Citrus Sinensis ID: 017665

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------37
Protein Sequence
MVCIKNPESALPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIYRKSHVSLPTSAGAASDHDLEEEEEKFNLHDTLLPILRSPPSHNTTLNPQKSSSFSNLLDAMDYSMLSNFLSENQTSHTGSESNPLFNSGILEQHHSSFNNGNGNGANTNTSCTNSFLIQKLPQLNYSVSNNMENQQHKRPHPNIDHHENMLHPSKKFITTCSFSSSTTDQFDPPYNYLHQPFLTQQLLLSPHLQFQG
Secondary Structure (PSIPRED)
ccccccccccccccccccccHHHHHHHHHHHHHcccccccccEEEEEcccccccccccccccccccEEEcccccccccccccccccccccccccccccccEEEccccccccEEEEEEccEEcccccccccccccEEEEccccccccccccccccccccccccccEEEEEEEEEccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccHHHHHHHHHHHHHcccccccEEEEEEEccccccccccHHccccccEEEEEccccccccccccccHccccccEEccccccccccccccccccEEEEEEEEEEEcccccccccccEEEEEEEEcccccccccccccccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccc
Coil and Loop (DISEMBL)
mvciknpesalppgfrfhptDEELILHYLKKKvasmpfpvsiiadvdiykfdpwdlpakaafgekewyffsprdrkypngarpnraaasgywkatgtdkiILATSVGAHQENIGVKKALVFykgrppkgvktnwIMHEYRlaenpknlnhtkmrpkdssmrlddWVLCRIYrkshvslptsagaasdhdleeeeekfnlhdtllpilrsppshnttlnpqksssfsnlldaMDYSMLSNFLsenqtshtgsesnplfnsgileqhhssfnngngngantntsctnsfliqklpqlnysvsnnmenqqhkrphpnidhhenmlhpskkfittcsfsssttdqfdppynylhqpfltqqlllsphlqfqg
Flexible Loop (DISEMBL)
mvciknpesalppgfrfhPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAafgekewyffsprdrkypngarpNRAAASGYWKATGTDKIILATsvgahqenigVKKALVFYKGRPPKGVKTNWIMHEyrlaenpknlnhtkmrpkdssmrlDDWVLCRIYRKSHVSLPTSAGAASDHDLEEEEEKFNLHDTLLPILRSPPSHNTTLNPQKSSSFSNLLDAMDYSMLSNFLSENQTSHTGSESNPLFNSGILEQHHSSFNNGNGNGANTNTSCTNSFLIQKLPQLNYSVSNNMENQQHKRPHPNIDHHENMLHPSKKFITTCSFSSSTTDQFDPPYNYLHQPFLTQQLLLSPHLQFQG
Low Complexity Region (SEG)
MVCIKNPESALPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIYRKSHVSLPTSAGAASDHDLEEEEEKFNLHDTLLPILRSPPSHNTTLNPQKSSSFSNLLDAMDYSMLSNFLSENQTSHTGSESNPLFNSGILEQHHssfnngngngantntsctnsFLIQKLPQLNYSVSNNMENQQHKRPHPNIDHHENMLHPSKKFIttcsfsssttDQFDPPYNYLHQPFLTQQLLLSPHLQFQG
Disordered region (IsUnstruct)
**************FRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFGEKEWYFFSPRD***********AAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGVKTNWIMHEYRLA*******************LDDWVLCRIYRKSHV***********************************************************************************************************TNSFLIQKL***********************************FITTCSF******QFDPPYNYLHQPFLTQQLLL********
Disordered Region (DISOPRED)
************PGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGVKTNWIMHEYRLAEN******************DDWVLCRIYR************************************************************************************************************************************************************************************FL**************
Disordered Region (DISEMBL)
MVCIKNPESALPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIYRKSHVS*******************FNLHDTLLPILRSPPSHNTTLNPQKSSSFSNLLDAMDYSMLSNFLSE**********NPLFNSGILEQHHSSFNNGNGNGANTNTSCTNSFLIQKLPQLNYSVSNNMENQQHKRPHPNIDHHENMLHPSKKFITTCSFSSSTTDQFDPPYNYLHQPFLTQQLLLSPHLQFQG
Disordered Region (DISPRO)
*********ALPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGVKTNWIMHEYRLAEN**************SMRLDDWVLCRIYRKSH*****************************************************LDAMDYSMLSNFLS*************************SFNNGNGNGANTNTSCTNSFLIQKLPQLNYSVSN***************************************QFDPPYNYLHQPFLTQQLLLSPHLQF**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVCIKNPESALPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIYRKSHVSLPTSAGAASDHDLEEEEEKFNLHDTLLPILRSPPSHNTTLNPQKSSSFSNLLDAMDYSMLSNFLSENQTSHTGSESNPLFNSGILEQHHSSFNNGNGNGANTNTSCTNSFLIQKLPQLNYSVSNNMENQQHKRPHPNIDHHENMLHPSKKFITTCSFSSSTTDQFDPPYNYLHQPFLTQQLLLSPHLQFQG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	368	2.2.26 [Sep-21-2011]
D2SMN4	406	NAC transcription factor	N/A	no	0.486	0.440	0.651	9e-71
Q8H4S4	425	NAC transcription factor	no	no	0.459	0.397	0.684	2e-70
A2YMR0	425	NAC transcription factor	N/A	no	0.459	0.397	0.673	4e-70
A0SPJ6	396	NAC transcription factor	N/A	no	0.437	0.406	0.702	4e-70
A0SPJ9	402	NAC transcription factor	N/A	no	0.437	0.400	0.702	6e-70
A0SPJ8	406	NAC transcription factor	N/A	no	0.486	0.440	0.645	6e-70
A0SPJ3	405	NAC transcription factor	N/A	no	0.442	0.402	0.697	3e-69
A0SPJ4	405	NAC transcription factor	N/A	no	0.442	0.402	0.691	4e-68
Q8GY42	323	NAC transcription factor	no	no	0.475	0.541	0.648	1e-66
O49255	268	NAC transcription factor	no	no	0.671	0.921	0.522	2e-65

>sp|D2SMN4|NAMB1_HORVS NAC transcription factor NAM-B1 OS=Hordeum vulgare subsp. spontaneum GN=NAM-B1 PE=4 SV=1

 Score =  267 bits (683), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 125/192 (65%), Positives = 144/192 (75%), Gaps = 13/192 (6%)

Query: 11  LPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFGEKEWYFF 70
           LPPGFRFHPTDEEL++HYLKKK A  P PV+IIA+VD+YKFDPW+LP KA FGE EWYFF
Sbjct: 35  LPPGFRFHPTDEELVVHYLKKKAAKAPLPVTIIAEVDLYKFDPWELPEKATFGEHEWYFF 94

Query: 71  SPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGV 130
           SPRDRKYPNGARPNRAA SGYWKATGTDK ILA++ G  +E +GVKKALVFY+G+PP+G+
Sbjct: 95  SPRDRKYPNGARPNRAATSGYWKATGTDKPILASATGCGREKVGVKKALVFYRGKPPRGL 154

