec
Q 017551           87 TGMDLVIIP-AGVPRKP--GMTR---DDLFNINAGIVRTLCEGIAKCC--PNATVNLIS  137 (369)
Q Consensus        87 ~~ADiVii~-ag~p~k~--g~~r---~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~t  137 (369)
                      .+.|+||.. +|....+  ..+.   ...+..|+.....+.+.+..+.  ..+.|+++|
T Consensus       105 g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~is  163 (286)
T 1xu9_A          105 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVS  163 (286)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEEC
Confidence            379999998 6765332  1222   3345666554444444332211  134566654

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=96.51  E-value=0.0049  Score=56.42  Aligned_cols=115  Identities=11%  Similarity=0.107  Sum_probs=71.2

Q ss_pred             CCEEEEEcCC--CccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC-----
Q 017551           20 GFKVAILGAA--GGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFL-GQPQ---LENALT-----   87 (369)
Q Consensus        20 ~~KI~IiGA~--G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~-----   87 (369)
                      .++|.|+||+  |++|..++..|+..+.  +|++.|.+.. .....++....  ..+..+. .-+|   .+++++     
T Consensus         8 ~k~vlVTGas~~~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (261)
T 2wyu_A            8 GKKALVMGVTNQRSLGFAIAAKLKEAGA--EVALSYQAERLRPEAEKLAEAL--GGALLFRADVTQDEELDALFAGVKEA   83 (261)
T ss_dssp             TCEEEEESCCSSSSHHHHHHHHHHHHTC--EEEEEESCGGGHHHHHHHHHHT--TCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhc--CCcEEEECCCCCHHHHHHHHHHHHHH
Confidence            4589999998  8999999999999887  8999998762 22223332211  1122211 1223   223333     


Q ss_pred             --CCcEEEEcCCCCCC-----C--CCC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 017551           88 --GMDLVIIPAGVPRK-----P--GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  138 (369)
Q Consensus        88 --~ADiVii~ag~p~k-----~--g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN  138 (369)
                        +.|+||..||....     +  ..+   ....+..|+.-...+.+.+..+. ..+.|+++|-
T Consensus        84 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS  147 (261)
T 2wyu_A           84 FGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTY  147 (261)
T ss_dssp             HSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEEC
T ss_pred             cCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEec
Confidence              78999999997542     1  122   23456778777777777766542 2356777653

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=96.51  E-value=0.0029  Score=57.52  Aligned_cols=114  Identities=17%  Similarity=0.207  Sum_probs=64.4

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--h---HHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--G---VTADISHMDTGAVVRGFLGQPQLENALTGMDLVII   94 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g---~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii   94 (369)
                      .++|.|+||+|++|..++..|+..+.  +|++.|.+...  .   ...|+.+..   .+...  -....+.+...|++|.
T Consensus        15 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~D~~~~~---~~~~~--~~~~~~~~g~id~lv~   87 (247)
T 1uzm_A           15 SRSVLVTGGNRGIGLAIAQRLAADGH--KVAVTHRGSGAPKGLFGVEVDVTDSD---AVDRA--FTAVEEHQGPVEVLVS   87 (247)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSSCCCTTSEEEECCTTCHH---HHHHH--HHHHHHHHSSCSEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCChHHHHHhcCeeccCCCHH---HHHHH--HHHHHHHcCCCCEEEE
Confidence            46899999999999999999999987  89999987521  1   111111110   00000  0001122346799999


Q ss_pred             cCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCCC
Q 017551           95 PAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPV  140 (369)
Q Consensus        95 ~ag~p~k~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv  140 (369)
                      .||.....   ..+   ....+..|+.-...+.+.+..+   ...+.|+++|--.
T Consensus        88 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~  142 (247)
T 1uzm_A           88 NAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVS  142 (247)
T ss_dssp             ECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHh
Confidence            99875421   122   2344566655544444443322   2346677776543

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=96.50  E-value=0.011  Score=55.40  Aligned_cols=115  Identities=10%  Similarity=0.077  Sum_probs=70.7

Q ss_pred             CCEEEEEcCCCc--cHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc------
Q 017551           20 GFKVAILGAAGG--IGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFL-GQPQ---LENAL------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~--vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al------   86 (369)
                      .+++.|+||+|+  +|..++..|+..+.  +|++.|.++. .....++....  ..+..+. .-+|   .++.+      
T Consensus        31 gk~~lVTGasg~~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~  106 (293)
T 3grk_A           31 GKRGLILGVANNRSIAWGIAKAAREAGA--ELAFTYQGDALKKRVEPLAEEL--GAFVAGHCDVADAASIDAVFETLEKK  106 (293)
T ss_dssp             TCEEEEECCCSSSSHHHHHHHHHHHTTC--EEEEEECSHHHHHHHHHHHHHH--TCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEEcCCCCCcHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhc--CCceEEECCCCCHHHHHHHHHHHHHh
Confidence            468999999877  99999999999997  8999998752 22222232211  1222221 1122   22222      


Q ss_pred             -CCCcEEEEcCCCCC-----CC--CCC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 017551           87 -TGMDLVIIPAGVPR-----KP--GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  138 (369)
Q Consensus        87 -~~ADiVii~ag~p~-----k~--g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN  138 (369)
                       ...|++|..||...     .+  ..+   ....+..|+.-...+.+.+..+- ..+.|+++|-
T Consensus       107 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS  170 (293)
T 3grk_A          107 WGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTY  170 (293)
T ss_dssp             TSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred             cCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEee
Confidence             37899999999753     11  122   23456777766666666665543 3567777763

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=96.49  E-value=0.03  Score=52.25  Aligned_cols=118  Identities=16%  Similarity=0.122  Sum_probs=68.5

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCC-CcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCC---Chhhhc------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQP---QLENAL------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~-~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~---dl~~al------   86 (369)
                      .+++.|+||+|+||..++..|+..+. ...|++.|.+.  ......++.......++..+. .-+   +.++++      
T Consensus        33 ~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  112 (287)
T 3rku_A           33 KKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQE  112 (287)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCGG
T ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            35899999999999999999987663 34899999886  233333343321123333322 112   222223      


Q ss_pred             -CCCcEEEEcCCCCCCC----CCC---HHHHHHHHHHHHH----HHHHHHhhhCCCeEEEEecC
Q 017551           87 -TGMDLVIIPAGVPRKP----GMT---RDDLFNINAGIVR----TLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        87 -~~ADiVii~ag~p~k~----g~~---r~~~~~~N~~i~~----~i~~~i~~~~p~a~viv~tN  138 (369)
                       ...|++|..||.....    ..+   ....+..|+.-..    .+.+.+.+. ..+.||++|-
T Consensus       113 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~IV~isS  175 (287)
T 3rku_A          113 FKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAK-NSGDIVNLGS  175 (287)
T ss_dssp             GCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECC
T ss_pred             cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEECC
Confidence             3689999999965321    123   2344566655444    444444444 3456666653

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=96.49  E-value=0.03  Score=53.89  Aligned_cols=119  Identities=20%  Similarity=0.242  Sum_probs=73.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch---------hHHHHhhcccCCCeEEEEe-CCCCh---hhhc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP---------GVTADISHMDTGAVVRGFL-GQPQL---ENAL   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~---------g~~~dL~~~~~~~~v~~~~-~t~dl---~~al   86 (369)
                      .+.|.|+||+|+||..++..|+..+.  +|++.|.+...         ....++...  ..++..+. .-+|.   ++++
T Consensus        45 gk~vlVTGas~GIG~aia~~La~~Ga--~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~~  120 (346)
T 3kvo_A           45 GCTVFITGASRGIGKAIALKAAKDGA--NIVIAAKTAQPHPKLLGTIYTAAEEIEAV--GGKALPCIVDVRDEQQISAAV  120 (346)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHTTTC--EEEEEESCCSCCSSSCCCHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEeCCChHHHHHHHHHHHHCCC--EEEEEECChhhhhhhHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHH
Confidence            46899999999999999999999987  99999987621         222333322  23333332 12232   2222


Q ss_pred             -------CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCCCCC
Q 017551           87 -------TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNS  142 (369)
Q Consensus        87 -------~~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~  142 (369)
                             .+.|++|..||.....   ..+   ....+..|+.-...+.+.+..+   ...+.||++|-+...
T Consensus       121 ~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~  192 (346)
T 3kvo_A          121 EKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNL  192 (346)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCC
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHc
Confidence                   3899999999874321   122   2345677776665555555433   245678888766543

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=96.48  E-value=0.025  Score=51.41  Aligned_cols=114  Identities=12%  Similarity=0.057  Sum_probs=66.6

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT------   87 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~------   87 (369)
                      .+++.|+||+|++|..++..|+..+.  +|++.+.+..  .....++.... ..++..+. .-+|   ..++++      
T Consensus         7 ~k~vlVTGas~gIG~~~a~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   83 (264)
T 3i4f_A            7 VRHALITAGTKGLGKQVTEKLLAKGY--SVTVTYHSDTTAMETMKETYKDV-EERLQFVQADVTKKEDLHKIVEEAMSHF   83 (264)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHTGGG-GGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCEEEEeCCCchhHHHHHHHHHHCCC--EEEEEcCCChHHHHHHHHHHHhc-CCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            35799999999999999999999987  8999887652  11222222111 13344332 1223   223333      


Q ss_pred             -CCcEEEEcCCC--CC-CC--CCCH---HHHHHHHHHHHHHHHHH----HhhhCCCeEEEEec
Q 017551           88 -GMDLVIIPAGV--PR-KP--GMTR---DDLFNINAGIVRTLCEG----IAKCCPNATVNLIS  137 (369)
Q Consensus        88 -~ADiVii~ag~--p~-k~--g~~r---~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~t  137 (369)
                       ..|+||..||.  .. .+  ..+.   ...+..|+.....+.+.    +.+. ..+.++++|
T Consensus        84 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~is  145 (264)
T 3i4f_A           84 GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQ-NFGRIINYG  145 (264)
T ss_dssp             SCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEC
T ss_pred             CCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-CCCeEEEEe
Confidence             88999999983  21 11  1222   34456665554444444    4544 346666665

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=96.45  E-value=0.016  Score=54.17  Aligned_cols=115  Identities=13%  Similarity=0.089  Sum_probs=71.7

Q ss_pred             CCEEEEEcCCC--ccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc------
Q 017551           20 GFKVAILGAAG--GIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFL-GQPQ---LENAL------   86 (369)
Q Consensus        20 ~~KI~IiGA~G--~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al------   86 (369)
                      .+++.|+||+|  ++|..++..|+..|.  +|++.|.+.. .....++.....  .+..+. .-+|   .++++      
T Consensus        30 ~k~vlVTGasg~~GIG~~ia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~  105 (296)
T 3k31_A           30 GKKGVIIGVANDKSLAWGIAKAVCAQGA--EVALTYLSETFKKRVDPLAESLG--VKLTVPCDVSDAESVDNMFKVLAEE  105 (296)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHHHHT--CCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEEeCCCCCCHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhcC--CeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46899999976  999999999999997  8999999862 222222221111  111111 1122   22222      


Q ss_pred             -CCCcEEEEcCCCCCC-----C--CCC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 017551           87 -TGMDLVIIPAGVPRK-----P--GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  138 (369)
Q Consensus        87 -~~ADiVii~ag~p~k-----~--g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN  138 (369)
                       ...|++|..||+...     +  ..+   ....+..|+.-...+.+.+..+- ..+.|+++|-
T Consensus       106 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS  169 (296)
T 3k31_A          106 WGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSY  169 (296)
T ss_dssp             HSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred             cCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEe
Confidence             367999999997542     1  222   24456778777777777776654 3567777753

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=96.45  E-value=0.0038  Score=55.70  Aligned_cols=103  Identities=19%  Similarity=0.217  Sum_probs=68.3

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP   99 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p   99 (369)
                      .+++.|+||+|++|..++..|+..+.  +|++.|.+..    .|+.+...   +      ..+.+.+...|++|..||..
T Consensus         6 ~k~vlVTGas~gIG~~~a~~l~~~G~--~V~~~~r~~~----~D~~~~~~---v------~~~~~~~g~id~lv~nAg~~   70 (223)
T 3uce_A            6 KTVYVVLGGTSGIGAELAKQLESEHT--IVHVASRQTG----LDISDEKS---V------YHYFETIGAFDHLIVTAGSY   70 (223)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHCSTTE--EEEEESGGGT----CCTTCHHH---H------HHHHHHHCSEEEEEECCCCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEecCCcc----cCCCCHHH---H------HHHHHHhCCCCEEEECCCCC
Confidence            35789999999999999999998887  8999987642    33333210   0      01123346789999999864


Q ss_pred             CC--C--CCC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEec
Q 017551          100 RK--P--GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS  137 (369)
Q Consensus       100 ~k--~--g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t  137 (369)
                      ..  +  ..+   ....+..|+.-...+.+.+..+- +.+.|+++|
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~s  116 (223)
T 3uce_A           71 APAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTS  116 (223)
T ss_dssp             CCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred             CCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEec
Confidence            22  2  123   23456778777777777776553 345677765

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=96.42  E-value=0.013  Score=54.30  Aligned_cols=115  Identities=13%  Similarity=0.059  Sum_probs=70.7

Q ss_pred             CCEEEEEcCC--CccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc------
Q 017551           20 GFKVAILGAA--GGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFL-GQPQ---LENAL------   86 (369)
Q Consensus        20 ~~KI~IiGA~--G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al------   86 (369)
                      .++|.|+||+  |++|..++..|+..+.  +|++.|.+.. .....++.....  .+..+. .-+|   ..+++      
T Consensus        21 ~k~vlVTGas~~~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (285)
T 2p91_A           21 GKRALITGVANERSIAYGIAKSFHREGA--QLAFTYATPKLEKRVREIAKGFG--SDLVVKCDVSLDEDIKNLKKFLEEN   96 (285)
T ss_dssp             TCEEEECCCSSTTSHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3579999998  8999999999999987  8999998762 222233322111  111111 1122   22223      


Q ss_pred             -CCCcEEEEcCCCCCC-----C--CCC---HHHHHHHHHHHHHHHHHHHhhhC--CCeEEEEecC
Q 017551           87 -TGMDLVIIPAGVPRK-----P--GMT---RDDLFNINAGIVRTLCEGIAKCC--PNATVNLISN  138 (369)
Q Consensus        87 -~~ADiVii~ag~p~k-----~--g~~---r~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tN  138 (369)
                       ...|++|..||....     +  ..+   ....+..|+.-...+.+.+..+.  ..+.|+++|-
T Consensus        97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS  161 (285)
T 2p91_A           97 WGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSY  161 (285)
T ss_dssp             TSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEEC
T ss_pred             cCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEcc
Confidence             378999999997532     1  122   23456778777777777766543  2466777653

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=96.41  E-value=0.0044  Score=59.57  Aligned_cols=65  Identities=25%  Similarity=0.345  Sum_probs=48.8

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      ..++|+|||. |.||+.++..++..+.  +|..||.+.......++     .  +..    .++.+.+++||+|+++..
T Consensus       149 ~g~~vgIIG~-G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~-----g--~~~----~~l~~~l~~aDvVil~vp  213 (334)
T 2dbq_A          149 YGKTIGIIGL-GRIGQAIAKRAKGFNM--RILYYSRTRKEEVEREL-----N--AEF----KPLEDLLRESDFVVLAVP  213 (334)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSCCHHHHHHH-----C--CEE----CCHHHHHHHCSEEEECCC
T ss_pred             CCCEEEEEcc-CHHHHHHHHHHHhCCC--EEEEECCCcchhhHhhc-----C--ccc----CCHHHHHhhCCEEEECCC
Confidence            3579999999 9999999999998886  99999997633222111     1  121    257788999999999853

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=96.40  E-value=0.013  Score=54.66  Aligned_cols=35  Identities=17%  Similarity=0.093  Sum_probs=31.5

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEe-CCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYD-VVN   56 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D-~~~   56 (369)
                      .+++.|+||+|++|..++..|+..+.  +|++.| .+.
T Consensus         9 ~k~~lVTGas~GIG~aia~~la~~G~--~V~~~~~r~~   44 (291)
T 1e7w_A            9 VPVALVTGAAKRLGRSIAEGLHAEGY--AVCLHYHRSA   44 (291)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--eEEEEcCCCH
Confidence            35899999999999999999999997  899999 765

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=96.40  E-value=0.015  Score=53.54  Aligned_cols=115  Identities=15%  Similarity=0.137  Sum_probs=69.1

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHhhcccCCCeEEEEe-CCCCh---hhhc------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQL---ENAL------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~---~~g~~~dL~~~~~~~~v~~~~-~t~dl---~~al------   86 (369)
                      .+.+.|+||+|+||..++..|+..|.  +|++.+...   ......++...  ..++..+. .-+|.   ++.+      
T Consensus        27 ~k~~lVTGas~GIG~aia~~la~~G~--~Vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~  102 (267)
T 3u5t_A           27 NKVAIVTGASRGIGAAIAARLASDGF--TVVINYAGKAAAAEEVAGKIEAA--GGKALTAQADVSDPAAVRRLFATAEEA  102 (267)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHTC--EEEEEESSCSHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45799999999999999999999987  888875543   22223333322  12333221 12232   2222      


Q ss_pred             -CCCcEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 017551           87 -TGMDLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  138 (369)
Q Consensus        87 -~~ADiVii~ag~p~k-~--g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN  138 (369)
                       ...|++|..||.... +  ..+   ....+..|+.-...+.+.+..+- ..+.|+++|-
T Consensus       103 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS  162 (267)
T 3u5t_A          103 FGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMST  162 (267)
T ss_dssp             HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeC
Confidence             378999999997532 1  122   23455677766666666555442 3466777753

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=96.39  E-value=0.061  Score=49.48  Aligned_cols=113  Identities=16%  Similarity=0.218  Sum_probs=69.8

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCC---hhhh--cCCCcEEEE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENA--LTGMDLVII   94 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a--l~~ADiVii   94 (369)
                      +.+.|+||+++||..++..|+..|.  .|++.|++........+....  .+...+. .-+|   .++.  .-.-|++|.
T Consensus        10 KvalVTGas~GIG~aiA~~la~~Ga--~Vvi~~r~~~~~~~~~~~~~g--~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVN   85 (247)
T 4hp8_A           10 RKALVTGANTGLGQAIAVGLAAAGA--EVVCAARRAPDETLDIIAKDG--GNASALLIDFADPLAAKDSFTDAGFDILVN   85 (247)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCCHHHHHHHHHTT--CCEEEEECCTTSTTTTTTSSTTTCCCEEEE
T ss_pred             CEEEEeCcCCHHHHHHHHHHHHcCC--EEEEEeCCcHHHHHHHHHHhC--CcEEEEEccCCCHHHHHHHHHhCCCCEEEE
Confidence            4677889999999999999999998  999999986432222233221  2222221 1122   1111  234799999


Q ss_pred             cCCCCCC-C--CCC---HHHHHHHHHH----HHHHHHHHHhhhCCCeEEEEec
Q 017551           95 PAGVPRK-P--GMT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        95 ~ag~p~k-~--g~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      .||.... +  .++   ....+..|+.    ..+..++.+.+....+.||+++
T Consensus        86 NAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnis  138 (247)
T 4hp8_A           86 NAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIA  138 (247)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEEC
T ss_pred             CCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEe
Confidence            9997542 2  123   3344566654    4555666676666667788875

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=96.39  E-value=0.0069  Score=55.04  Aligned_cols=105  Identities=16%  Similarity=0.206  Sum_probs=63.5

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------CC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------TG   88 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-------~~   88 (369)
                      .++|.|+||+|++|..++..|+..+.  +|++.|.+...      ...  .  +..+. .-+|   +.+++       .+
T Consensus         7 ~k~vlVTGas~giG~~ia~~l~~~G~--~V~~~~r~~~~------~~~--~--~~~~~~D~~d~~~~~~~~~~~~~~~g~   74 (250)
T 2fwm_X            7 GKNVWVTGAGKGIGYATALAFVEAGA--KVTGFDQAFTQ------EQY--P--FATEVMDVADAAQVAQVCQRLLAETER   74 (250)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCCCS------SCC--S--SEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCchhh------hcC--C--ceEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            45899999999999999999999997  89999987521      000  0  11111 1122   22333       37


Q ss_pred             CcEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHH----HHHHHhhhCCCeEEEEec
Q 017551           89 MDLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRT----LCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        89 ADiVii~ag~p~k-~--g~~---r~~~~~~N~~i~~~----i~~~i~~~~p~a~viv~t  137 (369)
                      .|++|..||.... +  ..+   ....+..|+.-...    +.+.+.+.. .+.|+++|
T Consensus        75 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~is  132 (250)
T 2fwm_X           75 LDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQR-GGAIVTVA  132 (250)
T ss_dssp             CCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEEC
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcC-CCEEEEEC
Confidence            8999999987532 1  122   23445566554444    444445443 45566665

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=96.38  E-value=0.013  Score=53.34  Aligned_cols=117  Identities=17%  Similarity=0.141  Sum_probs=69.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHh---CCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCCh---hhhc----
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKI---NPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENAL----   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~---~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl---~~al----   86 (369)
                      .+.+.|+||+|++|..++..|+.   .+.  +|++.|.+.  ......++.......++..+. .-+|.   .+++    
T Consensus         6 ~k~~lVTGas~gIG~~ia~~l~~~~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (259)
T 1oaa_A            6 CAVCVLTGASRGFGRALAPQLARLLSPGS--VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR   83 (259)
T ss_dssp             SEEEEESSCSSHHHHHHHHHHHTTBCTTC--EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHhhcCCC--eEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHH
Confidence            35789999999999999999998   676  999999986  222333343211123343332 12232   1111    


Q ss_pred             C-----CCc--EEEEcCCCCCCCC------CC---HHHHHHHHHHHHHHHHHHHhhhC-----CCeEEEEecC
Q 017551           87 T-----GMD--LVIIPAGVPRKPG------MT---RDDLFNINAGIVRTLCEGIAKCC-----PNATVNLISN  138 (369)
Q Consensus        87 ~-----~AD--iVii~ag~p~k~g------~~---r~~~~~~N~~i~~~i~~~i~~~~-----p~a~viv~tN  138 (369)
                      +     ..|  ++|..||.....+      .+   ....+..|+.-...+.+.+..+.     ..+.|+++|-
T Consensus        84 ~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS  156 (259)
T 1oaa_A           84 ELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISS  156 (259)
T ss_dssp             HSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECC
T ss_pred             hccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcC
Confidence            1     347  9999999743211      23   23456778777666666665443     2356777754

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=96.37  E-value=0.026  Score=51.95  Aligned_cols=110  Identities=19%  Similarity=0.168  Sum_probs=64.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFL-GQPQ---LENAL-------   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-------   86 (369)
                      .+++.|+||+|++|..++..|+..+.  +|+++|.+...  ....++.      .+..+. .-+|   .++++       
T Consensus         9 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~------~~~~~~~Dv~d~~~v~~~~~~~~~~~   80 (270)
T 1yde_A            9 GKVVVVTGGGRGIGAGIVRAFVNSGA--RVVICDKDESGGRALEQELP------GAVFILCDVTQEDDVKTLVSETIRRF   80 (270)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHCT------TEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhc------CCeEEEcCCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999997  89999987622  1222221      122221 1122   22222       


Q ss_pred             CCCcEEEEcCCCCCCCC----CC---HHHHHHHHHHHHHHHHHHHhhhC--CCeEEEEec
Q 017551           87 TGMDLVIIPAGVPRKPG----MT---RDDLFNINAGIVRTLCEGIAKCC--PNATVNLIS  137 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~g----~~---r~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~t  137 (369)
                      ...|++|..||.....+    .+   ....+..|+.-...+.+.+..+.  ..+.|+++|
T Consensus        81 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~is  140 (270)
T 1yde_A           81 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINIS  140 (270)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEc
Confidence            37899999998743211    22   23455666555444444443211  135666665

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=96.36  E-value=0.0086  Score=55.92  Aligned_cols=79  Identities=15%  Similarity=0.156  Sum_probs=52.2

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEE-eCCCChhhhcCCCcEEEEc
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQLENALTGMDLVIIP   95 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~-~~t~dl~~al~~ADiVii~   95 (369)
                      +.+++.|+||+|++|..++..|+..+.  +|+++|.+.  ....+.++.......-+... +...++.++++++|+||.+
T Consensus       118 ~gk~vlVtGaaGGiG~aia~~L~~~G~--~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~  195 (287)
T 1lu9_A          118 KGKKAVVLAGTGPVGMRSAALLAGEGA--EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTA  195 (287)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEEC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcC--EEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEEC
Confidence            446899999779999999999999986  799999975  22233333321100111111 1112355678899999999


Q ss_pred             CCCC
Q 017551           96 AGVP   99 (369)
Q Consensus        96 ag~p   99 (369)
                      +|..
T Consensus       196 ag~g  199 (287)
T 1lu9_A          196 GAIG  199 (287)
T ss_dssp             CCTT
T ss_pred             CCcc
Confidence            8754

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=96.35  E-value=0.041  Score=50.64  Aligned_cols=121  Identities=17%  Similarity=0.188  Sum_probs=72.4

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc---------hhHHHHhhcccCCCeEEEEe-CCCCh---hhh
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---------PGVTADISHMDTGAVVRGFL-GQPQL---ENA   85 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~---------~g~~~dL~~~~~~~~v~~~~-~t~dl---~~a   85 (369)
                      +.+.+.|+||+|++|..++..|+..+.  +|++.|.+..         .....++...  ..++..+. .-+|.   .+.
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~   80 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGA--NVAIAAKSAVANPKLPGTIHSAAAAVNAA--GGQGLALKCDIREEDQVRAA   80 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCCSCCTTSCCCHHHHHHHHHHH--TSEEEEEECCTTCHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC--EEEEEeccchhhhhhHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHH
Confidence            346899999999999999999999997  8999998751         1122222221  23333332 12232   122


Q ss_pred             -------cCCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCCCCCh
Q 017551           86 -------LTGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNST  143 (369)
Q Consensus        86 -------l~~ADiVii~ag~p~k~g---~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~  143 (369)
                             +...|++|..||......   .+   ....+..|+.-...+.+.+..+   ...+.|+++|-.....
T Consensus        81 ~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  154 (274)
T 3e03_A           81 VAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLN  154 (274)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCC
T ss_pred             HHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcC
Confidence                   247899999999753221   22   2334566765554444444332   2456777777655443

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=96.33  E-value=0.011  Score=54.48  Aligned_cols=115  Identities=14%  Similarity=0.091  Sum_probs=71.4

Q ss_pred             CCEEEEEcCC--CccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc------
Q 017551           20 GFKVAILGAA--GGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFL-GQPQ---LENAL------   86 (369)
Q Consensus        20 ~~KI~IiGA~--G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al------   86 (369)
                      .++|.|+||+  |++|..++..|+..|.  +|++.|.+.. .....++.....  .+..+. .-+|   ..+++      
T Consensus         6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~   81 (275)
T 2pd4_A            6 GKKGLIVGVANNKSIAYGIAQSCFNQGA--TLAFTYLNESLEKRVRPIAQELN--SPYVYELDVSKEEHFKSLYNSVKKD   81 (275)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHTTTC--EEEEEESSTTTHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3589999998  8999999999999987  8999998762 222233322111  111111 1122   22222      


Q ss_pred             -CCCcEEEEcCCCCCC-----C--CCC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 017551           87 -TGMDLVIIPAGVPRK-----P--GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  138 (369)
Q Consensus        87 -~~ADiVii~ag~p~k-----~--g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN  138 (369)
                       ...|++|..||....     +  ..+   ....+..|+.....+.+.+..+- +.+.|+++|-
T Consensus        82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS  145 (275)
T 2pd4_A           82 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSY  145 (275)
T ss_dssp             TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred             cCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEec
Confidence             367999999997542     1  222   23456778777777777776553 2366777753

>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}

Probab=96.32  E-value=0.0074  Score=57.32  Aligned_cols=71  Identities=15%  Similarity=0.196  Sum_probs=48.9

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      ..++|+|||+ |.+|..++..|.......+|.+||.+....  .++.... ...+..   .+++++++++||+|+++.
T Consensus       134 ~~~~igiIG~-G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~--~~l~~~~-~~~~~~---~~~~~e~v~~aDiVi~at  204 (312)
T 2i99_A          134 SSEVLCILGA-GVQAYSHYEIFTEQFSFKEVRIWNRTKENA--EKFADTV-QGEVRV---CSSVQEAVAGADVIITVT  204 (312)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHHCCCSEEEEECSSHHHH--HHHHHHS-SSCCEE---CSSHHHHHTTCSEEEECC
T ss_pred             CCcEEEEECC-cHHHHHHHHHHHHhCCCcEEEEEcCCHHHH--HHHHHHh-hCCeEE---eCCHHHHHhcCCEEEEEe
Confidence            4579999999 999999998887652246899999976222  1222111 012332   356788999999999874

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=96.32  E-value=0.0033  Score=57.37  Aligned_cols=114  Identities=16%  Similarity=0.122  Sum_probs=66.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCC---hhhhc------CCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------TGM   89 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al------~~A   89 (369)
                      .+.+.|+||+|++|..++..|+..+.  +|++.|.+.. ....++.     ..+..+. .-+|   ..+++      ...
T Consensus         9 ~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~-~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~g~i   80 (257)
T 3tl3_A            9 DAVAVVTGGASGLGLATTKRLLDAGA--QVVVLDIRGE-DVVADLG-----DRARFAAADVTDEAAVASALDLAETMGTL   80 (257)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHHTC--EEEEEESSCH-HHHHHTC-----TTEEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCchH-HHHHhcC-----CceEEEECCCCCHHHHHHHHHHHHHhCCC
Confidence            45899999999999999999999987  9999998642 1222221     1222221 1122   22222      389


Q ss_pred             cEEEEcCCCCCCC------C-CC---HHHHHHHHHHHHHHHHHHHhhh-----------CCCeEEEEecCCCC
Q 017551           90 DLVIIPAGVPRKP------G-MT---RDDLFNINAGIVRTLCEGIAKC-----------CPNATVNLISNPVN  141 (369)
Q Consensus        90 DiVii~ag~p~k~------g-~~---r~~~~~~N~~i~~~i~~~i~~~-----------~p~a~viv~tNPv~  141 (369)
                      |++|..||.....      + .+   ....+..|+.-...+.+.+..+           ...+.|+++|--..
T Consensus        81 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  153 (257)
T 3tl3_A           81 RIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAA  153 (257)
T ss_dssp             EEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC-
T ss_pred             CEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhh
Confidence            9999999863210      1 22   2445566765544444444332           23567777765443

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=96.31  E-value=0.0038  Score=59.91  Aligned_cols=65  Identities=18%  Similarity=0.204  Sum_probs=47.6

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      ..++|+|||. |.||+.++..++..+.  +|..||.+......  ....    .+..   . ++.+.+++||+|++..
T Consensus       154 ~g~~vgIIG~-G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~~--~~~~----g~~~---~-~l~e~l~~aDvVi~~v  218 (330)
T 2gcg_A          154 TQSTVGIIGL-GRIGQAIARRLKPFGV--QRFLYTGRQPRPEE--AAEF----QAEF---V-STPELAAQSDFIVVAC  218 (330)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTC--CEEEEESSSCCHHH--HHTT----TCEE---C-CHHHHHHHCSEEEECC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCC--EEEEECCCCcchhH--HHhc----Ccee---C-CHHHHHhhCCEEEEeC
Confidence            3579999999 9999999999988777  89999987521111  1111    1221   2 5778899999999985

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=96.31  E-value=0.031  Score=51.68  Aligned_cols=115  Identities=16%  Similarity=0.214  Sum_probs=72.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC----------hhhhc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ----------LENAL   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d----------l~~al   86 (369)
                      .+.+.|+||+++||..++..|+..|.  .|++.|+++  +...+.++....  .++..+. .-+|          ..+.+
T Consensus         9 gKvalVTGas~GIG~aia~~la~~Ga--~Vvi~~~~~~~~~~~~~~l~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (255)
T 4g81_D            9 GKTALVTGSARGLGFAYAEGLAAAGA--RVILNDIRATLLAESVDTLTRKG--YDAHGVAFDVTDELAIEAAFSKLDAEG   84 (255)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC--EEEECCSCHHHHHHHHHHHHHTT--CCEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence            34778889999999999999999998  999999987  233334444321  2222221 1112          12234


Q ss_pred             CCCcEEEEcCCCCCC-C--CCC---HHHHHHHHH----HHHHHHHHHHhhhCCCeEEEEecC
Q 017551           87 TGMDLVIIPAGVPRK-P--GMT---RDDLFNINA----GIVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        87 ~~ADiVii~ag~p~k-~--g~~---r~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      -.-|++|..||.... +  ..+   ....+..|+    ...+.+++.+.+....+.||+++-
T Consensus        85 G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS  146 (255)
T 4g81_D           85 IHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGS  146 (255)
T ss_dssp             CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEee
Confidence            578999999987442 2  123   234455564    355666777766556677888863

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=96.30  E-value=0.07  Score=49.30  Aligned_cols=78  Identities=12%  Similarity=0.097  Sum_probs=50.5

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-ch--hHHHHhhcccCCCeEEEEe-CCCC----h---hhh---
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TP--GVTADISHMDTGAVVRGFL-GQPQ----L---ENA---   85 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-~~--g~~~dL~~~~~~~~v~~~~-~t~d----l---~~a---   85 (369)
                      .+++.|+||+|+||..++..|+..+.  +|++.|.+. ..  ....++... ...++..+. .-+|    .   .++   
T Consensus        23 ~k~~lVTGas~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~~l~~~-~~~~~~~~~~Dv~~~~~~~~~v~~~~~~   99 (288)
T 2x9g_A           23 APAAVVTGAAKRIGRAIAVKLHQTGY--RVVIHYHNSAEAAVSLADELNKE-RSNTAVVCQADLTNSNVLPASCEEIINS   99 (288)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHHTC--EEEEEESSCHHHHHHHHHHHHHH-STTCEEEEECCCSCSTTHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--eEEEEeCCchHHHHHHHHHHHhh-cCCceEEEEeecCCccCCHHHHHHHHHH
Confidence            46899999999999999999999887  899999986 22  222333211 112333321 1223    1   122   


Q ss_pred             ----cCCCcEEEEcCCCCC
Q 017551           86 ----LTGMDLVIIPAGVPR  100 (369)
Q Consensus        86 ----l~~ADiVii~ag~p~  100 (369)
                          +...|++|..||...
T Consensus       100 ~~~~~g~iD~lvnnAG~~~  118 (288)
T 2x9g_A          100 CFRAFGRCDVLVNNASAFY  118 (288)
T ss_dssp             HHHHHSCCCEEEECCCCCC
T ss_pred             HHHhcCCCCEEEECCCCCC
Confidence                237899999998743

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=96.30  E-value=0.0064  Score=56.13  Aligned_cols=35  Identities=23%  Similarity=0.423  Sum_probs=31.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      .+++.|+||+|++|..++..|+..+.  +|++.|.+.
T Consensus        30 ~k~vlVTGas~GIG~aia~~l~~~G~--~Vi~~~r~~   64 (281)
T 3ppi_A           30 GASAIVSGGAGGLGEATVRRLHADGL--GVVIADLAA   64 (281)
T ss_dssp             TEEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCh
Confidence            35789999999999999999999987  899999986

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=96.26  E-value=0.014  Score=58.01  Aligned_cols=92  Identities=16%  Similarity=0.134  Sum_probs=63.2

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhH-HHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV-TADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~-~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      -..++|+|+|. |.||..++..+...|.  +|..+|++..... +.+  .   ..  ..    .++++++++||+|+.+.
T Consensus       209 L~GktVgIiG~-G~IG~~vA~~Lka~Ga--~Viv~D~~p~~a~~A~~--~---G~--~~----~sL~eal~~ADVVilt~  274 (436)
T 3h9u_A          209 IAGKTACVCGY-GDVGKGCAAALRGFGA--RVVVTEVDPINALQAAM--E---GY--QV----LLVEDVVEEAHIFVTTT  274 (436)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHH--T---TC--EE----CCHHHHTTTCSEEEECS
T ss_pred             ccCCEEEEEee-CHHHHHHHHHHHHCCC--EEEEECCChhhhHHHHH--h---CC--ee----cCHHHHHhhCCEEEECC
Confidence            34579999999 9999999999998886  8999999863221 111  1   11  11    25789999999999875


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 017551           97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  140 (369)
Q Consensus        97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv  140 (369)
                      +...--+.                 +.++...|++++++++++.
T Consensus       275 gt~~iI~~-----------------e~l~~MK~gAIVINvgRg~  301 (436)
T 3h9u_A          275 GNDDIITS-----------------EHFPRMRDDAIVCNIGHFD  301 (436)
T ss_dssp             SCSCSBCT-----------------TTGGGCCTTEEEEECSSSG
T ss_pred             CCcCccCH-----------------HHHhhcCCCcEEEEeCCCC
Confidence            43211110                 2244445889999998775

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=96.25  E-value=0.11  Score=47.91  Aligned_cols=113  Identities=16%  Similarity=0.238  Sum_probs=72.5

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCCh----------hhhc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------ENAL   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl----------~~al   86 (369)
                      .+.+.|+||+++||..++..|+..|.  .|+++|+++  +...+.++....  .++..+. .-+|.          .+.+
T Consensus         7 gKvalVTGas~GIG~aiA~~la~~Ga--~Vv~~~~~~~~~~~~~~~i~~~g--~~~~~~~~Dvt~~~~v~~~~~~~~~~~   82 (254)
T 4fn4_A            7 NKVVIVTGAGSGIGRAIAKKFALNDS--IVVAVELLEDRLNQIVQELRGMG--KEVLGVKADVSKKKDVEEFVRRTFETY   82 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45788999999999999999999998  999999987  333444554322  2333221 11221          2335


Q ss_pred             CCCcEEEEcCCCC--CCC--CCCH---HHHHHHHH----HHHHHHHHHHhhhCCCeEEEEec
Q 017551           87 TGMDLVIIPAGVP--RKP--GMTR---DDLFNINA----GIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        87 ~~ADiVii~ag~p--~k~--g~~r---~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      -.-|++|..||+.  .++  ..+.   ...+..|+    -..+.+++.|.+.. .+.||+++
T Consensus        83 G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnis  143 (254)
T 4fn4_A           83 SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQG-KGVIVNTA  143 (254)
T ss_dssp             SCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEC
T ss_pred             CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEe
Confidence            6799999999963  333  2232   33455554    45566677776654 56677775

>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*

Probab=96.25  E-value=0.014  Score=56.44  Aligned_cols=73  Identities=19%  Similarity=0.341  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      ...+|+|||+ |.+|...+..+.....+.+|.++|.+.  +...+.++... ....+..   .+++++++++||+||++-
T Consensus       128 ~~~~v~iIGa-G~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~-~g~~~~~---~~~~~eav~~aDiVi~aT  202 (350)
T 1x7d_A          128 NARKMALIGN-GAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEY-SGLTIRR---ASSVAEAVKGVDIITTVT  202 (350)
T ss_dssp             TCCEEEEECC-STTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTC-TTCEEEE---CSSHHHHHTTCSEEEECC
T ss_pred             cCCeEEEECC-cHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhc-cCceEEE---eCCHHHHHhcCCEEEEec
Confidence            4569999999 999999887765433456999999986  23333334321 1122332   357889999999999974

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=96.23  E-value=0.024  Score=53.87  Aligned_cols=35  Identities=17%  Similarity=0.093  Sum_probs=31.4

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEe-CCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYD-VVN   56 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D-~~~   56 (369)
                      .+.+.|+||+|+||..++..|+..+.  +|++.| .+.
T Consensus        46 ~k~~lVTGas~GIG~aia~~La~~G~--~Vv~~~~r~~   81 (328)
T 2qhx_A           46 VPVALVTGAAKRLGRSIAEGLHAEGY--AVCLHYHRSA   81 (328)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEcCCCH
Confidence            35799999999999999999999997  899999 765

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=96.20  E-value=0.05  Score=49.79  Aligned_cols=116  Identities=18%  Similarity=0.185  Sum_probs=72.9

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-----chhHHHHhhcccCCCeEEEEe-CCCCh---hhhc---
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-----TPGVTADISHMDTGAVVRGFL-GQPQL---ENAL---   86 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-----~~g~~~dL~~~~~~~~v~~~~-~t~dl---~~al---   86 (369)
                      +.+.+.|+||+|++|..++..|+..|.  +|++.|...     ......++...  ..++..+. .-+|.   ++.+   
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~   85 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESV--NLVLHYHQAKDSDTANKLKDELEDQ--GAKVALYQSDLSNEEEVAKLFDFA   85 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSC--EEEEEESCGGGHHHHHHHHHHHHTT--TCEEEEEECCCCSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEecCccCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHH
Confidence            346899999999999999999999987  899988754     12223334332  23444332 12232   2222   


Q ss_pred             ----CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 017551           87 ----TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  138 (369)
Q Consensus        87 ----~~ADiVii~ag~p~k~g---~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN  138 (369)
                          ...|++|..||......   .+   ....+..|+.....+.+.+..+- +.+.|++++-
T Consensus        86 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS  148 (262)
T 3ksu_A           86 EKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIAT  148 (262)
T ss_dssp             HHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECC
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEec
Confidence                37899999999754221   22   23456678777777777766543 3566777654

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=96.18  E-value=0.0084  Score=57.99  Aligned_cols=66  Identities=20%  Similarity=0.207  Sum_probs=48.5

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHH-hCCCCcEEEEEeCCCc-hhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMK-INPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP   95 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~-~~~~~~el~L~D~~~~-~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~   95 (369)
                      -..++|+|||. |.||+.++..++ ..+.  +|..||.+.. .....++       .+..   .+++++.+++||+|++.
T Consensus       161 l~g~~vgIIG~-G~IG~~vA~~l~~~~G~--~V~~~d~~~~~~~~~~~~-------g~~~---~~~l~ell~~aDvVil~  227 (348)
T 2w2k_A          161 PRGHVLGAVGL-GAIQKEIARKAVHGLGM--KLVYYDVAPADAETEKAL-------GAER---VDSLEELARRSDCVSVS  227 (348)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCC--EEEEECSSCCCHHHHHHH-------TCEE---CSSHHHHHHHCSEEEEC
T ss_pred             CCCCEEEEEEE-CHHHHHHHHHHHHhcCC--EEEEECCCCcchhhHhhc-------CcEE---eCCHHHHhccCCEEEEe
Confidence            34579999999 999999999998 7776  9999998762 2112111       1121   23677889999999998


Q ss_pred             C
Q 017551           96 A   96 (369)
Q Consensus        96 a   96 (369)
                      .
T Consensus       228 v  228 (348)
T 2w2k_A          228 V  228 (348)
T ss_dssp             C
T ss_pred             C
Confidence            5

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=96.17  E-value=0.012  Score=54.94  Aligned_cols=152  Identities=16%  Similarity=0.145  Sum_probs=82.4

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEE-EEeCCCchhHHHHhhcccC--CCeEEEEeCCCChhhhcCCCcEEEE
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLH-LYDVVNTPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVII   94 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~-L~D~~~~~g~~~dL~~~~~--~~~v~~~~~t~dl~~al~~ADiVii   94 (369)
                      .+++||+|+|++|.+|+.++..+...+-. +|+ .+|.+.......|+.....  ...+..   ++|+++.++++|+||.
T Consensus         3 ~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~-elva~~d~~~~~~~g~d~~~~~g~~~~~v~~---~~dl~~~l~~~DvVID   78 (273)
T 1dih_A            3 DANIRVAIAGAGGRMGRQLIQAALALEGV-QLGAALEREGSSLLGSDAGELAGAGKTGVTV---QSSLDAVKDDFDVFID   78 (273)
T ss_dssp             CCBEEEEETTTTSHHHHHHHHHHHHSTTE-ECCCEECCTTCTTCSCCTTCSSSSSCCSCCE---ESCSTTTTTSCSEEEE
T ss_pred             CCCcEEEEECCCCHHHHHHHHHHHhCCCC-EEEEEEecCchhhhhhhHHHHcCCCcCCcee---cCCHHHHhcCCCEEEE
Confidence            35689999999999999999887765422 555 8887652111122222110  112222   2467778889999995


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEec-hhc---H
Q 017551           95 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLD---V  170 (369)
Q Consensus        95 ~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t-~Ld---~  170 (369)
                      .. .|               ....+++..+.+..-+   +++..| +....-. +.+.....- ...++... .+-   .
T Consensus        79 ft-~p---------------~~~~~~~~~a~~~G~~---vVigTt-G~~~e~~-~~L~~~a~~-~~vv~a~N~siGvn~~  136 (273)
T 1dih_A           79 FT-RP---------------EGTLNHLAFCRQHGKG---MVIGTT-GFDEAGK-QAIRDAAAD-IAIVFAANFSVGVNVM  136 (273)
T ss_dssp             CS-CH---------------HHHHHHHHHHHHTTCE---EEECCC-CCCHHHH-HHHHHHTTT-SCEEECSCCCHHHHHH
T ss_pred             cC-Ch---------------HHHHHHHHHHHhCCCC---EEEECC-CCCHHHH-HHHHHhcCC-CCEEEEecCcHHHHHH
Confidence            43 11               1234445555544422   445555 3322222 233333211 11233221 111   2


Q ss_pred             HHHHHHHHHHhCCCCCCCceeEEeecCC
Q 017551          171 VRANTFVAEVLGLDPRDVDVPVVGGHAG  198 (369)
Q Consensus       171 ~R~~~~la~~lgv~~~~V~~~viG~hg~  198 (369)
                      .++-...|+.|+   ++.++-|+--|..
T Consensus       137 ~~l~~~aa~~~~---~~~dieiiE~Hh~  161 (273)
T 1dih_A          137 LKLLEKAAKVMG---DYTDIEIIEAHHR  161 (273)
T ss_dssp             HHHHHHHHHHHT---TTSEEEEEEEECT
T ss_pred             HHHHHHHHHhcC---CCCCEEEEEeecC
Confidence            456677888886   4677788888876

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=96.17  E-value=0.087  Score=48.33  Aligned_cols=110  Identities=17%  Similarity=0.110  Sum_probs=65.5

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------CC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------TG   88 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-------~~   88 (369)
                      .+++.|+||+|+||..++..|+..|.  +|++.|.+....  .++..    ..+..+. .-+|   .++++       ..
T Consensus        16 ~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~--~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   87 (266)
T 3p19_A           16 KKLVVITGASSGIGEAIARRFSEEGH--PLLLLARRVERL--KALNL----PNTLCAQVDVTDKYTFDTAITRAEKIYGP   87 (266)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC--CEEEEESCHHHH--HTTCC----TTEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCHHHH--HHhhc----CCceEEEecCCCHHHHHHHHHHHHHHCCC
Confidence            35799999999999999999999997  899999875211  11111    1222211 1122   22223       37


Q ss_pred             CcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHH----HHHHHhhhCCCeEEEEecC
Q 017551           89 MDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRT----LCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        89 ADiVii~ag~p~k~---g~~r---~~~~~~N~~i~~~----i~~~i~~~~p~a~viv~tN  138 (369)
                      .|++|..||.....   ..+.   ...+..|+.-...    +.+.+.+.. .+.||++|-
T Consensus        88 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~IV~isS  146 (266)
T 3p19_A           88 ADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARN-CGTIINISS  146 (266)
T ss_dssp             EEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECC
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcC
Confidence            89999999975322   1222   3345666554444    555555443 455666653

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=96.17  E-value=0.0088  Score=58.01  Aligned_cols=95  Identities=23%  Similarity=0.291  Sum_probs=61.8

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      -..++|+|||. |.||+.++..+...+.  +|..||.+. ....+.++.       +..   ..++++.+++||+|++..
T Consensus       162 l~gktvGIIG~-G~IG~~vA~~l~~~G~--~V~~~dr~~~~~~~~~~~g-------~~~---~~~l~ell~~aDvV~l~~  228 (351)
T 3jtm_A          162 LEGKTIGTVGA-GRIGKLLLQRLKPFGC--NLLYHDRLQMAPELEKETG-------AKF---VEDLNEMLPKCDVIVINM  228 (351)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHGGGCC--EEEEECSSCCCHHHHHHHC-------CEE---CSCHHHHGGGCSEEEECS
T ss_pred             ccCCEEeEEEe-CHHHHHHHHHHHHCCC--EEEEeCCCccCHHHHHhCC-------CeE---cCCHHHHHhcCCEEEECC
Confidence            34579999999 9999999999987777  899999875 222222221       121   246889999999999985


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 017551           97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                        |..+. ++. ++  |    .+   .+...-|++++|+++.
T Consensus       229 --Plt~~-t~~-li--~----~~---~l~~mk~gailIN~aR  257 (351)
T 3jtm_A          229 --PLTEK-TRG-MF--N----KE---LIGKLKKGVLIVNNAR  257 (351)
T ss_dssp             --CCCTT-TTT-CB--S----HH---HHHHSCTTEEEEECSC
T ss_pred             --CCCHH-HHH-hh--c----HH---HHhcCCCCCEEEECcC
Confidence              32221 110 11  1    12   2333348899999863

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.14  E-value=0.015  Score=53.32  Aligned_cols=75  Identities=17%  Similarity=0.243  Sum_probs=49.4

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-------------------chhH--HHHhhcccCCCeEEEEeC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-------------------TPGV--TADISHMDTGAVVRGFLG   78 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-------------------~~g~--~~dL~~~~~~~~v~~~~~   78 (369)
                      ..||+|+|+ |.+|+.++..|+..|. .+|.|+|.+.                   .+..  +..+.+......+..+..
T Consensus        31 ~~~VlVvG~-Gg~G~~va~~La~~Gv-~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~  108 (249)
T 1jw9_B           31 DSRVLIVGL-GGLGCAASQYLASAGV-GNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNA  108 (249)
T ss_dssp             HCEEEEECC-SHHHHHHHHHHHHHTC-SEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred             CCeEEEEee-CHHHHHHHHHHHHcCC-CeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEec
Confidence            359999999 9999999999998874 5999999885                   1221  122333221234444321


Q ss_pred             C---CChhhhcCCCcEEEEcC
Q 017551           79 Q---PQLENALTGMDLVIIPA   96 (369)
Q Consensus        79 t---~dl~~al~~ADiVii~a   96 (369)
                      .   .++.+.++++|+||.+.
T Consensus       109 ~~~~~~~~~~~~~~DvVi~~~  129 (249)
T 1jw9_B          109 LLDDAELAALIAEHDLVLDCT  129 (249)
T ss_dssp             CCCHHHHHHHHHTSSEEEECC
T ss_pred             cCCHhHHHHHHhCCCEEEEeC
Confidence            1   12345678999999884

>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}

Probab=95.14  E-value=0.00088  Score=59.78  Aligned_cols=65  Identities=14%  Similarity=0.141  Sum_probs=46.4

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      ...+||+|||+ |.+|+.++..|...+.  +|.++|.+..   ...+..    ..+..   . ++.++++++|+||++.
T Consensus        17 ~~~~~I~iIG~-G~mG~~la~~L~~~G~--~V~~~~r~~~---~~~~~~----~g~~~---~-~~~~~~~~aDvVilav   81 (201)
T 2yjz_A           17 EKQGVVCIFGT-GDFGKSLGLKMLQCGY--SVVFGSRNPQ---VSSLLP----RGAEV---L-CYSEAASRSDVIVLAV   81 (201)
Confidence            44579999999 9999999999988776  8899998642   111211    11221   2 4567889999999984

>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6

Probab=96.10  E-value=0.002  Score=59.87  Aligned_cols=63  Identities=11%  Similarity=0.153  Sum_probs=37.3

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEE-EEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVL-HLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el-~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      |||+|||+ |.+|+.++..|... .  +| .++|.+....  ..+.... ..   .   +++++++++++|+||++.
T Consensus         3 m~I~iIG~-G~mG~~la~~l~~~-~--~v~~v~~~~~~~~--~~~~~~~-g~---~---~~~~~~~~~~~DvVilav   66 (276)
T 2i76_A            3 LVLNFVGT-GTLTRFFLECLKDR-Y--EIGYILSRSIDRA--RNLAEVY-GG---K---AATLEKHPELNGVVFVIV   66 (276)
T ss_dssp             -CCEEESC-CHHHHHHHHTTC-------CCCEECSSHHHH--HHHHHHT-CC---C---CCSSCCCCC---CEEECS
T ss_pred             ceEEEEeC-CHHHHHHHHHHHHc-C--cEEEEEeCCHHHH--HHHHHHc-CC---c---cCCHHHHHhcCCEEEEeC
Confidence            68999999 99999999888766 4  77 5899875221  1122111 11   1   245566789999999984

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=96.09  E-value=0.056  Score=51.23  Aligned_cols=113  Identities=18%  Similarity=0.232  Sum_probs=66.4

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCC---------C--chhHHHHhhcccCCCeEEEE-eCCCChhh---
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV---------N--TPGVTADISHMDTGAVVRGF-LGQPQLEN---   84 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~---------~--~~g~~~dL~~~~~~~~v~~~-~~t~dl~~---   84 (369)
                      .+.+.|+||+|+||..++..|+..|.  +|++.|..         .  ......++....  ..+... +...+..+   
T Consensus         9 gk~~lVTGas~GIG~~~a~~La~~Ga--~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~--~~~~~D~~~~~~~~~~~~   84 (319)
T 1gz6_A            9 GRVVLVTGAGGGLGRAYALAFAERGA--LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG--GKAVANYDSVEAGEKLVK   84 (319)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC--EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTT--CEEEEECCCGGGHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEcCCcccccccCCHHHHHHHHHHHHhhC--CeEEEeCCCHHHHHHHHH
Confidence            46899999999999999999999987  99998863         2  122223343211  122221 11112212   


Q ss_pred             ----hcCCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHH----HHHHHHHhhhCCCeEEEEec
Q 017551           85 ----ALTGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIV----RTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        85 ----al~~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~t  137 (369)
                          .+...|++|..||+....   ..+.   ...+..|+.-.    +.+.+.+.+. ..+.||++|
T Consensus        85 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~grIV~vs  150 (319)
T 1gz6_A           85 TALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ-NYGRIIMTA  150 (319)
T ss_dssp             HHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEEEEEC
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEC
Confidence                234789999999975432   1232   33456666554    4444444444 346677665

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.06  E-value=0.032  Score=52.28  Aligned_cols=97  Identities=21%  Similarity=0.220  Sum_probs=63.9

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      -+.++|.|||+ |.+|+.++..+...+.  +|..+|.+.....  .+...  ....  .. ..++++.++++|+|+++. 
T Consensus       153 l~g~~v~IiG~-G~iG~~~a~~l~~~G~--~V~~~dr~~~~~~--~~~~~--g~~~--~~-~~~l~~~l~~aDvVi~~~-  221 (293)
T 3d4o_A          153 IHGANVAVLGL-GRVGMSVARKFAALGA--KVKVGARESDLLA--RIAEM--GMEP--FH-ISKAAQELRDVDVCINTI-  221 (293)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESSHHHHH--HHHHT--TSEE--EE-GGGHHHHTTTCSEEEECC-
T ss_pred             CCCCEEEEEee-CHHHHHHHHHHHhCCC--EEEEEECCHHHHH--HHHHC--CCee--cC-hhhHHHHhcCCCEEEECC-
Confidence            34579999999 9999999999988886  9999998752211  11111  1221  11 245778899999999985 


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec-CCCCC
Q 017551           98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS-NPVNS  142 (369)
Q Consensus        98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t-NPv~~  142 (369)
                       |.  ++-       |.       +.+....|.+++++++ +|.++
T Consensus       222 -p~--~~i-------~~-------~~l~~mk~~~~lin~ar~~~~~  250 (293)
T 3d4o_A          222 -PA--LVV-------TA-------NVLAEMPSHTFVIDLASKPGGT  250 (293)
T ss_dssp             -SS--CCB-------CH-------HHHHHSCTTCEEEECSSTTCSB
T ss_pred             -Ch--HHh-------CH-------HHHHhcCCCCEEEEecCCCCCC
Confidence             21  211       11       1223334788999987 77765

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=96.05  E-value=0.0064  Score=54.97  Aligned_cols=104  Identities=17%  Similarity=0.267  Sum_probs=65.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHh-CCCCcEEEEEeCCCc-hhH-----HHHhhcccCCCeEEEEeCCCChhhhc-----C
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKI-NPLVSVLHLYDVVNT-PGV-----TADISHMDTGAVVRGFLGQPQLENAL-----T   87 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~-~~~~~el~L~D~~~~-~g~-----~~dL~~~~~~~~v~~~~~t~dl~~al-----~   87 (369)
                      .+++.|+||+|++|..++..|+. .+.  .|++.|.+.. ...     ..|+.+            ..+..+.+     .
T Consensus         4 ~k~vlITGas~gIG~~~a~~l~~~~g~--~v~~~~~~~~~~~~~~~~~~~Dv~~------------~~~v~~~~~~~~~~   69 (244)
T 4e4y_A            4 MANYLVTGGSKGIGKAVVELLLQNKNH--TVINIDIQQSFSAENLKFIKADLTK------------QQDITNVLDIIKNV   69 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTSTTE--EEEEEESSCCCCCTTEEEEECCTTC------------HHHHHHHHHHTTTC
T ss_pred             CCeEEEeCCCChHHHHHHHHHHhcCCc--EEEEeccccccccccceEEecCcCC------------HHHHHHHHHHHHhC
Confidence            45799999999999999999988 566  8889998752 110     011111            11122222     2


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEec
Q 017551           88 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS  137 (369)
Q Consensus        88 ~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t  137 (369)
                      ..|++|..||.....   ..+   ....+..|+.-...+.+.+..+- ..+.|+++|
T Consensus        70 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~s  126 (244)
T 4e4y_A           70 SFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNG  126 (244)
T ss_dssp             CEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEEC
T ss_pred             CCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEEC
Confidence            789999999974321   223   24456778877777777766553 235666664

>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}

Probab=96.04  E-value=0.011  Score=56.47  Aligned_cols=71  Identities=17%  Similarity=0.227  Sum_probs=51.6

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      ..+|+|||+ |.+|...+..|.....+.+|.++|++.+...+.++.... ...+..   . ++++++++||+||.+-
T Consensus       121 ~~~v~iIGa-G~~a~~~~~al~~~~~~~~V~v~~r~~a~~la~~l~~~~-g~~~~~---~-~~~eav~~aDIVi~aT  191 (313)
T 3hdj_A          121 SSVLGLFGA-GTQGAEHAAQLSARFALEAILVHDPYASPEILERIGRRC-GVPARM---A-APADIAAQADIVVTAT  191 (313)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHSCCCEEEEECTTCCHHHHHHHHHHH-TSCEEE---C-CHHHHHHHCSEEEECC
T ss_pred             CcEEEEECc-cHHHHHHHHHHHHhCCCcEEEEECCcHHHHHHHHHHHhc-CCeEEE---e-CHHHHHhhCCEEEEcc
Confidence            469999999 999999988877643477999999984344445554321 223332   3 6789999999999874

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.04  E-value=0.021  Score=53.57  Aligned_cols=76  Identities=21%  Similarity=0.273  Sum_probs=53.0

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP   95 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~   95 (369)
                      -+..++.|+|| |.+|..++..|+..+. .+|+++|++..  ...+.++........+.... ..++.++++++|+||.+
T Consensus       125 l~~k~vlVlGa-GG~g~aia~~L~~~G~-~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~-~~~l~~~l~~~DiVIna  201 (283)
T 3jyo_A          125 AKLDSVVQVGA-GGVGNAVAYALVTHGV-QKLQVADLDTSRAQALADVINNAVGREAVVGVD-ARGIEDVIAAADGVVNA  201 (283)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTC-SEEEEECSSHHHHHHHHHHHHHHHTSCCEEEEC-STTHHHHHHHSSEEEEC
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHhhcCCceEEEcC-HHHHHHHHhcCCEEEEC
Confidence            34569999999 9999999999998764 47999999863  33334444321122344332 34777888999999997


Q ss_pred             C
Q 017551           96 A   96 (369)
Q Consensus        96 a   96 (369)
                      -
T Consensus       202 T  202 (283)
T 3jyo_A          202 T  202 (283)
T ss_dssp             S
T ss_pred             C
Confidence            4

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=96.02  E-value=0.017  Score=55.88  Aligned_cols=65  Identities=25%  Similarity=0.377  Sum_probs=48.2

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      +.++|+|||. |.||+.++..+...+.  +|..||.+.......++.       +..   ..++++.++.||+|++..
T Consensus       167 ~g~tvGIIG~-G~IG~~vA~~l~~~G~--~V~~~d~~~~~~~~~~~g-------~~~---~~~l~ell~~aDvV~l~~  231 (347)
T 1mx3_A          167 RGETLGIIGL-GRVGQAVALRAKAFGF--NVLFYDPYLSDGVERALG-------LQR---VSTLQDLLFHSDCVTLHC  231 (347)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTC--EEEEECTTSCTTHHHHHT-------CEE---CSSHHHHHHHCSEEEECC
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHHCCC--EEEEECCCcchhhHhhcC-------Cee---cCCHHHHHhcCCEEEEcC
Confidence            4579999999 9999999999987776  999999875332222111       111   235778899999999974

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=96.02  E-value=0.0027  Score=58.72  Aligned_cols=111  Identities=19%  Similarity=0.278  Sum_probs=64.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhH-----HHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV-----TADISHMDTGAVVRGFLGQPQLENALTGMDLVII   94 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~-----~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii   94 (369)
                      .+++.|+||+|++|..++..|+..|.  +|++.|.+.....     ..|+.+..   .+...  -....+.+...|++|.
T Consensus        28 gk~vlVTGas~gIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~Dv~~~~---~~~~~--~~~~~~~~g~iD~lvn  100 (266)
T 3uxy_A           28 GKVALVTGAAGGIGGAVVTALRAAGA--RVAVADRAVAGIAADLHLPGDLREAA---YADGL--PGAVAAGLGRLDIVVN  100 (266)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTC--EEEECSSCCTTSCCSEECCCCTTSHH---HHHHH--HHHHHHHHSCCCEEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHhhhccCcCCCCHH---HHHHH--HHHHHHhcCCCCEEEE
Confidence            45899999999999999999999997  8999998752110     01111100   00000  0011233458999999


Q ss_pred             cCCCCCCC---CCC---HHHHHHHHHHHHHHHHHH----HhhhCCCeEEEEecC
Q 017551           95 PAGVPRKP---GMT---RDDLFNINAGIVRTLCEG----IAKCCPNATVNLISN  138 (369)
Q Consensus        95 ~ag~p~k~---g~~---r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tN  138 (369)
                      .||.....   ..+   ....+..|+.-...+.+.    +.+. ..+.|+++|-
T Consensus       101 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~isS  153 (266)
T 3uxy_A          101 NAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAA-GGGAIVNVAS  153 (266)
T ss_dssp             CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECC
Confidence            99975421   122   233455665544444444    4544 3566777754

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=96.00  E-value=0.0079  Score=55.84  Aligned_cols=35  Identities=23%  Similarity=0.277  Sum_probs=32.0

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      .+++.|+||+|+||..++..|+..+.  +|++.|.+.
T Consensus         5 gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~   39 (281)
T 3zv4_A            5 GEVALITGGASGLGRALVDRFVAEGA--RVAVLDKSA   39 (281)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcC--EEEEEeCCH
Confidence            45899999999999999999999997  999999876

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=96.00  E-value=0.0078  Score=54.87  Aligned_cols=112  Identities=15%  Similarity=0.152  Sum_probs=64.9

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------C
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------T   87 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-------~   87 (369)
                      +++.|+||+|++|..++..|+..+....|++.|.+..  .....++.     .++..+. .-+|   .++.+       .
T Consensus         3 k~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   77 (254)
T 3kzv_A            3 KVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYG-----DRFFYVVGDITEDSVLKQLVNAAVKGHG   77 (254)
T ss_dssp             CEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHG-----GGEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhC-----CceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4789999999999999999988764348888998762  22222221     1222221 1122   22222       3


Q ss_pred             CCcEEEEcCCCCC--CC--CCCH---HHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecCC
Q 017551           88 GMDLVIIPAGVPR--KP--GMTR---DDLFNINAGI----VRTLCEGIAKCCPNATVNLISNP  139 (369)
Q Consensus        88 ~ADiVii~ag~p~--k~--g~~r---~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNP  139 (369)
                      ..|++|..||...  .+  ..+.   ...+..|+.-    .+.+.+.+.+..  +.|+++|--
T Consensus        78 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~--g~iv~isS~  138 (254)
T 3kzv_A           78 KIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN--GNVVFVSSD  138 (254)
T ss_dssp             CCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCS
T ss_pred             CccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CeEEEEcCc
Confidence            7899999999732  22  2232   3345566544    444444445543  667777543

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=95.98  E-value=0.01  Score=54.43  Aligned_cols=114  Identities=14%  Similarity=0.098  Sum_probs=69.1

Q ss_pred             CCEEEEEcC--CCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC------
Q 017551           20 GFKVAILGA--AGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENALT------   87 (369)
Q Consensus        20 ~~KI~IiGA--~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~------   87 (369)
                      .+++.|+||  +|++|..++..|+..+.  +|++.|.+.... ..++.+.. ..++..+. .-+|   .+++++      
T Consensus         7 ~k~vlVTGa~~s~gIG~aia~~l~~~G~--~V~~~~r~~~~~-~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (269)
T 2h7i_A            7 GKRILVSGIITDSSIAFHIARVAQEQGA--QLVLTGFDRLRL-IQRITDRL-PAKAPLLELDVQNEEHLASLAGRVTEAI   82 (269)
T ss_dssp             TCEEEECCCSSTTSHHHHHHHHHHHTTC--EEEEEECSCHHH-HHHHHTTS-SSCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCCchHHHHHHHHHHCCC--EEEEEecChHHH-HHHHHHhc-CCCceEEEccCCCHHHHHHHHHHHHHHh
Confidence            357999998  89999999999999987  899999876221 11122111 11122111 1122   222333      


Q ss_pred             ----CCcEEEEcCCCCC------CC--CCCH---HHHHHHHHHHHHHHHHHHhhhC-CCeEEEEec
Q 017551           88 ----GMDLVIIPAGVPR------KP--GMTR---DDLFNINAGIVRTLCEGIAKCC-PNATVNLIS  137 (369)
Q Consensus        88 ----~ADiVii~ag~p~------k~--g~~r---~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t  137 (369)
                          ..|++|..||...      .+  ..+.   ...+..|+.-...+.+.+..+- +.+.|+++|
T Consensus        83 g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is  148 (269)
T 2h7i_A           83 GAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMD  148 (269)
T ss_dssp             CTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             CCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEc
Confidence                7899999998754      11  1232   3456678777777777766543 235666665

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=95.95  E-value=0.014  Score=54.51  Aligned_cols=76  Identities=21%  Similarity=0.257  Sum_probs=48.0

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhccc-CCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD-TGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~-~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      .+++||+|+||+|.+|+.++..+...+-..-+..+|.+.....-.|+.... ....+..   ++|+++.++++|+||...
T Consensus         5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v---~~dl~~ll~~~DVVIDfT   81 (272)
T 4f3y_A            5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVAL---TDDIERVCAEADYLIDFT   81 (272)
T ss_dssp             -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBC---BCCHHHHHHHCSEEEECS
T ss_pred             ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCcee---cCCHHHHhcCCCEEEEcC
Confidence            346899999988999999999888776443344578764211112222211 1112222   468888889999999863

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=95.95  E-value=0.014  Score=56.36  Aligned_cols=91  Identities=25%  Similarity=0.352  Sum_probs=59.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP   99 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p   99 (369)
                      .++|+|||. |.||+.++..++..+.  +|..||.........   .     ....   ..++++.+++||+|++..  |
T Consensus       173 gktvGIIGl-G~IG~~vA~~l~~~G~--~V~~~dr~~~~~~~~---~-----g~~~---~~~l~ell~~sDvV~l~~--P  236 (345)
T 4g2n_A          173 GRRLGIFGM-GRIGRAIATRARGFGL--AIHYHNRTRLSHALE---E-----GAIY---HDTLDSLLGASDIFLIAA--P  236 (345)
T ss_dssp             TCEEEEESC-SHHHHHHHHHHHTTTC--EEEEECSSCCCHHHH---T-----TCEE---CSSHHHHHHTCSEEEECS--C
T ss_pred             CCEEEEEEe-ChhHHHHHHHHHHCCC--EEEEECCCCcchhhh---c-----CCeE---eCCHHHHHhhCCEEEEec--C
Confidence            479999999 9999999999997776  999999875221111   1     1121   246889999999999984  3


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551          100 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus       100 ~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ..+. ++ .++  |    .   +.+...-|.+++|+++
T Consensus       237 lt~~-T~-~li--~----~---~~l~~mk~gailIN~a  263 (345)
T 4g2n_A          237 GRPE-LK-GFL--D----H---DRIAKIPEGAVVINIS  263 (345)
T ss_dssp             CCGG-GT-TCB--C----H---HHHHHSCTTEEEEECS
T ss_pred             CCHH-HH-HHh--C----H---HHHhhCCCCcEEEECC
Confidence            2111 11 001  1    1   2233345889999986

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=95.94  E-value=0.0047  Score=59.05  Aligned_cols=93  Identities=22%  Similarity=0.278  Sum_probs=60.5

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      ..++|+|||. |.||+.++..+...|.  +|..||.+....     .      .+..+.+..++++.+++||+|++..  
T Consensus       138 ~g~tvGIiG~-G~IG~~vA~~l~~~G~--~V~~~dr~~~~~-----~------~~~~~~~~~~l~ell~~aDiV~l~~--  201 (315)
T 3pp8_A          138 EEFSVGIMGA-GVLGAKVAESLQAWGF--PLRCWSRSRKSW-----P------GVESYVGREELRAFLNQTRVLINLL--  201 (315)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTC--CEEEEESSCCCC-----T------TCEEEESHHHHHHHHHTCSEEEECC--
T ss_pred             CCCEEEEEee-CHHHHHHHHHHHHCCC--EEEEEcCCchhh-----h------hhhhhcccCCHHHHHhhCCEEEEec--
Confidence            3579999999 9999999999997777  999999865210     0      1111112246888999999999984  


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 017551           99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      |..+. ++ .++  |       .+.+...-|.+++|+++.
T Consensus       202 Plt~~-t~-~li--~-------~~~l~~mk~gailIN~aR  230 (315)
T 3pp8_A          202 PNTAQ-TV-GII--N-------SELLDQLPDGAYVLNLAR  230 (315)
T ss_dssp             CCCGG-GT-TCB--S-------HHHHTTSCTTEEEEECSC
T ss_pred             CCchh-hh-hhc--c-------HHHHhhCCCCCEEEECCC
Confidence            32211 11 011  1       122333457899999863

>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1

Probab=95.92  E-value=0.016  Score=54.18  Aligned_cols=35  Identities=14%  Similarity=0.153  Sum_probs=31.2

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      +.++|.|+|+ |.+|...+..|...|.  +|+++|.+.
T Consensus        12 ~~k~VLVVGg-G~va~rka~~Ll~~Ga--~VtViap~~   46 (274)
T 1kyq_A           12 KDKRILLIGG-GEVGLTRLYKLMPTGC--KLTLVSPDL   46 (274)
T ss_dssp             TTCEEEEEEE-SHHHHHHHHHHGGGTC--EEEEEEEEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhCCC--EEEEEcCCC
Confidence            4579999999 9999999999999887  899999764

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=95.92  E-value=0.033  Score=55.31  Aligned_cols=93  Identities=17%  Similarity=0.243  Sum_probs=62.8

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchh-HHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG-VTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g-~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      -...+|+|+|. |.||..++..+...|.  +|+.+|++.... .+.  ..   .  ...    .++++++++||+|+.+.
T Consensus       218 L~GktV~ViG~-G~IGk~vA~~Lra~Ga--~Viv~D~dp~ra~~A~--~~---G--~~v----~~Leeal~~ADIVi~at  283 (435)
T 3gvp_A          218 FGGKQVVVCGY-GEVGKGCCAALKAMGS--IVYVTEIDPICALQAC--MD---G--FRL----VKLNEVIRQVDIVITCT  283 (435)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHH--HT---T--CEE----CCHHHHTTTCSEEEECS
T ss_pred             ecCCEEEEEee-CHHHHHHHHHHHHCCC--EEEEEeCChhhhHHHH--Hc---C--CEe----ccHHHHHhcCCEEEECC
Confidence            34579999999 9999999999998777  899999986221 111  11   1  111    24789999999999974


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC
Q 017551           97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN  141 (369)
Q Consensus        97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~  141 (369)
                      |.+   +.-.           .   +.+....|.+++++++.+-.
T Consensus       284 gt~---~lI~-----------~---e~l~~MK~gailINvgrg~~  311 (435)
T 3gvp_A          284 GNK---NVVT-----------R---EHLDRMKNSCIVCNMGHSNT  311 (435)
T ss_dssp             SCS---CSBC-----------H---HHHHHSCTTEEEEECSSTTT
T ss_pred             CCc---ccCC-----------H---HHHHhcCCCcEEEEecCCCc
Confidence            432   2100           0   22333458899999987743

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=95.88  E-value=0.0096  Score=55.41  Aligned_cols=69  Identities=12%  Similarity=0.214  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      +.+||+|||+ |.+|..++..|...+.  +|.++|.+..+  +.++....   .+..   .+++.++++++|+||++...
T Consensus       128 ~~~~v~iiGa-G~~g~aia~~L~~~g~--~V~v~~r~~~~--~~~l~~~~---g~~~---~~~~~~~~~~aDiVi~atp~  196 (275)
T 2hk9_A          128 KEKSILVLGA-GGASRAVIYALVKEGA--KVFLWNRTKEK--AIKLAQKF---PLEV---VNSPEEVIDKVQVIVNTTSV  196 (275)
T ss_dssp             GGSEEEEECC-SHHHHHHHHHHHHHTC--EEEEECSSHHH--HHHHTTTS---CEEE---CSCGGGTGGGCSEEEECSST
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHcCC--EEEEEECCHHH--HHHHHHHc---CCee---ehhHHhhhcCCCEEEEeCCC
Confidence            3579999999 9999999999988886  99999987522  22233211   1332   23667888999999998643

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=95.81  E-value=0.013  Score=55.62  Aligned_cols=64  Identities=25%  Similarity=0.339  Sum_probs=47.9

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      ..++|+|||. |.||+.++..++..+.  +|..||.+.....+.++     .  +..    .++++.+++||+|++..
T Consensus       141 ~g~~vgIiG~-G~IG~~~A~~l~~~G~--~V~~~d~~~~~~~~~~~-----g--~~~----~~l~ell~~aDvV~l~~  204 (307)
T 1wwk_A          141 EGKTIGIIGF-GRIGYQVAKIANALGM--NILLYDPYPNEERAKEV-----N--GKF----VDLETLLKESDVVTIHV  204 (307)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSCCHHHHHHT-----T--CEE----CCHHHHHHHCSEEEECC
T ss_pred             CCceEEEEcc-CHHHHHHHHHHHHCCC--EEEEECCCCChhhHhhc-----C--ccc----cCHHHHHhhCCEEEEec
Confidence            3579999999 9999999999998776  99999987633222211     1  121    25778899999999984

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=95.79  E-value=0.022  Score=51.37  Aligned_cols=109  Identities=16%  Similarity=0.167  Sum_probs=58.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCC----------CChhhhcCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ----------PQLENALTGM   89 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t----------~dl~~al~~A   89 (369)
                      .+++.|+||+|++|..++..|+. +.  .|+++|.+....  .++.+.   ..+......          .+..+.+...
T Consensus         5 ~k~vlITGas~gIG~~~a~~l~~-g~--~v~~~~r~~~~~--~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   76 (245)
T 3e9n_A            5 KKIAVVTGATGGMGIEIVKDLSR-DH--IVYALGRNPEHL--AALAEI---EGVEPIESDIVKEVLEEGGVDKLKNLDHV   76 (245)
T ss_dssp             -CEEEEESTTSHHHHHHHHHHTT-TS--EEEEEESCHHHH--HHHHTS---TTEEEEECCHHHHHHTSSSCGGGTTCSCC
T ss_pred             CCEEEEEcCCCHHHHHHHHHHhC-CC--eEEEEeCCHHHH--HHHHhh---cCCcceecccchHHHHHHHHHHHHhcCCC
Confidence            45899999999999999999976 54  899999875211  111111   112211100          0111234578


Q ss_pred             cEEEEcCCCCCCCC---CC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 017551           90 DLVIIPAGVPRKPG---MT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        90 DiVii~ag~p~k~g---~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      |++|..||......   .+   ....+..|+..    .+.+.+.+.+..  +.++++|-
T Consensus        77 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--g~iv~isS  133 (245)
T 3e9n_A           77 DTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS--GCVIYINS  133 (245)
T ss_dssp             SEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEC-
T ss_pred             CEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEcC
Confidence            99999998753221   11   22345556544    555555555443  55666653

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=95.77  E-value=0.054  Score=48.76  Aligned_cols=116  Identities=19%  Similarity=0.198  Sum_probs=69.2

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCC-C--chhHHHHhhcccCCCeEEEEe-CCCCh---hhhcC----
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-N--TPGVTADISHMDTGAVVRGFL-GQPQL---ENALT----   87 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~-~--~~g~~~dL~~~~~~~~v~~~~-~t~dl---~~al~----   87 (369)
                      +.+.+.|+||+|++|..++..|+..+.  .+++.+.. .  ......++...  ...+.... .-+|.   ++.++    
T Consensus         6 ~~k~vlITGas~gIG~~~a~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (255)
T 3icc_A            6 KGKVALVTGASRGIGRAIAKRLANDGA--LVAIHYGNRKEEAEETVYEIQSN--GGSAFSIGANLESLHGVEALYSSLDN   81 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCSHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC--eEEEEeCCchHHHHHHHHHHHhc--CCceEEEecCcCCHHHHHHHHHHHHH
Confidence            345899999999999999999999987  88776443 3  22233344332  23333322 11222   11111    


Q ss_pred             ---------CCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 017551           88 ---------GMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  138 (369)
Q Consensus        88 ---------~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN  138 (369)
                               ..|++|..||.....   ..+.   ...+..|+.-...+.+.+..+- +.+.|+++|-
T Consensus        82 ~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS  148 (255)
T 3icc_A           82 ELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISS  148 (255)
T ss_dssp             HHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECC
T ss_pred             HhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCC
Confidence                     289999999874321   1222   3446677776666666665442 3466777764

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=95.76  E-value=0.06  Score=51.14  Aligned_cols=116  Identities=17%  Similarity=0.149  Sum_probs=66.5

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHhhccc--CCCeEEEEe-CCCC---hhhhcC---
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMD--TGAVVRGFL-GQPQ---LENALT---   87 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~---~~g~~~dL~~~~--~~~~v~~~~-~t~d---l~~al~---   87 (369)
                      .+.|.|+||+|++|..++..|+..|.  +|++.+.+.   ......++....  ...++..+. .-+|   ..++++   
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~~G~--~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~   82 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAGAGH--RVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQII   82 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            35799999999999999999999997  888877652   111111111110  112333322 1122   233343   


Q ss_pred             ----CCcEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHH----hhhCCCeEEEEecC
Q 017551           88 ----GMDLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEGI----AKCCPNATVNLISN  138 (369)
Q Consensus        88 ----~ADiVii~ag~p~k-~--g~~---r~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tN  138 (369)
                          +.|+||..||.... +  ..+   ....+..|+.....+.+.+    .+.. .+.||++|.
T Consensus        83 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~-~g~iV~isS  146 (324)
T 3u9l_A           83 GEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQK-HGLLIWISS  146 (324)
T ss_dssp             HHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEec
Confidence                89999999996431 1  122   2345566765555554444    5443 456666653

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=95.74  E-value=0.0056  Score=60.34  Aligned_cols=75  Identities=23%  Similarity=0.190  Sum_probs=50.4

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCC-cEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-C---CCChhhhcCC--CcE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLV-SVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-G---QPQLENALTG--MDL   91 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~-~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~---t~dl~~al~~--ADi   91 (369)
                      +||+|+|| |++|+.++..|++.+.+ .+|++.|.+..  ...+.++.... ...+.... .   ..++.+.+++  +|+
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~-~~~~~~~~~D~~d~~~l~~~l~~~~~Dv   79 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKG-YGEIDITTVDADSIEELVALINEVKPQI   79 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTT-CCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhc-CCceEEEEecCCCHHHHHHHHHhhCCCE
Confidence            59999999 99999999999988754 69999999862  33333443211 11222211 1   1345566776  899


Q ss_pred             EEEcCC
Q 017551           92 VIIPAG   97 (369)
Q Consensus        92 Vii~ag   97 (369)
                      ||.+++
T Consensus        80 Vin~ag   85 (405)
T 4ina_A           80 VLNIAL   85 (405)
T ss_dssp             EEECSC
T ss_pred             EEECCC
Confidence            999975

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=95.74  E-value=0.028  Score=51.16  Aligned_cols=114  Identities=17%  Similarity=0.147  Sum_probs=65.5

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCCh---hhh--------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQL---ENA--------   85 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~dl---~~a--------   85 (369)
                      .+++.|+||+|++|..++..|+..+.  +|++.|.+..  .....++...  ..++..+. .-+|.   .++        
T Consensus         5 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (260)
T 2qq5_A            5 GQVCVVTGASRGIGRGIALQLCKAGA--TVYITGRHLDTLRVVAQEAQSL--GGQCVPVVCDSSQESEVRSLFEQVDREQ   80 (260)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHH--SSEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHc--CCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            45899999999999999999999987  8999998762  2223333321  12333322 12232   122        


Q ss_pred             cCCCcEEEEcCC--CC------CCC--CCC---HHHHHHHHH----HHHHHHHHHHhhhCCCeEEEEecC
Q 017551           86 LTGMDLVIIPAG--VP------RKP--GMT---RDDLFNINA----GIVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        86 l~~ADiVii~ag--~p------~k~--g~~---r~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      +...|++|..||  ..      ..+  ..+   ....+..|+    .+.+.+.+.+.+.. .+.|+++|-
T Consensus        81 ~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS  149 (260)
T 2qq5_A           81 QGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAG-QGLIVVISS  149 (260)
T ss_dssp             TTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGT-CCEEEEECC
T ss_pred             CCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcC-CcEEEEEcC
Confidence            345699999994  31      222  122   223334443    33455555555443 456777654

>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}

Probab=95.73  E-value=0.03  Score=57.00  Aligned_cols=134  Identities=17%  Similarity=0.187  Sum_probs=78.6

Q ss_pred             CCEEEEEcCCCccHHH-HHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           20 GFKVAILGAAGGIGQP-LAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~-la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      .+||.|||. |.+|.+ +|..|...|.  +|...|..........|...  ..  ..+.+. +.+.-..++|+||.+.|+
T Consensus        19 ~~~i~~iGi-Gg~Gms~lA~~l~~~G~--~V~~sD~~~~~~~~~~L~~~--gi--~~~~G~-~~~~~~~~~d~vV~Spgi   90 (524)
T 3hn7_A           19 GMHIHILGI-CGTFMGSLALLARALGH--TVTGSDANIYPPMSTQLEQA--GV--TIEEGY-LIAHLQPAPDLVVVGNAM   90 (524)
T ss_dssp             CCEEEEETT-TSHHHHHHHHHHHHTTC--EEEEEESCCCTTHHHHHHHT--TC--EEEESC-CGGGGCSCCSEEEECTTC
T ss_pred             CCEEEEEEe-cHhhHHHHHHHHHhCCC--EEEEECCCCCcHHHHHHHHC--CC--EEECCC-CHHHcCCCCCEEEECCCc
Confidence            469999999 888886 6888888998  99999997522222234432  22  333332 332323689999999888