Query: 131 KTNWIMHEYRLAENPKNLNHTKMRP-------KDSSMRLDDWVLCRIYRKSHVSLPTSAG 183
           KTNWIMHEYRL         T   P         +S+RLDDWVLCRIY+K      TS  
Sbjct: 155 KTNWIMHEYRLTGASAGSTTTSRPPPVTGGSRAPASLRLDDWVLCRIYKK------TSKA 208

Query: 184 AASDHDLEEEEE 195
           AA+  D +   E
Sbjct: 209 AAAVGDEQRSME 220

Transcription factor of the NAC family associated with the grain protein content (GPC). Sequences of the 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.
Hordeum vulgare subsp. spontaneum (taxid: 77009)

>sp|Q8H4S4|NAC10_ORYSJ NAC transcription factor ONAC010 OS=Oryza sativa subsp. japonica GN=ONAC010 PE=2 SV=1

 Score =  266 bits (681), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 126/184 (68%), Positives = 146/184 (79%), Gaps = 15/184 (8%)

Query: 5   KNPESA--LPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAF 62
           + P SA  LPPGFRFHPTDEEL++HYLKKK AS+P PV+IIA+VD+YKFDPWDLP KA F
Sbjct: 21  QQPGSAPELPPGFRFHPTDEELVVHYLKKKAASVPLPVTIIAEVDLYKFDPWDLPEKANF 80

Query: 63  GEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFY 122
           GE+EWYFFSPRDRKYPNGARPNRAA SGYWKATGTDK I+  S G+ +E +GVKKALVFY
Sbjct: 81  GEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIM--SSGSTREKVGVKKALVFY 138

Query: 123 KGRPPKGVKTNWIMHEYRLAENPKNLN--HTKMRP---------KDSSMRLDDWVLCRIY 171
           +G+PPKGVKTNWIMHEYRL +   +     T  RP            S+RLDDWVLCRIY
Sbjct: 139 RGKPPKGVKTNWIMHEYRLTDTSSSAAAVATTRRPPPPITGGSKGAVSLRLDDWVLCRIY 198

Query: 172 RKSH 175
           +K++
Sbjct: 199 KKTN 202

Transcription factor of the NAC family associated with male fertility. Involved in anther development, but not in senescence. Reduced expression of NAC5 via RNAi leads to male-sterility.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A2YMR0|NAC10_ORYSI NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica GN=ONAC010 PE=3 SV=1

 Score =  265 bits (677), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 124/184 (67%), Positives = 148/184 (80%), Gaps = 15/184 (8%)

Query: 5   KNPESA--LPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAF 62
           + P SA  LPPGFRFHPTDEEL++HYLKKK AS+P PV+IIA+VD+YKFDPW+LP KA F
Sbjct: 21  QQPGSAPELPPGFRFHPTDEELVVHYLKKKAASVPLPVTIIAEVDLYKFDPWELPEKANF 80

Query: 63  GEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFY 122
           GE+EWYFFSPRDRKYPNGARPNRAA SGYWKATGTDK I+A+  G+ +E +GVKKALVFY
Sbjct: 81  GEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIMAS--GSTREKVGVKKALVFY 138

Query: 123 KGRPPKGVKTNWIMHEYRLAENPKN---LNHTKMRP--------KDSSMRLDDWVLCRIY 171
           +G+PPKGVKTNWIMHEYRL +   +   +  T+  P           S+RLDDWVLCRIY
Sbjct: 139 RGKPPKGVKTNWIMHEYRLTDTSSSAAAVATTRQPPPPITGGSRGAVSLRLDDWVLCRIY 198

Query: 172 RKSH 175
           +K++
Sbjct: 199 KKTN 202

Transcription factor of the NAC family associated with male fertility.

Oryza sativa subsp. indica (taxid: 39946)

>sp|A0SPJ6|NAMB2_TRIDB NAC transcription factor NAM-B2 OS=Triticum durum GN=NAM-B2 PE=2 SV=1

 Score =  265 bits (677), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 118/168 (70%), Positives = 140/168 (83%), Gaps = 7/168 (4%)

Query: 11  LPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFGEKEWYFF 70
           LPPGFRFHPTDEEL++HYLKKK A +P PV+II +VD+YKFDPW+LP KA FGE+EWYFF
Sbjct: 28  LPPGFRFHPTDEELVVHYLKKKAAKVPLPVTIITEVDLYKFDPWELPEKATFGEQEWYFF 87

Query: 71  SPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGV 130
           SPRDRKYPNGARPNRAA SGYWKATGTDK ILA+  G  +E +GVKKALVFY+G+PPKG+
Sbjct: 88  SPRDRKYPNGARPNRAATSGYWKATGTDKPILASGCG--REKVGVKKALVFYRGKPPKGL 145

Query: 131 KTNWIMHEYRLAENPKNLNHTKMRP-----KDSSMRLDDWVLCRIYRK 173
           KTNWIMHEYRL +   +   ++  P     + +S+RLDDWVLCRIY+K
Sbjct: 146 KTNWIMHEYRLTDASSSATTSRPPPVTGGSRSASLRLDDWVLCRIYKK 193

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) contains one additional gene encoding for a functional protein (NAM-A1) and one extra pseudogene (NAM-B1) (PubMed:17124321). Plays a weaker role in terminal senescence than NAM-A1.

Triticum durum (taxid: 4567)

>sp|A0SPJ9|NAM2_HORVD NAC transcription factor NAM-2 OS=Hordeum vulgare var. distichum GN=NAM-2 PE=4 SV=1

 Score =  265 bits (676), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 118/168 (70%), Positives = 140/168 (83%), Gaps = 7/168 (4%)

Query: 11  LPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFGEKEWYFF 70
           LPPGFRFHPTDEEL++HYLKKK A +P PV+IIA+VD+YKFDPW+LP KA FGE+EWYFF
Sbjct: 28  LPPGFRFHPTDEELVVHYLKKKAAKVPLPVTIIAEVDLYKFDPWELPEKATFGEQEWYFF 87

Query: 71  SPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGV 130
           SPRDRKYPNGARPNRAA SGYWKATGTDK ILA+  G  +E +GVK ALVFY+G+PPKG+
Sbjct: 88  SPRDRKYPNGARPNRAATSGYWKATGTDKPILASGCG--REKVGVKXALVFYRGKPPKGL 145

Query: 131 KTNWIMHEYRLAENPKNLNHTKMRP-----KDSSMRLDDWVLCRIYRK 173
           KTNWIMHEYRL +   +   ++  P     + +S+RLDDWVLCRIY+K
Sbjct: 146 KTNWIMHEYRLTDASSSAATSRPPPVTGGSRAASLRLDDWVLCRIYKK 193

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. Sequences of 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare var. distichum (taxid: 112509)

>sp|A0SPJ8|NAM1_HORVD NAC transcription factor NAM-1 OS=Hordeum vulgare var. distichum GN=NAM-1 PE=4 SV=1

 Score =  265 bits (676), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 124/192 (64%), Positives = 143/192 (74%), Gaps = 13/192 (6%)

Query: 11  LPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFGEKEWYFF 70
           LPPGFRFHPTDEEL++HYLKKK A  P PV+IIA+VD+YKFDPW+LP KA FGE EWYFF
Sbjct: 35  LPPGFRFHPTDEELVVHYLKKKAAKAPLPVTIIAEVDLYKFDPWELPEKATFGEHEWYFF 94

Query: 71  SPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGV 130
           SPRDRKY NGARPNRAA SGYWKATGTDK ILA++ G  +E +GVKKALVFY+G+PP+G+
Sbjct: 95  SPRDRKYANGARPNRAATSGYWKATGTDKPILASATGCGREKVGVKKALVFYRGKPPRGL 154

Query: 131 KTNWIMHEYRLAENPKNLNHTKMRP-------KDSSMRLDDWVLCRIYRKSHVSLPTSAG 183
           KTNWIMHEYRL         T   P         +S+RLDDWVLCRIY+K      TS  
Sbjct: 155 KTNWIMHEYRLTGASAGSTTTSRPPPVTGGSRAPASLRLDDWVLCRIYKK------TSKA 208

Query: 184 AASDHDLEEEEE 195
           AA+  D +   E
Sbjct: 209 AAAVGDEQRSME 220

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. Sequences of 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare var. distichum (taxid: 112509)

>sp|A0SPJ3|NAMA1_TRIDB NAC transcription factor NAM-A1 OS=Triticum durum GN=NAM-A1 PE=2 SV=1

 Score =  262 bits (670), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 120/172 (69%), Positives = 140/172 (81%), Gaps = 9/172 (5%)

Query: 11  LPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFGEKEWYFF 70
           LPPGFRFHPTDEEL++HYLKKK A +P PV+IIA+VD+YKFDPW+LP KA FGE+EWYFF
Sbjct: 33  LPPGFRFHPTDEELVVHYLKKKAAKVPLPVTIIAEVDLYKFDPWELPEKATFGEQEWYFF 92

Query: 71  SPRDRKYPNGARPNRAAASGYWKATGTDKIILA--TSVGAHQENIGVKKALVFYKGRPPK 128
           SPRDRKYPNGARPNRAA SGYWKATGTDK ILA  T  G  +E +GVKKALVFY+G+PPK
Sbjct: 93  SPRDRKYPNGARPNRAATSGYWKATGTDKPILASGTGCGLVREKLGVKKALVFYRGKPPK 152

Query: 129 GVKTNWIMHEYRLAENPKNLNHTKMRP-------KDSSMRLDDWVLCRIYRK 173
           G+KTNWIMHEYRL +   +   ++  P         +S+RLDDWVLCRIY+K
Sbjct: 153 GLKTNWIMHEYRLTDVSGSTTTSRPPPPVTGGSRAAASLRLDDWVLCRIYKK 204

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) contains one additional gene encoding for a functional protein (NAM-B2) and one extra pseudogene (NAM-B1) (PubMed:17124321).

Triticum durum (taxid: 4567)

>sp|A0SPJ4|NAMB1_TRIDC NAC transcription factor NAM-B1 OS=Triticum dicoccoides GN=NAM-B1 PE=4 SV=1

 Score =  258 bits (660), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 119/172 (69%), Positives = 136/172 (79%), Gaps = 9/172 (5%)

Query: 11  LPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFGEKEWYFF 70
           LPPGFRFHPTDEEL++HYLKKK    P PV+IIA+VD+YKFDPW+LP KA  GE+EWYFF
Sbjct: 34  LPPGFRFHPTDEELVVHYLKKKADKAPLPVNIIAEVDLYKFDPWELPEKATIGEQEWYFF 93

Query: 71  SPRDRKYPNGARPNRAAASGYWKATGTDKIILA--TSVGAHQENIGVKKALVFYKGRPPK 128
           SPRDRKYPNGARPNRAA SGYWKATGTDK ILA  T  G  +E +GVKKALVFY+G+PPK
Sbjct: 94  SPRDRKYPNGARPNRAATSGYWKATGTDKPILASGTGCGLVREKLGVKKALVFYRGKPPK 153

Query: 129 GVKTNWIMHEYRLAENPKNLNHTKMRP-------KDSSMRLDDWVLCRIYRK 173
           G+KTNWIMHEYRL +   +   T   P         +S+RLDDWVLCRIY+K
Sbjct: 154 GLKTNWIMHEYRLTDASGSTTATNRPPPVTGGSRAAASLRLDDWVLCRIYKK 205

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) and the hexaploid wheat (T.aestivum) carry a one bp insertion generating a non-functional allele of this gene. They have a delayed senescence and a lower grain protein, zinc and iron content (PubMed:17124321).

Triticum dicoccoides (taxid: 85692)

>sp|Q8GY42|NAC25_ARATH NAC transcription factor 25 OS=Arabidopsis thaliana GN=NAC025 PE=2 SV=1

 Score =  253 bits (647), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 122/188 (64%), Positives = 143/188 (76%), Gaps = 13/188 (6%)

Query: 11  LPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFGEKEWYFF 70
           LPPGFRFHPTDEEL++HYLKKK  S+P PVSIIA++D+YKFDPW+LP+KA+FGE EWYFF
Sbjct: 16  LPPGFRFHPTDEELVVHYLKKKADSVPLPVSIIAEIDLYKFDPWELPSKASFGEHEWYFF 75

Query: 71  SPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGV 130
           SPRDRKYPNG RPNRAA SGYWKATGTDK I       +   +GVKKALVFY G+PPKG+
Sbjct: 76  SPRDRKYPNGVRPNRAATSGYWKATGTDKPIFT----CNSHKVGVKKALVFYGGKPPKGI 131

Query: 131 KTNWIMHEYRLAENPKNLNHTKMRPKD------SSMRLDDWVLCRIYRKSHVSLPTSAGA 184
           KT+WIMHEYRL +   NL+ T  +P D      +S+RLDDWVLCRIY+K+    PT    
Sbjct: 132 KTDWIMHEYRLTDG--NLS-TAAKPPDLTTTRKNSLRLDDWVLCRIYKKNSSQRPTMERV 188

Query: 185 ASDHDLEE 192
               DL E
Sbjct: 189 LLREDLME 196

Transcription factor of the NAC family. May be associated with anther development and pollen production.