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecCCCC--ChhHHHHHHHHHhCCCCCCcEEE
Q 017551           99 PRKPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVN--STVPIAAEVFKKAGTYDPKKLLG  164 (369)
Q Consensus        99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNPv~--~~t~i~ae~~~~~~~~~~~kviG  164 (369)
                      |...-+ ......++++++.+. +.+.++ .++..+|-+|--.+  ++|.+++++++.. |+++.-++|
T Consensus        91 ~~~~p~-l~~a~~~gi~v~~~~-e~l~~~~~~~~~vIaVTGTnGKTTTt~li~~iL~~~-G~~~~~~iG  156 (524)
T 3hn7_A           91 KRGMDV-IEYMLDTGLRYTSGP-QFLSEQVLQSRHVIAVAGTHGKTTTTTMLAWILHYA-GIDAGFLIG  156 (524)
T ss_dssp             CTTSHH-HHHHHHHTCCEEEHH-HHHHHHTGGGSEEEEEECSSCHHHHHHHHHHHHHHT-TCCCEEECS
T ss_pred             CCCCHH-HHHHHHCCCcEEEHH-HHHHHHHhccCcEEEEECCCCHHHHHHHHHHHHHHc-CCCceEEEC
Confidence            753211 112224455555443 222232 33445666665555  5667777777664 565544444

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=95.72  E-value=0.014  Score=53.72  Aligned_cols=109  Identities=16%  Similarity=0.173  Sum_probs=66.6

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCC----------hhhhcCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ----------LENALTGM   89 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~d----------l~~al~~A   89 (369)
                      +.|.|+||+++||..++..|+..|.  +|++.|+++..  ..++....  .++..+. .-+|          ..+.+..-
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga--~V~~~~~~~~~--~~~~~~~~--~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~i   76 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGD--KVCFIDIDEKR--SADFAKER--PNLFYFHGDVADPLTLKKFVEYAMEKLQRI   76 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHH--HHHHHTTC--TTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC--EEEEEeCCHHH--HHHHHHhc--CCEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999998  99999998621  12222211  1222221 1122          12345689


Q ss_pred             cEEEEcCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHhhhCCCeEEEEec
Q 017551           90 DLVIIPAGVPRKP---GMT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        90 DiVii~ag~p~k~---g~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      |++|..||.....   ..+   ....+..|+.    ..+.+.+.+.+.  .+.||+++
T Consensus        77 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~--~G~IInis  132 (247)
T 3ged_A           77 DVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN--KGRIINIA  132 (247)
T ss_dssp             CEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--TCEEEEEC
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCcEEEEe
Confidence            9999999875432   223   2334556654    344555555543  46677764

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=95.71  E-value=0.19  Score=45.86  Aligned_cols=115  Identities=10%  Similarity=0.087  Sum_probs=68.0

Q ss_pred             CCEEEEEcCCC--ccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCCh----------hh
Q 017551           20 GFKVAILGAAG--GIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQL----------EN   84 (369)
Q Consensus        20 ~~KI~IiGA~G--~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~dl----------~~   84 (369)
                      .+.+.|+||+|  +||..++..|++.|.  +|++.|+++.  ......+.... ..++..+. .-+|.          .+
T Consensus         6 gK~alVTGaa~~~GIG~aiA~~la~~Ga--~Vvi~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (256)
T 4fs3_A            6 NKTYVIMGIANKRSIAFGVAKVLDQLGA--KLVFTYRKERSRKELEKLLEQLN-QPEAHLYQIDVQSDEEVINGFEQIGK   82 (256)
T ss_dssp             TCEEEEECCCSTTCHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHGGGT-CSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCchHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC-CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            45788999876  799999999999998  9999999872  22222233322 22233221 11222          13


Q ss_pred             hcCCCcEEEEcCCCCCC-----C--CCCHHHH---HHHHHHHHHHHHHHHhhhCC-CeEEEEec
Q 017551           85 ALTGMDLVIIPAGVPRK-----P--GMTRDDL---FNINAGIVRTLCEGIAKCCP-NATVNLIS  137 (369)
Q Consensus        85 al~~ADiVii~ag~p~k-----~--g~~r~~~---~~~N~~i~~~i~~~i~~~~p-~a~viv~t  137 (369)
                      .+-..|++|..+|....     +  ..+..++   +..|.......+.....+.+ .+.||++|
T Consensus        83 ~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnis  146 (256)
T 4fs3_A           83 DVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATT  146 (256)
T ss_dssp             HHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEE
T ss_pred             HhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEe
Confidence            34679999999886431     1  1233332   34455545555555554443 56777775

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=95.70  E-value=0.046  Score=55.07  Aligned_cols=116  Identities=18%  Similarity=0.145  Sum_probs=73.5

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-----hhHHHHhhcccCCCeEEEEeC-CCC---hhhhcCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-----PGVTADISHMDTGAVVRGFLG-QPQ---LENALTG   88 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-----~g~~~dL~~~~~~~~v~~~~~-t~d---l~~al~~   88 (369)
                      .+..+|.|+||+|++|..++..|+.++. ..|++++.+..     .....+|...  ..++....+ -+|   +.+.++.
T Consensus       224 ~~~~~vLITGgtGgIG~~la~~La~~G~-~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dv~d~~~v~~~~~~  300 (486)
T 2fr1_A          224 KPTGTVLVTGGTGGVGGQIARWLARRGA-PHLLLVSRSGPDADGAGELVAELEAL--GARTTVAACDVTDRESVRELLGG  300 (486)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTC-SEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCC-CEEEEEcCCCCCcHHHHHHHHHHHhc--CCEEEEEEeCCCCHHHHHHHHHH
Confidence            4457999999999999999999988875 25999998752     1222334332  234444321 223   3344555


Q ss_pred             C------cEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           89 M------DLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        89 A------DiVii~ag~p~k~---g~~r---~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      +      |.||.+||+....   .++.   ...+..|+.....+.+.+.... ...++++|
T Consensus       301 i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~-~~~~V~~S  360 (486)
T 2fr1_A          301 IGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD-LTAFVLFS  360 (486)
T ss_dssp             SCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-CSEEEEEE
T ss_pred             HHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCC-CCEEEEEc
Confidence            4      9999999976432   1232   2345668888888888777653 34455554

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=95.69  E-value=0.019  Score=55.22  Aligned_cols=94  Identities=28%  Similarity=0.391  Sum_probs=60.7

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      -..++|+|||. |.||+.++..++..+.  +|..||.+.....+.++     ..  ..    .++++.+++||+|++.. 
T Consensus       163 l~g~tvgIIGl-G~IG~~vA~~l~~~G~--~V~~~d~~~~~~~~~~~-----g~--~~----~~l~ell~~aDvV~l~~-  227 (335)
T 2g76_A          163 LNGKTLGILGL-GRIGREVATRMQSFGM--KTIGYDPIISPEVSASF-----GV--QQ----LPLEEIWPLCDFITVHT-  227 (335)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTC--EEEEECSSSCHHHHHHT-----TC--EE----CCHHHHGGGCSEEEECC-
T ss_pred             CCcCEEEEEeE-CHHHHHHHHHHHHCCC--EEEEECCCcchhhhhhc-----Cc--ee----CCHHHHHhcCCEEEEec-
Confidence            34579999999 9999999999987776  99999987633222211     11  11    25778899999999984 


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 017551           98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                       |..+. ++ .++  |    .   +.+...-|.+++|+++-
T Consensus       228 -P~t~~-t~-~li--~----~---~~l~~mk~gailIN~ar  256 (335)
T 2g76_A          228 -PLLPS-TT-GLL--N----D---NTFAQCKKGVRVVNCAR  256 (335)
T ss_dssp             -CCCTT-TT-TSB--C----H---HHHTTSCTTEEEEECSC
T ss_pred             -CCCHH-HH-Hhh--C----H---HHHhhCCCCcEEEECCC
Confidence             32221 11 011  1    1   22333457899998864

>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A

Probab=95.65  E-value=0.028  Score=53.65  Aligned_cols=70  Identities=11%  Similarity=0.081  Sum_probs=49.3

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      ...+|+|||+ |.+|...+..+.....+.+|.++|++.  +...+.++....  ..+. +   +++++++ ++|+|+++-
T Consensus       124 ~~~~v~iIGa-G~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~--~~~~-~---~~~~e~v-~aDvVi~aT  195 (322)
T 1omo_A          124 NSSVFGFIGC-GTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRG--ISAS-V---QPAEEAS-RCDVLVTTT  195 (322)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTT--CCEE-E---CCHHHHT-SSSEEEECC
T ss_pred             CCCEEEEEcC-cHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcC--ceEE-E---CCHHHHh-CCCEEEEee
Confidence            4569999999 999999988887644467999999986  233333343211  1233 2   4678889 999999974

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=95.63  E-value=0.11  Score=50.84  Aligned_cols=117  Identities=18%  Similarity=0.195  Sum_probs=74.5

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhH--------HHHhhcccCCCeEEEEeCCCChhhhcC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGV--------TADISHMDTGAVVRGFLGQPQLENALT   87 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~--------~~dL~~~~~~~~v~~~~~t~dl~~al~   87 (369)
                      -+..||+|+|| |.+|..++..|...|. .+|.++|.+.  ..+.        ...+.+. +..    .....++.++++
T Consensus       190 l~~~kVVv~GA-GaAG~~iAkll~~~G~-~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~-~~~----~~~~~~L~eav~  262 (388)
T 1vl6_A          190 IEEVKVVVNGI-GAAGYNIVKFLLDLGV-KNVVAVDRKGILNENDPETCLNEYHLEIARI-TNP----ERLSGDLETALE  262 (388)
T ss_dssp             TTTCEEEEECC-SHHHHHHHHHHHHHTC-CEEEEEETTEECCTTSGGGCSSHHHHHHHHT-SCT----TCCCSCHHHHHT
T ss_pred             CCCcEEEEECC-CHHHHHHHHHHHhCCC-CeEEEEECCCcccCCCcccccCHHHHHHHHh-hhc----cCchhhHHHHHc
Confidence            45679999999 9999999998887773 6899999983  1111        1122221 111    112457999999


Q ss_pred             CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEec
Q 017551           88 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT  166 (369)
Q Consensus        88 ~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t  166 (369)
                      +||++|=+.+ |   +.-           -+++.+.|   .++.+|+=.+||.--+++   +-.++. |   +.+|++.
T Consensus       263 ~ADVlIG~Sa-p---~l~-----------t~emVk~M---a~~pIIfalSNPt~E~~p---~~a~~~-g---~~i~atG  316 (388)
T 1vl6_A          263 GADFFIGVSR-G---NIL-----------KPEWIKKM---SRKPVIFALANPVPEIDP---ELAREA-G---AFIVATG  316 (388)
T ss_dssp             TCSEEEECSC-S---SCS-----------CHHHHTTS---CSSCEEEECCSSSCSSCH---HHHHHT-T---CSEEEES
T ss_pred             cCCEEEEeCC-C---Ccc-----------CHHHHHhc---CCCCEEEEcCCCCCCCCH---HHHHHh-c---CeEEEeC
Confidence            9999988754 4   311           12333333   267777778999865554   323443 2   4788764

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=95.62  E-value=0.1  Score=43.51  Aligned_cols=85  Identities=9%  Similarity=0.083  Sum_probs=52.6

Q ss_pred             CCCCEEEEEcCC---CccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEE
Q 017551           18 AAGFKVAILGAA---GGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVII   94 (369)
Q Consensus        18 ~~~~KI~IiGA~---G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii   94 (369)
                      .++.+|+|||+|   |.+|..++..|...++  +|+-+|....  .   +      ..+..+   .++.+..+++|+|++
T Consensus        12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~--~V~~vnp~~~--~---i------~G~~~~---~s~~el~~~vDlvii   75 (138)
T 1y81_A           12 KEFRKIALVGASKNPAKYGNIILKDLLSKGF--EVLPVNPNYD--E---I------EGLKCY---RSVRELPKDVDVIVF   75 (138)
T ss_dssp             --CCEEEEETCCSCTTSHHHHHHHHHHHTTC--EEEEECTTCS--E---E------TTEECB---SSGGGSCTTCCEEEE
T ss_pred             cCCCeEEEEeecCCCCCHHHHHHHHHHHCCC--EEEEeCCCCC--e---E------CCeeec---CCHHHhCCCCCEEEE
Confidence            456799999997   8899999999998888  6444443321  0   1      122322   345565678999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEE
Q 017551           95 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN  134 (369)
Q Consensus        95 ~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~vi  134 (369)
                      +.  |              .+.+.++++++.+....++++
T Consensus        76 ~v--p--------------~~~v~~v~~~~~~~g~~~i~~   99 (138)
T 1y81_A           76 VV--P--------------PKVGLQVAKEAVEAGFKKLWF   99 (138)
T ss_dssp             CS--C--------------HHHHHHHHHHHHHTTCCEEEE
T ss_pred             Ee--C--------------HHHHHHHHHHHHHcCCCEEEE
Confidence            83  2              234455555555556666444

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=95.61  E-value=0.22  Score=45.92  Aligned_cols=112  Identities=14%  Similarity=0.141  Sum_probs=67.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch-hHHHHhhcccCCCeEEEEe-CCCC----------hhhhcC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGFL-GQPQ----------LENALT   87 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~-g~~~dL~~~~~~~~v~~~~-~t~d----------l~~al~   87 (369)
                      .+.+.|+||+++||..++..|+..|.  .+++.|.+... ..+..+....  .+...+. .-+|          ..+.+-
T Consensus         7 gKvalVTGas~GIG~aia~~la~~Ga--~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~v~~~~~~~G   82 (258)
T 4gkb_A            7 DKVVIVTGGASGIGGAISMRLAEERA--IPVVFARHAPDGAFLDALAQRQ--PRATYLPVELQDDAQCRDAVAQTIATFG   82 (258)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCCCHHHHHHHHHHC--TTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCC--EEEEEECCcccHHHHHHHHhcC--CCEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            45788999999999999999999997  99999998732 2222222211  1122111 1122          123356


Q ss_pred             CCcEEEEcCCCCCCCC--CCH---HHHHHHHH----HHHHHHHHHHhhhCCCeEEEEec
Q 017551           88 GMDLVIIPAGVPRKPG--MTR---DDLFNINA----GIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        88 ~ADiVii~ag~p~k~g--~~r---~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      .-|++|..||+.....  ++.   ...+..|+    ...+...+.+++.  .+.||+++
T Consensus        83 ~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~--~G~IVnis  139 (258)
T 4gkb_A           83 RLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT--RGAIVNIS  139 (258)
T ss_dssp             CCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEC
T ss_pred             CCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCeEEEEe
Confidence            7899999999754332  333   23345554    3455556666543  36677775

>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}

Probab=95.60  E-value=0.0098  Score=56.61  Aligned_cols=59  Identities=22%  Similarity=0.245  Sum_probs=46.5

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      ..++|+|||. |.||+.++..++..+.  +|..||.+.....            +.    ..++++.++.||+|++..
T Consensus       143 ~g~~vgIIG~-G~IG~~~A~~l~~~G~--~V~~~d~~~~~~~------------~~----~~~l~ell~~aDvV~l~~  201 (311)
T 2cuk_A          143 QGLTLGLVGM-GRIGQAVAKRALAFGM--RVVYHARTPKPLP------------YP----FLSLEELLKEADVVSLHT  201 (311)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSCCSSS------------SC----BCCHHHHHHHCSEEEECC
T ss_pred             CCCEEEEEEE-CHHHHHHHHHHHHCCC--EEEEECCCCcccc------------cc----cCCHHHHHhhCCEEEEeC
Confidence            4579999999 9999999999998776  8999998752211            11    235778899999999974

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=95.58  E-value=0.068  Score=48.42  Aligned_cols=74  Identities=11%  Similarity=0.080  Sum_probs=50.5

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      -+.++|.|||| |.+|...+..|...+.  +|.++|.+... ...+|...   ..++.....-+ .+.+.++|+||.+.+
T Consensus        29 L~gk~VLVVGg-G~va~~ka~~Ll~~GA--~VtVvap~~~~-~l~~l~~~---~~i~~i~~~~~-~~dL~~adLVIaAT~  100 (223)
T 3dfz_A           29 LKGRSVLVVGG-GTIATRRIKGFLQEGA--AITVVAPTVSA-EINEWEAK---GQLRVKRKKVG-EEDLLNVFFIVVATN  100 (223)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHGGGCC--CEEEECSSCCH-HHHHHHHT---TSCEEECSCCC-GGGSSSCSEEEECCC
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEECCCCCH-HHHHHHHc---CCcEEEECCCC-HhHhCCCCEEEECCC
Confidence            34579999999 9999999999998886  89999986432 22334332   23333322222 367899999998754


Q ss_pred             CC
Q 017551           98 VP   99 (369)
Q Consensus        98 ~p   99 (369)
                      .+
T Consensus       101 d~  102 (223)
T 3dfz_A          101 DQ  102 (223)
T ss_dssp             CT
T ss_pred             CH
Confidence            44

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=95.57  E-value=0.021  Score=52.46  Aligned_cols=35  Identities=31%  Similarity=0.482  Sum_probs=30.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ..||+|+|+ |.+|+.++..|+..|. .+|.|+|.+.
T Consensus        28 ~~~VlvvG~-GglG~~va~~La~~Gv-g~i~lvD~d~   62 (251)
T 1zud_1           28 DSQVLIIGL-GGLGTPAALYLAGAGV-GTLVLADDDD   62 (251)
T ss_dssp             TCEEEEECC-STTHHHHHHHHHHTTC-SEEEEECCCB
T ss_pred             cCcEEEEcc-CHHHHHHHHHHHHcCC-CeEEEEeCCC
Confidence            459999999 9999999999999885 5999999874

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=95.54  E-value=0.044  Score=53.46  Aligned_cols=69  Identities=16%  Similarity=0.230  Sum_probs=45.0

Q ss_pred             CEEEEEcCCCccHHHHHH-HHHhCCC-CcEEEEEeCCCchhHH-HHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAM-LMKINPL-VSVLHLYDVVNTPGVT-ADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~-~l~~~~~-~~el~L~D~~~~~g~~-~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      +||+|+||+|.+|+-+.. +|..++. ..++.++.... .|.. .++..    ..+.... .++. +.++++|+||.+.
T Consensus         1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~-aG~~~~~~~~----~~~~~~~-~~~~-~~~~~~Dvvf~a~   72 (370)
T 3pzr_A            1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQ-IGVPAPNFGK----DAGMLHD-AFDI-ESLKQLDAVITCQ   72 (370)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSBCCCSSS----CCCBCEE-TTCH-HHHTTCSEEEECS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccc-cCcCHHHhCC----CceEEEe-cCCh-hHhccCCEEEECC
Confidence            699999999999999998 8888773 45888876544 2221 12211    1122111 2233 5689999999985

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=95.52  E-value=0.034  Score=52.25  Aligned_cols=57  Identities=23%  Similarity=0.374  Sum_probs=46.3

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      -+..+++|||+++.+|.+++..|...+.  .+.+.+..                       +.++++.++.||+||.+.|
T Consensus       158 l~Gk~vvVvGrs~iVG~p~A~lL~~~gA--tVtv~h~~-----------------------t~~L~~~~~~ADIVI~Avg  212 (285)
T 3p2o_A          158 LEGKDAVIIGASNIVGRPMATMLLNAGA--TVSVCHIK-----------------------TKDLSLYTRQADLIIVAAG  212 (285)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTC--EEEEECTT-----------------------CSCHHHHHTTCSEEEECSS
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC--eEEEEeCC-----------------------chhHHHHhhcCCEEEECCC
Confidence            4567999999956689999999998876  67776531                       3578889999999999988


Q ss_pred             CC
Q 017551           98 VP   99 (369)
Q Consensus        98 ~p   99 (369)
                      .|
T Consensus       213 ~p  214 (285)
T 3p2o_A          213 CV  214 (285)
T ss_dssp             CT
T ss_pred             CC
Confidence            65

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=95.52  E-value=0.13  Score=46.61  Aligned_cols=115  Identities=11%  Similarity=0.137  Sum_probs=67.2

Q ss_pred             CCCEEEEEcCC--CccHHHHHHHHHhCCCCcEEEEEeCCCc---hhHHHHhhcccCCCeEEEEe-CCCC---hhhh----
Q 017551           19 AGFKVAILGAA--GGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL-GQPQ---LENA----   85 (369)
Q Consensus        19 ~~~KI~IiGA~--G~vGs~la~~l~~~~~~~el~L~D~~~~---~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a----   85 (369)
                      +.+++.|+||+  |++|..++..|+..+.  .++++|.+..   .....++.... ..++..+. .-+|   .+++    
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~~G~--~v~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~   95 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAEMGA--AVAITYASRAQGAEENVKELEKTY-GIKAKAYKCQVDSYESCEKLVKDV   95 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHHTSC--EEEECBSSSSSHHHHHHHHHHHHH-CCCEECCBCCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCC--eEEEEeCCcchhHHHHHHHHHHhc-CCceeEEecCCCCHHHHHHHHHHH
Confidence            44689999998  8999999999999987  8999988762   23333443211 12333221 1122   2222    


Q ss_pred             ---cCCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHH----HHHHHHHhhhCCCeEEEEec
Q 017551           86 ---LTGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIV----RTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        86 ---l~~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~t  137 (369)
                         +...|++|..||.....   ..+.   ...+..|+.-.    +.+.+.+.+.. .+.+++++
T Consensus        96 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~is  159 (267)
T 3gdg_A           96 VADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERG-TGSLVITA  159 (267)
T ss_dssp             HHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEEC
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcC-CceEEEEc
Confidence               23679999999975432   1222   33455665444    44444445543 45566554

>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}

Probab=95.51  E-value=0.019  Score=55.06  Aligned_cols=64  Identities=27%  Similarity=0.351  Sum_probs=48.2

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      ..++|+|||. |.||+.++..++..+.  +|..||.+.....+.++       .+..    .++++.+++||+|++..
T Consensus       145 ~g~~vgIIG~-G~iG~~vA~~l~~~G~--~V~~~d~~~~~~~~~~~-------g~~~----~~l~e~l~~aDiVil~v  208 (333)
T 2d0i_A          145 YGKKVGILGM-GAIGKAIARRLIPFGV--KLYYWSRHRKVNVEKEL-------KARY----MDIDELLEKSDIVILAL  208 (333)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTC--EEEEECSSCCHHHHHHH-------TEEE----CCHHHHHHHCSEEEECC
T ss_pred             CcCEEEEEcc-CHHHHHHHHHHHHCCC--EEEEECCCcchhhhhhc-------Ccee----cCHHHHHhhCCEEEEcC
Confidence            4579999999 9999999999988776  99999997643222111       1221    25778899999999985

>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}

Probab=95.49  E-value=0.047  Score=53.41  Aligned_cols=72  Identities=14%  Similarity=0.283  Sum_probs=45.9

Q ss_pred             CCCEEEEEcCCCccHHHHHH-HHHhCCC-CcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           19 AGFKVAILGAAGGIGQPLAM-LMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~-~l~~~~~-~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      .++||+|+||+|.+|+-+.. +|..++. ..+++++....+-....++...  ...+..   .++. ++++++|+||.+.
T Consensus         3 ~~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~~~~~~~~~--~~~v~~---~~~~-~~~~~vDvvf~a~   76 (377)
T 3uw3_A            3 GSMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSNAGGKAPSFAKN--ETTLKD---ATSI-DDLKKCDVIITCQ   76 (377)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSCTTSBCCTTCCS--CCBCEE---TTCH-HHHHTCSEEEECS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEechhcCCCHHHcCCC--ceEEEe---CCCh-hHhcCCCEEEECC
Confidence            35799999999999999998 8888773 4588887654311111222211  112221   2233 5678999999985

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=95.48  E-value=0.036  Score=52.48  Aligned_cols=58  Identities=19%  Similarity=0.384  Sum_probs=46.9

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      -+..+++|||++..+|.+++..|...+-  .+.+++..                       +.++++.++.||+||.+.|
T Consensus       163 l~gk~vvVIG~s~iVG~p~A~lL~~~gA--tVtv~hs~-----------------------t~~L~~~~~~ADIVI~Avg  217 (301)
T 1a4i_A          163 IAGRHAVVVGRSKIVGAPMHDLLLWNNA--TVTTCHSK-----------------------TAHLDEEVNKGDILVVATG  217 (301)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTC--EEEEECTT-----------------------CSSHHHHHTTCSEEEECCC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCC--eEEEEECC-----------------------cccHHHHhccCCEEEECCC
Confidence            4567999999933689999999998875  77777621                       4678899999999999988


Q ss_pred             CCC
Q 017551           98 VPR  100 (369)
Q Consensus        98 ~p~  100 (369)
                      .|.
T Consensus       218 ~p~  220 (301)
T 1a4i_A          218 QPE  220 (301)
T ss_dssp             CTT
T ss_pred             Ccc
Confidence            763

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=95.47  E-value=0.02  Score=55.51  Aligned_cols=75  Identities=24%  Similarity=0.283  Sum_probs=51.2

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchh-HHHHhhcccCCCeEEEE-eCCCChhhhcCCCcEEEEc
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG-VTADISHMDTGAVVRGF-LGQPQLENALTGMDLVIIP   95 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g-~~~dL~~~~~~~~v~~~-~~t~dl~~al~~ADiVii~   95 (369)
                      -++++|+|+|+ |.+|..++..++..|.  +|+++|.+.... .+.+.  .  ...+... ....++.+.++++|+||.+
T Consensus       164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga--~V~~~d~~~~~~~~~~~~--~--g~~~~~~~~~~~~l~~~~~~~DvVi~~  236 (369)
T 2eez_A          164 VAPASVVILGG-GTVGTNAAKIALGMGA--QVTILDVNHKRLQYLDDV--F--GGRVITLTATEANIKKSVQHADLLIGA  236 (369)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHH--T--TTSEEEEECCHHHHHHHHHHCSEEEEC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHHh--c--CceEEEecCCHHHHHHHHhCCCEEEEC
Confidence            34589999999 9999999999998887  899999976221 12111  1  1122221 1224566788999999999


Q ss_pred             CCCC
Q 017551           96 AGVP   99 (369)
Q Consensus        96 ag~p   99 (369)
                      ++.+
T Consensus       237 ~g~~  240 (369)
T 2eez_A          237 VLVP  240 (369)
T ss_dssp             CC--
T ss_pred             CCCC
Confidence            8765

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=95.45  E-value=0.018  Score=53.76  Aligned_cols=111  Identities=19%  Similarity=0.178  Sum_probs=67.9

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeCCCC----------hhhhcCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQ----------LENALTG   88 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~t~d----------l~~al~~   88 (369)
                      +.+.|+||+++||..++..|+..|.  .|++.|++.  +...+.++....  ..+..  .-+|          ..+.+-.
T Consensus        30 KvalVTGas~GIG~aiA~~la~~Ga--~V~i~~r~~~~l~~~~~~~g~~~--~~~~~--Dv~~~~~v~~~~~~~~~~~G~  103 (273)
T 4fgs_A           30 KIAVITGATSGIGLAAAKRFVAEGA--RVFITGRRKDVLDAAIAEIGGGA--VGIQA--DSANLAELDRLYEKVKAEAGR  103 (273)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHCTTC--EEEEC--CTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCcCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHcCCCe--EEEEe--cCCCHHHHHHHHHHHHHHcCC
Confidence            4677889999999999999999998  999999986  333344442211  11111  1122          1233457


Q ss_pred             CcEEEEcCCCCC-CC--CCC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEec
Q 017551           89 MDLVIIPAGVPR-KP--GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS  137 (369)
Q Consensus        89 ADiVii~ag~p~-k~--g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t  137 (369)
                      -|++|..||... .|  ..+   ....+..|+.-.-.+.+..-.+- ..+.||+++
T Consensus       104 iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInis  159 (273)
T 4fgs_A          104 IDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTG  159 (273)
T ss_dssp             EEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEC
T ss_pred             CCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEe
Confidence            899999988643 22  122   34556777666555555544433 245566664

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=95.44  E-value=0.019  Score=56.68  Aligned_cols=105  Identities=21%  Similarity=0.257  Sum_probs=63.7

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcccCCCe---------EEEEeC---------
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAV---------VRGFLG---------   78 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~~~~---------v~~~~~---------   78 (369)
                      .++.||+|+|+ |.+|...+..++..|.  +|..+|++.. ...+.++.-......         ...+..         
T Consensus       188 v~~~kV~ViG~-G~iG~~aa~~a~~lGa--~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~  264 (405)
T 4dio_A          188 VPAAKIFVMGA-GVAGLQAIATARRLGA--VVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVK  264 (405)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhh
Confidence            45689999999 9999999999998887  8999999872 233333321000000         001110         


Q ss_pred             -CCChhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           79 -QPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        79 -t~dl~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                       ..++.+++++||+||.++..|-++.- .  ++      -+   +.++...|.++|+.++
T Consensus       265 ~~~~l~e~l~~aDVVI~tvlipg~~ap-~--Lv------t~---emv~~Mk~GsVIVDvA  312 (405)
T 4dio_A          265 QAALVAEHIAKQDIVITTALIPGRPAP-R--LV------TR---EMLDSMKPGSVVVDLA  312 (405)
T ss_dssp             HHHHHHHHHHTCSEEEECCCCSSSCCC-C--CB------CH---HHHTTSCTTCEEEETT
T ss_pred             hHhHHHHHhcCCCEEEECCcCCCCCCC-E--Ee------cH---HHHhcCCCCCEEEEEe
Confidence             12567889999999998876632210 0  00      11   3333344888887776

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=95.41  E-value=0.0092  Score=59.91  Aligned_cols=70  Identities=21%  Similarity=0.280  Sum_probs=46.6

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCC---hhh-hcCCCcEEEE
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ---LEN-ALTGMDLVII   94 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~d---l~~-al~~ADiVii   94 (369)
                      +.|||.|+|+ |.+|++++..|...++  +++++|.++..  ...+.+.....-+.+.  .++   |++ .+++||++|.
T Consensus         2 ~~M~iiI~G~-G~vG~~la~~L~~~~~--~v~vId~d~~~--~~~~~~~~~~~~i~Gd--~~~~~~L~~Agi~~ad~~ia   74 (461)
T 4g65_A            2 NAMKIIILGA-GQVGGTLAENLVGENN--DITIVDKDGDR--LRELQDKYDLRVVNGH--ASHPDVLHEAGAQDADMLVA   74 (461)
T ss_dssp             CCEEEEEECC-SHHHHHHHHHTCSTTE--EEEEEESCHHH--HHHHHHHSSCEEEESC--TTCHHHHHHHTTTTCSEEEE
T ss_pred             CcCEEEEECC-CHHHHHHHHHHHHCCC--CEEEEECCHHH--HHHHHHhcCcEEEEEc--CCCHHHHHhcCCCcCCEEEE
Confidence            5799999999 9999999999998888  99999998621  1223221101122221  122   333 3699999887


Q ss_pred             c
Q 017551           95 P   95 (369)
Q Consensus        95 ~   95 (369)
                      +
T Consensus        75 ~   75 (461)
T 4g65_A           75 V   75 (461)
T ss_dssp             C
T ss_pred             E
Confidence            5

>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*

Probab=95.41  E-value=0.049  Score=54.97  Aligned_cols=67  Identities=13%  Similarity=0.200  Sum_probs=44.0

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhC------CCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKIN------PLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLV   92 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~------~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiV   92 (369)
                      +||+|||. |.+|.+++..|...      ++  ++++.+...  ....+.+..-.....  .    ..++.+++++||+|
T Consensus        55 KkIgIIGl-GsMG~AmA~nLr~s~~~~g~G~--~ViVg~r~~sks~e~A~e~G~~v~d~--t----a~s~aEAa~~ADVV  125 (525)
T 3fr7_A           55 KQIGVIGW-GSQGPAQAQNLRDSLAEAKSDI--VVKIGLRKGSKSFDEARAAGFTEESG--T----LGDIWETVSGSDLV  125 (525)
T ss_dssp             SEEEEECC-TTHHHHHHHHHHHHHHHTTCCC--EEEEEECTTCSCHHHHHHTTCCTTTT--C----EEEHHHHHHHCSEE
T ss_pred             CEEEEEeE-hHHHHHHHHHHHhcccccCCCC--EEEEEeCCchhhHHHHHHCCCEEecC--C----CCCHHHHHhcCCEE
Confidence            69999999 99999999999887      76  766555543  222222221110000  0    12457899999999


Q ss_pred             EEcC
Q 017551           93 IIPA   96 (369)
Q Consensus        93 ii~a   96 (369)
                      |++.
T Consensus       126 ILaV  129 (525)
T 3fr7_A          126 LLLI  129 (525)
T ss_dssp             EECS
T ss_pred             EECC
Confidence            9984

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=95.38  E-value=0.093  Score=52.37  Aligned_cols=116  Identities=21%  Similarity=0.267  Sum_probs=70.1

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEE-eCCCChhhhc-------CC-Cc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQLENAL-------TG-MD   90 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~-~~t~dl~~al-------~~-AD   90 (369)
                      ...+.|+||+|++|..++..|+..+.  +|++.|.+.......++.......-+... +...+.++.+       -+ .|
T Consensus       213 gk~~LVTGgsgGIG~aiA~~La~~Ga--~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id  290 (454)
T 3u0b_A          213 GKVAVVTGAARGIGATIAEVFARDGA--TVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVD  290 (454)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCS
T ss_pred             CCEEEEeCCchHHHHHHHHHHHHCCC--EEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCce
Confidence            45899999999999999999999987  89999986522211112111100111111 1112222222       23 99


Q ss_pred             EEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhhC---CCeEEEEec
Q 017551           91 LVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKCC---PNATVNLIS  137 (369)
Q Consensus        91 iVii~ag~p~k~---g~~r---~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~t  137 (369)
                      +||..||+....   .++.   ...+..|+.-...+.+.+....   +.+.|+++|
T Consensus       291 ~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iS  346 (454)
T 3u0b_A          291 ILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLS  346 (454)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEEC
T ss_pred             EEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEe
Confidence            999999986432   2332   3456778777777777766542   456677775

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=95.37  E-value=0.025  Score=55.17  Aligned_cols=77  Identities=22%  Similarity=0.170  Sum_probs=52.9

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch-hHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~-g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      .+..+|+|+|+ |.+|+.++..++..|.  +|..+|.+... ..+.+..  .....+. .....++.+.++++|+||.+.
T Consensus       166 l~g~~V~ViG~-G~iG~~~a~~a~~~Ga--~V~~~d~~~~~l~~~~~~~--g~~~~~~-~~~~~~l~~~l~~aDvVi~~~  239 (377)
T 2vhw_A          166 VEPADVVVIGA-GTAGYNAARIANGMGA--TVTVLDINIDKLRQLDAEF--CGRIHTR-YSSAYELEGAVKRADLVIGAV  239 (377)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHT--TTSSEEE-ECCHHHHHHHHHHCSEEEECC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHHhc--CCeeEec-cCCHHHHHHHHcCCCEEEECC
Confidence            45679999999 9999999999998887  89999997622 1222211  1111111 111235667889999999998


Q ss_pred             CCCC
Q 017551           97 GVPR  100 (369)
Q Consensus        97 g~p~  100 (369)
                      +.|.
T Consensus       240 ~~p~  243 (377)
T 2vhw_A          240 LVPG  243 (377)
T ss_dssp             CCTT
T ss_pred             CcCC
Confidence            8774

>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A

Probab=95.36  E-value=0.06  Score=54.30  Aligned_cols=133  Identities=13%  Similarity=0.194  Sum_probs=75.1

Q ss_pred             CCCEEEEEcCCCccHHH-HHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           19 AGFKVAILGAAGGIGQP-LAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~-la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      +.+||.|||. |..|.+ +|..|+..|.  +|...|..... ....|...    .+..+.+ .+ .+.+.++|+||.+.|
T Consensus        21 ~~~~v~viGi-G~sG~s~~A~~l~~~G~--~V~~~D~~~~~-~~~~l~~~----gi~~~~g-~~-~~~~~~~d~vV~Spg   90 (494)
T 4hv4_A           21 RVRHIHFVGI-GGAGMGGIAEVLANEGY--QISGSDLAPNS-VTQHLTAL----GAQIYFH-HR-PENVLDASVVVVSTA   90 (494)
T ss_dssp             -CCEEEEETT-TSTTHHHHHHHHHHTTC--EEEEECSSCCH-HHHHHHHT----TCEEESS-CC-GGGGTTCSEEEECTT
T ss_pred             cCCEEEEEEE-cHhhHHHHHHHHHhCCC--eEEEEECCCCH-HHHHHHHC----CCEEECC-CC-HHHcCCCCEEEECCC
Confidence            3469999999 999985 8999999998  99999987522 12224332    2233333 23 356889999999988


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC--ChhHHHHHHHHHhCCCCCCcEEE
Q 017551           98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN--STVPIAAEVFKKAGTYDPKKLLG  164 (369)
Q Consensus        98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~--~~t~i~ae~~~~~~~~~~~kviG  164 (369)
                      +|...-+ ......++++++.++ +.+.+......+|-+|--.+  +++.+++.+|+.. |+++.-++|
T Consensus        91 i~~~~p~-~~~a~~~gi~v~~~~-e~l~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~-g~~~~~~~g  156 (494)
T 4hv4_A           91 ISADNPE-IVAAREARIPVIRRA-EMLAELMRYRHGIAVAGTHGKTTTTAMLSSIYAEA-GLDPTFVNG  156 (494)
T ss_dssp             SCTTCHH-HHHHHHTTCCEEEHH-HHHHHHHTTSEEEEEECSSSHHHHHHHHHHHHHHT-TCCCEEEEE
T ss_pred             CCCCCHH-HHHHHHCCCCEEcHH-HHHHHHhcCCCEEEEecCCChHHHHHHHHHHHHhc-CCCCEEEEC
Confidence            8753211 111112333433221 11112222233455554444  5667777777664 454433333

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=95.33  E-value=0.094  Score=54.34  Aligned_cols=113  Identities=14%  Similarity=0.138  Sum_probs=61.3

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeC---------CC--chhHHHHhhcccCCCeEEEE-eCCCChhhhc-
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV---------VN--TPGVTADISHMDTGAVVRGF-LGQPQLENAL-   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~---------~~--~~g~~~dL~~~~~~~~v~~~-~~t~dl~~al-   86 (369)
                      .+.+.|+||+|+||..++..|+..|.  .|++.|.         +.  ....+.++....  ..+... +...+.++.+ 
T Consensus        19 gk~~lVTGas~GIG~aiA~~La~~Ga--~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~D~~d~~~~~~~~~   94 (613)
T 3oml_A           19 GRVAVVTGAGAGLGREYALLFAERGA--KVVVNDLGGTHSGDGASQRAADIVVDEIRKAG--GEAVADYNSVIDGAKVIE   94 (613)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC--EEEEC--------------CHHHHHHHHHHTT--CCEEECCCCGGGHHHHHC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCcccccccCCHHHHHHHHHHHHHhC--CeEEEEeCCHHHHHHHHH
Confidence            45788999999999999999999997  9999987         22  222333343221  122211 1112222333 


Q ss_pred             ------CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHH----HHHhhhCCCeEEEEec
Q 017551           87 ------TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLC----EGIAKCCPNATVNLIS  137 (369)
Q Consensus        87 ------~~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i~~~i~----~~i~~~~p~a~viv~t  137 (369)
                            ...|++|..||+....   .++.   ...+..|+.-...+.    +.+.+. ..+.||++|
T Consensus        95 ~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~-~~g~IV~is  160 (613)
T 3oml_A           95 TAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQ-NYGRIIMTS  160 (613)
T ss_dssp             ----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TCEEEEEEC
T ss_pred             HHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEC
Confidence                  3679999999975432   2232   334556655444444    444443 346677765

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=95.32  E-value=0.04  Score=51.73  Aligned_cols=97  Identities=20%  Similarity=0.254  Sum_probs=63.8

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      -+.++|.|||+ |.+|+.++..++..+.  +|..+|.+.....  .+...  ...  ... ..++.+.+++||+|+.+..
T Consensus       155 l~g~~v~IiG~-G~iG~~~a~~l~~~G~--~V~~~d~~~~~~~--~~~~~--g~~--~~~-~~~l~~~l~~aDvVi~~~p  224 (300)
T 2rir_A          155 IHGSQVAVLGL-GRTGMTIARTFAALGA--NVKVGARSSAHLA--RITEM--GLV--PFH-TDELKEHVKDIDICINTIP  224 (300)
T ss_dssp             STTSEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESSHHHHH--HHHHT--TCE--EEE-GGGHHHHSTTCSEEEECCS
T ss_pred             CCCCEEEEEcc-cHHHHHHHHHHHHCCC--EEEEEECCHHHHH--HHHHC--CCe--EEc-hhhHHHHhhCCCEEEECCC
Confidence            45679999999 9999999999998886  9999998752211  11111  112  111 2467788999999999854


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec-CCCCC
Q 017551           98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS-NPVNS  142 (369)
Q Consensus        98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t-NPv~~  142 (369)
                      .    ++-       |.       ..+....|.+++++++ +|.++
T Consensus       225 ~----~~i-------~~-------~~~~~mk~g~~lin~a~g~~~~  252 (300)
T 2rir_A          225 S----MIL-------NQ-------TVLSSMTPKTLILDLASRPGGT  252 (300)
T ss_dssp             S----CCB-------CH-------HHHTTSCTTCEEEECSSTTCSB
T ss_pred             h----hhh-------CH-------HHHHhCCCCCEEEEEeCCCCCc
Confidence            2    210       10       1233344788888886 67665

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=95.32  E-value=0.017  Score=53.08  Aligned_cols=108  Identities=18%  Similarity=0.188  Sum_probs=66.5

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCC------hhhhcCCCcEE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ------LENALTGMDLV   92 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~d------l~~al~~ADiV   92 (369)
                      .+.+.|+||+++||..++..|+..|.  +|++.|++....     ... ...++.... .-+|      ..+.+..-|++
T Consensus        11 GK~alVTGas~GIG~aia~~la~~Ga--~Vv~~~~~~~~~-----~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiL   82 (242)
T 4b79_A           11 GQQVLVTGGSSGIGAAIAMQFAELGA--EVVALGLDADGV-----HAP-RHPRIRREELDITDSQRLQRLFEALPRLDVL   82 (242)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSTTST-----TSC-CCTTEEEEECCTTCHHHHHHHHHHCSCCSEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHH-----hhh-hcCCeEEEEecCCCHHHHHHHHHhcCCCCEE
Confidence            45888999999999999999999998  999999986211     000 011222211 1112      23557789999


Q ss_pred             EEcCCCCCCC-CCC---HHHHHHHHHH----HHHHHHHHHhhhCCCeEEEEec
Q 017551           93 IIPAGVPRKP-GMT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        93 ii~ag~p~k~-g~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      |..||+.+.. ..+   ....+..|+.    ..+...+.+++.  .+.||+++
T Consensus        83 VNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~--~G~IVnis  133 (242)
T 4b79_A           83 VNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQR--GGSILNIA  133 (242)
T ss_dssp             EECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--CEEEEEEC
T ss_pred             EECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCeEEEEe
Confidence            9999976422 122   2334455543    344445555443  47788775

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=95.30  E-value=0.049  Score=51.15  Aligned_cols=57  Identities=21%  Similarity=0.403  Sum_probs=45.7

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      -+..+++|||+++-+|.+++..|...+.  .+.+.+..                       +.++++.++.||+||.+.|
T Consensus       159 l~Gk~vvVIG~s~iVG~p~A~lL~~~gA--tVtv~hs~-----------------------t~~L~~~~~~ADIVI~Avg  213 (285)
T 3l07_A          159 TEGAYAVVVGASNVVGKPVSQLLLNAKA--TVTTCHRF-----------------------TTDLKSHTTKADILIVAVG  213 (285)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTC--EEEEECTT-----------------------CSSHHHHHTTCSEEEECCC
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHHCCC--eEEEEeCC-----------------------chhHHHhcccCCEEEECCC
Confidence            3567999999955689999999998876  66666431                       3578899999999999987


Q ss_pred             CC
Q 017551           98 VP   99 (369)
Q Consensus        98 ~p   99 (369)
                      .|
T Consensus       214 ~p  215 (285)
T 3l07_A          214 KP  215 (285)
T ss_dssp             CT
T ss_pred             CC
Confidence            65

>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1

Probab=95.29  E-value=0.017  Score=54.76  Aligned_cols=60  Identities=23%  Similarity=0.252  Sum_probs=46.5

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      ..++|+|||. |.||+.++..+...+.  +|..||.+.. .   +    ..    .   ...++++.++.||+|++..
T Consensus       123 ~g~~vgIIG~-G~IG~~~A~~l~~~G~--~V~~~dr~~~-~---~----~~----~---~~~~l~ell~~aDvV~l~~  182 (303)
T 1qp8_A          123 QGEKVAVLGL-GEIGTRVGKILAALGA--QVRGFSRTPK-E---G----PW----R---FTNSLEEALREARAAVCAL  182 (303)
T ss_dssp             TTCEEEEESC-STHHHHHHHHHHHTTC--EEEEECSSCC-C---S----SS----C---CBSCSHHHHTTCSEEEECC
T ss_pred             CCCEEEEEcc-CHHHHHHHHHHHHCCC--EEEEECCCcc-c---c----Cc----c---cCCCHHHHHhhCCEEEEeC
Confidence            4579999999 9999999999988787  8999998653 1   0    10    0   1235678899999999984

>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*

Probab=95.25  E-value=0.022  Score=58.13  Aligned_cols=64  Identities=23%  Similarity=0.340  Sum_probs=48.2

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      ..++|+|||. |.||+.++..+...+.  +|+.||.+.....+.++.       +..   . ++.+.+++||+|+++.
T Consensus       141 ~g~~vgIIG~-G~IG~~vA~~l~~~G~--~V~~~d~~~~~~~a~~~g-------~~~---~-~l~e~~~~aDvV~l~~  204 (529)
T 1ygy_A          141 FGKTVGVVGL-GRIGQLVAQRIAAFGA--YVVAYDPYVSPARAAQLG-------IEL---L-SLDDLLARADFISVHL  204 (529)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTC--EEEEECTTSCHHHHHHHT-------CEE---C-CHHHHHHHCSEEEECC
T ss_pred             CCCEEEEEee-CHHHHHHHHHHHhCCC--EEEEECCCCChhHHHhcC-------cEE---c-CHHHHHhcCCEEEECC
Confidence            3579999999 9999999999998876  999999876322222221       111   1 4678899999999985

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=95.23  E-value=0.03  Score=55.06  Aligned_cols=94  Identities=19%  Similarity=0.241  Sum_probs=60.3

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      ..++|+|||. |.||+.++..++..+.  +|+.||... ......++.       +..   ..++++.++.||+|++.. 
T Consensus       190 ~gktvGIIGl-G~IG~~vA~~l~a~G~--~V~~~d~~~~~~~~~~~~G-------~~~---~~~l~ell~~aDvV~l~~-  255 (393)
T 2nac_A          190 EAMHVGTVAA-GRIGLAVLRRLAPFDV--HLHYTDRHRLPESVEKELN-------LTW---HATREDMYPVCDVVTLNC-  255 (393)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTC--EEEEECSSCCCHHHHHHHT-------CEE---CSSHHHHGGGCSEEEECS-
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHhCCC--EEEEEcCCccchhhHhhcC-------cee---cCCHHHHHhcCCEEEEec-
Confidence            4579999999 9999999999987776  999999875 222222111       111   135778899999999984 


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 017551           98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                       |..+. ++ .++  |    .   +.+...-|++++|+++-
T Consensus       256 -Plt~~-t~-~li--~----~---~~l~~mk~gailIN~aR  284 (393)
T 2nac_A          256 -PLHPE-TE-HMI--N----D---ETLKLFKRGAYIVNTAR  284 (393)
T ss_dssp             -CCCTT-TT-TCB--S----H---HHHTTSCTTEEEEECSC
T ss_pred             -CCchH-HH-HHh--h----H---HHHhhCCCCCEEEECCC
Confidence             32221 11 111  1    1   22333447898888863

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=95.23  E-value=0.07  Score=53.26  Aligned_cols=93  Identities=18%  Similarity=0.180  Sum_probs=61.8

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      -..++|+|+|. |.||+.++..+...|.  +|..+|++....... ..+   ..  ..    .+++++++.||+|+.+.|
T Consensus       245 L~GKTVgVIG~-G~IGr~vA~~lrafGa--~Viv~d~dp~~a~~A-~~~---G~--~v----v~LeElL~~ADIVv~atg  311 (464)
T 3n58_A          245 MAGKVAVVCGY-GDVGKGSAQSLAGAGA--RVKVTEVDPICALQA-AMD---GF--EV----VTLDDAASTADIVVTTTG  311 (464)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSHHHHHHH-HHT---TC--EE----CCHHHHGGGCSEEEECCS
T ss_pred             ccCCEEEEECc-CHHHHHHHHHHHHCCC--EEEEEeCCcchhhHH-Hhc---Cc--ee----ccHHHHHhhCCEEEECCC
Confidence            44579999999 9999999999987776  999999976221111 111   11  11    246789999999998754


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 017551           98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  140 (369)
Q Consensus        98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv  140 (369)
                      .+   +.            +.  .+.+...-|.+++++++...
T Consensus       312 t~---~l------------I~--~e~l~~MK~GAILINvGRgd  337 (464)
T 3n58_A          312 NK---DV------------IT--IDHMRKMKDMCIVGNIGHFD  337 (464)
T ss_dssp             SS---SS------------BC--HHHHHHSCTTEEEEECSSST
T ss_pred             Cc---cc------------cC--HHHHhcCCCCeEEEEcCCCC
Confidence            22   11            10  12333345899999987654

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=95.23  E-value=0.063  Score=50.95  Aligned_cols=114  Identities=13%  Similarity=0.099  Sum_probs=63.7

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcc----cCCCeEEEEe-CCCC---hhhhcC---
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHM----DTGAVVRGFL-GQPQ---LENALT---   87 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~----~~~~~v~~~~-~t~d---l~~al~---   87 (369)
                      ++|.|+||+|+||..++..|+..+.  ++++++.+.  .......+...    ....++..+. .-+|   +.++++   
T Consensus         3 k~vlVTGas~GIG~ala~~L~~~G~--~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            3 TVVLITGCSSGIGLHLAVRLASDPS--QSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTT--CCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--ceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            4789999999999999999999986  566666543  22111111110    0112333322 1122   333444   


Q ss_pred             --CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHH----HhhhCCCeEEEEec
Q 017551           88 --GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEG----IAKCCPNATVNLIS  137 (369)
Q Consensus        88 --~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~t  137 (369)
                        ..|++|..||.....   ..+   ....+..|+.-...+.+.    +.+. ..+.|+++|
T Consensus        81 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-~~g~IV~is  141 (327)
T 1jtv_A           81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRR-GSGRVLVTG  141 (327)
T ss_dssp             TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEE
T ss_pred             cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEEC
Confidence              489999999875321   122   234556676555554444    4443 346666665

>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}

Probab=95.20  E-value=0.035  Score=50.19  Aligned_cols=56  Identities=25%  Similarity=0.363  Sum_probs=42.4

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEE-EEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhc-CCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVL-HLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL-TGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el-~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al-~~ADiVii~a   96 (369)
                      |||+|||+ |.+|+.++..+...+.  +| .++|.+. ..     ..        .   .+|+++.+ .++|+|+++.
T Consensus         1 m~vgiIG~-G~mG~~~~~~l~~~g~--~lv~v~d~~~-~~-----~~--------~---~~~~~~l~~~~~DvVv~~~   58 (236)
T 2dc1_A            1 MLVGLIGY-GAIGKFLAEWLERNGF--EIAAILDVRG-EH-----EK--------M---VRGIDEFLQREMDVAVEAA   58 (236)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC--EEEEEECSSC-CC-----TT--------E---ESSHHHHTTSCCSEEEECS
T ss_pred             CEEEEECC-CHHHHHHHHHHhcCCC--EEEEEEecCc-ch-----hh--------h---cCCHHHHhcCCCCEEEECC
Confidence            58999999 9999999988886665  76 6999874 11     00        2   24677777 6999999984

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=95.20  E-value=0.033  Score=52.36  Aligned_cols=59  Identities=20%  Similarity=0.435  Sum_probs=46.7

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      .-+..+++|||+++.+|.+++..|...+-  .+.+++..                       +.++++.+++||+||.+.
T Consensus       156 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gA--tVtv~hs~-----------------------t~~L~~~~~~ADIVI~Av  210 (288)
T 1b0a_A          156 DTFGLNAVVIGASNIVGRPMSMELLLAGC--TTTVTHRF-----------------------TKNLRHHVENADLLIVAV  210 (288)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTC--EEEEECSS-----------------------CSCHHHHHHHCSEEEECS
T ss_pred             CCCCCEEEEECCChHHHHHHHHHHHHCCC--eEEEEeCC-----------------------chhHHHHhccCCEEEECC
Confidence            34567999999944589999999998775  77777521                       357888999999999998


Q ss_pred             CCCC
Q 017551           97 GVPR  100 (369)
Q Consensus        97 g~p~  100 (369)
                      |.|.
T Consensus       211 g~p~  214 (288)
T 1b0a_A          211 GKPG  214 (288)
T ss_dssp             CCTT
T ss_pred             CCcC
Confidence            8763

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=95.20  E-value=0.03  Score=54.58  Aligned_cols=96  Identities=20%  Similarity=0.318  Sum_probs=61.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP   99 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p   99 (369)
                      .++|+|||. |.||+.++..++..+.  +|..||.......+.+..       +..    .++++.++.||+|++..  |
T Consensus       176 gktvGIIGl-G~IG~~vA~~l~~fG~--~V~~~d~~~~~~~~~~~g-------~~~----~~l~ell~~aDvV~l~~--P  239 (365)
T 4hy3_A          176 GSEIGIVGF-GDLGKALRRVLSGFRA--RIRVFDPWLPRSMLEENG-------VEP----ASLEDVLTKSDFIFVVA--A  239 (365)
T ss_dssp             SSEEEEECC-SHHHHHHHHHHTTSCC--EEEEECSSSCHHHHHHTT-------CEE----CCHHHHHHSCSEEEECS--C
T ss_pred             CCEEEEecC-CcccHHHHHhhhhCCC--EEEEECCCCCHHHHhhcC-------eee----CCHHHHHhcCCEEEEcC--c
Confidence            579999999 9999999998876666  999999875222222111       111    35788999999999984  3


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec--CCCCC
Q 017551          100 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS--NPVNS  142 (369)
Q Consensus       100 ~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t--NPv~~  142 (369)
                      ..+. ++ .++  |       .+.+...-|.+++|+++  .++|.
T Consensus       240 lt~~-T~-~li--~-------~~~l~~mk~gailIN~aRG~~vde  273 (365)
T 4hy3_A          240 VTSE-NK-RFL--G-------AEAFSSMRRGAAFILLSRADVVDF  273 (365)
T ss_dssp             SSCC-----CC--C-------HHHHHTSCTTCEEEECSCGGGSCH
T ss_pred             CCHH-HH-hhc--C-------HHHHhcCCCCcEEEECcCCchhCH
Confidence            2221 11 111  1       12334445889999986  44443

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=95.16  E-value=0.035  Score=52.90  Aligned_cols=65  Identities=22%  Similarity=0.238  Sum_probs=48.3

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeC-CCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV-VNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~-~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      ..++|+|||. |.||+.++..++..+.  +|+.||. +.....+.++.     .  ..   ..++++.+++||+|++..
T Consensus       145 ~g~~vgIIG~-G~IG~~~A~~l~~~G~--~V~~~d~~~~~~~~~~~~g-----~--~~---~~~l~ell~~aDvVil~~  210 (320)
T 1gdh_A          145 DNKTLGIYGF-GSIGQALAKRAQGFDM--DIDYFDTHRASSSDEASYQ-----A--TF---HDSLDSLLSVSQFFSLNA  210 (320)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTC--EEEEECSSCCCHHHHHHHT-----C--EE---CSSHHHHHHHCSEEEECC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCC--EEEEECCCCcChhhhhhcC-----c--EE---cCCHHHHHhhCCEEEEec
Confidence            4579999999 9999999999987776  9999999 76332222211     1  11   235778899999999984

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=95.14  E-value=0.065  Score=52.71  Aligned_cols=102  Identities=12%  Similarity=0.153  Sum_probs=62.4

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcccCCCeEEE---------Ee--CCC------
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRG---------FL--GQP------   80 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~~~~v~~---------~~--~t~------   80 (369)
                      ++.||+|+|+ |.+|...+..++..|.  +|..+|++.. ...+.++.. .. ..+..         +.  .+.      
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga--~V~v~D~~~~~~~~~~~lGa-~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~  245 (401)
T 1x13_A          171 PPAKVMVIGA-GVAGLAAIGAANSLGA--IVRAFDTRPEVKEQVQSMGA-EF-LELDFKEEAGSGDGYAKVMSDAFIKAE  245 (401)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCGGGHHHHHHTTC-EE-CCC--------CCHHHHHHSHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHcCC-EE-EEecccccccccccchhhccHHHHHHH
Confidence            4679999999 9999999999988886  8999999862 222333311 00 00000         00  000      


Q ss_pred             --ChhhhcCCCcEEEEcCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC
Q 017551           81 --QLENALTGMDLVIIPAGVPR--KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP  139 (369)
Q Consensus        81 --dl~~al~~ADiVii~ag~p~--k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP  139 (369)
                        ++.+.++++|+||.+++.|-  .|..-           -.+   .++...|.++|+.+++|
T Consensus       246 ~~~l~e~~~~aDvVI~~~~~pg~~ap~li-----------~~~---~l~~mk~g~vIVdva~~  294 (401)
T 1x13_A          246 MELFAAQAKEVDIIVTTALIPGKPAPKLI-----------TRE---MVDSMKAGSVIVDLAAQ  294 (401)
T ss_dssp             HHHHHHHHHHCSEEEECCCCTTSCCCCCB-----------CHH---HHHTSCTTCEEEETTGG
T ss_pred             HHHHHHHhCCCCEEEECCccCCCCCCeee-----------CHH---HHhcCCCCcEEEEEcCC
Confidence              25677789999999976652  12210           012   23333478889888876

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=95.13  E-value=0.034  Score=55.96  Aligned_cols=72  Identities=19%  Similarity=0.090  Sum_probs=46.1

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCC--CcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCC-CC----hhhhcCCCcEE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPL--VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ-PQ----LENALTGMDLV   92 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~--~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t-~d----l~~al~~ADiV   92 (369)
                      ++||+|||+ |.||+.++..|++++-  ..+|++.|.+.......+...    .++....-+ .+    +.+.+++.|+|
T Consensus        13 ~~rVlIIGa-GgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g----~~~~~~~Vdadnv~~~l~aLl~~~DvV   87 (480)
T 2ph5_A           13 KNRFVILGF-GCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYG----VSFKLQQITPQNYLEVIGSTLEENDFL   87 (480)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHT----CEEEECCCCTTTHHHHTGGGCCTTCEE
T ss_pred             CCCEEEECc-CHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcC----CceeEEeccchhHHHHHHHHhcCCCEE
Confidence            469999999 9999999999998763  368999998763222222211    122221111 22    33456677999


Q ss_pred             EEcC
Q 017551           93 IIPA   96 (369)
Q Consensus        93 ii~a   96 (369)
                      |.++
T Consensus        88 IN~s   91 (480)
T 2ph5_A           88 IDVS   91 (480)
T ss_dssp             EECC
T ss_pred             EECC
Confidence            9854

>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}

Probab=95.13  E-value=0.026  Score=53.81  Aligned_cols=69  Identities=19%  Similarity=0.363  Sum_probs=46.8

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcC--CCcEEEEcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLVIIPA   96 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~--~ADiVii~a   96 (369)
                      +++||+|||+ |.+|..++..+...+-+.-+.++|.+.....  .+.... .  +..+   +|+++.++  ++|+|+++.
T Consensus         3 ~~~rvgiiG~-G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~--~~a~~~-g--~~~~---~~~~~~l~~~~~D~V~i~t   73 (344)
T 3euw_A            3 LTLRIALFGA-GRIGHVHAANIAANPDLELVVIADPFIEGAQ--RLAEAN-G--AEAV---ASPDEVFARDDIDGIVIGS   73 (344)
T ss_dssp             CCEEEEEECC-SHHHHHHHHHHHHCTTEEEEEEECSSHHHHH--HHHHTT-T--CEEE---SSHHHHTTCSCCCEEEECS
T ss_pred             CceEEEEECC-cHHHHHHHHHHHhCCCcEEEEEECCCHHHHH--HHHHHc-C--Ccee---CCHHHHhcCCCCCEEEEeC
Confidence            3579999999 9999999998887754333448998763221  122111 1  3333   57788887  899999984

>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}

Probab=95.13  E-value=0.029  Score=53.31  Aligned_cols=71  Identities=10%  Similarity=0.070  Sum_probs=46.1

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcC--CCcEEEEc
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLVIIP   95 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~--~ADiVii~   95 (369)
                      .+++||+|||+ |.+|..++..+...+.+.-+.++|.+......  +......+  +.   .+|+++.+.  ++|+|+++
T Consensus         3 m~~~~igiiG~-G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~--~~~~~~~~--~~---~~~~~~ll~~~~~D~V~i~   74 (330)
T 3e9m_A            3 LDKIRYGIMST-AQIVPRFVAGLRESAQAEVRGIASRRLENAQK--MAKELAIP--VA---YGSYEELCKDETIDIIYIP   74 (330)
T ss_dssp             CCCEEEEECSC-CTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHH--HHHHTTCC--CC---BSSHHHHHHCTTCSEEEEC
T ss_pred             CCeEEEEEECc-hHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHH--HHHHcCCC--ce---eCCHHHHhcCCCCCEEEEc
Confidence            35679999999 99999999888876543334488988632221  11111001  11   357777776  89999997


Q ss_pred             C
Q 017551           96 A   96 (369)
Q Consensus        96 a   96 (369)
                      .
T Consensus        75 t   75 (330)
T 3e9m_A           75 T   75 (330)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=95.11  E-value=0.15  Score=51.68  Aligned_cols=117  Identities=18%  Similarity=0.132  Sum_probs=71.7

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-----hhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC-
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-----PGVTADISHMDTGAVVRGFL-GQPQ---LENALT-   87 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-----~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~-   87 (369)
                      .+..+|.|+||+|++|..++..|...+. ..|+|.+.+..     .....+|...  ..++..+. .-+|   +.+.++ 
T Consensus       257 ~~~~~vLITGgtGgIG~~lA~~La~~G~-~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~  333 (511)
T 2z5l_A          257 QPSGTVLITGGMGAIGRRLARRLAAEGA-ERLVLTSRRGPEAPGAAELAEELRGH--GCEVVHAACDVAERDALAALVTA  333 (511)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTC-SEEEEEESSGGGSTTHHHHHHHHHTT--TCEEEEEECCSSCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCC-cEEEEEecCCcccHHHHHHHHHHHhc--CCEEEEEEeCCCCHHHHHHHHhc
Confidence            3457999999999999999999988875 35899998752     1222334332  24455432 1233   334444 


Q ss_pred             -CCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           88 -GMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        88 -~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                       ..|+||.+||+....   ..+.   ...+..|+.....+.+.+....+...++++|
T Consensus       334 ~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~S  390 (511)
T 2z5l_A          334 YPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFS  390 (511)
T ss_dssp             SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEE
T ss_pred             CCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEe
Confidence             389999999975432   1222   3345667777777776665441333455554

>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}

Probab=95.10  E-value=0.037  Score=51.87  Aligned_cols=67  Identities=12%  Similarity=0.228  Sum_probs=45.0

Q ss_pred             CCCEEEEEcCCCccHHH-HHHHHHhCCCCcEEEEEeCCCchh--HHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551           19 AGFKVAILGAAGGIGQP-LAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP   95 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~-la~~l~~~~~~~el~L~D~~~~~g--~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~   95 (369)
                      +++||+|||+ |.+|.. ++..+...+.+.-+.++|.+....  .+..+.     ..  .   .+|+++.++++|+|+++
T Consensus         5 ~~~~igiIG~-G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~-----~~--~---~~~~~~ll~~~D~V~i~   73 (308)
T 3uuw_A            5 KNIKMGMIGL-GSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDYR-----IM--P---FDSIESLAKKCDCIFLH   73 (308)
T ss_dssp             CCCEEEEECC-SHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHHT-----CC--B---CSCHHHHHTTCSEEEEC
T ss_pred             ccCcEEEEec-CHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcC-----CC--C---cCCHHHHHhcCCEEEEe
Confidence            4579999999 999996 777777655433344899986322  222111     11  1   35778888899999997


Q ss_pred             C
Q 017551           96 A   96 (369)
Q Consensus        96 a   96 (369)
                      .
T Consensus        74 t   74 (308)
T 3uuw_A           74 S   74 (308)
T ss_dssp             C
T ss_pred             C
Confidence            4

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	369
d1mlda1	144	c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus s	2e-44
d1mlda2	169	d.162.1.1 (A:145-313) Malate dehydrogenase {Pig (S	3e-40
d2cmda2	167	d.162.1.1 (A:146-312) Malate dehydrogenase {Escher	5e-38
d2cmda1	145	c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichi	1e-36
d7mdha1	175	c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (	1e-31
d1y7ta1	154	c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus th	7e-31
d1ojua1	142	c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon	1e-30
d1y6ja1	142	c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridi	5e-30
d1llda1	143	c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobac	7e-30
d1o6za1	142	c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon	7e-30
d1a5za1	140	c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermoto	8e-30
d5mdha1	154	c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus s	2e-29
d1guza1	142	c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium	2e-29
d1uxja1	142	c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflex	2e-29
d1t2da1	150	c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria p	7e-28
d1guza2	163	d.162.1.1 (A:143-305) Malate dehydrogenase {Chloro	2e-26
d1ez4a1	146	c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobac	6e-26
d1pzga1	154	c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplas	2e-25
d1ldna1	148	c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus	4e-25
d1uxja2	164	d.162.1.1 (A:144-307) Malate dehydrogenase {Chloro	6e-25
d2ldxa1	159	c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mu	1e-24
d1i0za1	160	c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Ho	6e-24
d1hyea1	145	c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydroge	4e-23
d1hyha1	146	c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydro	5e-23
d5mdha2	179	d.162.1.1 (A:155-333) Malate dehydrogenase {Pig (S	8e-22
d1up7a1	162	c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Ther	7e-20
d1ldma2	169	d.162.1.1 (A:161-329) Lactate dehydrogenase {Dogfi	1e-19
d2ldxa2	172	d.162.1.1 (A:160-331) Lactate dehydrogenase {Mouse	2e-19
d1i0za2	172	d.162.1.1 (A:161-332) Lactate dehydrogenase {Human	5e-19
d1llda2	170	d.162.1.1 (A:150-319) Lactate dehydrogenase {Bifid	8e-19
d1o6za2	161	d.162.1.1 (A:163-330) Malate dehydrogenase {Archae	1e-18
d1hyea2	168	d.162.1.1 (A:146-313) MJ0490, lactate/malate dehyd	1e-18
d1llca2	172	d.162.1.1 (A:165-334) Lactate dehydrogenase {Lacto	2e-18
d1a5za2	172	d.162.1.1 (A:164-333) Lactate dehydrogenase {Therm	3e-18
d1t2da2	165	d.162.1.1 (A:151-315) Lactate dehydrogenase {Malar	3e-18
d1ez4a2	171	d.162.1.1 (A:163-334) Lactate dehydrogenase {Lacto	4e-18
d1hyha2	163	d.162.1.1 (A:167-329) L-2-hydroxyisocapronate dehy	6e-18
d1y6ja2	169	d.162.1.1 (A:149-317) Lactate dehydrogenase {Clost	1e-17
d1s6ya1	169	c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Baci	2e-17
d1u8xx1	167	c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase	2e-17
d7mdha2	188	d.162.1.1 (A:198-385) Malate dehydrogenase {Sorghu	3e-17
d1ldna2	168	d.162.1.1 (A:163-330) Lactate dehydrogenase {Bacil	4e-17
d1y7ta2	173	d.162.1.1 (A:154-332) Malate dehydrogenase {Thermu	3e-16
d1pzga2	174	d.162.1.1 (A:164-334) Lactate dehydrogenase {Toxop	2e-15
d1b8pa2	171	d.162.1.1 (A:159-329) Malate dehydrogenase {Aquasp	3e-15
d1obba1	171	c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermoto	4e-15
d1ojua2	152	d.162.1.1 (A:164-331) Lactate dehydrogenase {Archa	1e-09

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} Length = 144

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score =  148 bits (374), Expect = 2e-44
 Identities = 92/143 (64%), Positives = 115/143 (80%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 81
           KVA+LGA+GGIGQPL++L+K +PLVS L LYD+ +TPGV AD+SH++T A V+G+LG  Q
Sbjct: 2   KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQ 61

Query: 82  LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 141
           L + L G D+V+IPAGVPRKPGMTRDDLFN NA IV TL    A+ CP+A + +ISNPVN
Sbjct: 62  LPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPVN 121

Query: 142 STVPIAAEVFKKAGTYDPKKLLG 164
           ST+PI AEVFKK G Y+P K+ G
Sbjct: 122 STIPITAEVFKKHGVYNPNKIFG 144

>d1mlda2 d.162.1.1 (A:145-313) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} Length = 169

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score =  138 bits (348), Expect = 3e-40
 Identities = 79/148 (53%), Positives = 105/148 (70%)

Query: 165 VTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTN 224
           VT LD+VRAN FVAE+ GLDP  V VPV+GGHAG TI+PL+SQ  P   F Q++   LT 
Sbjct: 1   VTTLDIVRANAFVAELKGLDPARVSVPVIGGHAGKTIIPLISQCTPKVDFPQDQLSTLTG 60

Query: 225 RIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFF 284
           RIQ  GTEVV+AKAGAGSATLSMAYA  +F  + +  + G  GVVEC+FV SQ T+ P+F
Sbjct: 61  RIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLVDAMNGKEGVVECSFVKSQETDCPYF 120

Query: 285 ASKVRLGRQGAEEIFQLGPLNEYESGLF 312
           ++ + LG++G E+   +G ++ +E  + 
Sbjct: 121 STPLLLGKKGIEKNLGIGKISPFEEKMI 148

>d2cmda2 d.162.1.1 (A:146-312) Malate dehydrogenase {Escherichia coli [TaxId: 562]} Length = 167

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  132 bits (332), Expect = 5e-38
 Identities = 80/148 (54%), Positives = 102/148 (68%), Gaps = 1/148 (0%)

Query: 165 VTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTN 224
           VT LD++R+NTFVAE+ G  P +V+VPV+GGH+GVTILPLLSQV     FT++E   LT 
Sbjct: 1   VTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQVPGVS-FTEQEVADLTK 59

Query: 225 RIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFF 284
           RIQN GTEVVEAKAG GSATLSM  AA +F  + +R L+G+ GVVECA+V        FF
Sbjct: 60  RIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFF 119

Query: 285 ASKVRLGRQGAEEIFQLGPLNEYESGLF 312
           +  + LG+ G EE   +G L+ +E    
Sbjct: 120 SQPLLLGKNGVEERKSIGTLSAFEQNAL 147

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} Length = 145

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  127 bits (321), Expect = 1e-36
 Identities = 84/145 (57%), Positives = 103/145 (71%), Gaps = 3/145 (2%)

Query: 22  KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQ 79
           KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+
Sbjct: 2   KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGE 61

Query: 80  PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 139
                AL G D+V+I AGV RKPGM R DLFN+NAGIV+ L + +AK CP A + +I+NP
Sbjct: 62  -DATPALEGADVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNP 120

Query: 140 VNSTVPIAAEVFKKAGTYDPKKLLG 164
           VN+TV IAAEV KKAG YD  KL G
Sbjct: 121 VNTTVAIAAEVLKKAGVYDKNKLFG 145

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

 Score =  115 bits (290), Expect = 1e-31
 Identities = 27/137 (19%), Positives = 47/137 (34%), Gaps = 9/137 (6%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPL-----VSVLHLYDVVNTPGVTADISHMDTGA---VV 73
            +A+ GAAG I   L   +    +        L L     +      ++     +   ++
Sbjct: 26  NIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLL 85

Query: 74  RGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAK-CCPNAT 132
           R              +D  ++    PR PGM R  L +IN  I     + +      N  
Sbjct: 86  REVSIGIDPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVK 145

Query: 133 VNLISNPVNSTVPIAAE 149
           V ++ NP N+   I  +
Sbjct: 146 VLVVGNPCNTNALICLK 162

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 154

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  112 bits (282), Expect = 7e-31
 Identities = 33/149 (22%), Positives = 55/149 (36%), Gaps = 12/149 (8%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHL--YDVVNTPGVTAD------ISHMDTGAVV 73
           +VA+ GAAG IG  L   +    ++         ++  P                   ++
Sbjct: 6   RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL 65

Query: 74  RGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAK-CCPNAT 132
            G       + A    D  ++    PRK GM R DL  +N  I       +A+    +  
Sbjct: 66  AGLEATDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVK 125

Query: 133 VNLISNPVNSTVPIAAEVFKKAGTYDPKK 161
           V ++ NP N+   IA   +K A   +P+ 
Sbjct: 126 VLVVGNPANTNALIA---YKNAPGLNPRN 151

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 142

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score =  112 bits (280), Expect = 1e-30
 Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 7/146 (4%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQ 79
           K+  +GA G +G   A    +N  V  + L D+      G   D++H   G      +  
Sbjct: 2   KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVG 60

Query: 80  PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 139
               + L G +++++ AG+ RKPGMTR DL + NAGI++ + + I +  P + + +++NP
Sbjct: 61  GADYSLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNP 120

Query: 140 VNSTVPIAAEVFKKAGTYDPKKLLGV 165
           ++    I      K       ++ G+
Sbjct: 121 MDVMTYIM----WKESGKPRNEVFGM 142

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} Length = 142

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

 Score =  110 bits (275), Expect = 5e-30
 Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 5/143 (3%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 81
           KVAI+GA G +G   A  M +    + L L DV     +   +        +        
Sbjct: 3   KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG 61

Query: 82  LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 141
             + +   D++++ AG  RKPG TR DL   N  I + + + I K   +  + ++SNPV+
Sbjct: 62  DYSDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPVD 121

Query: 142 STVPIAAEVFKKAGTYDPKKLLG 164
               +     +K       K++G
Sbjct: 122 IITYMI----QKWSGLPVGKVIG 140

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} Length = 143

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

 Score =  110 bits (275), Expect = 7e-30
 Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 8/145 (5%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 79
           K+A++GA G +G  LA       +   + L D+          D+ H  +        G 
Sbjct: 3   KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS 61

Query: 80  PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 139
              E      D+V+I AG  +KPG +R +L      I++ +   + K  PNA   LI+NP
Sbjct: 62  DDPE-ICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNP 120

Query: 140 VNSTVPIAAEVFKKAGTYDPKKLLG 164
           V+    IA  V +K       ++ G
Sbjct: 121 VD----IATHVAQKLTGLPENQIFG 141

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} Length = 142

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

 Score =  110 bits (275), Expect = 7e-30
 Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 10/147 (6%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN----TPGVTADISHMDTGAVVRGFL 77
           KV+++GAAG +G      + +  +   +   D+ +    T G  AD +H    A      
Sbjct: 2   KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNH--GIAYDSNTR 59

Query: 78  GQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137
            +        G D+V+I AG+PR+PG TR DL   NA I+  +   + +   +      S
Sbjct: 60  VRQGGYEDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS 119

Query: 138 NPVNSTVPIAAEVFKKAGTYDPKKLLG 164
           NPV+    +      +AG    ++++G
Sbjct: 120 NPVD----LLNRHLYEAGDRSREQVIG 142

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 140

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  109 bits (274), Expect = 8e-30
 Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 5/143 (3%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 81
           K+ I+G  G +G   A  + +      + L DV         +  +      R       
Sbjct: 2   KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAG 60

Query: 82  LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 141
               L G D+VI+ AGVP+KPG TR  L   NA +++ +   ++K  P++ V +++NPV+
Sbjct: 61  DYADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVD 120

Query: 142 STVPIAAEVFKKAGTYDPKKLLG 164
               +    F K    DP+K+ G
Sbjct: 121 ----VLTYFFLKESGMDPRKVFG 139

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} Length = 154

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score =  109 bits (273), Expect = 2e-29
 Identities = 30/141 (21%), Positives = 53/141 (37%), Gaps = 9/141 (6%)

Query: 22  KVAILGAAGGIGQPLAML-----MKINPLVSVLHLYDVVNTPGVTADISHMDTGAVV--- 73
           +V + GAAG I   L        +       +L L D+    GV   +        +   
Sbjct: 5   RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL 64

Query: 74  RGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATV 133
           +  +   + E A   +D+ I+   +PR+ GM R DL   N  I +     + K    +  
Sbjct: 65  KDVIATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVK 124

Query: 134 NL-ISNPVNSTVPIAAEVFKK 153
            + + NP N+    A++    
Sbjct: 125 VIVVGNPANTNCLTASKSAPS 145

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} Length = 142

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

 Score =  108 bits (271), Expect = 2e-29
 Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 7/146 (4%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 79
           K+ ++GA G +G   A  +    L   L L DVV     G   D+       +    +  
Sbjct: 2   KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTG 60

Query: 80  PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 139
                     D+VII AG+PRKPGMTR+DL   NAGIV+ + + I K   N  + ++SNP
Sbjct: 61  SNDYADTANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNP 120

Query: 140 VNSTVPIAAEVFKKAGTYDPKKLLGV 165
           ++    +A            ++++G+
Sbjct: 121 LDIMTHVA----WVRSGLPKERVIGM 142

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} Length = 142

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

 Score =  108 bits (271), Expect = 2e-29
 Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 6/144 (4%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGFLGQP 80
           K++I+GA G +G   A  +    L  ++ L  V   P G   D+            +   
Sbjct: 3   KISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT 61

Query: 81  QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV 140
                    D++++ +G PRKPGM+R+DL  +NA I R      A   PNA + +++NP+
Sbjct: 62  NNYADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPL 121

Query: 141 NSTVPIAAEVFKKAGTYDPKKLLG 164
           ++   +AAEV      +  ++++G
Sbjct: 122 DAMTYLAAEVSG----FPKERVIG 141

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 150

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  104 bits (261), Expect = 7e-28
 Identities = 45/154 (29%), Positives = 72/154 (46%), Gaps = 11/154 (7%)

Query: 18  AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGF 76
           A   K+ ++G+ G IG  +A L+    L  V+    V N P G   D SH +  A     
Sbjct: 1   APKAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCK 59

Query: 77  LGQPQLENALTGMDLVIIPAGVPRKPGMT-----RDDLFNINAGIVRTLCEGIAKCCPNA 131
           +      + L G D+VI+ AG  + PG +     RDDL  +N  I+  +   I K CPNA
Sbjct: 60  VSGSNTYDDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNA 119

Query: 132 TVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV 165
            + +++NPV+  V +      +       K++G+
Sbjct: 120 FIIVVTNPVDVMVQLL----HQHSGVPKNKIIGL 149

>d1guza2 d.162.1.1 (A:143-305) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} Length = 163

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

 Score =  101 bits (253), Expect = 2e-26
 Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 7/150 (4%)

Query: 167 MLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCS----FTQEETEYL 222
           +LD  R  +F+A  LG+  +D++  V+GGH    +  +                E  + L
Sbjct: 3   VLDAARFRSFIAMELGVSMQDINACVLGGHGDAMVPVVKYTTVAGIPISDLLPAETIDKL 62

Query: 223 TNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELP 282
             R +NGG E+VE     GSA  + A + V+  ++     R                +  
Sbjct: 63  VERTRNGGAEIVEH-LKQGSAFYAPASSVVEMVESI-VLDRKRVLPCAVGLEGQYGIDKT 120

Query: 283 FFASKVRLGRQGAEEIFQLGPLNEYESGLF 312
           F    V+LGR G E+I+++  L++ +  L 
Sbjct: 121 FVGVPVKLGRNGVEQIYEI-NLDQADLDLL 149

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} Length = 146

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

 Score = 99.3 bits (247), Expect = 6e-26
 Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 5/143 (3%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 81
           KV ++G  G +G   A  M    +     + DVV        +   D  A          
Sbjct: 7   KVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSG 65

Query: 82  LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 141
             +     DLV+I AG P+KPG +R DL N N  I+ ++ + +     +    + +NPV+
Sbjct: 66  EYSDCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPVD 125

Query: 142 STVPIAAEVFKKAGTYDPKKLLG 164
               I      K   +  ++++G
Sbjct: 126 ----ILTYATWKFSGFPKERVIG 144

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} Length = 154

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

 Score = 98.2 bits (244), Expect = 2e-25
 Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 12/150 (8%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA-DISHMDTGAVVRGFLGQP 80
           KVA++G+ G IG  +  L  +  L  V+    V   P   A D+SH+ +       +   
Sbjct: 9   KVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE 67

Query: 81  -QLENALTGMDLVIIPAGVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCCPNATVN 134
              E ALTG D VI+ AG+ + PG      +R+DL   N+ I+R + + I K CP   + 
Sbjct: 68  YSYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFII 127

Query: 135 LISNPVNSTVPIAAEVFKKAGTYDPKKLLG 164
           +++NP++  V +  E            + G
Sbjct: 128 VVTNPLDCMVKVMCEASG----VPTNMICG 153

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 148

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 97.5 bits (242), Expect = 4e-25
 Identities = 34/147 (23%), Positives = 59/147 (40%), Gaps = 8/147 (5%)

Query: 20  GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA--DISHMDTGAVVRGFL 77
           G +V ++GA G +G      +    +   + L D   +  +    D +H    A     +
Sbjct: 6   GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDI 64

Query: 78  GQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137
                +      DLV+I AG  +KPG TR DL + N  I R++ E +          + +
Sbjct: 65  WHGDYD-DCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT 123

Query: 138 NPVNSTVPIAAEVFKKAGTYDPKKLLG 164
           NPV+    I      K      ++++G
Sbjct: 124 NPVD----ILTYATWKFSGLPHERVIG 146

>d1uxja2 d.162.1.1 (A:144-307) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} Length = 164

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

 Score = 97.5 bits (242), Expect = 6e-25
 Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 7/150 (4%)

Query: 167 MLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEY----L 222
           +LD  R  TF+A   G+  +DV   ++GGH    +             ++         +
Sbjct: 3   VLDAARYRTFIAMEAGVSVKDVQAMLMGGHGDEMVPLPRFSTISGIPVSEFIAPDRLAQI 62

Query: 223 TNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELP 282
             R + GG E+V      GSA  + A A  +  +A L+  +    V         + ++ 
Sbjct: 63  VERTRKGGGEIVNLLKT-GSAYYAPAAATAQMVEAVLKDKKRVMPVAAYLTGQYGLNDIY 121

Query: 283 FFASKVRLGRQGAEEIFQLGPLNEYESGLF 312
           F    V LG  G E+I +L PLNE E  L 
Sbjct: 122 FG-VPVILGAGGVEKILEL-PLNEEEMALL 149

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 159

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 96.2 bits (239), Expect = 1e-24
 Identities = 33/145 (22%), Positives = 60/145 (41%), Gaps = 8/145 (5%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQ 79
           K+ ++G  G +G   A+ + +  L   L L D       G   D+ H     +    +  
Sbjct: 21  KITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSL-FLSTPKIVF 78

Query: 80  PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 139
            +  N      LVII AG     G TR DL   N  I++ +  G+ +  P+  + +++NP
Sbjct: 79  GKDYNVSANSKLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVTNP 138

Query: 140 VNSTVPIAAEVFKKAGTYDPKKLLG 164
           V+    +      K   +   +++G
Sbjct: 139 VDILTYVVW----KISGFPVGRVIG 159

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} Length = 160

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

 Score = 94.3 bits (234), Expect = 6e-24
 Identities = 30/145 (20%), Positives = 58/145 (40%), Gaps = 8/145 (5%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 79
           K+ ++G  G +G   A+ +    L   L L DV+     G   D+ H          +  
Sbjct: 22  KITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVAD 80

Query: 80  PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 139
                      +V++ AGV ++ G +R +L   N  + + +   I K  P+  + ++SNP
Sbjct: 81  KDYS-VTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVSNP 139

Query: 140 VNSTVPIAAEVFKKAGTYDPKKLLG 164
           V+    +      K       +++G
Sbjct: 140 VDILTYVT----WKLSGLPKHRVIG 160

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 145

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

 Score = 91.8 bits (227), Expect = 4e-23
 Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 11/149 (7%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYD----VVNTPGVTADISHMDTGAVV--RG 75
           KV I+GA+G +G   A+L+   P +  L L      +    G+  DI     G       
Sbjct: 2   KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANI 61

Query: 76  FLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL 135
           ++   +    +   D+VII +GVPRK GM+R DL   NA IV    + IA+ C    + +
Sbjct: 62  YVESDENLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEICDTK-IFV 120

Query: 136 ISNPVNSTVPIAAEVFKKAGTYDPKKLLG 164
           I+NPV+     A         ++  ++ G
Sbjct: 121 ITNPVDVMTYKAL----VDSKFERNQVFG 145

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} Length = 146

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

 Score = 91.7 bits (227), Expect = 5e-23
 Identities = 27/148 (18%), Positives = 54/148 (36%), Gaps = 10/148 (6%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 81
           K+ I+G  G +G  +A  +    +       D          I   D  A +        
Sbjct: 3   KIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI 61

Query: 82  LEN-ALTGMDLVIIPAGVPR----KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 136
            +  AL   D+VI   G  +     P   R       + +V+++   + +   +  + +I
Sbjct: 62  NDWAALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVI 121

Query: 137 SNPVNSTVPIAAEVFKKAGTYDPKKLLG 164
           SNPV+    +   +F+    +   K++G
Sbjct: 122 SNPVD----VITALFQHVTGFPAHKVIG 145

>d5mdha2 d.162.1.1 (A:155-333) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} Length = 179

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 89.4 bits (221), Expect = 8e-22
 Identities = 27/159 (16%), Positives = 48/159 (30%), Gaps = 13/159 (8%)

Query: 166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNR 225
           T LD  RA   +A  LG+   DV   ++ G+   T  P ++  K      +         
Sbjct: 1   TRLDHNRAKAQIALKLGVTSDDVKNVIIWGNHSSTQYPDVNHAKVKLQAKEVGVYEAVKD 60

Query: 226 IQNGGTEVVEAKAGAG---------SATLSMAYAAVKFADACLRGLRGDAGVVECAFVAS 276
                 E +      G         S+ +S A A          G      V        
Sbjct: 61  DSWLKGEFITTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDG 120

Query: 277 Q---VTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLF 312
               V +   ++  V +  +  + +  L P+N++     
Sbjct: 121 NSYGVPDDLLYSFPVTIKDKTWKIVEGL-PINDFSREKM 158

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} Length = 162

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

 Score = 83.2 bits (205), Expect = 7e-20
 Identities = 23/167 (13%), Positives = 49/167 (29%), Gaps = 32/167 (19%)

Query: 22  KVAILGAAGGIGQPLAMLMKI----NPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGF 76
           ++A++G  G    P  +   +    +  +  +  YD+      +  D          +  
Sbjct: 2   RIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVL 60

Query: 77  LGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIA----------- 125
           +     E A+     VI         G   D+   +  G++     G+            
Sbjct: 61  ISD-TFEGAVVDAKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPI 119

Query: 126 --------KCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG 164
                   +   NAT+   +NP         E  +     + +K +G
Sbjct: 120 VEEYVDTVRKTSNATIVNFTNPSG----HITEFVRNY--LEYEKFIG 160

>d1ldma2 d.162.1.1 (A:161-329) Lactate dehydrogenase {Dogfish (Squalus acanthias) [TaxId: 7797]} Length = 169

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Dogfish (Squalus acanthias) [TaxId: 7797]

 Score = 83.0 bits (204), Expect = 1e-19
 Identities = 20/152 (13%), Positives = 40/152 (26%), Gaps = 6/152 (3%)

Query: 166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQ-----EETE 220
             LD  R    + E LG+        V+G H                         ++ +
Sbjct: 3   CNLDSARFRYLMGERLGVHSCSCHGWVIGEHGDSVPSVWSGMNVASIKLHPLDGTNKDKQ 62

Query: 221 YLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTE 280
                 ++      E     G  + ++  +    A+  ++ L     V         + +
Sbjct: 63  DWKKLHKDVVDSAYEVIKLKGYTSWAIGLSVADLAETIMKNLCRVHPVSTMVKDFYGIKD 122

Query: 281 LPFFASKVRLGRQGAEEIFQLGPLNEYESGLF 312
             F +    L   G   I ++  L   E    
Sbjct: 123 NVFLSLPCVLNDHGISNIVKM-KLKPNEEQQL 153

>d2ldxa2 d.162.1.1 (A:160-331) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 172

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 82.6 bits (203), Expect = 2e-19
 Identities = 25/155 (16%), Positives = 49/155 (31%), Gaps = 9/155 (5%)

Query: 166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQ--------E 217
             LD  R    + E LG++P      V+G H   ++           +           +
Sbjct: 3   CNLDSARFRYLIGEKLGVNPTSCHGWVLGEHGDSSVPIWSGVNVAGVTLKSLNPAIGTDK 62

Query: 218 ETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQ 277
             ++  N  +       E     G  + ++  +    A + L+ L+    V         
Sbjct: 63  NKQHWKNVHKQVVEGGYEVLDMKGYTSWAIGLSVTDLARSILKNLKRVHPVTTLVKGFHG 122

Query: 278 VTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLF 312
           + E  F +    LG  G  +  ++  +   E GL 
Sbjct: 123 IKEEVFLSIPCVLGESGITDFVKV-NMTAEEEGLL 156

>d1i0za2 d.162.1.1 (A:161-332) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} Length = 172

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

 Score = 81.4 bits (200), Expect = 5e-19
 Identities = 27/159 (16%), Positives = 49/159 (30%), Gaps = 17/159 (10%)

Query: 166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQ--------- 216
             LD  R    +AE LG+ P      ++G H G + + + S V       Q         
Sbjct: 3   CNLDSARFRYLMAEKLGIHPSSCHGWILGEH-GDSSVAVWSGVNVAGVSLQELNPEMGTD 61

Query: 217 ---EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAF 273
              E  + +   +     EV++ K     A   +  +     ++ L+ L     V     
Sbjct: 62  NDSENWKEVHKMVVESAYEVIKLKGYTNWA---IGLSVADLIESMLKNLSRIHPVSTMVK 118

Query: 274 VASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLF 312
               +    F +    L  +G   +     L + E    
Sbjct: 119 GMYGIENEVFLSLPCILNARGLTSVINQ-KLKDDEVAQL 156

>d1llda2 d.162.1.1 (A:150-319) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} Length = 170

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

 Score = 80.6 bits (198), Expect = 8e-19
 Identities = 24/159 (15%), Positives = 50/159 (31%), Gaps = 17/159 (10%)

Query: 166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCS------------ 213
           T LD  R    +A+  G++ ++V   + G H    +    S                   
Sbjct: 1   TNLDSARLRFLIAQQTGVNVKNVHAYIAGEHGDSEVPLWESATIGGVPMSDWTPLPGHDP 60

Query: 214 FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAF 273
              ++ E +   ++N   +++  K     A   +  + V   +A L        V     
Sbjct: 61  LDADKREEIHQEVKNAAYKIINGKGATNYA---IGMSGVDIIEAVLHDTNRILPVSSMLK 117

Query: 274 VASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLF 312
               ++++        L RQG        P+++ E    
Sbjct: 118 DFHGISDICMS-VPTLLNRQGVNNTINT-PVSDKELAAL 154

>d1o6za2 d.162.1.1 (A:163-330) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} Length = 161

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

 Score = 79.9 bits (196), Expect = 1e-18
 Identities = 27/147 (18%), Positives = 50/147 (34%), Gaps = 3/147 (2%)

Query: 166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNR 225
             LD  R    ++E      ++V+  ++G H G   +P+ S+V    +  +   +     
Sbjct: 3   GRLDSARFRYVLSEEFDAPVQNVEGTILGEH-GDAQVPVFSKVSVDGTDPEFSGDEKEQL 61

Query: 226 IQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFA 285
           + +     ++     G+     A       +A L                    +   F 
Sbjct: 62  LGDLQESAMDVIERKGATEWGPARGVAHMVEAILHDTGEVLPASVKLEGEFGHED-TAFG 120

Query: 286 SKVRLGRQGAEEIFQLGPLNEYESGLF 312
             V LG  G EEI +   L++YE  L 
Sbjct: 121 VPVSLGSNGVEEIVEW-DLDDYEQDLM 146

>d1hyea2 d.162.1.1 (A:146-313) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 168

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

 Score = 80.3 bits (197), Expect = 1e-18
 Identities = 27/151 (17%), Positives = 51/151 (33%), Gaps = 6/151 (3%)

Query: 166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNR 225
           T LD +R    +A+  G+   +V   ++G H G +++PLLS         Q+   +    
Sbjct: 3   THLDSLRFKVAIAKFFGVHIDEVRTRIIGEH-GDSMVPLLSATSIGGIPIQKFERFKELP 61

Query: 226 IQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQ----VTEL 281
           I     +V               +         +R +  +   +                
Sbjct: 62  IDEIIEDVKTKGEQIIRLKGGSEFGPAAAILNVVRCIVNNEKRLLTLSAYVDGEFDGIRD 121

Query: 282 PFFASKVRLGRQGAEEIFQLGPLNEYESGLF 312
                 V++GR G EE+  +  L++ E   F
Sbjct: 122 VCIGVPVKIGRDGIEEVVSI-ELDKDEIIAF 151

>d1llca2 d.162.1.1 (A:165-334) Lactate dehydrogenase {Lactobacillus casei [TaxId: 1582]} Length = 172

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

 Score = 79.9 bits (196), Expect = 2e-18
 Identities = 27/158 (17%), Positives = 59/158 (37%), Gaps = 17/158 (10%)

Query: 166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILP----------LLSQVKPPCSFT 215
           T LD  R    +AE++ +D R V   ++G H                 +   VK      
Sbjct: 1   TSLDTARFRQSIAEMVNVDARSVHAYIMGEHGDTEFPVWSHANIGGVTIAEWVKAHPEIK 60

Query: 216 QEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVA 275
           +++   +   +++   E+++ K   G+    +A A  + + A L        +    ++ 
Sbjct: 61  EDKLVKMFEDVRDAAYEIIKLK---GATFYGIATALARISKAILNDENAV--LPLSVYMD 115

Query: 276 SQVTEL-PFFASKVRLGRQGAEEIFQLGPLNEYESGLF 312
            Q      +  +   + R G + I ++ PL ++E    
Sbjct: 116 GQYGINDLYIGTPAVINRNGIQNILEI-PLTDHEEESM 152

>d1a5za2 d.162.1.1 (A:164-333) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 172

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 79.1 bits (194), Expect = 3e-18
 Identities = 33/157 (21%), Positives = 53/157 (33%), Gaps = 15/157 (9%)

Query: 166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPP----------CSFT 215
           T+LD  R  T +A+  G  PR V V V+G H    +      +                 
Sbjct: 2   TVLDTARLRTLIAQHCGFSPRSVHVYVIGEHGDSEVPVWSGAMIGGIPLQNMCQVCQKCD 61

Query: 216 QEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVA 275
            +  E    + +    E++E K     A        V+      + +   +  +E     
Sbjct: 62  SKILENFAEKTKRAAYEIIERKGATHYAIALAVADIVESIFFDEKRVLTLSVYLEDYLGV 121

Query: 276 SQVTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLF 312
             +      +  V LG+ G E I +L  LNE E   F
Sbjct: 122 KDL----CISVPVTLGKHGVERILEL-NLNEEELEAF 153

>d1t2da2 d.162.1.1 (A:151-315) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 165

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 78.7 bits (193), Expect = 3e-18
 Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 14/155 (9%)

Query: 167 MLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPL---------LSQVKPPCSFTQE 217
           +LD  R   ++++ L + PRDV+  +VG H    +L           L +       +  
Sbjct: 2   VLDTSRLKYYISQKLNVCPRDVNAHIVGAHGNKMVLLKRYITVGGIPLQEFINNKLISDA 61

Query: 218 ETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQ 277
           E E + +R  N   E+V   A    A  +      +     L+ +   + ++E  +  S 
Sbjct: 62  ELEAIFDRTVNTALEIVNLHASPYVAPAAAIIEMAESYLKDLKKVLICSTLLEGQYGHSD 121

Query: 278 VTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLF 312
           +    F  + V LG  G E++ +L  LN  E   F
Sbjct: 122 I----FGGTPVVLGANGVEQVIEL-QLNSEEKAKF 151

>d1ez4a2 d.162.1.1 (A:163-334) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} Length = 171

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

 Score = 78.7 bits (193), Expect = 4e-18
 Identities = 25/153 (16%), Positives = 45/153 (29%), Gaps = 8/153 (5%)

Query: 166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVK---PPCSFTQEETEYL 222
           T LD  R    + +   +DPR VD  ++G H G +     S       P     +E    
Sbjct: 1   TSLDSSRLRVALGKQFNVDPRSVDAYIMGEH-GDSEFAAYSTATIGTRPVRDVAKEQGVS 59

Query: 223 TNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVT--- 279
            + +      V        +   +  Y          + +  D   V             
Sbjct: 60  DDDLAKLEDGVRNKAYDIINLKGATFYGIGTALMRISKAILRDENAVLPVGAYMDGQYGL 119

Query: 280 ELPFFASKVRLGRQGAEEIFQLGPLNEYESGLF 312
              +  +   +G  G ++I +  PL+  E    
Sbjct: 120 NDIYIGTPAIIGGTGLKQIIES-PLSADELKKM 151

>d1hyha2 d.162.1.1 (A:167-329) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} Length = 163

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

 Score = 78.4 bits (192), Expect = 6e-18
 Identities = 27/147 (18%), Positives = 41/147 (27%), Gaps = 3/147 (2%)

Query: 166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNR 225
           T+LD  R    V E   LDPR V    +G H G +     S V+          +     
Sbjct: 2   TLLDTARMQRAVGEAFDLDPRSVSGYNLGEH-GNSQFVAWSTVRVMGQPIVTLADAGDID 60

Query: 226 IQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFA 285
           +     E  +      +     +Y     A    + +  DA                + +
Sbjct: 61  LAAIEEEARKGGFTVLNGKGYTSYGVATSAIRIAKAVMADAHAELVVSNRRDDMG-MYLS 119

Query: 286 SKVRLGRQGAEEIFQLGPLNEYESGLF 312
               +GR G      L  L   E    
Sbjct: 120 YPAIIGRDGVLAETTL-DLTTDEQEKL 145

>d1y6ja2 d.162.1.1 (A:149-317) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} Length = 169

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

 Score = 77.6 bits (190), Expect = 1e-17
 Identities = 22/158 (13%), Positives = 51/158 (32%), Gaps = 16/158 (10%)

Query: 166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQ--------- 216
           T+LD +R    ++E LG+D ++V   ++G H    +           +  +         
Sbjct: 1   TVLDSIRFRYLLSEKLGVDVKNVHGYIIGEHGDSQLPLWSCTHIAGKNINEYIDDPKCNF 60

Query: 217 --EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFV 274
             E+ + +   ++  G  +++ K              V+        +R    V+   + 
Sbjct: 61  TEEDKKKIAEDVKTAGATIIKNKGATYYGIAVSINTIVETLLKNQNTIRTVGTVINGMYG 120

Query: 275 ASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLF 312
                     +    +  +G +E+ Q   L   E    
Sbjct: 121 IED----VAISLPSIVNSEGVQEVLQF-NLTPEEEEAL 153

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} Length = 169

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 77.0 bits (189), Expect = 2e-17
 Identities = 28/172 (16%), Positives = 48/172 (27%), Gaps = 36/172 (20%)

Query: 22  KVAILGAAGGIGQPLAMLMKINPL----VSVLHLYDVVNTP--GVTADISH---MDTGAV 72
           K+A +G  G    P  +   I       V  L L D+                 ++   V
Sbjct: 3   KIATIGG-GSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGV 61

Query: 73  VRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGI-------- 124
                       AL G D V     V       +D+   +  G++     G         
Sbjct: 62  PIEIHLTLDRRRALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLR 121

Query: 125 ------------AKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG 164
                        + CP+A +   +NP      +  E   +      +K++G
Sbjct: 122 TIPVILDIIRDMEELCPDAWLINFTNPAG----MVTEAVLRY--TKQEKVVG 167

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} Length = 167

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

 Score = 76.6 bits (188), Expect = 2e-17
 Identities = 28/162 (17%), Positives = 46/162 (28%), Gaps = 30/162 (18%)

Query: 21  FKVAILGAAGGIGQP---LAMLMKINPL-VSVLHLYDV----VNTPGVTADISHMDTGAV 72
           F + I G  G    P   L +L  +    +  L LYD      +      D+   +    
Sbjct: 4   FSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPD 62

Query: 73  VRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIA------- 125
           +         E A T +D V+    V +      D+   +  G+V     G         
Sbjct: 63  IEFA-ATTDPEEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMR 121

Query: 126 -------------KCCPNATVNLISNPVNSTVPIAAEVFKKA 154
                        K  P+A +   SNP          +   +
Sbjct: 122 SIGGVLEILDYMEKYSPDAWMLNYSNPAAIVAEATRRLRPNS 163

>d7mdha2 d.162.1.1 (A:198-385) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} Length = 188

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

 Score = 77.0 bits (189), Expect = 3e-17
 Identities = 25/157 (15%), Positives = 46/157 (29%), Gaps = 12/157 (7%)

Query: 166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEET------ 219
           T LD  RA   +A   G+    V    + G+   T +P     K      +E        
Sbjct: 1   TRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKIDGRPVKEVIKRTKWL 60

Query: 220 -EYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQ- 277
            E  T  +Q  G  +++      S+  S A +      + +             +     
Sbjct: 61  EEEFTITVQKRGGALIQKW--GRSSAASTAVSIADAIKSLVTPTPEGDWFSTGVYTTGNP 118

Query: 278 --VTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLF 312
             + E   F+   R    G  E+      +++     
Sbjct: 119 YGIAEDIVFSMPCRSKGDGDYELATDVSNDDFLWERI 155

>d1ldna2 d.162.1.1 (A:163-330) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 168

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 76.1 bits (186), Expect = 4e-17
 Identities = 20/157 (12%), Positives = 50/157 (31%), Gaps = 15/157 (9%)

Query: 166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQ--------- 216
           T+LD  R    + E   + P++V   ++G H    +              +         
Sbjct: 1   TILDTARFRFLLGEYFSVAPQNVHAYIIGEHGDTELPVWSQAYIGVMPIRKLVESKGEEA 60

Query: 217 -EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVA 275
            ++ E +   +++   +++E K               +        +   +  ++  +  
Sbjct: 61  QKDLERIFVNVRDAAYQIIEKKGATYYGIAMGLARVTRAILHNENAILTVSAYLDGLYGE 120

Query: 276 SQVTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLF 312
             V    +      + R G  E+ ++  LN+ E   F
Sbjct: 121 RDV----YIGVPAVINRNGIREVIEI-ELNDDEKNRF 152

>d1y7ta2 d.162.1.1 (A:154-332) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 173

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 73.6 bits (180), Expect = 3e-16
 Identities = 28/153 (18%), Positives = 47/153 (30%), Gaps = 7/153 (4%)

Query: 166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVK----PPCSFTQEETEY 221
           T LD  RA   +A+  G     +    V G+   T+ P L   +    P       E   
Sbjct: 2   TRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSSTMFPDLFHAEVDGRPALELVDMEWYE 61

Query: 222 LTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQ--VT 279
                          +A   S+  S A AA++       G      V        +  + 
Sbjct: 62  KVFIPTVAQRGAAIIQARGASSAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIP 121

Query: 280 ELPFFASKVRLGRQGAEEIFQLGPLNEYESGLF 312
           E   ++  V   + GA  + +   +NE+     
Sbjct: 122 EGIVYSFPV-TAKDGAYRVVEGLEINEFARKRM 153

>d1pzga2 d.162.1.1 (A:164-334) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} Length = 174

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

 Score = 71.4 bits (174), Expect = 2e-15
 Identities = 37/155 (23%), Positives = 58/155 (37%), Gaps = 12/155 (7%)

Query: 167 MLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFT---------QE 217
           MLD  R   +VA+ L + PRDV   V+G H    +  +                    ++
Sbjct: 3   MLDSGRFRRYVADALSVSPRDVQATVIGTHGDCMVPLVRYITVNGYPIQKFIKDGVVTEK 62

Query: 218 ETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQ 277
           + E +    +  G E+V    G GSA  + A +AV  A + L   +              
Sbjct: 63  QLEEIAEHTKVSGGEIVRFL-GQGSAYYAPAASAVAMATSFLNDEKRVIPCSVYCNGEYG 121

Query: 278 VTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLF 312
           + +  F      +G  G E + +L  LNE E   F
Sbjct: 122 LKD-MFIGLPAVIGGAGIERVIEL-ELNEEEKKQF 154

>d1b8pa2 d.162.1.1 (A:159-329) Malate dehydrogenase {Aquaspirillum arcticum [TaxId: 87645]} Length = 171

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Aquaspirillum arcticum [TaxId: 87645]

 Score = 70.6 bits (172), Expect = 3e-15
 Identities = 21/151 (13%), Positives = 40/151 (26%), Gaps = 7/151 (4%)

Query: 168 LDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCS-----FTQEETEYL 222
           LD  RA + +A   G     ++   V G+   T+       +   +        +     
Sbjct: 3   LDHNRALSQIAAKTGKPVSSIEKLFVWGNHSPTMYADYRYAQIDGASVKDMINDDAWNRD 62

Query: 223 TNRIQNGGTEVVEAKAGAGSATLSM-AYAAVKFADACLRGLRGDAGVVECAFVASQVTEL 281
           T     G        A   S+  S    A     D  L        +   +  +  + E 
Sbjct: 63  TFLPTVGKRGAAIIDARGVSSAASAANAAIDHIHDWVLGTAGKWTTMGIPSDGSYGIPEG 122

Query: 282 PFFASKVRLGRQGAEEIFQLGPLNEYESGLF 312
             F   V       + +  L  ++ +     
Sbjct: 123 VIFGFPVTTENGEYKIVQGL-SIDAFSQERI 152

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

 Score = 70.2 bits (171), Expect = 4e-15
 Identities = 25/166 (15%), Positives = 41/166 (24%), Gaps = 34/166 (20%)

Query: 20  GFKVAILGAAGGIGQPLAM---LMKINPL-VSVLHLYDVV--NTPGVTADISHM-DTGAV 72
             K+ I+GA G     L +   L K   L  S + L D+       +        +    
Sbjct: 2   SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGA 60

Query: 73  VRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNI-------------------- 112
              F     L++ +   D VI  A V     + +                          
Sbjct: 61  DLKFEKTMNLDDVIIDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYY 120

Query: 113 ------NAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFK 152
                        +   I K  P A     +NP+     +      
Sbjct: 121 TFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPIFEGTTLVTRTVP 166

>d1ojua2 d.162.1.1 (A:164-331) Lactate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 152

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 54.2 bits (130), Expect = 1e-09
 Identities = 24/147 (16%), Positives = 45/147 (30%), Gaps = 12/147 (8%)

Query: 166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNR 225
             LD  R    +      + R     ++G H G ++    S          E  E   N 
Sbjct: 2   NQLDSQRLKERLYNAGARNIRRA--WIIGEH-GDSMFVAKSLADFDGEVDWEAVE---ND 55

Query: 226 IQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFA 285
           ++    EV++     G+     A A  +   A +                  +  +    
Sbjct: 56  VRFVAAEVIK---RKGATIFGPAVAIYRMVKAVVEDTGEIIPTSMILQGEYGIENV-AVG 111

Query: 286 SKVRLGRQGAEEIFQLGPLNEYESGLF 312
              +LG+ GA E+  +  L++ E    
Sbjct: 112 VPAKLGKNGA-EVADI-KLSDEEIEKL 136

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	369
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	100.0
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	100.0
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	100.0
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	100.0
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	100.0
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	100.0
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	100.0
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	100.0
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	100.0
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	100.0
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	100.0
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	99.98
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	99.98
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	99.97
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	99.97
d1mlda2	169	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	99.97
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	99.97
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	99.97
d2cmda2	167	Malate dehydrogenase {Escherichia coli [TaxId: 562	99.97
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	99.97
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	99.96
d1uxja2	164	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	99.96
d7mdha2	188	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	99.96
d1guza2	163	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	99.96
d1ojua2	152	Lactate dehydrogenase {Archaeon Archaeoglobus fulg	99.96
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	99.96
d1llda2	170	Lactate dehydrogenase {Bifidobacterium longum, str	99.96
d1pzga2	174	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	99.96
d1ez4a2	171	Lactate dehydrogenase {Lactobacillus pentosus [Tax	99.96
d1y6ja2	169	Lactate dehydrogenase {Clostridium thermocellum [T	99.96
d1a5za2	172	Lactate dehydrogenase {Thermotoga maritima [TaxId:	99.95
d5mdha2	179	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	99.95
d1i0za2	172	Lactate dehydrogenase {Human (Homo sapiens), heart	99.95
d1t2da2	165	Lactate dehydrogenase {Malaria parasite (Plasmodiu	99.95
d1o6za2	161	Malate dehydrogenase {Archaeon Haloarcula marismor	99.95
d1ldma2	169	Lactate dehydrogenase {Dogfish (Squalus acanthias)	99.95
d1hyea2	168	MJ0490, lactate/malate dehydrogenase {Archaeon Met	99.95
d1hyha2	163	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	99.95
d1ldna2	168	Lactate dehydrogenase {Bacillus stearothermophilus	99.95
d2ldxa2	172	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	99.94
d1llca2	172	Lactate dehydrogenase {Lactobacillus casei [TaxId:	99.94
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	99.94
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	99.93
d1y7ta2	173	Malate dehydrogenase {Thermus thermophilus [TaxId:	99.93
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	99.92
d1b8pa2	171	Malate dehydrogenase {Aquaspirillum arcticum [TaxI	99.91
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	99.9
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	99.55
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	98.96
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	98.81
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	98.7
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	98.49
d1up7a2	253	6-phospho-beta-glucosidase {Thermotoga maritima [T	98.46
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	98.41
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	98.39
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.34
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	98.31
d1u8xx2	276	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	98.26
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	98.2
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	98.19
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	98.17
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	98.07
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	98.04
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	98.03
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	97.96
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.94
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	97.91
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	97.89
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	97.85
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	97.8
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	97.8
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	97.78
d1s6ya2	270	6-phospho-beta-glucosidase {Bacillus stearothermop	97.77
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	97.74
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.67
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	97.65
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	97.64
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	97.62
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	97.6
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	97.58
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	97.55
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	97.55
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	97.52
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	97.49
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	97.47
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	97.46
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.38
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	97.33
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	97.32
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	97.3
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	97.25
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	97.24
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	97.21
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	97.19
d1obba2	308	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	97.19
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	97.17
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	97.16
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.08
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	97.07
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	96.99
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	96.99
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	96.99
d1vjta2	278	Putative alpha-glucosidase TM0752 {Thermotoga mari	96.97
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	96.97
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	96.92
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	96.86
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.84
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.83
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	96.82
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	96.81
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	96.78
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.76
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	96.71
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	96.7
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	96.69
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	96.68
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	96.67
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	96.66
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	96.58
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	96.58
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	96.58
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	96.51
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	96.51
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	96.51
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	96.5
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	96.49
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.44
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	96.41
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	96.4
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	96.34
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	96.3
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	96.3
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	96.23
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	96.23
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	96.23
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	96.21
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	96.2
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	96.19
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	96.19
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	96.17
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	96.16
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	96.15
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	96.14
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	96.13
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	96.12
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	96.11
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	96.09
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	96.07
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	96.07
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	96.06
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.05
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	95.99
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	95.99
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	95.98
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	95.97
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	95.97
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	95.96
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	95.9
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	95.9
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.87
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.83
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	95.82
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.79
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.77
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	95.71
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	95.71
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	95.69
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.67
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	95.65
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	95.64
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	95.63
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	95.62
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	95.62
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	95.6
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	95.58
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	95.57
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	95.49
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	95.42
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	95.4
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	95.35
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	95.34
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	95.34
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	95.28
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	95.27
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	95.25
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	95.17
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	95.15
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.15
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	95.1
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	95.09
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	95.05
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	95.03
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	94.99
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.96
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	94.95
d1w5fa1	194	Cell-division protein FtsZ {Thermotoga maritima [T	94.87
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	94.86
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	94.76
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	94.7
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	94.68
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	94.65
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	94.63
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	94.57
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	94.46
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	94.39
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	94.37
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.28
d2vapa1	209	Cell-division protein FtsZ {Archaeon Methanococcus	94.25
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	94.21
d1pj3a1	294	Mitochondrial NAD(P)-dependent malic enzyme {Human	94.2
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	94.16
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	94.07
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	94.03
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.01
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	93.99
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	93.95
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	93.82
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	93.61
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	93.56
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	93.5
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	93.49
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	93.48
d1vl6a1	222	Malate oxidoreductase (malic enzyme) {Thermotoga m	93.46
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	93.43
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	93.43
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	93.42
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	93.39
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	93.33
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	93.32
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	93.29
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.07
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	93.02
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	92.91
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	92.87
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	92.74
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	92.73
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	92.66
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	92.64
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	92.52
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	92.5
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	92.43
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	92.41
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	92.39
d1rq2a1	198	Cell-division protein FtsZ {Mycobacterium tubercul	92.33
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	92.32
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	92.3
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	92.08
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	92.04
d1ofua1	198	Cell-division protein FtsZ {Pseudomonas aeruginosa	91.93
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	91.92
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	91.9
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	91.83
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	91.8
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	91.79
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	91.79
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	91.77
d1gq2a1	298	Mitochondrial NAD(P)-dependent malic enzyme {Domes	91.77
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	91.74
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	91.7
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	91.57
d1o0sa1	308	Mitochondrial NAD(P)-dependent malic enzyme {Pig r	91.53
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	91.35
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	91.3
d2h1qa1	251	Hypothetical protein Dhaf_3308 {Desulfitobacterium	91.13
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	91.1
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	91.07
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	91.07
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	90.97
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	90.96
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	90.71
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	90.69
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	90.69
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	90.66
d1vlva2	161	Ornithine transcarbamoylase {Thermotoga maritima [	90.62
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	90.47
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	90.45
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	90.44
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	90.38
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	90.08
d1pvva2	163	Ornithine transcarbamoylase {Archaeon Pyrococcus f	89.68
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	89.64
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	89.42
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	89.4
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.09
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	89.03
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	88.61
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	88.55
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	87.84
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	87.77
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.66
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	87.63
d1dxha2	185	Ornithine transcarbamoylase {Pseudomonas aeruginos	87.56
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	87.48
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	87.32
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	87.14
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	86.69
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	86.64
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	86.6
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	86.44
d1pg5a2	153	Aspartate carbamoyltransferase catalytic subunit {	86.31
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	86.14
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	86.05
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	85.92
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	85.56
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	85.18
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	85.01
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	84.84
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	84.53
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	84.2
d2at2a2	151	Aspartate carbamoyltransferase catalytic subunit {	84.09
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	83.95
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	83.86
d1duvg2	183	Ornithine transcarbamoylase {Escherichia coli [Tax	83.71
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	83.68
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	83.42
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	83.39
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	82.15
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	81.89
d1j8yf2	211	GTPase domain of the signal sequence recognition p	81.79
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	81.77
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	81.65
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	81.25
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	81.17
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	81.13
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	80.67
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	80.06

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=9e-36  Score=255.03  Aligned_cols=143  Identities=64%  Similarity=1.084  Sum_probs=134.9

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCCCC
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRK  101 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p~k  101 (369)
                      ||+||||+|.||+++++.|+++++++||+|+|+++.+++++|++|.........+..+++++++++|||+||+++|.||+
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~aDivVitag~~~~   81 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPRK   81 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCCCC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEcCCChHHHhCCCCEEEECCCcCCC
Confidence            99999987999999999999999999999999998999999999988666666555567778999999999999999999


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEE
Q 017551          102 PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  164 (369)
Q Consensus       102 ~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG  164 (369)
                      |||+|.+++..|+++++++++++.++||+++++++|||+|++++++++++++.++||++||||
T Consensus        82 ~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvtNPvD~~t~~~~~~~kk~~~~p~~rViG  144 (144)
T d1mlda1          82 PGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPVNSTIPITAEVFKKHGVYNPNKIFG  144 (144)
T ss_dssp             TTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSCHHHHHHHHHHHHHHTTCCCTTSEEE
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEecCchhhhHHHHHHHHHHhcCCCcccccC
Confidence            999999999999999999999999999999999999999999999999999999999999998

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.9e-35  Score=251.26  Aligned_cols=143  Identities=59%  Similarity=0.968  Sum_probs=132.5

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhC-CCCcEEEEEeCCC-chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~-~~~~el~L~D~~~-~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      |||+||||+|+||+++++.|+.+ +.++||+|+|+++ ++|+++||+|..+......+.+++++ ++++|||+||+++|.
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~~~~~~~-~~~~~aDvvvitaG~   79 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDAT-PALEGADVVLISAGV   79 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEECSSCCH-HHHTTCSEEEECCSC
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEEEcCCCc-cccCCCCEEEECCCc
Confidence            79999997799999999998754 7889999999987 78999999998876666766656665 789999999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEE
Q 017551           99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  164 (369)
Q Consensus        99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG  164 (369)
                      ||+|||+|.+++..|.+++++++++|.++||+++++++|||+|++++++++++++.++||++|+||
T Consensus        80 ~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvtNPvD~m~~~~~~v~~~~~~l~~~RviG  145 (145)
T d2cmda1          80 RRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFG  145 (145)
T ss_dssp             CCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSSHHHHHHHHHHHHHHTTCCCGGGEEE
T ss_pred             cCCCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEccCCchHHHHHHHHHHHHcCCCChhhccC
Confidence            999999999999999999999999999999999999999999999999999999999999999998

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=100.00  E-value=1.8e-34  Score=246.47  Aligned_cols=139  Identities=26%  Similarity=0.390  Sum_probs=124.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC-CCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~-~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      |.||+|||| |+||+++++.++++++++||+|+|+++  ++|+++||+|... ........ ++++ ++++|||+||+++
T Consensus         1 p~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~-~~~~-~~~~daDvVVita   77 (143)
T d1llda1           1 PTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDG-SDDP-EICRDADMVVITA   77 (143)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEE-ESCG-GGGTTCSEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeec-CCCH-HHhhCCcEEEEec
Confidence            469999998 999999999999999999999999998  7899999999763 22223222 4565 6899999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe
Q 017551           97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  165 (369)
Q Consensus        97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~  165 (369)
                      |.||+|||+|++++..|+++++++++.|.+++|+++++++|||+|+||+++    ++.+|||++||||+
T Consensus        78 G~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~ivvtNPvDvmt~~~----~~~sg~p~~rViG~  142 (143)
T d1llda1          78 GPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVDIATHVA----QKLTGLPENQIFGS  142 (143)
T ss_dssp             CCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHH----HHHHTCCTTSEEEC
T ss_pred             ccccCCCCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEEeCCchHHHHHHH----HHHHCCChhhccCC
Confidence            999999999999999999999999999999999999999999999998765    88999999999997

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=100.00  E-value=5.5e-34  Score=243.34  Aligned_cols=138  Identities=27%  Similarity=0.474  Sum_probs=124.3

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC--CCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~--~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      |||+|||| |+||+++++.++.+++++||+|+|+++  ++|+++||+|...  ....+... ++|+ ++++|||+||+++
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~-~~d~-~~~~~adiVvita   77 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVG-GADY-SLLKGSEIIVVTA   77 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEE-ESCG-GGGTTCSEEEECC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCcccc-CCCH-HHhccccEEEEec
Confidence            79999998 999999999999999999999999998  7899999999752  22223222 4565 7999999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe
Q 017551           97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  165 (369)
Q Consensus        97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~  165 (369)
                      |.||+||++|.+++.+|+++++++++++.++||+++++++|||+|++|+++    ++.++||++||||+
T Consensus        78 g~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~p~aivivvtNPvD~~t~~~----~k~sg~p~~rViG~  142 (142)
T d1ojua1          78 GLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPMDVMTYIM----WKESGKPRNEVFGM  142 (142)
T ss_dssp             CCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSHHHHHHHH----HHHSCCCTTSEEEC
T ss_pred             cccCCCCCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEEecCChHHHHHHH----HHHHCCChhcEecC
Confidence            999999999999999999999999999999999999999999999999764    88999999999996

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=100.00  E-value=5.1e-34  Score=245.26  Aligned_cols=140  Identities=24%  Similarity=0.342  Sum_probs=126.1

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC--CCeEEEEeCCCChhhhcCCCcEEE
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVI   93 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~--~~~v~~~~~t~dl~~al~~ADiVi   93 (369)
                      ....||+|||| |+||+++++.|+++++++||+|+|+++  ++|+++||+|...  ...++..  ++|+ ++++|||+||
T Consensus         4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~--~~d~-~~l~daDvvv   79 (148)
T d1ldna1           4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIW--HGDY-DDCRDADLVV   79 (148)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEE--ECCG-GGTTTCSEEE
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEE--ECCH-HHhccceeEE
Confidence            34569999998 999999999999999999999999988  7899999999863  2344443  3454 7899999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe
Q 017551           94 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  165 (369)
Q Consensus        94 i~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~  165 (369)
                      +++|.|+++|++|++++.+|+++++++++.|.++||+++++++|||+|++|+++    ++.+|||++||||+
T Consensus        80 itag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvtNPvd~~t~~~----~k~sg~p~~rViG~  147 (148)
T d1ldna1          80 ICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPVDILTYAT----WKFSGLPHERVIGS  147 (148)
T ss_dssp             ECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSSSHHHHHHHH----HHHHTCCGGGEEEC
T ss_pred             EecccccccCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEecCccHHHHHHH----HHHHCcChhheecC
Confidence            999999999999999999999999999999999999999999999999999765    78889999999996

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=100.00  E-value=2.3e-33  Score=239.22  Aligned_cols=136  Identities=28%  Similarity=0.389  Sum_probs=121.4

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC----chhHHHHhhcccC-CCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN----TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~----~~g~~~dL~~~~~-~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      ||+||||+|+||+++++.++++++++||+|+|++.    ++|+++||+|... ....+..+  .++ ++++|||+||++|
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~--~~~-~~~~~aDiVvita   78 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ--GGY-EDTAGSDVVVITA   78 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE--CCG-GGGTTCSEEEECC
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEee--CCH-HHhhhcCEEEEec
Confidence            99999977999999999999999999999999864    5689999999542 23334333  354 7899999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEE
Q 017551           97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  164 (369)
Q Consensus        97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG  164 (369)
                      |.||+|||+|++++..|++++++++++|.++||+++++++|||+|+|++++    ++.+|||++||||
T Consensus        79 G~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~ivvtNPvDvmt~~~----~k~sg~~~~rViG  142 (142)
T d1o6za1          79 GIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPVDLLNRHL----YEAGDRSREQVIG  142 (142)
T ss_dssp             CCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSHHHHHHHH----HHHSSSCGGGEEE
T ss_pred             ccccccCCchhhHHHHHHHHHHHHHHHHHhcCCCceEEEecChHHHHHHHH----HHHHCcCcccccC
Confidence            999999999999999999999999999999999999999999999998754    8899999999998

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=2.1e-33  Score=239.23  Aligned_cols=137  Identities=29%  Similarity=0.497  Sum_probs=123.6

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC-CCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~-~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      |||+|||| |+||+++++.++++++++||+|+|+++  ++++++|+.|... .......+  +| +++++|||+||+++|
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~--~~-~~~~~~adivvitag   76 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA--GD-YADLKGSDVVIVAAG   76 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE--CC-GGGGTTCSEEEECCC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccC--Cc-HHHhcCCCEEEEecc
Confidence            79999998 999999999999999999999999998  7899999999752 23444433  45 478999999999999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe
Q 017551           98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  165 (369)
Q Consensus        98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~  165 (369)
                      .||++|++|.+++.+|++++++++++|.++||++|++++|||+|++|+++    ++.+|||++||||+
T Consensus        77 ~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~~p~aivivvtNPvd~~t~~~----~k~sg~p~~rViGt  140 (140)
T d1a5za1          77 VPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVDVLTYFF----LKESGMDPRKVFGS  140 (140)
T ss_dssp             CCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHH----HHHHTCCTTTEEEC
T ss_pred             cccCCCcchhhhhccccchHHHHHHHHHhcCCCcEEEEeCCcHHHHHHHH----HHHHCcCccceeCc
Confidence            99999999999999999999999999999999999999999999998765    78889999999995

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=100.00  E-value=3.2e-33  Score=238.56  Aligned_cols=138  Identities=31%  Similarity=0.478  Sum_probs=123.4

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC--CCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~--~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      |||+|||| |+||+++++.|+.+++++||+|||+++  +.+.++|+.|...  ....+... ++| +++++|||+||+++
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~-~~~-~~~~~dadvvvita   77 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTG-SND-YADTANSDIVIITA   77 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEE-ESC-GGGGTTCSEEEECC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEe-cCC-HHHhcCCeEEEEEE
Confidence            79999998 999999999999999999999999998  6788899998752  23333322 355 47899999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe
Q 017551           97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  165 (369)
Q Consensus        97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~  165 (369)
                      |.|++||++|.+++.+|+++++++++++.++||++|++++|||+|++++++    ++.++||++||||+
T Consensus        78 g~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~~p~aivivvtNPvd~~~~~~----~~~sg~p~~rviG~  142 (142)
T d1guza1          78 GLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPLDIMTHVA----WVRSGLPKERVIGM  142 (142)
T ss_dssp             SCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCSSHHHHHHHH----HHHHCSCGGGEEEE
T ss_pred             ecCCCCCCchHHHHHHHHHHHHHHHHHhhccCCCeEEEEecCChHHHHHHH----HHHhCCChHhEeeC
Confidence            999999999999999999999999999999999999999999999999765    77889999999996

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=100.00  E-value=4.2e-33  Score=237.82  Aligned_cols=137  Identities=29%  Similarity=0.391  Sum_probs=116.9

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC-CCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~-~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      .||+|||| |+||+++++.++++++++||+|||+++  ++|+++||.|... ......+  +.+ +++++|||+||+++|
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~--~~~-~~~~~~adivvitag   77 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY--AGD-YSDVKDCDVIVVTAG   77 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC----C-GGGGTTCSEEEECCC
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEe--eCc-HHHhCCCceEEEecc
Confidence            49999999 999999999999999999999999988  6899999999763 3444443  345 478999999999999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe
Q 017551           98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  165 (369)
Q Consensus        98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~  165 (369)
                      .|+++|++|.+++.+|++++++++++|.++||+++++++|||+|++|+++    ++.+|||++||||+
T Consensus        78 ~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~ivvtNPvdv~t~~~----~k~sg~p~~rViG~  141 (142)
T d1y6ja1          78 ANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPVDIITYMI----QKWSGLPVGKVIGS  141 (142)
T ss_dssp             C------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSHHHHHHHH----HHHHTCCTTTEEEC
T ss_pred             cccCcCcchhHHhhHHHHHHHHHHHHhhccCCCceEEEecChHHHHHHHH----HHHHCCCccceecC
Confidence            99999999999999999999999999999999999999999999998754    88899999999996

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=100.00  E-value=5.2e-33  Score=241.41  Aligned_cols=140  Identities=21%  Similarity=0.349  Sum_probs=125.1

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC--CCeEEEEeCCCChhhhcCCCcEE
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLV   92 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~--~~~v~~~~~t~dl~~al~~ADiV   92 (369)
                      ..+..||+|||+ |.||+++++.|+++++++||+|||+++  ++|+++||+|...  +.....  ...|+ ++++|||+|
T Consensus        17 ~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~--~~~d~-~~~~~adiV   92 (160)
T d1i0za1          17 TVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIV--ADKDY-SVTANSKIV   92 (160)
T ss_dssp             CCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEE--ECSSG-GGGTTCSEE
T ss_pred             cCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEE--eccch-hhcccccEE
Confidence            344579999998 999999999999999999999999987  7899999999763  222222  24564 789999999


Q ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEE
Q 017551           93 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  164 (369)
Q Consensus        93 ii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG  164 (369)
                      |++||.||+|||+|++++.+|++++++++++|.+++|+++++++|||+|++|+++    ++.+|||++||||
T Consensus        93 VitAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvtNPvDv~t~~~----~k~sglp~~rViG  160 (160)
T d1i0za1          93 VVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVSNPVDILTYVT----WKLSGLPKHRVIG  160 (160)
T ss_dssp             EECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHH----HHHHCCCGGGEEE
T ss_pred             EEecCCccccCcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchHHHHHHH----HHHHCcCcccccC
Confidence            9999999999999999999999999999999999999999999999999999765    7888999999998

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=100.00  E-value=7.6e-33  Score=236.93  Aligned_cols=138  Identities=30%  Similarity=0.465  Sum_probs=120.9

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC----chhHHHHhhcccC--CCeEEEE-eCCCChhhhcCCCcEEE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN----TPGVTADISHMDT--GAVVRGF-LGQPQLENALTGMDLVI   93 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~----~~g~~~dL~~~~~--~~~v~~~-~~t~dl~~al~~ADiVi   93 (369)
                      |||+||||+|.||+++++.|+++++++||+|+|+++    ++|+++||.|...  ...++.+ .+++| +++++|||+||
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d-~~~l~~aDvVV   79 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDEN-LRIIDESDVVI   79 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTC-GGGGTTCSEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcch-HHHhccceEEE
Confidence            799999987999999999999999999999999986    4688999999652  3333332 22445 47999999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEE
Q 017551           94 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  164 (369)
Q Consensus        94 i~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG  164 (369)
                      ++||.||+|||+|.+++..|+++++++++.+.++||+++ +++|||+|+|++++    ++.++||++||||
T Consensus        80 itAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~~~~~i-ivVtNPvD~mt~~~----~k~sg~p~~rViG  145 (145)
T d1hyea1          80 ITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEICDTKI-FVITNPVDVMTYKA----LVDSKFERNQVFG  145 (145)
T ss_dssp             ECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCCCEE-EECSSSHHHHHHHH----HHHHCCCTTSEEE
T ss_pred             EecccccCCCCChhhhhhhhHHHHHHHHHHHhccCCCeE-EEEcCchHHHHHHH----HHHHCcCcccccC
Confidence            999999999999999999999999999999999999985 56899999999765    7888999999998

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=99.98  E-value=2.1e-33  Score=240.70  Aligned_cols=137  Identities=18%  Similarity=0.249  Sum_probs=117.3

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC--CCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~--~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      +||+|||| |+||+++++.|+++++++||+|||+++  ++|+++||+|...  .......  ++|+ ++++|||+||+++
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~--~~d~-~~l~~adiVVita   77 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIV--INDW-AALADADVVISTL   77 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEE--ESCG-GGGTTCSEEEECC
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCcccee--ccCH-HHhccccEEEEec
Confidence            59999998 999999999999999999999999998  6899999999763  2333443  3454 7899999999999


Q ss_pred             CCCC----CCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe
Q 017551           97 GVPR----KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  165 (369)
Q Consensus        97 g~p~----k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~  165 (369)
                      |.||    +||++|.+++.+|+++++++++.+.++||++|++++|||+|++|+++    ++.+|||++||||+
T Consensus        78 G~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aivivvtNPvD~~t~~~----~k~sg~p~~rViGt  146 (146)
T d1hyha1          78 GNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVISNPVDVITALF----QHVTGFPAHKVIGT  146 (146)
T ss_dssp             SCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHHH----HHHHCCCGGGEEEC
T ss_pred             cccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecCcHHHHHHHH----HHHhCCCccceeCc
Confidence            9988    78999999999999999999999999999999999999999998765    88899999999995

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=99.98  E-value=6.6e-33  Score=237.66  Aligned_cols=139  Identities=25%  Similarity=0.395  Sum_probs=115.1

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC-CCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIP   95 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~-~~~v~~~~~t~dl~~al~~ADiVii~   95 (369)
                      +.+||+|||+ |+||+++++.|+++++++||+|||+++  ++|+++||+|... ......++  +|+ ++++|||+||++
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~--~d~-~~~~~adivvit   79 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS--GEY-SDCKDADLVVIT   79 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE--CCG-GGGTTCSEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEee--ccH-HHhccccEEEEe
Confidence            4679999998 999999999999999999999999998  7899999999763 22333333  465 679999999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe
Q 017551           96 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  165 (369)
Q Consensus        96 ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~  165 (369)
                      +|.|++||++|++++.+|++++++++++|.++||+++++++|||+|++++++    ++.++||++||||+
T Consensus        80 ag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvtNPvdv~t~~~----~k~sg~p~~rViG~  145 (146)
T d1ez4a1          80 AGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPVDILTYAT----WKFSGFPKERVIGS  145 (146)
T ss_dssp             CCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHHH----HHHHCCCGGGEEEC
T ss_pred             cccccCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCccHHHHHHH----HHHHCcCccceecC
Confidence            9999999999999999999999999999999999999999999999998664    78899999999996

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=1.8e-32  Score=237.85  Aligned_cols=140  Identities=24%  Similarity=0.386  Sum_probs=124.2

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCC-CeEEEEeCCCChhhhcCCCcEEEE
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG-AVVRGFLGQPQLENALTGMDLVII   94 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~-~~v~~~~~t~dl~~al~~ADiVii   94 (369)
                      .+..||+|||| |.||+++++.|+.+++++||+|+|+++  ++|+++||+|.... ..-.... ++|+ ++++|||+||+
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~-~~d~-~~~~~adivvi   93 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVF-GKDY-NVSANSKLVII   93 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEE-ESSG-GGGTTEEEEEE
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEe-ccch-hhhccccEEEE
Confidence            34469999998 999999999999999999999999987  78999999998742 1112222 3564 78999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEE
Q 017551           95 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  164 (369)
Q Consensus        95 ~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG  164 (369)
                      ++|.||++||+|++++..|+++++++++.|.+++|+++++++|||+|++++++    ++.+|||++||||
T Consensus        94 tag~~~~~~~~R~dll~~N~~i~~~i~~~i~~~~p~~ivivvtNPvDv~t~~~----~k~sg~p~~rV~G  159 (159)
T d2ldxa1          94 TAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVTNPVDILTYVV----WKISGFPVGRVIG  159 (159)
T ss_dssp             CCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEECSSSHHHHHHHH----HHHHCSCTTTEEE
T ss_pred             ecccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeEEEEeCCcHHHHHHHH----HHHHCcCcccccC
Confidence            99999999999999999999999999999999999999999999999999765    7889999999998

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=99.97  E-value=9.9e-32  Score=232.32  Aligned_cols=141  Identities=33%  Similarity=0.566  Sum_probs=125.3

Q ss_pred             CCCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC----CCeEEEEeCCCChhhhcCCC
Q 017551           16 GGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT----GAVVRGFLGQPQLENALTGM   89 (369)
Q Consensus        16 ~~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~----~~~v~~~~~t~dl~~al~~A   89 (369)
                      ..++.+||+|||| |.||+++++.|+++++ .||+|+|+++  ++|+++||.|...    ...+..   +++++++++||
T Consensus         3 ~~~k~~KI~IIGa-G~VG~~lA~~l~~~~~-~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~~~~~~~~~a   77 (154)
T d1pzga1           3 LVQRRKKVAMIGS-GMIGGTMGYLCALREL-ADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA---EYSYEAALTGA   77 (154)
T ss_dssp             CCSCCCEEEEECC-SHHHHHHHHHHHHHTC-CEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE---ECSHHHHHTTC
T ss_pred             cccCCCcEEEECC-CHHHHHHHHHHHhCCC-ceEEEEEeccccchhHHHHHhhhccccCCeeEEec---cCchhhhhcCC
Confidence            3567889999999 9999999999999886 5899999998  7899999999752    223332   46778899999


Q ss_pred             cEEEEcCCCCCCCCC-----CHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEE
Q 017551           90 DLVIIPAGVPRKPGM-----TRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  164 (369)
Q Consensus        90 DiVii~ag~p~k~g~-----~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG  164 (369)
                      |+||+++|.||+||+     +|.+++.+|+++++++++.+.++||+++++++|||+|++|+++    ++.+|||++||||
T Consensus        78 diVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviivsNPvd~lt~~~----~~~sg~p~~rViG  153 (154)
T d1pzga1          78 DCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPLDCMVKVM----CEASGVPTNMICG  153 (154)
T ss_dssp             SEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHH----HHHHCCCGGGEEE
T ss_pred             CeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEeCCcHHHHHHHH----HHHhCcChhcEec
Confidence            999999999999985     8999999999999999999999999999999999999999765    7888999999999


Q ss_pred             e
Q 017551          165 V  165 (369)
Q Consensus       165 ~  165 (369)
                      +
T Consensus       154 ~  154 (154)
T d1pzga1         154 M  154 (154)
T ss_dssp             C
T ss_pred             C
Confidence            6

>d1mlda2 d.162.1.1 (A:145-313) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.97  E-value=1.8e-31  Score=233.71  Aligned_cols=169  Identities=50%  Similarity=0.787  Sum_probs=146.9

Q ss_pred             echhcHHHHHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCCCCCHHHHHHHHhhhccchhhhhhhhccCCchh
Q 017551          165 VTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSAT  244 (369)
Q Consensus       165 ~t~Ld~~R~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~  244 (369)
                      +|.||++||+++||++||++|++|+++|+||||+.+++|+||++.+...+..++++++.+++++++.+|++.|.+.+++.
T Consensus         1 ~T~LDs~R~~~~la~~l~v~~~~V~~~ViGeHg~~t~vp~~s~~~~~~~~~~~~~~~l~~~v~~~~~eii~~k~~~~~~~   80 (169)
T d1mlda2           1 VTTLDIVRANAFVAELKGLDPARVSVPVIGGHAGKTIIPLISQCTPKVDFPQDQLSTLTGRIQEAGTEVVKAKAGAGSAT   80 (169)
T ss_dssp             CCHHHHHHHHHHHHHHTTCCGGGCBCCEEECSSGGGEEECGGGCBSCCCCCHHHHHHHHHHHHHHHHHHHHHHTTSCSCC
T ss_pred             CcccHHHHHHHHHHHHHCcCHHHeeEEEEEcCCCcceeehhhhhccCCCCcHHHHHHHHHHHHHhHHHHHHhhcCcChHh
Confidence            48899999999999999999999999999999776899999999888788899999999999999999999987778888


Q ss_pred             hHHHHHHHHHHHHHHhccCCCCceeEEEeecCCCCCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHHHH
Q 017551          245 LSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWLG  324 (369)
Q Consensus       245 ~s~A~a~~~li~ai~~~~~~~~~v~~~~~~~g~~~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~l~  324 (369)
                      +++++++++++.+++++.++...+.++++......+++|||+||+||++|+++++++++|+++|+++|++++    +.|+
T Consensus        81 ~~~~~a~~~~~~~i~~~~~~~~~v~~~~~~~~~~~~~v~~s~P~~ig~~Gi~~v~~l~~L~~~E~~~l~~s~----~~lk  156 (169)
T d1mlda2          81 LSMAYAGARFVFSLVDAMNGKEGVVECSFVKSQETDCPYFSTPLLLGKKGIEKNLGIGKISPFEEKMIAEAI----PELK  156 (169)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCTTCEEEEEEECCSSSSSEEEEEEEEETTEEEEECCCCSCCHHHHHHHHHHH----HHHH
T ss_pred             HHHHHHHHHHHHHhccccCCceEEEEEeeccccccCCEeEeeeEEEcCCccEEEecCCCCCHHHHHHHHHHH----HHHH
Confidence            999999999999999877555555555543322356899999999999999999997679999999999999    6666


Q ss_pred             hhhhhcccccccchHhHHHh
Q 017551          325 ESEERVSWKHSKGHLLQQEM  344 (369)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~~  344 (369)
                      ++       +++|++|.+++
T Consensus       157 ~~-------I~~g~~fi~~~  169 (169)
T d1mlda2         157 AS-------IKKGEEFVKNM  169 (169)
T ss_dssp             HH-------HHHHHHHHTTC
T ss_pred             HH-------HHHHHHHHhcC
Confidence            66       88889998764

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.97  E-value=4.1e-32  Score=233.61  Aligned_cols=138  Identities=30%  Similarity=0.507  Sum_probs=121.4

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC--CCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVIIP   95 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~--~~~v~~~~~t~dl~~al~~ADiVii~   95 (369)
                      ..||+|||| |+||++++++++++++ +||+|||+++  ++|+++||+|...  ........ +++ +++++|||+||++
T Consensus         3 ~~KI~IIGa-G~VG~~~a~~l~~~~l-~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~-~~~-~~~~~~advvvit   78 (150)
T d1t2da1           3 KAKIVLVGS-GMIGGVMATLIVQKNL-GDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSG-SNT-YDDLAGADVVIVT   78 (150)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC-CEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEE-ECC-GGGGTTCSEEEEC
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCC-CeEEEEeccCCcceeeecchhhhccccCCCcEEEe-ccc-ccccCCCcEEEEe
Confidence            469999998 9999999999998885 6999999988  7899999999752  23333322 234 5789999999999


Q ss_pred             CCCCCCCCCC-----HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe
Q 017551           96 AGVPRKPGMT-----RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  165 (369)
Q Consensus        96 ag~p~k~g~~-----r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~  165 (369)
                      +|.|++||++     |++++..|+++++++++.+.++||+++++++|||+|+||+++    ++.++||++||||+
T Consensus        79 ag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aivivvtNPvD~~t~~~----~~~sg~p~~rViG~  149 (150)
T d1t2da1          79 AGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDVMVQLL----HQHSGVPKNKIIGL  149 (150)
T ss_dssp             CSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSSHHHHHHHH----HHHHCCCGGGEEEC
T ss_pred             cccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCchHHHHHHH----HHHHCCCchheecc
Confidence            9999999976     999999999999999999999999999999999999999765    88899999999997

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=99.97  E-value=3.8e-31  Score=225.66  Aligned_cols=134  Identities=28%  Similarity=0.530  Sum_probs=111.8

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC----CCeEEEEeCCCChhhhcCCCcEEEE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT----GAVVRGFLGQPQLENALTGMDLVII   94 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~----~~~v~~~~~t~dl~~al~~ADiVii   94 (369)
                      +||+|||| |.||+++|+.|+++++. +++|+|+++  +.+.++|+.|...    ...+..   ++|+ ++++|||+||+
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~-dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~---~~d~-~~~~~advvvi   75 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELG-DIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTG---TNNY-ADTANSDVIVV   75 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCS-EEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE---ESCG-GGGTTCSEEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcc-eEEEEeeccccchhHHHHhhccccccCCCCEEEe---cCcH-HHhcCCCEEEE
Confidence            59999998 99999999999998864 899999988  6899999999862    233443   4565 67999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEE
Q 017551           95 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  164 (369)
Q Consensus        95 ~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG  164 (369)
                      ++|.|++||++|.+++..|++++++++++|.++||+++++++|||+|++|+++    ++.+|||++||||
T Consensus        76 tag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~~p~aivivvtNPvDv~t~~~----~~~sglp~~rViG  141 (142)
T d1uxja1          76 TSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPLDAMTYLA----AEVSGFPKERVIG  141 (142)
T ss_dssp             CCSCC---------CHHHHHHHHHHHHHHHGGGCTTCEEEECSSSHHHHHHHH----HHHHCCCGGGEEE
T ss_pred             eeeccCCcCcchhHHHhHHHHHHHHHHHHHhccCCCceEEEeCCchHHHHHHH----HHHHCcCcccccC
Confidence            99999999999999999999999999999999999999999999999999876    7788999999998

>d2cmda2 d.162.1.1 (A:146-312) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=2.9e-30  Score=225.34  Aligned_cols=166  Identities=51%  Similarity=0.758  Sum_probs=144.1

Q ss_pred             echhcHHHHHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCCCCCHHHHHHHHhhhccchhhhhhhhccCCchh
Q 017551          165 VTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSAT  244 (369)
Q Consensus       165 ~t~Ld~~R~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~  244 (369)
                      +|+||++||+++||+++|++|++|+++|+||||+.+++|++|++.. ..+++.+++++.+++++++.++++.+.|+|++.
T Consensus         1 ~T~LDs~R~~~~iA~~l~v~~~~V~~~ViGghg~~~~~p~~s~~~~-~~~~~~~~~~l~~~v~~~g~~ii~~~~~~~~~~   79 (167)
T d2cmda2           1 VTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQVPG-VSFTEQEVADLTKRIQNAGTEVVEAKAGGGSAT   79 (167)
T ss_dssp             CCHHHHHHHHHHHHHHHTCCGGGCCCCEEECSSTTTEEECGGGCTT-CCCCHHHHHHHHHHHHHHHHHHHHHHTTSCSCC
T ss_pred             CcccHHHHHHHHHHHHHCcCHHHeEEEEEEcCCCceEeeecccccC-CCCcHHHHHHHHHHHHhhhhhhhhhhccCcchH
Confidence            4789999999999999999999999999999998677777777654 357888899999999999999999888889999


Q ss_pred             hHHHHHHHHHHHHHHhccCCCCceeEEEeecCCCCCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHHHH
Q 017551          245 LSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWLG  324 (369)
Q Consensus       245 ~s~A~a~~~li~ai~~~~~~~~~v~~~~~~~g~~~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~l~  324 (369)
                      +|+|.++++++.+|+++.++...+..+++.....++++|||+||++|++|+++++++++|+++|+++|++++    +.|+
T Consensus        80 ~~~a~a~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~s~P~~ig~~Gv~~v~~l~~L~~~E~~~l~~s~----~~lk  155 (167)
T d2cmda2          80 LSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGML----DTLK  155 (167)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCSSCEEEEEEECCCSSCSEEEEEEEEETTEEEEECCCCCCCHHHHHHHHHHH----HHHH
T ss_pred             HHHHHHHHHHHHHHhccCCCceEEEEEcccccccCCCccccccEEEeCCceEEEeeCCCCCHHHHHHHHHHH----HHHH
Confidence            999999999999999988776555555555554567899999999999999999997679999999999999    5666


Q ss_pred             hhhhhcccccccchHhHH
Q 017551          325 ESEERVSWKHSKGHLLQQ  342 (369)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~  342 (369)
                      ++       |++|++|++
T Consensus       156 ~~-------I~~~~~fi~  166 (167)
T d2cmda2         156 KD-------IALGQEFVN  166 (167)
T ss_dssp             HH-------HHHHHHHHH
T ss_pred             HH-------HHHHHHHhc
Confidence            66       778888865

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=99.97  E-value=3.8e-30  Score=226.62  Aligned_cols=145  Identities=22%  Similarity=0.306  Sum_probs=125.2

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCC-----cEEEEEeCCC----chhHHHHhhcccCCCeEEEEeCCCChhhhcC
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLV-----SVLHLYDVVN----TPGVTADISHMDTGAVVRGFLGQPQLENALT   87 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~-----~el~L~D~~~----~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~   87 (369)
                      .+++.||+|+||+|+||+++++.|++.+..     .+|+|+|++.    +++.++|+.|+.. +.+.....+++.+++++
T Consensus        21 ~k~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~-~~~~~~~~~~~~~~~~~   99 (175)
T d7mdha1          21 WKKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLY-PLLREVSIGIDPYEVFE   99 (175)
T ss_dssp             CCCCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTC-TTEEEEEEESCHHHHTT
T ss_pred             cCCCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhccccc-ccccCccccccchhhcc
Confidence            466789999999999999999999987643     3899999987    4788999999875 33333322466789999


Q ss_pred             CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe
Q 017551           88 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  165 (369)
Q Consensus        88 ~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~  165 (369)
                      |||+||+++|.||+|||+|.|++.+|++++++++++|.+||| +++|+++|||+|++|+++   ++.++++|++||+|+
T Consensus       100 ~aDvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~NPvd~~t~ia---~k~a~~ip~~~i~~m  175 (175)
T d7mdha1         100 DVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPCNTNALIC---LKNAPDIPAKNFHAL  175 (175)
T ss_dssp             TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHH---HHTCTTSCGGGEEEC
T ss_pred             CCceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEecCcHHHHHHHH---HHHCCCCCHHHEeCC
Confidence            999999999999999999999999999999999999999997 799999999999999876   244799999999986

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.96  E-value=7.4e-30  Score=220.40  Aligned_cols=143  Identities=26%  Similarity=0.460  Sum_probs=120.9

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcE-----EEEEeCCC----chhHHHHhhcccCCCeEEEEeCCCChhhhcCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSV-----LHLYDVVN----TPGVTADISHMDTGAVVRGFLGQPQLENALTG   88 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~e-----l~L~D~~~----~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~   88 (369)
                      ++++||+||||+|+||+++++.|++++++++     +.|+|.+.    ..+.++|+.|+.. +.++....+++.+++++|
T Consensus         2 ~~p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~   80 (154)
T d1y7ta1           2 KAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAF-PLLAGLEATDDPKVAFKD   80 (154)
T ss_dssp             CCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTC-TTEEEEEEESCHHHHTTT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhcccc-ccccccccCCchhhhccc
Confidence            5789999999989999999999999987654     56666655    4677788888764 333333334556799999


Q ss_pred             CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEE
Q 017551           89 MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  164 (369)
Q Consensus        89 ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG  164 (369)
                      ||+||+++|.||+|||+|++++.+|+++++++++.+.+||| +++++++|||+|++|+++   +++++|||++|||.
T Consensus        81 advViitaG~~~~pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvsNPvDv~t~~a---~k~asg~p~~rvia  154 (154)
T d1y7ta1          81 ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIA---YKNAPGLNPRNFTA  154 (154)
T ss_dssp             CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHH---HHTCTTSCGGGEEE
T ss_pred             ccEEEeecCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEecCcHHHHHHHH---HHHcCCCcHHhccC
Confidence            99999999999999999999999999999999999999996 799999999999999875   35579999999985

>d1uxja2 d.162.1.1 (A:144-307) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=99.96  E-value=6e-30  Score=223.12  Aligned_cols=153  Identities=29%  Similarity=0.427  Sum_probs=136.1

Q ss_pred             hhcHHHHHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCC-----CCCHHHHHHHHhhhccchhhhhhhhccCC
Q 017551          167 MLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-----SFTQEETEYLTNRIQNGGTEVVEAKAGAG  241 (369)
Q Consensus       167 ~Ld~~R~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~-----~~~~~~~~~l~~~v~~~~~ev~~~k~g~g  241 (369)
                      +||++||+++||++||++|++|+++||||||+ +++|+||++++++     .++++.++++.+++++++++|++++ ++|
T Consensus         3 ~LD~~R~~~~lA~~l~v~~~~V~~~ViG~Hg~-~~v~~~s~~~i~g~~~~~~~~~~~~~~~~~~v~~~g~~ii~~~-~kg   80 (164)
T d1uxja2           3 VLDAARYRTFIAMEAGVSVKDVQAMLMGGHGD-EMVPLPRFSTISGIPVSEFIAPDRLAQIVERTRKGGGEIVNLL-KTG   80 (164)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGEEECCEECSGG-GEECCGGGEEETTEEGGGTSCHHHHHHHHHHHHTHHHHHHHHH-SSS
T ss_pred             ccHHHHHHHHHHHHHCcCHHHeEEEEEcCCCC-ceeeeeeeeecCCCchhhccchhhHHHHHHHHHHHHHHHHHHH-hcC
Confidence            69999999999999999999999999999999 9999999998864     2456778899999999999999876 789


Q ss_pred             chhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHH
Q 017551          242 SATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCF  319 (369)
Q Consensus       242 ~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i  319 (369)
                      ++.|++|.++++++++|+++.++   +++++ +++|+| .++++||+||++|++|+++++++ +|+++|+++|++++..+
T Consensus        81 s~~~a~a~a~~~i~~~i~~~~~~---~~~~~~~~~g~ygi~~~~~s~P~~ig~~Gv~~v~~l-~L~~~E~~~l~~s~~~l  156 (164)
T d1uxja2          81 SAYYAPAAATAQMVEAVLKDKKR---VMPVAAYLTGQYGLNDIYFGVPVILGAGGVEKILEL-PLNEEEMALLNASAKAV  156 (164)
T ss_dssp             CCCHHHHHHHHHHHHHHHTTCCE---EEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHH
T ss_pred             cccchHHHHHHHHHHHHhCCCCc---eeeeeeeeccccCCCCceEEECeEEeCCeeEEEeCC-CCCHHHHHHHHHHHHHH
Confidence            99999999999999999997663   66554 789999 67899999999999999999996 99999999999999666


Q ss_pred             HHHHHh
Q 017551          320 QDWLGE  325 (369)
Q Consensus       320 ~~~l~~  325 (369)
                      +..++.
T Consensus       157 k~~i~~  162 (164)
T d1uxja2         157 RATLDT  162 (164)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            665544

>d7mdha2 d.162.1.1 (A:198-385) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=99.96  E-value=8.3e-30  Score=226.93  Aligned_cols=169  Identities=18%  Similarity=0.143  Sum_probs=137.8

Q ss_pred             chhcHHHHHHHHHHHhCCCCCCCc-eeEEeecCCCccccccccCCCCCC-----CCHHH--HHHHHhhhccchhhhhhhh
Q 017551          166 TMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHAGVTILPLLSQVKPPCS-----FTQEE--TEYLTNRIQNGGTEVVEAK  237 (369)
Q Consensus       166 t~Ld~~R~~~~la~~lgv~~~~V~-~~viG~hg~~~~vp~~S~~~~~~~-----~~~~~--~~~l~~~v~~~~~ev~~~k  237 (369)
                      |.||++||+++||+++||+|++|+ ++||||||+ +++|+||++++.+.     ..++.  .+++.++++++++++++.|
T Consensus         1 T~LDs~R~r~~lA~~l~V~~~~V~~~iI~GeHGd-s~vp~~S~a~v~g~~l~~~~~~~~~~~~~~~~~v~~~~~~ii~~k   79 (188)
T d7mdha2           1 TRLDENRAKCQLALKAGVFYDKVSNVTIWGNHST-TQVPDFLNAKIDGRPVKEVIKRTKWLEEEFTITVQKRGGALIQKW   79 (188)
T ss_dssp             CHHHHHHHHHHHHHHTTSCGGGEECCEEEBCSST-TCEEECSSCEETTEEGGGTCCCHHHHHHHHHHHHHTHHHHHHHHT
T ss_pred             CccHHHHHHHHHHHHHCcCHHHeeEEEEEEcCCC-cEeeeeeccEeeccchhhcccchhhhHHHHHHHHhhhHHHHHHhh
Confidence            679999999999999999999997 568899999 99999999998541     23333  4789999999999999976


Q ss_pred             ccCCchhhHHHHHHHHHHHHHHhccCCCCceeEE-EeecCC-C--CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHH
Q 017551          238 AGAGSATLSMAYAAVKFADACLRGLRGDAGVVEC-AFVASQ-V--TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFC  313 (369)
Q Consensus       238 ~g~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~-~~~~g~-~--~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~  313 (369)
                        ++++++|+|.|+++++++|+++++... ++++ .+++|+ |  ++++|||+||++|++|+++++...+|+++|+++|+
T Consensus        80 --g~s~~~s~A~A~~~~~~ai~~~~~~~~-~~s~~v~~~g~~YGi~~~v~~s~Pv~ig~~G~~~iv~~l~L~~~e~~~l~  156 (188)
T d7mdha2          80 --GRSSAASTAVSIADAIKSLVTPTPEGD-WFSTGVYTTGNPYGIAEDIVFSMPCRSKGDGDYELATDVSNDDFLWERIK  156 (188)
T ss_dssp             --SSCCHHHHHHHHHHHHHHHHSCCCTTC-CEEEEEECTTCSSCCCSSSEEEEEEECCSSSCCEECCCCCCCHHHHHHHH
T ss_pred             --cccchhhHHHHHHHHHHHHHcCCCCCc-eEEEEEEeCCCccCCCCCeEEEEeeEECCCccEEEeCCCCCCHHHHHHHH
Confidence              356777899999999999999987544 4444 467885 8  57999999999999999999753499999999999


Q ss_pred             HHHHHHHHHHHhhhhhcccccccchHhHHHhhhhh
Q 017551          314 LLHLCFQDWLGESEERVSWKHSKGHLLQQEMKRCQ  348 (369)
Q Consensus       314 ~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  348 (369)
                      .+++    .|++..+.|+      .++.+++++|+
T Consensus       157 ~S~~----eL~~e~~~v~------~Llg~~~~~~~  181 (188)
T d7mdha2         157 KSEA----ELLAEKKCVA------HLTGEGNAYCD  181 (188)
T ss_dssp             HHHH----HHHHHHHHTH------HHHTSSSCCCC
T ss_pred             HHHH----HHHHHHHHHH------HhhccccccCC
Confidence            9994    3444444444      45666777887

>d1guza2 d.162.1.1 (A:143-305) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=99.96  E-value=1.2e-29  Score=221.11  Aligned_cols=151  Identities=27%  Similarity=0.459  Sum_probs=134.5

Q ss_pred             hhcHHHHHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCCC-----CCHHHHHHHHhhhccchhhhhhhhccCC
Q 017551          167 MLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCS-----FTQEETEYLTNRIQNGGTEVVEAKAGAG  241 (369)
Q Consensus       167 ~Ld~~R~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~~-----~~~~~~~~l~~~v~~~~~ev~~~k~g~g  241 (369)
                      +||++||+++||+++|++|++|+++||||||+ +++|+||++++.+.     ++++.++++.+++++++.+|++.+ |+|
T Consensus         3 ~LDs~R~~~~lA~~l~v~~~~V~~~ViG~Hg~-s~vp~~s~~~i~g~~~~~~~~~~~~~~~~~~v~~~g~~ii~~~-~kg   80 (163)
T d1guza2           3 VLDAARFRSFIAMELGVSMQDINACVLGGHGD-AMVPVVKYTTVAGIPISDLLPAETIDKLVERTRNGGAEIVEHL-KQG   80 (163)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGEECCEEECSGG-GEEECGGGCEETTEEHHHHSCHHHHHHHHHHHHTHHHHHHHHH-SSS
T ss_pred             ccHHHHHHHHHHHHHCcCHHHeEEEEEcCCCC-CcccCHhhcccCCccccccCCHHHHHHHHHHHHHHHHHHHHHh-cCC
Confidence            69999999999999999999999999999999 89999999998642     566778899999999999999864 789


Q ss_pred             chhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHH
Q 017551          242 SATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCF  319 (369)
Q Consensus       242 ~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i  319 (369)
                      ++.|++|.++++++++++.+.+   .+++++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|+++++.|
T Consensus        81 sa~~a~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~g~~~~~~s~P~~lg~~Gv~~i~~l-~Ls~~E~~~l~~sa~~l  156 (163)
T d1guza2          81 SAFYAPASSVVEMVESIVLDRK---RVLPCAVGLEGQYGIDKTFVGVPVKLGRNGVEQIYEI-NLDQADLDLLQKSAKIV  156 (163)
T ss_dssp             CCCHHHHHHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHH
T ss_pred             CcchhHHHHHHHHHHheeccCC---CEEEEeeeeccccCCCCcEEEEeeEEcCCeeEEEecC-CCCHHHHHHHHHHHHHH
Confidence            9999999999999999998765   366665 778988 77999999999999999999996 89999999999999655


Q ss_pred             HHHH
Q 017551          320 QDWL  323 (369)
Q Consensus       320 ~~~l  323 (369)
                      ++.+
T Consensus       157 ~~~i  160 (163)
T d1guza2         157 DENC  160 (163)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5444

>d1ojua2 d.162.1.1 (A:164-331) Lactate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.96  E-value=1.7e-29  Score=217.12  Aligned_cols=145  Identities=18%  Similarity=0.236  Sum_probs=125.7

Q ss_pred             chhcHHHHHHHHHHHhCCCCCCC-ceeEEeecCCCccccccccCCCCCCCCHHHHHHHHhhhccchhhhhhhhccCCchh
Q 017551          166 TMLDVVRANTFVAEVLGLDPRDV-DVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSAT  244 (369)
Q Consensus       166 t~Ld~~R~~~~la~~lgv~~~~V-~~~viG~hg~~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~  244 (369)
                      |.||++|||++|++..+   .++ +++|+||||+ +++|+||.+++.+..   +++++.+++++++++|++.|   |+|+
T Consensus         2 t~LDsaR~r~~l~~~~~---~~v~~a~ViGeHGd-s~vp~~S~~~i~g~~---~~~~i~~~v~~~g~eIi~~k---G~t~   71 (152)
T d1ojua2           2 NQLDSQRLKERLYNAGA---RNIRRAWIIGEHGD-SMFVAKSLADFDGEV---DWEAVENDVRFVAAEVIKRK---GATI   71 (152)
T ss_dssp             HHHHHHHHHHHHHHTTC---BSCCCCCEEBCSST-TCEECGGGCCCBSCC---CHHHHHHHHHTTHHHHHHHH---SSCC
T ss_pred             CccHHHHHHHHHHccCC---CCcceeEEEecCCC-ccccccccccccCcc---chhHhHHHHHHHHHHhhhhc---ccee
Confidence            67999999999987654   445 8999999998 999999999986433   45688899999999999965   8999


Q ss_pred             hHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 017551          245 LSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDW  322 (369)
Q Consensus       245 ~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~  322 (369)
                      |++|.++++++++|++|.+   .++|++ +++|+| .+|+|+|+||+||++|++ ++++ +|+++|+++|+++++.+++.
T Consensus        72 ~gia~a~~~iv~aIl~d~~---~v~pvs~~l~geyG~~dv~lsvP~vig~~Gve-i~~l-~L~~~E~~~l~~Sa~~ik~~  146 (152)
T d1ojua2          72 FGPAVAIYRMVKAVVEDTG---EIIPTSMILQGEYGIENVAVGVPAKLGKNGAE-VADI-KLSDEEIEKLRNSAKILRER  146 (152)
T ss_dssp             HHHHHHHHHHHHHHHTTCC---CEEEEEEEEESGGGCEEEEEEEEEEEETTEEE-ECCC-CCCHHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHhcCC---CceeeeEEeccccCCCCEEEEeEEEECCCceE-EEcC-CCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999865   488886 789999 678999999999999985 8885 99999999999999766666


Q ss_pred             HHh
Q 017551          323 LGE  325 (369)
Q Consensus       323 l~~  325 (369)
                      +++
T Consensus       147 i~~  149 (152)
T d1ojua2         147 LEE  149 (152)
T ss_dssp             HHT
T ss_pred             HHH
Confidence            543

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.96  E-value=9.1e-30  Score=219.83  Aligned_cols=143  Identities=22%  Similarity=0.380  Sum_probs=118.8

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCC-----CcEEEEEeCCC----chhHHHHhhcccCCCeEEEEeCCCChhhhcCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPL-----VSVLHLYDVVN----TPGVTADISHMDTGAVVRGFLGQPQLENALTG   88 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~-----~~el~L~D~~~----~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~   88 (369)
                      ++|+||+||||+|+||+++++.|+++++     ..+|+|+|+++    +++..+|+.|+... .......+++.+++++|
T Consensus         1 s~p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~   79 (154)
T d5mdha1           1 SEPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALP-LLKDVIATDKEEIAFKD   79 (154)
T ss_dssp             CCCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCT-TEEEEEEESCHHHHTTT
T ss_pred             CCceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccc-cccccccCcccccccCC
Confidence            4689999999889999999999987654     35899999987    34455566666542 23322224566799999


Q ss_pred             CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCe-EEEEecCCCCChhHHHHHHHHHhC-CCCCCcEEEe
Q 017551           89 MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNA-TVNLISNPVNSTVPIAAEVFKKAG-TYDPKKLLGV  165 (369)
Q Consensus        89 ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a-~viv~tNPv~~~t~i~ae~~~~~~-~~~~~kviG~  165 (369)
                      ||+||+++|.||+|||+|.+++.+|+++++++++.|.++||++ ++|++|||+|++|+++    ++.+ ++|++||+|+
T Consensus        80 ~dvVVitag~~~~~g~sr~dll~~N~~i~k~~~~~i~k~a~~~~~iivvsNPvD~mt~v~----~k~s~g~P~~~v~~m  154 (154)
T d5mdha1          80 LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPANTNCLTA----SKSAPSIPKENFSCL  154 (154)
T ss_dssp             CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHH----HHTCTTSCGGGEEEC
T ss_pred             ceEEEEecccCCCCCCchhHHHHHhHHHHHHHHHHHHhhCCCceEEEEecCcHHHHHHHH----HHHcCCCCHHHEeCC
Confidence            9999999999999999999999999999999999999999865 6788999999999765    6766 9999999985

>d1llda2 d.162.1.1 (A:150-319) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=99.96  E-value=2.4e-29  Score=220.35  Aligned_cols=150  Identities=15%  Similarity=0.278  Sum_probs=131.5

Q ss_pred             chhcHHHHHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCC-------------CCCHHHHHHHHhhhccchhh
Q 017551          166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-------------SFTQEETEYLTNRIQNGGTE  232 (369)
Q Consensus       166 t~Ld~~R~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~-------------~~~~~~~~~l~~~v~~~~~e  232 (369)
                      |+||++||+++||+++|+++++|+++|||+||+ +++|+||++++.+             .++.+.++++.++++.++.+
T Consensus         1 T~LDs~R~~~~lA~~l~v~~~~V~~~ViG~Hg~-~~vp~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~i~~~v~~~g~~   79 (170)
T d1llda2           1 TNLDSARLRFLIAQQTGVNVKNVHAYIAGEHGD-SEVPLWESATIGGVPMSDWTPLPGHDPLDADKREEIHQEVKNAAYK   79 (170)
T ss_dssp             THHHHHHHHHHHHHHHTCCGGGEECCEEBSSST-TCEECTTSCEETTEEGGGCCCCTTCCCCCHHHHHHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHCcCHHHeEEEEEcCCCC-CcccchhhcccCCCchhhhcccccccccchhhHHHHHHHHhhhhhH
Confidence            689999999999999999999999999999999 9999999987632             23456678999999999999


Q ss_pred             hhhhhccCCchhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHH
Q 017551          233 VVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESG  310 (369)
Q Consensus       233 v~~~k~g~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~  310 (369)
                      |++.   +|++.|++|.++++++++++++..   .+++++ +++|+| .+++|||+||++|++|+++++++ +|+++|++
T Consensus        80 i~~~---kg~t~~~~a~~~~~~~~~i~~~~~---~~~~~~~~~~~~~g~~~i~~s~P~~lg~~Gv~~i~~l-~L~~~E~~  152 (170)
T d1llda2          80 IING---KGATNYAIGMSGVDIIEAVLHDTN---RILPVSSMLKDFHGISDICMSVPTLLNRQGVNNTINT-PVSDKELA  152 (170)
T ss_dssp             HHTS---CCSCCHHHHHHHHHHHHHHHTTCC---EEEEEEEECSSBTTBCSSEEEEEEEEETTEEECCSCC-CCCHHHHH
T ss_pred             HHhh---hccchhhhHHHHHHHHHHHHcCCC---ceeeeeccccCccCCCCeeEeeccEEcCCeeEEEecC-CCCHHHHH
Confidence            9984   588999999999999999998765   355554 789988 78999999999999999999996 99999999


Q ss_pred             HHHHHHHHHHHHH
Q 017551          311 LFCLLHLCFQDWL  323 (369)
Q Consensus       311 ~L~~~~~~i~~~l  323 (369)
                      +|++++..|++.+
T Consensus       153 ~l~~sa~~lk~~~  165 (170)
T d1llda2         153 ALKRSAETLKETA  165 (170)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999995554433

>d1pzga2 d.162.1.1 (A:164-334) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=99.96  E-value=5.1e-29  Score=219.00  Aligned_cols=152  Identities=28%  Similarity=0.396  Sum_probs=129.6