Arabidopsis thaliana (taxid: 3702)

>sp|O49255|NAC29_ARATH NAC transcription factor 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1

 Score =  249 bits (637), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 140/268 (52%), Positives = 172/268 (64%), Gaps = 21/268 (7%)

Query: 8   ESALPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFGEKEW 67
           +S LPPGFRFHPTDEELI++YL+ +  S P PVSII +VDIYKFDPW LP K  FGE EW
Sbjct: 6   QSTLPPGFRFHPTDEELIVYYLRNQTMSKPCPVSIIPEVDIYKFDPWQLPEKTEFGENEW 65

Query: 68  YFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPP 127
           YFFSPR+RKYPNG RPNRAA SGYWKATGTDK I + S      N+GVKKALVFYKGRPP
Sbjct: 66  YFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGS-----SNVGVKKALVFYKGRPP 120

Query: 128 KGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIYRKSHVS-LPTSAGAAS 186
           KG+KT+WIMHEYRL ++ K    TK   ++ SMRLD+WVLCRIY+K   S L        
Sbjct: 121 KGIKTDWIMHEYRLHDSRK--ASTK---RNGSMRLDEWVLCRIYKKRGASKLLNEQEGFM 175

Query: 187 DHDLEEEEEKFNLHDTLLPILRSPPSHNTTLNPQKSSSFSNLLDAMDY----SMLSNFLS 242
           D  L E+E K  +++             T++   ++ S ++LL+ MDY    S + NF  
Sbjct: 176 DEVLMEDETKVVVNEAERRT-EEEIMMMTSMKLPRTCSLAHLLE-MDYMGPVSHIDNFSQ 233

Query: 243 ENQTSHTGSESNPL----FNSGILEQHH 266
            +      SES+      FN   +  HH
Sbjct: 234 FDHLHQPDSESSWFGDLQFNQDEILNHH 261

May function in the transition between active cell division and cell expansion.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	368
224144749	367	NAC domain protein, IPR003441 [Populus t	0.972	0.975	0.604	1e-118
443682296	356	NAC protein 8 [Gossypium hirsutum]	0.940	0.971	0.624	1e-116
224123696	367	NAC domain protein, IPR003441 [Populus t	0.959	0.961	0.637	1e-116
206584347	356	NAC domain protein NAC5 [Gossypium hirsu	0.940	0.971	0.624	1e-116
255568994	365	transcription factor, putative [Ricinus	0.961	0.969	0.651	1e-115
351727585	351	transcriptional factor NAC11 [Glycine ma	0.934	0.980	0.618	1e-115
351723853	353	NAC domain protein [Glycine max] gi|1879	0.942	0.983	0.609	1e-112
356559532	363	PREDICTED: NAC domain-containing protein	0.910	0.922	0.572	1e-102
357508607	340	NAC domain transcription factor [Medicag	0.894	0.967	0.567	1e-102
302399019	373	NAC domain class transcription factor [M	0.932	0.919	0.557	1e-102

>gi|224144749|ref|XP_002325400.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222862275|gb|EEE99781.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 226/374 (60%), Positives = 275/374 (73%), Gaps = 16/374 (4%)

Query: 4   IKNPESALPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFG 63
           +KN +S+LPPGFRFHPTDEELILHYL+KKVAS PFPVSIIADVDIYKFDPWDLPAKAA G
Sbjct: 1   MKNQQSSLPPGFRFHPTDEELILHYLRKKVASTPFPVSIIADVDIYKFDPWDLPAKAALG 60

Query: 64  EKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVG------AHQENIGVKK 117
           EKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDK+I+A+++         QEN+GVKK
Sbjct: 61  EKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKVIMASTITPGGVIIQGQENVGVKK 120

Query: 118 ALVFYKGRPPKGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIYRKSHVS 177
           ALVFYKG+PPKGVKT+WIMHEYRLA+      +  M+P+DSSMRLDDWVLCRIY+K+H  
Sbjct: 121 ALVFYKGKPPKGVKTDWIMHEYRLADTSSYSYNKPMKPRDSSMRLDDWVLCRIYKKAHAL 180

Query: 178 LPTSAGAASDHDLEEEEEKFNLHDTLLPILRSPPSHNTTLNPQKSSSFSNLLDAMDYSML 237
              +    S    +EEEE+  + +  LP L+ P S+ + L  QKS SFSNLLDAMDYS+L
Sbjct: 181 TSCARAEMSSEHEQEEEEEHFVPENPLPSLKGPISNKSALMSQKSCSFSNLLDAMDYSLL 240

Query: 238 SNFLSENQTSHTGSESNPLFNSGILEQHHSSFNNGNGNGANTNTSCTNSFLIQKLPQLNY 297
           S+ L++ Q + TG ESNP  NS   +     F + +         C     +QKLPQL+ 
Sbjct: 241 SSLLADTQFNPTGFESNPALNSTASQLDQPPFFSNSNIAGGGGGGC----FLQKLPQLSA 296

Query: 298 SVSNNMENQQHKRPHPNIDHHENMLHPSKKFITTCSFSSS---TTDQFDPPYNYLHQPFL 354
           S  NN++N+  KR   +ID  E+MLHPSKKF+ +CSF+++   +T   +  YN+L QPFL
Sbjct: 297 SAPNNVDNKL-KRQLSHID--EDMLHPSKKFMNSCSFTNTNNISTQTDNGQYNFLSQPFL 353

Query: 355 TQQLLLSPHLQFQG 368
            QQ LLSPHLQFQG
Sbjct: 354 NQQFLLSPHLQFQG 367

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|443682296|gb|AGC97438.1| NAC protein 8 [Gossypium hirsutum]

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 233/373 (62%), Positives = 283/373 (75%), Gaps = 27/373 (7%)

Query: 4   IKNPESALPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFG 63
           +K+P+S+LPPGFRFHPTDEELILHYLKKK+ S PFPVSIIADVDIYKFDPWDLP KAAFG
Sbjct: 3   MKHPQSSLPPGFRFHPTDEELILHYLKKKITSSPFPVSIIADVDIYKFDPWDLPGKAAFG 62

Query: 64  EKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSV----GAHQENIGVKKAL 119
           EKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDK+I+ +S+    G  QENIGVKKAL
Sbjct: 63  EKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKVIVTSSMADRRGEVQENIGVKKAL 122

Query: 120 VFYKGRPPKGVKTNWIMHEYRLAENP-KNLNHTKMRPKDSSMRLDDWVLCRIYRKSH-VS 177
           VFYKGRPPKG+KT+WIMHEYRLA+NP  N N+  ++ KDSSMRLDDWVLCRIY+KS+ +S
Sbjct: 123 VFYKGRPPKGMKTDWIMHEYRLADNPNSNFNNRPLKSKDSSMRLDDWVLCRIYKKSNALS 182

Query: 178 LPTSAGAA-SDHDLEEEEEKFNLHDTLLP-ILRSPPSHNTTLNPQKSSSFSNLLDAMDYS 235
             T+ GAA SD DLEEEE +  + D LLP  ++SPP+ N  L PQKS SFSNLLDAMDYS
Sbjct: 183 STTAIGAATSDQDLEEEEAEQFIKDALLPAAIKSPPTTNALL-PQKSCSFSNLLDAMDYS 241

Query: 236 MLSNFLSENQTSHTGSESNPLFNSGILEQHHSSFNNGNGNGANTNTSCTNSFLIQKLPQL 295
           MLS+FL++NQ + +G +         L  +++  NN            ++S ++QKLPQL
Sbjct: 242 MLSSFLADNQCNGSGYDPTSFTFEQPLVNNYTIGNN------------SSSMMMQKLPQL 289