Q ss_pred             chhcHHHHHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCC----------CCCHHHHHHHHhhhccchhhhhh
Q 017551          166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVE  235 (369)
Q Consensus       166 t~Ld~~R~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~----------~~~~~~~~~l~~~v~~~~~ev~~  235 (369)
                      |+||++||+++||+++|++|++|+++||||||+ +++|+||++++.+          .....++.+...+.+.++.+++.
T Consensus         2 c~LDs~R~~~~lA~~l~v~~~~V~~~ViG~Hg~-t~vp~~S~~~i~g~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   80 (174)
T d1pzga2           2 CMLDSGRFRRYVADALSVSPRDVQATVIGTHGD-CMVPLVRYITVNGYPIQKFIKDGVVTEKQLEEIAEHTKVSGGEIVR   80 (174)
T ss_dssp             HHHHHHHHHHHHHHHHTSCGGGEECCEEBCSST-TCEECGGGCEETTEEHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHhCcCHHHcEEEEEccCCC-ccccceeeeeECCEechhhccccchhhhhhhhhhheeeccceeEee
Confidence            899999999999999999999999999999998 9999999998753          13344556666667777888877


Q ss_pred             hhccCCchhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHH
Q 017551          236 AKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFC  313 (369)
Q Consensus       236 ~k~g~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~  313 (369)
                      .+ ++|+++|++|.++++++++++++.+   .+++++ +.+|+| .+++|||+||+||++|+++++++ +|+++|+++|+
T Consensus        81 ~~-~~gst~~~~a~a~~~~~~~i~~~~~---~~~~~s~~~~~~yGi~~v~~s~Pv~ig~~Gi~~v~~l-~l~~~E~~~l~  155 (174)
T d1pzga2          81 FL-GQGSAYYAPAASAVAMATSFLNDEK---RVIPCSVYCNGEYGLKDMFIGLPAVIGGAGIERVIEL-ELNEEEKKQFQ  155 (174)
T ss_dssp             HH-SSSCCCHHHHHHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHH
T ss_pred             ee-cccchhhhhHHHHHHHHHhhcccCC---ceEEeeeccccccCCCCceeeeeeEEcCCcEEEEeCC-CCCHHHHHHHH
Confidence            65 7899999999999999999998765   366665 678988 55799999999999999999996 89999999999


Q ss_pred             HHHHHHHHHH
Q 017551          314 LLHLCFQDWL  323 (369)
Q Consensus       314 ~~~~~i~~~l  323 (369)
                      +++..++.+.
T Consensus       156 ~s~~~l~~~~  165 (174)
T d1pzga2         156 KSVDDVMALN  165 (174)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9995554433

>d1ez4a2 d.162.1.1 (A:163-334) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=99.96  E-value=3.8e-29  Score=219.05  Aligned_cols=150  Identities=20%  Similarity=0.320  Sum_probs=131.8

Q ss_pred             chhcHHHHHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCC----------CCCHHHHHHHHhhhccchhhhhh
Q 017551          166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVE  235 (369)
Q Consensus       166 t~Ld~~R~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~----------~~~~~~~~~l~~~v~~~~~ev~~  235 (369)
                      |+||++||+++||+++|++|++|+++|||+||+ +++|+||++++.+          .+..+++.++.+++++++.++++
T Consensus         1 T~LD~~R~~~~lA~~l~v~~~~V~~~ViG~Hg~-t~vp~~s~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   79 (171)
T d1ez4a2           1 TSLDSSRLRVALGKQFNVDPRSVDAYIMGEHGD-SEFAAYSTATIGTRPVRDVAKEQGVSDDDLAKLEDGVRNKAYDIIN   79 (171)
T ss_dssp             THHHHHHHHHHHHHHHTCCGGGEECCEESSSSS-SCEECGGGCEETTEEHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHCcCHHHeEEEEEccCCC-cccccccccccCCccceeecccccccchhhhhheeehhhhhHHHHH
Confidence            689999999999999999999999999999998 9999999998853          25566788899999999999988


Q ss_pred             hhccCCchhhHHHHHHHHHHHHHHhccCCCCceeEE-EeecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHH
Q 017551          236 AKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVEC-AFVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFC  313 (369)
Q Consensus       236 ~k~g~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~-~~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~  313 (369)
                      .+   |++.|++|.++++++++++++.+   .++++ ++++++| .+++|||+||++|++|+++++++ +|+++|+++|+
T Consensus        80 ~k---~s~~~a~a~~~~~~~~~i~~~~~---~~~~~~~~~~~~~g~~~~~~S~Pv~lg~~Gv~~v~~l-~Ls~~E~~~l~  152 (171)
T d1ez4a2          80 LK---GATFYGIGTALMRISKAILRDEN---AVLPVGAYMDGQYGLNDIYIGTPAIIGGTGLKQIIES-PLSADELKKMQ  152 (171)
T ss_dssp             HH---SCCCHHHHHHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHH
T ss_pred             hh---hhHhHHHHHHHHHHHHHHhccCC---ceEEEEEeeccccCccceeeeEEEEEcCCcEEEEeCC-CCCHHHHHHHH
Confidence            54   89999999999999999998765   35555 4789998 77999999999999999999996 89999999999


Q ss_pred             HHHHHHHHHH
Q 017551          314 LLHLCFQDWL  323 (369)
Q Consensus       314 ~~~~~i~~~l  323 (369)
                      +++..++..+
T Consensus       153 ~s~~~l~~~i  162 (171)
T d1ez4a2         153 DSAATLKKVL  162 (171)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9995444433

>d1y6ja2 d.162.1.1 (A:149-317) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=99.96  E-value=2.3e-29  Score=220.30  Aligned_cols=153  Identities=20%  Similarity=0.323  Sum_probs=131.4

Q ss_pred             chhcHHHHHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCCC------------CCHHHHHHHHhhhccchhhh
Q 017551          166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCS------------FTQEETEYLTNRIQNGGTEV  233 (369)
Q Consensus       166 t~Ld~~R~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~~------------~~~~~~~~l~~~v~~~~~ev  233 (369)
                      |+||++||+++||+++|++|++|+++||||||+ +++|+||++++.+.            ++.++++++.+++++.+.++
T Consensus         1 T~LDs~R~~~~la~~lgv~~~~V~~~ViG~Hg~-t~vp~~s~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   79 (169)
T d1y6ja2           1 TVLDSIRFRYLLSEKLGVDVKNVHGYIIGEHGD-SQLPLWSCTHIAGKNINEYIDDPKCNFTEEDKKKIAEDVKTAGATI   79 (169)
T ss_dssp             THHHHHHHHHHHHTTTTCCTTTEECCEEBCSSS-SCEECCTTCEETTBCSCCC-----------CCHHHHHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHhCcCHHHceEEEEccCCC-CCccCeeecccCchhHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhh
Confidence            689999999999999999999999999999999 99999999987431            23345578888999999998


Q ss_pred             hhhhccCCchhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHH
Q 017551          234 VEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGL  311 (369)
Q Consensus       234 ~~~k~g~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~  311 (369)
                      ++.   +|++.|++|.++++++++++.+.+.   +++++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++
T Consensus        80 ~~~---~~s~~~a~a~~~~~~~~~i~~~~~~---~~~~~~~~~g~yg~~~i~~s~Pv~lg~~Gv~~i~~l-~Ls~~E~~~  152 (169)
T d1y6ja2          80 IKN---KGATYYGIAVSINTIVETLLKNQNT---IRTVGTVINGMYGIEDVAISLPSIVNSEGVQEVLQF-NLTPEEEEA  152 (169)
T ss_dssp             HHH---TSCCCHHHHHHHHHHHHHHHHTCCC---EECCEEEECSBTTBCSEEEECCEEEETTEEEECCCC-CCCHHHHHH
T ss_pred             hhh---hhhhhhHHHHHHHHHHHHhccCCCC---ceeeeeeeccccCCcccceeeeeEEcCCcEEEEecC-CCCHHHHHH
Confidence            884   5899999999999999999998653   66664 889999 56999999999999999999996 899999999


Q ss_pred             HHHHHHHHHHHHHhh
Q 017551          312 FCLLHLCFQDWLGES  326 (369)
Q Consensus       312 L~~~~~~i~~~l~~~  326 (369)
                      |+++++.++..+++.
T Consensus       153 l~~s~~~lk~~~~~v  167 (169)
T d1y6ja2         153 LRFSAEQVKKVLNEV  167 (169)
T ss_dssp             HHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999997666666543

>d1a5za2 d.162.1.1 (A:164-333) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.95  E-value=1.9e-28  Score=214.73  Aligned_cols=153  Identities=24%  Similarity=0.373  Sum_probs=134.4

Q ss_pred             chhcHHHHHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCC-----------CCCHHHHHHHHhhhccchhhhh
Q 017551          166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-----------SFTQEETEYLTNRIQNGGTEVV  234 (369)
Q Consensus       166 t~Ld~~R~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~-----------~~~~~~~~~l~~~v~~~~~ev~  234 (369)
                      |+||++||+++||+++|++|++|+++|||+||+ +++|+||++++.+           .+..+.++++.++++..+.+++
T Consensus         2 T~LDs~R~~~~lA~~l~v~~~~V~~~ViG~Hg~-t~vp~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~   80 (172)
T d1a5za2           2 TVLDTARLRTLIAQHCGFSPRSVHVYVIGEHGD-SEVPVWSGAMIGGIPLQNMCQVCQKCDSKILENFAEKTKRAAYEII   80 (172)
T ss_dssp             THHHHHHHHHHHHHHHTCCGGGEECCEEBCSST-TCEECGGGCEETTEEHHHHHTTSSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHCcCHHHeEEEEEecCCC-CcccchhhcccCCcchhhhhhccccccHHHhhhhHHHHhccceeEe
Confidence            689999999999999999999999999999998 9999999998742           2556667889999999999998


Q ss_pred             hhhccCCchhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHH
Q 017551          235 EAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLF  312 (369)
Q Consensus       235 ~~k~g~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L  312 (369)
                      +.+   |++.|++|.++++++.+++.+.+   .+++++ +.+|+| .+++|||+||++|++|+++++++ +|+++|+++|
T Consensus        81 ~~~---~~~~~~~a~a~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~v~~s~P~~lg~~Gv~~v~~l-~Ls~~E~~~l  153 (172)
T d1a5za2          81 ERK---GATHYAIALAVADIVESIFFDEK---RVLTLSVYLEDYLGVKDLCISVPVTLGKHGVERILEL-NLNEEELEAF  153 (172)
T ss_dssp             HHH---SCCCHHHHHHHHHHHHHHHTTCC---EEEEEEEEESSBTTBCSEEEEEEEEEETTEEEEECCC-CCCHHHHHHH
T ss_pred             ecc---ccchhhHHHHHHHHHHHHHhhcc---cceeeecccccccccCCeeEeeeEEEcCCceEEEeCC-CCCHHHHHHH
Confidence            854   78999999999999999998754   366554 778888 77999999999999999999996 8999999999


Q ss_pred             HHHHHHHHHHHHhh
Q 017551          313 CLLHLCFQDWLGES  326 (369)
Q Consensus       313 ~~~~~~i~~~l~~~  326 (369)
                      ++++..|++.+++.
T Consensus       154 ~~sa~~lk~~i~~l  167 (172)
T d1a5za2         154 RKSASILKNAINEI  167 (172)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99997777766655

>d5mdha2 d.162.1.1 (A:155-333) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.95  E-value=2.3e-28  Score=215.91  Aligned_cols=157  Identities=19%  Similarity=0.163  Sum_probs=129.6

Q ss_pred             chhcHHHHHHHHHHHhCCCCCCCceeE-EeecCCCccccccccCCCCCC-----------CCHHHHHHHHhhhccchhhh
Q 017551          166 TMLDVVRANTFVAEVLGLDPRDVDVPV-VGGHAGVTILPLLSQVKPPCS-----------FTQEETEYLTNRIQNGGTEV  233 (369)
Q Consensus       166 t~Ld~~R~~~~la~~lgv~~~~V~~~v-iG~hg~~~~vp~~S~~~~~~~-----------~~~~~~~~l~~~v~~~~~ev  233 (369)
                      |+||++|||++||+++||+|++|+++| ||+||+ +++|+||++++.+.           +.+...+++.+++++++.+|
T Consensus         1 T~LDs~R~r~~la~~l~V~~~~V~~~vI~GeHG~-s~vp~~S~a~v~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i   79 (179)
T d5mdha2           1 TRLDHNRAKAQIALKLGVTSDDVKNVIIWGNHSS-TQYPDVNHAKVKLQAKEVGVYEAVKDDSWLKGEFITTVQQRGAAV   79 (179)
T ss_dssp             CHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST-TCEEECTTCEEECSSCEEEHHHHHCCHHHHHTHHHHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHHCcCHHHcEEEEEEEcCCC-cccccchhceecCcchhhhhhhccccchhhHHHHHHHHHhccHhh
Confidence            689999999999999999999998755 599999 99999999998532           22234567888899999999


Q ss_pred             hhhhccCCchhhHHHHHHHHHHHHHHhccCCCCceeEEEeecC-CC--CCccEEEEEEEEcCCCeEEEccCCCCCHHHHH
Q 017551          234 VEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVAS-QV--TELPFFASKVRLGRQGAEEIFQLGPLNEYESG  310 (369)
Q Consensus       234 ~~~k~g~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~~~~g-~~--~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~  310 (369)
                      ++.|  +++++|++|.|+++++++|+++.++...+..+.+.+| +|  ++++|||+||++|++|++++.++ +|+++|++
T Consensus        80 ~~~~--~~ss~~~~a~a~~~~~~~i~~~~~~~~~~s~~v~~~g~~yGi~~~v~~s~P~~lg~~Gv~~v~~l-~L~~~E~~  156 (179)
T d5mdha2          80 IKAR--KLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDGNSYGVPDDLLYSFPVTIKDKTWKIVEGL-PINDFSRE  156 (179)
T ss_dssp             HHHH--SSCCCHHHHHHHHHHHHHHHHCCCTTCCEEEEEECTTCSSSCCSSCEEEEEEEEETTEEEECCCC-CCCHHHHH
T ss_pred             hhcc--CcchHHHHHHHHHHHHHHHHhhcccCCceeEEEEccCcccCCccceEEeeeEEEcCCcEEEEeCC-CCCHHHHH
Confidence            9865  4678899999999999999998876543333346776 56  68999999999999999999996 89999999


Q ss_pred             HHHHHHHHHHHHHHhh
Q 017551          311 LFCLLHLCFQDWLGES  326 (369)
Q Consensus       311 ~L~~~~~~i~~~l~~~  326 (369)
                      +|++++..+++.++..
T Consensus       157 ~l~~Sa~~L~~~~~~~  172 (179)
T d5mdha2         157 KMDLTAKELAEEKETA  172 (179)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999995554444433

>d1i0za2 d.162.1.1 (A:161-332) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=99.95  E-value=2.6e-28  Score=213.76  Aligned_cols=150  Identities=17%  Similarity=0.227  Sum_probs=129.6

Q ss_pred             chhcHHHHHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCCC------------CCHHHHHHHHhhhccchhhh
Q 017551          166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCS------------FTQEETEYLTNRIQNGGTEV  233 (369)
Q Consensus       166 t~Ld~~R~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~~------------~~~~~~~~l~~~v~~~~~ev  233 (369)
                      |.||++||+++||+++|++|++|+++|||+||+ +++|+||++++.+.            ...+.++++.++++.++.++
T Consensus         3 T~LDs~R~~~~lA~~lgv~~~~V~~~ViG~Hg~-~~vp~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~   81 (172)
T d1i0za2           3 CNLDSARFRYLMAEKLGIHPSSCHGWILGEHGD-SSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVVESAYEV   81 (172)
T ss_dssp             THHHHHHHHHHHHHHHTSCGGGCBCCEEBCSST-TCEECGGGCEETTEEHHHHCTTTTSSSCSSCTHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHhCcCHHHceEEEEccCCC-cccccHhhceeCCeeHHHhhhhhccchhHHHHHHHHHHhccceEEe
Confidence            789999999999999999999999999999999 99999999987531            22334678888999999999


Q ss_pred             hhhhccCCchhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC--CCccEEEEEEEEcCCCeEEEccCCCCCHHHHH
Q 017551          234 VEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYESG  310 (369)
Q Consensus       234 ~~~k~g~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~  310 (369)
                      ++.+   +++.+++|.++++++++++.+.+   .+++++ +++|+|  ++++|||+||++|++|++++.++ +|+++|++
T Consensus        82 ~~~~---~~s~~a~a~~~~~~~~~~~~~~~---~v~~~~~~~~g~YGi~~~i~~s~Pv~lg~~Gv~~v~~l-~L~~~E~~  154 (172)
T d1i0za2          82 IKLK---GYTNWAIGLSVADLIESMLKNLS---RIHPVSTMVKGMYGIENEVFLSLPCILNARGLTSVINQ-KLKDDEVA  154 (172)
T ss_dssp             HHHH---SSCCHHHHHHHHHHHHHHHTTCC---EEEEEEEECTTSTTCCSCCEEEEEEEEETTEEEEECCC-CCCHHHHH
T ss_pred             eecc---cccchHHHHHHHHHHHHHhcCCC---cccccceeccCcCCCcCCEEEEEEEEecCCcEEEEeCC-CCCHHHHH
Confidence            8854   78999999999999999998754   477776 679998  56899999999999999999996 99999999


Q ss_pred             HHHHHHHHHHHHH
Q 017551          311 LFCLLHLCFQDWL  323 (369)
Q Consensus       311 ~L~~~~~~i~~~l  323 (369)
                      +|++++..++++.
T Consensus       155 ~l~~Sa~~l~~~~  167 (172)
T d1i0za2         155 QLKKSADTLWDIQ  167 (172)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999995554443

>d1t2da2 d.162.1.1 (A:151-315) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.95  E-value=3.7e-28  Score=211.77  Aligned_cols=148  Identities=26%  Similarity=0.371  Sum_probs=130.2

Q ss_pred             hhcHHHHHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCC----------CCCHHHHHHHHhhhccchhhhhhh
Q 017551          167 MLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEA  236 (369)
Q Consensus       167 ~Ld~~R~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~----------~~~~~~~~~l~~~v~~~~~ev~~~  236 (369)
                      +||++||+++||+++|++|++|+++|||+||+ +++|+||++++.+          ...++++.++.+++++++.++++.
T Consensus         2 ~LD~~R~~~~la~~lgv~~~~V~~~ViG~Hg~-~~vp~~s~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~   80 (165)
T d1t2da2           2 VLDTSRLKYYISQKLNVCPRDVNAHIVGAHGN-KMVLLKRYITVGGIPLQEFINNKLISDAELEAIFDRTVNTALEIVNL   80 (165)
T ss_dssp             HHHHHHHHHHHHHHHTSCGGGEECCEEBCSST-TCEECGGGCEETTEEHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHCcCHHHeEEEEEcCCCC-CcccceeecccCCcchhhhcccchhhhhhhhhhhhhhhhhhHHHhhh
Confidence            69999999999999999999999999999998 9999999987642          245667788999999999999884


Q ss_pred             hccCCchhhHHHHHHHHHHHHHHhccCCCCceeEE-EeecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHH
Q 017551          237 KAGAGSATLSMAYAAVKFADACLRGLRGDAGVVEC-AFVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCL  314 (369)
Q Consensus       237 k~g~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~-~~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~  314 (369)
                         +|++.|++|.++++++++++.+.++   ++++ ++++|+| .+++|||+||++|++|+++++++ +|+++|+++|++
T Consensus        81 ---~~~~~~a~a~a~~~~~~~i~~~~~~---~~~~~v~~~g~yg~~~v~~s~Pv~lg~~Gv~~i~~l-~L~~~E~~~L~~  153 (165)
T d1t2da2          81 ---HASPYVAPAAAIIEMAESYLKDLKK---VLICSTLLEGQYGHSDIFGGTPVVLGANGVEQVIEL-QLNSEEKAKFDE  153 (165)
T ss_dssp             ---TSSCCHHHHHHHHHHHHHHHTTCCE---EEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHH
T ss_pred             ---ccceeechhHHHHHHHHHHhhcccc---ceeeeeccccccccCCeeEeeeEEEcCCceEEEeCC-CCCHHHHHHHHH
Confidence               5889999999999999999998763   5555 5889999 77999999999999999999996 899999999999


Q ss_pred             HHHHHHHH
Q 017551          315 LHLCFQDW  322 (369)
Q Consensus       315 ~~~~i~~~  322 (369)
                      ++..++++
T Consensus       154 s~~~lk~~  161 (165)
T d1t2da2         154 AIAETKRM  161 (165)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99655433

>d1o6za2 d.162.1.1 (A:163-330) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=99.95  E-value=5.2e-28  Score=209.12  Aligned_cols=154  Identities=24%  Similarity=0.369  Sum_probs=133.6

Q ss_pred             EEechhcHHHHHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCC---CCCHHHHHHHHhhhccchhhhhhhhcc
Q 017551          163 LGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC---SFTQEETEYLTNRIQNGGTEVVEAKAG  239 (369)
Q Consensus       163 iG~t~Ld~~R~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~---~~~~~~~~~l~~~v~~~~~ev~~~k~g  239 (369)
                      || |+||++||+++||+++|++|++|+++|||+||+ +++|+||++.+.+   ....+++..+.++++..+.++++   +
T Consensus         1 ~G-t~LD~~R~~~~lA~~l~v~~~~V~~~ViG~Hg~-~~v~~~s~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~   75 (161)
T d1o6za2           1 FG-GRLDSARFRYVLSEEFDAPVQNVEGTILGEHGD-AQVPVFSKVSVDGTDPEFSGDEKEQLLGDLQESAMDVIE---R   75 (161)
T ss_dssp             CC-HHHHHHHHHHHHHHHHTCCGGGEECCEEECSST-TEEECGGGCEETTBCCCCCHHHHHHHHHHHHHHHHHHHT---T
T ss_pred             CC-chHHHHHHHHHHHHHHCcCHHHeEEEEEeCCCC-ceeeehhhhcccccccccchHHHHHHHHHhhhhHHHHHH---h
Confidence            46 899999999999999999999999999999999 9999999998743   35567778888889999998877   4


Q ss_pred             CCchhhHHHHHHHHHHHHHHhccCCCCceeEE-EeecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHH
Q 017551          240 AGSATLSMAYAAVKFADACLRGLRGDAGVVEC-AFVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHL  317 (369)
Q Consensus       240 ~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~-~~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~  317 (369)
                      +|++.+++|.++++++.+++.+.+.   ++++ .++.++| +++++||+||++|++|+++++++ +|+++|+++|++++.
T Consensus        76 ~~~s~~~~a~a~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~S~Pv~ig~~Gv~~v~~l-~l~~~E~~~L~~s~~  151 (161)
T d1o6za2          76 KGATEWGPARGVAHMVEAILHDTGE---VLPASVKLEGEFGHEDTAFGVPVSLGSNGVEEIVEW-DLDDYEQDLMADAAE  151 (161)
T ss_dssp             TSSCCHHHHHHHHHHHHHHHTTCCC---EEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHH
T ss_pred             hhhhhhHHHHhhHhhhHhhhhcccc---ceeecccccccccccCceeeeeeEEcCCCEEEEeCC-CCCHHHHHHHHHHHH
Confidence            5789999999999999999987653   4445 4778887 77999999999999999999996 999999999999997


Q ss_pred             HHHHHHHh
Q 017551          318 CFQDWLGE  325 (369)
Q Consensus       318 ~i~~~l~~  325 (369)
                      .+++.+++
T Consensus       152 ~L~~~~~~  159 (161)
T d1o6za2         152 KLSDQYDK  159 (161)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            66666654

>d1ldma2 d.162.1.1 (A:161-329) Lactate dehydrogenase {Dogfish (Squalus acanthias) [TaxId: 7797]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Dogfish (Squalus acanthias) [TaxId: 7797]

Probab=99.95  E-value=3.6e-28  Score=212.17  Aligned_cols=155  Identities=16%  Similarity=0.237  Sum_probs=127.1

Q ss_pred             chhcHHHHHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCCC---------CCHHHHHHHHhhhccchhhhhhh
Q 017551          166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCS---------FTQEETEYLTNRIQNGGTEVVEA  236 (369)
Q Consensus       166 t~Ld~~R~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~~---------~~~~~~~~l~~~v~~~~~ev~~~  236 (369)
                      |+||++||+++||++||++|++|+++||||||+ +++|+||++.+.+.         ...+.+.++..+.+.++.++...
T Consensus         3 T~LDs~R~~~~lA~~l~v~~~~V~~~ViG~Hg~-~~v~~~s~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (169)
T d1ldma2           3 CNLDSARFRYLMGERLGVHSCSCHGWVIGEHGD-SVPSVWSGMNVASIKLHPLDGTNKDKQDWKKLHKDVVDSAYEVIKL   81 (169)
T ss_dssp             THHHHHHHHHHHHHHHTSCGGGCBCCBCBCSST-TCCBCGGGCEETTEESHHHHSSTTTTTTTTHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHCcCHHHeEEEEEcCCCc-cchhhhhhcccCCcchHHhhcccchhhhcceeEEEecCceEEEecc
Confidence            789999999999999999999999999999999 89999999987431         11222334555566666666664


Q ss_pred             hccCCchhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC--CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHH
Q 017551          237 KAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFC  313 (369)
Q Consensus       237 k~g~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~  313 (369)
                         +|++.+++|.++++++.+++++.+   .+++++ +++|+|  ++++|||+||++|++|+++++++ +|+++|+++|+
T Consensus        82 ---~~s~~~a~a~~~~~~~~~~~~~~~---~~~~~~~~~~g~ygi~~~i~~s~Pv~lg~~Gv~~v~~l-~L~~~E~~~l~  154 (169)
T d1ldma2          82 ---KGYTSWAIGLSVADLAETIMKNLC---RVHPVSTMVKDFYGIKDNVFLSLPCVLNDHGISNIVKM-KLKPNEEQQLQ  154 (169)
T ss_dssp             ---HSSCCHHHHHHHHHHHHHHHTTCC---EEEEEEEECTTSTTCCSCCEEEEEEEEETTEEEEECCC-CCCHHHHHHHH
T ss_pred             ---ccchhhHHHHHHhhhhheecCCCC---ceeeeeeecccccCCcCCceEEeeEEEcCCcEEEEecC-CCCHHHHHHHH
Confidence               478999999999999999998765   366665 779998  57899999999999999999996 89999999999


Q ss_pred             HHHHHHHHHHHhhhhhccc
Q 017551          314 LLHLCFQDWLGESEERVSW  332 (369)
Q Consensus       314 ~~~~~i~~~l~~~~~~~~~  332 (369)
                      +++    +.|++..++++|
T Consensus       155 ~s~----~~l~~~~k~lkf  169 (169)
T d1ldma2         155 KSA----TTLWDIQKDLKF  169 (169)
T ss_dssp             HHH----HHHHHHHHTCCC
T ss_pred             HHH----HHHHHHHHhcCC
Confidence            999    455566666554

>d1hyea2 d.162.1.1 (A:146-313) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.95  E-value=2.9e-28  Score=212.77  Aligned_cols=153  Identities=20%  Similarity=0.339  Sum_probs=124.7

Q ss_pred             chhcHHHHHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCCC----C---CHHHHHHHHhhhccchhhhhhhhc
Q 017551          166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCS----F---TQEETEYLTNRIQNGGTEVVEAKA  238 (369)
Q Consensus       166 t~Ld~~R~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~~----~---~~~~~~~l~~~v~~~~~ev~~~k~  238 (369)
                      |+||++||+++||++||++|++|+++|||+||+ +++|+||++++.+.    +   ....++++.+++++++.+++..  
T Consensus         3 T~LDs~R~~~~lA~~l~v~~~~V~~~ViG~Hg~-~~vp~~s~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--   79 (168)
T d1hyea2           3 THLDSLRFKVAIAKFFGVHIDEVRTRIIGEHGD-SMVPLLSATSIGGIPIQKFERFKELPIDEIIEDVKTKGEQIIRL--   79 (168)
T ss_dssp             THHHHHHHHHHHHHHHTCCGGGEECCEEECSST-TEEECGGGCEETTEEGGGCGGGGGCCHHHHHHHHHHHTTSCCC---
T ss_pred             chHHHHHHHHHHHHHHCcCHHHeEEEEEcCCCC-ccccchhheeECCEecccccccchhhhhhHHHHHhhhHHHHHHh--
Confidence            789999999999999999999999999999999 99999999987531    1   1123467778888888888774  


Q ss_pred             cCCchhhHHHHHHHHHHHHHHhccCCCCceeEE-EeecCCC--CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHH
Q 017551          239 GAGSATLSMAYAAVKFADACLRGLRGDAGVVEC-AFVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLL  315 (369)
Q Consensus       239 g~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~-~~~~g~~--~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~  315 (369)
                       +|++.++.|.+++.++++++++.+.   ++++ +++.++|  ++++|||+||++|++|+++++++ +|+++|+++|+++
T Consensus        80 -k~~~~~~~a~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~v~~s~Pv~lg~~Gv~~i~~l-~Ls~~E~~~l~~S  154 (168)
T d1hyea2          80 -KGGSEFGPAAAILNVVRCIVNNEKR---LLTLSAYVDGEFDGIRDVCIGVPVKIGRDGIEEVVSI-ELDKDEIIAFRKS  154 (168)
T ss_dssp             ------CCHHHHHHHHHHHHHTTCCE---EEEEEEEEESSSSSCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHH
T ss_pred             -ccCccccchhhhhHHHHhhhccCCC---eEEEEEEEecccCCcCCEEEeeceEEcCCcEEEEecC-CCCHHHHHHHHHH
Confidence             4788899999999999999987653   4444 5777776  78999999999999999999996 9999999999999


Q ss_pred             HHHHHHHHHhh
Q 017551          316 HLCFQDWLGES  326 (369)
Q Consensus       316 ~~~i~~~l~~~  326 (369)
                      +..+++.+++.
T Consensus       155 a~~lk~~~~~~  165 (168)
T d1hyea2         155 AEIIKKYCEEV  165 (168)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            97776666554

>d1hyha2 d.162.1.1 (A:167-329) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=99.95  E-value=1.5e-27  Score=207.32  Aligned_cols=153  Identities=21%  Similarity=0.249  Sum_probs=129.2

Q ss_pred             chhcHHHHHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCCC-----C--CHHHHHHHHhhhccchhhhhhhhc
Q 017551          166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCS-----F--TQEETEYLTNRIQNGGTEVVEAKA  238 (369)
Q Consensus       166 t~Ld~~R~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~~-----~--~~~~~~~l~~~v~~~~~ev~~~k~  238 (369)
                      |.||++||+++||+++|++|++|+++|||+||+ +++|+||++++.+.     .  .+..++++.+++++++.+|++.| 
T Consensus         2 T~LDs~R~~~~lA~~l~v~~~~V~~~ViG~Hg~-~~vp~~s~~~v~g~~~~~~~~~~~~~~~~i~~~v~~~~~~i~~~k-   79 (163)
T d1hyha2           2 TLLDTARMQRAVGEAFDLDPRSVSGYNLGEHGN-SQFVAWSTVRVMGQPIVTLADAGDIDLAAIEEEARKGGFTVLNGK-   79 (163)
T ss_dssp             THHHHHHHHHHHHHHHTCCGGGCBCCEEBCTTT-TCEECTTTCEETTEEGGGC-----CCHHHHHHHHHHHHHHHHHHH-
T ss_pred             CchHHHHHHHHHHHHhCcCHHHeEEEEEcCCCC-cCccceeccccCCchHHHHhccccchHHHHHHHHhhhHHHHHHHH-
Confidence            679999999999999999999999999999999 99999999987531     1  22346789999999999999854 


Q ss_pred             cCCchhhHHHHHHHHHHHHHHhccCCCCceeEEEeecCCCCCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHH
Q 017551          239 GAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLC  318 (369)
Q Consensus       239 g~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~~~~g~~~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~  318 (369)
                        |++.|++|.++.+++.++..+.+   .+++++...+  .+++|||+||++|++|+++++++ +|+++|+++|++++..
T Consensus        80 --g~~~~~~a~~~~~~~~~~~~~~~---~~~~~s~~~~--~~~~~~s~Pv~ig~~Gv~~v~~l-~Ls~~E~~~l~~s~~~  151 (163)
T d1hyha2          80 --GYTSYGVATSAIRIAKAVMADAH---AELVVSNRRD--DMGMYLSYPAIIGRDGVLAETTL-DLTTDEQEKLLQSRDY  151 (163)
T ss_dssp             --SSCCHHHHHHHHHHHHHHHTTCC---EEEEEEEECT--TTCSEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHH
T ss_pred             --HhHHHhHHHHhhHHHHHhcCCcc---ceeeeceecC--CcceEEEeEEEEcCCeEEEEecC-CCCHHHHHHHHHHHHH
Confidence              88999999999999999998765   2554542211  45799999999999999999996 8999999999999988


Q ss_pred             HHHHHHhhhh
Q 017551          319 FQDWLGESEE  328 (369)
Q Consensus       319 i~~~l~~~~~  328 (369)
                      +++.+++..+
T Consensus       152 l~~~~~~~~~  161 (163)
T d1hyha2         152 IQQRFDEIVD  161 (163)
T ss_dssp             HHHHHHHHHT
T ss_pred             HHHHHHHHHh
Confidence            8777776643

>d1ldna2 d.162.1.1 (A:163-330) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.95  E-value=9.8e-28  Score=209.04  Aligned_cols=152  Identities=20%  Similarity=0.343  Sum_probs=130.0

Q ss_pred             chhcHHHHHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCCC-----------CCHHHHHHHHhhhccchhhhh
Q 017551          166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCS-----------FTQEETEYLTNRIQNGGTEVV  234 (369)
Q Consensus       166 t~Ld~~R~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~~-----------~~~~~~~~l~~~v~~~~~ev~  234 (369)
                      |+||++||+.+||++||++|++|+++|||+||+ +++|+||++++.+.           ...+.++++.++++..+.++.
T Consensus         1 T~LDs~R~~~~lA~~l~v~~~~V~~~ViG~Hg~-~~vp~~s~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~v~   79 (168)
T d1ldna2           1 TILDTARFRFLLGEYFSVAPQNVHAYIIGEHGD-TELPVWSQAYIGVMPIRKLVESKGEEAQKDLERIFVNVRDAAYQII   79 (168)
T ss_dssp             THHHHHHHHHHHHHHHTSCGGGEEEEEEBCSST-TCEEEEEEEEETTEESTTTSGGGTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHhCcCHHHeEEEEEcCCCC-ccccchhhcccCCcchhhhhhhhhhhhccchhhhhhhhhhhHHHHH
Confidence            689999999999999999999999999999998 99999999987431           112345678888888888888


Q ss_pred             hhhccCCchhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHH
Q 017551          235 EAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLF  312 (369)
Q Consensus       235 ~~k~g~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L  312 (369)
                      ..+   |++.+++|.++.+++.+++.+.+   .+++++ +++++| ++++|||+||++|++|+++++++ +|+++|+++|
T Consensus        80 ~~~---~~s~~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~~~yg~~~v~~s~Pv~lg~~Gv~~v~~l-~Ls~~E~~~L  152 (168)
T d1ldna2          80 EKK---GATYYGIAMGLARVTRAILHNEN---AILTVSAYLDGLYGERDVYIGVPAVINRNGIREVIEI-ELNDDEKNRF  152 (168)
T ss_dssp             HHH---SCCCHHHHHHHHHHHHHHHTTCC---EEEEEEEEEESTTSCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHH
T ss_pred             Hhh---ccccchHHHHHhhHHHhhhcccc---eeeeeeeeeccccCCCCeeecceEEEcCCeEEEEeCC-CCCHHHHHHH
Confidence            754   78999999999999999998755   366664 678888 77999999999999999999996 9999999999


Q ss_pred             HHHHHHHHHHHHh
Q 017551          313 CLLHLCFQDWLGE  325 (369)
Q Consensus       313 ~~~~~~i~~~l~~  325 (369)
                      ++++..+++.+++
T Consensus       153 ~~s~~~lk~~i~~  165 (168)
T d1ldna2         153 HHSAATLKSVLAR  165 (168)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999777666654

>d2ldxa2 d.162.1.1 (A:160-331) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.94  E-value=5.2e-27  Score=205.04  Aligned_cols=152  Identities=21%  Similarity=0.322  Sum_probs=126.2

Q ss_pred             chhcHHHHHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCCC------------CCHHHHHHHHhhhccchhhh
Q 017551          166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCS------------FTQEETEYLTNRIQNGGTEV  233 (369)
Q Consensus       166 t~Ld~~R~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~~------------~~~~~~~~l~~~v~~~~~ev  233 (369)
                      |+||++||+++||+++|++|++|+++|||+||+ +++|+||++.+++.            ...+..+.+....+..+.++
T Consensus         3 T~LD~~R~~~~vA~~l~v~~~~V~~~ViG~Hs~-~~ip~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~   81 (172)
T d2ldxa2           3 CNLDSARFRYLIGEKLGVNPTSCHGWVLGEHGD-SSVPIWSGVNVAGVTLKSLNPAIGTDKNKQHWKNVHKQVVEGGYEV   81 (172)
T ss_dssp             THHHHHHHHHHHHHHHTCCTTSSCCCEEECSSS-CEEECGGGCBSSCSSSSBSTTTCSCSSSSSSCHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHhCcCHHHcEEEEEcCCCC-ccccceecceecCcchhhHHHHhhhhhhhhhhhhhhhhhccceeeh
Confidence            689999999999999999999999999999999 89999999987421            11123356777777777777


Q ss_pred             hhhhccCCchhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC--CCccEEEEEEEEcCCCeEEEccCCCCCHHHHH
Q 017551          234 VEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYESG  310 (369)
Q Consensus       234 ~~~k~g~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~  310 (369)
                      ...   ++++.+++|.++++++.+++.+.+   .+++++ +++|+|  ++++|||+||++|++|+++++++ +|+++|++
T Consensus        82 ~~~---k~~s~~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~g~ygi~~~i~~s~Pv~ig~~Gv~~v~~l-~L~~~E~~  154 (172)
T d2ldxa2          82 LDM---KGYTSWAIGLSVTDLARSILKNLK---RVHPVTTLVKGFHGIKEEVFLSIPCVLGESGITDFVKV-NMTAEEEG  154 (172)
T ss_dssp             HHH---HSSCCHHHHHHHHHHHHHHHTTCC---EEEEEEEECTTSTTCCSSCEEEEEEEEETTEEEEEECC-CCCHHHHH
T ss_pred             hhc---ccchhHHHHHHHhHHHHhhcCCCc---cceeeeeecccccCCcCCeEEEEEEEEcCCCEEEEecC-CCCHHHHH
Confidence            774   478999999999999999998754   366664 678998  67999999999999999999996 99999999


Q ss_pred             HHHHHHHHHHHHHHhhhhh
Q 017551          311 LFCLLHLCFQDWLGESEER  329 (369)
Q Consensus       311 ~L~~~~~~i~~~l~~~~~~  329 (369)
                      +|++++.    .|++..++
T Consensus       155 ~l~~s~~----~lk~~~k~  169 (172)
T d2ldxa2         155 LLKKSAD----TLWNMQKN  169 (172)
T ss_dssp             HHHHHHH----HHHHHTSC
T ss_pred             HHHHHHH----HHHHHHHh
Confidence            9999994    44555443

>d1llca2 d.162.1.1 (A:165-334) Lactate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=99.94  E-value=2.1e-28  Score=214.60  Aligned_cols=148  Identities=19%  Similarity=0.318  Sum_probs=127.2

Q ss_pred             chhcHHHHHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCCC-----------CCHHHHHHHHhhhccchhhhh
Q 017551          166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCS-----------FTQEETEYLTNRIQNGGTEVV  234 (369)
Q Consensus       166 t~Ld~~R~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~~-----------~~~~~~~~l~~~v~~~~~ev~  234 (369)
                      |+||++||+++||+++|+++++|+++||||||+ +++|+||++++.+.           +..+.++++.+++++++.+++
T Consensus         1 T~LDs~R~~~~lA~~l~v~~~~V~~~ViG~Hg~-~~vp~~s~~~i~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~   79 (172)
T d1llca2           1 TSLDTARFRQSIAEMVNVDARSVHAYIMGEHGD-TEFPVWSHANIGGVTIAEWVKAHPEIKEDKLVKMFEDVRDAAYEII   79 (172)
T ss_dssp             THHHHHHHHHHHHHHSCCCTTSCEEEEEBSSSS-SCEEEEEEEESTTCCSSSSSSCSCSSSSSSSSTTTTTTGGGTTTTS
T ss_pred             CchHHHHHHHHHHHHhCcCHHHeEEEEEcCCCC-cceeeeeccccCCccHHHHHhhhhccchhHHHHHHHhhcchHHHHH
Confidence            689999999999999999999999999999999 99999999876431           122234677788888999998


Q ss_pred             hhhccCCchhhHHHHHHHHHHHHHHhccCCCCceeEE-EeecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHH
Q 017551          235 EAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVEC-AFVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLF  312 (369)
Q Consensus       235 ~~k~g~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~-~~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L  312 (369)
                      +   ++|++.|++|.++++++.+++.+.+.   ++++ ++++|+| .+++|||+||++|++|+++++++ +|+++|+++|
T Consensus        80 ~---~kg~~~~a~a~~~~~~~~~~~~~~~~---~~~~~~~~~g~ygi~~~~~s~P~~lg~~Gv~~i~~l-~L~~~E~~~l  152 (172)
T d1llca2          80 K---LKGATFYGIATALARISKAILNDENA---VLPLSVYMDGQYGINDLYIGTPAVINRNGIQNILEI-PLTDHEEESM  152 (172)
T ss_dssp             S---SSSCTTHHHHHHHHHHHHHHHHTCCC---CEECCCCCSSSSSCCSSCCBCEEEEETTEEEEECCC-CCTTHHHHHH
T ss_pred             H---hhhhhhhhhHHHHHHHHHHHhcCCCC---ccceeeeecCccCcccceEEEEEEEcCCceEEEecC-CCCHHHHHHH
Confidence            7   56899999999999999999998653   5555 4889999 67899999999999999999996 8999999999


Q ss_pred             HHHHHHHHH
Q 017551          313 CLLHLCFQD  321 (369)
Q Consensus       313 ~~~~~~i~~  321 (369)
                      ++++..|++
T Consensus       153 ~~s~~~lk~  161 (172)
T d1llca2         153 QKSASQLKK  161 (172)
T ss_dssp             HTTTTTTTT
T ss_pred             HHHHHHHHH
Confidence            999954443

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.94  E-value=2.2e-27  Score=207.88  Aligned_cols=139  Identities=19%  Similarity=0.220  Sum_probs=112.2

Q ss_pred             CCEEEEEcCCCccHHHH--HHHHHhCCC--CcEEEEEeCCC--chhHHHHhhccc----CCCeEEEEeCCCChhhhcCCC
Q 017551           20 GFKVAILGAAGGIGQPL--AMLMKINPL--VSVLHLYDVVN--TPGVTADISHMD----TGAVVRGFLGQPQLENALTGM   89 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~l--a~~l~~~~~--~~el~L~D~~~--~~g~~~dL~~~~----~~~~v~~~~~t~dl~~al~~A   89 (369)
                      ++||+|||| |++|.+.  +..++..+.  ..||+|+|+++  .++.++|+.|..    .....+... ++|++++++||
T Consensus         1 k~KI~iIGa-Gs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~-~td~~~al~ga   78 (169)
T d1s6ya1           1 RLKIATIGG-GSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHL-TLDRRRALDGA   78 (169)
T ss_dssp             CEEEEEETT-TCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEE-ESCHHHHHTTC
T ss_pred             CcEEEEECC-ChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeee-cCCchhhcCCC
Confidence            479999999 9887654  445554442  47999999988  568888887743    233444432 56888999999


Q ss_pred             cEEEEcCCCCCCCCCCHHHH--------------------HHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHH
Q 017551           90 DLVIIPAGVPRKPGMTRDDL--------------------FNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE  149 (369)
Q Consensus        90 DiVii~ag~p~k~g~~r~~~--------------------~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae  149 (369)
                      |+||+++|.++++|++|+++                    +.+|++++++++++|+++|||||++++|||+|++|+++  
T Consensus        79 DvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pda~~i~vtNPvdv~t~~~--  156 (169)
T d1s6ya1          79 DFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPAGMVTEAV--  156 (169)
T ss_dssp             SEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHH--
T ss_pred             CEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCCeEEEEeCChHHHHHHHH--
Confidence            99999999999888777665                    57999999999999999999999999999999998654  


Q ss_pred             HHHHhCCCCCCcEEEec
Q 017551          150 VFKKAGTYDPKKLLGVT  166 (369)
Q Consensus       150 ~~~~~~~~~~~kviG~t  166 (369)
                        ++.  +|++||||+|
T Consensus       157 --~k~--~p~~kviGlC  169 (169)
T d1s6ya1         157 --LRY--TKQEKVVGLC  169 (169)
T ss_dssp             --HHH--CCCCCEEECC
T ss_pred             --HHH--CCCCCEEeeC
Confidence              666  5889999998

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=99.93  E-value=1.9e-26  Score=201.31  Aligned_cols=139  Identities=19%  Similarity=0.208  Sum_probs=110.4

Q ss_pred             CCCCEEEEEcCCCccHHHHHH--HHHhCC--CCcEEEEEeCCC--chhHHHHhhccc--CCCeEEEEeCCCChhhhcCCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAM--LMKINP--LVSVLHLYDVVN--TPGVTADISHMD--TGAVVRGFLGQPQLENALTGM   89 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~--~l~~~~--~~~el~L~D~~~--~~g~~~dL~~~~--~~~~v~~~~~t~dl~~al~~A   89 (369)
                      ++..||+|||| |++|.+.+.  .+....  ..+||+|+|+++  +++.+.++.+..  .....+... ++|+++|++||
T Consensus         1 ~k~~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~eal~~A   78 (167)
T d1u8xx1           1 KKSFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAA-TTDPEEAFTDV   78 (167)
T ss_dssp             CCCEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEE-ESCHHHHHSSC
T ss_pred             CCCceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEe-cCChhhccCCC
Confidence            46789999999 999887553  333333  257999999998  566666666643  223333322 46888999999


Q ss_pred             cEEEEcCCCCCCCCCCHHHHH--------------------HHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHH
Q 017551           90 DLVIIPAGVPRKPGMTRDDLF--------------------NINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE  149 (369)
Q Consensus        90 DiVii~ag~p~k~g~~r~~~~--------------------~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae  149 (369)
                      |+||+++|.++++|++|++++                    .+|+++++++++.|+++||+||++++|||+|++|+++  
T Consensus        79 D~Vvitag~~~~~g~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~~P~A~li~~TNPvdv~t~~~--  156 (167)
T d1u8xx1          79 DFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPAAIVAEAT--  156 (167)
T ss_dssp             SEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCHHHHHHHH--
T ss_pred             CEEEECCCcCCCCceeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhhCCCeEEEEeCCHHHHHHHHH--
Confidence            999999999999999998875                    4679999999999999999999999999999998654  


Q ss_pred             HHHHhCCCCCCcEEE
Q 017551          150 VFKKAGTYDPKKLLG  164 (369)
Q Consensus       150 ~~~~~~~~~~~kviG  164 (369)
                        ++.  +|++|||.
T Consensus       157 --~k~--~P~~rVI~  167 (167)
T d1u8xx1         157 --RRL--RPNSKILN  167 (167)
T ss_dssp             --HHH--STTCCEEE
T ss_pred             --HHH--CCcccccC
Confidence              666  69999984

>d1y7ta2 d.162.1.1 (A:154-332) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.93  E-value=1.5e-25  Score=196.38  Aligned_cols=157  Identities=19%  Similarity=0.176  Sum_probs=123.2

Q ss_pred             echhcHHHHHHHHHHHhCCCCCCCcee-EEeecCCCccccccccCCCCCC----C-CHH-HHHHHHhhhccchhhhhhhh
Q 017551          165 VTMLDVVRANTFVAEVLGLDPRDVDVP-VVGGHAGVTILPLLSQVKPPCS----F-TQE-ETEYLTNRIQNGGTEVVEAK  237 (369)
Q Consensus       165 ~t~Ld~~R~~~~la~~lgv~~~~V~~~-viG~hg~~~~vp~~S~~~~~~~----~-~~~-~~~~l~~~v~~~~~ev~~~k  237 (369)
                      +|.||++|||++||+++|++|++|+++ |||+||+ +++|+||++++.+.    + .+. ...+..++...++.+++.. 
T Consensus         1 ~T~LDs~R~r~~lA~~l~v~~~~V~~~iI~GeHG~-s~vp~~S~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   78 (173)
T d1y7ta2           1 MTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSS-TMFPDLFHAEVDGRPALELVDMEWYEKVFIPTVAQRGAAIIQA-   78 (173)
T ss_dssp             CCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST-TCEEECSSCEETTEEGGGTSCHHHHHHTHHHHHHHHHHHHHHH-
T ss_pred             CChhHHHHHHHHHHHHHCcCHHHcEEEEEEEecCc-cEEeeeeeeeEcCccHHHhcccccccchhhhhhhhhHHHHHHH-
Confidence            488999999999999999999999875 6799999 99999999998541    2 222 2233444445555566554 


Q ss_pred             ccCCchhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC--CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHH
Q 017551          238 AGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCL  314 (369)
Q Consensus       238 ~g~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~  314 (369)
                       .+++++|++|.++++++.+++.+.++. .+++++ +++|+|  +++.++|+||+++++|++.+.++ +|+++|+++|++
T Consensus        79 -~~~~s~~~~a~a~~~~~~~~~~~~~~~-~~~~~~v~~~g~YGi~~~~~~s~Pvi~~~gg~~~v~~l-~L~~~E~~~l~~  155 (173)
T d1y7ta2          79 -RGASSAASAANAAIEHIRDWALGTPEG-DWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEGL-EINEFARKRMEI  155 (173)
T ss_dssp             -HSSCCHHHHHHHHHHHHHHHHTBCCTT-CCEEEEEECSSGGGCCTTSEEEEEEEEETTEEEECCCC-CCCHHHHHHHHH
T ss_pred             -hccCchhhHHHHHHHHHHHHhcccCCC-CceeeEEEeccccCCccceeEeeeEEEeCCeEEEecCC-CCCHHHHHHHHH
Confidence             357889999999999999999987644 477775 789998  78999999999887777766665 899999999999


Q ss_pred             HHHHHHHHHHhh
Q 017551          315 LHLCFQDWLGES  326 (369)
Q Consensus       315 ~~~~i~~~l~~~  326 (369)
                      ++..+++.++..
T Consensus       156 s~~~L~~~~e~v  167 (173)
T d1y7ta2         156 TAQELLDEMEQV  167 (173)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            996555555433

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.92  E-value=1e-26  Score=202.24  Aligned_cols=137  Identities=16%  Similarity=0.233  Sum_probs=106.4

Q ss_pred             CEEEEEcCCCccHHHHHHHHHh--C--CCCcEEEEEeCCC-chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551           21 FKVAILGAAGGIGQPLAMLMKI--N--PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP   95 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~--~--~~~~el~L~D~~~-~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~   95 (369)
                      |||+|||| |++|.+.++....  .  ..++||+|+|+++ ..+.+.|+.|........... +++.+++++|||+||++
T Consensus         1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~-t~~~~~~l~~aDvVVit   78 (162)
T d1up7a1           1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLI-SDTFEGAVVDAKYVIFQ   78 (162)
T ss_dssp             CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEE-CSSHHHHHTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEE-ecCcccccCCCCEEEEe
Confidence            79999999 9999998864332  2  2468999999998 344567777765333333333 45678999999999999


Q ss_pred             CCCCCCCCCCHHHHH--------------------HHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhC
Q 017551           96 AGVPRKPGMTRDDLF--------------------NINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAG  155 (369)
Q Consensus        96 ag~p~k~g~~r~~~~--------------------~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~  155 (369)
                      +|.|+++|++|++++                    .++++++.++.+ +.++||+||++++|||+|++|++    +++. 
T Consensus        79 a~~~~~~~~~r~~~i~~~~~i~~~~~~g~~g~~~~~r~~~~~~~i~~-~~~~~p~a~~i~vtNPvdiit~~----~~~~-  152 (162)
T d1up7a1          79 FRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVD-TVRKTSNATIVNFTNPSGHITEF----VRNY-  152 (162)
T ss_dssp             CCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHH-HHHHTTCCEEEECSSSHHHHHHH----HHHT-
T ss_pred             cccCCCCCcchHhhhhhhcCeeeeeccCcchhhhhhhhhHHHHHHhh-hhccCCCeEEEEeCCHHHHHHHH----HHHh-
Confidence            999998888776554                    456777777765 77889999999999999999864    4776 


Q ss_pred             CCCCCcEEEec
Q 017551          156 TYDPKKLLGVT  166 (369)
Q Consensus       156 ~~~~~kviG~t  166 (369)
                       +|++|+||+|
T Consensus       153 -~p~~rviGlC  162 (162)
T d1up7a1         153 -LEYEKFIGLC  162 (162)
T ss_dssp             -TCCSSEEECC
T ss_pred             -CCCCCEEeeC
Confidence             5789999998

>d1b8pa2 d.162.1.1 (A:159-329) Malate dehydrogenase {Aquaspirillum arcticum [TaxId: 87645]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Aquaspirillum arcticum [TaxId: 87645]

Probab=99.91  E-value=1.6e-24  Score=189.25  Aligned_cols=151  Identities=16%  Similarity=0.158  Sum_probs=111.4

Q ss_pred             hhcHHHHHHHHHHHhCCCCCCCce-eEEeecCCCccccccccCCCCCC-----CCHH--HHHHHHhhhccchhhhhhhhc
Q 017551          167 MLDVVRANTFVAEVLGLDPRDVDV-PVVGGHAGVTILPLLSQVKPPCS-----FTQE--ETEYLTNRIQNGGTEVVEAKA  238 (369)
Q Consensus       167 ~Ld~~R~~~~la~~lgv~~~~V~~-~viG~hg~~~~vp~~S~~~~~~~-----~~~~--~~~~l~~~v~~~~~ev~~~k~  238 (369)
                      .||++||+++||+++|++|++|+. +|||+||+ +++|+||++++.+.     ..+.  ..+++.+.++.++.++...+ 
T Consensus         2 ~LD~~R~r~~lA~kl~v~~~~V~~~iI~GehG~-s~vp~~S~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   79 (171)
T d1b8pa2           2 RLDHNRALSQIAAKTGKPVSSIEKLFVWGNHSP-TMYADYRYAQIDGASVKDMINDDAWNRDTFLPTVGKRGAAIIDAR-   79 (171)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGEESCEEEBCSST-TCEEECSSCEETTEEHHHHHCCHHHHHHTHHHHHHTHHHHHHHHH-
T ss_pred             cchHHHHHHHHHHHHCcCHHHeEEEEEEEcCCC-cEEeeeecceeecccchhhhhhhcchhhhHHHHHHHHHHHHHHHH-
Confidence            389999999999999999999976 77799999 99999999998542     1111  22345555566666666654 


Q ss_pred             cCCchhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC--CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHH
Q 017551          239 GAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLL  315 (369)
Q Consensus       239 g~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~  315 (369)
                      +++++.++ +.+++..+..++.+.+++  +++++ +++|+|  ++++|||+||++|++|++.+.++ +|+++|+++|+++
T Consensus        80 ~~~~~~~~-~~a~~~~~~~~i~~~~~~--~~~~s~~~~g~yg~~~gi~fS~Pv~ig~~gve~v~~l-~L~~~e~~~l~~s  155 (171)
T d1b8pa2          80 GVSSAASA-ANAAIDHIHDWVLGTAGK--WTTMGIPSDGSYGIPEGVIFGFPVTTENGEYKIVQGL-SIDAFSQERINVT  155 (171)
T ss_dssp             SSCCHHHH-HHHHHHHHHHHHHCCTTC--CEEEEEECCSGGGCCTTCEEEEEEEEETTEEEECCCC-CCCHHHHHHHHHH
T ss_pred             hhhhhhhh-hHHHHHHHHHHHhCCCcc--ceeEEEEeccccccccceEEEEEEEEeCCeEEEEeCC-CCCHHHHHHHHHH
Confidence            44444444 444555554555444432  56664 779998  78999999999999999999997 8999999999999


Q ss_pred             HHHHHHHH
Q 017551          316 HLCFQDWL  323 (369)
Q Consensus       316 ~~~i~~~l  323 (369)
                      +..++++.
T Consensus       156 ~~~L~~e~  163 (171)
T d1b8pa2         156 LNELLEEQ  163 (171)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            95544443

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=99.90  E-value=1.5e-24  Score=189.91  Aligned_cols=137  Identities=19%  Similarity=0.170  Sum_probs=107.1

Q ss_pred             CCCEEEEEcCCCccHHHHHH--HHHhC-CC-CcEEEEEeCCC--chhHHHHhhccc--CCCeEEEEeCCCChhhhcCCCc
Q 017551           19 AGFKVAILGAAGGIGQPLAM--LMKIN-PL-VSVLHLYDVVN--TPGVTADISHMD--TGAVVRGFLGQPQLENALTGMD   90 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~--~l~~~-~~-~~el~L~D~~~--~~g~~~dL~~~~--~~~~v~~~~~t~dl~~al~~AD   90 (369)
                      ++|||+|||| |++|++++.  .++.. .+ ..||+|+|+++  +++.+.|+.|..  .....+... ++|+++|++|||
T Consensus         1 p~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~-~td~~eaL~dad   78 (171)
T d1obba1           1 PSVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEK-TMNLDDVIIDAD   78 (171)
T ss_dssp             CCCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEE-ESCHHHHHTTCS
T ss_pred             CCcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEE-eCChhhcccCCC
Confidence            3689999999 999998654  34433 32 46999999998  577788888754  233444332 578999999999


Q ss_pred             EEEEcCC------------------CCCCCCCCHHHH--------HHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChh
Q 017551           91 LVIIPAG------------------VPRKPGMTRDDL--------FNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTV  144 (369)
Q Consensus        91 iVii~ag------------------~p~k~g~~r~~~--------~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t  144 (369)
                      +||++++                  .+++++++|.++        +.+|+++++++++.|+++||+||++++|||+|++|
T Consensus        79 ~Vv~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~p~a~~i~~TNPvdv~t  158 (171)
T d1obba1          79 FVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPIFEGT  158 (171)
T ss_dssp             EEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECSSCHHHHH
T ss_pred             eEeeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHCcCeEEEEECChHHHHH
Confidence            9998755                  356667776554        57899999999999999999999999999999998


Q ss_pred             HHHHHHHHHhCCCCCCcEEE
Q 017551          145 PIAAEVFKKAGTYDPKKLLG  164 (369)
Q Consensus       145 ~i~ae~~~~~~~~~~~kviG  164 (369)
                      +++    ++++++   |+||
T Consensus       159 ~~~----~k~~~~---k~iG  171 (171)
T d1obba1         159 TLV----TRTVPI---KAVG  171 (171)
T ss_dssp             HHH----HHHSCS---EEEE
T ss_pred             HHH----HHhcCC---CccC
Confidence            654    777654   8887

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=1.9e-09  Score=94.48  Aligned_cols=120  Identities=16%  Similarity=0.199  Sum_probs=84.3

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-c--hhH--H-HHhhc---cc--------------CCCeEEEEe
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-T--PGV--T-ADISH---MD--------------TGAVVRGFL   77 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-~--~g~--~-~dL~~---~~--------------~~~~v~~~~   77 (369)
                      +||+|||| |.||+.+|..++..|+  +++|+|+++ .  .+.  . .-|..   ..              ...++..  
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~--~V~l~D~~~~~l~~a~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~--   79 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGH--TVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIAT--   79 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEE--
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCC--cEEEEECChHHHHHHHhhHHHHHHHHHHhhhhccchhhHHHHHHHHhhccc--
Confidence            49999999 9999999999999999  999999987 1  111  0 00110   00              0123443  


Q ss_pred             CCCChhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCC
Q 017551           78 GQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY  157 (369)
Q Consensus        78 ~t~dl~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~  157 (369)
                       ++|+.+++++||+|+.+.              .+|+++.+++...+++++|.. .|++||-..+...-++    ... -
T Consensus        80 -~~d~~~a~~~ad~ViEav--------------~E~l~~K~~v~~~l~~~~~~~-~ilasnTS~l~i~~la----~~~-~  138 (192)
T d1f0ya2          80 -STDAASVVHSTDLVVEAI--------------VENLKVKNELFKRLDKFAAEH-TIFASNTSSLQITSIA----NAT-T  138 (192)
T ss_dssp             -ESCHHHHTTSCSEEEECC--------------CSCHHHHHHHHHHHTTTSCTT-CEEEECCSSSCHHHHH----TTS-S
T ss_pred             -cchhHhhhcccceehhhc--------------ccchhHHHHHHHHHhhhcccC-ceeeccCcccccchhh----hhc-c
Confidence             467889999999999995              568999999999999999655 3458887765432221    222 3


Q ss_pred             CCCcEEEec
Q 017551          158 DPKKLLGVT  166 (369)
Q Consensus       158 ~~~kviG~t  166 (369)
                      .|.|++|+.
T Consensus       139 ~p~r~ig~H  147 (192)
T d1f0ya2         139 RQDRFAGLH  147 (192)
T ss_dssp             CGGGEEEEE
T ss_pred             CHhHEEeec
Confidence            467787774

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=98.81  E-value=3.3e-09  Score=92.27  Aligned_cols=120  Identities=18%  Similarity=0.228  Sum_probs=82.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-c--hh--HHHH-hhc---cc---------CCCeEEEEeCCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-T--PG--VTAD-ISH---MD---------TGAVVRGFLGQPQ   81 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-~--~g--~~~d-L~~---~~---------~~~~v~~~~~t~d   81 (369)
                      -.||+|||| |.||+.+|..++..|+  +|+|||++. .  .+  .+.+ +.+   ..         ...++..   +++
T Consensus         4 I~~vaViGa-G~mG~~iA~~~a~~G~--~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~---~~~   77 (186)
T d1wdka3           4 VKQAAVLGA-GIMGGGIAYQSASKGT--PILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRP---TLS   77 (186)
T ss_dssp             CSSEEEECC-HHHHHHHHHHHHHTTC--CEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEE---ESS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCC--eEEEEECCHHHHhhhhhhhhhhHHhhhcccccchhhhhhhhceeec---ccc
Confidence            458999999 9999999999999998  999999987 1  11  1111 111   00         0123443   234


Q ss_pred             hhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCc
Q 017551           82 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKK  161 (369)
Q Consensus        82 l~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~k  161 (369)
                      + +++.+||+||.+.              .+|+++.+++.+++++++|.. .|++||-..+...-++   ...  -.|.|
T Consensus        78 ~-~~~~~adlViEav--------------~E~l~~K~~lf~~l~~~~~~~-~IiaSnTS~l~i~~la---~~~--~~p~r  136 (186)
T d1wdka3          78 Y-GDFGNVDLVVEAV--------------VENPKVKQAVLAEVENHVRED-AILASNTSTISISLLA---KAL--KRPEN  136 (186)
T ss_dssp             S-TTGGGCSEEEECC--------------CSCHHHHHHHHHHHHTTSCTT-CEEEECCSSSCHHHHG---GGC--SCGGG
T ss_pred             c-ccccccceeeeee--------------cchHHHHHHHHHHHHhhcCCC-eeEEeccccccHHHHH---Hhc--cCchh
Confidence            4 6799999999985              567899999999999999655 2458887766442221   122  23677


Q ss_pred             EEEec
Q 017551          162 LLGVT  166 (369)
Q Consensus       162 viG~t  166 (369)
                      ++|+.
T Consensus       137 ~~g~H  141 (186)
T d1wdka3         137 FVGMH  141 (186)
T ss_dssp             EEEEE
T ss_pred             eEeec
Confidence            77764

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.70  E-value=3.9e-08  Score=86.21  Aligned_cols=130  Identities=15%  Similarity=0.164  Sum_probs=83.5

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHH-----------HH-hhcccCCCeEEEEeCCCChhhhc
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVT-----------AD-ISHMDTGAVVRGFLGQPQLENAL   86 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~-----------~d-L~~~~~~~~v~~~~~t~dl~~al   86 (369)
                      |||+|||+ |++|.++|..|+..++  +|+.||++..  ..+-           .+ |........+..   ++|+.+++
T Consensus         1 MkI~ViGl-G~vGl~~a~~la~~g~--~V~g~D~n~~~i~~ln~g~~p~~e~~~~~~l~~~~~~~~~~~---~~~~~~~i   74 (202)
T d1mv8a2           1 MRISIFGL-GYVGAVCAGCLSARGH--EVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSG---TTDFKKAV   74 (202)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTC--EEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE---ESCHHHHH
T ss_pred             CEEEEECC-CHhHHHHHHHHHhCCC--cEEEEeCCHHHHHHhcccCCcccchhhhhhhhhhhccccccc---CCCHHHHH
Confidence            89999999 9999999999999998  9999999861  1110           01 111111234444   46788999


Q ss_pred             CCCcEEEEcCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe-cCCCCChhHHHHHHHHHhCCCCC
Q 017551           87 TGMDLVIIPAGVPRKPG-MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI-SNPVNSTVPIAAEVFKKAGTYDP  159 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~g-~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~-tNPv~~~t~i~ae~~~~~~~~~~  159 (369)
                      ++||+++++.+.|.... ......+.   .+...+...++...++.++++- |-|.+.+..+...++.+.++...
T Consensus        75 ~~~d~i~i~VpTP~~~~~~~d~~~~~---~~~~~i~~~~~~~~~~~liii~STv~pGtt~~~~~~~l~~~~~~~~  146 (202)
T d1mv8a2          75 LDSDVSFICVGTPSKKNGDLDLGYIE---TVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDCSGKKA  146 (202)
T ss_dssp             HTCSEEEECCCCCBCTTSSBCCHHHH---HHHHHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHHHHSCCB
T ss_pred             hhCCEEEEecCccccccccccchhhh---hhhhhhhheeecccCCcceeeccccCCcchhhhhhhhhhccccccc
Confidence            99999999998886443 22222222   3444555555555577766554 67777776555444555444433

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=98.49  E-value=5.5e-07  Score=76.30  Aligned_cols=101  Identities=18%  Similarity=0.191  Sum_probs=65.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch-hHHHHhhccc--C-CCeEEE--EeCCCChhhhcCCCcEEE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMD--T-GAVVRG--FLGQPQLENALTGMDLVI   93 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~-g~~~dL~~~~--~-~~~v~~--~~~t~dl~~al~~ADiVi   93 (369)
                      ++||+|||| |.+|+.++..|+++|+  +|.+||+++.+ ....+.....  . ......  ...++|+.+++++||+||
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~ii   77 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQ--SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVIL   77 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEE
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEE
Confidence            369999999 9999999999999998  99999998621 1111111110  0 011110  011357889999999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCC
Q 017551           94 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNP  139 (369)
Q Consensus        94 i~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP  139 (369)
                      ++.  |              .....+++++++.+. ++.+|+...|.
T Consensus        78 i~v--~--------------~~~~~~~~~~i~~~l~~~~~iv~~~g~  108 (184)
T d1bg6a2          78 IVV--P--------------AIHHASIAANIASYISEGQLIILNPGA  108 (184)
T ss_dssp             ECS--C--------------GGGHHHHHHHHGGGCCTTCEEEESSCC
T ss_pred             EEE--c--------------hhHHHHHHHHhhhccCCCCEEEEeCCC
Confidence            984  2              112456777777775 56665544443

>d1up7a2 d.162.1.2 (A:163-415) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: AglA-like glucosidase
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.46  E-value=8.1e-07  Score=80.57  Aligned_cols=72  Identities=8%  Similarity=0.047  Sum_probs=58.0

Q ss_pred             CCchhhHHHHHHHHHHHHHHhccCCCCceeEE-EeecCCC---CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHH
Q 017551          240 AGSATLSMAYAAVKFADACLRGLRGDAGVVEC-AFVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLL  315 (369)
Q Consensus       240 ~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~-~~~~g~~---~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~  315 (369)
                      +++..++  ..++++++||.+|.+.   ++.+ +.++|.+   |+|.+++|||+|+++|+.++.. ++|++...++++..
T Consensus       127 ~~~~~~~--e~a~~ii~ai~~~~~~---~~~vNv~N~G~I~~Lp~d~vVEVp~~V~~~Gi~P~~~-g~lP~~~~~Li~~~  200 (253)
T d1up7a2         127 RGGSMYS--TAAAHLIRDLETDEGK---IHIVNTRNNGSIENLPDDYVLEIPCYVRSGRVHTLSQ-GKGDHFALSFIHAV  200 (253)
T ss_dssp             STTTTHH--HHHHHHHHHHHSSSCE---EEEEEEECTTSSTTSCTTCEEEEEEEEETTEEEEBCC-CCCCHHHHHHHHHH
T ss_pred             ccCcchH--HHHHHHHHHHHcCCCc---EEEEeCCCcCcCCCCChhhheEEEEEecCCccccccc-CCCcHHHHHHHHHH
Confidence            3455555  7889999999999774   3434 4688887   8999999999999999999775 79999999988765


Q ss_pred             HH
Q 017551          316 HL  317 (369)
Q Consensus       316 ~~  317 (369)
                      ..
T Consensus       201 ~~  202 (253)
T d1up7a2         201 KM  202 (253)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=98.41  E-value=6.6e-07  Score=75.21  Aligned_cols=90  Identities=17%  Similarity=0.209  Sum_probs=60.3

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch-hHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP   99 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~-g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p   99 (369)
                      |||+|||+ |.+|++++..|..+++  +|+.||++... ..+.++.-    .. ..   .+++ +++++||+||++.  |
T Consensus         1 MkI~iIG~-G~mG~~lA~~l~~~g~--~V~~~d~~~~~~~~a~~~~~----~~-~~---~~~~-~~~~~~DiIilav--p   66 (165)
T d2f1ka2           1 MKIGVVGL-GLIGASLAGDLRRRGH--YLIGVSRQQSTCEKAVERQL----VD-EA---GQDL-SLLQTAKIIFLCT--P   66 (165)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHTTS----CS-EE---ESCG-GGGTTCSEEEECS--C
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCC--EEEEEECCchHHHHHHHhhc----cc-ee---eeec-ccccccccccccC--c
Confidence            79999999 9999999999999998  99999998621 11221111    11 11   1343 7899999999974  3


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 017551          100 RKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  138 (369)
Q Consensus       100 ~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN  138 (369)
                                    ...+.++.+++..+. |+.+++..++
T Consensus        67 --------------~~~~~~vl~~l~~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          67 --------------IQLILPTLEKLIPHLSPTAIVTDVAS   92 (165)
T ss_dssp             --------------HHHHHHHHHHHGGGSCTTCEEEECCS
T ss_pred             --------------Hhhhhhhhhhhhhhcccccceeeccc
Confidence                          233455666666654 6666655543

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.39  E-value=6.5e-07  Score=76.82  Aligned_cols=97  Identities=24%  Similarity=0.250  Sum_probs=66.5

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcc----cC---CCeEEEEeCCCChhhhcCCCcEEE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM----DT---GAVVRGFLGQPQLENALTGMDLVI   93 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~----~~---~~~v~~~~~t~dl~~al~~ADiVi   93 (369)
                      |||+|||| |..|+++|..|..++.  +|.||........+..+...    ..   ....... .++|+.+++++||+||
T Consensus         1 MkI~ViGa-G~~GtalA~~la~~g~--~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~ad~Ii   76 (180)
T d1txga2           1 MIVSILGA-GAMGSALSVPLVDNGN--EVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIF-WPEQLEKCLENAEVVL   76 (180)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCC--EEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEE-CGGGHHHHHTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCC--EEEEEEecccHHHHHHHhhhhhhhhhcchhcccccc-ccccHHHHHhccchhh
Confidence            89999999 9999999999999887  99999874322233333221    11   1122222 3678899999999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           94 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        94 i~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ++.  |              ...++++++++..+-++..+++.|
T Consensus        77 ~av--p--------------s~~~~~~~~~l~~~l~~~~ii~~t  104 (180)
T d1txga2          77 LGV--S--------------TDGVLPVMSRILPYLKDQYIVLIS  104 (180)
T ss_dssp             ECS--C--------------GGGHHHHHHHHTTTCCSCEEEECC
T ss_pred             ccc--c--------------hhhhHHHHHhhccccccceecccc
Confidence            974  3              234567777777777665555543

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=98.34  E-value=8.9e-07  Score=82.47  Aligned_cols=114  Identities=18%  Similarity=0.147  Sum_probs=77.4

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeC-CC---ChhhhcC--CCcEE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QP---QLENALT--GMDLV   92 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~-t~---dl~~al~--~ADiV   92 (369)
                      |||.|+||+|++|+.++..|+.++.  +|+++|...  .......+.+.. ...++.+.+ -+   .+.++++  ++|+|
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~--~V~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~l~~~~~~~~~d~V   77 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGH--DVIILDNLCNSKRSVLPVIERLG-GKHPTFVEGDIRNEALMTEILHDHAIDTV   77 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSSCCTTHHHHHHHHH-TSCCEEEECCTTCHHHHHHHHHHTTCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC--EEEEEECCCCcchhhHHHHHhhc-CCCCEEEEeecCCHHHHHHHHhccCCCEE
Confidence            7999999999999999999999987  999999744  222222222221 123333221 12   3445566  78999


Q ss_pred             EEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           93 IIPAGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        93 ii~ag~p~k~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      |.+|+.+..+-  +...+.+..|+...+.+.+.++++...-+|...|
T Consensus        78 iHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss  124 (338)
T d1udca_          78 IHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSS  124 (338)
T ss_dssp             EECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred             EECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCc
Confidence            99987642111  2345778999999999999999987666554443

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=98.31  E-value=6.6e-07  Score=77.60  Aligned_cols=71  Identities=14%  Similarity=0.250  Sum_probs=52.3

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhccc--------CCCeEEEEeCCCChhhhcCCCcE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD--------TGAVVRGFLGQPQLENALTGMDL   91 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~--------~~~~v~~~~~t~dl~~al~~ADi   91 (369)
                      ..||+|||| |..|+++|..|..++.  +|.||+.++.......-.+..        .+.++..   ++|+++++++||+
T Consensus         7 m~KI~ViGa-G~wGtAlA~~La~~g~--~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~---t~~l~~a~~~ad~   80 (189)
T d1n1ea2           7 LNKAVVFGS-GAFGTALAMVLSKKCR--EVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITF---TSDVEKAYNGAEI   80 (189)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHTTEE--EEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEE---ESCHHHHHTTCSC
T ss_pred             eceEEEECC-CHHHHHHHHHHHHcCC--eEEEEEecHHHHHHHhhccccccccccccccccccc---chhhhhccCCCCE
Confidence            458999999 9999999999999987  999999976221111111211        2345554   4689999999999


Q ss_pred             EEEcC
Q 017551           92 VIIPA   96 (369)
Q Consensus        92 Vii~a   96 (369)
                      ||++.
T Consensus        81 iiiav   85 (189)
T d1n1ea2          81 ILFVI   85 (189)
T ss_dssp             EEECS
T ss_pred             EEEcC
Confidence            99973

>d1u8xx2 d.162.1.2 (X:170-445) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: AglA-like glucosidase
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=98.26  E-value=2.3e-06  Score=78.43  Aligned_cols=65  Identities=15%  Similarity=0.164  Sum_probs=53.4

Q ss_pred             HHHHHHHHHHHhccCCCCceeEEEeecCCC---CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHH
Q 017551          249 YAAVKFADACLRGLRGDAGVVECAFVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLH  316 (369)
Q Consensus       249 ~a~~~li~ai~~~~~~~~~v~~~~~~~g~~---~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~  316 (369)
                      ..++++++||.+|.+..  ....+.++|.+   |+|.+++|||+|+++|+.++.. ++|++...++++...
T Consensus       153 e~av~ii~ai~~~~~~~--~~vNv~N~G~I~~Lp~d~vVEVp~~V~~~Gi~P~~~-g~lP~~~~~Li~~~k  220 (276)
T d1u8xx2         153 SYIVDLARAIAYNTGER--MLLIVENNGAIANFDPTAMVEVPCIVGSNGPEPITV-GTIPQFQKGLMEQQV  220 (276)
T ss_dssp             HHHHHHHHHHHHTCCEE--EEEEEECTTSBTTSCTTSEEEEEEEEETTEEEECCC-BCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCcE--EEEEeCCCCcCCCCChhhheeeEEEEcCCceEeeec-CCCcHHHHHHHHHHH
Confidence            57789999999997632  33335788886   8899999999999999999775 799999999887544

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=98.20  E-value=1.1e-06  Score=73.21  Aligned_cols=102  Identities=17%  Similarity=0.209  Sum_probs=66.9

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  100 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p~  100 (369)
                      |||+|||+ |.+|+.++..|.+.+.  +|.++|++......................  .+..+++.++|+||++...+ 
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~iii~vka~-   74 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGH--EVQGWLRVPQPYCSVNLVETDGSIFNESLT--ANDPDFLATSDLLLVTLKAW-   74 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSCCSEEEEEEECTTSCEEEEEEE--ESCHHHHHTCSEEEECSCGG-
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCC--ceEEEEcCHHHhhhhccccCCccccccccc--cchhhhhcccceEEEeeccc-
Confidence            89999999 9999999999999998  999999987221111111111111111111  22357889999999985222 


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecCCCCCh
Q 017551          101 KPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNST  143 (369)
Q Consensus       101 k~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNPv~~~  143 (369)
                                     -..+..+.+..+ .++..|+.+.|=++..
T Consensus        75 ---------------~~~~~~~~l~~~~~~~~~Iv~~qNG~~~~  103 (167)
T d1ks9a2          75 ---------------QVSDAVKSLASTLPVTTPILLIHNGMGTI  103 (167)
T ss_dssp             ---------------GHHHHHHHHHTTSCTTSCEEEECSSSCTT
T ss_pred             ---------------chHHHHHhhccccCcccEEeeccCcccHH
Confidence                           134556666655 4788888888876654

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=98.19  E-value=2e-06  Score=78.77  Aligned_cols=114  Identities=21%  Similarity=0.222  Sum_probs=76.6

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC----CCChhhhcCCC--cEEEEc
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG----QPQLENALTGM--DLVIIP   95 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~----t~dl~~al~~A--DiVii~   95 (369)
                      ||.|+||+|+||++++..|..++.  +|+.+|.....+....+.......+++.+.+    ..++.++++++  |+||.+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~--~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~   79 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGI--DLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL   79 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcC--EEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEee
Confidence            899999999999999999999998  9999985432111111111111234444322    12345666654  999999


Q ss_pred             CCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           96 AGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        96 ag~p~k~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      |+....+.  .+.......|+...+.+.+.+.+....-.++..|
T Consensus        80 aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS  123 (338)
T d1orra_          80 AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSS  123 (338)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             cccccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccc
Confidence            87653222  2346777889999999999999987766566555

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=5e-06  Score=76.57  Aligned_cols=110  Identities=14%  Similarity=0.053  Sum_probs=75.2

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  100 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p~  100 (369)
                      +||.|+||+|++|++++..|..++.  +|+.+|..... ....+.+......+.... ...++.++.++|+||.+|+...
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~--~V~~~d~~~~~-~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~d~VihlAa~~~   77 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGH--EVTVVDNFFTG-RKRNVEHWIGHENFELIN-HDVVEPLYIEVDQIYHLASPAS   77 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSSC-CGGGTGGGTTCTTEEEEE-CCTTSCCCCCCSEEEECCSCCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcC--EEEEEeCCCcC-CHHHHHHhcCCCceEEEe-hHHHHHHHcCCCEEEECcccCC
Confidence            5999999999999999999999887  99999864310 001122222223344332 2334567789999999987543


Q ss_pred             CC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe
Q 017551          101 KP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI  136 (369)
Q Consensus       101 k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~  136 (369)
                      .+  .....+.+..|+.....+.+.+++...  .+|.+
T Consensus        78 ~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~--k~I~~  113 (312)
T d2b69a1          78 PPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--RLLLA  113 (312)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC--EEEEE
T ss_pred             chhHHhCHHHHHHHHHHHHHHHHHHHHHcCC--cEEEE
Confidence            21  134566788999999999999988754  34444

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.07  E-value=2.9e-06  Score=74.97  Aligned_cols=110  Identities=17%  Similarity=0.073  Sum_probs=74.1

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEE--EeCCCChhhhcCCCcEEEEcCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG--FLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~--~~~t~dl~~al~~ADiVii~ag   97 (369)
                      .+||.|+||+|++|++++..|.+++.+.+|.+++.+...........    .....  +....++.++++++|+|+.++|
T Consensus        14 ~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~----i~~~~~D~~~~~~~~~~~~~~d~vi~~~~   89 (232)
T d2bkaa1          14 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKN----VNQEVVDFEKLDDYASAFQGHDVGFCCLG   89 (232)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGG----CEEEECCGGGGGGGGGGGSSCSEEEECCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccce----eeeeeeccccccccccccccccccccccc
Confidence            35999999999999999999998887779999998751100000011    11111  1113467788999999999987


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEE
Q 017551           98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN  134 (369)
Q Consensus        98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~vi  134 (369)
                      ... .......+...|......+++...+...+-++.
T Consensus        90 ~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~  125 (232)
T d2bkaa1          90 TTR-GKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNL  125 (232)
T ss_dssp             CCH-HHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEE
T ss_pred             ccc-cccchhhhhhhcccccceeeecccccCcccccc
Confidence            542 122345566778888889999887766554443

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=2.6e-05  Score=67.22  Aligned_cols=98  Identities=15%  Similarity=0.171  Sum_probs=64.3

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC----CCChhhhcCCCcEEEEc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG----QPQLENALTGMDLVIIP   95 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~----t~dl~~al~~ADiVii~   95 (369)
                      .+||+|+||+|++|++++..|+.++.  +|.+++.+..+     +.... ...++.+.+    .+++.++++++|+||.+
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~--~V~~~~R~~~~-----~~~~~-~~~~~~~~gD~~d~~~l~~al~~~d~vi~~   74 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGY--EVTVLVRDSSR-----LPSEG-PRPAHVVVGDVLQAADVDKTVAGQDAVIVL   74 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCGGG-----SCSSS-CCCSEEEESCTTSHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcC--EEEEEEcChhh-----ccccc-ccccccccccccchhhHHHHhcCCCEEEEE
Confidence            45999999999999999999999987  99999987522     11111 122232222    24567889999999998


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCC
Q 017551           96 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPN  130 (369)
Q Consensus        96 ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~  130 (369)
                      +|........     ..+....+.+.+.+++..-+
T Consensus        75 ~g~~~~~~~~-----~~~~~~~~~l~~aa~~~~v~  104 (205)
T d1hdoa_          75 LGTRNDLSPT-----TVMSEGARNIVAAMKAHGVD  104 (205)
T ss_dssp             CCCTTCCSCC-----CHHHHHHHHHHHHHHHHTCC
T ss_pred             eccCCchhhh-----hhhHHHHHHHHHHHHhcCCC
Confidence            8754221111     12344566677777776533

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.03  E-value=7e-06  Score=76.66  Aligned_cols=113  Identities=16%  Similarity=0.018  Sum_probs=76.0

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe--CCCChhhhcCCCcEEEE
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL--GQPQLENALTGMDLVII   94 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~--~t~dl~~al~~ADiVii   94 (369)
                      .+++|||.|+||+|+||++++..|.++++  +|+.+|.........++.    ..++....  ...++.+++++.|.||.
T Consensus        12 ~~~nMKILVTGgsGfIGs~lv~~L~~~g~--~V~~~d~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~d~Vih   85 (363)
T d2c5aa1          12 PSENLKISITGAGGFIASHIARRLKHEGH--YVIASDWKKNEHMTEDMF----CDEFHLVDLRVMENCLKVTEGVDHVFN   85 (363)
T ss_dssp             TTSCCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCCSSSCGGGT----CSEEEECCTTSHHHHHHHHTTCSEEEE
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCcC--EEEEEeCCCccchhhhcc----cCcEEEeechhHHHHHHHhhcCCeEee
Confidence            45789999999999999999999999998  999999765221111111    12222111  11234567789999999


Q ss_pred             cCCCCCCC---CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe
Q 017551           95 PAGVPRKP---GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI  136 (369)
Q Consensus        95 ~ag~p~k~---g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~  136 (369)
                      +|+.....   ..........|......+.....+..-.- ++..
T Consensus        86 ~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~-~i~~  129 (363)
T d2c5aa1          86 LAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKR-FFYA  129 (363)
T ss_dssp             CCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSE-EEEE
T ss_pred             cccccccccccccccccccccccchhhHHHHhHHhhCccc-cccc
Confidence            88654321   23345567789999999999988876544 4443