Query: 296 NYSVSNNMENQQHKRPHPNIDHHENMLHPSKKFITTCSFSSSTTDQFDPPYNYLHQPFLT 355
           + S+  NMEN+  KR + +ID      HPSKK  ++CS+S+S+T      Y +L+Q    
Sbjct: 290 SPSIP-NMENKL-KRQYSSIDED----HPSKKLNSSCSYSNSSTQSDMTHYTFLNQSLFN 343

Query: 356 QQLLLSPHLQFQG 368
           Q LLLSPH+QFQG
Sbjct: 344 QSLLLSPHIQFQG 356

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224123696|ref|XP_002319143.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222857519|gb|EEE95066.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 241/378 (63%), Positives = 286/378 (75%), Gaps = 25/378 (6%)

Query: 5   KNPESALPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFGE 64
           KNP+S+LPPGFRFHPTDEELILHYLKKK+AS PFPVSIIADVDIYKFDPWDLPAKA+ GE
Sbjct: 1   KNPQSSLPPGFRFHPTDEELILHYLKKKLASTPFPVSIIADVDIYKFDPWDLPAKASLGE 60

Query: 65  KEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATS-----VGAHQENIGVKKAL 119
           KEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKII+A++     V   QENIGVKKAL
Sbjct: 61  KEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIIMASTMAPGGVVGGQENIGVKKAL 120

Query: 120 VFYKGRPPKGVKTNWIMHEYRLAENPK-NLNHTKMRPKDSSMRLDDWVLCRIYRKSHVSL 178
           VFYKG+PPKGVKTNWIMHEYRLA+NP  N N   M+PKDSSMRLDDWVLCRIY+KSH +L
Sbjct: 121 VFYKGKPPKGVKTNWIMHEYRLADNPACNNNKKSMKPKDSSMRLDDWVLCRIYKKSH-AL 179

Query: 179 PTSAGA--ASDHD----LEEEEEKFNLHDTLLPILRSPPSHNTTLNPQKSSSFSNLLDAM 232
            +S  A  +S+HD     EE++++  + +TLLPI     S+   L  QKS SFSNL DAM
Sbjct: 180 TSSPRALISSEHDQEEEEEEQQQQQFVQETLLPI-----SNKNNLMSQKSCSFSNLFDAM 234

Query: 233 DYSMLSNFLSENQTSHTGSESNPLFNSGILEQHHSSFNNGNGNGANTNTSCTNSFLIQKL 292
           DYSM S+FL++   + TG ESNP  NS   +     F+N N    + +TS  +   +QKL
Sbjct: 235 DYSMWSSFLADTPFNPTGFESNPTLNSTATQLDQPFFSNSNSASNSNSTSSGS--FLQKL 292

Query: 293 PQLNYSVSNNMENQQHKRPHPNIDHHENMLHPSKKFITTCSFSSSTTDQFDP--PYNYLH 350
           PQLN S+ N  EN+  KR  P+ID  E++LHPSKKF+ +CSF+++  +       YN++ 
Sbjct: 293 PQLNTSMPNMQENKL-KRQLPHID--EDLLHPSKKFMNSCSFTNTNNNTQTDMGQYNFVS 349

Query: 351 QPFLTQQLLLSPHLQFQG 368
           QPFL QQLLLSPHLQF G
Sbjct: 350 QPFLDQQLLLSPHLQFLG 367

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|206584347|gb|ACI15346.1| NAC domain protein NAC5 [Gossypium hirsutum] gi|206584357|gb|ACI15351.1| NAC domain protein NAC5 [Gossypium hirsutum]

 Score =  423 bits (1087), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 233/373 (62%), Positives = 282/373 (75%), Gaps = 27/373 (7%)

Query: 4   IKNPESALPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFG 63
           +K+P+S+LPPGFRFHPTDEELILHYLKKK+ S PFPVSIIADVDIYKFDPWDLP KAAFG
Sbjct: 3   MKHPQSSLPPGFRFHPTDEELILHYLKKKITSSPFPVSIIADVDIYKFDPWDLPDKAAFG 62

Query: 64  EKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSV----GAHQENIGVKKAL 119
           EKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDK+I+ +S+    G  QENIGVKKAL
Sbjct: 63  EKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKVIVTSSMADRRGEVQENIGVKKAL 122

Query: 120 VFYKGRPPKGVKTNWIMHEYRLAENP-KNLNHTKMRPKDSSMRLDDWVLCRIYRKSH-VS 177
           VFYKGRPPKG+KTNWIMHEYRLA+NP  N N+  ++ KDSSMRLDDWVLCRIY+KS+ +S
Sbjct: 123 VFYKGRPPKGMKTNWIMHEYRLADNPNSNFNNRPLKSKDSSMRLDDWVLCRIYKKSNALS 182

Query: 178 LPTSAGAA-SDHDLEEEEEKFNLHDTLLP-ILRSPPSHNTTLNPQKSSSFSNLLDAMDYS 235
             T+ GAA SD DLEEEE +  + D LLP  ++SPP+ N  L PQKS SFSN LDAMDYS
Sbjct: 183 STTAIGAATSDQDLEEEEAEQFIKDALLPAAIKSPPTTNALL-PQKSCSFSNPLDAMDYS 241

Query: 236 MLSNFLSENQTSHTGSESNPLFNSGILEQHHSSFNNGNGNGANTNTSCTNSFLIQKLPQL 295
           MLS+FL++NQ + +G +         L  +++  NN            ++S ++QKLPQL
Sbjct: 242 MLSSFLADNQCNGSGYDPTSFTFEQPLVNNYTIGNN------------SSSMMMQKLPQL 289

Query: 296 NYSVSNNMENQQHKRPHPNIDHHENMLHPSKKFITTCSFSSSTTDQFDPPYNYLHQPFLT 355
           + S+  NMEN+  KR + +ID      HPSKK  ++CS+S+S+T      Y +L+Q    
Sbjct: 290 SPSIP-NMENKL-KRQYSSIDED----HPSKKLNSSCSYSNSSTQSDMTHYTFLNQSLFN 343

Query: 356 QQLLLSPHLQFQG 368
           Q LLLSPH+QFQG
Sbjct: 344 QSLLLSPHIQFQG 356

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255568994|ref|XP_002525467.1| transcription factor, putative [Ricinus communis] gi|223535280|gb|EEF36957.1| transcription factor, putative [Ricinus communis]

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 245/376 (65%), Positives = 290/376 (77%), Gaps = 22/376 (5%)

Query: 4   IKNPESALPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFG 63
           +KNP+S LPPGFRFHPTDEELILHYLKKK+AS PFPVSIIADVDIYK DPWDLPAKAAFG
Sbjct: 1   MKNPQSNLPPGFRFHPTDEELILHYLKKKIASTPFPVSIIADVDIYKSDPWDLPAKAAFG 60

Query: 64  EKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSV---GAHQENIGVKKALV 120
           EKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDK+I+A++V   G  QENIGVKKALV
Sbjct: 61  EKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKVIVASTVAAGGVVQENIGVKKALV 120

Query: 121 FYKGRPPKGVKTNWIMHEYRLAENPKNLNHTKMRPKDSS--MRLDDWVLCRIYRKSH--V 176
           FYKGRPPKG+KTNWIMHEYRLA+ P   NH  +RPKDSS  MRLDDWVLCRIY+K+H   
Sbjct: 121 FYKGRPPKGIKTNWIMHEYRLADAP-TCNHKPVRPKDSSTTMRLDDWVLCRIYKKTHASP 179

Query: 177 SLPTSAGAASDHDLEEEEEKFN--LHDTLLPILRSPPSHNTTLNPQKSSSFSNLLDAMDY 234
               +A AASDHD EEEEE+    + + +LP L++P + N +L PQKSSSFSNLLDAMDY
Sbjct: 180 PSAVAAAAASDHDQEEEEEEEEQFVKENILPSLKTPIA-NKSLIPQKSSSFSNLLDAMDY 238

Query: 235 SMLSNFLSENQTSHTGSESNPLFNSGILEQHHSSFNNGNGNGANTNTSCTNSFLIQKLP- 293
           S+LS+FLS+NQ + TG +S P  N+  +       NN N     T  S  +S+L+QKLP 
Sbjct: 239 SILSSFLSDNQFNPTGYDSIPALNTTAISD-QPLLNNFNP----TTNSSGSSYLLQKLPH 293

Query: 294 QLNYS-VSNNMENQQHKRPHPNIDHHENMLHPSKKFITTCSFSSSTTDQFDPPYNYLHQP 352
           QLN + ++  MEN+  KRP   ID   +  +PSKK +++CSF++ST+ Q D   +Y +  
Sbjct: 294 QLNNAPLTPTMENKL-KRPLSIIDEDLHQ-YPSKKLVSSCSFTNSTS-QTDHMAHYQYN- 349

Query: 353 FLTQQLLLSPHLQFQG 368
           FL QQLLLSPHLQFQG
Sbjct: 350 FLNQQLLLSPHLQFQG 365

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351727585|ref|NP_001236142.1| transcriptional factor NAC11 [Glycine max] gi|184097798|gb|ACC66315.1| transcriptional factor NAC11 [Glycine max]

 Score =  419 bits (1078), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 230/372 (61%), Positives = 273/372 (73%), Gaps = 28/372 (7%)

Query: 4   IKNPESALPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFG 63
           + NPES LPPGFRFHPTDEELILHYL KKVAS+P PVSIIA+VDIYK DPWDLPAKA FG
Sbjct: 1   MGNPESNLPPGFRFHPTDEELILHYLSKKVASIPLPVSIIAEVDIYKLDPWDLPAKATFG 60

Query: 64  EKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYK 123
           EKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDK I+ +  G  QE++GVKKALVFYK
Sbjct: 61  EKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKTIVTSLQGGAQESVGVKKALVFYK 120

Query: 124 GRPPKGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIYRKSHVSLPTSAG 183
           GRPPKGVKTNWIMHEYRL +N K      ++ KDSSMRLDDWVLCRIY+KS   L ++  
Sbjct: 121 GRPPKGVKTNWIMHEYRLVDNNK-----PIKLKDSSMRLDDWVLCRIYKKSKHPLTSTEA 175

Query: 184 AASDHDLEEEEEKFNLHDTLLPILRSP-PSHNTTLNPQKSSSFSNLLDAMDYSMLSNFLS 242
           +    D+++ EE     +TLLPI +SP P    TL  QKS SFSNLLDAMDYS+LS+FLS
Sbjct: 176 SIGVGDVDQAEEHV-FKETLLPISKSPTPPPQNTLISQKSVSFSNLLDAMDYSILSSFLS 234

Query: 243 ENQTSH-TGSESNPLFNSGILEQHHSSFNNGNGNGANTNTSCTNSFLIQK-LPQLNYSVS 300
           EN T+H  G  S+  FN+G L+Q  S  +N NG            ++ QK  PQLN SVS
Sbjct: 235 ENHTTHPPGVGSSTGFNTGNLDQQPSPIDNSNG------------YMFQKNNPQLNPSVS 282

Query: 301 NNMENQQH-KRPHPNIDHHENMLHPSKKFI-TTCSFSSSTTDQFD-PPYNYL-HQPFLTQ 356
            NMEN    KR   N+D  E  L+PSKK++ ++C+F ++  +Q++ P +NYL  Q  L Q
Sbjct: 283 -NMENMMRPKRQVSNMD--EETLYPSKKYLSSSCNFPTNINNQYENPQWNYLMKQSLLNQ 339

Query: 357 QLLLSPHLQFQG 368
           +L+L PHLQFQG
Sbjct: 340 RLMLGPHLQFQG 351

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351723853|ref|NP_001238061.1| NAC domain protein [Glycine max] gi|187940281|gb|ACD39371.1| NAC domain protein [Glycine max]

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 226/371 (60%), Positives = 274/371 (73%), Gaps = 24/371 (6%)

Query: 4   IKNPESALPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFG 63
           + +PES LPPGFRFHPTDEELILHYL KKVAS+P  VSIIA+VDIYK DPWDLPAKA FG
Sbjct: 1   MGSPESNLPPGFRFHPTDEELILHYLSKKVASIPLTVSIIAEVDIYKLDPWDLPAKATFG 60

Query: 64  EKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYK 123
           EKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDK I+ +  G  QE+ GVKKALVFYK
Sbjct: 61  EKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKTIVTSLQGGAQESAGVKKALVFYK 120

Query: 124 GRPPKGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIYRKSHVSLPTSAG 183
           GRPPKGVKTNWIMHEYRL +N K      ++ KDSSMRLDDWVLCRIY+KS  +L ++  
Sbjct: 121 GRPPKGVKTNWIMHEYRLVDNNK-----PIKIKDSSMRLDDWVLCRIYKKSKHALTSTEA 175

Query: 184 AASDHDLEEEEEKFNLHDTLLPILRSP-PSHNTTLNPQKSSSFSNLLDAMDYSMLSNFLS 242
           +    ++++ EE     +TLLPI +SP P    TL  QKS SFSNLLDAMDYS+LS+FLS
Sbjct: 176 SIGVGEVDQAEEHL-FQETLLPISKSPAPPPQNTLISQKSVSFSNLLDAMDYSILSSFLS 234

Query: 243 ENQTSH-TGSESNPLFNSGILEQHHSSFNNGNGNGANTNTSCTNSFLIQKLPQLNYSVSN 301
           EN T+H  G  S+  FN+G L+Q  S            N + TN+++ QK PQLN SVS 
Sbjct: 235 ENHTNHPPGVGSSAGFNTGNLDQQCSPI---------NNNNPTNNYMFQKNPQLNPSVS- 284

Query: 302 NMENQQH-KRPHPNIDHHENMLHPSKKFI-TTCSFSSSTTDQFD-PPYNYL-HQPFLTQQ 357
           NMEN    KR   N+D  E  L+PSKK++ ++C+F ++ ++Q++ P +NYL  Q  + Q+
Sbjct: 285 NMENMMRPKRQVSNMD--EETLYPSKKYLSSSCNFPTNISNQYENPQWNYLMKQSLMNQR 342