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=97.96  E-value=1.4e-05  Score=73.35  Aligned_cols=115  Identities=17%  Similarity=0.202  Sum_probs=77.9

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCC----CcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCC----CChhhhcCCCcEE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPL----VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ----PQLENALTGMDLV   92 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~----~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t----~dl~~al~~ADiV   92 (369)
                      |||.|+||+|+||++++..|..+++    ..+++.+|.....+....+........++.+.+.    ........+.|+|
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~v   80 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccccccceE
Confidence            7999999999999999999988763    4678888876522222222222223455544321    1234567999999


Q ss_pred             EEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe
Q 017551           93 IIPAGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI  136 (369)
Q Consensus        93 ii~ag~p~k~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~  136 (369)
                      +..|+.+....  ......+..|+.....+.+.+.++...- +|.+
T Consensus        81 i~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~-~I~~  125 (322)
T d1r6da_          81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGR-VVHV  125 (322)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCE-EEEE
T ss_pred             EeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCce-EEEe
Confidence            99987654221  2345567889999999999999887654 4444

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.94  E-value=1e-05  Score=67.61  Aligned_cols=64  Identities=20%  Similarity=0.254  Sum_probs=48.7

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      |||+|||. |.||+++|..|+.+++  +|..||++...  +.++....  .  ..   ..+..++++++|+||++-
T Consensus         1 MkIgiIGl-G~MG~~~A~~L~~~G~--~V~~~d~~~~~--~~~~~~~~--~--~~---~~~~~e~~~~~d~ii~~v   64 (161)
T d1vpda2           1 MKVGFIGL-GIMGKPMSKNLLKAGY--SLVVSDRNPEA--IADVIAAG--A--ET---ASTAKAIAEQCDVIITML   64 (161)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTC--EEEEECSCHHH--HHHHHHTT--C--EE---CSSHHHHHHHCSEEEECC
T ss_pred             CEEEEEeh-hHHHHHHHHHHHHCCC--eEEEEeCCcch--hHHHHHhh--h--hh---cccHHHHHhCCCeEEEEc
Confidence            79999999 9999999999999998  99999997522  22233211  1  11   245678999999999983

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=97.91  E-value=2e-05  Score=72.80  Aligned_cols=105  Identities=14%  Similarity=0.119  Sum_probs=72.1

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCC-C---C-hhhhcCCCcEEEEc
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ-P---Q-LENALTGMDLVIIP   95 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t-~---d-l~~al~~ADiVii~   95 (369)
                      |||.|+||+|+||++++..|+.++.. +|+.+|..... . ..+..   .++++.+.+. +   + .+.+++++|+||..
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~-~V~~ld~~~~~-~-~~~~~---~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~   74 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHY-EVYGLDIGSDA-I-SRFLN---HPHFHFVEGDISIHSEWIEYHVKKCDVVLPL   74 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTC-EEEEEESCCGG-G-GGGTT---CTTEEEEECCTTTCSHHHHHHHHHCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCC-EEEEEeCCCcc-h-hhhcc---CCCeEEEECccCChHHHHHHHHhCCCccccc
Confidence            79999999999999999988887732 88999986421 1 11111   2445544321 1   2 23477899999999


Q ss_pred             CCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhCCCe
Q 017551           96 AGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNA  131 (369)
Q Consensus        96 ag~p~k~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a  131 (369)
                      |+....++  ......+..|+.....+++.+.+....-
T Consensus        75 a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~~~  112 (342)
T d2blla1          75 VAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRI  112 (342)
T ss_dssp             BCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEE
T ss_pred             cccccccccccCCccccccccccccccccccccccccc
Confidence            87654222  2234567899999999999998876544

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=97.89  E-value=6.8e-06  Score=70.77  Aligned_cols=110  Identities=17%  Similarity=0.240  Sum_probs=64.9

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHH-----------HHhhcccCCCeEEEEeCCCChhhhcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVT-----------ADISHMDTGAVVRGFLGQPQLENALT   87 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~-----------~dL~~~~~~~~v~~~~~t~dl~~al~   87 (369)
                      |||+|||. |++|.++|..++ .+.  +|+.||+++..  ..-           .++... .......   +++...+..
T Consensus         1 MkI~ViGl-G~vGl~~a~~~a-~g~--~V~g~Din~~~v~~l~~g~~p~~e~~l~~~~~~-~~~~~~~---~~~~~~~~~   72 (196)
T d1dlja2           1 MKIAVAGS-GYVGLSLGVLLS-LQN--EVTIVDILPSKVDKINNGLSPIQDEYIEYYLKS-KQLSIKA---TLDSKAAYK   72 (196)
T ss_dssp             CEEEEECC-SHHHHHHHHHHT-TTS--EEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHH-SCCCEEE---ESCHHHHHH
T ss_pred             CEEEEECC-ChhHHHHHHHHH-CCC--cEEEEECCHHHHHHHhhcccccchhhHHHHhhh-hhhhhhc---cchhhhhhh
Confidence            89999998 999999997665 577  99999999711  110           111111 1123332   245567889


Q ss_pred             CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec-CCCCCh
Q 017551           88 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS-NPVNST  143 (369)
Q Consensus        88 ~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t-NPv~~~  143 (369)
                      ++|+|+++...|........     ....+....+.+....+..++++-| -|.+..
T Consensus        73 ~~~ii~v~vpt~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~~iii~Stv~pgt~  124 (196)
T d1dlja2          73 EAELVIIATPTNYNSRINYF-----DTQHVETVIKEVLSVNSHATLIIKSTIPIGFI  124 (196)
T ss_dssp             HCSEEEECCCCCEETTTTEE-----CCHHHHHHHHHHHHHCSSCEEEECSCCCTTHH
T ss_pred             ccccccccCCccccccCCCc-----ceeEEeehhhhhhhcccceeEEeeeecCceee
Confidence            99999998766643211111     1233445555555666666555443 344433

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.85  E-value=3.1e-05  Score=72.96  Aligned_cols=116  Identities=14%  Similarity=0.113  Sum_probs=76.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHH------------------HHhhcccCCCeEEEEeC-CC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVT------------------ADISHMDTGAVVRGFLG-QP   80 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~------------------~dL~~~~~~~~v~~~~~-t~   80 (369)
                      .|||.|+||+|++|++++..|++.|+  +|+.+|........                  ..+... ...+++.+.+ -+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~--~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~Dl~   77 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNY--EVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKAL-TGKSIELYVGDIC   77 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHH-HCCCCEEEESCTT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcC--EEEEEecCCcccccccccccccccccchHHHHHHHHhh-cCCCcEEEEccCC
Confidence            37999999999999999999999998  99999943211000                  000000 1234444322 12


Q ss_pred             C---hhhhcCC--CcEEEEcCCCCCCCC--CC---HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 017551           81 Q---LENALTG--MDLVIIPAGVPRKPG--MT---RDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        81 d---l~~al~~--ADiVii~ag~p~k~g--~~---r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      |   +.+++++  .|+|+..|+...-+.  .+   ..+....|+.....+.+.+.+++.+..++..|.
T Consensus        78 d~~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss  145 (393)
T d1i24a_          78 DFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGT  145 (393)
T ss_dssp             SHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECC
T ss_pred             CHHHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeeccc
Confidence            2   3445554  499999987643211  22   235678899999999999999998887766653

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=97.80  E-value=0.00016  Score=66.74  Aligned_cols=107  Identities=13%  Similarity=0.019  Sum_probs=71.4

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcccC-CCeEEEEe----CCCChhhhcCCCcEE
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDT-GAVVRGFL----GQPQLENALTGMDLV   92 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~-~~~v~~~~----~t~dl~~al~~ADiV   92 (369)
                      +..+|.|+||+|+||+.++..|+++|+  +|+....+.. ......+.+... ......+.    ...++.++++++|.|
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~--~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v   87 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGY--KVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGV   87 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcC--EEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhh
Confidence            457999999999999999999999987  8776665541 111111111111 11222111    123456789999999


Q ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC
Q 017551           93 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC  128 (369)
Q Consensus        93 ii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~  128 (369)
                      +..++... ...+...+...|+....++.+.+.++.
T Consensus        88 ~~~a~~~~-~~~~~~~~~~~nv~gt~~ll~~~~~~~  122 (342)
T d1y1pa1          88 AHIASVVS-FSNKYDEVVTPAIGGTLNALRAAAATP  122 (342)
T ss_dssp             EECCCCCS-CCSCHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred             hhhccccc-ccccccccccchhhhHHHHHHhhhccc
Confidence            99876542 345566677789999999999998864

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=97.80  E-value=8e-05  Score=62.08  Aligned_cols=94  Identities=18%  Similarity=0.238  Sum_probs=60.3

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP   99 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p   99 (369)
                      +||+|||+ |.+|++++..|+.+++..+|+.||.+. ....+.++...    . ...  +........++|+||++.  |
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~----~-~~~--~~~~~~~~~~~dlIila~--p   71 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGII----D-EGT--TSIAKVEDFSPDFVMLSS--P   71 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSC----S-EEE--SCGGGGGGTCCSEEEECS--C
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcc----h-hhh--hhhhhhhccccccccccC--C
Confidence            37999999 999999999999998766899999986 22223322211    1 111  122234557999999984  2


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 017551          100 RKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  138 (369)
Q Consensus       100 ~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN  138 (369)
                                    ...+.++.+.+..+. ++.+++-++.
T Consensus        72 --------------~~~~~~vl~~l~~~~~~~~ii~d~~s   97 (171)
T d2g5ca2          72 --------------VRTFREIAKKLSYILSEDATVTDQGS   97 (171)
T ss_dssp             --------------HHHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred             --------------chhhhhhhhhhhcccccccccccccc
Confidence                          123445555565554 6777666554

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=97.78  E-value=3e-05  Score=72.52  Aligned_cols=114  Identities=16%  Similarity=0.050  Sum_probs=71.7

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch---hHHHHhhcc--cCCCeEEEEeC----CCChhhhcCCC--c
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP---GVTADISHM--DTGAVVRGFLG----QPQLENALTGM--D   90 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~---g~~~dL~~~--~~~~~v~~~~~----t~dl~~al~~A--D   90 (369)
                      +|.|+||+|++|++++..|++.+.  +|+.+|.....   .....+...  ....++....+    ..++++.+++.  |
T Consensus         3 ~vLITGatGfiGs~lv~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (357)
T d1db3a_           3 VALITGVTGQDGSYLAEFLLEKGY--EVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD   80 (357)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC--EEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCcC--EEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCC
Confidence            455999999999999999999988  99999985410   111111111  11345554422    12334556655  9


Q ss_pred             EEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhC--CCeEEEEec
Q 017551           91 LVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCC--PNATVNLIS  137 (369)
Q Consensus        91 iVii~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~t  137 (369)
                      +|+.+|+.+..+  .......+..|+.....+.+.+++++  ....+|.+|
T Consensus        81 ~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~S  131 (357)
T d1db3a_          81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQAS  131 (357)
T ss_dssp             EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEE
T ss_pred             EEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEE
Confidence            999998875432  24556677889999999999998876  234566554

>d1s6ya2 d.162.1.2 (A:173-445) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: AglA-like glucosidase
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.77  E-value=7.1e-05  Score=67.90  Aligned_cols=65  Identities=14%  Similarity=0.129  Sum_probs=54.7

Q ss_pred             HHHHHHHHHHHhccCCCCceeEE-EeecCCC---CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHH
Q 017551          249 YAAVKFADACLRGLRGDAGVVEC-AFVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHL  317 (369)
Q Consensus       249 ~a~~~li~ai~~~~~~~~~v~~~-~~~~g~~---~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~  317 (369)
                      ..++++++||.+|.+.   ++.+ +.++|.+   |+|++++|||+|+++|+.++.. ++|++...++++....
T Consensus       146 e~a~~ii~ai~~~~~~---~~~vNv~N~G~I~nLp~d~vVEVp~~V~~~Gi~P~~~-g~lP~~~~~Li~~~~~  214 (270)
T d1s6ya2         146 DAACSLISSIYNDKRD---IQPVNTRNNGAIASISAESAVEVNCVITKDGPKPIAV-GDLPVAVRGLVQQIKS  214 (270)
T ss_dssp             HHHHHHHHHHHHTCCC---EEEEEEECTTSBTTSCTTSEEEEEEEEETTEEEECCC-BCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCe---EEEEECCCCCcCCCCCccceEEEEEEEECCceEeeec-CCCcHHHHHHHHHHHH
Confidence            7889999999999774   3444 4688887   8999999999999999999775 7999999998886553

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.74  E-value=4.5e-05  Score=70.66  Aligned_cols=113  Identities=19%  Similarity=0.058  Sum_probs=73.8

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEeC-CCC---hhhhcC--CCcEEE
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLG-QPQ---LENALT--GMDLVI   93 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~~-t~d---l~~al~--~ADiVi   93 (369)
                      .|.|+||+|++|++++..|+.++.  +|+.+|....  ......+.... ...++.+.+ -+|   ++.+++  +.|+||
T Consensus         3 ~ILVTGatGfIG~~lv~~Ll~~g~--~V~~~d~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi   79 (347)
T d1z45a2           3 IVLVTGGAGYIGSHTVVELIENGY--DCVVADNLSNSTYDSVARLEVLT-KHHIPFYEVDLCDRKGLEKVFKEYKIDSVI   79 (347)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSSCCTHHHHHHHHHH-TSCCCEEECCTTCHHHHHHHHHHSCCCEEE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCcC--eEEEEECCCCcchhHHHhHHhhc-ccCCeEEEeecCCHHHHHHHHhccCCCEEE
Confidence            588999999999999999999987  9999996431  11111111111 122222221 122   333443  789999


Q ss_pred             EcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           94 IPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        94 i~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      .+|+.+...  .+....+...|......+.+...+.....++..-|
T Consensus        80 hlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS  125 (347)
T d1z45a2          80 HFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSS  125 (347)
T ss_dssp             ECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred             EccccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecc
Confidence            998765322  23456677889999999999999887776555544

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.67  E-value=7.7e-05  Score=62.18  Aligned_cols=64  Identities=22%  Similarity=0.402  Sum_probs=48.7

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      +||+|||. |.+|+++|..|.++++  +|..||++..+  ..++....   ...    ..++.++++++|+|++..
T Consensus         2 ~kIg~IGl-G~MG~~iA~~L~~~g~--~v~~~d~~~~~--~~~~~~~~---~~~----~~~~~e~~~~~diii~~v   65 (162)
T d3cuma2           2 KQIAFIGL-GHMGAPMATNLLKAGY--LLNVFDLVQSA--VDGLVAAG---ASA----ARSARDAVQGADVVISML   65 (162)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTC--EEEEECSSHHH--HHHHHHTT---CEE----CSSHHHHHTSCSEEEECC
T ss_pred             CEEEEEEE-HHHHHHHHHHHHHCCC--eEEEEECchhh--hhhhhhhh---ccc----cchhhhhccccCeeeecc
Confidence            59999999 9999999999999998  99999987522  22333321   111    245678999999999974

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=97.65  E-value=3.7e-05  Score=63.68  Aligned_cols=65  Identities=18%  Similarity=0.270  Sum_probs=47.4

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      |||+|||+ |.+|++++..|...+.  ++.++|.+..+  ..++.... .  +.   ...+..+++++||+||++.
T Consensus         1 MkIg~IG~-G~mG~al~~~l~~~~~--~i~v~~r~~~~--~~~l~~~~-g--~~---~~~~~~~~~~~~dvIilav   65 (152)
T d2ahra2           1 MKIGIIGV-GKMASAIIKGLKQTPH--ELIISGSSLER--SKEIAEQL-A--LP---YAMSHQDLIDQVDLVILGI   65 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTTSSC--EEEEECSSHHH--HHHHHHHH-T--CC---BCSSHHHHHHTCSEEEECS
T ss_pred             CEEEEEec-cHHHHHHHHHHHhCCC--eEEEEcChHHh--HHhhcccc-c--ee---eechhhhhhhccceeeeec
Confidence            79999999 9999999999988876  99999987522  12222111 0  11   1346778899999999985

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=97.64  E-value=6.8e-05  Score=69.37  Aligned_cols=110  Identities=17%  Similarity=0.133  Sum_probs=72.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC----CCChhhhcCCCcEEEEc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG----QPQLENALTGMDLVIIP   95 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~----t~dl~~al~~ADiVii~   95 (369)
                      .|||.|+||+|+||++++..|..++.--.++.+|.....+....+... ....+....+    ...+.+++++.|.|+..
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~-~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~   80 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI-LGDRVELVVGDIADAELVDKLAAKADAIVHY   80 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG-CSSSEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHh-hcCCeEEEEccCCCHHHHHHHHhhhhhhhhh
Confidence            589999999999999999999888763356667753311111111111 1234444332    13456778999999998


Q ss_pred             CCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhCCC
Q 017551           96 AGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPN  130 (369)
Q Consensus        96 ag~p~k~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~  130 (369)
                      |+......  ....+.+..|+.....+.....+....
T Consensus        81 a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~k  117 (346)
T d1oc2a_          81 AAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIR  117 (346)
T ss_dssp             CSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCE
T ss_pred             hhcccccchhhCcccceeeehHhHHhhhhhhcccccc
Confidence            87654322  223566788999999999999888753

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=97.62  E-value=4.6e-05  Score=70.32  Aligned_cols=113  Identities=17%  Similarity=0.160  Sum_probs=73.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEeC-CCC---hhhhcC--CCcE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLG-QPQ---LENALT--GMDL   91 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~~-t~d---l~~al~--~ADi   91 (369)
                      .+||.|+||+|+||+.++..|+..+.  +|+.+|.+..  ..... ....  ...++...+ -+|   +.++++  ..|+
T Consensus         8 ~KkILVTG~tGfIGs~lv~~Ll~~g~--~V~~~~r~~~~~~~~~~-~~~~--~~~i~~~~~Dl~d~~~l~~~~~~~~~~~   82 (356)
T d1rkxa_           8 GKRVFVTGHTGFKGGWLSLWLQTMGA--TVKGYSLTAPTVPSLFE-TARV--ADGMQSEIGDIRDQNKLLESIREFQPEI   82 (356)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCSSSSCHHH-HTTT--TTTSEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCCCccHHHHh-hhhc--ccCCeEEEeeccChHhhhhhhhhchhhh
Confidence            47999999999999999999999998  9999998762  22211 1111  122333221 122   234444  4588


Q ss_pred             EEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           92 VIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        92 Vii~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      |+..++.+-..  ...-......|+.....+...+.+......++..|
T Consensus        83 v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s  130 (356)
T d1rkxa_          83 VFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNIT  130 (356)
T ss_dssp             EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEEC
T ss_pred             hhhhhccccccccccCCccccccccccchhhhhhhhcccccccccccc
Confidence            88887654211  12235566789999999999999887666555443

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=97.60  E-value=3e-05  Score=72.76  Aligned_cols=107  Identities=17%  Similarity=0.085  Sum_probs=68.8

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC-CCC---hhhhcC--CCcEEEE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QPQ---LENALT--GMDLVII   94 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~-t~d---l~~al~--~ADiVii   94 (369)
                      |||.|+||+|++|++++..|+..+. ..++++|.....+....+.+......+..+.+ -+|   +.+.++  +.|+||.
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~-~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vih   79 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQ-DTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMH   79 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCS-CEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC-CEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEE
Confidence            7999999999999999999988876 24778886542222222333333345665432 123   233333  5899999


Q ss_pred             cCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhC
Q 017551           95 PAGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCC  128 (369)
Q Consensus        95 ~ag~p~k~g--~~r~~~~~~N~~i~~~i~~~i~~~~  128 (369)
                      +|+.+..+-  ......+..|+.....+.+.+.++.
T Consensus        80 lAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~  115 (361)
T d1kewa_          80 LAAESHVDRSITGPAAFIETNIVGTYALLEVARKYW  115 (361)
T ss_dssp             CCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             CccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhh
Confidence            987543111  1234567888888888888877653

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=97.58  E-value=0.0003  Score=65.77  Aligned_cols=114  Identities=13%  Similarity=0.099  Sum_probs=72.5

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHh-CCCCcEEEEEeCCC-----------chhHHHHhhccc------CCCeEEEEeC-CC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKI-NPLVSVLHLYDVVN-----------TPGVTADISHMD------TGAVVRGFLG-QP   80 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~-~~~~~el~L~D~~~-----------~~g~~~dL~~~~------~~~~v~~~~~-t~   80 (369)
                      -|||.|+||+|+||++++..|++ .+.  +|+.+|.-.           .......+.+..      ....+....+ -+
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~--~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~   79 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNH--SVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVR   79 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCC--EEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTT
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCC--EEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECccc
Confidence            48999999999999999987765 677  999999421           111222222211      1123333321 12


Q ss_pred             C---hhhhc---CCCcEEEEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEE
Q 017551           81 Q---LENAL---TGMDLVIIPAGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNL  135 (369)
Q Consensus        81 d---l~~al---~~ADiVii~ag~p~k~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv  135 (369)
                      |   +.+++   +++|+|+.+|+....+.  .........|+.....+.....+..+...+..
T Consensus        80 d~~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~  142 (383)
T d1gy8a_          80 NEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFS  142 (383)
T ss_dssp             CHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CHHHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCcccccc
Confidence            2   23333   57899999987643221  23445678899999999999998887765543

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.55  E-value=8e-05  Score=63.73  Aligned_cols=81  Identities=15%  Similarity=0.152  Sum_probs=57.0

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEE-eCCCChhhhcCCCcEEE
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF-LGQPQLENALTGMDLVI   93 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~-~~t~dl~~al~~ADiVi   93 (369)
                      .-+.++|.|+||+|++|..++..|++.+.  +|+++|++..  ...+..+............ +..++.++++.++|+||
T Consensus        20 ~l~gK~vlItGasgGIG~~ia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDili   97 (191)
T d1luaa1          20 SVKGKKAVVLAGTGPVGMRSAALLAGEGA--EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVF   97 (191)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEE
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHhhcc--chhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeee
Confidence            44567999999999999999999999997  9999999872  2233333321111122222 22346778899999999


Q ss_pred             EcCCCC
Q 017551           94 IPAGVP   99 (369)
Q Consensus        94 i~ag~p   99 (369)
                      ..+|.+
T Consensus        98 n~Ag~g  103 (191)
T d1luaa1          98 TAGAIG  103 (191)
T ss_dssp             ECCCTT
T ss_pred             ecCccc
Confidence            998864

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.55  E-value=0.00018  Score=65.27  Aligned_cols=115  Identities=15%  Similarity=0.015  Sum_probs=74.3

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC-CCCh---hhhc--CCCcEEEE
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QPQL---ENAL--TGMDLVII   94 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~-t~dl---~~al--~~ADiVii   94 (369)
                      +||.|+||+|+||++++..|+.+|+  +|+.+|..........+.+.....+++.+.+ -.|.   .+.+  ...++++.
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~   78 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGY--RVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYN   78 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC--EEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccc
Confidence            4899999999999999999999998  9999998652111111222222345554432 1222   1112  24566666


Q ss_pred             cCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           95 PAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        95 ~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      .++.....  -......+..|+.....+.+.+.++.+...++..|
T Consensus        79 ~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~S  123 (321)
T d1rpna_          79 LAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQAS  123 (321)
T ss_dssp             CCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred             ccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCccccccc
Confidence            66443221  13456678889999999999999998777666654

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=97.52  E-value=9.2e-05  Score=62.38  Aligned_cols=74  Identities=12%  Similarity=0.200  Sum_probs=47.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      .|||+|||. |.+|++++..|+.+++  +|..||++..+  .......+....+.........++...+..++.+++..
T Consensus         1 ~MkIGvIGl-G~MG~~ma~~L~~~G~--~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (178)
T d1pgja2           1 SMDVGVVGL-GVMGANLALNIAEKGF--KVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILV   76 (178)
T ss_dssp             CBSEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECC
T ss_pred             CCEEEEEee-hHHHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEee
Confidence            489999999 9999999999999998  99999998622  22222222222233333211123445667777777763

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.49  E-value=7.3e-05  Score=64.25  Aligned_cols=107  Identities=12%  Similarity=0.085  Sum_probs=68.5

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCC-CC-hhhhcCCCcEEEEcCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ-PQ-LENALTGMDLVIIPAG   97 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t-~d-l~~al~~ADiVii~ag   97 (369)
                      ++||.|+||+|++|++++..|...+...+|+..-.+....          .+.+...... .+ ......+.|.|+..+|
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~----------~~~~~~~~~d~~~~~~~~~~~~d~vi~~~g   71 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE----------HPRLDNPVGPLAELLPQLDGSIDTAFCCLG   71 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC----------CTTEECCBSCHHHHGGGCCSCCSEEEECCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh----------cccccccccchhhhhhccccchheeeeeee
Confidence            4699999999999999999999988755666555443110          1122211100 01 1223356799999987


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ...........+...|......+++..++...+-+ +.+|
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~-i~~S  110 (212)
T d2a35a1          72 TTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHY-LVVS  110 (212)
T ss_dssp             CCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEE-EEEC
T ss_pred             eeccccccccccccchhhhhhhccccccccccccc-cccc
Confidence            65433344556778888888889988887655554 4443

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.47  E-value=0.00021  Score=65.65  Aligned_cols=171  Identities=16%  Similarity=0.037  Sum_probs=99.7

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--h-h--HHHHhhcccCCCeEEEEeC-CCC---hhhhcCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--P-G--VTADISHMDTGAVVRGFLG-QPQ---LENALTG   88 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~-g--~~~dL~~~~~~~~v~~~~~-t~d---l~~al~~   88 (369)
                      .++++|.|+||+|++|++++..|.+.+.  +|..+|....  . .  ....+........++...+ ..|   ......+
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~   91 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQ--KVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAG   91 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTT
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcC--EEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccccc
Confidence            3466999999999999999999999998  9999997431  1 1  1111211111233443322 122   3356688


Q ss_pred             CcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC------CChhHHHHHHHHHhCCCCCC
Q 017551           89 MDLVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV------NSTVPIAAEVFKKAGTYDPK  160 (369)
Q Consensus        89 ADiVii~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv------~~~t~i~ae~~~~~~~~~~~  160 (369)
                      .|.|+..+..+.-+  .......+..|+.....+.+.+.+.....+|..-|.-+      ...+    |    ..-..|.
T Consensus        92 ~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~----E----~~~~~p~  163 (341)
T d1sb8a_          92 VDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKV----E----DTIGKPL  163 (341)
T ss_dssp             CSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBC----T----TCCCCCC
T ss_pred             ccccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCcc----C----CCCCCCC
Confidence            89999887554322  23446677899999999999999887666555444211      1111    0    0011122


Q ss_pred             cEEEechhcHHHHHHHHHHHhCCCCCCCce-eEEeecCC
Q 017551          161 KLLGVTMLDVVRANTFVAEVLGLDPRDVDV-PVVGGHAG  198 (369)
Q Consensus       161 kviG~t~Ld~~R~~~~la~~lgv~~~~V~~-~viG~hg~  198 (369)
                      ..-|.+-+..-++-..+++..+++..-++. .|.|.+.+
T Consensus       164 ~~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~  202 (341)
T d1sb8a_         164 SPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQD  202 (341)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCC
T ss_pred             CcchHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcC
Confidence            233333233344545556777776555563 47776543

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=97.46  E-value=0.00017  Score=60.70  Aligned_cols=97  Identities=15%  Similarity=0.167  Sum_probs=61.5

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhccc-CCCeEEEEeCCCChhhhcCCCcEEEEcCCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD-TGAVVRGFLGQPQLENALTGMDLVIIPAGVP   99 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~-~~~~v~~~~~t~dl~~al~~ADiVii~ag~p   99 (369)
                      .+|+|||. |.||++++..|..+++  +|+.||++..+  +.++.... ............++.+++.++|.+++.... 
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~--~V~v~dr~~~~--~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~-   76 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGF--VVCAFNRTVSK--VDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKA-   76 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSTHH--HHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCT-
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCC--eEEEEcCCHHH--HHHHHHhccccccccchhhhhhhhhhhcccceEEEecCc-
Confidence            38999999 9999999999999998  99999998632  22232221 111222222234566888999999997411 


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEec
Q 017551          100 RKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS  137 (369)
Q Consensus       100 ~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t  137 (369)
                                    .+.+.++...+.... |..++|..|
T Consensus        77 --------------~~~v~~v~~~l~~~~~~g~iiid~s  101 (176)
T d2pgda2          77 --------------GQAVDNFIEKLVPLLDIGDIIIDGG  101 (176)
T ss_dssp             --------------THHHHHHHHHHHHHCCTTCEEEECS
T ss_pred             --------------hHHHHHHHHHHHhccccCcEEEecC
Confidence                          123344445555554 555565554

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.38  E-value=0.00029  Score=56.31  Aligned_cols=98  Identities=21%  Similarity=0.154  Sum_probs=59.8

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCC---hhh-hcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ---LEN-ALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~d---l~~-al~~ADiVii~a   96 (369)
                      |||.|+|+ |.+|+.++..|...+.  +++++|.++..  +..+.... ...+- +...+|   +.+ .+++||.++.+.
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~--~v~vid~d~~~--~~~~~~~~-~~~vi-~Gd~~~~~~l~~~~i~~a~~vv~~t   73 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGH--DIVLIDIDKDI--CKKASAEI-DALVI-NGDCTKIKTLEDAGIEDADMYIAVT   73 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESCHHH--HHHHHHHC-SSEEE-ESCTTSHHHHHHTTTTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCC--CcceecCChhh--hhhhhhhh-hhhhc-cCcccchhhhhhcChhhhhhhcccC
Confidence            79999999 9999999999999998  99999998621  11122111 11111 111222   222 268999999873


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 017551           97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  140 (369)
Q Consensus        97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv  140 (369)
                      .-.           ..|+- +..   .+++++++-++..+.||.
T Consensus        74 ~~d-----------~~N~~-~~~---~~k~~~~~~iI~~~~~~~  102 (132)
T d1lssa_          74 GKE-----------EVNLM-SSL---LAKSYGINKTIARISEIE  102 (132)
T ss_dssp             SCH-----------HHHHH-HHH---HHHHTTCCCEEEECSSTT
T ss_pred             CcH-----------HHHHH-HHH---HHHHcCCceEEEEecCHH
Confidence            211           34542 222   334567776666666665

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.33  E-value=0.00028  Score=58.08  Aligned_cols=93  Identities=11%  Similarity=0.027  Sum_probs=58.9

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCC--CCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINP--LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~--~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      +||+|+||+|.||+-+...|..++  ...+++++......+......+    ..+.... ..+ .++++++|+||.+.+ 
T Consensus         2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~----~~~~~~~-~~~-~~~~~~~DivF~a~~-   74 (146)
T d1t4ba1           2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGG----TTGTLQD-AFD-LEALKALDIIVTCQG-   74 (146)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGT----CCCBCEE-TTC-HHHHHTCSEEEECSC-
T ss_pred             cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccC----Cceeeec-ccc-hhhhhcCcEEEEecC-
Confidence            499999999999999997666654  4668888877653222111111    1111111 123 357899999999862 


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEE
Q 017551           99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL  135 (369)
Q Consensus        99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv  135 (369)
                                     ..+.+++++.+.+...+++||-
T Consensus        75 ---------------~~~s~~~~~~~~~~g~~~~VID   96 (146)
T d1t4ba1          75 ---------------GDYTNEIYPKLRESGWQGYWID   96 (146)
T ss_dssp             ---------------HHHHHHHHHHHHHTTCCCEEEE
T ss_pred             ---------------chHHHHhhHHHHhcCCCeeccc
Confidence                           3456677777776655555433

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=97.32  E-value=0.00012  Score=60.13  Aligned_cols=64  Identities=17%  Similarity=0.180  Sum_probs=46.1

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      |||+|||. |.+|+.++..|.++++  ++..+|.+....... .....   .+..     +..+++++||+||++.
T Consensus         1 MkIgiIG~-G~mG~~ia~~l~~~g~--~v~~~~~~~~~~~~~-~~~~~---~~~~-----~~~e~~~~~diIi~~v   64 (152)
T d1i36a2           1 LRVGFIGF-GEVAQTLASRLRSRGV--EVVTSLEGRSPSTIE-RARTV---GVTE-----TSEEDVYSCPVVISAV   64 (152)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTC--EEEECCTTCCHHHHH-HHHHH---TCEE-----CCHHHHHTSSEEEECS
T ss_pred             CEEEEEcH-HHHHHHHHHHHHHCCC--eEEEEcCchhHHHHH-hhhcc---cccc-----cHHHHHhhcCeEEEEe
Confidence            79999999 9999999999999998  899999776221111 11111   1111     2368899999999984

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.30  E-value=0.00031  Score=64.61  Aligned_cols=110  Identities=19%  Similarity=0.111  Sum_probs=69.3

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--------chhHHHHhhcccCCCeEEEEeC-CCC---hhhhcCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--------TPGVTADISHMDTGAVVRGFLG-QPQ---LENALTG   88 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--------~~g~~~dL~~~~~~~~v~~~~~-t~d---l~~al~~   88 (369)
                      .||.|+||+|+||++++..|+.++.  +|+.+|...        .......+.... ..++..+.+ -+|   +++++.+
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~--~V~~ld~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~l~~~~~~   79 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGY--LPVVIDNFHNAFRGGGSLPESLRRVQELT-GRSVEFEEMDILDQGALQRLFKK   79 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTC--CEEEEECSSSSCBCSSSSBHHHHHHHHHH-TCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcC--EEEEEECCCccccccccchHHHHHHHHhc-CCCcEEEEeeccccccccccccc
Confidence            4999999999999999999999887  899998532        011111111111 234443322 123   3445555


Q ss_pred             Cc--EEEEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhCCCeEE
Q 017551           89 MD--LVIIPAGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATV  133 (369)
Q Consensus        89 AD--iVii~ag~p~k~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a~v  133 (369)
                      .|  +|+..|+.+....  ....+....|+.....+...+.++..+-++
T Consensus        80 ~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i  128 (346)
T d1ek6a_          80 YSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLV  128 (346)
T ss_dssp             CCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             cccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCccccc
Confidence            55  5666776653111  234566788999999999999988766543

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=97.25  E-value=6.2e-05  Score=67.06  Aligned_cols=99  Identities=16%  Similarity=0.155  Sum_probs=64.6

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcC--CCcEEEEcCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLVIIPAGV   98 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~--~ADiVii~ag~   98 (369)
                      |||.|+||+|+||++++..|...+   +++.+|.+... ...|+.+            ..++++.++  +.|+||.+||.
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g---~~v~~~~~~~~-~~~Dl~~------------~~~~~~~i~~~~~D~Vih~Aa~   64 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVG---NLIALDVHSKE-FCGDFSN------------PKGVAETVRKLRPDVIVNAAAH   64 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTS---EEEEECTTCSS-SCCCTTC------------HHHHHHHHHHHCCSEEEECCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCC---CEEEEECCCcc-ccCcCCC------------HHHHHHHHHHcCCCEEEEeccc
Confidence            899999999999999999888776   55666765411 1112211            112344554  45999999986


Q ss_pred             CCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           99 PRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        99 p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ....  ..........|......+.....+.+.  +++++|
T Consensus        65 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~~~s  103 (298)
T d1n2sa_          65 TAVDKAESEPELAQLLNATSVEAIAKAANETGA--WVVHYS  103 (298)
T ss_dssp             CCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC--EEEEEE
T ss_pred             ccccccccCccccccccccccccchhhhhcccc--cccccc
Confidence            5311  234556678888888888888876643  344443

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=97.24  E-value=0.00037  Score=57.42  Aligned_cols=95  Identities=11%  Similarity=0.013  Sum_probs=60.5

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCC--CCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINP--LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~--~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      |||+||||+|++|+-+...|..++  ...++.++.-....+...++.    ........ ..+ .+.++++|+|+.+.  
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~~~~----~~~~~~~~-~~~-~~~~~~~DvvF~al--   72 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFG----KDAGMLHD-AFD-IESLKQLDAVITCQ--   72 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCCCSS----SCCCBCEE-TTC-HHHHTTCSEEEECS--
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccccccC----Ccceeeec-ccc-hhhhccccEEEEec--
Confidence            799999999999999997666543  356888776654322221111    11111111 233 36789999999984  


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      |              -.+.+++++.+.+...+.+||-.|
T Consensus        73 p--------------~~~s~~~~~~l~~~g~~~~VIDlS   97 (147)
T d1mb4a1          73 G--------------GSYTEKVYPALRQAGWKGYWIDAA   97 (147)
T ss_dssp             C--------------HHHHHHHHHHHHHTTCCSEEEESS
T ss_pred             C--------------chHHHHHhHHHHHcCCceEEEeCC
Confidence            2              245668888888777777664433

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=97.21  E-value=0.0002  Score=58.90  Aligned_cols=65  Identities=15%  Similarity=0.119  Sum_probs=44.3

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      |||++||+ |.+|++++..|...+. .++.++|.+...  ...+....   .+...   ++. ++++++|+||++.
T Consensus         1 MkI~fIG~-G~MG~ai~~~l~~~~~-~~i~v~~r~~~~--~~~l~~~~---~~~~~---~~~-~~v~~~Div~lav   65 (152)
T d1yqga2           1 MNVYFLGG-GNMAAAVAGGLVKQGG-YRIYIANRGAEK--RERLEKEL---GVETS---ATL-PELHSDDVLILAV   65 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCS-CEEEEECSSHHH--HHHHHHHT---CCEEE---SSC-CCCCTTSEEEECS
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCC-CcEEEEeCChhH--HHHhhhhc---ccccc---ccc-ccccccceEEEec
Confidence            79999999 9999999987766552 399999998622  12222211   12322   233 5688999999984

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.19  E-value=0.0003  Score=59.86  Aligned_cols=110  Identities=16%  Similarity=0.045  Sum_probs=64.6

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEE-eCCCChhhhcCCCcEEEEcCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~-~~t~dl~~al~~ADiVii~ag~   98 (369)
                      ..+|.|+||+|++|++++..|+.++.--.++.++.+..  ...++....  ..+... ....++.++++++|.||..++.
T Consensus         3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~--~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   78 (252)
T d2q46a1           3 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQ--GKEKIGGEA--DVFIGDITDADSINPAFQGIDALVILTSA   78 (252)
T ss_dssp             CCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHH--HHHHTTCCT--TEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHH--HHHhccCCc--EEEEeeeccccccccccccceeeEEEEee
Confidence            45999999999999999999999886224444444331  112222211  111111 1123456789999999998764


Q ss_pred             CCCC---------C------CCHHHHHHHHHHHHHHHHHHHhhhCCCeEE
Q 017551           99 PRKP---------G------MTRDDLFNINAGIVRTLCEGIAKCCPNATV  133 (369)
Q Consensus        99 p~k~---------g------~~r~~~~~~N~~i~~~i~~~i~~~~p~a~v  133 (369)
                      ...+         .      .........|....+.++......+.....
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (252)
T d2q46a1          79 VPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIV  128 (252)
T ss_dssp             CCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEE
T ss_pred             ccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccc
Confidence            2210         0      112334455666777777777766655433

>d1obba2 d.162.1.2 (A:173-480) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: AglA-like glucosidase
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=97.19  E-value=0.00051  Score=63.20  Aligned_cols=61  Identities=11%  Similarity=0.035  Sum_probs=48.2

Q ss_pred             HHHHHHHHHhccCCCCceeEE-EeecCCC---CCccEEEEEEEEcCCCeEEEccCCCCCHHHHH-HHHH
Q 017551          251 AVKFADACLRGLRGDAGVVEC-AFVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYESG-LFCL  314 (369)
Q Consensus       251 ~~~li~ai~~~~~~~~~v~~~-~~~~g~~---~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~-~L~~  314 (369)
                      ++++|+||.+|.+.   ++.+ +.++|.+   |+|.+++|||+|+++|+.++.-.++|++.-++ +++.
T Consensus       184 a~~ii~ai~~~~~~---~~~vNv~N~G~I~nLp~davVEVpc~v~~~Gi~P~~v~~~lP~~~~~gl~~~  249 (308)
T d1obba2         184 HIPFIDALLNDNKA---RFVVNIPNKGIIHGIDDDVVVEVPALVDKNGIHPEKIEPPLPDRVVKYYLRP  249 (308)
T ss_dssp             HHHHHHHHHHCCCE---EEEEEEECTTSSTTSCTTSEEEEEEEEETTEEEECCCSSCCCHHHHHHTHHH
T ss_pred             HHHHHHHHHcCCCe---EEEEECCCCCcCCCCCccceEEEEEEEeCCceeeeecCCCCChHHHHHHHHH
Confidence            78999999999764   3334 4788987   88999999999999999997632589986644 5543

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.17  E-value=0.0065  Score=53.81  Aligned_cols=117  Identities=18%  Similarity=0.246  Sum_probs=75.4

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC----------hhhhc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ----------LENAL   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d----------l~~al   86 (369)
                      .+.+.|+||+++||..++..|++.|.  .|++.|++.  ....+.++.......++..+. .-++          ..+.+
T Consensus        10 ~Kv~lITGas~GIG~aiA~~la~~G~--~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~   87 (257)
T d1xg5a_          10 DRLALVTGASGGIGAAVARALVQQGL--KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH   87 (257)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            35789999999999999999999998  999999986  344444555433233444332 1122          22335


Q ss_pred             CCCcEEEEcCCCCC-CC--CCC---HHHHHHHH----HHHHHHHHHHHhhhC-CCeEEEEecC
Q 017551           87 TGMDLVIIPAGVPR-KP--GMT---RDDLFNIN----AGIVRTLCEGIAKCC-PNATVNLISN  138 (369)
Q Consensus        87 ~~ADiVii~ag~p~-k~--g~~---r~~~~~~N----~~i~~~i~~~i~~~~-p~a~viv~tN  138 (369)
                      ..-|++|..||... .+  ..+   ....+..|    ....+.+++.+.+.. ..+.|++++-
T Consensus        88 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS  150 (257)
T d1xg5a_          88 SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININS  150 (257)
T ss_dssp             CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECC
T ss_pred             CCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEec
Confidence            67899999988643 22  122   23334444    455666777776665 4677777753

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=97.16  E-value=0.00022  Score=63.01  Aligned_cols=90  Identities=21%  Similarity=0.208  Sum_probs=60.4

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcC--CCcEEEEcCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLVIIPAGV   98 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~--~ADiVii~ag~   98 (369)
                      |||.|+||+|++|+.++..|..+++  +|+.+|....     |+.+.            .++++.++  +.|+||.+++.
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~--~Vi~~~r~~~-----D~~d~------------~~~~~~l~~~~~d~vih~a~~   62 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNV--EVIPTDVQDL-----DITNV------------LAVNKFFNEKKPNVVINCAAH   62 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSE--EEEEECTTTC-----CTTCH------------HHHHHHHHHHCCSEEEECCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC--EEEEeechhc-----cCCCH------------HHHHHHHHHcCCCEEEeeccc
Confidence            8999999999999999999999888  9999997641     22211            11234443  66999998765


Q ss_pred             CCCCC--CCHHHHHHHHHHHHHHHHHHHhhhCC
Q 017551           99 PRKPG--MTRDDLFNINAGIVRTLCEGIAKCCP  129 (369)
Q Consensus        99 p~k~g--~~r~~~~~~N~~i~~~i~~~i~~~~p  129 (369)
                      .....  .........|......+.........
T Consensus        63 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~   95 (281)
T d1vl0a_          63 TAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA   95 (281)
T ss_dssp             CCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC
T ss_pred             cccccccccchhhcccccccccccccccccccc
Confidence            42111  22344556677777777666665543

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.08  E-value=0.00051  Score=54.68  Aligned_cols=69  Identities=12%  Similarity=0.157  Sum_probs=45.9

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEE-EEe-CCCChhhh-cCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVR-GFL-GQPQLENA-LTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~-~~~-~t~dl~~a-l~~ADiVii~a   96 (369)
                      ++++|+|+ |.+|+.++..|...+.  +++++|.++..  +.++.+..  ..+. +.. ...-++++ +.+||.||++.
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~--~vvvid~d~~~--~~~~~~~~--~~~~~gd~~~~~~l~~a~i~~a~~vi~~~   72 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGH--EVLAVDINEEK--VNAYASYA--THAVIANATEENELLSLGIRNFEYVIVAI   72 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTC--CCEEEESCHHH--HHHTTTTC--SEEEECCTTCTTHHHHHTGGGCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCC--eEEEecCcHHH--HHHHHHhC--CcceeeecccchhhhccCCccccEEEEEc
Confidence            37899999 9999999999999998  99999998621  22233322  1221 111 11223343 78999988874

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.07  E-value=0.00046  Score=61.19  Aligned_cols=111  Identities=16%  Similarity=0.214  Sum_probs=69.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEeCCCC------hhhhcCCCcE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQ------LENALTGMDL   91 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~~t~d------l~~al~~ADi   91 (369)
                      .+++.|+||++++|..++..|+..|.  +|++.|+++.  .....++....   .+..  .-+|      ..+.+..-|+
T Consensus         7 GK~~lITGas~GIG~aia~~la~~G~--~V~~~~r~~~~l~~~~~~~~~~~---~~~~--Dv~d~~~v~~~~~~~g~iDi   79 (244)
T d1pr9a_           7 GRRVLVTGAGKGIGRGTVQALHATGA--RVVAVSRTQADLDSLVRECPGIE---PVCV--DLGDWEATERALGSVGPVDL   79 (244)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHSTTCE---EEEC--CTTCHHHHHHHHTTCCCCCE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCC--EEEEEECCHHHHHHHHHhcCCCe---EEEE--eCCCHHHHHHHHHHhCCceE
Confidence            46899999999999999999999998  9999999862  22233332211   1111  1112      2234678899


Q ss_pred             EEEcCCCCCCC---CCCH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEec
Q 017551           92 VIIPAGVPRKP---GMTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        92 Vii~ag~p~k~---g~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      +|..||.....   ..+.   ...+..|+.    +.+.+++.+.+....+.|++++
T Consensus        80 lVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~is  135 (244)
T d1pr9a_          80 LVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVS  135 (244)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEEC
T ss_pred             EEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecc
Confidence            99998875422   1232   334455543    5566666655555567777775

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=96.99  E-value=0.00071  Score=60.14  Aligned_cols=77  Identities=16%  Similarity=0.061  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--h-hHHHHhhcccCCCeEEEEeC----CCChhhhcCCCcE
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--P-GVTADISHMDTGAVVRGFLG----QPQLENALTGMDL   91 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~-g~~~dL~~~~~~~~v~~~~~----t~dl~~al~~ADi   91 (369)
                      +++||.|+||+|++|++++..|...|+  +|+.++.+..  . .....+.... ...++...+    ..++.+++++++.
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~--~V~~~~R~~~~~~~~~~~~~~~~~-~~~v~~v~~d~~d~~~~~~~~~~~~~   78 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGH--PTYVLFRPEVVSNIDKVQMLLYFK-QLGAKLIEASLDDHQRLVDALKQVDV   78 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTC--CEEEECCSCCSSCHHHHHHHHHHH-TTTCEEECCCSSCHHHHHHHHTTCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCC--EEEEEECCCcccchhHHHHHhhhc-cCCcEEEEeecccchhhhhhccCcch
Confidence            456999999999999999999999887  8888887651  1 1111111111 122332211    1335578899999


Q ss_pred             EEEcCCC
Q 017551           92 VIIPAGV   98 (369)
Q Consensus        92 Vii~ag~   98 (369)
                      ++..++.
T Consensus        79 ~~~~~~~   85 (312)
T d1qyda_          79 VISALAG   85 (312)
T ss_dssp             EEECCCC
T ss_pred             hhhhhhh
Confidence            9987653

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.99  E-value=0.00094  Score=59.02  Aligned_cols=112  Identities=15%  Similarity=0.228  Sum_probs=68.5

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeCCCCh------hhhcCCCcE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQL------ENALTGMDL   91 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~t~dl------~~al~~ADi   91 (369)
                      .+++.|+||++++|..++..|+..|.  +|++.|.++  +.....++....   .+..  .-+|.      .+.+..-|+
T Consensus         5 GK~alITGas~GIG~aia~~la~~Ga--~V~~~~r~~~~l~~~~~~~~~~~---~~~~--Dv~~~~~v~~~~~~~g~iDi   77 (242)
T d1cyda_           5 GLRALVTGAGKGIGRDTVKALHASGA--KVVAVTRTNSDLVSLAKECPGIE---PVCV--DLGDWDATEKALGGIGPVDL   77 (242)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHSTTCE---EEEC--CTTCHHHHHHHHTTCCCCSE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHhcCCCe---EEEE--eCCCHHHHHHHHHHcCCCeE
Confidence            46889999999999999999999998  999999986  222223332211   1111  11221      233468899


Q ss_pred             EEEcCCCCCC-C--CCCH---HHHHHHHH----HHHHHHHHHHhhhCCCeEEEEecC
Q 017551           92 VIIPAGVPRK-P--GMTR---DDLFNINA----GIVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        92 Vii~ag~p~k-~--g~~r---~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      +|..||.... +  .++.   ...+..|+    .+.+.+.+.+.+....+.+|+++-
T Consensus        78 lVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS  134 (242)
T d1cyda_          78 LVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSS  134 (242)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred             EEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccch
Confidence            9999987542 2  1232   33344554    344555666555555666777653

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.99  E-value=0.0014  Score=59.77  Aligned_cols=115  Identities=12%  Similarity=0.051  Sum_probs=70.2

Q ss_pred             CEE-EEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc---hhHHHHhhccc---CCCeEEEEeCC-CC---hhhhc--C
Q 017551           21 FKV-AILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMD---TGAVVRGFLGQ-PQ---LENAL--T   87 (369)
Q Consensus        21 ~KI-~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~---~g~~~dL~~~~---~~~~v~~~~~t-~d---l~~al--~   87 (369)
                      +|| .|+||+|+||++++..|..+|+  +|+-+|+...   .+...++....   ...+++.+.+. +|   +..++  .
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~--~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   78 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGY--EVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV   78 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcC--EEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc
Confidence            489 6999999999999999999998  9999998641   11111121111   12345544321 22   22333  3


Q ss_pred             CCcEEEEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhCC--CeEEEEec
Q 017551           88 GMDLVIIPAGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCP--NATVNLIS  137 (369)
Q Consensus        88 ~ADiVii~ag~p~k~g--~~r~~~~~~N~~i~~~i~~~i~~~~p--~a~viv~t  137 (369)
                      +.|+|+..++.+....  ....+....|+.....+.+.+.+++-  ...++.+|
T Consensus        79 ~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~S  132 (347)
T d1t2aa_          79 KPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQAS  132 (347)
T ss_dssp             CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEE
T ss_pred             ccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEec
Confidence            5567777765542211  23456678899999999999988763  34566554

>d1vjta2 d.162.1.2 (A:192-469) Putative alpha-glucosidase TM0752 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: AglA-like glucosidase
domain: Putative alpha-glucosidase TM0752
species: Thermotoga maritima [TaxId: 2336]

Probab=96.97  E-value=0.001  Score=60.26  Aligned_cols=56  Identities=11%  Similarity=-0.035  Sum_probs=42.9

Q ss_pred             HHHHHHHHHHHhccCCCCceeEEEeecCCC---CCccEEEEEEEEcCCCeEEEccCCCCCH
Q 017551          249 YAAVKFADACLRGLRGDAGVVECAFVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNE  306 (369)
Q Consensus       249 ~a~~~li~ai~~~~~~~~~v~~~~~~~g~~---~~~~~~svPv~lg~~Gv~~~~~~~~L~~  306 (369)
                      ..++++|+||.+|++.  .....+.++|.+   |+|.+++|||+|+++|+.++.-.+.++.
T Consensus       153 e~a~~ii~ai~~~~~~--~~~vNv~N~G~I~nLp~davVEVpc~Vd~~Gi~P~~vg~~~p~  211 (278)
T d1vjta2         153 EQHIPFINAIANNKRV--RLFLNVENQGTLKDFPDDVVMELPVWVDCCGIHREKVEPDLTH  211 (278)
T ss_dssp             CSHHHHHHHHHHCCCE--EEEEEEECTTSSTTSCSSSEEEEEEEEETTEEEECCCCSCCCH
T ss_pred             HHHHHHHHHHhCCCCe--EEEEECCCCCcCCCCCchhheEeEEEEeCCceeeeecCCCChH
Confidence            4568999999999764  233335789987   8999999999999999999764223444

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.97  E-value=0.00041  Score=57.31  Aligned_cols=44  Identities=20%  Similarity=0.317  Sum_probs=35.6

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhc
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISH   66 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~   66 (369)
                      |||+||||+|.+|+++|..|+..|.  +|+++++++  +...+.++..
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~--~V~l~~R~~e~~~~l~~~i~~   46 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGH--EIVVGSRREEKAEAKAAEYRR   46 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTC--EEEEEESSHHHHHHHHHHHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHh
Confidence            7999996669999999999999999  999999987  3333344443

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=96.92  E-value=0.01  Score=52.26  Aligned_cols=113  Identities=22%  Similarity=0.342  Sum_probs=72.5

Q ss_pred             CEE-EEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCCh----------hhhc
Q 017551           21 FKV-AILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------ENAL   86 (369)
Q Consensus        21 ~KI-~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl----------~~al   86 (369)
                      +|| .|+||++++|..++..|+..|.  .|++.|+++  ++..+.++.+..  .++..+. .-+|.          .+.+
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga--~V~~~~r~~~~l~~~~~~i~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGF--AVAIADYNDATAKAVASEINQAG--GHAVAVKVDVSDRDQVFAAVEQARKTL   76 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHHHh
Confidence            376 6779999999999999999998  999999987  333444554422  2333322 11221          2335


Q ss_pred             CCCcEEEEcCCCCCC-C--CCCH---HHHHHHHH----HHHHHHHHHHhhhCCCeEEEEec
Q 017551           87 TGMDLVIIPAGVPRK-P--GMTR---DDLFNINA----GIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        87 ~~ADiVii~ag~p~k-~--g~~r---~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      -.-|++|..||.... +  .++.   ...+..|+    ...+...+.+.+....+.|+++|
T Consensus        77 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~is  137 (255)
T d1gega_          77 GGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINAC  137 (255)
T ss_dssp             TCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEEC
T ss_pred             CCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhcccccccccc
Confidence            689999999987432 2  1232   33455554    44456666677777778777775

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=96.86  E-value=0.0065  Score=55.43  Aligned_cols=104  Identities=14%  Similarity=0.121  Sum_probs=62.5

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCC-CC----hhhhcCCCcEEE
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ-PQ----LENALTGMDLVI   93 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t-~d----l~~al~~ADiVi   93 (369)
                      ++++|+|+||+|++|++++..|+..++  +|+.+-.+........+..   ...++...+. .|    +..+++++|.++
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~--~V~~l~R~~~~~~~~~~~~---~~~v~~~~gD~~d~~~~~~~a~~~~~~~~   76 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGH--HVRAQVHSLKGLIAEELQA---IPNVTLFQGPLLNNVPLMDTLFEGAHLAF   76 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTC--CEEEEESCSCSHHHHHHHT---STTEEEEESCCTTCHHHHHHHHTTCSEEE
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCC--eEEEEECCcchhhhhhhcc---cCCCEEEEeeCCCcHHHHHHHhcCCceEE
Confidence            456999999999999999999999887  8888866542222222322   1233333221 22    446889999988


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           94 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        94 i~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      +.....   .       ..|....+.++.+..+.+-.-+++..|
T Consensus        77 ~~~~~~---~-------~~~~~~~~~~~~aa~~agv~~~v~~Ss  110 (350)
T d1xgka_          77 INTTSQ---A-------GDEIAIGKDLADAAKRAGTIQHYIYSS  110 (350)
T ss_dssp             ECCCST---T-------SCHHHHHHHHHHHHHHHSCCSEEEEEE
T ss_pred             eecccc---c-------chhhhhhhHHHHHHHHhCCCceEEEee
Confidence            864221   1       123344455666666665334444444

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.84  E-value=0.002  Score=52.26  Aligned_cols=54  Identities=22%  Similarity=0.351  Sum_probs=43.1

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      ..+||+|||+.|.||+.++..|...++  +|.+||++...                      +.++.+.++|+++...
T Consensus         8 ~~~kI~iIGg~G~mG~~la~~L~~~G~--~V~~~d~~~~~----------------------~~~~~~~~~~~v~~~~   61 (152)
T d2pv7a2           8 DIHKIVIVGGYGKLGGLFARYLRASGY--PISILDREDWA----------------------VAESILANADVVIVSV   61 (152)
T ss_dssp             TCCCEEEETTTSHHHHHHHHHHHTTTC--CEEEECTTCGG----------------------GHHHHHTTCSEEEECS
T ss_pred             CCCeEEEEcCCCHHHHHHHHHHHHcCC--CcEeccccccc----------------------ccchhhhhcccccccc
Confidence            346999999449999999999999999  99999986521                      1235678899998874

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.83  E-value=0.0012  Score=55.24  Aligned_cols=79  Identities=22%  Similarity=0.257  Sum_probs=55.2

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP   95 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~   95 (369)
                      ..++-||+|+|| |.+|..-+...+..+-  ++..+|.+. ......+....  ..... ......+++++++||+||-+
T Consensus        29 gv~pa~V~ViGa-GvaG~~A~~~A~~lGA--~V~~~D~~~~~l~~l~~~~~~--~~~~~-~~~~~~l~~~~~~aDivI~a  102 (168)
T d1pjca1          29 GVKPGKVVILGG-GVVGTEAAKMAVGLGA--QVQIFDINVERLSYLETLFGS--RVELL-YSNSAEIETAVAEADLLIGA  102 (168)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHGG--GSEEE-ECCHHHHHHHHHTCSEEEEC
T ss_pred             CCCCcEEEEECC-ChHHHHHHHHHhhCCC--EEEEEeCcHHHHHHHHHhhcc--cceee-hhhhhhHHHhhccCcEEEEe
Confidence            567889999999 9999999888887776  999999987 22222222111  11222 22234578899999999999


Q ss_pred             CCCCCC
Q 017551           96 AGVPRK  101 (369)
Q Consensus        96 ag~p~k  101 (369)
                      +-+|-+
T Consensus       103 alipG~  108 (168)
T d1pjca1         103 VLVPGR  108 (168)
T ss_dssp             CCCTTS
T ss_pred             eecCCc
Confidence            877643

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=96.82  E-value=0.00078  Score=59.29  Aligned_cols=77  Identities=19%  Similarity=0.173  Sum_probs=50.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch----hHHHHhhcccCCCeEEEEeC----CCChhhhcCCCcE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP----GVTADISHMDTGAVVRGFLG----QPQLENALTGMDL   91 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~----g~~~dL~~~~~~~~v~~~~~----t~dl~~al~~ADi   91 (369)
                      ++||.|+||+|++|++++..|...|.  +|+.++.+...    .....+.+.. ...+....+    ..+..++++++|.
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~   79 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGH--PTFLLVRESTASSNSEKAQLLESFK-ASGANIVHGSIDDHASLVEAVKNVDV   79 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC--CEEEECCCCCTTTTHHHHHHHHHHH-TTTCEEECCCTTCHHHHHHHHHTCSE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEECCCccccchhHHHHHHhhc-cCCcEEEEeecccchhhhhhhhhcee
Confidence            35999999999999999999999987  99999987611    1111122111 122222211    1234567899999


Q ss_pred             EEEcCCCC
Q 017551           92 VIIPAGVP   99 (369)
Q Consensus        92 Vii~ag~p   99 (369)
                      |+..++..
T Consensus        80 vi~~~~~~   87 (307)
T d1qyca_          80 VISTVGSL   87 (307)
T ss_dssp             EEECCCGG
T ss_pred             eeeccccc
Confidence            99887543

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.81  E-value=0.00042  Score=57.04  Aligned_cols=71  Identities=17%  Similarity=0.107  Sum_probs=47.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCC---CChhhhcCCCcEEEEcC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ---PQLENALTGMDLVIIPA   96 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t---~dl~~al~~ADiVii~a   96 (369)
                      .+||.|+|| |.+|++++..|..+++  +|+++|++..+  +.++..... .........   ..+.+.+...|+++...
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~--~V~v~dr~~~~--a~~l~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~i~~~   75 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGI--KVTVACRTLES--AKKLSAGVQ-HSTPISLDVNDDAALDAEVAKHDLVISLI   75 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTC--EEEEEESCHHH--HHHHHTTCT-TEEEEECCTTCHHHHHHHHTTSSEEEECS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEECChHH--HHHHHhccc-ccccccccccchhhhHhhhhccceeEeec
Confidence            359999999 9999999999999998  99999998632  233333221 111111111   23446678899888763

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.78  E-value=0.013  Score=51.60  Aligned_cols=114  Identities=15%  Similarity=0.206  Sum_probs=69.5

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCCh----------hhh
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------ENA   85 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl----------~~a   85 (369)
                      +.+.+.|+||+++||..++..|+..|.  .|++.|++.  ....+.++.... ..++..+. .-+|.          .+.
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga--~V~i~~r~~~~~~~~~~~l~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGC--SVVVASRNLEEASEAAQKLTEKY-GVETMAFRCDVSNYEEVKKLLEAVKEK   80 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHHh-CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            346888999999999999999999998  999999986  233334444322 22333221 11221          123


Q ss_pred             cCCCcEEEEcCCCCCC-C--CCCH---HHHHHHHH----HHHHHHHHHHhhhCCCeEEEEe
Q 017551           86 LTGMDLVIIPAGVPRK-P--GMTR---DDLFNINA----GIVRTLCEGIAKCCPNATVNLI  136 (369)
Q Consensus        86 l~~ADiVii~ag~p~k-~--g~~r---~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~  136 (369)
                      +..-|++|..||.... +  ..+.   ...+..|+    .+.+.+++.+.+.. .+.+|++
T Consensus        81 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~i  140 (251)
T d1vl8a_          81 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINI  140 (251)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEE
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccc-ccccccc
Confidence            4579999999987532 2  1232   33445554    45555566665443 4445555

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.76  E-value=0.00094  Score=50.09  Aligned_cols=73  Identities=19%  Similarity=0.270  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      +.+||+|+|. |..|.+++..|..++.  ++.++|.+.......++.+   ...+..  +..+ ...+.+.|+||++-|+
T Consensus         4 ~~K~v~ViGl-G~sG~s~a~~L~~~g~--~v~~~D~~~~~~~~~~~~~---~~~~~~--~~~~-~~~~~~~d~vi~SPGi   74 (93)
T d2jfga1           4 QGKNVVIIGL-GLTGLSCVDFFLARGV--TPRVMDTRMTPPGLDKLPE---AVERHT--GSLN-DEWLMAADLIVASPGI   74 (93)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTC--CCEEEESSSSCTTGGGSCT---TSCEEE--SBCC-HHHHHHCSEEEECTTS
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHHCCC--EEEEeeCCcCchhHHHHhh---ccceee--cccc-hhhhccCCEEEECCCC
Confidence            3458999999 9999999999999987  8999998662111111222   122222  2222 4568899999999888


Q ss_pred             CC
Q 017551           99 PR  100 (369)
Q Consensus        99 p~  100 (369)
                      |.
T Consensus        75 ~~   76 (93)
T d2jfga1          75 AL   76 (93)
T ss_dssp             CT
T ss_pred             CC
Confidence            75

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=96.71  E-value=0.01  Score=52.43  Aligned_cols=111  Identities=18%  Similarity=0.242  Sum_probs=70.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCCh----------hhhc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------ENAL   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl----------~~al   86 (369)
                      .+.+.|+||+++||..++..|+..|.  +|++.|++.  +...+.++..     ++..+. .-+|.          .+.+
T Consensus         5 gK~alVTGas~GIG~aia~~la~~Ga--~V~~~~r~~~~l~~~~~~~~~-----~~~~~~~Dvt~~~~v~~~~~~~~~~~   77 (256)
T d1k2wa_           5 GKTALITGSARGIGRAFAEAYVREGA--RVAIADINLEAARATAAEIGP-----AACAIALDVTDQASIDRCVAELLDRW   77 (256)
T ss_dssp             TEEEEEETCSSHHHHHHHHHHHHTTE--EEEEEESCHHHHHHHHHHHCT-----TEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhCC-----ceEEEEeeCCCHHHHHHHHHHHHHHh
Confidence            35788999999999999999999997  999999986  3333444421     222211 11221          1233


Q ss_pred             CCCcEEEEcCCCCC-CC--CCC---HHHHHHHHH----HHHHHHHHHHhhhCCCeEEEEec
Q 017551           87 TGMDLVIIPAGVPR-KP--GMT---RDDLFNINA----GIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        87 ~~ADiVii~ag~p~-k~--g~~---r~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      -.-|++|..||... .+  ..+   ....+..|+    .+.+.+++.+.+....+.|+++|
T Consensus        78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~is  138 (256)
T d1k2wa_          78 GSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMA  138 (256)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEEC
T ss_pred             CCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCcccccc
Confidence            57899999998653 22  123   234455664    44555666666666567777775

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=96.70  E-value=0.0032  Score=56.49  Aligned_cols=96  Identities=14%  Similarity=0.083  Sum_probs=63.1

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhh--cCCCcEEEEcCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENA--LTGMDLVIIPAGV   98 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~a--l~~ADiVii~ag~   98 (369)
                      +||.|+||+|++|++++..|.+++.  ++++.|....    .|+.+..            ...+.  ..+.|+|+..++.
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~--~vi~~~~~~~----~~~~~~~------------~~~~~~~~~~~d~v~~~a~~   64 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGD--VELVLRTRDE----LNLLDSR------------AVHDFFASERIDQVYLAAAK   64 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTT--EEEECCCTTT----CCTTCHH------------HHHHHHHHHCCSEEEECCCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcC--EEEEecCchh----ccccCHH------------HHHHHHhhcCCCEEEEcchh
Confidence            4999999999999999999999887  6666665431    1111110            01111  2357888888754


Q ss_pred             CCCC---CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEE
Q 017551           99 PRKP---GMTRDDLFNINAGIVRTLCEGIAKCCPNATVN  134 (369)
Q Consensus        99 p~k~---g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~vi  134 (369)
                      .-..   .....+++..|+.....+.+.+.++.-.-+|.
T Consensus        65 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~  103 (315)
T d1e6ua_          65 VGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLF  103 (315)
T ss_dssp             CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             ccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence            3211   12345667889999999999998886554443

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.69  E-value=0.0017  Score=56.92  Aligned_cols=112  Identities=17%  Similarity=0.169  Sum_probs=68.3

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      +.+++.|+||+++||..++..|++.|.  +|++.|+++..  ..+..+.....+++.  .-....+.+..-|++|..||.
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga--~V~~~~r~~~~--l~~~~~~~~~~Dv~~--~~~~~~~~~g~iD~lVnnAG~   76 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGA--EVTICARNEEL--LKRSGHRYVVCDLRK--DLDLLFEKVKEVDILVLNAGG   76 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHH--HHHTCSEEEECCTTT--CHHHHHHHSCCCSEEEECCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHH--HHhcCCcEEEcchHH--HHHHHHHHhCCCcEEEecccc
Confidence            456899999999999999999999998  99999998521  111111100011100  001234667899999999997


Q ss_pred             CCCCC---CCH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEec
Q 017551           99 PRKPG---MTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        99 p~k~g---~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      +....   .+.   ...+..|+.    +.+.+.+.+.+. ..+.+++++
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-~~G~ii~i~  124 (234)
T d1o5ia_          77 PKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK-GWGRIVAIT  124 (234)
T ss_dssp             CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEC
T ss_pred             cCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccc-ccccccccc
Confidence            65321   232   233444543    556666666654 345555554

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=96.68  E-value=0.0024  Score=56.53  Aligned_cols=114  Identities=17%  Similarity=0.135  Sum_probs=71.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCCh----------hhhc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------ENAL   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl----------~~al   86 (369)
                      .+.+.|+||+++||..++..|+..|.  .|++.|++.  ++..+.++..   ..++..+. .-+|.          .+.+
T Consensus         6 gK~alVTGas~GIG~aia~~la~~Ga--~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (251)
T d1zk4a1           6 GKVAIITGGTLGIGLAIATKFVEEGA--KVMITGRHSDVGEKAAKSVGT---PDQIQFFQHDSSDEDGWTKLFDATEKAF   80 (251)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhCC---CCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            35788889999999999999999998  999999986  2323333332   22333332 11221          2334


Q ss_pred             CCCcEEEEcCCCCC-CC--CCCH---HHHHHHHH----HHHHHHHHHHhhhCCCeEEEEecC
Q 017551           87 TGMDLVIIPAGVPR-KP--GMTR---DDLFNINA----GIVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        87 ~~ADiVii~ag~p~-k~--g~~r---~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      -.-|++|..||... ++  .++.   ...+..|+    ...+..++.+.+....+.|++++-
T Consensus        81 G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS  142 (251)
T d1zk4a1          81 GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSS  142 (251)
T ss_dssp             SSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECC
T ss_pred             CCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeec
Confidence            67899999988643 22  2333   23445554    456666677766655667777764

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.67  E-value=0.0015  Score=59.31  Aligned_cols=104  Identities=15%  Similarity=0.017  Sum_probs=62.2

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC----chh---HHHHhhcccCCCeEEEEeC-CCCh---hhhc--C
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN----TPG---VTADISHMDTGAVVRGFLG-QPQL---ENAL--T   87 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~----~~g---~~~dL~~~~~~~~v~~~~~-t~dl---~~al--~   87 (369)
                      +|+.|+||+|++|++++..|+++|+  +|+.+|...    ...   ...+.... ....++.+.+ .++.   ..++  .
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Di~~~~~~~~~~~~~   78 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGY--EVHGLIRRSSNFNTQRINHIYIDPHNV-NKALMKLHYADLTDASSLRRWIDVI   78 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCCSSCCCTTTTTTC---------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcC--EEEEEECCCcccchhhhhhhhhhhhhc-cccceEEEEccccCHHHHHHHHhhh
Confidence            4899999999999999999999998  999999743    111   11111111 1233443321 1232   2223  4


Q ss_pred             CCcEEEEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhh
Q 017551           88 GMDLVIIPAGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKC  127 (369)
Q Consensus        88 ~ADiVii~ag~p~k~g--~~r~~~~~~N~~i~~~i~~~i~~~  127 (369)
                      +.|+|+..|+.+....  .........|......+...+.+.
T Consensus        79 ~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~  120 (339)
T d1n7ha_          79 KPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH  120 (339)
T ss_dssp             CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             ccchhhhccccccccccccCccccccccccccchhhhhhhhc
Confidence            6799999987653221  233455667776676666666543

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=96.66  E-value=0.004  Score=54.87  Aligned_cols=106  Identities=8%  Similarity=0.051  Sum_probs=67.0

Q ss_pred             EEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC-CC--ChhhhcCCCcEEEEcCCCC
Q 017551           23 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QP--QLENALTGMDLVIIPAGVP   99 (369)
Q Consensus        23 I~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~-t~--dl~~al~~ADiVii~ag~p   99 (369)
                      |.|+||+|+||++++..|+++|. .+|+.+|..........+.+... ........ ..  .....+.++++|+..|+..
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~-~~V~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~aa~~   79 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGI-TDILVVDNLKDGTKFVNLVDLNI-ADYMDKEDFLIQIMAGEEFGDVEAIFHEGACS   79 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTC-CCEEEEECCSSGGGGHHHHTSCC-SEEEEHHHHHHHHHTTCCCSSCCEEEECCSCC
T ss_pred             EEEecCccHHHHHHHHHHHhCCC-CeEEEEECCCCcchhhcccccch-hhhccchHHHHHHhhhhcccchhhhhhhcccc
Confidence            78999999999999999999873 37888884331111111222111 11111000 00  0013457889999998877


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCC
Q 017551          100 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPN  130 (369)
Q Consensus       100 ~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~  130 (369)
                      ..+..........|......+.+.....+..
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  110 (307)
T d1eq2a_          80 STTEWDGKYMMDNNYQYSKELLHYCLEREIP  110 (307)
T ss_dssp             CTTCCCHHHHHHHTHHHHHHHHHHHHHHTCC
T ss_pred             ccccccccccccccccccccccccccccccc
Confidence            6666667777777888888888888877644

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=96.58  E-value=0.018  Score=50.83  Aligned_cols=114  Identities=19%  Similarity=0.187  Sum_probs=69.3

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCCh----------hhhcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------ENALT   87 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl----------~~al~   87 (369)
                      +.+.|+||+++||..++..|+..|.  +|++.|++.  +.....++.......++..+. .-+|.          .+.+-
T Consensus         5 K~alITGas~GIG~aia~~la~~Ga--~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   82 (258)
T d1iy8a_           5 RVVLITGGGSGLGRATAVRLAAEGA--KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   82 (258)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence            4788889999999999999999998  999999987  233333343322223333321 11232          12346


Q ss_pred             CCcEEEEcCCCCC--CC--CCCH---HHHHHHHH----HHHHHHHHHHhhhCCCeEEEEec
Q 017551           88 GMDLVIIPAGVPR--KP--GMTR---DDLFNINA----GIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        88 ~ADiVii~ag~p~--k~--g~~r---~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      .-|++|..||...  .+  .++.   ...+..|+    ...+.+.+.+.+.. .+.||+++
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~is  142 (258)
T d1iy8a_          83 RIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTA  142 (258)
T ss_dssp             CCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEEC
T ss_pred             CCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhc-CCCCcccc
Confidence            7999999998632  22  2332   33455554    44455555555544 55566664

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=96.58  E-value=0.011  Score=52.39  Aligned_cols=113  Identities=16%  Similarity=0.257  Sum_probs=71.0

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeC-CCCh----------hhhc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQL----------ENAL   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~-t~dl----------~~al   86 (369)
                      .+.+.|+||+++||..++..|+..|.  .|++.|+++  +.....++...  ..++..+.. -+|.          .+.+
T Consensus         5 gK~alITGas~GIG~aia~~la~~Ga--~V~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (260)
T d1zema1           5 GKVCLVTGAGGNIGLATALRLAEEGT--AIALLDMNREALEKAEASVREK--GVEARSYVCDVTSEEAVIGTVDSVVRDF   80 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTT--TSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            45788999999999999999999998  999999986  33344445432  233333321 1221          2334


Q ss_pred             CCCcEEEEcCCCCCC--C--CCCH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEec
Q 017551           87 TGMDLVIIPAGVPRK--P--GMTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        87 ~~ADiVii~ag~p~k--~--g~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      -.-|++|..+|....  +  .++.   ...+..|+.    ..+.+.+.+.+. ..+.||+++
T Consensus        81 g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~-~~G~II~is  141 (260)
T d1zema1          81 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQ-NYGRIVNTA  141 (260)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEC
T ss_pred             CCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhh-cCCCCCeee
Confidence            689999999986432  2  1232   334455544    455555555544 467777775

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.58  E-value=0.02  Score=50.33  Aligned_cols=114  Identities=17%  Similarity=0.125  Sum_probs=72.4

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCChh----------hhc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQLE----------NAL   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl~----------~al   86 (369)
                      .+.+.|+||++++|..++..|+..|.  +|++.|++.  ......++.......++..+. .-+|.+          +.+
T Consensus         3 GKvalITGas~GIG~aia~~la~~Ga--~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           3 GKVALVTGAAQGIGRAFAEALLLKGA--KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            45778889999999999999999998  999999987  233344454332122333322 122321          234


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHH----HHHHHHHHHHhhhC--CCeEEEEec
Q 017551           87 TGMDLVIIPAGVPRKPGMTRDDLFNINA----GIVRTLCEGIAKCC--PNATVNLIS  137 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~g~~r~~~~~~N~----~i~~~i~~~i~~~~--p~a~viv~t  137 (369)
                      -.-|++|..||....  .+..+.+..|+    ...+...+.+.+..  ..+.|++++
T Consensus        81 G~iDilVnnAg~~~~--~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~is  135 (254)
T d2gdza1          81 GRLDILVNNAGVNNE--KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMS  135 (254)
T ss_dssp             SCCCEEEECCCCCCS--SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEEC
T ss_pred             CCcCeeccccccccc--ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeec
Confidence            578999999987643  23444555554    45566666665543  346677775

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=96.51  E-value=0.0022  Score=54.40  Aligned_cols=94  Identities=18%  Similarity=0.201  Sum_probs=61.6

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      +.++|+|+|. |.||..++..+..-+.  +|..+|.... .....+..       +..   ..++++.+++||+|++...
T Consensus        43 ~~~~vgiiG~-G~IG~~va~~l~~fg~--~v~~~d~~~~~~~~~~~~~-------~~~---~~~l~~~l~~sD~v~~~~p  109 (188)
T d2naca1          43 EAMHVGTVAA-GRIGLAVLRRLAPFDV--HLHYTDRHRLPESVEKELN-------LTW---HATREDMYPVCDVVTLNCP  109 (188)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTC--EEEEECSSCCCHHHHHHHT-------CEE---CSSHHHHGGGCSEEEECSC
T ss_pred             cccceeeccc-cccchhhhhhhhccCc--eEEEEeecccccccccccc-------ccc---cCCHHHHHHhccchhhccc
Confidence            4579999999 9999999999987666  9999998652 22222111       111   3567899999999999742


Q ss_pred             C-CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC
Q 017551           98 V-PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP  139 (369)
Q Consensus        98 ~-p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP  139 (369)
                      . +...++-..              +.+....+++++||++--
T Consensus       110 lt~~T~~li~~--------------~~l~~mk~ga~lIN~aRG  138 (188)
T d2naca1         110 LHPETEHMIND--------------ETLKLFKRGAYIVNTARG  138 (188)
T ss_dssp             CCTTTTTCBSH--------------HHHTTSCTTEEEEECSCG
T ss_pred             ccccchhhhHH--------------HHHHhCCCCCEEEecCch
Confidence            2 211122111              233444578999998743

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=96.51  E-value=0.0011  Score=56.18  Aligned_cols=77  Identities=14%  Similarity=0.223  Sum_probs=46.4

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhH-HHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV-TADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP   95 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~-~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~   95 (369)
                      +.+++||+|+||+|.+|+-+..+|..+|.+ ||..+--+...|. ..+..............  ....+.++++|+|+.+
T Consensus         2 s~~kikVaIlGATGyvG~elirLL~~HP~~-ei~~l~S~~~aG~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dvvf~a   78 (183)
T d2cvoa1           2 SGEEVRIAVLGASGYTGAEIVRLLANHPQF-RIKVMTADRKAGEQFGSVFPHLITQDLPNLV--AVKDADFSNVDAVFCC   78 (183)
T ss_dssp             CSSCEEEEEESCSSHHHHHHHHHHTTCSSE-EEEEEECSTTTTSCHHHHCGGGTTSCCCCCB--CGGGCCGGGCSEEEEC
T ss_pred             CCCccEEEEECcccHHHHHHHHHHHhCCCc-eEEEEeccccCCCccccccccccccccccch--hhhhhhhcccceeeec
Confidence            356789999999999999999999999865 5666654442222 12221111111111111  1123456899999987


Q ss_pred             C
Q 017551           96 A   96 (369)
Q Consensus        96 a   96 (369)
                      .
T Consensus        79 l   79 (183)
T d2cvoa1          79 L   79 (183)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=96.51  E-value=0.024  Score=49.93  Aligned_cols=115  Identities=16%  Similarity=0.217  Sum_probs=71.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCCh----------hhhc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------ENAL   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl----------~~al   86 (369)
                      .+.+.|+||+++||..++..|++.|.  +|++.|++.  +...+.++.... ..++..+. .-+|.          .+.+
T Consensus         9 gK~alITGas~GIG~aia~~la~~Ga--~V~i~~r~~~~~~~~~~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (260)
T d1h5qa_           9 NKTIIVTGGNRGIGLAFTRAVAAAGA--NVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDVSNTDIVTKTIQQIDADL   85 (260)
T ss_dssp             TEEEEEETTTSHHHHHHHHHHHHTTE--EEEEEESSCTTHHHHHHHHHHHH-TCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHHh-CCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            45788899999999999999999998  999999987  223333343221 12333222 11222          2334


Q ss_pred             CCCcEEEEcCCCCC-CC--CCCH---HHHHHHHH----HHHHHHHHHHhhhCCCeEEEEec
Q 017551           87 TGMDLVIIPAGVPR-KP--GMTR---DDLFNINA----GIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        87 ~~ADiVii~ag~p~-k~--g~~r---~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      -.-|++|..||... ++  ..+.   ...+..|+    ...+.+++.+.+....+.+++.+
T Consensus        86 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~  146 (260)
T d1h5qa_          86 GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTS  146 (260)
T ss_dssp             CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEEC
T ss_pred             CCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEee
Confidence            68999999988643 22  1232   33445554    45566677776666677666654

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=96.50  E-value=0.0083  Score=53.29  Aligned_cols=112  Identities=17%  Similarity=0.227  Sum_probs=68.4

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hh-------hhc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LE-------NAL   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~-------~al   86 (369)
                      .+.+.|+||+++||..++..|+..|.  +|++.|+++  ++..+.++...   ..+..+. .-+|   .+       +.+
T Consensus         6 gKvalITGas~GIG~aia~~la~~Ga--~V~i~~r~~~~~~~~~~~l~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (268)
T d2bgka1           6 DKVAIITGGAGGIGETTAKLFVRYGA--KVVIADIADDHGQKVCNNIGSP---DVISFVHCDVTKDEDVRNLVDTTIAKH   80 (268)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHCCT---TTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhcCC---CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            35788889999999999999999998  999999987  33344445432   1222221 1122   11       234


Q ss_pred             CCCcEEEEcCCCCC-CC----CCCH---HHHHHHHH----HHHHHHHHHHhhhCCCeEEEEec
Q 017551           87 TGMDLVIIPAGVPR-KP----GMTR---DDLFNINA----GIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        87 ~~ADiVii~ag~p~-k~----g~~r---~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ...|++|..||... .+    .++.   ...+..|+    -..+.+.+.+.+.. .+.+++++
T Consensus        81 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~ii~is  142 (268)
T d2bgka1          81 GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTA  142 (268)
T ss_dssp             SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEEC
T ss_pred             CCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcC-CCCccccc
Confidence            57899999998632 22    2232   33445554    44555566665543 45566654

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.49  E-value=0.0022  Score=56.65  Aligned_cols=112  Identities=16%  Similarity=0.237  Sum_probs=68.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCCh----------hhhc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------ENAL   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl----------~~al   86 (369)
                      .+.+.|+||+++||..++..|+..|.  +|++.|+++  ++....++...     ...+. .-+|.          .+.+
T Consensus         6 gK~alITGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~Dv~~~~~v~~~~~~~~~~~   78 (244)
T d1nffa_           6 GKVALVSGGARGMGASHVRAMVAEGA--KVVFGDILDEEGKAMAAELADA-----ARYVHLDVTQPAQWKAAVDTAVTAF   78 (244)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHTGGG-----EEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhhCc-----ceEEEeecCCHHHHHHHHHHHHHHh
Confidence            35778889999999999999999998  999999987  33344444321     11111 11121          2334


Q ss_pred             CCCcEEEEcCCCCCC-C--CCC---HHHHHHHHH----HHHHHHHHHHhhhCCCeEEEEecCC
Q 017551           87 TGMDLVIIPAGVPRK-P--GMT---RDDLFNINA----GIVRTLCEGIAKCCPNATVNLISNP  139 (369)
Q Consensus        87 ~~ADiVii~ag~p~k-~--g~~---r~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~tNP  139 (369)
                      ..-|++|..||.... +  .++   ....+..|+    .+.+.+.+.+.+. +.+.||+++-.
T Consensus        79 g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~Ii~isS~  140 (244)
T d1nffa_          79 GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA-GRGSIINISSI  140 (244)
T ss_dssp             SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG
T ss_pred             CCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhc-CcceEEecccc
Confidence            678999999986432 2  223   233455554    3444555555544 46777777543

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.44  E-value=0.0021  Score=55.05  Aligned_cols=94  Identities=20%  Similarity=0.278  Sum_probs=61.7

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      +.++|+|||. |.||+.++..+..-+.  ++..||............       +..   ..++++.++.||+|++....
T Consensus        48 ~gktvgIiG~-G~IG~~va~~l~~fg~--~v~~~d~~~~~~~~~~~~-------~~~---~~~l~~ll~~sD~i~~~~pl  114 (193)
T d1mx3a1          48 RGETLGIIGL-GRVGQAVALRAKAFGF--NVLFYDPYLSDGVERALG-------LQR---VSTLQDLLFHSDCVTLHCGL  114 (193)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTC--EEEEECTTSCTTHHHHHT-------CEE---CSSHHHHHHHCSEEEECCCC
T ss_pred             eCceEEEecc-ccccccceeeeecccc--ceeeccCcccccchhhhc-------ccc---ccchhhccccCCEEEEeecc
Confidence            4579999999 9999999999986666  999999865322211111       111   35688899999999998422


Q ss_pred             -CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC
Q 017551           99 -PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP  139 (369)
Q Consensus        99 -p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP  139 (369)
                       +...++-       |.       +.+...-|++++||++=-
T Consensus       115 t~~T~~li-------~~-------~~l~~mk~~a~lIN~sRG  142 (193)
T d1mx3a1         115 NEHNHHLI-------ND-------FTVKQMRQGAFLVNTARG  142 (193)
T ss_dssp             CTTCTTSB-------SH-------HHHTTSCTTEEEEECSCT
T ss_pred             cccchhhh-------hH-------HHHhccCCCCeEEecCCc
Confidence             2222221       11       223344588999998743

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.41  E-value=0.00093  Score=54.54  Aligned_cols=70  Identities=21%  Similarity=0.318  Sum_probs=45.5

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCC-CCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~-~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      +|||+|+||+|.+|+-+...|.+.+ ...+|.++--....|...  ..  ....+....  .+ .+.+.++|+++.+.
T Consensus         2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i--~~--~~~~~~~~~--~~-~~~~~~~d~vf~a~   72 (144)
T d2hjsa1           2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRM--GF--AESSLRVGD--VD-SFDFSSVGLAFFAA   72 (144)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEE--EE--TTEEEECEE--GG-GCCGGGCSEEEECS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcce--ee--ccccchhcc--ch-hhhhccceEEEecC
Confidence            6899999999999999999887543 345888876654323211  11  122333221  12 35678999999875

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.40  E-value=0.033  Score=48.71  Aligned_cols=118  Identities=21%  Similarity=0.276  Sum_probs=75.3

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCChh----------hhc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQLE----------NAL   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl~----------~al   86 (369)
                      .+-+.|+||++++|..++..|++.|.  .|++.|++.  +...+.++...  +.++..+. .-+|.+          +.+
T Consensus         7 Gkv~lITGas~GIG~~ia~~la~~G~--~V~l~~r~~~~l~~~~~~~~~~--~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   82 (244)
T d1yb1a_           7 GEIVLITGAGHGIGRLTAYEFAKLKS--KLVLWDINKHGLEETAAKCKGL--GAKVHTFVVDCSNREDIYSSAKKVKAEI   82 (244)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            35677889999999999999999998  999999987  33444445432  23433332 223322          245


Q ss_pred             CCCcEEEEcCCCCCCCC--CC----HHHHHHHH----HHHHHHHHHHHhhhCCCeEEEEecCCCCC
Q 017551           87 TGMDLVIIPAGVPRKPG--MT----RDDLFNIN----AGIVRTLCEGIAKCCPNATVNLISNPVNS  142 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~g--~~----r~~~~~~N----~~i~~~i~~~i~~~~p~a~viv~tNPv~~  142 (369)
                      -.-|++|..||......  ..    ..+.+..|    ....+.+.+.+.+. ..+.|++++-....
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~G~Iv~isS~~~~  147 (244)
T d1yb1a_          83 GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN-NHGHIVTVASAAGH  147 (244)
T ss_dssp             CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCCC-C
T ss_pred             CCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhc-CCceEEEeecchhc
Confidence            67999999998754322  11    22344444    45566667777655 46778877766554

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=96.34  E-value=0.029  Score=49.52  Aligned_cols=114  Identities=18%  Similarity=0.179  Sum_probs=71.4

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHhhcccCCCeEEEEe-CCCCh---h-------hh
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQL---E-------NA   85 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~---~~g~~~dL~~~~~~~~v~~~~-~t~dl---~-------~a   85 (369)
                      .+.+.|+||+++||..++..|+..|.  +|++.|.+.   ++..+.++...  ..++..+. .-+|.   +       +.
T Consensus         7 gK~alITGas~GIG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (261)
T d1geea_           7 GKVVVITGSSTGLGKSMAIRFATEKA--KVVVNYRSKEDEANSVLEEIKKV--GGEAIAVKGDVTVESDVINLVQSAIKE   82 (261)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCcHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            35788889999999999999999998  999999875   22333344332  23333321 11221   1       22


Q ss_pred             cCCCcEEEEcCCCCCC-C--CCCH---HHHHHHH----HHHHHHHHHHHhhhCCCeEEEEec
Q 017551           86 LTGMDLVIIPAGVPRK-P--GMTR---DDLFNIN----AGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        86 l~~ADiVii~ag~p~k-~--g~~r---~~~~~~N----~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      +..-|++|..||.... +  ..+.   ...+..|    ....+.+++.+.+......|+++|
T Consensus        83 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~is  144 (261)
T d1geea_          83 FGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMS  144 (261)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEEC
T ss_pred             hCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccc
Confidence            3578999999987542 2  1232   3345555    455666777777666566666665

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=96.30  E-value=0.0028  Score=55.84  Aligned_cols=110  Identities=15%  Similarity=0.257  Sum_probs=67.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCCh----------hhhc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------ENAL   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl----------~~al   86 (369)
                      .+.+.|+||++++|..++..|+..|.  .|++.|+++  ++..+.++..     +...+. .-+|.          .+.+
T Consensus         4 gK~alITGas~GIG~a~a~~l~~~G~--~Vv~~~r~~~~l~~~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (243)
T d1q7ba_           4 GKIALVTGASRGIGRAIAETLAARGA--KVIGTATSENGAQAISDYLGA-----NGKGLMLNVTDPASIESVLEKIRAEF   76 (243)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHGG-----GEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhCC-----CCcEEEEEecCHHHhhhhhhhhhccc
Confidence            34677789999999999999999998  999999986  3333333321     111111 11221          1334


Q ss_pred             CCCcEEEEcCCCCCCCC---CC---HHHHHHHHH----HHHHHHHHHHhhhCCCeEEEEec
Q 017551           87 TGMDLVIIPAGVPRKPG---MT---RDDLFNINA----GIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~g---~~---r~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      -.-|++|..||......   .+   ....+..|+    ...+.+.+.+.+. ..+.||++|
T Consensus        77 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~II~is  136 (243)
T d1q7ba_          77 GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKK-RHGRIITIG  136 (243)
T ss_dssp             CSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEC
T ss_pred             CCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHc-CCCEeeeec
Confidence            57999999998644321   22   233445554    4555666666554 357777775

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.30  E-value=0.022  Score=50.62  Aligned_cols=115  Identities=17%  Similarity=0.247  Sum_probs=70.0

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC-CCeEEEEeC-CCCh----------hhh
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLG-QPQL----------ENA   85 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~-~~~v~~~~~-t~dl----------~~a   85 (369)
                      .+.+.|+||+++||..++..|+..|.  .|++.|++.  +...+.++..... ..++..+.. -+|.          .+.
T Consensus         4 gK~alITGas~GIG~aia~~la~~Ga--~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (274)
T d1xhla_           4 GKSVIITGSSNGIGRSAAVIFAKEGA--QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK   81 (274)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999998  999999986  3344444544321 123433321 1221          123


Q ss_pred             cCCCcEEEEcCCCCCCCC-----CCH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEec
Q 017551           86 LTGMDLVIIPAGVPRKPG-----MTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        86 l~~ADiVii~ag~p~k~g-----~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      +-.-|++|..||.....+     ++.   ...+..|+.    ..+.+.+.+.+ ...+.+++.|
T Consensus        82 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~-~~~g~ii~~s  144 (274)
T d1xhla_          82 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIK-TKGEIVNVSS  144 (274)
T ss_dssp             HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-TTCEEEEECC
T ss_pred             cCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccc-cccccccchh
Confidence            357899999988643221     232   233445543    45555555554 3566666654

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.23  E-value=0.0051  Score=54.05  Aligned_cols=111  Identities=20%  Similarity=0.189  Sum_probs=64.5

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCCh-------hhhcCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQL-------ENALTGM   89 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~dl-------~~al~~A   89 (369)
                      .+++.|+||+++||..++..|+..|.  +|++.|+++.  +..+.++..    ..+.... ...+.       .+.+..-
T Consensus         5 gK~~lITGas~GIG~aia~~l~~~G~--~V~~~~r~~~~l~~~~~~~~~----~~~~~Dv~~~~~v~~~~~~~~~~~g~i   78 (242)
T d1ulsa_           5 DKAVLITGAAHGIGRATLELFAKEGA--RLVACDIEEGPLREAAEAVGA----HPVVMDVADPASVERGFAEALAHLGRL   78 (242)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHTTTC----EEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHcCC----eEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence            46889999999999999999999998  9999999862  222222211    0111100 00111       2334578


Q ss_pred             cEEEEcCCCCCCC---CCCH---HHHHHHHHHH----HHHHHHHHhhhCCCeEEEEec
Q 017551           90 DLVIIPAGVPRKP---GMTR---DDLFNINAGI----VRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        90 DiVii~ag~p~k~---g~~r---~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~t  137 (369)
                      |++|..||.....   ..+.   ...+..|+.-    .+.+.+.+.+. ..+.+++.+
T Consensus        79 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~~~i~~~s  135 (242)
T d1ulsa_          79 DGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREK-NPGSIVLTA  135 (242)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CCEEEEEEC
T ss_pred             eEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhcccccccc-ccceeeeec
Confidence            9999999875432   1332   3345556544    44455555443 344455543

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.23  E-value=0.039  Score=48.50  Aligned_cols=113  Identities=19%  Similarity=0.264  Sum_probs=70.6

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCCh----------hhhc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------ENAL   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl----------~~al   86 (369)
                      .+.+.|+||++++|..++..|+..|.  +|++.|++.  +...+.++...  ..++..+. .-+|.          .+.+
T Consensus        11 gK~alITGas~GIG~aia~~la~~Ga--~V~~~~r~~~~~~~~~~~l~~~--g~~~~~~~~Dvs~~~~~~~~~~~~~~~~   86 (255)
T d1fmca_          11 GKCAIITGAGAGIGKEIAITFATAGA--SVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFAISKL   86 (255)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHTTTC--EEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45888999999999999999999998  999999886  23333444432  12333222 12232          2334


Q ss_pred             CCCcEEEEcCCCCCC-C-CCCH---HHHHHHHH----HHHHHHHHHHhhhCCCeEEEEec
Q 017551           87 TGMDLVIIPAGVPRK-P-GMTR---DDLFNINA----GIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        87 ~~ADiVii~ag~p~k-~-g~~r---~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ..-|++|..||.... + .++.   ...+..|+    .+.+.+++.+.+.. .+.||+++
T Consensus        87 g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Ii~is  145 (255)
T d1fmca_          87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTIT  145 (255)
T ss_dssp             SSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEC
T ss_pred             CCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccc-cccccccc
Confidence            689999999987432 2 2333   23344553    45556666666664 45555554

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=96.23  E-value=0.0038  Score=51.58  Aligned_cols=106  Identities=18%  Similarity=0.208  Sum_probs=66.4

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      -+..||.|||| |.+|..++..|...+. .++.++.....++  .+|.... +.....   -+++.+++.++|+||.+.+
T Consensus        22 l~~~~ilviGa-G~~g~~v~~~L~~~g~-~~i~v~nRt~~ka--~~l~~~~-~~~~~~---~~~~~~~l~~~Divi~ats   93 (159)
T d1gpja2          22 LHDKTVLVVGA-GEMGKTVAKSLVDRGV-RAVLVANRTYERA--VELARDL-GGEAVR---FDELVDHLARSDVVVSATA   93 (159)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCC-SEEEEECSSHHHH--HHHHHHH-TCEECC---GGGHHHHHHTCSEEEECCS
T ss_pred             cccCeEEEECC-CHHHHHHHHHHHhcCC-cEEEEEcCcHHHH--HHHHHhh-hccccc---chhHHHHhccCCEEEEecC
Confidence            35569999999 9999999998888763 4899999865222  2222211 112221   3577889999999999866


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC--CCeEEEEecCCCCCh
Q 017551           98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCC--PNATVNLISNPVNST  143 (369)
Q Consensus        98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tNPv~~~  143 (369)
                      .|.. =.++        +.++   ..+.+..  ..-+++-.+.|-|+=
T Consensus        94 s~~~-ii~~--------~~i~---~~~~~r~~~~~~~iiDlavPr~vd  129 (159)
T d1gpja2          94 APHP-VIHV--------DDVR---EALRKRDRRSPILIIDIANPRDVE  129 (159)
T ss_dssp             SSSC-CBCH--------HHHH---HHHHHCSSCCCEEEEECCSSCSBC
T ss_pred             CCCc-cccH--------hhhH---HHHHhcccCCCeEEEeecCCCCcC
Confidence            5531 1111        1111   2333322  344788889998774

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=96.21  E-value=0.0085  Score=50.63  Aligned_cols=82  Identities=20%  Similarity=0.188  Sum_probs=52.0

Q ss_pred             CCCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHhhcccCC------CeEE---EE--------e
Q 017551           16 GGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTG------AVVR---GF--------L   77 (369)
Q Consensus        16 ~~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-~~g~~~dL~~~~~~------~~v~---~~--------~   77 (369)
                      ...++-||.|||| |.+|.+-+...+.-+-  .+..+|++. ......++......      ....   .+        .
T Consensus        25 g~V~pa~VvViGa-GvaG~~Aa~~A~~lGA--~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~  101 (183)
T d1l7da1          25 GTVPPARVLVFGV-GVAGLQAIATAKRLGA--VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFR  101 (183)
T ss_dssp             EEECCCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCSTTHHHHHHTTCEECCC-----------------------
T ss_pred             CCcCCcEEEEEcC-cHHHHHHHHHHHHcCC--EEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHH
Confidence            3566789999999 9999998888886665  999999987 33333333211100      0000   00        0


Q ss_pred             --CCCChhhhcCCCcEEEEcCCCCC
Q 017551           78 --GQPQLENALTGMDLVIIPAGVPR  100 (369)
Q Consensus        78 --~t~dl~~al~~ADiVii~ag~p~  100 (369)
                        -...+.+++++||+||.++-+|-
T Consensus       102 ~~~~~~l~~~l~~aDlVI~talipG  126 (183)
T d1l7da1         102 KKQAEAVLKELVKTDIAITTALIPG  126 (183)
T ss_dssp             CCHHHHHHHHHTTCSEEEECCCCTT
T ss_pred             HHHHHHHHHHHHhhhhheeeeecCC
Confidence              01124456899999999987664

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.20  E-value=0.023  Score=50.41  Aligned_cols=115  Identities=16%  Similarity=0.188  Sum_probs=70.5

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC-CCeEEEEeC-CCCh----------hhh
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLG-QPQL----------ENA   85 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~-~~~v~~~~~-t~dl----------~~a   85 (369)
                      .+.+.|+||+++||..++..|+..|.  +|++.|+++  +.....++..... ..++..+.. -+|.          .+.
T Consensus         5 gK~alVTGas~GIG~aia~~la~~Ga--~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~   82 (272)
T d1xkqa_           5 NKTVIITGSSNGIGRTTAILFAQEGA--NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   82 (272)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCcCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            35788889999999999999999998  999999987  3344445544321 233443321 1221          123


Q ss_pred             cCCCcEEEEcCCCCCCC--C-----CC---HHHHHHHHHH----HHHHHHHHHhhhCCCeEEEEec
Q 017551           86 LTGMDLVIIPAGVPRKP--G-----MT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        86 l~~ADiVii~ag~p~k~--g-----~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      +-.-|++|..||.....  .     ++   ....+..|+.    ..+.+.+.+.+. ...+|++.|
T Consensus        83 ~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~-~g~iI~~~S  147 (272)
T d1xkqa_          83 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS-KGEIVNVSS  147 (272)
T ss_dssp             HSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECC
T ss_pred             hCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhccccccc-CCccccccc
Confidence            45789999999875421  1     22   2233455543    555566666543 455555554

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.19  E-value=0.062  Score=46.96  Aligned_cols=112  Identities=17%  Similarity=0.231  Sum_probs=70.0

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCCh----------hhhcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------ENALT   87 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl----------~~al~   87 (369)
                      +.+.|+||+++||..++..|+..|.  +|+++|+++  +...+.++....  .++..+. .-+|.          .+.+.
T Consensus        11 KvalITGas~GIG~a~a~~la~~Ga--~V~~~~r~~~~l~~~~~~l~~~g--~~~~~~~~Dvt~~~~v~~~~~~~~~~~g   86 (251)
T d2c07a1          11 KVALVTGAGRGIGREIAKMLAKSVS--HVICISRTQKSCDSVVDEIKSFG--YESSGYAGDVSKKEEISEVINKILTEHK   86 (251)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTTSS--EEEEEESSHHHHHHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            3556779999999999999999987  999999986  334444554432  2333322 12232          23346


Q ss_pred             CCcEEEEcCCCCCCCC---CC---HHHHHHHHH----HHHHHHHHHHhhhCCCeEEEEec
Q 017551           88 GMDLVIIPAGVPRKPG---MT---RDDLFNINA----GIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        88 ~ADiVii~ag~p~k~g---~~---r~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      .-|++|..||......   .+   ....+..|+    ...+.+++.+.+. ..+.||++|
T Consensus        87 ~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~IVnis  145 (251)
T d2c07a1          87 NVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN-RYGRIINIS  145 (251)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-TCEEEEEEC
T ss_pred             CceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccC-CCeEEEEEC
Confidence            8999999988644321   22   233445553    4455666666655 456677775

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=96.19  E-value=0.0033  Score=53.59  Aligned_cols=93  Identities=18%  Similarity=0.160  Sum_probs=60.0

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC-C
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG-V   98 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag-~   98 (369)
                      .++|.|||. |.||+.++..+..-+.  ++..||.............      ...   ..++++.++.||+|++... .
T Consensus        47 g~tvgIiG~-G~IG~~va~~l~~fg~--~v~~~d~~~~~~~~~~~~~------~~~---~~~l~~ll~~sD~v~l~~plt  114 (191)
T d1gdha1          47 NKTLGIYGF-GSIGQALAKRAQGFDM--DIDYFDTHRASSSDEASYQ------ATF---HDSLDSLLSVSQFFSLNAPST  114 (191)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHTTTC--EEEEECSSCCCHHHHHHHT------CEE---CSSHHHHHHHCSEEEECCCCC
T ss_pred             ccceEEeec-ccchHHHHHHHHhhcc--ccccccccccccchhhccc------ccc---cCCHHHHHhhCCeEEecCCCC
Confidence            579999999 9999999998886666  9999998652211111110      111   3468899999999999742 1


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 017551           99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      +...++-       |.       +.+...-|++++||++=
T Consensus       115 ~~T~~li-------~~-------~~l~~mk~~a~lIN~sR  140 (191)
T d1gdha1         115 PETRYFF-------NK-------ATIKSLPQGAIVVNTAR  140 (191)
T ss_dssp             TTTTTCB-------SH-------HHHTTSCTTEEEEECSC
T ss_pred             chHhhee-------cH-------HHhhCcCCccEEEecCC
Confidence            2222221       11       23334447899999873

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=96.17  E-value=0.016  Score=43.63  Aligned_cols=74  Identities=19%  Similarity=0.368  Sum_probs=53.1

Q ss_pred             CCCCCEEEEEcCCCccH-HHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551           17 GAAGFKVAILGAAGGIG-QPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP   95 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vG-s~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~   95 (369)
                      ..+.+||-+||. |.+| +++|..|+..|+  +|.-.|.... .....|.+.  ...+.  .+. + .+.++++|+||.+
T Consensus         5 ~~~~~~ihfiGi-gG~GMs~LA~~L~~~G~--~VsGSD~~~~-~~~~~L~~~--Gi~v~--~g~-~-~~~i~~~d~vV~S   74 (96)
T d1p3da1           5 MRRVQQIHFIGI-GGAGMSGIAEILLNEGY--QISGSDIADG-VVTQRLAQA--GAKIY--IGH-A-EEHIEGASVVVVS   74 (96)
T ss_dssp             CTTCCEEEEETT-TSTTHHHHHHHHHHHTC--EEEEEESCCS-HHHHHHHHT--TCEEE--ESC-C-GGGGTTCSEEEEC
T ss_pred             chhCCEEEEEEE-CHHHHHHHHHHHHhCCC--EEEEEeCCCC-hhhhHHHHC--CCeEE--ECC-c-cccCCCCCEEEEC
Confidence            456789999999 8888 567999999999  9999998752 222344442  23333  332 2 4568999999999


Q ss_pred             CCCCC
Q 017551           96 AGVPR  100 (369)
Q Consensus        96 ag~p~  100 (369)
                      .++|.
T Consensus        75 ~AI~~   79 (96)
T d1p3da1          75 SAIKD   79 (96)
T ss_dssp             TTSCT
T ss_pred             CCcCC
Confidence            88884

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=96.16  E-value=0.016  Score=50.99  Aligned_cols=112  Identities=17%  Similarity=0.184  Sum_probs=69.7

Q ss_pred             EE-EEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCCh----------hhhcC
Q 017551           22 KV-AILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------ENALT   87 (369)
Q Consensus        22 KI-~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl----------~~al~   87 (369)
                      || .|+||+++||..++..|++.|.  +|++.|+++  +...+.++...  ..++..+. .-+|.          .+.+-
T Consensus         3 KValITGas~GIG~aia~~la~~Ga--~V~i~~r~~~~l~~~~~~l~~~--g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g   78 (257)
T d2rhca1           3 EVALVTGATSGIGLEIARRLGKEGL--RVFVCARGEEGLRTTLKELREA--GVEADGRTCDVRSVPEIEALVAAVVERYG   78 (257)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            55 6789999999999999999998  999999986  33444455432  22333332 11221          23346


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhh-----CCCeEEEEec
Q 017551           88 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC-----CPNATVNLIS  137 (369)
Q Consensus        88 ~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~~i~~~i~~~-----~p~a~viv~t  137 (369)
                      .-|++|..||.....   ..+   ....+..|+.-...+.+.+-.+     ...+.|++++
T Consensus        79 ~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~  139 (257)
T d2rhca1          79 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIA  139 (257)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEEC
T ss_pred             CCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccc
Confidence            789999999975422   122   3445667766666666555432     2345566653

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=96.15  E-value=0.066  Score=46.89  Aligned_cols=115  Identities=17%  Similarity=0.166  Sum_probs=69.9

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeC-CCchhHHHHhhcccCCCeEEEEeC--CCCh----------hhh
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV-VNTPGVTADISHMDTGAVVRGFLG--QPQL----------ENA   85 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~-~~~~g~~~dL~~~~~~~~v~~~~~--t~dl----------~~a   85 (369)
                      +.+.|.|+||+++||..+|..|+..|.  .+++++. ++......++........+..+..  +.+.          .+.
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~--~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNL--KNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCC--SEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC--EEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHH
Confidence            356899999999999999999999987  6666644 332222233332222233333321  1121          123


Q ss_pred             cCCCcEEEEcCCCCCCCCCCHHHHHHHHHH----HHHHHHHHHhhh--CCCeEEEEec
Q 017551           86 LTGMDLVIIPAGVPRKPGMTRDDLFNINAG----IVRTLCEGIAKC--CPNATVNLIS  137 (369)
Q Consensus        86 l~~ADiVii~ag~p~k~g~~r~~~~~~N~~----i~~~i~~~i~~~--~p~a~viv~t  137 (369)
                      +...|++|..||....  ...+..+..|+.    ..+.+.+.+.+.  .+.+.|++++
T Consensus        82 ~g~iDilvnnAG~~~~--~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~is  137 (254)
T d1sbya1          82 LKTVDILINGAGILDD--HQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANIC  137 (254)
T ss_dssp             HSCCCEEEECCCCCCT--TCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEEC
T ss_pred             cCCCCEEEeCCCCCCH--HHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEe
Confidence            4689999999987542  334555666653    666777777553  3567777774

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=96.14  E-value=0.0031  Score=53.20  Aligned_cols=72  Identities=18%  Similarity=0.241  Sum_probs=44.5

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhH-HHHhh-cccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV-TADIS-HMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~-~~dL~-~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      ++||+|+||+|.+|+-+..+|..++.+ ||..+=-+...|. ..++. +......+.    ..+.++..+++|+|+.+.
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~-ei~~l~s~~~aG~~i~~~~p~~~~~~~~~----~~~~~~~~~~~dvvf~a~   74 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEA-KITYLSSRTYAGKKLEEIFPSTLENSILS----EFDPEKVSKNCDVLFTAL   74 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTE-EEEEEECSTTTTSBHHHHCGGGCCCCBCB----CCCHHHHHHHCSEEEECC
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCc-eEEEeeccccCCCcccccCchhhcccccc----ccCHhHhccccceEEEcc
Confidence            469999999999999999999988865 4444433332222 22222 111112222    234555567899999874

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=96.13  E-value=0.069  Score=47.35  Aligned_cols=115  Identities=14%  Similarity=0.064  Sum_probs=67.1

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCCh----------hhhcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------ENALT   87 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl----------~~al~   87 (369)
                      +.+.|+||+|+||..++..|+..|.  +|++.|++.  ....+.++.... ...+..+. .-++.          .+.+.
T Consensus        26 K~alITGas~GIG~aiA~~la~~Ga--~Vii~~r~~~~l~~~~~~l~~~~-g~~~~~~~~D~~~~~~v~~~~~~~~~~~g  102 (294)
T d1w6ua_          26 KVAFITGGGTGLGKGMTTLLSSLGA--QCVIASRKMDVLKATAEQISSQT-GNKVHAIQCDVRDPDMVQNTVSELIKVAG  102 (294)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHhc-CCceEEEEecccChHHHHHHhhhhhhhcc
Confidence            5788999999999999999999998  999999987  233444454322 12222221 11222          23346


Q ss_pred             CCcEEEEcCCCCCCCC---CC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 017551           88 GMDLVIIPAGVPRKPG---MT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        88 ~ADiVii~ag~p~k~g---~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      ..|++|..+|......   .+   ....+..|...    ....+..+........+++.+.
T Consensus       103 ~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss  163 (294)
T d1w6ua_         103 HPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITT  163 (294)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred             ccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhccccccccccccccccc
Confidence            7899999988643321   22   22233333322    3344444444445555555543

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.12  E-value=0.0052  Score=54.34  Aligned_cols=108  Identities=19%  Similarity=0.195  Sum_probs=67.6

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC----------hhhhc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ----------LENAL   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d----------l~~al   86 (369)
                      .+.+.|+||++.||..++..|+..|.  +|++.|+++  ++....++...      ..+. .-+|          ..+.+
T Consensus         6 GK~alITGas~GIG~aia~~la~~Ga--~V~i~~r~~~~~~~~~~~~~~~------~~~~~Dvs~~~~v~~~~~~~~~~~   77 (250)
T d1ydea1           6 GKVVVVTGGGRGIGAGIVRAFVNSGA--RVVICDKDESGGRALEQELPGA------VFILCDVTQEDDVKTLVSETIRRF   77 (250)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHCTTE------EEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHhcCCC------eEEEccCCCHHHHHHHHHHHHHhc
Confidence            35789999999999999999999998  999999986  22233333221      1111 1112          22334


Q ss_pred             CCCcEEEEcCCCCCCCC----CCH---HHHHHHH----HHHHHHHHHHHhhhCCCeEEEEec
Q 017551           87 TGMDLVIIPAGVPRKPG----MTR---DDLFNIN----AGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~g----~~r---~~~~~~N----~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      -.-|++|..||....++    .+.   ...+..|    ..+.+.+.+.+++.  .+.||+++
T Consensus        78 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~--~G~Ii~is  137 (250)
T d1ydea1          78 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS--QGNVINIS  137 (250)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEC
T ss_pred             CCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC--CCCCcccc
Confidence            67899999998643222    232   3334555    44566666677654  36677765

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=96.11  E-value=0.065  Score=46.68  Aligned_cols=113  Identities=21%  Similarity=0.311  Sum_probs=69.3

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCCh----------hhhcCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQL----------ENALTG   88 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~dl----------~~al~~   88 (369)
                      .+.+.|+||+++||..++..|+..|.  .|++.|+++.......+...  ..++..+. .-+|.          .+.+-.
T Consensus         5 gKvalVTGas~GIG~aia~~la~~Ga--~V~~~~~~~~~~~~~~~~~~--g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~   80 (247)
T d2ew8a1           5 DKLAVITGGANGIGRAIAERFAVEGA--DIAIADLVPAPEAEAAIRNL--GRRVLTVKCDVSQPGDVEAFGKQVISTFGR   80 (247)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCCHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCchHHHHHHHHHc--CCcEEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            35778889999999999999999998  99999998732222222222  12333222 11222          123457


Q ss_pred             CcEEEEcCCCCC-CC--CCC---HHHHHHHHH----HHHHHHHHHHhhhCCCeEEEEec
Q 017551           89 MDLVIIPAGVPR-KP--GMT---RDDLFNINA----GIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        89 ADiVii~ag~p~-k~--g~~---r~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      -|++|..||... .+  ..+   ....+..|+    ...+.+.+.+.+.. .+.||++|
T Consensus        81 iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Iv~is  138 (247)
T d2ew8a1          81 CDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLT  138 (247)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEC
T ss_pred             CCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcC-CCCccccc
Confidence            999999998743 22  123   233445554    45556666666654 56677775

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.09  E-value=0.0024  Score=56.10  Aligned_cols=111  Identities=17%  Similarity=0.264  Sum_probs=67.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--h---hHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--P---GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVII   94 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~---g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii   94 (369)
                      .+++.|+||+++||..++..|++.|.  +|++.|+++.  .   ....|+.+..   .++...  ....+.+..-|++|.
T Consensus         7 gK~~lITGas~GIG~aia~~la~~Ga--~V~~~~r~~~~~~~~~~~~~Dv~~~~---~v~~~~--~~~~~~~g~iDiLVn   79 (237)
T d1uzma1           7 SRSVLVTGGNRGIGLAIAQRLAADGH--KVAVTHRGSGAPKGLFGVEVDVTDSD---AVDRAF--TAVEEHQGPVEVLVS   79 (237)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSSCCCTTSEEEECCTTCHH---HHHHHH--HHHHHHHSSCSEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCcchhcCceEEEEecCCHH---HHHHHH--HHHHHhcCCceEEEe
Confidence            46899999999999999999999998  9999999872  1   1122333221   111000  112345678999999


Q ss_pred             cCCCCCC-C--CCCH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 017551           95 PAGVPRK-P--GMTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        95 ~ag~p~k-~--g~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      .||.... +  ..+.   ...+..|+.    ..+.+++.+.+. ..+.||++|-
T Consensus        80 nAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~g~Iv~isS  132 (237)
T d1uzma1          80 NAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN-KFGRMIFIGS  132 (237)
T ss_dssp             ECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred             eecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccc-CCCceEEEcc
Confidence            9987432 1  2232   334555544    445556666554 4566777754

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=96.07  E-value=0.003  Score=52.53  Aligned_cols=74  Identities=22%  Similarity=0.192  Sum_probs=45.8

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccC--CCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVIIP   95 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~--~~~v~~~~~t~dl~~al~~ADiVii~   95 (369)
                      .++||+|+||+|.+|+.++..+...+-+.=+..+|.......-.|+.....  ...+..   +.++++.++++|+||=.
T Consensus         3 s~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~---~~~~~~~~~~~DViIDF   78 (162)
T d1diha1           3 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTV---QSSLDAVKDDFDVFIDF   78 (162)
T ss_dssp             CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCE---ESCSTTTTTSCSEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCcee---eccHHHHhcccceEEEe
Confidence            467999999999999999998888753322345665432212223322221  122333   24567788999988764

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=96.07  E-value=0.0032  Score=55.77  Aligned_cols=115  Identities=13%  Similarity=0.156  Sum_probs=68.4

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC--CCeEEEEeC----CCChhhhcCCCcE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLG----QPQLENALTGMDL   91 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~--~~~v~~~~~----t~dl~~al~~ADi   91 (369)
                      .+.+.|+||+++||..++..|+..|.  +|++.|+++  +...+.++.....  ..++.....    -....+.+-.-|+
T Consensus         6 gK~alITGas~GIG~aia~~la~~Ga--~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDi   83 (253)
T d1hxha_           6 GKVALVTGGASGVGLEVVKLLLGEGA--KVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCe
Confidence            35778889999999999999999998  899999986  3333444432110  011110000    0011234467899


Q ss_pred             EEEcCCCCCCC---CCCH---HHHHHHHH----HHHHHHHHHHhhhCCCeEEEEecC
Q 017551           92 VIIPAGVPRKP---GMTR---DDLFNINA----GIVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        92 Vii~ag~p~k~---g~~r---~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      +|..||.....   ..+.   ...+..|+    ...+.+.+.+.+  ..+.||+++-
T Consensus        84 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~--~~G~Iv~isS  138 (253)
T d1hxha_          84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKE--TGGSIINMAS  138 (253)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT--TCEEEEEECC
T ss_pred             EEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHh--cCCceecccc
Confidence            99999874421   1222   33445553    455666666654  2477777764

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=96.06  E-value=0.034  Score=48.92  Aligned_cols=113  Identities=14%  Similarity=0.118  Sum_probs=68.5

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCCh----------hhhc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------ENAL   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl----------~~al   86 (369)
                      .+.+.|+||+++||..++..|+..|.  +|++.|+++  +.....++...  ..++..+. .-+|.          .+.+
T Consensus         8 GK~alITGas~GIG~aia~~la~~Ga--~V~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (259)
T d2ae2a_           8 GCTALVTGGSRGIGYGIVEELASLGA--SVYTCSRNQKELNDCLTQWRSK--GFKVEASVCDLSSRSERQELMNTVANHF   83 (259)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhc--CCCceEEEeeCCCHHHHHHHHHHHHHHh
Confidence            45788999999999999999999998  999999986  33333444332  22333222 11221          1223


Q ss_pred             C-CCcEEEEcCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHhhhCCCeEEEEec
Q 017551           87 T-GMDLVIIPAGVPRKP---GMT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        87 ~-~ADiVii~ag~p~k~---g~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      . .-|++|..||.....   .++   ....+..|+.    +.+...+.+.+. ..+.||+++
T Consensus        84 ~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~Ii~is  144 (259)
T d2ae2a_          84 HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKAS-ERGNVVFIS  144 (259)
T ss_dssp             TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-SSEEEEEEC
T ss_pred             CCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhh-ccccccccc
Confidence            3 479999999864422   123   2344566654    334444444443 466677665

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.05  E-value=0.036  Score=42.37  Aligned_cols=70  Identities=19%  Similarity=0.151  Sum_probs=48.5

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      +.+||.|||+ |.+|..-+..|...+.  ++.+++........ .+.+.   ..++.....-+ ++.+.++++|+.+.
T Consensus        11 ~~k~vlVvG~-G~va~~ka~~ll~~ga--~v~v~~~~~~~~~~-~~~~~---~~i~~~~~~~~-~~dl~~~~lv~~at   80 (113)
T d1pjqa1          11 RDRDCLIVGG-GDVAERKARLLLEAGA--RLTVNALTFIPQFT-VWANE---GMLTLVEGPFD-ETLLDSCWLAIAAT   80 (113)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTB--EEEEEESSCCHHHH-HHHTT---TSCEEEESSCC-GGGGTTCSEEEECC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC--eEEEEeccCChHHH-HHHhc---CCceeeccCCC-HHHhCCCcEEeecC
Confidence            4569999999 9999999999999887  89999986533222 23322   23333222222 36789999999874

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=95.99  E-value=0.071  Score=46.92  Aligned_cols=115  Identities=21%  Similarity=0.166  Sum_probs=70.5

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc---hhHHHHhhcccCCCeEEEEe-CCCC----------hhh
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL-GQPQ----------LEN   84 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~---~g~~~dL~~~~~~~~v~~~~-~t~d----------l~~   84 (369)
                      +.+++.|+||++.||..++..|+..|.  +|++.|.+..   ...+.++...  ..++..+. ..+|          ..+
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga--~Vvi~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~~~v~~~~~~~~~   92 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGC--KVIVNYANSTESAEEVVAAIKKN--GSDAACVKANVGVVEDIVRMFEEAVK   92 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC--EEEEEeCCchHHHHHHHHHHHhh--CCceeeEeCCCCCHHHHHHHHHHHHH
Confidence            346999999999999999999999998  9999998752   2223333322  22333322 1222          224


Q ss_pred             hcCCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEec
Q 017551           85 ALTGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS  137 (369)
Q Consensus        85 al~~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t  137 (369)
                      .+-.-|++|..+|.....   ..+   ....+..|+.-...+.+.+..+- ..+.+++++
T Consensus        93 ~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~  152 (272)
T d1g0oa_          93 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMG  152 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEEC
T ss_pred             HhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccc
Confidence            456789999998864422   122   33445666665555555555543 345555553

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=95.99  E-value=0.0071  Score=53.60  Aligned_cols=110  Identities=18%  Similarity=0.174  Sum_probs=68.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCCh----------hhhc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------ENAL   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl----------~~al   86 (369)
                      .+.+.|+||++.||..++..|+..|.  +|++.|+++  +.....++..     ++..+. .-++.          .+.+
T Consensus         5 gK~alVTGas~GIG~aia~~la~~Ga--~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~   77 (254)
T d1hdca_           5 GKTVIITGGARGLGAEAARQAVAAGA--RVVLADVLDEEGAATARELGD-----AARYQHLDVTIEEDWQRVVAYAREEF   77 (254)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHTTGG-----GEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCcCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhCC-----ceEEEEcccCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999998  999999986  2222333321     222211 11221          1334


Q ss_pred             CCCcEEEEcCCCCCC-C--CCC---HHHHHHHHH----HHHHHHHHHHhhhCCCeEEEEec
Q 017551           87 TGMDLVIIPAGVPRK-P--GMT---RDDLFNINA----GIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        87 ~~ADiVii~ag~p~k-~--g~~---r~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ...|++|..||.... +  .++   ....+..|+    -..+.+.+.+.+. ..+.||++|
T Consensus        78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~-~~G~II~is  137 (254)
T d1hdca_          78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA-GGGSIVNIS  137 (254)
T ss_dssp             SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEC
T ss_pred             CCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhc-CCCeecccc
Confidence            689999999987432 2  122   234455554    4555566666554 356777775

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=95.98  E-value=0.049  Score=47.75  Aligned_cols=114  Identities=16%  Similarity=0.155  Sum_probs=69.1

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHhhcccCCCeEEEEe-CCCC---h-------hhh
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---L-------ENA   85 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~---~~g~~~dL~~~~~~~~v~~~~-~t~d---l-------~~a   85 (369)
                      .+.+.|+||+++||..++..|+..|.  +|++.|.++   ++....++.... ..++..+. .-+|   .       .+.
T Consensus         4 gK~alITGas~GIG~aiA~~la~~Ga--~V~~~~r~~~~~~~~~~~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (260)
T d1x1ta1           4 GKVAVVTGSTSGIGLGIATALAAQGA--DIVLNGFGDAAEIEKVRAGLAAQH-GVKVLYDGADLSKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC--EEEEECCSCHHHHHHHHHHHHHHH-TSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCcHHHHHHHHHHHHHhc-CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            34678889999999999999999998  999999975   222233332211 12233221 1122   1       123


Q ss_pred             cCCCcEEEEcCCCCCCCC---CC---HHHHHHHH----HHHHHHHHHHHhhhCCCeEEEEec
Q 017551           86 LTGMDLVIIPAGVPRKPG---MT---RDDLFNIN----AGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        86 l~~ADiVii~ag~p~k~g---~~---r~~~~~~N----~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      +-.-|++|..||......   .+   ....+..|    ....+.+.+.+.+.. .+.||+++
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~is  141 (260)
T d1x1ta1          81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIA  141 (260)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEC
T ss_pred             hCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcC-CceEeecc
Confidence            357899999999754221   22   23345555    445566666666653 56677765

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.97  E-value=0.0041  Score=54.75  Aligned_cols=112  Identities=16%  Similarity=0.203  Sum_probs=67.0

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CC------CChhhhcCCCcEE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQ------PQLENALTGMDLV   92 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t------~dl~~al~~ADiV   92 (369)
                      .+.+.|+||++++|..++..|+..|.  +|++.|+++..  ...+.+..   .++... ..      +...+.+..-|++
T Consensus         6 gK~alITGas~GIG~aia~~la~~G~--~Vi~~~r~~~~--l~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~id~l   78 (245)
T d2ag5a1           6 GKVIILTAAAQGIGQAAALAFAREGA--KVIATDINESK--LQELEKYP---GIQTRVLDVTKKKQIDQFANEVERLDVL   78 (245)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESCHHH--HGGGGGST---TEEEEECCTTCHHHHHHHHHHCSCCSEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCC--EEEEEeCCHHH--HHHHHhcc---CCceeeeeccccccccccccccccceeE
Confidence            34788889999999999999999998  99999998621  11122211   111111 01      1123445789999


Q ss_pred             EEcCCCCCCC---CCCH---HHHHHHH----HHHHHHHHHHHhhhCCCeEEEEecCC
Q 017551           93 IIPAGVPRKP---GMTR---DDLFNIN----AGIVRTLCEGIAKCCPNATVNLISNP  139 (369)
Q Consensus        93 ii~ag~p~k~---g~~r---~~~~~~N----~~i~~~i~~~i~~~~p~a~viv~tNP  139 (369)
                      |..+|.+...   ..+.   ...+..|    ....+.+.+.+.+. +.+-|++++..
T Consensus        79 Vn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~-~~g~Ii~isS~  134 (245)
T d2ag5a1          79 FNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ-KSGNIINMSSV  134 (245)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCS
T ss_pred             EecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccC-CCceeeeeech
Confidence            9999875431   1232   2233444    34455556655554 46667777543

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=95.97  E-value=0.012  Score=51.72  Aligned_cols=116  Identities=16%  Similarity=0.181  Sum_probs=67.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcccCCCeEEEEeC----CCChhhhcCCCcEEEE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLG----QPQLENALTGMDLVII   94 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~~~~v~~~~~----t~dl~~al~~ADiVii   94 (369)
                      .+.+.|+||+++||..++..|+..|.  +|++.|+++. ...+..+.......++.....    -....+.+-.-|++|.
T Consensus         5 GK~alITGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVn   82 (248)
T d2d1ya1           5 GKGVLVTGGARGIGRAIAQAFAREGA--LVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVN   82 (248)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEE
Confidence            45888999999999999999999998  9999999872 222222211100011110000    0112244568999999


Q ss_pred             cCCCCCC-C--CCCH---HHHHHHHH----HHHHHHHHHHhhhCCCeEEEEecC
Q 017551           95 PAGVPRK-P--GMTR---DDLFNINA----GIVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        95 ~ag~p~k-~--g~~r---~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      .||.... +  ..+.   ...+..|+    .+.+.+.+.+.+. ..+.||+++-
T Consensus        83 nAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~~G~Ii~isS  135 (248)
T d2d1ya1          83 NAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKV-GGGAIVNVAS  135 (248)
T ss_dssp             CCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-TCEEEEEECC
T ss_pred             eCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccc-cccccccccc
Confidence            9986432 2  1232   23445554    4555555665544 3567777753

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.96  E-value=0.005  Score=51.57  Aligned_cols=73  Identities=18%  Similarity=0.332  Sum_probs=43.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEE-EEeC--CCchhH-HHHhh-ccc--CCCeEEEEeCCCChhhhcCCCcEE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLH-LYDV--VNTPGV-TADIS-HMD--TGAVVRGFLGQPQLENALTGMDLV   92 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~-L~D~--~~~~g~-~~dL~-~~~--~~~~v~~~~~t~dl~~al~~ADiV   92 (369)
                      ++||+|+||+|++|+-+..+|..+|.+ +|. |.=.  ....|. ..+.. +..  ....+...   .+......++|+|
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~-ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~dvv   76 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHM-TITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPM---SDVRDFSADVDVV   76 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTE-EEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEE---SCGGGTCTTCCEE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCC-ceEeeEeecccccccccccccccccccccccccccc---hhhhhhhccccee
Confidence            469999999999999999999999865 443 3221  111121 11111 111  11223322   3344567899999


Q ss_pred             EEcC
Q 017551           93 IIPA   96 (369)
Q Consensus        93 ii~a   96 (369)
                      +.+.
T Consensus        77 f~al   80 (179)
T d2g17a1          77 FLAT   80 (179)
T ss_dssp             EECS
T ss_pred             eccc
Confidence            9984

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=95.90  E-value=0.0066  Score=51.13  Aligned_cols=36  Identities=22%  Similarity=0.330  Sum_probs=33.3

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      .+++||+|||| |..|...|..|++.++  ++.|+|...
T Consensus        41 ~~~k~V~IIGa-GPAGL~AA~~la~~G~--~Vtl~E~~~   76 (179)
T d1ps9a3          41 VQKKNLAVVGA-GPAGLAFAINAAARGH--QVTLFDAHS   76 (179)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHTTTC--EEEEEESSS
T ss_pred             CCCcEEEEECc-cHHHHHHHHHHHhhcc--ceEEEeccC
Confidence            45689999999 9999999999999999  999999876

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.90  E-value=0.036  Score=48.86  Aligned_cols=113  Identities=16%  Similarity=0.188  Sum_probs=66.9

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeC-CCC----------hhhhc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQ----------LENAL   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~-t~d----------l~~al   86 (369)
                      .+++.|+||++++|..+|..|+..|.  +|++.|+++  +.....++.... ...+..+.. .++          ..+.+
T Consensus        14 GK~alITGassGIG~aiA~~la~~G~--~Vil~~r~~~~l~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~   90 (269)
T d1xu9a_          14 GKKVIVTGASKGIGREMAYHLAKMGA--HVVVTARSKETLQKVVSHCLELG-AASAHYIAGTMEDMTFAEQFVAQAGKLM   90 (269)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHT-CSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHhhhh-cccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence            35899999999999999999999998  999999987  233333333222 223332221 111          11234


Q ss_pred             CCCcEEEEcCCCCC-CC--CCCH---HHHHHHH----HHHHHHHHHHHhhhCCCeEEEEec
Q 017551           87 TGMDLVIIPAGVPR-KP--GMTR---DDLFNIN----AGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        87 ~~ADiVii~ag~p~-k~--g~~r---~~~~~~N----~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ...|+++..+|... .+  ..+.   ...+..|    ..+.+.+.+.+++.  ++.+++++
T Consensus        91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~--~G~ii~is  149 (269)
T d1xu9a_          91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS--NGSIVVVS  149 (269)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEE
T ss_pred             CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc--CCcceEec
Confidence            57899999877532 11  1222   2334445    34555666666543  45566664

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.87  E-value=0.0068  Score=51.86  Aligned_cols=62  Identities=19%  Similarity=0.297  Sum_probs=46.6

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      .++|+|||. |.||+.++..+..-+.  +|..||.........   +. .    .    ..++.+.++.||+|++..
T Consensus        43 gk~vgIiG~-G~IG~~va~~l~~fg~--~V~~~d~~~~~~~~~---~~-~----~----~~~l~~~l~~sDii~~~~  104 (197)
T d1j4aa1          43 DQVVGVVGT-GHIGQVFMQIMEGFGA--KVITYDIFRNPELEK---KG-Y----Y----VDSLDDLYKQADVISLHV  104 (197)
T ss_dssp             GSEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSCCHHHHH---TT-C----B----CSCHHHHHHHCSEEEECS
T ss_pred             CCeEEEecc-cccchhHHHhHhhhcc--cccccCccccccccc---ce-e----e----eccccccccccccccccC
Confidence            579999999 9999999999987666  999999865221111   11 0    1    246788999999999984

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.83  E-value=0.0047  Score=52.13  Aligned_cols=88  Identities=24%  Similarity=0.283  Sum_probs=59.7

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      ..++|.|||. |.||..++..+..-+.  +|..||.....+        .    ...   ..++++.+++||+|++..  
T Consensus        41 ~gk~vgIiG~-G~IG~~va~~l~~~g~--~v~~~d~~~~~~--------~----~~~---~~~l~ell~~sDiv~~~~--  100 (181)
T d1qp8a1          41 QGEKVAVLGL-GEIGTRVGKILAALGA--QVRGFSRTPKEG--------P----WRF---TNSLEEALREARAAVCAL--  100 (181)
T ss_dssp             TTCEEEEESC-STHHHHHHHHHHHTTC--EEEEECSSCCCS--------S----SCC---BSCSHHHHTTCSEEEECC--
T ss_pred             cCceEEEecc-ccccccceeeeecccc--cccccccccccc--------c----eee---eechhhhhhccchhhccc--
Confidence            3579999999 9999999999987776  999999864210        0    011   235789999999999974  


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      |..+. ++ .++  |       .+.++...|++++|+++
T Consensus       101 pl~~~-t~-~li--~-------~~~l~~mk~~ailIN~~  128 (181)
T d1qp8a1         101 PLNKH-TR-GLV--K-------YQHLALMAEDAVFVNVG  128 (181)
T ss_dssp             CCSTT-TT-TCB--C-------HHHHTTSCTTCEEEECS
T ss_pred             ccccc-cc-ccc--c-------cceeeeccccceEEecc
Confidence            44332 11 111  1       13344445889999887

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.82  E-value=0.0029  Score=55.31  Aligned_cols=114  Identities=14%  Similarity=0.163  Sum_probs=62.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch-hHHHHhhcccCC--CeEEEEeCCCChhhhc--CCCcEEEE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTG--AVVRGFLGQPQLENAL--TGMDLVII   94 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~-g~~~dL~~~~~~--~~v~~~~~t~dl~~al--~~ADiVii   94 (369)
                      .++|.|+||+|++|..++..|+++|.  +|+++|.++.. ....-..+....  ......  .....+.+  ..-|++|.
T Consensus         2 gK~vlITGas~GIG~a~a~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~iD~lIn   77 (236)
T d1dhra_           2 ARRVLVYGGRGALGSRCVQAFRARNW--WVASIDVVENEEASASVIVKMTDSFTEQADQV--TAEVGKLLGDQKVDAILC   77 (236)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTC--EEEEEESSCCTTSSEEEECCCCSCHHHHHHHH--HHHHHHHHTTCCEEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCccccccccceeecccCcHHHHHHH--HHHHHHHhCCCCceEEEE
Confidence            46999999999999999999999998  99999987621 000000000000  000000  00111222  24799999


Q ss_pred             cCCC-CC-CC-CCC----HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEec
Q 017551           95 PAGV-PR-KP-GMT----RDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS  137 (369)
Q Consensus        95 ~ag~-p~-k~-g~~----r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t  137 (369)
                      .||. +. .+ ...    ....+..|+.....+++.+..+- ..+.|++++
T Consensus        78 nAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~is  128 (236)
T d1dhra_          78 VAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAG  128 (236)
T ss_dssp             CCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEc
Confidence            8884 22 22 122    22345666655555555554443 456777765

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.79  E-value=0.0022  Score=53.91  Aligned_cols=79  Identities=19%  Similarity=0.234  Sum_probs=53.3

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc----hhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEE
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT----PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVI   93 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~----~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVi   93 (369)
                      -+.++|+|||.|.-||.+++.+|.+.+.  .+.+.|.+..    ......+.|... ..+..++ .+++++....||+||
T Consensus        27 l~GK~vvVIGrS~iVG~Pla~lL~~~ga--TVt~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~lk~~~~~aDIvI  102 (171)
T d1edza1          27 LYGKKCIVINRSEIVGRPLAALLANDGA--TVYSVDVNNIQKFTRGESLKLNKHHV-EDLGEYS-EDLLKKCSLDSDVVI  102 (171)
T ss_dssp             TTTCEEEEECCCTTTHHHHHHHHHTTSC--EEEEECSSEEEEEESCCCSSCCCCEE-EEEEECC-HHHHHHHHHHCSEEE
T ss_pred             CCCCEEEEECCccccHHHHHHHHHHCCC--EEEEeccccccccccccceeeeeecc-ccccccc-hhHHhhccccCCEEE
Confidence            3457999999977889999999999886  8888887651    111122222211 2222221 234777888999999


Q ss_pred             EcCCCCC
Q 017551           94 IPAGVPR  100 (369)
Q Consensus        94 i~ag~p~  100 (369)
                      ...|.|.
T Consensus       103 savG~p~  109 (171)
T d1edza1         103 TGVPSEN  109 (171)
T ss_dssp             ECCCCTT
T ss_pred             EccCCCc
Confidence            9988775

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.77  E-value=0.007  Score=51.08  Aligned_cols=95  Identities=25%  Similarity=0.374  Sum_probs=61.5

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      -..++|.|+|. |.+|+.++..+..-+.  +|..||.........+..       ++.    .++++.++.||+|++.. 
T Consensus        42 l~~k~vgiiG~-G~IG~~va~~~~~fg~--~v~~~d~~~~~~~~~~~~-------~~~----~~l~ell~~sDiv~~~~-  106 (184)
T d1ygya1          42 IFGKTVGVVGL-GRIGQLVAQRIAAFGA--YVVAYDPYVSPARAAQLG-------IEL----LSLDDLLARADFISVHL-  106 (184)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTC--EEEEECTTSCHHHHHHHT-------CEE----CCHHHHHHHCSEEEECC-
T ss_pred             ccceeeeeccc-cchhHHHHHHhhhccc--eEEeecCCCChhHHhhcC-------cee----ccHHHHHhhCCEEEEcC-
Confidence            34579999999 9999999998886555  999999865333322221       121    35788999999999974 


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC
Q 017551           98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP  139 (369)
Q Consensus        98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP  139 (369)
                       |..+. ++ .+  -|.       +.+...-|++++|+++--
T Consensus       107 -Plt~~-T~-~l--in~-------~~l~~mk~~a~lIN~sRG  136 (184)
T d1ygya1         107 -PKTPE-TA-GL--IDK-------EALAKTKPGVIIVNAARG  136 (184)
T ss_dssp             -CCSTT-TT-TC--BCH-------HHHTTSCTTEEEEECSCT
T ss_pred             -CCCch-hh-hh--hhH-------HHHhhhCCCceEEEecch
Confidence             33222 11 01  111       233444589999998743

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.71  E-value=0.0035  Score=53.11  Aligned_cols=91  Identities=24%  Similarity=0.324  Sum_probs=61.1

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      +.++|+|+|. |.+|..++..+..-+.  ++..||.......         ... ..   ..++++.++.||+|++....
T Consensus        43 ~~~~vgiiG~-G~IG~~va~~l~~fg~--~v~~~d~~~~~~~---------~~~-~~---~~~l~ell~~sDii~i~~pl  106 (188)
T d1sc6a1          43 RGKKLGIIGY-GHIGTQLGILAESLGM--YVYFYDIENKLPL---------GNA-TQ---VQHLSDLLNMSDVVSLHVPE  106 (188)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSCCCCC---------TTC-EE---CSCHHHHHHHCSEEEECCCS
T ss_pred             cceEEEEeec-ccchhhhhhhcccccc--eEeeccccccchh---------hhh-hh---hhhHHHHHhhccceeecccC
Confidence            4579999999 9999999998887776  9999998641100         011 11   24688999999999998532


Q ss_pred             -CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC
Q 017551           99 -PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP  139 (369)
Q Consensus        99 -p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP  139 (369)
                       +...++-..              +.++...+++++|+++=.
T Consensus       107 t~~T~~li~~--------------~~l~~mk~~a~lIN~aRG  134 (188)
T d1sc6a1         107 NPSTKNMMGA--------------KEISLMKPGSLLINASRG  134 (188)
T ss_dssp             STTTTTCBCH--------------HHHHHSCTTEEEEECSCS
T ss_pred             CcchhhhccH--------------HHHhhCCCCCEEEEcCcH
Confidence             211222111              334445689999998743

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=95.71  E-value=0.045  Score=47.91  Aligned_cols=79  Identities=15%  Similarity=0.101  Sum_probs=52.0

Q ss_pred             CCCEEEEEcCCC--ccHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHhhcccCCCeEEEEeCC---------CChhhhc
Q 017551           19 AGFKVAILGAAG--GIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQ---------PQLENAL   86 (369)
Q Consensus        19 ~~~KI~IiGA~G--~vGs~la~~l~~~~~~~el~L~D~~~-~~g~~~dL~~~~~~~~v~~~~~t---------~dl~~al   86 (369)
                      +.+++.|+||+|  +||..+|..|+..|.  +|++.|+++ +...+.++........+.....+         .+..+.+
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga--~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGA--TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL   81 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTC--EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHc
Confidence            456899999877  699999999999998  999999987 33334444432211222211111         1123445


Q ss_pred             CCCcEEEEcCCCC
Q 017551           87 TGMDLVIIPAGVP   99 (369)
Q Consensus        87 ~~ADiVii~ag~p   99 (369)
                      ...|++|..+|..
T Consensus        82 g~id~lV~nag~~   94 (274)
T d2pd4a1          82 GSLDFIVHSVAFA   94 (274)
T ss_dssp             SCEEEEEECCCCC
T ss_pred             CCCCeEEeecccc
Confidence            7899999988864

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.69  E-value=0.087  Score=47.25  Aligned_cols=117  Identities=11%  Similarity=0.081  Sum_probs=71.9

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhccc---CCCeEEEEe-CCCChh---------
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD---TGAVVRGFL-GQPQLE---------   83 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~---~~~~v~~~~-~t~dl~---------   83 (369)
                      +.+.+.|+||+++||..++..|+..|.  .|++.|++.  ++..+.+|....   ...++..+. .-+|.+         
T Consensus        11 ~gKvalITGas~GIG~aia~~la~~Ga--~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1          11 QGQVAIVTGGATGIGKAIVKELLELGS--NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            446889999999999999999999998  999999986  344455554321   123444332 112221         


Q ss_pred             -hhcCCCcEEEEcCCCCCCCC---CC---HHHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 017551           84 -NALTGMDLVIIPAGVPRKPG---MT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        84 -~al~~ADiVii~ag~p~k~g---~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                       +.+..-|++|..||......   .+   ....+..|+.    +.+.+++.+.+.. .+.++++|.
T Consensus        89 ~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~Ii~~ss  153 (297)
T d1yxma1          89 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIV  153 (297)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECC
T ss_pred             HHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccc-ccccccccc
Confidence             23457899999988643221   22   2344556644    4455555555543 444555553

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.67  E-value=0.0064  Score=51.94  Aligned_cols=36  Identities=22%  Similarity=0.337  Sum_probs=32.2

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      +..+||+|||| |-.|.+.|+.|.+.+.  +|.|+|.+.
T Consensus         4 ~~~~kVvVIGa-GiaGl~~A~~L~~~G~--~V~vier~~   39 (268)
T d1c0pa1           4 HSQKRVVVLGS-GVIGLSSALILARKGY--SVHILARDL   39 (268)
T ss_dssp             CCSCEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESSC
T ss_pred             CCCCcEEEECc-cHHHHHHHHHHHHCCC--CEEEEeCCC
Confidence            44569999999 9999999999999998  999999864

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=95.65  E-value=0.0027  Score=55.31  Aligned_cols=34  Identities=24%  Similarity=0.347  Sum_probs=31.6

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      -||.|+||+|++|..++..|++.|.  +|+++|+++
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~--~V~~~~~~~   36 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGY--TVLNIDLSA   36 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTE--EEEEEESSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCc
Confidence            3899999999999999999999997  999999975

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=95.64  E-value=0.044  Score=44.66  Aligned_cols=134  Identities=15%  Similarity=0.193  Sum_probs=74.7

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcccCCCeEEEEeCC-CChhhhcCCCcEEEE
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQ-PQLENALTGMDLVII   94 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~~~~v~~~~~t-~dl~~al~~ADiVii   94 (369)
                      .++..+|.|+|+ |.+|+..+..++..+.  +++..|.++. ...+..+.     ......... .......++.|+||.
T Consensus        28 ~~~G~~VlI~Ga-G~vG~~a~qlak~~Ga--~~i~~~~~~~~~~~a~~lG-----ad~~i~~~~~~~~~~~~~~~D~vid   99 (168)
T d1uufa2          28 AGPGKKVGVVGI-GGLGHMGIKLAHAMGA--HVVAFTTSEAKREAAKALG-----ADEVVNSRNADEMAAHLKSFDFILN   99 (168)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHT-----CSEEEETTCHHHHHTTTTCEEEEEE
T ss_pred             CCCCCEEEEecc-chHHHHHHHHhhcccc--cchhhccchhHHHHHhccC-----CcEEEECchhhHHHHhcCCCceeee
Confidence            456679999998 9999999988888886  6677887763 22333332     111111111 112334578999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEec---hhcHH
Q 017551           95 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT---MLDVV  171 (369)
Q Consensus        95 ~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t---~Ld~~  171 (369)
                      +.|.+.-                  +-..+.-..|.+.++.++-|.+....+-...+  .  +...+++|..   .-|..
T Consensus       100 ~~g~~~~------------------~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~l--~--~k~~~i~Gs~~~~~~d~~  157 (168)
T d1uufa2         100 TVAAPHN------------------LDDFTTLLKRDGTMTLVGAPATPHKSPEVFNL--I--MKRRAIAGSMIGGIPETQ  157 (168)
T ss_dssp             CCSSCCC------------------HHHHHTTEEEEEEEEECCCC-------CHHHH--H--TTTCEEEECCSCCHHHHH
T ss_pred             eeecchh------------------HHHHHHHHhcCCEEEEeccCCCCcccccHHHH--H--HCCcEEEEEeecCHHHHH
Confidence            9765521                  11233445588988888766543221111111  1  2346788883   34444


Q ss_pred             HHHHHHHHH
Q 017551          172 RANTFVAEV  180 (369)
Q Consensus       172 R~~~~la~~  180 (369)
                      ++-.+++++
T Consensus       158 e~l~l~a~~  166 (168)
T d1uufa2         158 EMLDFCAEH  166 (168)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHc
Confidence            455555553

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.63  E-value=0.065  Score=43.68  Aligned_cols=100  Identities=19%  Similarity=0.186  Sum_probs=61.5

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcccCCCeEEEEeCCCChhhhc--------C
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLENAL--------T   87 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~~~~v~~~~~t~dl~~al--------~   87 (369)
                      .++.-+|+|+|+ |.+|...+..++..+. ..|+..|.++. ...+.++.     ..........+..+..        .
T Consensus        24 ~~~gd~VlI~G~-G~iG~~~~~~a~~~G~-~~Vi~~d~~~~rl~~a~~~G-----a~~~~~~~~~~~~~~~~~~~~~~g~   96 (171)
T d1pl8a2          24 VTLGHKVLVCGA-GPIGMVTLLVAKAMGA-AQVVVTDLSATRLSKAKEIG-----ADLVLQISKESPQEIARKVEGQLGC   96 (171)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTC-SEEEEEESCHHHHHHHHHTT-----CSEEEECSSCCHHHHHHHHHHHHTS
T ss_pred             CCCCCEEEEECC-CccHHHHHHHHHHcCC-ceEEeccCCHHHHHHHHHhC-----CcccccccccccccccccccccCCC
Confidence            344569999998 9999999988888774 48999999872 22333332     2222222233333222        4


Q ss_pred             CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC
Q 017551           88 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN  141 (369)
Q Consensus        88 ~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~  141 (369)
                      ++|+||.+.|.+.               .+.   ..+.-..|.+.+++++.|.+
T Consensus        97 g~Dvvid~~G~~~---------------~~~---~a~~~~~~gG~iv~~G~~~~  132 (171)
T d1pl8a2          97 KPEVTIECTGAEA---------------SIQ---AGIYATRSGGTLVLVGLGSE  132 (171)
T ss_dssp             CCSEEEECSCCHH---------------HHH---HHHHHSCTTCEEEECSCCCS
T ss_pred             CceEEEeccCCch---------------hHH---HHHHHhcCCCEEEEEecCCC
Confidence            7999999976441               111   22333347888888876654

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=95.62  E-value=0.019  Score=53.07  Aligned_cols=71  Identities=20%  Similarity=0.345  Sum_probs=50.6

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP   95 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~   95 (369)
                      ...++|||+ |..+..-+..+...-.+.+|.+||++.  ....+.++.... ...+..   .+++++|+++||+|+.+
T Consensus       128 a~~l~iiG~-G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~-g~~v~~---~~s~~eav~~ADIi~t~  200 (340)
T d1x7da_         128 ARKMALIGN-GAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYS-GLTIRR---ASSVAEAVKGVDIITTV  200 (340)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCT-TCEEEE---CSSHHHHHTTCSEEEEC
T ss_pred             CceEEEEcc-cHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhcc-CCCcee---cCCHHHHHhcCCceeec
Confidence            469999999 988887776555443478999999986  334455554321 234443   46789999999999874

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=95.62  E-value=0.027  Score=41.70  Aligned_cols=71  Identities=24%  Similarity=0.263  Sum_probs=50.7

Q ss_pred             CCEEEEEcCCCccHH-HHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           20 GFKVAILGAAGGIGQ-PLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs-~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      .|||-+||- |++|. ++|..|++.|+  .|.-.|..... ....|....    ++.+.+ .+ .+.++++|+||.+.++
T Consensus         1 ~~~ihfiGI-gG~GMs~LA~~L~~~G~--~VsGSD~~~~~-~t~~L~~~G----i~i~~g-h~-~~~i~~~d~vV~SsAI   70 (89)
T d1j6ua1           1 HMKIHFVGI-GGIGMSAVALHEFSNGN--DVYGSNIEETE-RTAYLRKLG----IPIFVP-HS-ADNWYDPDLVIKTPAV   70 (89)
T ss_dssp             CCEEEEETT-TSHHHHHHHHHHHHTTC--EEEEECSSCCH-HHHHHHHTT----CCEESS-CC-TTSCCCCSEEEECTTC
T ss_pred             CcEEEEEeE-CHHHHHHHHHHHHhCCC--eEEEEeCCCCh-hHHHHHHCC----CeEEee-ec-ccccCCCCEEEEecCc
Confidence            379999999 88887 67889999999  99999987622 222355432    223333 23 4668999999999888


Q ss_pred             CC
Q 017551           99 PR  100 (369)
Q Consensus        99 p~  100 (369)
                      |.
T Consensus        71 ~~   72 (89)
T d1j6ua1          71 RD   72 (89)
T ss_dssp             CT
T ss_pred             CC
Confidence            74

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=95.60  E-value=0.016  Score=51.64  Aligned_cols=110  Identities=21%  Similarity=0.243  Sum_probs=66.3

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC----------hhhhc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ----------LENAL   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d----------l~~al   86 (369)
                      .+.+.|+||+++||..++..|+..|.  +|++.|++.  +.....++..     ++..+. .-++          ..+.+
T Consensus         5 gK~alITGas~GIG~aia~~la~~Ga--~V~i~~r~~~~l~~~~~~~~~-----~~~~~~~Dv~~~~~~~~~~~~~~~~~   77 (276)
T d1bdba_           5 GEAVLITGGASGLGRALVDRFVAEGA--KVAVLDKSAERLAELETDHGD-----NVLGIVGDVRSLEDQKQAASRCVARF   77 (276)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHGG-----GEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHcCC-----CeeEEecccccHHHHHHHHHHHHHHh
Confidence            45889999999999999999999998  999999986  2223333322     122111 1112          12335


Q ss_pred             CCCcEEEEcCCCCCCC-------CCC----HHHHHHHH----HHHHHHHHHHHhhhCCCeEEEEec
Q 017551           87 TGMDLVIIPAGVPRKP-------GMT----RDDLFNIN----AGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        87 ~~ADiVii~ag~p~k~-------g~~----r~~~~~~N----~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      ...|++|..||.....       .+.    ....+..|    ....+.+.+.+.+.. ..+|++.|
T Consensus        78 g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S  142 (276)
T d1bdba_          78 GKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTIS  142 (276)
T ss_dssp             SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECC
T ss_pred             CCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeee
Confidence            6889999999863211       111    22334445    355666667766542 44444444

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=95.58  E-value=0.016  Score=46.96  Aligned_cols=60  Identities=15%  Similarity=0.129  Sum_probs=38.4

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP   95 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~   95 (369)
                      ||++||. |.||++++..|...++  .++ +|....+.  .++..... . .   .  .. .+.+.++|++|+.
T Consensus         2 kIg~IGl-G~MG~~ma~~L~~~g~--~~~-~~~~~~~~--~~~~~~~~-~-~---~--~~-~~~~~~~~~~i~~   61 (156)
T d2cvza2           2 KVAFIGL-GAMGYPMAGHLARRFP--TLV-WNRTFEKA--LRHQEEFG-S-E---A--VP-LERVAEARVIFTC   61 (156)
T ss_dssp             CEEEECC-STTHHHHHHHHHTTSC--EEE-ECSSTHHH--HHHHHHHC-C-E---E--CC-GGGGGGCSEEEEC
T ss_pred             eEEEEeH-HHHHHHHHHHHHhCCC--EEE-EeCCHHHH--HHHHHHcC-C-c---c--cc-cccccceeEEEec
Confidence            8999999 9999999999988775  554 55443221  22222111 1 1   1  12 3567789999887

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.57  E-value=0.11  Score=45.57  Aligned_cols=114  Identities=16%  Similarity=0.146  Sum_probs=68.2

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCCh----------hhh
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------ENA   85 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl----------~~a   85 (369)
                      +.+.+.|+||+++||..++..|+..|.  .|++.|+++  +...+.++....  .++..+. .-++.          .+.
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga--~V~~~~r~~~~l~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGA--VIHTCARNEYELNECLSKWQKKG--FQVTGSVCDASLRPEREKLMQTVSSM   82 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CceEEEeccCCCHHHHHHHHHHHHHH
Confidence            456899999999999999999999998  999999986  333344444322  2333322 11221          122


Q ss_pred             cC-CCcEEEEcCCCCC-CC--CCCH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEec
Q 017551           86 LT-GMDLVIIPAGVPR-KP--GMTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        86 l~-~ADiVii~ag~p~-k~--g~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      +. .-|++|..||... .+  ..+.   ...+..|+.    +.+.+.+.+.+.. .+.|+++|
T Consensus        83 ~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~is  144 (259)
T d1xq1a_          83 FGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMS  144 (259)
T ss_dssp             HTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC
T ss_pred             hCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccc-cccccccc
Confidence            32 3799999988643 22  2332   334455543    4455555555543 45566665

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.49  E-value=0.052  Score=48.92  Aligned_cols=113  Identities=19%  Similarity=0.289  Sum_probs=68.6

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-------h----hHHHHhhcccCCCeEEEEe-CCCChh----
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-------P----GVTADISHMDTGAVVRGFL-GQPQLE----   83 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-------~----g~~~dL~~~~~~~~v~~~~-~t~dl~----   83 (369)
                      .+.+.|+||+++||..++..|+..|.  .|++.|++..       .    ....++...  ........ ...+.+    
T Consensus         7 gKvalITGas~GIG~aiA~~la~~Ga--~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~v~   82 (302)
T d1gz6a_           7 GRVVLVTGAGGGLGRAYALAFAERGA--LVVVNDLGGDFKGVGKGSSAADKVVEEIRRR--GGKAVANYDSVEAGEKLVK   82 (302)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC--EEEEECCCBCTTSCBCCSHHHHHHHHHHHHT--TCEEEEECCCGGGHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCC--EEEEEeCCchhhhhhhhHHHHHHHHHHHhhc--ccccccccchHHHHHHHHH
Confidence            45788889999999999999999998  9999998641       1    112222221  12222211 111221    


Q ss_pred             ---hhcCCCcEEEEcCCCCCCC---CCCH---HHHHHHHH----HHHHHHHHHHhhhCCCeEEEEec
Q 017551           84 ---NALTGMDLVIIPAGVPRKP---GMTR---DDLFNINA----GIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        84 ---~al~~ADiVii~ag~p~k~---g~~r---~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                         +.+-.-|++|..||..+..   .++.   ...+..|+    .+.+.+.+.+.+.. .+.||++|
T Consensus        83 ~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IV~is  148 (302)
T d1gz6a_          83 TALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTA  148 (302)
T ss_dssp             HHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEEC
T ss_pred             HHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCC-CcEEEEeC
Confidence               3455799999999975422   1232   33445554    45666666676654 56777775

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=95.42  E-value=0.014  Score=47.74  Aligned_cols=66  Identities=23%  Similarity=0.281  Sum_probs=40.4

Q ss_pred             CCEEEEEcCCCccHHH-HHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEeCCCChhhhcC-CCcEEEEc
Q 017551           20 GFKVAILGAAGGIGQP-LAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQLENALT-GMDLVIIP   95 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~-la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~~t~dl~~al~-~ADiVii~   95 (369)
                      ++||+|||+ |.+|+. ....+...+. .+++++|.+..  ...+.++..    +  ..   .+|+++.++ +.|+|+++
T Consensus         1 tirvgiiG~-G~~~~~~~~~~l~~~~~-~~~~~~d~~~~~~~~~~~~~~~----~--~~---~~~~~~ll~~~iD~V~I~   69 (167)
T d1xeaa1           1 SLKIAMIGL-GDIAQKAYLPVLAQWPD-IELVLCTRNPKVLGTLATRYRV----S--AT---CTDYRDVLQYGVDAVMIH   69 (167)
T ss_dssp             CEEEEEECC-CHHHHHTHHHHHTTSTT-EEEEEECSCHHHHHHHHHHTTC----C--CC---CSSTTGGGGGCCSEEEEC
T ss_pred             CeEEEEEcC-CHHHHHHHHHHHHhCCC-cEEEEEECCHHHHHHHHHhccc----c--cc---cccHHHhcccccceeccc
Confidence            479999999 999976 4556655543 38889998762  222222211    1  11   234555553 78999987


Q ss_pred             C
Q 017551           96 A   96 (369)
Q Consensus        96 a   96 (369)
                      .
T Consensus        70 t   70 (167)
T d1xeaa1          70 A   70 (167)
T ss_dssp             S
T ss_pred             c
Confidence            3

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=95.40  E-value=0.23  Score=43.33  Aligned_cols=114  Identities=13%  Similarity=0.102  Sum_probs=67.9

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCChh----------hh
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQLE----------NA   85 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl~----------~a   85 (369)
                      +.+++.|+||+++||..++..|++.|.  +|++.|.++  +.....++....  ..+..+. .-++.+          +.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~--~V~i~~r~~~~l~~~~~~~~~~~--~~~~~~~~D~s~~~~~~~~~~~~~~~   80 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGA--RVYTCSRNEKELDECLEIWREKG--LNVEGSVCDLLSRTERDKLMQTVAHV   80 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CCceEEEeecCCHHHHHHHHHHHHHH
Confidence            457899999999999999999999998  999999987  233333343322  2222221 112221          22


Q ss_pred             c-CCCcEEEEcCCCCCCC---CCC---HHHHHHHHH----HHHHHHHHHHhhhCCCeEEEEec
Q 017551           86 L-TGMDLVIIPAGVPRKP---GMT---RDDLFNINA----GIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        86 l-~~ADiVii~ag~p~k~---g~~---r~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      + ..-|++|..+|.....   ..+   ....+..|+    ...+.+.+.+.+. +.+.++++|
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~-~~g~ii~is  142 (258)
T d1ae1a_          81 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKAS-QNGNVIFLS  142 (258)
T ss_dssp             TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TSEEEEEEC
T ss_pred             hCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccc-ccccccccc
Confidence            3 2378888888865422   122   233344443    4455555566555 455566665

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=95.35  E-value=0.0089  Score=48.86  Aligned_cols=69  Identities=17%  Similarity=0.382  Sum_probs=45.8

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCC-CCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~-~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      .||+|+||+|.+|+-+..+|..++ ...++.++.-+...|..  +...  ........ ..  +..+.++|+++.+.
T Consensus         2 ~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~--~~~~--~~~~~~~~-~~--~~~~~~~d~~f~~~   71 (154)
T d2gz1a1           2 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKS--LKFK--DQDITIEE-TT--ETAFEGVDIALFSA   71 (154)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCE--EEET--TEEEEEEE-CC--TTTTTTCSEEEECS
T ss_pred             CEEEEECCCcHHHHHHHHHHHcCCCCceEEEEeccccccccc--cccc--CCcccccc-cc--hhhhhhhhhhhhcc
Confidence            499999999999999999998886 36788888765422221  1111  12223221 12  35678999999985

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=95.34  E-value=0.056  Score=47.51  Aligned_cols=114  Identities=16%  Similarity=0.193  Sum_probs=66.7

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC-CCeEEEEe-CCCCh----------hhhc
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFL-GQPQL----------ENAL   86 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~-~~~v~~~~-~t~dl----------~~al   86 (369)
                      +.+.|+||+++||..++..|+..|.  +|++.|+++  +...+.++..... ..++..+. .-+|.          .+.+
T Consensus         6 KvalVTGas~GIG~aia~~la~~Ga--~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (264)
T d1spxa_           6 KVAIITGSSNGIGRATAVLFAREGA--KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   83 (264)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCcCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4567779999999999999999998  999999987  3444455544321 12344332 11221          1234


Q ss_pred             CCCcEEEEcCCCCCC-----C--CCCH---HHHHHHHH----HHHHHHHHHHhhhCCCeEEEEec
Q 017551           87 TGMDLVIIPAGVPRK-----P--GMTR---DDLFNINA----GIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        87 ~~ADiVii~ag~p~k-----~--g~~r---~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                      -.-|++|..||....     +  .++.   ...+..|+    ...+.+.+.+++. ..++|++.|
T Consensus        84 g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~-~g~iI~~~S  147 (264)
T d1spxa_          84 GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST-KGEIVNISS  147 (264)
T ss_dssp             SCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECC
T ss_pred             CCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccc-cCcceeeee
Confidence            579999999886321     1  1222   23445554    3556666666544 345555544

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.34  E-value=0.14  Score=44.58  Aligned_cols=114  Identities=19%  Similarity=0.149  Sum_probs=64.3

Q ss_pred             EEEEE-cCCCccHHHHHHHHHh---CCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeC-CCChh---hhc-----
Q 017551           22 KVAIL-GAAGGIGQPLAMLMKI---NPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQLE---NAL-----   86 (369)
Q Consensus        22 KI~Ii-GA~G~vGs~la~~l~~---~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~-t~dl~---~al-----   86 (369)
                      ||+|| ||+++||..++..|+.   .|.  .|++.|++.  +...+.+|.......++..+.. -++.+   +.+     
T Consensus         7 KvalITGas~GIG~aiA~~lA~~~~~G~--~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~   84 (259)
T d1oaaa_           7 AVCVLTGASRGFGRALAPQLARLLSPGS--VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             EEEEESSCSSHHHHHHHHHHHTTBCTTC--EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHhcccCCC--EEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            66665 9999999999999986   455  999999987  3344455543322344554432 23321   111     


Q ss_pred             ------CCCcEEEEcCCCCC--CCC----CC---HHHHHHHHHHHHHHHHHHHhhhC-----CCeEEEEec
Q 017551           87 ------TGMDLVIIPAGVPR--KPG----MT---RDDLFNINAGIVRTLCEGIAKCC-----PNATVNLIS  137 (369)
Q Consensus        87 ------~~ADiVii~ag~p~--k~g----~~---r~~~~~~N~~i~~~i~~~i~~~~-----p~a~viv~t  137 (369)
                            -+-|++|..+|...  ..+    ++   ....+..|+.-...+.+.+..+-     +.+.|++++
T Consensus        85 ~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~is  155 (259)
T d1oaaa_          85 LPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNIS  155 (259)
T ss_dssp             SCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEEC
T ss_pred             hhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccc
Confidence                  13457777777532  112    22   23456667655555555544432     245666664

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=95.28  E-value=0.077  Score=42.41  Aligned_cols=99  Identities=7%  Similarity=-0.034  Sum_probs=61.3

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEeC-CCCh----hhhcCCCcEE
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLG-QPQL----ENALTGMDLV   92 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~~-t~dl----~~al~~ADiV   92 (369)
                      ...|.|+|. |.+|..++..|...+.  +++++|.++.  .....++...    .+....| .+|.    ...+.+||.|
T Consensus         3 knHiII~G~-g~~g~~l~~~L~~~~~--~v~vId~d~~~~~~~~~~~~~~----~~~vi~Gd~~d~~~L~~a~i~~a~~v   75 (153)
T d1id1a_           3 KDHFIVCGH-SILAINTILQLNQRGQ--NVTVISNLPEDDIKQLEQRLGD----NADVIPGDSNDSSVLKKAGIDRCRAI   75 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTC--CEEEEECCCHHHHHHHHHHHCT----TCEEEESCTTSHHHHHHHTTTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEeccchhHHHHHHHhhcC----CcEEEEccCcchHHHHHhccccCCEE
Confidence            447999999 9999999999999887  8999998862  2233333321    1222211 2332    2346889999


Q ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe-cCCC
Q 017551           93 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI-SNPV  140 (369)
Q Consensus        93 ii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~-tNPv  140 (369)
                      |++.+-         |  ..|+.+    +..+++.+|+..++.- .+|.
T Consensus        76 i~~~~~---------d--~~n~~~----~~~~r~~~~~~~iia~~~~~~  109 (153)
T d1id1a_          76 LALSDN---------D--ADNAFV----VLSAKDMSSDVKTVLAVSDSK  109 (153)
T ss_dssp             EECSSC---------H--HHHHHH----HHHHHHHTSSSCEEEECSSGG
T ss_pred             EEcccc---------H--HHHHHH----HHHHHHhCCCCceEEEEcCHH
Confidence            998421         1  345433    3455677888755444 4554

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=95.27  E-value=0.044  Score=44.50  Aligned_cols=66  Identities=12%  Similarity=0.218  Sum_probs=43.9

Q ss_pred             CCEEEEEcCCCccHHH-HHHHHHhCCCCcEEEEEeCCCch--hHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           20 GFKVAILGAAGGIGQP-LAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~-la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      ++||+|||+ |.+|+. ....+...+.+.-+.++|.+...  ..+.++.       +..   .+++++.+++.|+|+++.
T Consensus         1 Kiri~iIG~-G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~-------~~~---~~~~~~l~~~~D~V~I~t   69 (164)
T d1tlta1           1 KLRIGVVGL-GGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWR-------IPY---ADSLSSLAASCDAVFVHS   69 (164)
T ss_dssp             CEEEEEECC-STHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHT-------CCB---CSSHHHHHTTCSEEEECS
T ss_pred             CCEEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhccc-------ccc---cccchhhhhhcccccccc
Confidence            369999999 999986 56677766655556789988732  2222221       111   245667779999999873

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=95.25  E-value=0.024  Score=49.43  Aligned_cols=152  Identities=17%  Similarity=0.128  Sum_probs=88.2

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC----------hhhhc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ----------LENAL   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d----------l~~al   86 (369)
                      .+++.|+||++++|..++..|+..|.  +|++.|.+..  .....++.     .++..+. .-++          ..+.+
T Consensus         5 gK~alItGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dls~~~~i~~~~~~i~~~~   77 (241)
T d2a4ka1           5 GKTILVTGAASGIGRAALDLFAREGA--SLVAVDREERLLAEAVAALE-----AEAIAVVADVSDPKAVEAVFAEALEEF   77 (241)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHTCC-----SSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHcC-----CceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            45888999999999999999999998  9999999862  22222222     2222221 1111          12334


Q ss_pred             CCCcEEEEcCCCCC-CC--CCC---HHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCChhHHHHHHHHHhCCCCC
Q 017551           87 TGMDLVIIPAGVPR-KP--GMT---RDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDP  159 (369)
Q Consensus        87 ~~ADiVii~ag~p~-k~--g~~---r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~i~ae~~~~~~~~~~  159 (369)
                      ..-|++|..||.+. .+  ..+   ....+..|+.....+.+....+.. ...+++.|.-.....+-.  ..+       
T Consensus        78 g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~~~~--~~Y-------  148 (241)
T d2a4ka1          78 GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAFGL--AHY-------  148 (241)
T ss_dssp             SCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHHHH--HHH-------
T ss_pred             CCccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccccccCc--ccc-------
Confidence            67999999887643 22  222   344567787777777777766653 344555554433322211  111       