Query: 358 LLLSPHLQFQG 368
           L+L PHLQFQG
Sbjct: 343 LMLGPHLQFQG 353

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559532|ref|XP_003548053.1| PREDICTED: NAC domain-containing protein 29-like [Glycine max]

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 216/377 (57%), Positives = 266/377 (70%), Gaps = 42/377 (11%)

Query: 11  LPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFGEKEWYFF 70
           LPPGFRFHPTDEELILHYL+KKVAS+P PV+IIA+VDIYKFDPW+LPAKAAFGEKEWYFF
Sbjct: 9   LPPGFRFHPTDEELILHYLRKKVASIPLPVAIIAEVDIYKFDPWELPAKAAFGEKEWYFF 68

Query: 71  SPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGV 130
           SPRDRKYPNGARPNRAAASGYWKATGTDK I+A+  G  +E+ GVKKALVFYKG+PPKGV
Sbjct: 69  SPRDRKYPNGARPNRAAASGYWKATGTDKNIVASLAGGVREHFGVKKALVFYKGKPPKGV 128

Query: 131 KTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIYRK-SHVSLPTSAGAAS--- 186
           KTNWIMHEYRL +      +  +R KD+SMRLDDWVLCRIY+K  H   PT+  A++   
Sbjct: 129 KTNWIMHEYRLVD-----TNRPIRIKDTSMRLDDWVLCRIYKKFKHAVSPTTEAASTLQV 183

Query: 187 -----DHDLEEEEEKFNLHDTLLPILRS-----PPSHNTTLNPQKSSSFSNLLDAMDYSM 236
                D  + EEEE+  + DTLLPIL++     PP   T L  QKS SFSNLLDA DYSM
Sbjct: 184 INEQLDQAVVEEEEQ--IKDTLLPILKNNNTFVPPPQATILMSQKSLSFSNLLDATDYSM 241

Query: 237 LSNFLSENQTSH--TGSESNPLFNSGILEQHHSSFNNGNGNGANTNTSCTNSFLIQKLPQ 294
           LS  LSEN +++  T SE++   N   L+Q  +     N    +TN+   NS+L QK P 
Sbjct: 242 LSTILSENHSNNYPTPSETSLFNNCENLDQEITP---QNYYINDTNSINNNSYLFQKNP- 297

Query: 295 LNYSVSNNMEN-QQHKRPHPNIDHHENM-LHPSKKF-ITTCSFSSSTTDQFDPPYNYLHQ 351
                 +NMEN  + KR  PN+DH +NM L+P KK+  ++C+F ++     +P +N    
Sbjct: 298 ------SNMENIARPKRHLPNMDHEDNMLLYPLKKYHSSSCNFPNTNLQNQNPQWN---- 347

Query: 352 PFLTQQLLLSP-HLQFQ 367
            F+ +Q L+SP +LQFQ
Sbjct: 348 -FMFKQPLMSPQYLQFQ 363

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357508607|ref|XP_003624592.1| NAC domain transcription factor [Medicago truncatula] gi|355499607|gb|AES80810.1| NAC domain transcription factor [Medicago truncatula]

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 210/370 (56%), Positives = 262/370 (70%), Gaps = 41/370 (11%)

Query: 7   PESALPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFGEKE 66
           P++ LPPGFRFHPTD ELILHYL+KK+AS+P PVSIIA+VDIYK DPWDLPAKA+FGEKE
Sbjct: 4   PQTNLPPGFRFHPTDAELILHYLRKKIASIPLPVSIIAEVDIYKLDPWDLPAKASFGEKE 63

Query: 67  WYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILAT---SVGAHQEN-IGVKKALVFY 122
           WYFFSPRDRKYPNGARPNRAAASGYWKATGTDK I+A+     G  QEN IGVKKALVFY
Sbjct: 64  WYFFSPRDRKYPNGARPNRAAASGYWKATGTDKTIVASLPCGGGRSQENIIGVKKALVFY 123

Query: 123 KGRPPKGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIYRKSHVSLPTSA 182
           KG+PPKG+KTNWIMHEYRL +N K      ++ KDSSMRLDDWVLCRIY+KS  +L ++ 
Sbjct: 124 KGKPPKGIKTNWIMHEYRLVDNNK-----PIKLKDSSMRLDDWVLCRIYKKSKCALTSTE 178

Query: 183 GAASDHDLEEEEEKFNLHDTLLPILR--SPPSHNTTLNPQKSSSFSNLLDAMDYSMLSNF 240
            + +     E  E+    +TL PI +  + P  NT ++ QKS SFSNLLDAMDYSMLS+F
Sbjct: 179 SSETMVGEVEHAEETQFQETLFPITKNTTSPLQNTLMS-QKSVSFSNLLDAMDYSMLSSF 237

Query: 241 LSENQTSHTGSESNPLFNSGILEQHHSSFNNGNGNGANTNTSCTNSFLIQKLPQLNYSVS 300
           LSEN  + +G  ++  FN+    Q  SS  N          +C N+++ QK PQ     S
Sbjct: 238 LSENSNNPSGIGTSSGFNTENFNQQQSSHIN----------TC-NNYMSQKNPQ-----S 281

Query: 301 NNMENQQHKRPHPNIDHHENMLHPSKKFI-TTCSFSSSTTDQFDPPYNYL-HQPFLTQQL 358
           N +++Q       N+D  E+ML+PSKK++ ++C+F  +   Q++   NYL  Q  + QQL
Sbjct: 282 NTLKHQLS-----NVD--EDMLYPSKKYLSSSCNF-PNINSQYE---NYLMKQSLMNQQL 330

Query: 359 LLSPHLQFQG 368
           LL PH Q+QG
Sbjct: 331 LLGPHHQYQG 340

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302399019|gb|ADL36804.1| NAC domain class transcription factor [Malus x domestica]

 Score =  376 bits (966), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 219/393 (55%), Positives = 257/393 (65%), Gaps = 50/393 (12%)

Query: 4   IKNPESALPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFG 63
           +KNPES LPPGFRFHPTDEELILHYL KKVAS P PVSIIA+VDIYKFDPW+LPAKAAFG
Sbjct: 1   MKNPESRLPPGFRFHPTDEELILHYLIKKVASTPLPVSIIAEVDIYKFDPWELPAKAAFG 60

Query: 64  EKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYK 123
           EKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDK I+A S G  ++N+GVKKALVFYK
Sbjct: 61  EKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKTIVAPSGG--RQNVGVKKALVFYK 118

Query: 124 GRPPKGVKTNWIMHEYRLAENPKNLN-----HTKMRPKDSSMRLDDWVLCRIYRKSHVSL 178
           GRPPKG+KTNWIMHEYRL E+P N       H  ++  D SMRLDDWVLCRIY+KS+V +
Sbjct: 119 GRPPKGIKTNWIMHEYRLPESPNNYTTTTNHHRAVKLNDLSMRLDDWVLCRIYKKSNV-V 177