Q ss_pred             CcEEEechhcHHHHHHHHHHHhCCCCCCCceeEE
Q 017551          160 KKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  193 (369)
Q Consensus       160 ~kviG~t~Ld~~R~~~~la~~lgv~~~~V~~~vi  193 (369)
                          +.+---...+-+.+|+.++  +..|++-.+
T Consensus       149 ----~~sK~al~~lt~~lA~el~--~~gIrvN~I  176 (241)
T d2a4ka1         149 ----AAGKLGVVGLARTLALELA--RKGVRVNVL  176 (241)
T ss_dssp             ----HHCSSHHHHHHHHHHHHHT--TTTCEEEEE
T ss_pred             ----chhhHHHHHHHHHHHHHHh--HhCCEEeee
Confidence                1111123346788888885  456765544

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=95.17  E-value=0.085  Score=42.70  Aligned_cols=101  Identities=15%  Similarity=0.079  Sum_probs=61.9

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHhhcccCCCeEEEEeCCCChh---hhc-----C
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLE---NAL-----T   87 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-~~g~~~dL~~~~~~~~v~~~~~t~dl~---~al-----~   87 (369)
                      .+...+|.|+|+ |.+|...+..++..+.  +++.+|.++ ....+.++...   ..+.......+..   +.+     .
T Consensus        24 ~~~g~~vlV~G~-G~vG~~~~~~ak~~Ga--~vi~v~~~~~r~~~a~~~ga~---~~~~~~~~~~~~~~~~~~~~~~~g~   97 (170)
T d1e3ja2          24 VQLGTTVLVIGA-GPIGLVSVLAAKAYGA--FVVCTARSPRRLEVAKNCGAD---VTLVVDPAKEEESSIIERIRSAIGD   97 (170)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHTTCS---EEEECCTTTSCHHHHHHHHHHHSSS
T ss_pred             CCCCCEEEEEcc-cccchhhHhhHhhhcc--cccccchHHHHHHHHHHcCCc---EEEeccccccccchhhhhhhccccc
Confidence            345569999997 9999999999988886  899999987 33334443311   1111111112211   111     5


Q ss_pred             CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC
Q 017551           88 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN  141 (369)
Q Consensus        88 ~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~  141 (369)
                      ++|+||.+.|.+.                  .+-..++-..|.+.+++++.|.+
T Consensus        98 g~D~vid~~g~~~------------------~~~~a~~~~~~~G~iv~~G~~~~  133 (170)
T d1e3ja2          98 LPNVTIDCSGNEK------------------CITIGINITRTGGTLMLVGMGSQ  133 (170)
T ss_dssp             CCSEEEECSCCHH------------------HHHHHHHHSCTTCEEEECSCCSS
T ss_pred             CCceeeecCCChH------------------HHHHHHHHHhcCCceEEEecCCC
Confidence            6999999876441                  12223333458999999977654

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=95.15  E-value=0.11  Score=45.08  Aligned_cols=114  Identities=20%  Similarity=0.240  Sum_probs=69.6

Q ss_pred             E-EEEEcCCCccHHHHHHHHHhCCC-----CcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCCh----------
Q 017551           22 K-VAILGAAGGIGQPLAMLMKINPL-----VSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------   82 (369)
Q Consensus        22 K-I~IiGA~G~vGs~la~~l~~~~~-----~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl----------   82 (369)
                      + |.|+||+++||..++..|+..|.     ...++++|.+.  +.....++...  ..++..+. .-+|.          
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dvt~~~~v~~~~~~~   79 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTDTITADISDMADVRRLTTHI   79 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT--TCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHH
Confidence            5 56889999999999999998774     12489999986  33344445432  23333332 12222          


Q ss_pred             hhhcCCCcEEEEcCCCCCCCC---CC---HHHHHHHHH----HHHHHHHHHHhhhCCCeEEEEecC
Q 017551           83 ENALTGMDLVIIPAGVPRKPG---MT---RDDLFNINA----GIVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        83 ~~al~~ADiVii~ag~p~k~g---~~---r~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      .+.+-.-|++|..||......   .+   ....+..|+    .+.+.+.+.|.+. ..+.+++++.
T Consensus        80 ~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~G~Ii~isS  144 (240)
T d2bd0a1          80 VERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQ-HSGHIFFITS  144 (240)
T ss_dssp             HHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred             HHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhc-CCCceEEEec
Confidence            233467999999998754221   22   233455553    5566666666654 4566777753

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.15  E-value=0.035  Score=46.15  Aligned_cols=56  Identities=20%  Similarity=0.400  Sum_probs=42.2

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      +.++|+|||.|.-+|.+++.+|.+.+.  .+.++|..                       +.++.+-+++||+||...|.
T Consensus        38 ~Gk~vvVIGrS~iVGrPLa~lL~~~ga--tVt~~~~~-----------------------t~~l~~~~~~aDivi~a~G~   92 (170)
T d1a4ia1          38 AGRHAVVVGRSKIVGAPMHDLLLWNNA--TVTTCHSK-----------------------TAHLDEEVNKGDILVVATGQ   92 (170)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHHTTC--EEEEECTT-----------------------CSSHHHHHTTCSEEEECCCC
T ss_pred             ccceEEEEecCCccchHHHHHHHhccC--ceEEEecc-----------------------cccHHHHHhhccchhhcccc
Confidence            457999999988899999999998876  77777754                       23444556677777776665


Q ss_pred             C
Q 017551           99 P   99 (369)
Q Consensus        99 p   99 (369)
                      |
T Consensus        93 ~   93 (170)
T d1a4ia1          93 P   93 (170)
T ss_dssp             T
T ss_pred             c
Confidence            5

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=95.10  E-value=0.023  Score=46.84  Aligned_cols=65  Identities=20%  Similarity=0.383  Sum_probs=45.8

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      +++||+|+|. |.+|+.++..+.+.+-+.-+.++|.+...         .....+..   ..++.+...+.|+|+++.
T Consensus         2 ~kirvgiiG~-G~ig~~~~~~l~~~~~~elvav~~~~~~~---------~~~~~~~~---~~~~~~~~~~~D~Vvi~t   66 (170)
T d1f06a1           2 TNIRVAIVGY-GNLGRSVEKLIAKQPDMDLVGIFSRRATL---------DTKTPVFD---VADVDKHADDVDVLFLCM   66 (170)
T ss_dssp             CCEEEEEECC-SHHHHHHHHHHTTCSSEEEEEEEESSSCC---------SSSSCEEE---GGGGGGTTTTCSEEEECS
T ss_pred             CcceEEEECC-hHHHHHHHHHHHhCCCcEEEEEEeccccc---------cccccccc---chhhhhhccccceEEEeC
Confidence            4579999999 99999999888887655556677876421         11122332   345667789999999974

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=95.09  E-value=0.008  Score=52.80  Aligned_cols=37  Identities=19%  Similarity=0.207  Sum_probs=33.6

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ..+++||+|||| |-.|.+.|+.|++.|+  +|+|+|..+
T Consensus        27 ~~~pkkV~IIGa-G~aGLsaA~~L~~~G~--~V~vlE~~~   63 (370)
T d2iida1          27 TSNPKHVVIVGA-GMAGLSAAYVLAGAGH--QVTVLEASE   63 (370)
T ss_dssp             CSSCCEEEEECC-BHHHHHHHHHHHHHTC--EEEEECSSS
T ss_pred             CCCCCeEEEECC-CHHHHHHHHHHHHCCC--CEEEEeCCC
Confidence            556789999999 9999999999999998  999999865

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.05  E-value=0.03  Score=46.37  Aligned_cols=71  Identities=10%  Similarity=0.224  Sum_probs=44.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcc-cCCCeEEEEeCCCChhhhc--CCCcEEEEcC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM-DTGAVVRGFLGQPQLENAL--TGMDLVIIPA   96 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~-~~~~~v~~~~~t~dl~~al--~~ADiVii~a   96 (369)
                      .+||+|||+ |.+|+..+..+...+-+.-+.++|.+...+.  ++... ......+.+   +|+++.+  .+.|+|+++.
T Consensus         1 kiki~iIG~-G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~--~~~~~~~~~~~~~~~---~~~~~ll~~~~iD~v~I~t   74 (184)
T d1ydwa1           1 QIRIGVMGC-ADIARKVSRAIHLAPNATISGVASRSLEKAK--AFATANNYPESTKIH---GSYESLLEDPEIDALYVPL   74 (184)
T ss_dssp             CEEEEEESC-CTTHHHHHHHHHHCTTEEEEEEECSSHHHHH--HHHHHTTCCTTCEEE---SSHHHHHHCTTCCEEEECC
T ss_pred             CeEEEEEcC-CHHHHHHHHHHHhCCCCEEEEEEeCCccccc--cchhccccccceeec---CcHHHhhhccccceeeecc
Confidence            369999998 9999999988877764433447898763221  12111 112233443   4666655  5689999873

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=95.03  E-value=0.0078  Score=51.45  Aligned_cols=91  Identities=22%  Similarity=0.228  Sum_probs=59.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP   99 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p   99 (369)
                      .++|+|+|. |.||+.++..++.-+.  ++..||.....+.         ......    .++++.++.||+|++..  |
T Consensus        45 ~ktvgIiG~-G~IG~~va~~l~~fg~--~v~~~d~~~~~~~---------~~~~~~----~~l~~l~~~~D~v~~~~--p  106 (199)
T d1dxya1          45 QQTVGVMGT-GHIGQVAIKLFKGFGA--KVIAYDPYPMKGD---------HPDFDY----VSLEDLFKQSDVIDLHV--P  106 (199)
T ss_dssp             GSEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSCCSSC---------CTTCEE----CCHHHHHHHCSEEEECC--C
T ss_pred             ceeeeeeec-ccccccccccccccce--eeeccCCccchhh---------hcchhH----HHHHHHHHhcccceeee--c
Confidence            479999999 9999999999987666  9999998642110         111221    35788899999999974  3


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC
Q 017551          100 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP  139 (369)
Q Consensus       100 ~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP  139 (369)
                      ..+. ++ .++  |.       +.+...-+++++|+++=.
T Consensus       107 lt~~-T~-~li--~~-------~~l~~mk~~a~lIN~aRG  135 (199)
T d1dxya1         107 GIEQ-NT-HII--NE-------AAFNLMKPGAIVINTARP  135 (199)
T ss_dssp             CCGG-GT-TSB--CH-------HHHHHSCTTEEEEECSCT
T ss_pred             cccc-cc-ccc--cH-------HHhhccCCceEEEecccH
Confidence            2221 11 011  11       233334588999999853

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=94.99  E-value=0.022  Score=47.47  Aligned_cols=75  Identities=20%  Similarity=0.280  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hh----HHHHhhcccCCCeEEEEe--CCCChhhhcCCCcE
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PG----VTADISHMDTGAVVRGFL--GQPQLENALTGMDL   91 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g----~~~dL~~~~~~~~v~~~~--~t~dl~~al~~ADi   91 (369)
                      +..+|.|+|+ |++|.++++.|...+ +.+|++++++.. ..    .+..+... ....+....  ...++.+.+.++|+
T Consensus        17 ~~k~vlIlGa-GGaarai~~al~~~g-~~~i~i~nR~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~di   93 (182)
T d1vi2a1          17 KGKTMVLLGA-GGASTAIGAQGAIEG-LKEIKLFNRRDEFFDKALAFAQRVNEN-TDCVVTVTDLADQQAFAEALASADI   93 (182)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTT-CSEEEEEECSSTTHHHHHHHHHHHHHH-SSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHhhcC-CceEeeeccchHHHHHHHHHHHHHHhh-cCcceEeeecccccchhhhhcccce
Confidence            4579999999 999999999998876 469999999762 11    22223221 123333321  11234567789999


Q ss_pred             EEEcC
Q 017551           92 VIIPA   96 (369)
Q Consensus        92 Vii~a   96 (369)
                      ||.+.
T Consensus        94 iIN~T   98 (182)
T d1vi2a1          94 LTNGT   98 (182)
T ss_dssp             EEECS
T ss_pred             ecccc
Confidence            99974

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=94.96  E-value=0.025  Score=46.84  Aligned_cols=58  Identities=21%  Similarity=0.442  Sum_probs=45.1

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      -..++|+|||.|..+|.+++.+|.+.+.  .+..++..                       +.++.+-+++||+||.++|
T Consensus        35 l~GK~v~VIGrS~~VG~Pla~lL~~~ga--tVt~~h~~-----------------------t~~l~~~~~~ADivI~a~G   89 (166)
T d1b0aa1          35 TFGLNAVVIGASNIVGRPMSMELLLAGC--TTTVTHRF-----------------------TKNLRHHVENADLLIVAVG   89 (166)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHTTTC--EEEEECSS-----------------------CSCHHHHHHHCSEEEECSC
T ss_pred             cccceEEEEeccccccHHHHHHHHHhhc--cccccccc-----------------------cchhHHHHhhhhHhhhhcc
Confidence            3467999999988899999999998876  56655532                       3456677889999999888


Q ss_pred             CCC
Q 017551           98 VPR  100 (369)
Q Consensus        98 ~p~  100 (369)
                      .|.
T Consensus        90 ~p~   92 (166)
T d1b0aa1          90 KPG   92 (166)
T ss_dssp             CTT
T ss_pred             Ccc
Confidence            664

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=94.95  E-value=0.076  Score=46.29  Aligned_cols=110  Identities=8%  Similarity=0.017  Sum_probs=66.0

Q ss_pred             EEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcccCCCeEEEEeCCCCh-------hhhcCCCcEEEE
Q 017551           23 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQL-------ENALTGMDLVII   94 (369)
Q Consensus        23 I~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~~~~v~~~~~t~dl-------~~al~~ADiVii   94 (369)
                      ..|+||++++|..++..|++.|.  .|++.|++.. ......+.......++.   ...+.       .+.+-.-|++|.
T Consensus         3 AlVTGas~GiG~aiA~~la~~Ga--~V~i~~r~~~~~~~~~~~~~~~~~~dv~---~~~~~~~~~~~~~~~~G~iDiLVn   77 (252)
T d1zmta1           3 AIVTNVKHFGGMGSALRLSEAGH--TVACHDESFKQKDELEAFAETYPQLKPM---SEQEPAELIEAVTSAYGQVDVLVS   77 (252)
T ss_dssp             EEESSTTSTTHHHHHHHHHHTTC--EEEECCGGGGSHHHHHHHHHHCTTSEEC---CCCSHHHHHHHHHHHHSCCCEEEE
T ss_pred             EEEECCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHhhhCcEEEeccC---CHHHHHHHHHHHHHHcCCCCEEEE
Confidence            56999999999999999999998  9999998762 11111122111112222   12232       234457899999


Q ss_pred             cCCCCC--CC--CCCHH---HHHHHH----HHHHHHHHHHHhhhCCCeEEEEecC
Q 017551           95 PAGVPR--KP--GMTRD---DLFNIN----AGIVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        95 ~ag~p~--k~--g~~r~---~~~~~N----~~i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      .||...  +|  ..+..   ..+..|    ....+.+.+.+.+.. .+.||++|-
T Consensus        78 NAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~IV~isS  131 (252)
T d1zmta1          78 NDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITS  131 (252)
T ss_dssp             ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECC
T ss_pred             CCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccc-cceeecccc
Confidence            887532  33  13322   233444    456677777777664 455666653

>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=94.87  E-value=0.027  Score=47.90  Aligned_cols=103  Identities=15%  Similarity=0.225  Sum_probs=62.9

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCC-CcEEEEEeCCCchhHHHHhhcccCCCeEEEEe---------------------C
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFL---------------------G   78 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~-~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~---------------------~   78 (369)
                      +||.|||- |.-|.+++..+...++ ..+++.+|.|.     .+|.+.....++..-.                     .
T Consensus         1 ~kI~viGv-GGaG~n~v~~l~~~~~~~v~~iainTD~-----~~L~~~~a~~ki~iG~~~t~G~G~g~~p~~g~~aa~e~   74 (194)
T d1w5fa1           1 LKIKVIGV-GGAGNNAINRMIEIGIHGVEFVAVNTDL-----QVLEASNADVKIQIGENITRGLGAGGRPEIGEQAALES   74 (194)
T ss_dssp             CCEEEEEE-HHHHHHHHHHHHHHCCTTEEEEEEESCH-----HHHHTCCCSEEEECCTTTTTTSCCTTCHHHHHHHHHHT
T ss_pred             CeEEEEEe-CchHHHHHHHHHHcCCCceEEEEEcCCH-----HHHhcCCcceEEecccccCCCcccccCchhhHhHHHHH
Confidence            58999999 9999999988877653 34888888874     2233332111111100                     0


Q ss_pred             CCChhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 017551           79 QPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  140 (369)
Q Consensus        79 t~dl~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv  140 (369)
                      .....+.++++|+||++||+.-.-|       .-=++++.++++...    .-.+-++|=|-
T Consensus        75 ~~~I~~~l~~~d~vfi~AGlGGgTG-------tgaapviA~~ake~g----~lvv~ivtlPF  125 (194)
T d1w5fa1          75 EEKIREVLQDTHMVFITAGFGGGTG-------TGASPVIAKIAKEMG----ILTVAIVTTPF  125 (194)
T ss_dssp             HHHHHHHTTTCSEEEEEEETTSSHH-------HHHHHHHHHHHHHTT----CEEEEEEEECC
T ss_pred             HHHHHHHhcCCCeEEEEEecCCCcc-------cchHHHHHHHHHHcC----CceEEEEeech
Confidence            1135677899999999987763222       333566666666532    22355566665

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.86  E-value=0.014  Score=48.56  Aligned_cols=74  Identities=18%  Similarity=0.281  Sum_probs=49.1

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCC---CeEEEEeCCCChhhhcCCCcEE
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG---AVVRGFLGQPQLENALTGMDLV   92 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~---~~v~~~~~t~dl~~al~~ADiV   92 (369)
                      -+.++|.|+|+ |+++.++++.|...+   +|++++++.  ....+.++......   ..+..    .++...+.++|+|
T Consensus        16 ~~~k~vlIlGa-GG~arai~~aL~~~~---~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~dli   87 (177)
T d1nvta1          16 VKDKNIVIYGA-GGAARAVAFELAKDN---NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKF----SGLDVDLDGVDII   87 (177)
T ss_dssp             CCSCEEEEECC-SHHHHHHHHHHTSSS---EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEE----ECTTCCCTTCCEE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHcccc---ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhh----hhhhhccchhhhh
Confidence            45679999999 999999988885433   899999976  33344455433211   12232    2345667899999


Q ss_pred             EEcCCCC
Q 017551           93 IIPAGVP   99 (369)
Q Consensus        93 ii~ag~p   99 (369)
                      |.+-..+
T Consensus        88 In~tp~g   94 (177)
T d1nvta1          88 INATPIG   94 (177)
T ss_dssp             EECSCTT
T ss_pred             ccCCccc
Confidence            9974433

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=94.76  E-value=0.015  Score=50.05  Aligned_cols=34  Identities=15%  Similarity=0.295  Sum_probs=31.1

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ..||+|||| |-.|.++|..|++.|+  +++++|...
T Consensus         4 ~~kV~IiGa-G~aGl~~A~~L~~~G~--~v~v~Er~~   37 (265)
T d2voua1           4 TDRIAVVGG-SISGLTAALMLRDAGV--DVDVYERSP   37 (265)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSS
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHCCC--CEEEEeCCC
Confidence            469999999 9999999999999998  999999753

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=94.70  E-value=0.069  Score=43.73  Aligned_cols=71  Identities=14%  Similarity=0.242  Sum_probs=47.3

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchh--HHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEE
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTGAVVRGFLGQPQLENALTGMDLVII   94 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g--~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii   94 (369)
                      ..+.++|.|+|| |+.+.++++.|...+.  +|.+++++..++  .+..+.+.   ..+....  .+ .....++|+||.
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~al~~~g~--~i~I~nRt~~ka~~l~~~~~~~---~~~~~~~--~~-~~~~~~~dliIN   85 (170)
T d1nyta1          15 IRPGLRILLIGA-GGASRGVLLPLLSLDC--AVTITNRTVSRAEELAKLFAHT---GSIQALS--MD-ELEGHEFDLIIN   85 (170)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSHHHHHHHHHHTGGG---SSEEECC--SG-GGTTCCCSEEEE
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHhcccce--EEEeccchHHHHHHHHHHHhhc---ccccccc--cc-cccccccceeec
Confidence            345679999999 9999999999998886  799999876322  22222221   2344322  11 234578999999


Q ss_pred             cC
Q 017551           95 PA   96 (369)
Q Consensus        95 ~a   96 (369)
                      +-
T Consensus        86 ~T   87 (170)
T d1nyta1          86 AT   87 (170)
T ss_dssp             CC
T ss_pred             cc
Confidence            73

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=94.68  E-value=0.011  Score=50.80  Aligned_cols=33  Identities=21%  Similarity=0.266  Sum_probs=30.9

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      |||+|||| |..|.+.|+.|++.|+  +|.|++...
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~--~V~vlE~~~   33 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGT--DAVLLESSA   33 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTC--CEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCC--CEEEEecCC
Confidence            79999999 9999999999999998  899999865

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=94.65  E-value=0.21  Score=43.18  Aligned_cols=112  Identities=20%  Similarity=0.242  Sum_probs=67.6

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHhhcccCCCeEEEEe-CCCCh----------hhhcC
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQL----------ENALT   87 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~---~~g~~~dL~~~~~~~~v~~~~-~t~dl----------~~al~   87 (369)
                      =|.|+||++++|..++..|+..|.  +|++.|.+.   .+.....+...  ..++..+. .-+|.          .+.+.
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga--~V~i~~~~~~~~~~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   78 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGC--KVLVNYARSAKAAEEVSKQIEAY--GGQAITFGGDVSKEADVEAMMKTAIDAWG   78 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHH--TCEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHHc--CCcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            467889999999999999999998  899988765   22223333321  22333322 11221          22346


Q ss_pred             CCcEEEEcCCCCCC-C--CCC---HHHHHHHH----HHHHHHHHHHHhhhCCCeEEEEecC
Q 017551           88 GMDLVIIPAGVPRK-P--GMT---RDDLFNIN----AGIVRTLCEGIAKCCPNATVNLISN  138 (369)
Q Consensus        88 ~ADiVii~ag~p~k-~--g~~---r~~~~~~N----~~i~~~i~~~i~~~~p~a~viv~tN  138 (369)
                      .-|++|..||.... +  ..+   ....+..|    ....+.+++.|.+. ..+.||++|-
T Consensus        79 ~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~IVnisS  138 (244)
T d1edoa_          79 TIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKK-RKGRIINIAS  138 (244)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred             CCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHc-CCcEEEEEcC
Confidence            78999999986432 2  122   23344555    44556666666654 4677777753

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=94.63  E-value=0.12  Score=44.52  Aligned_cols=153  Identities=17%  Similarity=0.174  Sum_probs=84.2

Q ss_pred             CCCEEEEEcCCC--ccHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHhhcccCCCeEEEEeCCCC----------hhhh
Q 017551           19 AGFKVAILGAAG--GIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQ----------LENA   85 (369)
Q Consensus        19 ~~~KI~IiGA~G--~vGs~la~~l~~~~~~~el~L~D~~~-~~g~~~dL~~~~~~~~v~~~~~t~d----------l~~a   85 (369)
                      +.++|.|+||+|  ++|..++..|+++|.  +|++.|.++ ....+.++............ ...+          ..+.
T Consensus         4 ~gK~~lITGass~~GIG~aiA~~l~~~G~--~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~   80 (258)
T d1qsga_           4 SGKRILVTGVASKLSIAYGIAQAMHREGA--ELAFTYQNDKLKGRVEEFAAQLGSDIVLQC-DVAEDASIDTMFAELGKV   80 (258)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTC--EEEEEESSTTTHHHHHHHHHHTTCCCEEEC-CTTCHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHhhcCCcceeec-ccchHHHHHHHHHHhhhc
Confidence            346899999977  688999999999998  999999987 33333333332211111111 1111          1233


Q ss_pred             cCCCcEEEEcCCCCCCCCC--------C---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCC------CChhHHH
Q 017551           86 LTGMDLVIIPAGVPRKPGM--------T---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPV------NSTVPIA  147 (369)
Q Consensus        86 l~~ADiVii~ag~p~k~g~--------~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv------~~~t~i~  147 (369)
                      +...|++|..++.......        .   ......-|......+.+.+..+- +...++++|...      +..+|-+
T Consensus        81 ~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~~~~~Y~~  160 (258)
T d1qsga_          81 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGL  160 (258)
T ss_dssp             CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHHH
T ss_pred             ccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCCCcHHHHH
Confidence            4566888888765321111        1   12233455555666666665554 344566655322      1122221


Q ss_pred             HHHHHHhCCCCCCcEEEechhcHHHHHHHHHHHhCCCCCCCceeEEe
Q 017551          148 AEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  194 (369)
Q Consensus       148 ae~~~~~~~~~~~kviG~t~Ld~~R~~~~la~~lgv~~~~V~~~viG  194 (369)
                      +    |.              -...+-+.+|..++  ++.|++-.+-
T Consensus       161 s----Ka--------------al~~ltr~lA~el~--~~gIrVN~I~  187 (258)
T d1qsga_         161 A----KA--------------SLEANVRYMANAMG--PEGVRVNAIS  187 (258)
T ss_dssp             H----HH--------------HHHHHHHHHHHHHT--TTTEEEEEEE
T ss_pred             H----HH--------------HHHHHHHHHHHHhC--ccCceeeccc
Confidence            1    11              13346677888885  5678776653

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=94.57  E-value=0.085  Score=45.83  Aligned_cols=114  Identities=14%  Similarity=0.184  Sum_probs=66.3

Q ss_pred             CCEEEEEcCCC--ccHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHhhcccCCC-eEEEEeCCCCh----------hhh
Q 017551           20 GFKVAILGAAG--GIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGA-VVRGFLGQPQL----------ENA   85 (369)
Q Consensus        20 ~~KI~IiGA~G--~vGs~la~~l~~~~~~~el~L~D~~~-~~g~~~dL~~~~~~~-~v~~~~~t~dl----------~~a   85 (369)
                      .+++.|+||+|  ++|..++..|+..|.  +|++.|.++ ....+.++....... .+..  .-+|.          .+.
T Consensus         8 gK~alITGas~~~GIG~aiA~~la~~Ga--~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~--D~~~~~~v~~~~~~~~~~   83 (256)
T d1ulua_           8 GKKALVMGVTNQRSLGFAIAAKLKEAGA--EVALSYQAERLRPEAEKLAEALGGALLFRA--DVTQDEELDALFAGVKEA   83 (256)
T ss_dssp             TCEEEEESCCCSSSHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHHHTTCCEEEEC--CTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCchHHHHHHHHHHHCCC--EEEEEeCcHHHHHHHHHhhhccCccccccc--ccCCHHHHHHHHHHHHHh
Confidence            45899999977  699999999999998  899999887 333333332221111 1111  11221          233


Q ss_pred             cCCCcEEEEcCCCCCCC-------CCCHH---HHHHHHHHHHHHHHHHHhhhC-CCeEEEEec
Q 017551           86 LTGMDLVIIPAGVPRKP-------GMTRD---DLFNINAGIVRTLCEGIAKCC-PNATVNLIS  137 (369)
Q Consensus        86 l~~ADiVii~ag~p~k~-------g~~r~---~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t  137 (369)
                      +-.-|++|..+|.....       ..+..   ..+..|+.-...+++....+- ..+.|+++|
T Consensus        84 ~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~is  146 (256)
T d1ulua_          84 FGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLT  146 (256)
T ss_dssp             HSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEE
T ss_pred             cCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEe
Confidence            45789999998863211       12222   234566655555555544332 346677665

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=94.46  E-value=0.0043  Score=50.11  Aligned_cols=62  Identities=10%  Similarity=0.085  Sum_probs=35.2

Q ss_pred             EEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           23 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        23 I~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      |.+||+ |.||++++..|+....  ...+|+++..  .+.+|.+... .  .    ..+..++++.+|+||++.
T Consensus         2 IgfIG~-G~mg~~l~~~L~~~~~--~~~v~~R~~~--~~~~l~~~~~-~--~----~~~~~~~~~~~DiVil~v   63 (153)
T d2i76a2           2 LNFVGT-GTLTRFFLECLKDRYE--IGYILSRSID--RARNLAEVYG-G--K----AATLEKHPELNGVVFVIV   63 (153)
T ss_dssp             CEEESC-CHHHHHHHHTTC------CCCEECSSHH--HHHHHHHHTC-C--C----CCSSCCCCC---CEEECS
T ss_pred             EEEEeC-cHHHHHHHHHHHhCCC--EEEEEeCChh--hhcchhhccc-c--c----ccchhhhhccCcEEEEec
Confidence            689999 9999999987765443  2346887642  2233333221 1  0    123457899999999985

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=94.39  E-value=0.019  Score=52.02  Aligned_cols=41  Identities=22%  Similarity=0.255  Sum_probs=35.1

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-chhHHH
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTA   62 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-~~g~~~   62 (369)
                      +++||+|||| |..|.+.|..|+++|.  +|.++|.+. .-|.+.
T Consensus         1 k~KKI~IIGa-G~sGL~aA~~L~k~G~--~V~viEk~~~iGG~~~   42 (314)
T d2bi7a1           1 KSKKILIVGA-GFSGAVIGRQLAEKGH--QVHIIDQRDHIGGNSY   42 (314)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTC--EEEEEESSSSSSGGGC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhCCC--CEEEEECCCCCcCeee
Confidence            3579999999 9999999999999887  999999987 455543

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=94.37  E-value=0.018  Score=49.16  Aligned_cols=33  Identities=30%  Similarity=0.475  Sum_probs=30.6

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      +||+|||| |..|.+.|+.|++.|+  +|.++|...
T Consensus         2 KkV~IIGa-G~aGL~aA~~La~~G~--~V~vlE~~~   34 (373)
T d1seza1           2 KRVAVIGA-GVSGLAAAYKLKIHGL--NVTVFEAEG   34 (373)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTSC--EEEEECSSS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCC--CEEEEeCCC
Confidence            59999999 9999999999999998  999999765

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.28  E-value=0.019  Score=47.93  Aligned_cols=35  Identities=17%  Similarity=0.135  Sum_probs=30.2

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      |||+|||| |++|..+|..|...+.-.+|.+++.+.
T Consensus         1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            79999999 999999999998765555999998754

>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.25  E-value=0.045  Score=46.99  Aligned_cols=104  Identities=18%  Similarity=0.271  Sum_probs=61.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCC-CcEEEEEeCCCchhHHHHhhcccCCCeEEEEe------C--------------
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFL------G--------------   78 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~-~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~------~--------------   78 (369)
                      ..||.|||- |+-|..++..+...++ ..+.+.+|.|.     .+|.+.....++..-.      +              
T Consensus        15 ~~ki~ViGv-GGaG~n~v~~l~~~~~~~v~~iainTD~-----~~L~~~~~~~ki~ig~~~t~g~Gag~~p~~g~~aa~e   88 (209)
T d2vapa1          15 KAKITVVGC-GGAGNNTITRLKMEGIEGAKTVAINTDA-----QQLIRTKADKKILIGKKLTRGLGAGGNPKIGEEAAKE   88 (209)
T ss_dssp             CCCEEEEEE-HHHHHHHHHHHHHHTCTTEEEEEEESBH-----HHHHTSCCSEEEECCTTTTTTBCCTTCHHHHHHHHHH
T ss_pred             CCcEEEEEe-CChHHHHHHHHHHcCCCceEEEEEeCCH-----HHHhcCCcchhcccccccccccccccchHHHHHHHHH
Confidence            359999999 9999999988877663 35888889874     2233322111111100      0              


Q ss_pred             -CCChhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 017551           79 -QPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  140 (369)
Q Consensus        79 -t~dl~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv  140 (369)
                       ...+.+.++++|.||++||+.-.   +.    ..=.+++.++++...    .-.+-++|=|-
T Consensus        89 ~~~~I~~~l~~~d~vfi~AGlGGG---TG----sgaapvia~~ake~g----~lvv~ivtlPF  140 (209)
T d2vapa1          89 SAEEIKAAIQDSDMVFITCGLGGG---TG----TGSAPVVAEISKKIG----ALTVAVVTLPF  140 (209)
T ss_dssp             THHHHHHHHTTCSEEEEEEETTSS---HH----HHHHHHHHHHHHHTT----CEEEEEEEECC
T ss_pred             HHHHHHHhccCCCEEEEEEeCCCC---cc----ccHHHHHHHHHHHcC----CcEEEEEecch
Confidence             01355678999999999877632   22    333556555555532    22345556665

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.21  E-value=0.06  Score=44.33  Aligned_cols=96  Identities=16%  Similarity=0.133  Sum_probs=64.7

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV   98 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~   98 (369)
                      ..++++|+|- |.+|..+|..+...+.  .|..+|+++..+... ..+.   -.+      ..+++++..+|+||.+.|.
T Consensus        23 ~Gk~v~V~Gy-G~iG~g~A~~~rg~G~--~V~v~e~dp~~al~A-~~dG---~~v------~~~~~a~~~adivvtaTGn   89 (163)
T d1li4a1          23 AGKVAVVAGY-GDVGKGCAQALRGFGA--RVIITEIDPINALQA-AMEG---YEV------TTMDEACQEGNIFVTTTGC   89 (163)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHHHHHH-HHTT---CEE------CCHHHHTTTCSEEEECSSC
T ss_pred             cCCEEEEecc-ccccHHHHHHHHhCCC--eeEeeecccchhHHh-hcCc---eEe------eehhhhhhhccEEEecCCC
Confidence            4568999999 9999999999998887  999999997443322 1221   111      2367899999999998654


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec-CCCCChh
Q 017551           99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS-NPVNSTV  144 (369)
Q Consensus        99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t-NPv~~~t  144 (369)
                      +.-  ..+               +.+++.-+.+++.+++ -...+-+
T Consensus        90 ~~v--I~~---------------eh~~~MKdgaIL~N~Ghfd~EId~  119 (163)
T d1li4a1          90 IDI--ILG---------------RHFEQMKDDAIVCNIGHFDVEIDV  119 (163)
T ss_dssp             SCS--BCH---------------HHHTTCCTTEEEEECSSSTTSBCH
T ss_pred             ccc--hhH---------------HHHHhccCCeEEEEeccccceecH
Confidence            321  111               3444455678888875 4444433

>d1pj3a1 c.2.1.7 (A:280-573) Mitochondrial NAD(P)-dependent malic enzyme {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Mitochondrial NAD(P)-dependent malic enzyme
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.20  E-value=0.011  Score=53.63  Aligned_cols=107  Identities=21%  Similarity=0.230  Sum_probs=66.6

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHh----CCC-----CcEEEEEeCCCc--hhHHHHhhc--ccCCCeEEEEeCCCChhhhc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKI----NPL-----VSVLHLYDVVNT--PGVTADISH--MDTGAVVRGFLGQPQLENAL   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~----~~~-----~~el~L~D~~~~--~g~~~dL~~--~~~~~~v~~~~~t~dl~~al   86 (369)
                      ..||+|.|| |..|..++.++..    .++     .+.+.++|.+.+  ++..-++..  ..+ .+-.......++.+++
T Consensus        25 d~kiv~~GA-GsAg~gia~ll~~~~~~~g~~~~~a~~~i~lvD~~Glv~~~r~~~~~~~k~~~-a~~~~~~~~~~L~e~i  102 (294)
T d1pj3a1          25 EHKILFLGA-GEAALGIANLIVMSMVENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDSYQEPF-THSAPESIPDTFEDAV  102 (294)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHHHHHTTCCHHHHHHTEEEEETTEECBTTCSSCCCTTTGGG-CBCCCSSCCSSHHHHH
T ss_pred             HcEEEEECc-cHHHHHHHHHHHHHHHhcCCchhhccccEEEEeCCCCccCCCCcccHHHHHHh-hccccccchhHHHHHH
Confidence            469999999 9999998876543    343     257999998761  221111111  111 0100001124677876


Q ss_pred             C--CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCC
Q 017551           87 T--GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS  142 (369)
Q Consensus        87 ~--~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~  142 (369)
                      +  +.|++|-+.|.+.-              +-+++.+.|.+.+++.+|+-.|||..-
T Consensus       103 ~~~kptvliG~S~~~g~--------------ft~evi~~Ma~~~~~PIIFaLSNPt~~  146 (294)
T d1pj3a1         103 NILKPSTIIGVAGAGRL--------------FTPDVIRAMASINERPVIFALSNPTAQ  146 (294)
T ss_dssp             HHHCCSEEEECCCSSCC--------------SCHHHHHHHHHHCSSCEEEECCSSGGG
T ss_pred             HhcCCceEEEecCCCCc--------------CCHHHHHHHHhcCCCcEEEEccCCCCc
Confidence            5  88888887665421              124666778889999999999999753

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=94.16  E-value=0.037  Score=45.83  Aligned_cols=69  Identities=14%  Similarity=0.133  Sum_probs=41.8

Q ss_pred             CCCEEEEEcCCCccHHH-HHHHHHhCCCCcEE-EEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcC--CCcEEEE
Q 017551           19 AGFKVAILGAAGGIGQP-LAMLMKINPLVSVL-HLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLVII   94 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~-la~~l~~~~~~~el-~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~--~ADiVii   94 (369)
                      +++||+|||+ |.+|+. ....+...+...+| .++|.+....  ..+.+..  .....+   +|+++.++  +.|+|++
T Consensus         2 kkirigiIG~-G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~--~~~~~~~--~~~~~~---~~~~ell~~~~id~v~I   73 (181)
T d1zh8a1           2 RKIRLGIVGC-GIAARELHLPALKNLSHLFEITAVTSRTRSHA--EEFAKMV--GNPAVF---DSYEELLESGLVDAVDL   73 (181)
T ss_dssp             CCEEEEEECC-SHHHHHTHHHHHHTTTTTEEEEEEECSSHHHH--HHHHHHH--SSCEEE---SCHHHHHHSSCCSEEEE
T ss_pred             CCcEEEEEcC-CHHHHHHHHHHHHhCCCCeEEEEEEeccHhhh--hhhhccc--ccccee---eeeeccccccccceeec
Confidence            4579999999 999987 46666654433354 4889876322  1222111  111222   46777664  6888998


Q ss_pred             c
Q 017551           95 P   95 (369)
Q Consensus        95 ~   95 (369)
                      +
T Consensus        74 ~   74 (181)
T d1zh8a1          74 T   74 (181)
T ss_dssp             C
T ss_pred             c
Confidence            7

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=94.07  E-value=0.11  Score=42.81  Aligned_cols=98  Identities=14%  Similarity=0.123  Sum_probs=60.0

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcccCCCeEEEEeCCCChhhhc------CCC
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLENAL------TGM   89 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~~~~v~~~~~t~dl~~al------~~A   89 (369)
                      .++.-+|+|+|+ |.+|...+..++..+. ..|+..|.++. ...+.++.-     ...+.....++.+.+      +++
T Consensus        25 ~~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga-~~Vi~~d~~~~r~~~a~~lGa-----~~~i~~~~~~~~~~v~~~t~g~G~   97 (174)
T d1jqba2          25 IEMGSSVVVIGI-GAVGLMGIAGAKLRGA-GRIIGVGSRPICVEAAKFYGA-----TDILNYKNGHIEDQVMKLTNGKGV   97 (174)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHTTTC-SCEEEECCCHHHHHHHHHHTC-----SEEECGGGSCHHHHHHHHTTTSCE
T ss_pred             CCCCCEEEEEcC-Ccchhhhhhhhhcccc-cccccccchhhhHHHHHhhCc-----cccccccchhHHHHHHHHhhccCc
Confidence            455679999998 9999998888887664 37899999872 333444431     111111122333332      469


Q ss_pred             cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC
Q 017551           90 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP  139 (369)
Q Consensus        90 DiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP  139 (369)
                      |+||.+.|.+.               .+.   ..++-..|.+.+++++.|
T Consensus        98 D~vid~~g~~~---------------~~~---~a~~~~~~~G~iv~~G~~  129 (174)
T d1jqba2          98 DRVIMAGGGSE---------------TLS---QAVKMVKPGGIISNINYH  129 (174)
T ss_dssp             EEEEECSSCTT---------------HHH---HHHHHEEEEEEEEECCCC
T ss_pred             ceEEEccCCHH---------------HHH---HHHHHHhcCCEEEEEeec
Confidence            99999987552               111   223333588988887643

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=94.03  E-value=0.14  Score=41.87  Aligned_cols=97  Identities=19%  Similarity=0.172  Sum_probs=59.4

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcccCCCeEEEEeCCCChhh---hc------C
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLEN---AL------T   87 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~~~~v~~~~~t~dl~~---al------~   87 (369)
                      ++.-+|.|+|| |.+|+..+..++..+. ..|+..|.++. ...+.++.     .........++..+   ++      +
T Consensus        27 ~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga-~~Vi~~~~~~~~~~~a~~lG-----a~~vi~~~~~~~~~~~~~i~~~~~~~   99 (182)
T d1vj0a2          27 FAGKTVVIQGA-GPLGLFGVVIARSLGA-ENVIVIAGSPNRLKLAEEIG-----ADLTLNRRETSVEERRKAIMDITHGR   99 (182)
T ss_dssp             CBTCEEEEECC-SHHHHHHHHHHHHTTB-SEEEEEESCHHHHHHHHHTT-----CSEEEETTTSCHHHHHHHHHHHTTTS
T ss_pred             CCCCEEEEECC-Cccchhheeccccccc-cccccccccccccccccccc-----ceEEEeccccchHHHHHHHHHhhCCC
Confidence            44579999998 9999999888888774 48999999872 23334432     11111111233221   11      3


Q ss_pred             CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC
Q 017551           88 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP  139 (369)
Q Consensus        88 ~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP  139 (369)
                      ++|+||.+.|.+.               .+.   ..++-..|.+.++++..+
T Consensus       100 g~Dvvid~vG~~~---------------~~~---~a~~~l~~~G~iv~~G~~  133 (182)
T d1vj0a2         100 GADFILEATGDSR---------------ALL---EGSELLRRGGFYSVAGVA  133 (182)
T ss_dssp             CEEEEEECSSCTT---------------HHH---HHHHHEEEEEEEEECCCC
T ss_pred             CceEEeecCCchh---------------HHH---HHHHHhcCCCEEEEEeec
Confidence            6899999987652               111   223334588888877543

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.01  E-value=0.02  Score=47.09  Aligned_cols=35  Identities=23%  Similarity=0.313  Sum_probs=31.1

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      +.||+|||| |..|...|..|++.|+ ++|.++|...
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~-~~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGY-SDITIFEKQE   38 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTC-CCEEEEESSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCC-CeEEEEEecC
Confidence            469999999 9999999999999986 2589999876

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=93.99  E-value=0.023  Score=45.54  Aligned_cols=35  Identities=23%  Similarity=0.262  Sum_probs=30.5

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      +||+|||| |.+|..+|..|...+.-.+|+|+|.++
T Consensus         3 krivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           3 RKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            59999999 999999999998876545999999876

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.95  E-value=0.029  Score=48.41  Aligned_cols=36  Identities=22%  Similarity=0.225  Sum_probs=32.8

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      +++.||+|||| |.-|.+.|+.|.+.|+  +|.+++...
T Consensus         3 ~~~~kViVIGa-G~aGL~aA~~L~~~G~--~V~VlEa~~   38 (449)
T d2dw4a2           3 KKTGKVIIIGS-GVSGLAAARQLQSFGM--DVTLLEARD   38 (449)
T ss_dssp             SCCCEEEEECC-BHHHHHHHHHHHHTTC--EEEEECSSS
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHhCCC--CEEEEeCCC
Confidence            56679999999 9999999999999998  999999876

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.82  E-value=0.22  Score=43.58  Aligned_cols=113  Identities=17%  Similarity=0.146  Sum_probs=65.6

Q ss_pred             CEE-EEEcCCCccHHHHHHHHHhC-CCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCCh----------hhh
Q 017551           21 FKV-AILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------ENA   85 (369)
Q Consensus        21 ~KI-~IiGA~G~vGs~la~~l~~~-~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl----------~~a   85 (369)
                      ++| .|+||+++||..++..|+.. +.  .|++.+++.  .+..+.+|....  .++..+. .-+|+          .+.
T Consensus         3 ~rVAlVTGas~GIG~a~A~~la~~~g~--~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dvs~~~sv~~~~~~~~~~   78 (275)
T d1wmaa1           3 IHVALVTGGNKGIGLAIVRDLCRLFSG--DVVLTARDVTRGQAAVQQLQAEG--LSPRFHQLDIDDLQSIRALRDFLRKE   78 (275)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHHSSS--EEEEEESSHHHHHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CeEEEECCCCCHHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEEecCCHHHHHHHHHHHHHh
Confidence            567 47799999999999988864 66  899999987  333444554322  2222221 12222          233


Q ss_pred             cCCCcEEEEcCCCCCC-CCC--CH---HHHHHHHHHHHHHHHHHHhhhC-CCeEEEEec
Q 017551           86 LTGMDLVIIPAGVPRK-PGM--TR---DDLFNINAGIVRTLCEGIAKCC-PNATVNLIS  137 (369)
Q Consensus        86 l~~ADiVii~ag~p~k-~g~--~r---~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t  137 (369)
                      +..-|++|..||+... +..  +.   ...+..|.--...+.+.+-..- +.+.+++++
T Consensus        79 ~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnis  137 (275)
T d1wmaa1          79 YGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVS  137 (275)
T ss_dssp             HSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred             cCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc
Confidence            4689999999997432 221  12   2234556555545554444332 345566655

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.61  E-value=0.034  Score=47.71  Aligned_cols=35  Identities=20%  Similarity=0.262  Sum_probs=30.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      |+||+|||| |-.|.++|..|++.|+ ..|.+++...
T Consensus         1 ~~~V~IvGa-G~aGl~~A~~L~~~Gi-~~V~V~Er~~   35 (288)
T d3c96a1           1 PIDILIAGA-GIGGLSCALALHQAGI-GKVTLLESSS   35 (288)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC-SEEEEEESSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCC-CeEEEEeCCC
Confidence            589999999 9999999999999883 2788999865

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=93.56  E-value=0.1  Score=42.67  Aligned_cols=37  Identities=22%  Similarity=0.365  Sum_probs=31.8

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      .+..||.|+|| |+++.++++.|...+. .+|.+++++.
T Consensus        15 ~~~~~vlIlGa-GGaarai~~aL~~~g~-~~I~I~nR~~   51 (167)
T d1npya1          15 NKNAKVIVHGS-GGMAKAVVAAFKNSGF-EKLKIYARNV   51 (167)
T ss_dssp             CTTSCEEEECS-STTHHHHHHHHHHTTC-CCEEEECSCH
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHCCC-CEEEEecccH
Confidence            35679999999 9999999999998874 5899999875

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=93.50  E-value=0.13  Score=44.23  Aligned_cols=76  Identities=16%  Similarity=0.130  Sum_probs=48.5

Q ss_pred             EEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc---hhHHHHhhcccCCCeEEEEeCC---CC-----------hhhh
Q 017551           23 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFLGQ---PQ-----------LENA   85 (369)
Q Consensus        23 I~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~---~g~~~dL~~~~~~~~v~~~~~t---~d-----------l~~a   85 (369)
                      ..|+||++++|..++..|+..|.  +|++.|.+..   +..+.++...............   .+           ..+.
T Consensus         4 AlVTGas~GIG~aia~~la~~G~--~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           4 AVITGGARRIGHSIAVRLHQQGF--RVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             EEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             EEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            36899999999999999999998  9999999862   2333444433211111111111   11           1123


Q ss_pred             cCCCcEEEEcCCCCC
Q 017551           86 LTGMDLVIIPAGVPR  100 (369)
Q Consensus        86 l~~ADiVii~ag~p~  100 (369)
                      +...|++|..||...
T Consensus        82 ~g~iDilvnnAG~~~   96 (266)
T d1mxha_          82 FGRCDVLVNNASAYY   96 (266)
T ss_dssp             HSCCCEEEECCCCCC
T ss_pred             hCCCCEEEECCccCC
Confidence            457999999998643

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=93.49  E-value=0.026  Score=49.21  Aligned_cols=34  Identities=26%  Similarity=0.408  Sum_probs=31.0

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      .||+|+|+ |++|++++..|+..|. .+|+|+|-|.
T Consensus        31 ~~VliiG~-GglGs~va~~La~~Gv-g~i~lvD~D~   64 (247)
T d1jw9b_          31 SRVLIVGL-GGLGCAASQYLASAGV-GNLTLLDFDT   64 (247)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTC-SEEEEECCCB
T ss_pred             CCEEEECC-CHHHHHHHHHHHHcCC-CeEEEECCcc
Confidence            59999999 9999999999999884 6999999876

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=93.48  E-value=0.049  Score=42.04  Aligned_cols=36  Identities=22%  Similarity=0.236  Sum_probs=31.6

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ..+.||+|||| |.+|.-+|..|...+.  ++.|++..+
T Consensus        20 ~~p~~v~IiGg-G~iG~E~A~~l~~~g~--~Vtlv~~~~   55 (117)
T d1onfa2          20 KESKKIGIVGS-GYIAVELINVIKRLGI--DSYIFARGN   55 (117)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHTTTC--EEEEECSSS
T ss_pred             CCCCEEEEECC-chHHHHHHHHHHhccc--cceeeehhc
Confidence            34689999999 9999999999997776  999999865

>d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Malate oxidoreductase (malic enzyme)
species: Thermotoga maritima [TaxId: 2336]

Probab=93.46  E-value=0.19  Score=43.21  Aligned_cols=116  Identities=21%  Similarity=0.236  Sum_probs=74.2

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chh--------HHHHhhcccCCCeEEEEeCCCChhhhcC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPG--------VTADISHMDTGAVVRGFLGQPQLENALT   87 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g--------~~~dL~~~~~~~~v~~~~~t~dl~~al~   87 (369)
                      -+..||++.|| |..|..++..+...+ .+++.++|.+.  ...        ...++.+......     ...++.++++
T Consensus        24 l~d~riv~~GA-GsAg~gia~~l~~~~-~~~i~~~D~~GLi~~~r~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~l~   96 (222)
T d1vl6a1          24 IEEVKVVVNGI-GAAGYNIVKFLLDLG-VKNVVAVDRKGILNENDPETCLNEYHLEIARITNPER-----LSGDLETALE   96 (222)
T ss_dssp             TTTCEEEEECC-SHHHHHHHHHHHHHT-CCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTC-----CCSCHHHHHT
T ss_pred             hhhcEEEEECh-HHHHHHHHHHHHHhc-ccceEeecceeEEEcCcccccccHHHHHHHhhhcchh-----hhcchHhhcc
Confidence            34579999999 999999998887765 36999999975  111        1122222111111     1346789999


Q ss_pred             CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe
Q 017551           88 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  165 (369)
Q Consensus        88 ~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~  165 (369)
                      ++|+++-+..    +|.-+.              +.|.+.+++.+|+=.|||..-..+   +..|.. |   +-+|+.
T Consensus        97 g~~~~~g~~~----~~~~~~--------------e~m~~~~~rPIIFpLSNPt~~~e~---~~a~~~-G---~ai~At  149 (222)
T d1vl6a1          97 GADFFIGVSR----GNILKP--------------EWIKKMSRKPVIFALANPVPEIDP---ELAREA-G---AFIVAT  149 (222)
T ss_dssp             TCSEEEECSC----SSCSCH--------------HHHTTSCSSCEEEECCSSSCSSCH---HHHHHT-T---CSEEEE
T ss_pred             Ccceeccccc----cccccH--------------HHHhhcCCCCEEEecCCCccchhh---hhheec-c---ceEEec
Confidence            9998777642    232111              346677899988888999876664   223443 2   356666

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.43  E-value=0.23  Score=39.82  Aligned_cols=99  Identities=20%  Similarity=0.236  Sum_probs=60.4

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHhhcccCCCeEEEEeCCCChhhh----cCCCcE
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENA----LTGMDL   91 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-~~g~~~dL~~~~~~~~v~~~~~t~dl~~a----l~~ADi   91 (369)
                      .++..+|.|+|+ |.+|...+..++..+.  +++.+|.++ ....+.++.     ..........+..+.    ..+.|.
T Consensus        25 ~~~g~~VlV~Ga-G~vG~~~~~~ak~~G~--~Vi~~~~~~~~~~~a~~~G-----a~~~i~~~~~~~~~~~~~~~~g~~~   96 (166)
T d1llua2          25 ARPGQWVAISGI-GGLGHVAVQYARAMGL--HVAAIDIDDAKLELARKLG-----ASLTVNARQEDPVEAIQRDIGGAHG   96 (166)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHTT-----CSEEEETTTSCHHHHHHHHHSSEEE
T ss_pred             CCCCCEEEEeec-cccHHHHHHHHHHcCC--ccceecchhhHHHhhhccC-----ccccccccchhHHHHHHHhhcCCcc
Confidence            455679999998 9999999998888885  899999986 233333332     111111222343333    345677


Q ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC
Q 017551           92 VIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN  141 (369)
Q Consensus        92 Vii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~  141 (369)
                      +|+..+.+               .   .+-..++-..|.+.+++++.|-+
T Consensus        97 ~i~~~~~~---------------~---~~~~~~~~l~~~G~iv~~G~~~~  128 (166)
T d1llua2          97 VLVTAVSN---------------S---AFGQAIGMARRGGTIALVGLPPG  128 (166)
T ss_dssp             EEECCSCH---------------H---HHHHHHTTEEEEEEEEECCCCSS
T ss_pred             cccccccc---------------h---HHHHHHHHhcCCcEEEEEEecCC
Confidence            77764322               1   12223444458899988876644

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=93.43  E-value=0.093  Score=43.13  Aligned_cols=70  Identities=20%  Similarity=0.208  Sum_probs=48.0

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP   95 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~   95 (369)
                      .+.++|.|+|| |+++.++++.|.+.+  .+|++++++.  ++..+..+...   ..+....  .+ ...+.++|+||.+
T Consensus        16 ~~~k~vlIlGa-GGaarai~~aL~~~~--~~i~I~nR~~~~a~~l~~~~~~~---~~~~~~~--~~-~~~~~~~diiIN~   86 (171)
T d1p77a1          16 RPNQHVLILGA-GGATKGVLLPLLQAQ--QNIVLANRTFSKTKELAERFQPY---GNIQAVS--MD-SIPLQTYDLVINA   86 (171)
T ss_dssp             CTTCEEEEECC-SHHHHTTHHHHHHTT--CEEEEEESSHHHHHHHHHHHGGG---SCEEEEE--GG-GCCCSCCSEEEEC
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHcccC--ceeeeccchHHHHHHHHHHHhhc---cccchhh--hc-cccccccceeeec
Confidence            35679999999 999999999988755  4999999986  23333444321   2333322  11 2357899999998


Q ss_pred             C
Q 017551           96 A   96 (369)
Q Consensus        96 a   96 (369)
                      .
T Consensus        87 t   87 (171)
T d1p77a1          87 T   87 (171)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.42  E-value=0.059  Score=41.20  Aligned_cols=37  Identities=16%  Similarity=0.213  Sum_probs=32.6

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      .+.+.||+|||| |.+|.-+|..+...|.  ++.|++..+
T Consensus        19 ~~~p~~v~IiGg-G~ig~E~A~~l~~~G~--~Vtlve~~~   55 (117)
T d1ebda2          19 GEVPKSLVVIGG-GYIGIELGTAYANFGT--KVTILEGAG   55 (117)
T ss_dssp             SSCCSEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESSS
T ss_pred             hhcCCeEEEECC-Cccceeeeeeeccccc--EEEEEEecc
Confidence            344679999999 9999999999998887  999999776

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=93.39  E-value=0.14  Score=42.90  Aligned_cols=78  Identities=17%  Similarity=0.188  Sum_probs=49.7

Q ss_pred             CCCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcccCCCeEEEEeCCCChhhhc------CC
Q 017551           16 GGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLENAL------TG   88 (369)
Q Consensus        16 ~~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~~~~v~~~~~t~dl~~al------~~   88 (369)
                      ..++...|+|+|| |.+|...+..++..+. ..|+..|.++. ...+.++.     .........+++.+.+      .+
T Consensus        22 ~v~~G~tVlV~Ga-G~vGl~a~~~ak~~ga-~~Vi~~d~~~~rl~~a~~~G-----a~~~~~~~~~~~~~~i~~~t~g~g   94 (195)
T d1kola2          22 GVGPGSTVYVAGA-GPVGLAAAASARLLGA-AVVIVGDLNPARLAHAKAQG-----FEIADLSLDTPLHEQIAALLGEPE   94 (195)
T ss_dssp             TCCTTCEEEEECC-SHHHHHHHHHHHHTTC-SEEEEEESCHHHHHHHHHTT-----CEEEETTSSSCHHHHHHHHHSSSC
T ss_pred             CCCCCCEEEEECc-CHHHHHHHHHHHhhcc-cceeeecccchhhHhhhhcc-----ccEEEeCCCcCHHHHHHHHhCCCC
Confidence            4556679999998 9999888877776663 48999999862 22333221     2222222233443332      47


Q ss_pred             CcEEEEcCCCCC
Q 017551           89 MDLVIIPAGVPR  100 (369)
Q Consensus        89 ADiVii~ag~p~  100 (369)
                      +|++|.+.|.+.
T Consensus        95 ~D~vid~vG~~~  106 (195)
T d1kola2          95 VDCAVDAVGFEA  106 (195)
T ss_dssp             EEEEEECCCTTC
T ss_pred             cEEEEECccccc
Confidence            999999987553

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=93.33  E-value=0.049  Score=41.81  Aligned_cols=36  Identities=31%  Similarity=0.407  Sum_probs=32.2

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      .-+.||+|||| |.+|.-+|..|...+.  ++.+++..+
T Consensus        19 ~~p~~vvIiGg-G~ig~E~A~~l~~~G~--~Vtlve~~~   54 (116)
T d1gesa2          19 ALPERVAVVGA-GYIGVELGGVINGLGA--KTHLFEMFD   54 (116)
T ss_dssp             SCCSEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSS
T ss_pred             hCCCEEEEECC-ChhhHHHHHHhhcccc--EEEEEeecc
Confidence            34679999999 9999999999998887  999999876

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=93.32  E-value=0.056  Score=41.95  Aligned_cols=36  Identities=22%  Similarity=0.302  Sum_probs=32.2

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      .+..+|+|||| |.+|.-+|..|...+.  ++.|++..+
T Consensus        28 ~~~~~vvIIGg-G~iG~E~A~~l~~~g~--~Vtli~~~~   63 (121)
T d1d7ya2          28 RPQSRLLIVGG-GVIGLELAATARTAGV--HVSLVETQP   63 (121)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESSS
T ss_pred             hcCCeEEEECc-chhHHHHHHHhhcccc--eEEEEeecc
Confidence            34579999999 9999999999999987  999999876

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=93.29  E-value=0.34  Score=41.95  Aligned_cols=112  Identities=19%  Similarity=0.205  Sum_probs=62.9

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHhhcccCCCeEEEEe-CCCCh----------hhhc
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQL----------ENAL   86 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~---~~g~~~dL~~~~~~~~v~~~~-~t~dl----------~~al   86 (369)
                      +.+.|+||++.||..++..|+..|.  +|++.+.+.   .+.....+....  .++..+. .-+|.          .+.+
T Consensus         7 K~alITGas~GIG~aia~~la~~G~--~Vvi~~~~~~~~~~~~~~~~~~~g--~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           7 KVALTTGAGRGIGRGIAIELGRRGA--SVVVNYGSSSKAAEEVVAELKKLG--AQGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCC--EEEEEcCCChHHHHHHHHHHHHcC--CCceEecCCCCCHHHHHHHHHHHHHHc
Confidence            4788999999999999999999998  888866544   222333343322  2333221 11221          2234


Q ss_pred             CCCcEEEEcCCCCC-CCC--CC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEe
Q 017551           87 TGMDLVIIPAGVPR-KPG--MT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLI  136 (369)
Q Consensus        87 ~~ADiVii~ag~p~-k~g--~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~  136 (369)
                      -.-|++|..+|... .+-  .+   ....+..|+.-...+.+.+..+. .++.++++
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii  139 (259)
T d1ja9a_          83 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILT  139 (259)
T ss_dssp             SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccc
Confidence            57899999988643 221  22   23445556544434444433332 23444444

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.07  E-value=0.068  Score=41.46  Aligned_cols=36  Identities=19%  Similarity=0.265  Sum_probs=32.0

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      .+..+|+|||| |.+|.-+|..|...+.  ++.+++..+
T Consensus        28 ~~~k~vvViGg-G~iG~E~A~~l~~~g~--~Vtlie~~~   63 (123)
T d1nhpa2          28 PEVNNVVVIGS-GYIGIEAAEAFAKAGK--KVTVIDILD   63 (123)
T ss_dssp             TTCCEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESSS
T ss_pred             cCCCEEEEECC-hHHHHHHHHHhhccce--EEEEEEecC
Confidence            34579999999 9999999999999987  999998865

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.02  E-value=0.75  Score=40.38  Aligned_cols=114  Identities=14%  Similarity=0.188  Sum_probs=62.2

Q ss_pred             CEEEEE-cCCCccHHHHHHHHHhCCCCcEEEEEeC---CC-chhHHHHh-hccc-CCCeEEEEe-CCCChhh---h----
Q 017551           21 FKVAIL-GAAGGIGQPLAMLMKINPLVSVLHLYDV---VN-TPGVTADI-SHMD-TGAVVRGFL-GQPQLEN---A----   85 (369)
Q Consensus        21 ~KI~Ii-GA~G~vGs~la~~l~~~~~~~el~L~D~---~~-~~g~~~dL-~~~~-~~~~v~~~~-~t~dl~~---a----   85 (369)
                      +||++| ||+++||..++..|+..|.  .+++++.   +. ......+. .... ...++..+. .-+|.++   +    
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga--~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~   79 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPS--QSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERV   79 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTT--CCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTC
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCC--CeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhc
Confidence            477755 9999999999999999885  4444443   22 11111111 1111 123444332 2233211   1    


Q ss_pred             -cCCCcEEEEcCCCCCCCC---CC---HHHHHHHHH----HHHHHHHHHHhhhCCCeEEEEec
Q 017551           86 -LTGMDLVIIPAGVPRKPG---MT---RDDLFNINA----GIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        86 -l~~ADiVii~ag~p~k~g---~~---r~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                       -...|++|..+|......   .+   ....+..|+    ...+.+.+.|.+.. .+.||++|
T Consensus        80 ~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~-~G~Iv~is  141 (285)
T d1jtva_          80 TEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTG  141 (285)
T ss_dssp             TTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEE
T ss_pred             cccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcC-CCceEEEe
Confidence             146899999988644321   22   233445554    45667777777654 46566664

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=92.91  E-value=0.037  Score=47.94  Aligned_cols=33  Identities=18%  Similarity=0.401  Sum_probs=30.2

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      .-|+|||| |-+|.++|+.|++++.  +|+++|.+.
T Consensus         5 ~DvvIIGa-Gi~Gls~A~~La~~G~--~V~vlE~~~   37 (276)
T d1ryia1           5 YEAVVIGG-GIIGSAIAYYLAKENK--NTALFESGT   37 (276)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSS
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCC--cEEEEeCCC
Confidence            35999999 9999999999999997  999999865

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.87  E-value=0.26  Score=39.28  Aligned_cols=118  Identities=17%  Similarity=0.191  Sum_probs=67.2

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcccCCCeEEEEeCCCChh----hhcCCCcE
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLE----NALTGMDL   91 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~~~~v~~~~~t~dl~----~al~~ADi   91 (369)
                      .++..+|.|.|+ |.+|...+..++..+.  +++..|.++. ...+.++.     ..........|+.    +...+.|.
T Consensus        25 ~~~g~~vlv~G~-G~iG~~a~~~a~~~g~--~v~~~~~~~~r~~~~k~~G-----a~~~~~~~~~~~~~~~~~~~~~~~~   96 (168)
T d1rjwa2          25 AKPGEWVAIYGI-GGLGHVAVQYAKAMGL--NVVAVDIGDEKLELAKELG-----ADLVVNPLKEDAAKFMKEKVGGVHA   96 (168)
T ss_dssp             CCTTCEEEEECC-STTHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHTT-----CSEEECTTTSCHHHHHHHHHSSEEE
T ss_pred             CCCCCEEEEeec-ccchhhhhHHHhcCCC--eEeccCCCHHHhhhhhhcC-----cceecccccchhhhhcccccCCCce
Confidence            455679999998 9999998888888887  8999998762 22333221     1111111123332    33467788


Q ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChh-HHHHHHHHHhCCCCCCcEEEec
Q 017551           92 VIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTV-PIAAEVFKKAGTYDPKKLLGVT  166 (369)
Q Consensus        92 Vii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t-~i~ae~~~~~~~~~~~kviG~t  166 (369)
                      +|+.++.+               ..+.   ..++...|.+.++++..|.+-.. ... ..+.+     ..+++|..
T Consensus        97 ~v~~~~~~---------------~~~~---~a~~~l~~~G~i~~~g~~~~~~~~~~~-~~~~~-----~~~i~gs~  148 (168)
T d1rjwa2          97 AVVTAVSK---------------PAFQ---SAYNSIRRGGACVLVGLPPEEMPIPIF-DTVLN-----GIKIIGSI  148 (168)
T ss_dssp             EEESSCCH---------------HHHH---HHHHHEEEEEEEEECCCCSSEEEEEHH-HHHHT-----TCEEEECC
T ss_pred             EEeecCCH---------------HHHH---HHHHHhccCCceEecccccCCCCCCHH-HHHHC-----CcEEEEEe
Confidence            88875422               1122   22333358898888866554322 211 22222     25788874

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.74  E-value=0.086  Score=47.90  Aligned_cols=69  Identities=10%  Similarity=0.056  Sum_probs=47.9

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP   95 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~   95 (369)
                      ....++|||+ |..+...+..+...-.+.+|.+||.+.  ....+.++.+..  ..+..     +..+++.+||+|+.+
T Consensus       124 ~~~~l~iiGa-G~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~--~~~~~-----~~~~a~~~aDiV~ta  194 (320)
T d1omoa_         124 NSSVFGFIGC-GTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRG--ISASV-----QPAEEASRCDVLVTT  194 (320)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTT--CCEEE-----CCHHHHTSSSEEEEC
T ss_pred             CccEEEEecC-cccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcC--Ccccc-----chhhhhccccEEEEe
Confidence            3468999999 988887777666544478999999987  344455555432  23332     225789999999875

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=92.73  E-value=0.071  Score=41.98  Aligned_cols=36  Identities=22%  Similarity=0.318  Sum_probs=32.4

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ..+.||+|||| |.+|.-+|..|...+.  ++.+++...
T Consensus        33 ~~~k~v~VIGg-G~iG~E~A~~l~~~g~--~Vtvie~~~   68 (133)
T d1q1ra2          33 IADNRLVVIGG-GYIGLEVAATAIKANM--HVTLLDTAA   68 (133)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSS
T ss_pred             ccCCEEEEECC-chHHHHHHHHHHhhCc--ceeeeeecc
Confidence            44579999999 9999999999999887  999999876

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=92.66  E-value=0.052  Score=46.84  Aligned_cols=33  Identities=21%  Similarity=0.292  Sum_probs=29.6

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      -|.|+||+++||..++..|+..|.  +|++.|+++
T Consensus         3 VvlITGas~GIG~aiA~~la~~Ga--~V~~~~~~~   35 (257)
T d1fjha_           3 IIVISGCATGIGAATRKVLEAAGH--QIVGIDIRD   35 (257)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCh
Confidence            347779999999999999999998  999999876

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.64  E-value=0.07  Score=41.35  Aligned_cols=36  Identities=14%  Similarity=0.181  Sum_probs=32.1

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      +-+.|++|||| |.+|.-+|..|...+.  ++.+++..+
T Consensus        21 ~~p~~~vIiG~-G~ig~E~A~~l~~lG~--~Vtii~~~~   56 (122)
T d1v59a2          21 EIPKRLTIIGG-GIIGLEMGSVYSRLGS--KVTVVEFQP   56 (122)
T ss_dssp             SCCSEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSS
T ss_pred             cCCCeEEEECC-CchHHHHHHHHHhhCc--ceeEEEecc
Confidence            34679999999 9999999999998887  999999866

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=92.52  E-value=0.65  Score=39.74  Aligned_cols=36  Identities=17%  Similarity=0.143  Sum_probs=31.1

Q ss_pred             CCCEEEEEcCCC--ccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           19 AGFKVAILGAAG--GIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        19 ~~~KI~IiGA~G--~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      +.+++.|+||+|  ++|..+|..|+..|.  +|+|.+.+.
T Consensus         5 ~gK~~lItGaag~~GIG~aiA~~la~~Ga--~Vil~~~~~   42 (268)
T d2h7ma1           5 DGKRILVSGIITDSSIAFHIARVAQEQGA--QLVLTGFDR   42 (268)
T ss_dssp             TTCEEEECCCSSTTCHHHHHHHHHHHTTC--EEEEEECSC
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHcCC--EEEEEeCCh
Confidence            456899999765  499999999999998  999999886

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=92.50  E-value=0.63  Score=39.83  Aligned_cols=118  Identities=17%  Similarity=0.117  Sum_probs=69.4

Q ss_pred             CCCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-----chhHHHHhhcccCCCeEEEEeC-CCChh---h--
Q 017551           16 GGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-----TPGVTADISHMDTGAVVRGFLG-QPQLE---N--   84 (369)
Q Consensus        16 ~~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-----~~g~~~dL~~~~~~~~v~~~~~-t~dl~---~--   84 (369)
                      .+++..-|.|+||+|+||..++..|+++|. ..|+|+..+.     ......++...  ..++..+.. -+|..   +  
T Consensus         5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga-~~vvl~~R~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dv~d~~~~~~~~   81 (259)
T d2fr1a1           5 EWKPTGTVLVTGGTGGVGGQIARWLARRGA-PHLLLVSRSGPDADGAGELVAELEAL--GARTTVAACDVTDRESVRELL   81 (259)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTC-SEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHH
T ss_pred             ccCCcCEEEEECCCcHHHHHHHHHHHHCCC-CEEEEEeCCccCHHHHHHHHHHHHhc--cccccccccccchHHHHHHhh
Confidence            356667899999999999999999999885 3688886543     22333344332  344554321 22211   1  


Q ss_pred             -hc---CCCcEEEEcCCCCCCCC---CCH---HHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551           85 -AL---TGMDLVIIPAGVPRKPG---MTR---DDLFNINAGIVRTLCEGIAKCCPNATVNLIS  137 (369)
Q Consensus        85 -al---~~ADiVii~ag~p~k~g---~~r---~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  137 (369)
                       .+   -..|.||..+|......   ++.   ...+..|+.....+.+.+... +.+.++++|
T Consensus        82 ~~i~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~-~~~~iv~~S  143 (259)
T d2fr1a1          82 GGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-DLTAFVLFS  143 (259)
T ss_dssp             HTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-CCSEEEEEE
T ss_pred             ccccccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhcc-CCceEeeec
Confidence             12   24788888888654321   232   223456666666666665544 344555554

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.43  E-value=0.11  Score=44.69  Aligned_cols=44  Identities=23%  Similarity=0.264  Sum_probs=35.8

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHh
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADI   64 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL   64 (369)
                      +.+.+.|+||++++|..++..|+..|.  .|++.|+++  +...+.++
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~l   49 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGA--SAVLLDLPNSGGEAQAKKL   49 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECTTSSHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHh
Confidence            445678999999999999999999998  999999987  33344444

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=92.41  E-value=0.072  Score=47.95  Aligned_cols=36  Identities=25%  Similarity=0.275  Sum_probs=31.6

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      .+||+|||| |..|.+.|..|+..+...++++++...
T Consensus         4 ~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~   39 (335)
T d2gv8a1           4 IRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRG   39 (335)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence            358999999 999999999888877666999999986

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.39  E-value=0.059  Score=41.85  Aligned_cols=37  Identities=14%  Similarity=-0.069  Sum_probs=31.6

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      .+.+.|++|||| |.+|.-+|..+...+.  +|.++..+.
T Consensus        17 ~~~P~~vvIIGg-G~iG~E~A~~l~~lG~--~Vtii~~~~   53 (122)
T d1h6va2          17 PYCPGKTLVVGA-SYVALECAGFLAGIGL--DVTVMVRSI   53 (122)
T ss_dssp             SSCCCSEEEECC-SHHHHHHHHHHHHTTC--CEEEEESSS
T ss_pred             ccCCCeEEEECC-CccHHHHHHHHhhcCC--eEEEEEech
Confidence            345679999999 9999999999998886  888888665

>d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.33  E-value=0.19  Score=42.56  Aligned_cols=102  Identities=21%  Similarity=0.307  Sum_probs=63.2

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCC-CcEEEEEeCCCchhHHHHhhcccCCCeEE-------EE--------------eCC
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVR-------GF--------------LGQ   79 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~-~~el~L~D~~~~~g~~~dL~~~~~~~~v~-------~~--------------~~t   79 (369)
                      +|.|||- |..|.+++..+...++ ..+++.+|.|.     .+|.......++.       ..              ...
T Consensus         3 ~IkViGv-GGaG~n~vn~~~~~~~~~v~~iainTD~-----~~L~~~~~~~ki~iG~~~t~G~Gagg~p~~g~~aa~e~~   76 (198)
T d1rq2a1           3 VIKVVGI-GGGGVNAVNRMIEQGLKGVEFIAINTDA-----QALLMSDADVKLDVGRDSTRGLGAGADPEVGRKAAEDAK   76 (198)
T ss_dssp             CEEEEEE-HHHHHHHHHHHHHTTCCSEEEEEEESCH-----HHHHHCCCSEEEECCTTTC-----CCCHHHHHHHHHHTH
T ss_pred             eEEEEEe-CchHHHHHHHHHHcCCCCceEEEEcchH-----HHHhcCCcchhhccccccccCCCcCcChhhhHhhHHHHH
Confidence            7889999 9999999998888764 34788888774     1122221111111       10              001


Q ss_pred             CChhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 017551           80 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  140 (369)
Q Consensus        80 ~dl~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv  140 (369)
                      ..+.++++++|+||++||+.-.-|       .-=+|++.++++...    --.+-++|-|-
T Consensus        77 ~~I~~~l~~~d~vfi~AGlGGgTG-------tGaaPviA~iake~g----~l~v~ivt~PF  126 (198)
T d1rq2a1          77 DEIEELLRGADMVFVTAGEGGGTG-------TGGAPVVASIARKLG----ALTVGVVTRPF  126 (198)
T ss_dssp             HHHHHHHTTCSEEEEEEETTSSHH-------HHHHHHHHHHHHHHT----CEEEEEEEECC
T ss_pred             HHHHHHhcCCCEEEEEEecCCCCC-------cchHHHHHHHHHHcC----CcEEEEEecCh
Confidence            235678999999999998763222       333677777777653    22355667675

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=92.32  E-value=0.094  Score=44.87  Aligned_cols=73  Identities=16%  Similarity=0.098  Sum_probs=43.2

Q ss_pred             CCCCEEEEEcCCCccHHH-HHHHHHhCCCCcEEEEEeCCCch--hHHHHhhcccCCCeEEEEeCCCChhhhcC--CCcEE
Q 017551           18 AAGFKVAILGAAGGIGQP-LAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQPQLENALT--GMDLV   92 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~-la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~~~~~~v~~~~~t~dl~~al~--~ADiV   92 (369)
                      .++.||+|||+ |.+|.. +...+...+.+.-+.++|++...  ..+.++. .. ...+..   .+|+++.++  +.|+|
T Consensus        31 ~~~iriaiIG~-G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~-i~-~~~~~~---~~d~~ell~~~~iD~V  104 (221)
T d1h6da1          31 DRRFGYAIVGL-GKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYG-VD-PRKIYD---YSNFDKIAKDPKIDAV  104 (221)
T ss_dssp             CCCEEEEEECC-SHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTT-CC-GGGEEC---SSSGGGGGGCTTCCEE
T ss_pred             CCCEEEEEEcC-cHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhc-cc-cccccc---cCchhhhcccccceee
Confidence            35579999999 999974 55555554444334599998622  2222221 11 123333   356766664  68899


Q ss_pred             EEcC
Q 017551           93 IIPA   96 (369)
Q Consensus        93 ii~a   96 (369)
                      +++.
T Consensus       105 ~I~t  108 (221)
T d1h6da1         105 YIIL  108 (221)
T ss_dssp             EECS
T ss_pred             eecc
Confidence            9873

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=92.30  E-value=0.051  Score=44.83  Aligned_cols=33  Identities=21%  Similarity=0.333  Sum_probs=29.5

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ||+|||| |-.|.+.|+.|.+.|+ .+|+++|...
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~-~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGI-TDLLILEATD   34 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTC-CCEEEECSSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCC-CcEEEEECCC
Confidence            8999999 9999999999999984 2699999875

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.08  E-value=0.084  Score=45.06  Aligned_cols=36  Identities=28%  Similarity=0.327  Sum_probs=32.7

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ....||+|||| |..|.+.|..|++.++  ++.|+|...
T Consensus        47 ~~~k~VvIIGa-GpAGl~aA~~l~~~G~--~v~l~E~~~   82 (233)
T d1djqa3          47 KNKDSVLIVGA-GPSGSEAARVLMESGY--TVHLTDTAE   82 (233)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSS
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHHHhcc--ceeeEeecc
Confidence            44679999999 9999999999999998  999999876

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.04  E-value=0.039  Score=46.64  Aligned_cols=37  Identities=14%  Similarity=0.147  Sum_probs=31.2

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCC-----CcEEEEEeCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPL-----VSVLHLYDVVN   56 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~-----~~el~L~D~~~   56 (369)
                      |++||+|||| |--|.+.|..|+..++     .-+|.+||...
T Consensus         1 rp~~VaVIGa-GpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~   42 (239)
T d1lqta2           1 RPYYIAIVGS-GPSAFFAAASLLKAADTTEDLDMAVDMLEMLP   42 (239)
T ss_dssp             CCEEEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEEEEESSS
T ss_pred             CCcEEEEECc-CHHHHHHHHHHHHcCCccccCCCceEEEecCC
Confidence            5679999999 9999999999987652     23899999876

>d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.93  E-value=0.1  Score=44.27  Aligned_cols=102  Identities=19%  Similarity=0.307  Sum_probs=62.3

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCC-CcEEEEEeCCCchhHHHHhhcccCCCeEEE---------------------EeCC
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRG---------------------FLGQ   79 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~-~~el~L~D~~~~~g~~~dL~~~~~~~~v~~---------------------~~~t   79 (369)
                      +|.|||- |..|.+++..+...++ .-+++.+|.|.     .+|.......++..                     ....
T Consensus         3 ~IkViGv-GGaG~n~v~~~~~~~~~~v~~iainTD~-----~~L~~~~~~~ki~iG~~~~~g~G~gg~p~~g~~aa~e~~   76 (198)
T d1ofua1           3 VIKVIGV-GGGGGNAVNHMAKNNVEGVEFICANTDA-----QALKNIAARTVLQLGPGVTKGLGAGANPEVGRQAALEDR   76 (198)
T ss_dssp             CEEEEEE-HHHHHHHHHHHHHTTCCSEEEEEEESBT-----GGGSSCSCSEEEECCHHHHTTBCCCSCHHHHHHHHHHTH
T ss_pred             eEEEEEE-CchHHHHHHHHHHcCCCCeEEEEEeCcH-----HHHhcCCccceeccccccccCCCCCCChHHHHHHHHHHH
Confidence            7899999 9999999998888764 34888888875     11222111111110                     0001


Q ss_pred             CChhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 017551           80 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  140 (369)
Q Consensus        80 ~dl~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv  140 (369)
                      ..+.+.++++|+||++||+--.-|       ..=+|++.++++...    --.+-++|=|-
T Consensus        77 ~~I~~~l~~~d~vfi~AGlGGGTG-------tgaapviA~~ake~g----~lvvaivtlPF  126 (198)
T d1ofua1          77 ERISEVLEGADMVFITTGMGGGTG-------TGAAPIIAEVAKEMG----ILTVAVVTRPF  126 (198)
T ss_dssp             HHHHHHHTTCSEEEEEEETTSSHH-------HHHHHHHHHHHHHTT----CEEEEEEEECC
T ss_pred             HHHHHHhCCCCeEEEEecCCCCcc-------ccHHHHHHHHHHHcC----CCEEEEEecch
Confidence            224577899999999998763222       334667666666532    23355666665

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=91.92  E-value=0.4  Score=39.11  Aligned_cols=102  Identities=16%  Similarity=0.164  Sum_probs=63.5

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHhhcccCCCeEEEEeCCC-Chhh-----hcCCC
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQP-QLEN-----ALTGM   89 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-~~g~~~dL~~~~~~~~v~~~~~t~-dl~~-----al~~A   89 (369)
                      .++..+|+|+|+ |.+|...+..++..+. ..|+..|.++ ....+.++...    .+....... ..+.     .=.++
T Consensus        26 v~~G~~VlV~G~-G~iGl~a~~~ak~~Ga-~~Vi~~d~~~~r~~~a~~~Ga~----~~i~~~~~~~~~~~~~~~~~~~G~   99 (174)
T d1e3ia2          26 VTPGSTCAVFGL-GCVGLSAIIGCKIAGA-SRIIAIDINGEKFPKAKALGAT----DCLNPRELDKPVQDVITELTAGGV   99 (174)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTC-SEEEEECSCGGGHHHHHHTTCS----EEECGGGCSSCHHHHHHHHHTSCB
T ss_pred             CCCCCEEEEECC-ChHHHHHHHHHHHhCC-ceeeeeccchHHHHHHHHhCCC----cccCCccchhhhhhhHhhhhcCCC
Confidence            455679999998 9999999998888873 4789999987 33444544321    111111011 1111     12789


Q ss_pred             cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCC-eEEEEecCCCCC
Q 017551           90 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPN-ATVNLISNPVNS  142 (369)
Q Consensus        90 DiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~-a~viv~tNPv~~  142 (369)
                      |+||.+.|.+.                  .+-..++-..|. +.++++..|.+-
T Consensus       100 d~vie~~G~~~------------------~~~~a~~~~~~g~G~~v~vG~~~~~  135 (174)
T d1e3ia2         100 DYSLDCAGTAQ------------------TLKAAVDCTVLGWGSCTVVGAKVDE  135 (174)
T ss_dssp             SEEEESSCCHH------------------HHHHHHHTBCTTTCEEEECCCSSSE
T ss_pred             cEEEEecccch------------------HHHHHHHHhhcCCeEEEecCCCCCc
Confidence            99999987551                  122333334574 788888887653

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.90  E-value=0.047  Score=45.95  Aligned_cols=34  Identities=24%  Similarity=0.330  Sum_probs=27.6

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCC----CcEEEEEeCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPL----VSVLHLYDVV   55 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~----~~el~L~D~~   55 (369)
                      |||+|||| |-+|.+.|+.|++++.    +.++.+++..
T Consensus         1 mkV~VIGa-Gi~GlstA~~L~~~G~~v~v~e~~~i~~~~   38 (246)
T d1kifa1           1 MRVVVIGA-GVIGLSTALCIHERYHSVLQPLDVKVYADR   38 (246)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHHTTTSSSCEEEEEESC
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCCceEEeeeeecccC
Confidence            79999999 9999999999998753    3466666643

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=91.83  E-value=0.071  Score=45.10  Aligned_cols=35  Identities=14%  Similarity=0.194  Sum_probs=29.6

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      .||+|||| |-.|.+.|..|.+.+...+|.+||...
T Consensus         2 ~kv~iIGa-GpaGl~aA~~L~~~~~~~~V~v~e~~~   36 (230)
T d1cjca2           2 PQICVVGS-GPAGFYTAQHLLKHHSRAHVDIYEKQL   36 (230)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSSCEEEEECSSS
T ss_pred             CeEEEECc-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            49999999 999999999887764434999999876

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=91.80  E-value=0.71  Score=39.42  Aligned_cols=102  Identities=15%  Similarity=0.160  Sum_probs=58.1

Q ss_pred             CEEEEEcCCCccHHHHHHHHHh---CCCCcEEEEEeCCCchh-HHHHhhcccCCCeEEEEe-CCCC---hhhh-------
Q 017551           21 FKVAILGAAGGIGQPLAMLMKI---NPLVSVLHLYDVVNTPG-VTADISHMDTGAVVRGFL-GQPQ---LENA-------   85 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~---~~~~~el~L~D~~~~~g-~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------   85 (369)
                      +.|.|+||+++||..++..|+.   .+.  .|++.+.++... ...++...  ..++..+. .-+|   .+++       
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~--~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dvs~~~~v~~~~~~i~~~   78 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQ--HLFTTCRNREQAKELEDLAKN--HSNIHILEIDLRNFDAYDKLVADIEGV   78 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCS--EEEEEESCTTSCHHHHHHHHH--CTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHhc--CCcEEEEEEEeccHHHHHHHHhhhHHH
Confidence            4699999999999999988764   455  999999987222 22233222  12333322 1112   2111       


Q ss_pred             --cCCCcEEEEcCCCCCCCC----CCH---HHHHHHHH----HHHHHHHHHHhh
Q 017551           86 --LTGMDLVIIPAGVPRKPG----MTR---DDLFNINA----GIVRTLCEGIAK  126 (369)
Q Consensus        86 --l~~ADiVii~ag~p~k~g----~~r---~~~~~~N~----~i~~~i~~~i~~  126 (369)
                        ...-|++|..||+....+    .+.   ...+..|.    ...+.+.+.+.+
T Consensus        79 ~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~  132 (248)
T d1snya_          79 TKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKK  132 (248)
T ss_dssp             HGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             hhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHH
Confidence              245899999998743322    222   23444553    344455555554

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=91.79  E-value=0.096  Score=39.90  Aligned_cols=37  Identities=16%  Similarity=0.222  Sum_probs=32.4

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ...+.|++|||| |.+|.-+|..|...+.  ++.|++..+
T Consensus        18 ~~~p~~vvIiGg-G~~G~E~A~~l~~~g~--~Vtlve~~~   54 (115)
T d1lvla2          18 KALPQHLVVVGG-GYIGLELGIAYRKLGA--QVSVVEARE   54 (115)
T ss_dssp             SSCCSEEEEECC-SHHHHHHHHHHHHHTC--EEEEECSSS
T ss_pred             ccCCCeEEEECC-CHHHHHHHHHHhhccc--ceEEEeeec
Confidence            344679999999 9999999999998887  999999865

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=91.79  E-value=0.14  Score=41.86  Aligned_cols=97  Identities=18%  Similarity=0.216  Sum_probs=57.4

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP   95 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~   95 (369)
                      .++..+|.|.||+|.+|+.....++..+.  +++..+.++. ...+.++.   . ..+..+....+....-+++|+|+-+
T Consensus        25 ~~~g~~VlI~ga~G~vG~~aiqlak~~G~--~vi~~~~~~~~~~~~~~lG---a-~~~i~~~~~~~~~~~~~g~D~v~d~   98 (171)
T d1iz0a2          25 ARPGEKVLVQAAAGALGTAAVQVARAMGL--RVLAAASRPEKLALPLALG---A-EEAATYAEVPERAKAWGGLDLVLEV   98 (171)
T ss_dssp             CCTTCEEEESSTTBHHHHHHHHHHHHTTC--EEEEEESSGGGSHHHHHTT---C-SEEEEGGGHHHHHHHTTSEEEEEEC
T ss_pred             CCCCCEEEEEeccccchhhhhhhhccccc--ccccccccccccccccccc---c-ceeeehhhhhhhhhccccccccccc
Confidence            45667999999889999999998888887  7777776552 22222222   1 1222111001112345789999987


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC
Q 017551           96 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP  139 (369)
Q Consensus        96 ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP  139 (369)
                      .| +     +    +          -..++-..|.+.++.+.+|
T Consensus        99 ~G-~-----~----~----------~~~~~~l~~~G~~v~~G~~  122 (171)
T d1iz0a2          99 RG-K-----E----V----------EESLGLLAHGGRLVYIGAA  122 (171)
T ss_dssp             SC-T-----T----H----------HHHHTTEEEEEEEEEC---
T ss_pred             cc-h-----h----H----------HHHHHHHhcCCcEEEEeCC
Confidence            65 1     0    1          1234444588988888654

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=91.77  E-value=0.67  Score=37.00  Aligned_cols=99  Identities=13%  Similarity=0.036  Sum_probs=58.9

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcccCCCeEEEEeCCCChhhhc------CCC
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLENAL------TGM   89 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~~~~v~~~~~t~dl~~al------~~A   89 (369)
                      .++.-+|.|+|++|.+|...+..++..+. .+|+..|.++. ...+.++.     ..........|+.+.+      ++.
T Consensus        25 ~~~g~~vlV~G~~G~vG~~~~~~~~~~g~-~~V~~~~~~~~~~~~~~~~G-----a~~~i~~~~~~~~~~~~~~~~~~~~   98 (170)
T d1jvba2          25 LDPTKTLLVVGAGGGLGTMAVQIAKAVSG-ATIIGVDVREEAVEAAKRAG-----ADYVINASMQDPLAEIRRITESKGV   98 (170)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHTC-CEEEEEESSHHHHHHHHHHT-----CSEEEETTTSCHHHHHHHHTTTSCE
T ss_pred             CCCCCEEEEEeccccceeeeeeccccccc-ccccccccchhhHHHHHHcC-----CceeeccCCcCHHHHHHHHhhcccc
Confidence            44556999999879999988887776663 38999998862 22333332     1112111223433332      468


Q ss_pred             cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC
Q 017551           90 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP  139 (369)
Q Consensus        90 DiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP  139 (369)
                      |+|+.+.|.+.               .+.   ..++-..|.+.+++++.+
T Consensus        99 d~vid~~g~~~---------------~~~---~a~~~l~~~G~iv~~G~~  130 (170)
T d1jvba2          99 DAVIDLNNSEK---------------TLS---VYPKALAKQGKYVMVGLF  130 (170)
T ss_dssp             EEEEESCCCHH---------------HHT---TGGGGEEEEEEEEECCSS
T ss_pred             hhhhcccccch---------------HHH---hhhhhcccCCEEEEeccc
Confidence            99999875431               111   123333488888888543

>d1gq2a1 c.2.1.7 (A:280-580) Mitochondrial NAD(P)-dependent malic enzyme {Domestic pigeon (Columba livia) [TaxId: 8932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Mitochondrial NAD(P)-dependent malic enzyme
species: Domestic pigeon (Columba livia) [TaxId: 8932]

Probab=91.77  E-value=0.041  Score=49.75  Aligned_cols=127  Identities=15%  Similarity=0.218  Sum_probs=70.6

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHh----CCC-----CcEEEEEeCCCc-hhHHHHhhcccCCCeEEEEeCCCChhhhcCC-
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKI----NPL-----VSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLENALTG-   88 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~----~~~-----~~el~L~D~~~~-~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~-   88 (369)
                      ..||+|.|| |..|..++.++..    .++     .+.+.++|.+.+ ...-.|+.+... ..........++.+.++. 
T Consensus        25 d~kiV~~GA-GsAg~gia~~l~~~~~~~G~~~~~a~~~i~l~D~kGlv~~~R~~l~~~k~-~~a~~~~~~~~l~~~i~~v  102 (298)
T d1gq2a1          25 DHTVLFQGA-GEAALGIANLIVMAMQKEGVSKEEAIKRIWMVDSKGLIVKGRASLTPEKE-HFAHEHCEMKNLEDIVKDI  102 (298)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHHHHHHTCCHHHHHTTEEEEETTEECBTTCSSCCTTGG-GGCBSCCCCCCHHHHHHHH
T ss_pred             HcEEEEECc-cHHHHHHHHHHHHHHHHcCCChhhccceEEEEeCCCcccCCCcccCHHHH-HHHHHhhhhhhhHHHhhcc
Confidence            469999999 9999998876643    232     358999999761 111123322110 000000112345555543 


Q ss_pred             -CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe
Q 017551           89 -MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  165 (369)
Q Consensus        89 -ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~  165 (369)
                       .+++|-+.+.|   |-           +-+++.+.|.+.+++.+|+-.|||..-.-+...++++-.   +-+-+|+.
T Consensus       103 kptvliG~s~~~---g~-----------ft~evv~~ma~~~~~PIIFaLSNPt~~~E~~~~~a~~wt---~G~ai~As  163 (298)
T d1gq2a1         103 KPTVLIGVAAIG---GA-----------FTQQILQDMAAFNKRPIIFALSNPTSKAECTAEQLYKYT---EGRGIFAS  163 (298)
T ss_dssp             CCSEEEECSCCT---TC-----------SCHHHHHHHHHHCSSCEEEECCSSGGGCSSCHHHHHHHT---TTCCEEEE
T ss_pred             ChheeEeccccc---Cc-----------CCHHHHHHHHhhCCCCEEEEccCCCCcCCCCHHHHhhhc---ccceEEee
Confidence             56777665554   31           123556677788999999999999764322223333222   13456665

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=91.74  E-value=0.17  Score=41.42  Aligned_cols=69  Identities=23%  Similarity=0.222  Sum_probs=51.7

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG   97 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag   97 (369)
                      -..++++|+|= |.+|..+|..++..+.  .+..+++|+..+... ..+   .-++      ..++++++.+|+||.+-|
T Consensus        21 laGk~vvV~GY-G~vGrG~A~~~rg~Ga--~V~V~E~DPi~alqA-~md---Gf~v------~~~~~a~~~aDi~vTaTG   87 (163)
T d1v8ba1          21 ISGKIVVICGY-GDVGKGCASSMKGLGA--RVYITEIDPICAIQA-VME---GFNV------VTLDEIVDKGDFFITCTG   87 (163)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHHTC--EEEEECSCHHHHHHH-HTT---TCEE------CCHHHHTTTCSEEEECCS
T ss_pred             ecCCEEEEecc-cccchhHHHHHHhCCC--EEEEEecCchhhHHH-Hhc---CCcc------CchhHccccCcEEEEcCC
Confidence            44569999999 9999999999998887  999999998443322 122   1122      246799999999999865


Q ss_pred             CC
Q 017551           98 VP   99 (369)
Q Consensus        98 ~p   99 (369)
                      .+
T Consensus        88 n~   89 (163)
T d1v8ba1          88 NV   89 (163)
T ss_dssp             SS
T ss_pred             CC
Confidence            43

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=91.70  E-value=0.28  Score=39.89  Aligned_cols=98  Identities=16%  Similarity=0.269  Sum_probs=59.6

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHhhcccCCCeEEEEeCCCChhhhc-----CCCc
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENAL-----TGMD   90 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-~~g~~~dL~~~~~~~~v~~~~~t~dl~~al-----~~AD   90 (369)
                      .++..+|.|+|+ |.+|...+..++..+. ..++..|.++ ....+.++.-    ..+ +.....|+.+.+     .+.|
T Consensus        26 ~~~g~~VlI~G~-G~iG~~~~~~ak~~g~-~~v~~~~~~~~k~~~a~~~Ga----~~~-i~~~~~~~~~~i~~~t~gg~D   98 (174)
T d1f8fa2          26 VTPASSFVTWGA-GAVGLSALLAAKVCGA-SIIIAVDIVESRLELAKQLGA----THV-INSKTQDPVAAIKEITDGGVN   98 (174)
T ss_dssp             CCTTCEEEEESC-SHHHHHHHHHHHHHTC-SEEEEEESCHHHHHHHHHHTC----SEE-EETTTSCHHHHHHHHTTSCEE
T ss_pred             CCCCCEEEEeCC-CHHHhhhhhccccccc-ceeeeeccHHHHHHHHHHcCC----eEE-EeCCCcCHHHHHHHHcCCCCc
Confidence            445679999999 9999999988887764 3677889876 3334444431    122 112234444433     2489


Q ss_pred             EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC
Q 017551           91 LVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP  139 (369)
Q Consensus        91 iVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP  139 (369)
                      +||.+.|.+               ..+.+   .++-..|.+.+++++.|
T Consensus        99 ~vid~~G~~---------------~~~~~---~~~~~~~~G~i~~~G~~  129 (174)
T d1f8fa2          99 FALESTGSP---------------EILKQ---GVDALGILGKIAVVGAP  129 (174)
T ss_dssp             EEEECSCCH---------------HHHHH---HHHTEEEEEEEEECCCC
T ss_pred             EEEEcCCcH---------------HHHHH---HHhcccCceEEEEEeec
Confidence            999997543               11222   22233588888887644

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=91.57  E-value=0.23  Score=40.34  Aligned_cols=74  Identities=18%  Similarity=0.222  Sum_probs=46.9

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhc------CCCcE
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL------TGMDL   91 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al------~~ADi   91 (369)
                      ++..+|.|.||+|.+|+..+..++..+.  +++..+.++.+   .|+.... .....+.....|+.+.+      ++.|+
T Consensus        24 ~~g~~VlI~ga~g~vG~~~iqla~~~g~--~vi~~~~~~~~---~~~l~~~-Ga~~vi~~~~~~~~~~v~~~t~~~g~d~   97 (183)
T d1pqwa_          24 SPGERVLIHSATGGVGMAAVSIAKMIGA--RIYTTAGSDAK---REMLSRL-GVEYVGDSRSVDFADEILELTDGYGVDV   97 (183)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHHTC--EEEEEESSHHH---HHHHHTT-CCSEEEETTCSTHHHHHHHHTTTCCEEE
T ss_pred             CCCCEEEEECCCCCcccccchhhccccc--cceeeeccccc---ccccccc-cccccccCCccCHHHHHHHHhCCCCEEE
Confidence            4456999999999999999988888776  76666654322   1222211 22222222234555555      67999


Q ss_pred             EEEcCC
Q 017551           92 VIIPAG   97 (369)
Q Consensus        92 Vii~ag   97 (369)
                      |+-+.|
T Consensus        98 v~d~~g  103 (183)
T d1pqwa_          98 VLNSLA  103 (183)
T ss_dssp             EEECCC
T ss_pred             EEeccc
Confidence            999864

>d1o0sa1 c.2.1.7 (A:296-603) Mitochondrial NAD(P)-dependent malic enzyme {Pig roundworm (Ascaris suum) [TaxId: 6253]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Mitochondrial NAD(P)-dependent malic enzyme
species: Pig roundworm (Ascaris suum) [TaxId: 6253]

Probab=91.53  E-value=0.07  Score=48.31  Aligned_cols=105  Identities=13%  Similarity=0.179  Sum_probs=63.1

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHh----CCC-----CcEEEEEeCCCc--hhHHHHhhccc--CCCeEEEEeCCCChhhhc
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKI----NPL-----VSVLHLYDVVNT--PGVTADISHMD--TGAVVRGFLGQPQLENAL   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~----~~~-----~~el~L~D~~~~--~g~~~dL~~~~--~~~~v~~~~~t~dl~~al   86 (369)
                      ..||+|.|| |..|..++.+|..    .|+     .+.++++|.+.+  ... .|+....  +.....   ..+++.+++
T Consensus        25 d~kivi~GA-GaAg~gia~~l~~~~~~~G~~~~~a~~~i~~vD~~Glv~~~r-~d~~~~k~~~a~~~~---~~~~l~~~i   99 (308)
T d1o0sa1          25 QEKYLFFGA-GAASTGIAEMIVHQMQNEGISKEEACNRIYLMDIDGLVTKNR-KEMNPRHVQFAKDMP---ETTSILEVI   99 (308)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHHHHTTTCCHHHHHHTEEEEETTEECBTTC-SSCCGGGTTTCBSSC---CCCCHHHHH
T ss_pred             HcEEEEECc-CHHHHHHHHHHHHHHHhcCCchhhhhceEEEEeCCCCccCCC-cccCHHHHHHHHhcc---cCCcHHHHH
Confidence            469999999 9999998876643    343     246999998761  111 2332211  111111   123455555


Q ss_pred             CCC--cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCh
Q 017551           87 TGM--DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNST  143 (369)
Q Consensus        87 ~~A--DiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~  143 (369)
                      +.+  +++|-+.+.+   |-           +-+++.+.|.+.+++.+|+-.|||..-.
T Consensus       100 ~~~kptvliG~s~~~---g~-----------ft~evv~~Ma~~~~~PIIFaLSNPtp~~  144 (308)
T d1o0sa1         100 RAARPGALIGASTVR---GA-----------FNEEVIRAMAEINERPIIFALSNPTSKA  144 (308)
T ss_dssp             HHHCCSEEEECSSCT---TC-----------SCHHHHHHHHHHCSSCEEEECCSSGGGC
T ss_pred             hccccccEEeccccc---CC-----------CCHHHHHHHHhhCCCcEEEEccCCCCCC
Confidence            433  4666655444   31           1235567788899999999999998643

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.35  E-value=0.12  Score=40.02  Aligned_cols=35  Identities=20%  Similarity=0.084  Sum_probs=31.6

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      -+.||+|||| |.+|.-+|..+...+.  ++.+++..+
T Consensus        21 ~pk~vvIvGg-G~iG~E~A~~l~~~G~--~Vtlv~~~~   55 (125)
T d3grsa2          21 LPGRSVIVGA-GYIAVEMAGILSALGS--KTSLMIRHD   55 (125)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSS
T ss_pred             cCCEEEEEcC-CccHHHHHHHHhcCCc--EEEEEeecc
Confidence            3579999999 9999999999998887  999999875

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=91.30  E-value=0.15  Score=38.93  Aligned_cols=35  Identities=23%  Similarity=0.314  Sum_probs=31.1

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ...||.|+|+ |..|..++.....-|+  +++.+|.+.
T Consensus        10 ~~~kigIlGg-GQL~rMla~aA~~lG~--~v~v~d~~~   44 (111)
T d1kjqa2          10 AATRVMLLGS-GELGKEVAIECQRLGV--EVIAVDRYA   44 (111)
T ss_dssp             TCCEEEEESC-SHHHHHHHHHHHTTTC--EEEEEESST
T ss_pred             CCCEEEEEeC-CHHHHHHHHHHHHCCC--EEEEEcCCC
Confidence            3469999999 9999999999888888  999999876

>d2h1qa1 c.67.3.1 (A:1-251) Hypothetical protein Dhaf_3308 {Desulfitobacterium hafniense [TaxId: 49338]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: Dhaf3308-like
family: Dhaf3308-like
domain: Hypothetical protein Dhaf 3308
species: Desulfitobacterium hafniense [TaxId: 49338]

Probab=91.13  E-value=0.19  Score=43.97  Aligned_cols=114  Identities=24%  Similarity=0.229  Sum_probs=74.5

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP   99 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p   99 (369)
                      ..||+|||-     .++...+...+.  ++..+|.+...+   |+            . .++-++.+..||+||+|+   
T Consensus       122 g~kV~vIG~-----~P~v~~l~~~~~--~~~VlE~~p~~g---d~------------p-~~~~~~lLp~aD~viiTG---  175 (251)
T d2h1qa1         122 GKKVGVVGH-----FPHLESLLEPIC--DLSILEWSPEEG---DY------------P-LPASEFILPECDYVYITC---  175 (251)
T ss_dssp             TSEEEEESC-----CTTHHHHHTTTS--EEEEEESSCCTT---CE------------E-GGGHHHHGGGCSEEEEET---
T ss_pred             CCEEEEEec-----chhHHHHHhcCC--cEEEEeCCCCCC---CC------------C-chHHHHhhhcCCEEEEEe---
Confidence            469999987     466666666665  899999875221   11            1 123467899999999996   


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEechhcHHHHHHHHHH
Q 017551          100 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAE  179 (369)
Q Consensus       100 ~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t~Ld~~R~~~~la~  179 (369)
                                    ..++..-.+.+=+.|+++..+++.-|...+.|.+    .++   .-+.+=|+-..|..++.+.|++
T Consensus       176 --------------sTlvN~Tl~~LL~~~~~a~~vvl~GPS~p~~P~l----f~~---Gv~~lag~~v~d~~~~~~~i~~  234 (251)
T d2h1qa1         176 --------------ASVVDKTLPRLLELSRNARRITLVGPGTPLAPVL----FEH---GLQELSGFMVKDNARAFRIVAG  234 (251)
T ss_dssp             --------------HHHHHTCHHHHHHHTTTSSEEEEESTTCCCCGGG----GGT---TCSEEEEEEESCHHHHHHHHTT
T ss_pred             --------------chhhcCCHHHHHHhCCcCCEEEEECCCcccCHHH----Hhc---CCceEeEEEEeCHHHHHHHHHc
Confidence                          3344455556666787775555555777777632    233   2345556666888888887764


Q ss_pred             H
Q 017551          180 V  180 (369)
Q Consensus       180 ~  180 (369)
                      -
T Consensus       235 G  235 (251)
T d2h1qa1         235 A  235 (251)
T ss_dssp             S
T ss_pred             C
Confidence            4

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=91.10  E-value=1.2  Score=35.04  Aligned_cols=114  Identities=11%  Similarity=-0.021  Sum_probs=67.5

Q ss_pred             CCEEEEEcCC---CccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551           20 GFKVAILGAA---GGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA   96 (369)
Q Consensus        20 ~~KI~IiGA~---G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a   96 (369)
                      ++.|+|||||   +..|..++..|...++  +|+++..+..  .   +.      ....   ..++.+.-...|+|++..
T Consensus        19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g~--~v~pVnP~~~--~---i~------G~~~---~~sl~dlp~~iD~v~i~v   82 (139)
T d2d59a1          19 YKKIALVGASPKPERDANIVMKYLLEHGY--DVYPVNPKYE--E---VL------GRKC---YPSVLDIPDKIEVVDLFV   82 (139)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTC--EEEEECTTCS--E---ET------TEEC---BSSGGGCSSCCSEEEECS
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHHHCCC--EEEEECCccc--c---cC------CCcc---cccccccCccceEEEEEe
Confidence            4589999997   5688898989999988  8888886531  0   11      1111   234433334689988873


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-ch-hcHHHH
Q 017551           97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TM-LDVVRA  173 (369)
Q Consensus        97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~-Ld~~R~  173 (369)
                        |              .+.+.++.+++.+..++++.+   +|-..- .-+.+.+++. |   -+++|= |. .+..|+
T Consensus        83 --p--------------~~~~~~~~~e~~~~g~k~v~~---~~G~~~-ee~~~~a~~~-g---i~vig~~C~~v~~~rl  137 (139)
T d2d59a1          83 --K--------------PKLTMEYVEQAIKKGAKVVWF---QYNTYN-REASKKADEA-G---LIIVANRCMMREHERL  137 (139)
T ss_dssp             --C--------------HHHHHHHHHHHHHHTCSEEEE---CTTCCC-HHHHHHHHHT-T---CEEEESCCHHHHHHHH
T ss_pred             --C--------------HHHHHHHHHHHHHhCCCEEEE---eccccC-HHHHHHHHHC-C---CEEEcCCcChhhhhhh
Confidence              1              344556666666667666443   343332 2223444554 3   378886 74 454443

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.07  E-value=0.34  Score=38.33  Aligned_cols=35  Identities=14%  Similarity=0.170  Sum_probs=30.0

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV   55 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~   55 (369)
                      -+.++|.|||| |.+|..-+..|...|-  +|++++..
T Consensus        11 l~gkrvLViGg-G~va~~ka~~Ll~~GA--~VtVvap~   45 (150)
T d1kyqa1          11 LKDKRILLIGG-GEVGLTRLYKLMPTGC--KLTLVSPD   45 (150)
T ss_dssp             CTTCEEEEEEE-SHHHHHHHHHHGGGTC--EEEEEEEE
T ss_pred             eCCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCC
Confidence            34579999999 9999999999998887  89999653

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.07  E-value=0.1  Score=41.02  Aligned_cols=25  Identities=24%  Similarity=0.424  Sum_probs=22.0

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPL   45 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~   45 (369)
                      |||+|.|++|.+|+.++..+...+.
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~   25 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGH   25 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCC
Confidence            7999999999999999887777665

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=90.97  E-value=0.12  Score=39.74  Aligned_cols=34  Identities=24%  Similarity=0.156  Sum_probs=30.8

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ..+|+|||| |.+|.-+|..|...+.  ++.|++..+
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~--~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGY--HVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTC--EEEEECSSS
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccc--eEEEEeccc
Confidence            359999999 9999999999998887  999999876

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.96  E-value=0.061  Score=46.98  Aligned_cols=32  Identities=28%  Similarity=0.348  Sum_probs=30.0

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ||+|||| |-.|.++|..|.+.|+  ++.++|...
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~--~v~vlE~~~   35 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGI--DNVILERQT   35 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTC--CEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCC--CEEEEeCCC
Confidence            7999999 9999999999999998  999999865

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=90.71  E-value=0.094  Score=46.05  Aligned_cols=33  Identities=24%  Similarity=0.342  Sum_probs=29.1

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      +|+|||| |-+|.+.|+.|+..+. .+|+|+|.+.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~-~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGW-NNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTC-CCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCC-CcEEEEeCCC
Confidence            8999999 9999999999998874 2699999864

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=90.69  E-value=0.11  Score=44.17  Aligned_cols=34  Identities=21%  Similarity=0.358  Sum_probs=31.1

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      +.+.|+||+++||..++..|+..|.  +|++.|+++
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga--~V~i~~~~~   35 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGY--RVVVLDLRR   35 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTC--EEEEEESSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCc
Confidence            4678899999999999999999998  999999876

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=90.69  E-value=0.2  Score=38.41  Aligned_cols=37  Identities=19%  Similarity=0.249  Sum_probs=32.2

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ...+.||+|||| |.+|.-+|..+...|.  ++.++...+
T Consensus        19 ~~~p~~i~IiG~-G~ig~E~A~~l~~~G~--~Vtiv~~~~   55 (119)
T d3lada2          19 QNVPGKLGVIGA-GVIGLELGSVWARLGA--EVTVLEAMD   55 (119)
T ss_dssp             SSCCSEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESSS
T ss_pred             ccCCCeEEEECC-ChHHHHHHHHHHHcCC--ceEEEEeec
Confidence            345689999999 9999999999998887  899998765

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=90.66  E-value=1  Score=38.77  Aligned_cols=32  Identities=19%  Similarity=0.195  Sum_probs=27.8

Q ss_pred             EEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           23 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        23 I~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ..|+||++++|..++..|+..|.  +|++.|.+.
T Consensus         5 AlITGas~GIG~aiA~~la~~Ga--~V~i~~~~~   36 (284)
T d1e7wa_           5 ALVTGAAKRLGRSIAEGLHAEGY--AVCLHYHRS   36 (284)
T ss_dssp             EEETTCSSHHHHHHHHHHHHTTC--EEEEEESSC
T ss_pred             EEEeCCCCHHHHHHHHHHHHcCC--EEEEEeCCC
Confidence            34669999999999999999998  999988765

>d1vlva2 c.78.1.1 (A:153-313) Ornithine transcarbamoylase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.62  E-value=0.36  Score=38.85  Aligned_cols=73  Identities=21%  Similarity=0.267  Sum_probs=47.7

Q ss_pred             CCCEEEEEc-CCCccHHHHHHHHHhCCCCcEEEEEeCCC--c-hhHHHHhhcc--cCCCeEEEEeCCCChhhhcCCCcEE
Q 017551           19 AGFKVAILG-AAGGIGQPLAMLMKINPLVSVLHLYDVVN--T-PGVTADISHM--DTGAVVRGFLGQPQLENALTGMDLV   92 (369)
Q Consensus        19 ~~~KI~IiG-A~G~vGs~la~~l~~~~~~~el~L~D~~~--~-~g~~~dL~~~--~~~~~v~~~~~t~dl~~al~~ADiV   92 (369)
                      +..||+++| +...|-.+++..+..-|.  ++++.-...  . ..........  .....+..   ++|+++|+++||+|
T Consensus         2 ~g~ki~~vGD~~nnV~~Sli~~~~~~g~--~i~~~~P~~~~~~~~~~~~~~~~~~~~~~~i~~---~~d~~~ai~~aDvi   76 (161)
T d1vlva2           2 KGVKVVFMGDTRNNVATSLMIACAKMGM--NFVACGPEELKPRSDVFKRCQEIVKETDGSVSF---TSNLEEALAGADVV   76 (161)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHTTC--EEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEE---ESCHHHHHTTCSEE
T ss_pred             CCCEEEEEcCCccHHHHHHHHHHHHcCC--EEEEecchhhhhhhhHHHHHHHHHhhcCCceEE---EecHHHhhhhhhhe
Confidence            356999999 424677777777777776  888887754  1 2221111111  11345555   36789999999999


Q ss_pred             EEcC
Q 017551           93 IIPA   96 (369)
Q Consensus        93 ii~a   96 (369)
                      ....
T Consensus        77 yt~~   80 (161)
T d1vlva2          77 YTDV   80 (161)
T ss_dssp             EECC
T ss_pred             eccc
Confidence            9863

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.47  E-value=0.28  Score=39.58  Aligned_cols=101  Identities=17%  Similarity=0.121  Sum_probs=61.4

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHhhcccCCCeEEEEeCCCChh-hhcCCCcEEEE
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLE-NALTGMDLVII   94 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-~~g~~~dL~~~~~~~~v~~~~~t~dl~-~al~~ADiVii   94 (369)
                      .++..+|.|+|+ |.+|...+..++..+.  +++.+|.++ ....+.+|.-    ..+-.+....+.. ....+.|+|+.
T Consensus        25 ~~~g~~vlI~Ga-G~vG~~a~q~ak~~G~--~vi~~~~~~~k~~~a~~lGa----~~~i~~~~~~~~~~~~~~~~d~vi~   97 (168)
T d1piwa2          25 CGPGKKVGIVGL-GGIGSMGTLISKAMGA--ETYVISRSSRKREDAMKMGA----DHYIATLEEGDWGEKYFDTFDLIVV   97 (168)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHHTC--EEEEEESSSTTHHHHHHHTC----SEEEEGGGTSCHHHHSCSCEEEEEE
T ss_pred             cCCCCEEEEECC-CCcchhHHHHhhhccc--cccccccchhHHHHhhccCC----cEEeeccchHHHHHhhhcccceEEE
Confidence            455679999998 9999998888887786  888999987 3334444431    1111111112222 33467899999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 017551           95 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  140 (369)
Q Consensus        95 ~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv  140 (369)
                      +.+.+.....+                ..++-..|.+.+++++-|-
T Consensus        98 ~~~~~~~~~~~----------------~~~~~l~~~G~iv~~G~~~  127 (168)
T d1piwa2          98 CASSLTDIDFN----------------IMPKAMKVGGRIVSISIPE  127 (168)
T ss_dssp             CCSCSTTCCTT----------------TGGGGEEEEEEEEECCCCC
T ss_pred             EecCCccchHH----------------HHHHHhhccceEEEecccc
Confidence            86644321110                1233345888888886443

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=90.45  E-value=0.18  Score=38.26  Aligned_cols=36  Identities=8%  Similarity=0.098  Sum_probs=31.5

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      .+..+|+|||+ |.+|.-+|..|...+.  ++.+++..+
T Consensus        20 ~~~~~vvVvGg-G~ig~E~A~~l~~~g~--~vt~i~~~~   55 (121)
T d1mo9a2          20 EPGSTVVVVGG-SKTAVEYGCFFNATGR--RTVMLVRTE   55 (121)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcch--hheEeeccc
Confidence            44579999999 9999999999998876  999999865

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.44  E-value=0.11  Score=42.60  Aligned_cols=35  Identities=20%  Similarity=0.271  Sum_probs=31.5

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ...-|+|||| |..|.+.|..|+..|.  +|.++|.+.
T Consensus         4 ~~yDviViGa-G~~Gl~~A~~La~~G~--~V~vlE~~~   38 (297)
T d2bcgg1           4 TDYDVIVLGT-GITECILSGLLSVDGK--KVLHIDKQD   38 (297)
T ss_dssp             CBCSEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSS
T ss_pred             CcCCEEEECc-CHHHHHHHHHHHHCCC--CEEEEcCCC
Confidence            3456999999 9999999999999998  999999976

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.38  E-value=0.1  Score=49.38  Aligned_cols=34  Identities=29%  Similarity=0.552  Sum_probs=30.8

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      .||.|||+ |++|+.++..|+..|. .+|.|+|-+.
T Consensus        38 ~kVlvvG~-GglG~ei~k~L~~~Gv-g~i~lvD~D~   71 (426)
T d1yovb1          38 CKVLVIGA-GGLGCELLKNLALSGF-RQIHVIDMDT   71 (426)
T ss_dssp             CCEEEECS-STTHHHHHHHHHTTTC-CCEEEECCCB
T ss_pred             CeEEEECC-CHHHHHHHHHHHHcCC-CeEEEEECCC
Confidence            49999999 9999999999999884 5899999875

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=90.08  E-value=0.68  Score=39.58  Aligned_cols=77  Identities=18%  Similarity=0.171  Sum_probs=48.3

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCChh----------hhc--
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQLE----------NAL--   86 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~dl~----------~al--   86 (369)
                      ++.|.|+||++++|..++..|+..|..-.|++.+.+....  .++.... ..++..+. .-+|.+          +.+  
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~--~~l~~~~-~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   79 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKA--TELKSIK-DSRVHVLPLTVTCDKSLDTFVSKVGEIVGS   79 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGC--HHHHTCC-CTTEEEEECCTTCHHHHHHHHHHHHHHHGG
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHH--HHHHHhh-CCceEEEEEecCCHHHHHHHHHHHHHHhCC
Confidence            4588999999999999999999988544788888775222  1233221 22333332 112221          111  


Q ss_pred             CCCcEEEEcCCCC
Q 017551           87 TGMDLVIIPAGVP   99 (369)
Q Consensus        87 ~~ADiVii~ag~p   99 (369)
                      .+-|++|..||+.
T Consensus        80 ~~idilinnAG~~   92 (250)
T d1yo6a1          80 DGLSLLINNAGVL   92 (250)
T ss_dssp             GCCCEEEECCCCC
T ss_pred             CCeEEEEEcCccc
Confidence            2489999999964

>d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=89.68  E-value=0.52  Score=38.03  Aligned_cols=72  Identities=11%  Similarity=0.069  Sum_probs=48.5

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHH----hhcccCCCeEEEEeCCCChhhhcCCCcEE
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTAD----ISHMDTGAVVRGFLGQPQLENALTGMDLV   92 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~d----L~~~~~~~~v~~~~~t~dl~~al~~ADiV   92 (369)
                      +..||+++|-...|..+++..+..-|.  ++.++-...  ......+    ..+.. ...+..   +.|+.+|+++||+|
T Consensus         3 ~gl~Ia~VGD~~nv~~Sli~~l~~~g~--~v~~~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~d~~ea~~~advi   76 (163)
T d1pvva2           3 KGVKVVYVGDGNNVAHSLMIAGTKLGA--DVVVATPEGYEPDEKVIKWAEQNAAES-GGSFEL---LHDPVKAVKDADVI   76 (163)
T ss_dssp             TTCEEEEESCCCHHHHHHHHHHHHTTC--EEEEECCTTCCCCHHHHHHHHHHHHHH-TCEEEE---ESCHHHHTTTCSEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCC--eEEEecccccCCChHHHHHHHHhhhcc-cceEEE---ecCHHHHhhhccEE
Confidence            457999999966677777777777776  899998765  2211111    11111 345554   35788999999999


Q ss_pred             EEcC
Q 017551           93 IIPA   96 (369)
Q Consensus        93 ii~a   96 (369)
                      ..+-
T Consensus        77 y~~~   80 (163)
T d1pvva2          77 YTDV   80 (163)
T ss_dssp             EECC
T ss_pred             eecc
Confidence            9863

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=89.64  E-value=0.12  Score=37.09  Aligned_cols=33  Identities=18%  Similarity=0.209  Sum_probs=29.3

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ++|.|+|+ |..|+-++.....-|+  +++.+|.+.
T Consensus         2 k~vgIlG~-GQLgrMl~~Aa~~LG~--~v~vldp~~   34 (78)
T d3etja2           2 KQVCVLGN-GQLGRMLRQAGEPLGI--AVWPVGLDA   34 (78)
T ss_dssp             EEEEEEBC-SHHHHHHHHHHGGGTE--EEEEECTTS
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCC--EEEEEcCCC
Confidence            48999999 9999999888887777  999999876

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=89.42  E-value=0.13  Score=44.40  Aligned_cols=33  Identities=24%  Similarity=0.437  Sum_probs=29.7

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      .-|+|||| |-+|.+.|+.|++++.  +++|+|...
T Consensus         4 yDvvIIGa-Gi~Gls~A~~La~~G~--~V~viE~~~   36 (281)
T d2gf3a1           4 FDVIVVGA-GSMGMAAGYQLAKQGV--KTLLVDAFD   36 (281)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSC
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCC--cEEEEeCCC
Confidence            36899999 9999999999999998  999999754

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=89.09  E-value=0.29  Score=40.47  Aligned_cols=74  Identities=16%  Similarity=0.172  Sum_probs=45.7

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch-hHHHHhhc----ccC-------CCeEEEEeCCCChhhhcCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISH----MDT-------GAVVRGFLGQPQLENALTG   88 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~-g~~~dL~~----~~~-------~~~v~~~~~t~dl~~al~~   88 (369)
                      .||+|.|- |.||..++..+..++-+.-+.+.|..... ....-..+    ...       ...+..   ..++.+.+.+
T Consensus         2 IKVaINGf-GRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v---~g~~~~~~~~   77 (178)
T d1b7go1           2 VNVAVNGY-GTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPV---AGTVEDLIKT   77 (178)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCC---CCCHHHHHHH
T ss_pred             eEEEEECC-CHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceec---CCchhhhhhc
Confidence            49999998 99999999999988765555556665421 11110011    000       011111   3456777889


Q ss_pred             CcEEEEcCCC
Q 017551           89 MDLVIIPAGV   98 (369)
Q Consensus        89 ADiVii~ag~   98 (369)
                      +|+||.+-|.
T Consensus        78 vDiViecTG~   87 (178)
T d1b7go1          78 SDIVVDTTPN   87 (178)
T ss_dssp             CSEEEECCST
T ss_pred             CCEEEECCCC
Confidence            9999998653

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=89.03  E-value=0.56  Score=40.05  Aligned_cols=73  Identities=12%  Similarity=0.209  Sum_probs=40.3

Q ss_pred             CCCCCEEEEEcCCCc----cHHHHHHHHHhCCCCcEEE-EEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhc--CCC
Q 017551           17 GAAGFKVAILGAAGG----IGQPLAMLMKINPLVSVLH-LYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL--TGM   89 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~----vGs~la~~l~~~~~~~el~-L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al--~~A   89 (369)
                      .++++||+|||+ |.    ++......+.....-.+|+ ++|.+......  +...........+   +++++.+  .+-
T Consensus        13 ~~k~irvgiIG~-G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~~~~~--~~~~~~~~~~~~~---~~~~~l~~~~~i   86 (237)
T d2nvwa1          13 SSRPIRVGFVGL-TSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQ--TIEQLQLKHATGF---DSLESFAQYKDI   86 (237)
T ss_dssp             GGCCEEEEEECC-CSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHH--HHHHTTCTTCEEE---SCHHHHHHCTTC
T ss_pred             CCCCeEEEEEec-CccccHHHHHHHHHHHhcCCCeEEEEEEcCCHHHHHH--HHHhcccccceee---cchhhccccccc
Confidence            567799999999 76    4444455565543222555 89987622211  1111111233433   3566666  467


Q ss_pred             cEEEEc
Q 017551           90 DLVIIP   95 (369)
Q Consensus        90 DiVii~   95 (369)
                      |+|+++
T Consensus        87 D~V~i~   92 (237)
T d2nvwa1          87 DMIVVS   92 (237)
T ss_dssp             SEEEEC
T ss_pred             ceeecc
Confidence            788887

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=88.61  E-value=1.3  Score=35.91  Aligned_cols=101  Identities=15%  Similarity=0.176  Sum_probs=60.3

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHhhcccCCCeEEEEeCCCChh---h--hcCCCc
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLE---N--ALTGMD   90 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-~~g~~~dL~~~~~~~~v~~~~~t~dl~---~--al~~AD   90 (369)
                      .++.-.|+|+|+ |.+|...+..++..+. .+|+.+|.++ ....+.++.-..   .+.........+   +  .=.++|
T Consensus        27 ~~~g~tVlI~G~-GgvGl~ai~~ak~~G~-~~Vi~vd~~~~kl~~Ak~~GA~~---~in~~~~~~~~~~~~~~~~g~G~d  101 (176)
T d1d1ta2          27 VKPGSTCVVFGL-GGVGLSVIMGCKSAGA-SRIIGIDLNKDKFEKAMAVGATE---CISPKDSTKPISEVLSEMTGNNVG  101 (176)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTC-SEEEEECSCGGGHHHHHHHTCSE---EECGGGCSSCHHHHHHHHHTSCCC
T ss_pred             CCCCCEEEEECC-CchhHHHHHHHHHcCC-ceEEEecCcHHHHHHHHhcCCcE---EECccccchHHHHHHHHhccccce
Confidence            344568999999 9999999998888773 4899999987 333444443211   111001011111   1  226899


Q ss_pred             EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCC
Q 017551           91 LVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPV  140 (369)
Q Consensus        91 iVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv  140 (369)
                      +||...|.+.                  .+...+....+ .+.++++..|.
T Consensus       102 ~vi~~~g~~~------------------~~~~a~~~~~~~~G~~v~vG~~~  134 (176)
T d1d1ta2         102 YTFEVIGHLE------------------TMIDALASCHMNYGTSVVVGVPP  134 (176)
T ss_dssp             EEEECSCCHH------------------HHHHHHTTSCTTTCEEEECSCCC
T ss_pred             EEEEeCCchH------------------HHHHHHHHhhcCCeEEEEEEccc
Confidence            9999875441                  11223333333 48888887764

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=88.55  E-value=0.14  Score=45.59  Aligned_cols=39  Identities=21%  Similarity=0.186  Sum_probs=33.0

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-chhHHH
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTA   62 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-~~g~~~   62 (369)
                      .+|+|||| |..|.++|..|++.+.  +|.++|.+. .-|.+.
T Consensus         2 ~dv~IIGa-G~sGl~~A~~L~~~g~--~V~iiEk~~~iGG~~~   41 (298)
T d1i8ta1           2 YDYIIVGS-GLFGAVCANELKKLNK--KVLVIEKRNHIGGNAY   41 (298)
T ss_dssp             EEEEEECC-SHHHHHHHHHHGGGTC--CEEEECSSSSSSGGGC
T ss_pred             ccEEEECC-cHHHHHHHHHHHhCCC--cEEEEECCCCcccceE
Confidence            48999999 9999999999998887  999999877 445543

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=87.84  E-value=0.31  Score=37.67  Aligned_cols=37  Identities=19%  Similarity=0.261  Sum_probs=32.3

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      .+.+.+++|||| |.+|.-+|..+...|.  ++.+++..+
T Consensus        23 ~~~p~~vvIiGg-G~IG~E~A~~~~~~G~--~Vtive~~~   59 (125)
T d1ojta2          23 KEVPGKLLIIGG-GIIGLEMGTVYSTLGS--RLDVVEMMD   59 (125)
T ss_dssp             CCCCSEEEEESC-SHHHHHHHHHHHHHTC--EEEEECSSS
T ss_pred             cccCCeEEEECC-CHHHHHHHHHhhcCCC--EEEEEEeec
Confidence            445789999999 9999999999988887  999998765

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=87.77  E-value=0.11  Score=40.66  Aligned_cols=36  Identities=22%  Similarity=0.367  Sum_probs=28.5

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      +.+|+|+|| |..|..++..+....-..-+.++|.+.
T Consensus         3 ~~~v~I~Ga-G~~G~~l~~~l~~~~~~~iv~fiDdd~   38 (126)
T d2dt5a2           3 KWGLCIVGM-GRLGSALADYPGFGESFELRGFFDVDP   38 (126)
T ss_dssp             CEEEEEECC-SHHHHHHHHCSCCCSSEEEEEEEESCT
T ss_pred             CceEEEEcC-CHHHHHHHHhHhhcCCcEEEEEEeCch
Confidence            459999999 999999987665554445688999876

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=87.66  E-value=0.21  Score=41.10  Aligned_cols=77  Identities=16%  Similarity=0.226  Sum_probs=46.6

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhH--HHH----hhcccCCCeEE-----EEeCCCChhhhcCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV--TAD----ISHMDTGAVVR-----GFLGQPQLENALTGM   89 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~--~~d----L~~~~~~~~v~-----~~~~t~dl~~al~~A   89 (369)
                      +||+|.|- |.||..++..+..++-+.-+.+.|+......  ...    +.+... ..+.     .+....++.+.+.++
T Consensus         3 irIaINGf-GRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v   80 (172)
T d2czca2           3 VKVGVNGY-GTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASE-EFIPRFEKEGFEVAGTLNDLLEKV   80 (172)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSG-GGHHHHHHHTCCCSCBHHHHHTTC
T ss_pred             EEEEEECC-CHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccc-cceeeecccCccccchhhhhhccC
Confidence            59999999 9999999988888776555667776542111  111    111000 0000     011124566778999


Q ss_pred             cEEEEcCCCC
Q 017551           90 DLVIIPAGVP   99 (369)
Q Consensus        90 DiVii~ag~p   99 (369)
                      |+|+.+.|..
T Consensus        81 DvViEcTG~f   90 (172)
T d2czca2          81 DIIVDATPGG   90 (172)
T ss_dssp             SEEEECCSTT
T ss_pred             CEEEECCCCC
Confidence            9999986543

>d1dxha2 c.78.1.1 (A:151-335) Ornithine transcarbamoylase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.56  E-value=1  Score=36.93  Aligned_cols=71  Identities=17%  Similarity=0.219  Sum_probs=47.8

Q ss_pred             CCEEEEEcC-CCccHHHHHHHHHhCCCCcEEEEEeCCC---chhHHH---HhhcccCCCeEEEEeCCCChhhhcCCCcEE
Q 017551           20 GFKVAILGA-AGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTA---DISHMDTGAVVRGFLGQPQLENALTGMDLV   92 (369)
Q Consensus        20 ~~KI~IiGA-~G~vGs~la~~l~~~~~~~el~L~D~~~---~~g~~~---dL~~~~~~~~v~~~~~t~dl~~al~~ADiV   92 (369)
                      ..||+++|= ..+|..+++..+..-|.  +|.++-...   ......   ++... ....+..   ++|+++|++++|+|
T Consensus         5 ~lkia~vGD~~nnV~~Sli~~~~~~G~--~l~l~~P~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~d~~eai~~aDvV   78 (185)
T d1dxha2           5 DISYAYLGDARNNMGNSLLLIGAKLGM--DVRIAAPKALWPHDEFVAQCKKFAEE-SGAKLTL---TEDPKEAVKGVDFV   78 (185)
T ss_dssp             GCEEEEESCCSSHHHHHHHHHHHHTTC--EEEEECCGGGSCCHHHHHHHHHHHHH-HTCEEEE---ESCHHHHTTTCSEE
T ss_pred             CCEEEEEcCCcchHHHHHHHHHHHcCC--EEEEEccHHHHhhhHHHHHHHHHhhc-cCCeEEE---EeChhhccccccEE
Confidence            469999994 23677888888887776  999998755   122222   22221 1345554   35789999999998


Q ss_pred             EEcC
Q 017551           93 IIPA   96 (369)
Q Consensus        93 ii~a   96 (369)
                      ....
T Consensus        79 yt~~   82 (185)
T d1dxha2          79 HTDV   82 (185)
T ss_dssp             EECC
T ss_pred             Eeeh
Confidence            8863

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=87.48  E-value=0.65  Score=37.31  Aligned_cols=35  Identities=23%  Similarity=0.242  Sum_probs=26.1

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV   55 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~   55 (369)
                      +||+|+|++|+||.+..-.+.+++---+|+.+=-+
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~   36 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAG   36 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEES
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEec
Confidence            47999999999999988888887632255554443

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.32  E-value=0.71  Score=37.11  Aligned_cols=98  Identities=15%  Similarity=0.124  Sum_probs=58.2

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcccCCCeEEEEeCCCChhhhc------CCC
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLENAL------TGM   89 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~~~~v~~~~~t~dl~~al------~~A   89 (369)
                      .++..+|.|+||+|.+|+.....++..+.  +++..+.++. ...+.++.   . ..+-. ....|+.+.+      ++.
T Consensus        26 ~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~--~vi~~~~~~~~~~~~~~~G---a-~~vi~-~~~~~~~~~i~~~t~~~g~   98 (174)
T d1yb5a2          26 VKAGESVLVHGASGGVGLAACQIARAYGL--KILGTAGTEEGQKIVLQNG---A-HEVFN-HREVNYIDKIKKYVGEKGI   98 (174)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHTT---C-SEEEE-TTSTTHHHHHHHHHCTTCE
T ss_pred             CCCCCEEEEEeccccccccccccccccCc--ccccccccccccccccccC---c-ccccc-cccccHHHHhhhhhccCCc
Confidence            34567999999889999999888888886  7777776542 22222221   1 12221 2234554443      458


Q ss_pred             cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 017551           90 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  140 (369)
Q Consensus        90 DiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv  140 (369)
                      |+|+.+.|             .   +.+.+..+.   ..|.+.++.+.++.
T Consensus        99 d~v~d~~g-------------~---~~~~~~~~~---l~~~G~iv~~G~~~  130 (174)
T d1yb5a2          99 DIIIEMLA-------------N---VNLSKDLSL---LSHGGRVIVVGSRG  130 (174)
T ss_dssp             EEEEESCH-------------H---HHHHHHHHH---EEEEEEEEECCCCS
T ss_pred             eEEeeccc-------------H---HHHHHHHhc---cCCCCEEEEEecCC
Confidence            99888752             1   112232233   34788888886554

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=87.14  E-value=0.24  Score=41.86  Aligned_cols=32  Identities=25%  Similarity=0.217  Sum_probs=29.8

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      -|+|||| |-.|...|..|++.+.  ++.|+|.+.
T Consensus         4 DViIIGa-G~aGl~aA~~la~~G~--~V~liEk~~   35 (251)
T d2i0za1           4 DVIVIGG-GPSGLMAAIGAAEEGA--NVLLLDKGN   35 (251)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCC--cEEEEeCCC
Confidence            5899999 9999999999999998  999999876

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=86.69  E-value=0.77  Score=36.89  Aligned_cols=39  Identities=23%  Similarity=0.305  Sum_probs=31.3

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT   57 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~   57 (369)
                      -++...|.|+|| |.+|...+..++..+. ..|+..|.++.
T Consensus        26 vk~GdtVlV~Ga-GG~G~~~~~~~~~~g~-~~Vi~~~~~~~   64 (176)
T d2jhfa2          26 VTQGSTCAVFGL-GGVGLSVIMGCKAAGA-ARIIGVDINKD   64 (176)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTC-SEEEEECSCGG
T ss_pred             CCCCCEEEEECC-CCcHHHHHHHHHHcCC-ceEEeecCcHH
Confidence            344578999999 8899999888887762 38999999873

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=86.64  E-value=0.86  Score=36.55  Aligned_cols=73  Identities=16%  Similarity=0.031  Sum_probs=48.4

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch-hHHHHhhcccCCCeEEEEeCCCChhhhc------CCCc
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGFLGQPQLENAL------TGMD   90 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~-g~~~dL~~~~~~~~v~~~~~t~dl~~al------~~AD   90 (369)
                      ++..+|.|+||+|.+|+.....++..+.  +++..|.++.+ ..+.++.   . ..+- .....|+.+.+      ++.|
T Consensus        27 ~~g~~Vlv~ga~g~vG~~~iqlak~~Ga--~Vi~~~~s~~k~~~~~~lG---a-~~vi-~~~~~d~~~~v~~~t~g~g~d   99 (179)
T d1qora2          27 KPDEQFLFHAAAGGVGLIACQWAKALGA--KLIGTVGTAQKAQSALKAG---A-WQVI-NYREEDLVERLKEITGGKKVR   99 (179)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHHHT---C-SEEE-ETTTSCHHHHHHHHTTTCCEE
T ss_pred             CCCCEEEEEccccccchHHHHHHHHhCC--eEeecccchHHHHHHHhcC---C-eEEE-ECCCCCHHHHHHHHhCCCCeE
Confidence            4456999999988899999998888887  89999987632 2333332   1 1222 12245555544      4679


Q ss_pred             EEEEcCC
Q 017551           91 LVIIPAG   97 (369)
Q Consensus        91 iVii~ag   97 (369)
                      +|+-+.|
T Consensus       100 ~v~d~~g  106 (179)
T d1qora2         100 VVYDSVG  106 (179)
T ss_dssp             EEEECSC
T ss_pred             EEEeCcc
Confidence            8888864

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=86.60  E-value=0.27  Score=39.84  Aligned_cols=37  Identities=24%  Similarity=0.445  Sum_probs=25.7

Q ss_pred             CCCCEEEEEcCCCccHHHHH-HHHHhCCCCcEEE-EEeCCC
Q 017551           18 AAGFKVAILGAAGGIGQPLA-MLMKINPLVSVLH-LYDVVN   56 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la-~~l~~~~~~~el~-L~D~~~   56 (369)
                      ++++||+|||+ |.+|..+. ..+...+.+ ||+ +.|++.
T Consensus         2 ~kkirvaIIGa-G~ig~~~~~~~l~~~~~~-el~avas~~~   40 (157)
T d1nvmb1           2 NQKLKVAIIGS-GNIGTDLMIKVLRNAKYL-EMGAMVGIDA   40 (157)
T ss_dssp             CSCEEEEEECC-SHHHHHHHHHHHHHCSSE-EEEEEECSCT
T ss_pred             CCCcEEEEEcC-cHHHHHHHHHHHhhCCcc-eEEEEEecch
Confidence            45689999997 99998754 455555654 554 457765

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.44  E-value=0.27  Score=42.81  Aligned_cols=31  Identities=23%  Similarity=0.333  Sum_probs=28.8

Q ss_pred             EEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           23 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        23 I~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      |+|||| |..|.+.|..|++.|+  +|.++|...
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~--~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGL--NVVVLEARD   32 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTC--CEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCC--CEEEEecCC
Confidence            789999 9999999999999998  999999765

>d1pg5a2 c.78.1.1 (A:147-299) Aspartate carbamoyltransferase catalytic subunit {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Aspartate carbamoyltransferase catalytic subunit
species: Archaeon Sulfolobus acidocaldarius [TaxId: 2285]

Probab=86.31  E-value=0.88  Score=36.17  Aligned_cols=69  Identities=13%  Similarity=0.076  Sum_probs=42.5

Q ss_pred             CCEEEEEcCCCc--cHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551           20 GFKVAILGAAGG--IGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP   95 (369)
Q Consensus        20 ~~KI~IiGA~G~--vGs~la~~l~~~~~~~el~L~D~~~-~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~   95 (369)
                      ..||++||=.-+  +..+++..+..-|.  +++++=..+ ..-. .++... ....+..+   +|+++++++||+|..+
T Consensus         3 gl~i~~vGD~~~sRv~~Sl~~~l~~~g~--~~~~~~p~~~~~~~-~~~~~~-~~~~~~~~---~d~~eai~~aDvvy~~   74 (153)
T d1pg5a2           3 GLVFALLGDLKYARTVNSLLRILTRFRP--KLVYLISPQLLRAR-KEILDE-LNYPVKEV---ENPFEVINEVDVLYVT   74 (153)
T ss_dssp             TCEEEEEECCSSCHHHHHHHHHGGGSCC--SEEEEECCGGGCCC-HHHHTT-CCSCEEEE---SCGGGTGGGCSEEEEE
T ss_pred             CCEEEEECCCCccHHHHHHHHHHHHcCC--eeEEEecccccccc-hhhccc-CCCeEEEE---eCHHHHhhcCCeEEEe
Confidence            469999998333  77777777777775  555544433 1100 111111 23455553   5778999999998876

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=86.14  E-value=0.42  Score=37.70  Aligned_cols=34  Identities=21%  Similarity=0.332  Sum_probs=25.3

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCC
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV   55 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~   55 (369)
                      ||+|+||+|.||+.++..+...+-..=+.-+|..
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~   34 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAG   34 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTT
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence            8999999999999999888776543333445543

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=86.05  E-value=0.27  Score=37.82  Aligned_cols=36  Identities=17%  Similarity=0.207  Sum_probs=31.8

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ..+.+++|||| |.+|.-+|..+...|.  ++.++...+
T Consensus        23 ~~p~~~viiG~-G~iglE~A~~~~~~G~--~Vtvi~~~~   58 (123)
T d1dxla2          23 EIPKKLVVIGA-GYIGLEMGSVWGRIGS--EVTVVEFAS   58 (123)
T ss_dssp             SCCSEEEESCC-SHHHHHHHHHHHHHTC--EEEEECSSS
T ss_pred             ccCCeEEEEcc-chHHHHHHHHHHhcCC--eEEEEEEcc
Confidence            44679999999 9999999999998886  999998865

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=85.92  E-value=2.4  Score=33.64  Aligned_cols=118  Identities=15%  Similarity=0.154  Sum_probs=64.8

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch-hHHHHhhcccCCCeEEEEeCCCChhhhc-----CCCcE
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGFLGQPQLENAL-----TGMDL   91 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~-g~~~dL~~~~~~~~v~~~~~t~dl~~al-----~~ADi   91 (369)
                      ++...|.|+|+ |.+|...+..++..+. ..++..|.++.+ ..+.++.     .........++.++..     .+.|+
T Consensus        31 ~~g~~vli~Ga-G~vG~~~~~~a~~~g~-~~vv~~~~~~~k~~~~~~~g-----a~~~i~~~~~~~~~~~~~~~~~g~d~  103 (172)
T d1h2ba2          31 YPGAYVAIVGV-GGLGHIAVQLLKVMTP-ATVIALDVKEEKLKLAERLG-----ADHVVDARRDPVKQVMELTRGRGVNV  103 (172)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCC-CEEEEEESSHHHHHHHHHTT-----CSEEEETTSCHHHHHHHHTTTCCEEE
T ss_pred             CCCCEEEEeCC-ChHHHHHHHHHHhhcC-cccccccchhHHHHHHhhcc-----cceeecCcccHHHHHHHhhCCCCceE
Confidence            34568999998 9999998888876653 378888987622 2222221     1111111112222111     46899


Q ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEec
Q 017551           92 VIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT  166 (369)
Q Consensus        92 Vii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t  166 (369)
                      ||.+.|.+               ..   +-..+.-..|.+.++++..+.++-.+.. .++.+     ..++.|+.
T Consensus       104 vid~~g~~---------------~~---~~~a~~~l~~~G~iv~~G~~~~~~~~~~-~l~~k-----~~~i~Gs~  154 (172)
T d1h2ba2         104 AMDFVGSQ---------------AT---VDYTPYLLGRMGRLIIVGYGGELRFPTI-RVISS-----EVSFEGSL  154 (172)
T ss_dssp             EEESSCCH---------------HH---HHHGGGGEEEEEEEEECCCSSCCCCCHH-HHHHT-----TCEEEECC
T ss_pred             EEEecCcc---------------hH---HHHHHHHHhCCCEEEEEeCcccccCCHH-HHHhC-----CcEEEEEE
Confidence            99997533               11   1122333458888888865544322221 22222     25788884

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=85.56  E-value=0.2  Score=40.95  Aligned_cols=35  Identities=26%  Similarity=0.220  Sum_probs=30.3

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      +..+|+|||| |..|...|..+++.+.  +++++|...
T Consensus         4 k~~dVvIIGG-GpaGl~AA~~~ar~g~--~v~iie~~~   38 (190)
T d1trba1           4 KHSKLLILGS-GPAGYTAAVYAARANL--QPVLITGME   38 (190)
T ss_dssp             EEEEEEEECC-SHHHHHHHHHHHTTTC--CCEEECCSS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHcCC--ceEEEEeec
Confidence            4569999999 9999999999999888  888998654

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=85.18  E-value=0.35  Score=43.01  Aligned_cols=33  Identities=18%  Similarity=0.209  Sum_probs=30.6

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ..|+|||| |..|...+..|++.++  +++++|...
T Consensus         8 ~dV~IIGA-G~sGl~~a~~L~~~G~--~v~i~Ek~~   40 (298)
T d1w4xa1           8 VDVLVVGA-GFSGLYALYRLRELGR--SVHVIETAG   40 (298)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSS
T ss_pred             CCEEEECc-cHHHHHHHHHHHhCCC--CEEEEEcCC
Confidence            58999999 9999999999999998  899999876

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=85.01  E-value=0.24  Score=42.38  Aligned_cols=33  Identities=21%  Similarity=0.187  Sum_probs=30.6

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ..|+|||| |..|...|..|++.+.  ++.|+|.+.
T Consensus         5 ~DViIIGa-G~aGl~aA~~la~~G~--~V~vlEk~~   37 (253)
T d2gqfa1           5 SENIIIGA-GAAGLFCAAQLAKLGK--SVTVFDNGK   37 (253)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSS
T ss_pred             CcEEEECc-CHHHHHHHHHHHHCCC--cEEEEecCC
Confidence            47999999 9999999999999997  899999876

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=84.84  E-value=2.6  Score=32.35  Aligned_cols=86  Identities=15%  Similarity=0.192  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCC---CccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551           19 AGFKVAILGAA---GGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP   95 (369)
Q Consensus        19 ~~~KI~IiGA~---G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~   95 (369)
                      ++..|+|||||   +..|..+...|...+ -.+|+.+......     +      ..++.+   .++.+-=...|.+++.
T Consensus         7 ~PksIAVVGaS~~~~~~g~~v~~~L~~~~-~g~v~pVnP~~~~-----i------~G~~~y---~sl~dlp~~vDlvvi~   71 (129)
T d2csua1           7 NPKGIAVIGASNDPKKLGYEVFKNLKEYK-KGKVYPVNIKEEE-----V------QGVKAY---KSVKDIPDEIDLAIIV   71 (129)
T ss_dssp             SCSEEEEETCCSCTTSHHHHHHHHHTTCC-SSEEEEECSSCSE-----E------TTEECB---SSTTSCSSCCSEEEEC
T ss_pred             CCCeEEEEccCCCCCCcHHHHHHHHHHcC-CCcEEEeccCccc-----c------CCeEee---cchhhcCCCCceEEEe
Confidence            56799999998   677877777776544 4588888875310     1      112222   2332222467888887


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEE
Q 017551           96 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL  135 (369)
Q Consensus        96 ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv  135 (369)
                      .  |              .+.+.++.+++.+..-++.+++
T Consensus        72 v--p--------------~~~~~~~~~~~~~~g~~~~vi~   95 (129)
T d2csua1          72 V--P--------------KRFVKDTLIQCGEKGVKGVVII   95 (129)
T ss_dssp             S--C--------------HHHHHHHHHHHHHHTCCEEEEC
T ss_pred             c--C--------------hHHhHHHHHHHHHcCCCEEEEe
Confidence            3  2              2344455566666665554443

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=84.53  E-value=1.4  Score=35.48  Aligned_cols=76  Identities=16%  Similarity=0.158  Sum_probs=47.9

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcccCCCeEEEEeCCCC-hhhhc-----CCC
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQ-LENAL-----TGM   89 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~~~~v~~~~~t~d-l~~al-----~~A   89 (369)
                      .++..+|+|+|+ |.+|...+..++..+. .+|+..|.++. ...+.++.-.   ..+. +...++ .++..     .+.
T Consensus        25 ~~~G~~VlV~Ga-GgvGl~a~~~ak~~G~-~~Vi~~d~~~~kl~~a~~lGa~---~~i~-~~~~d~~~~~~~~~~~~~G~   98 (174)
T d1p0fa2          25 VTPGSTCAVFGL-GGVGFSAIVGCKAAGA-SRIIGVGTHKDKFPKAIELGAT---ECLN-PKDYDKPIYEVICEKTNGGV   98 (174)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHHTC-SEEEEECSCGGGHHHHHHTTCS---EEEC-GGGCSSCHHHHHHHHTTSCB
T ss_pred             CCCCCEEEEECC-CchhHHHHHHHHHcCC-ceeeccCChHHHHHHHHHcCCc---EEEc-CCCchhHHHHHHHHhcCCCC
Confidence            455679999998 9999999988887773 48999999873 3344443211   1111 111111 22222     479


Q ss_pred             cEEEEcCCC
Q 017551           90 DLVIIPAGV   98 (369)
Q Consensus        90 DiVii~ag~   98 (369)
                      |+||.+.|.
T Consensus        99 d~vid~~g~  107 (174)
T d1p0fa2          99 DYAVECAGR  107 (174)
T ss_dssp             SEEEECSCC
T ss_pred             cEEEEcCCC
Confidence            999998754

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=84.20  E-value=0.41  Score=37.78  Aligned_cols=31  Identities=29%  Similarity=0.305  Sum_probs=26.0

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ||+|||| |.+|.-+|..|.+ +.  ++.+++...
T Consensus         2 rVvIIGg-G~~G~e~A~~l~~-~~--~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVGN-GPGGFELAKQLSQ-TY--EVTVIDKEP   32 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHTT-TS--EEEEECSSS
T ss_pred             eEEEECC-cHHHHHHHHHHHc-CC--CEEEEeccc
Confidence            8999999 9999999988864 33  899998643

>d2at2a2 c.78.1.1 (A:145-295) Aspartate carbamoyltransferase catalytic subunit {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Aspartate carbamoyltransferase catalytic subunit
species: Bacillus subtilis [TaxId: 1423]

Probab=84.09  E-value=0.85  Score=36.36  Aligned_cols=62  Identities=13%  Similarity=0.183  Sum_probs=42.8

Q ss_pred             CCEEEEEcC--CCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551           20 GFKVAILGA--AGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP   95 (369)
Q Consensus        20 ~~KI~IiGA--~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~   95 (369)
                      ..||+++|=  .+.+..+++..+..-|.  ++++......       ...  ...+..+   .++++++++||+|..+
T Consensus         3 gl~i~~vGD~~~srv~~Sl~~~~~~~g~--~~~i~~P~~~-------~~~--~~~~~~~---~~~~ea~~~aDviy~~   66 (151)
T d2at2a2           3 GLTVSIHGDIKHSRVARSNAEVLTRLGA--RVLFSGPSEW-------QDE--ENTFGTY---VSMDEAVESSDVVMLL   66 (151)
T ss_pred             CCEEEEEcCCCCCHHHHHHHHHHHHcCC--cccccCCchh-------hcc--ccceeEE---EechhccccCceeeee
Confidence            579999997  45588888888887776  7777776531       110  1123332   4567999999999886

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=83.95  E-value=0.72  Score=34.63  Aligned_cols=38  Identities=16%  Similarity=0.085  Sum_probs=29.8

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHh-CCCCcEEEEEeCCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKI-NPLVSVLHLYDVVN   56 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~-~~~~~el~L~D~~~   56 (369)
                      ..+.||+|||| |.+|.-+|..+.. .....+|.+++..+
T Consensus        16 ~~p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          16 EAPKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             SCCSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             ccCCeEEEECC-ChHHHHHHHHhHhhcccccccceecccc
Confidence            34679999999 9999999977654 33455999999765

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=83.86  E-value=0.74  Score=36.57  Aligned_cols=35  Identities=20%  Similarity=0.228  Sum_probs=28.0

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV   55 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~   55 (369)
                      ..+|+|||| |.+|.-+|..|...+.-..|.+.+..
T Consensus         3 ~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~~~   37 (185)
T d1q1ra1           3 NDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVGDA   37 (185)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred             CCCEEEECC-cHHHHHHHHHHHHcCCceEEEEecCc
Confidence            469999999 99999999999998764456555543

>d1duvg2 c.78.1.1 (G:151-333) Ornithine transcarbamoylase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Escherichia coli [TaxId: 562]

Probab=83.71  E-value=2.9  Score=33.85  Aligned_cols=71  Identities=13%  Similarity=0.249  Sum_probs=46.3

Q ss_pred             CCEEEEEcCC-CccHHHHHHHHHhCCCCcEEEEEeCCC--c-hhH---HHHhhcccCCCeEEEEeCCCChhhhcCCCcEE
Q 017551           20 GFKVAILGAA-GGIGQPLAMLMKINPLVSVLHLYDVVN--T-PGV---TADISHMDTGAVVRGFLGQPQLENALTGMDLV   92 (369)
Q Consensus        20 ~~KI~IiGA~-G~vGs~la~~l~~~~~~~el~L~D~~~--~-~g~---~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiV   92 (369)
                      ..||+++|=+ ..|..+++..+..-|.  +|+++-...  . ...   +.+.... ....+..   +.|.+++++++|+|
T Consensus         5 ~l~i~~vGD~~nnv~~Sli~~~~~~g~--~l~~~~P~~~~~~~~~~~~~~~~~~~-~g~~~~~---~~d~~~a~~~aDvv   78 (183)
T d1duvg2           5 EMTLVYAGDARNNMGNSMLEAAALTGL--DLRLVAPQACWPEAALVTECRALAQQ-NGGNITL---TEDVAKGVEGADFI   78 (183)
T ss_dssp             GCEEEEESCTTSHHHHHHHHHHHHHCC--EEEEECCGGGCCCHHHHHHHHHHHHH-TTCEEEE---ESCHHHHHTTCSEE
T ss_pred             CCEEEEEcCCccHHHHHHHHHHHHcCC--EEEEEechHhhhhHHHHHHHHHHHHh-cCCceEE---EechhhccccCCEE
Confidence            4799999951 2566777777766676  999998765  1 111   1222221 2345554   35788999999999


Q ss_pred             EEcC
Q 017551           93 IIPA   96 (369)
Q Consensus        93 ii~a   96 (369)
                      ...-
T Consensus        79 yt~~   82 (183)
T d1duvg2          79 YTDV   82 (183)
T ss_dssp             EECC
T ss_pred             EEEe
Confidence            8874

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=83.68  E-value=2.1  Score=32.40  Aligned_cols=94  Identities=13%  Similarity=0.057  Sum_probs=54.6

Q ss_pred             EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCCh----hhhcCCCcEEEEcCC
Q 017551           22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQL----ENALTGMDLVIIPAG   97 (369)
Q Consensus        22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl----~~al~~ADiVii~ag   97 (369)
                      .|.|+|. |.+|+.++..|..  .  +++++|.++....  .+..... .-+.+  ..++.    +..+..|+.+|++..
T Consensus         2 HivI~G~-g~~g~~l~~~L~~--~--~i~vi~~d~~~~~--~~~~~~~-~~i~G--d~~~~~~L~~a~i~~A~~vi~~~~   71 (129)
T d2fy8a1           2 HVVICGW-SESTLECLRELRG--S--EVFVLAEDENVRK--KVLRSGA-NFVHG--DPTRVSDLEKANVRGARAVIVNLE   71 (129)
T ss_dssp             CEEEESC-CHHHHHHHHTSCG--G--GEEEEESCTTHHH--HHHHTTC-EEEES--CTTSHHHHHHTTCTTCSEEEECCS
T ss_pred             EEEEECC-CHHHHHHHHHHcC--C--CCEEEEcchHHHH--HHHhcCc-ccccc--ccCCHHHHHHhhhhcCcEEEEecc
Confidence            5889999 9999999988743  2  5688898873222  2222111 11221  12332    134688999999741


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec-CCC
Q 017551           98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS-NPV  140 (369)
Q Consensus        98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t-NPv  140 (369)
                      -         |  ..|+.    ++..+++.+|+..++..+ +|-
T Consensus        72 ~---------d--~~n~~----~~~~~r~~~~~~~iia~~~~~~  100 (129)
T d2fy8a1          72 S---------D--SETIH----CILGIRKIDESVRIIAEAERYE  100 (129)
T ss_dssp             S---------H--HHHHH----HHHHHHHHCSSSCEEEECSSGG
T ss_pred             c---------h--hhhHH----HHHHHHHHCCCceEEEEEcCHH
Confidence            1         1  33443    344567788997555554 454

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=83.42  E-value=0.42  Score=38.41  Aligned_cols=37  Identities=24%  Similarity=0.215  Sum_probs=27.7

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      |++|+|+|++|+||.+..-.+.+++---+|+.+--+.
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~   38 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR   38 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC
Confidence            5799999999999999888887775322555554443

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=83.39  E-value=0.34  Score=39.70  Aligned_cols=34  Identities=18%  Similarity=0.236  Sum_probs=29.4

Q ss_pred             CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      ..+|+|||| |..|...|..+++.+.  +++++|...
T Consensus         5 ~~~VvIIGg-GpaGl~aA~~~ar~g~--~v~vie~~~   38 (192)
T d1vdca1           5 NTRLCIVGS-GPAAHTAAIYAARAEL--KPLLFEGWM   38 (192)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHHTTC--CCEEECCSS
T ss_pred             cceEEEECC-CHHHHHHHHHHHHcCC--cEEEEEeec
Confidence            469999999 9999999999999887  788888543

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=82.15  E-value=0.95  Score=34.04  Aligned_cols=38  Identities=16%  Similarity=0.068  Sum_probs=29.4

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCC-CCcEEEEEeCCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVN   56 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~-~~~el~L~D~~~   56 (369)
                      ..+.+|+|||| |.+|.-+|..+...+ ...++.|++..+
T Consensus        18 ~~p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          18 EPPRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             SCCSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             hcCCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            34579999999 999999997765433 334899999765

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=81.89  E-value=1.4  Score=35.09  Aligned_cols=78  Identities=18%  Similarity=0.192  Sum_probs=46.7

Q ss_pred             CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHhhcccCCCeEEEEeCCCChhhhc-----CCCc
Q 017551           17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENAL-----TGMD   90 (369)
Q Consensus        17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-~~g~~~dL~~~~~~~~v~~~~~t~dl~~al-----~~AD   90 (369)
                      .++...|.|.|+ |.+|...+..++..+. ..|+..|.++ ....+.+|.-..   .+......++..+.+     .++|
T Consensus        26 ~~~G~tVlI~Ga-GGvG~~aiq~ak~~G~-~~vi~~~~~~~k~~~ak~lGa~~---~i~~~~~~~~~~~~~~~~~~~g~D  100 (176)
T d2fzwa2          26 LEPGSVCAVFGL-GGVGLAVIMGCKVAGA-SRIIGVDINKDKFARAKEFGATE---CINPQDFSKPIQEVLIEMTDGGVD  100 (176)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHHTC-SEEEEECSCGGGHHHHHHHTCSE---EECGGGCSSCHHHHHHHHTTSCBS
T ss_pred             CCCCCEEEEecc-hhHHHHHHHHHHHHhc-CceEEEcccHHHHHHHHHhCCcE---EEeCCchhhHHHHHHHHHcCCCCc
Confidence            345579999999 8899998888887763 3788888876 333444443111   111101112222222     6799


Q ss_pred             EEEEcCCCC
Q 017551           91 LVIIPAGVP   99 (369)
Q Consensus        91 iVii~ag~p   99 (369)
                      +||.+.|.+
T Consensus       101 ~vid~~G~~  109 (176)
T d2fzwa2         101 YSFECIGNV  109 (176)
T ss_dssp             EEEECSCCH
T ss_pred             EeeecCCCH
Confidence            999987533

>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: GTPase domain of the signal sequence recognition protein Ffh
species: Archaeon Acidianus ambivalens [TaxId: 2283]

Probab=81.79  E-value=12  Score=30.86  Aligned_cols=138  Identities=15%  Similarity=0.200  Sum_probs=65.5

Q ss_pred             CCCCEEEEEcCCCccHHHH-----HHHHHhCCCCcEEEEEeCCC-chhHHHHhh---cccCCCeEEEEeCCCChhh----
Q 017551           18 AAGFKVAILGAAGGIGQPL-----AMLMKINPLVSVLHLYDVVN-TPGVTADIS---HMDTGAVVRGFLGQPQLEN----   84 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~l-----a~~l~~~~~~~el~L~D~~~-~~g~~~dL~---~~~~~~~v~~~~~t~dl~~----   84 (369)
                      +++.-|.++|. -++|-+.     |..+..++.  .+.|+-.|. ..|-...|.   +.. ...+.......++.+    
T Consensus        10 k~p~vi~lvGp-tGvGKTTTiAKLA~~~~~~g~--kV~lit~Dt~R~ga~eQL~~~a~~l-~v~~~~~~~~~~~~~~~~~   85 (211)
T d1j8yf2          10 KIPYVIMLVGV-QGTGKATTAGKLAYFYKKKGF--KVGLVGADVYRPAALEQLQQLGQQI-GVPVYGEPGEKDVVGIAKR   85 (211)
T ss_dssp             SSSEEEEEECS-CCC----HHHHHHHHHHHTTC--CEEEEECCCSSHHHHHHHHHHHHHH-TCCEECCTTCCCHHHHHHH
T ss_pred             CCCEEEEEECC-CCCCHHHHHHHHHHHHHHCCC--ceEEEEeeccccchhHHHHHhcccc-CcceeecccchhhhHHHHH
Confidence            44556778898 4577653     345555665  677777765 222222222   222 223332212234322    


Q ss_pred             -----hcCCCcEEEE-cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCC
Q 017551           85 -----ALTGMDLVII-PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYD  158 (369)
Q Consensus        85 -----al~~ADiVii-~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~  158 (369)
                           ...++|+|++ |+|.....  +       ....+.++.+..+...|+-.+++.+-..+.-..-  .+..++..++
T Consensus        86 a~~~~~~~~~d~IlIDTaGr~~~~--~-------~~~~~~el~~~~~~~~~~~~~LVl~a~~~~~~~~--~~~~~~~~~~  154 (211)
T d1j8yf2          86 GVEKFLSEKMEIIIVDTAGRHGYG--E-------EAALLEEMKNIYEAIKPDEVTLVIDASIGQKAYD--LASKFNQASK  154 (211)
T ss_dssp             HHHHHHHTTCSEEEEECCCSCCTT--C-------HHHHHHHHHHHHHHHCCSEEEEEEEGGGGGGHHH--HHHHHHHHCT
T ss_pred             HHHHhhccCCceEEEecCCcCccc--h-------hhHHHHHHHHHHhhcCCceEEEEEecccCcchHH--HHhhhhcccC
Confidence                 2578899999 77753211  1       1122334444444456877666665444332211  1222333345


Q ss_pred             CCcEEEechhcHH
Q 017551          159 PKKLLGVTMLDVV  171 (369)
Q Consensus       159 ~~kviG~t~Ld~~  171 (369)
                      .+.+| +|-+|..
T Consensus       155 ~~~lI-~TKlDet  166 (211)
T d1j8yf2         155 IGTII-ITKMDGT  166 (211)
T ss_dssp             TEEEE-EECTTSC
T ss_pred             cceEE-EecccCC
Confidence            55555 6777764

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=81.77  E-value=0.51  Score=41.40  Aligned_cols=33  Identities=27%  Similarity=0.326  Sum_probs=28.4

Q ss_pred             CEEEEEcCCCccHHHHHHHHHh-----CCCCcEEEEEeCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKI-----NPLVSVLHLYDVVN   56 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~-----~~~~~el~L~D~~~   56 (369)
                      .-|+|||| |-+|.++|..|++     .|+  ++.++|...
T Consensus         8 yDV~IvGa-G~aGl~lA~~La~~~~~~~G~--~v~vlEr~~   45 (360)
T d1pn0a1           8 CDVLIVGA-GPAGLMAARVLSEYVRQKPDL--KVRIIDKRS   45 (360)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHHHHHSTTC--CEEEECSSS
T ss_pred             CCEEEECc-CHHHHHHHHHHHhcccccCCC--cEEEEcCCC
Confidence            47999999 9999999999974     567  899999764

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=81.65  E-value=0.56  Score=38.68  Aligned_cols=33  Identities=12%  Similarity=0.114  Sum_probs=29.7

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      .-|+|||| |..|...|..+++.+.  +++|+|.+.
T Consensus         3 yDvvVIG~-G~aG~~aA~~a~~~G~--kV~iiE~~~   35 (217)
T d1gesa1           3 YDYIAIGG-GSGGIASINRAAMYGQ--KCALIEAKE   35 (217)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTTTC--CEEEEESSC
T ss_pred             CCEEEECC-CHHHHHHHHHHHHCCC--EEEEEeccC
Confidence            46899999 9999999999999988  899999765

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=81.25  E-value=1.4  Score=31.06  Aligned_cols=37  Identities=16%  Similarity=0.231  Sum_probs=29.5

Q ss_pred             CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      .+..+|.|.||+|.||+.....++..+.  ++.-.-..+
T Consensus        30 ~~~~~vlI~gasGgVG~~aiQlak~~G~--~Vi~~t~s~   66 (77)
T d1o8ca2          30 PQDGEIVVTGASGGVGSTAVALLHKLGY--QVVAVSGRE   66 (77)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHTTC--CEEEEESCG
T ss_pred             cCCCcEEEEeCCCcHHHHHHHHHHHcCC--eEEEEECCH
Confidence            4557899999999999999998888886  666655443

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=81.17  E-value=0.66  Score=38.31  Aligned_cols=35  Identities=17%  Similarity=0.132  Sum_probs=31.1

Q ss_pred             CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      +..-|+|||| |..|.+.|..+++.+.  ++.|+|..+
T Consensus         4 ~~yDviVIG~-GpAGl~aA~~aa~~G~--kV~lie~~~   38 (233)
T d1v59a1           4 KSHDVVIIGG-GPAGYVAAIKAAQLGF--NTACVEKRG   38 (233)
T ss_dssp             EEEEEEEECC-SHHHHHHHHHHHHTTC--CEEEEESSS
T ss_pred             cccCEEEECC-CHHHHHHHHHHHHCCC--cEEEEEecC
Confidence            4457999999 9999999999999998  999999765

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=81.13  E-value=6.7  Score=29.27  Aligned_cols=33  Identities=15%  Similarity=0.130  Sum_probs=26.9

Q ss_pred             CEEEEEcCC---CccHHHHHHHHHhCCCCcEEEEEeCC
Q 017551           21 FKVAILGAA---GGIGQPLAMLMKINPLVSVLHLYDVV   55 (369)
Q Consensus        21 ~KI~IiGA~---G~vGs~la~~l~~~~~~~el~L~D~~   55 (369)
                      +.|+|||||   +..|..+...|++.++  +|+.+..+
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~--~V~pVnP~   37 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGF--EVLPVNPN   37 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTC--EEEEECTT
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCC--EEEEEccc
Confidence            479999996   4568888889999998  88888754

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=80.67  E-value=0.91  Score=39.38  Aligned_cols=36  Identities=22%  Similarity=0.190  Sum_probs=31.4

Q ss_pred             CCCEEEEEcCCC--ccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551           19 AGFKVAILGAAG--GIGQPLAMLMKINPLVSVLHLYDVVN   56 (369)
Q Consensus        19 ~~~KI~IiGA~G--~vGs~la~~l~~~~~~~el~L~D~~~   56 (369)
                      +.+++.|+||+|  +||..++..|++.|.  +|++.|.+.
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga--~Vvi~~~~~   44 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGA--EILVGTWVP   44 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTC--EEEEEEEHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC--EEEEEeCch
Confidence            456899999976  799999999999998  999998764

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=80.06  E-value=0.69  Score=39.96  Aligned_cols=33  Identities=21%  Similarity=0.308  Sum_probs=29.1

Q ss_pred             CEEEEEcCCCccHHHHHHHHHhC-CCCcEEEEEeCCC
Q 017551           21 FKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN   56 (369)
Q Consensus        21 ~KI~IiGA~G~vGs~la~~l~~~-~~~~el~L~D~~~   56 (369)
                      .-|+|||| |..|...|..|+++ ++  +++++|...
T Consensus        34 ~DViVIGa-GpaGL~aA~~LA~~~G~--~V~vlE~~~   67 (278)
T d1rp0a1          34 TDVVVVGA-GSAGLSAAYEISKNPNV--QVAIIEQSV   67 (278)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTSTTS--CEEEEESSS
T ss_pred             CCEEEECC-CHHHHHHHHHHHHccCC--eEEEEecCC
Confidence            36999999 99999999999874 78  999999865