Query: 179 PTSAGAASDHDLEEEEEKFNLHDTLLPILRSP-PS--HN-------TTLNPQKSSSFSNL 228
            ++A   +D D + + E+  LHD LLP  +SP PS  HN       ++L PQKS SFSNL
Sbjct: 178 TSAAALPNDQDQDVQGEEDFLHDILLPSFKSPFPSLDHNMMSTSTTSSLKPQKSCSFSNL 237

Query: 229 LDAMDYSMLSNFLSENQT---SHTGSESNPLFNSGILEQHHSSFNNGNGNGA------NT 279
           LDAMDYS+L++ L++ Q    + TG        S    +   S       G       NT
Sbjct: 238 LDAMDYSLLTSILADGQYYIPTGTG------LQSTTPNKFSYSCTGSTSTGLDPQPLFNT 291

Query: 280 NTSCTNSFLIQKLPQ---LNYSVSNNMENQQHKRPHPNIDHHENMLHPSKKFI-TTCSFS 335
           N S   S L Q LPQ   LN   S      + KR H   D    +L+PSKK + + CSF+
Sbjct: 292 NISSNRSHLFQTLPQYNCLNLPSSAPSTENRLKRQHSITDDRGMLLYPSKKDVNSNCSFT 351

Query: 336 SSTTDQFDPPYNYLHQPFLTQQLLLS-PHLQFQ 367
           ++               FL QQLLLS P   FQ
Sbjct: 352 NTANS------------FLNQQLLLSNPRFHFQ 372

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	368
TAIR|locus:2095908	359	NAC047 "NAC domain containing	0.687	0.704	0.619	5e-89
TAIR|locus:2011516	320	NAM "NO APICAL MERISTEM" [Arab	0.453	0.521	0.704	8.7e-69
TAIR|locus:2090186	364	NAC2 "NAC domain containing pr	0.486	0.491	0.677	1.3e-66
TAIR|locus:2008490	323	NAC025 "NAC domain containing	0.652	0.743	0.520	8.5e-65
TAIR|locus:2007166	268	NAP "NAC-like, activated by AP	0.671	0.921	0.522	3.3e-63
TAIR|locus:2198225	289	ATAF1 [Arabidopsis thaliana (t	0.619	0.788	0.504	8.4e-58
TAIR|locus:2124014	314	RD26 "RESPONSIVE TO DESICCATIO	0.277	0.324	0.663	3.8e-56
TAIR|locus:2204685	253	NAC032 "NAC domain containing	0.415	0.604	0.636	5.3e-56
TAIR|locus:2011531	317	NAC019 "NAC domain containing	0.407	0.473	0.652	4.8e-55
TAIR|locus:2090176	317	NAC3 "NAC domain containing pr	0.407	0.473	0.646	6.1e-55

TAIR|locus:2095908 NAC047 "NAC domain containing protein 47" [Arabidopsis thaliana (taxid:3702)]

 Score = 803 (287.7 bits), Expect = 5.0e-89, Sum P(2) = 5.0e-89
 Identities = 168/271 (61%), Positives = 193/271 (71%)

Query:     5 KNPESALPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFGE 64
             K+P S+LPPGFRFHPTDEELILHYL+KKV+S P P+SIIADVDIYK DPWDLPAKA FGE
Sbjct:     4 KDPRSSLPPGFRFHPTDEELILHYLRKKVSSSPVPLSIIADVDIYKSDPWDLPAKAPFGE 63

Query:    65 KEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKG 124
             KEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDK+I   +     ENIG+KKALVFY+G
Sbjct:    64 KEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKLIAVPNGEGFHENIGIKKALVFYRG 123

Query:   125 RPPKGVKTNWIMHEYRLAEN--PKNLNHTKM------------RPKDSSMRLDDWVLCRI 170
             +PPKGVKTNWIMHEYRLA++  PK +N ++               K+ SMRLDDWVLCRI
Sbjct:   124 KPPKGVKTNWIMHEYRLADSLSPKRINSSRSGGSEVNNNFGDRNSKEYSMRLDDWVLCRI 183

Query:   171 YRKSHVSLPTSAGAASDHDLEEEEEKFNLHDTLLPILRSPPSHNTTLNPQKSS-SFSNLL 229
             Y+KSH SL +S   A     +E EE  N              ++  L  QKSS SFSNLL
Sbjct:   184 YKKSHASL-SSPDVALVTSNQEHEENDNEPFVDRGTFLPNLQNDQPLKRQKSSCSFSNLL 242

Query:   230 DAMDYSMLSNFLSENQTSHTGSESNPLFNSG 260
             DA D + L+NFL  N+T    SES+  F  G
Sbjct:   243 DATDLTFLANFL--NETPENRSESDFSFMIG 271

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006865 "amino acid transport" evidence=RCA

GO:0010260 "organ senescence" evidence=RCA

TAIR|locus:2011516 NAM "NO APICAL MERISTEM" [Arabidopsis thaliana (taxid:3702)]

 Score = 677 (243.4 bits), Expect = 8.7e-69, Sum P(2) = 8.7e-69
 Identities = 119/169 (70%), Positives = 144/169 (85%)

Query:     7 PESALPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFGEKE 66
             P+  LPPGFRFHPTDEEL++HYLK+K  S+P PV+IIADVD+YKFDPW+LPAKA+FGE+E
Sbjct:    13 PQPNLPPGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLYKFDPWELPAKASFGEQE 72

Query:    67 WYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRP 126
             WYFFSPRDRKYPNGARPNRAA SGYWKATGTDK +++T  G   + +GVKKALVFY G+P
Sbjct:    73 WYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVISTG-GGGSKKVGVKKALVFYSGKP 131

Query:   127 PKGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIYRKSH 175
             PKGVK++WIMHEYRL +N K  +      K +S+RLDDWVLCRIY+K++
Sbjct:   132 PKGVKSDWIMHEYRLTDN-KPTHICDFGNKKNSLRLDDWVLCRIYKKNN 179

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

TAIR|locus:2090186 NAC2 "NAC domain containing protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
 Identities = 126/186 (67%), Positives = 149/186 (80%)

Query:     7 PESALPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFGEKE 66
             P+  LPPGFRFHPTDEEL++HYLK+K AS P PV+IIA+VD+YKFDPW+LPAKA+FGE+E
Sbjct:    13 PQPNLPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIAEVDLYKFDPWELPAKASFGEQE 72

Query:    67 WYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRP 126
             WYFFSPRDRKYPNGARPNRAA SGYWKATGTDK +LA+  G   + +GVKKALVFY G+P
Sbjct:    73 WYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLASD-G--NQKVGVKKALVFYSGKP 129

Query:   127 PKGVKTNWIMHEYRLAEN-PKNLNH-TKMRPKDSSMRLDDWVLCRIYRKSHVSLPTSAGA 184
             PKGVK++WIMHEYRL EN P N         K +S+RLDDWVLCRIY+K++ S       
Sbjct:   130 PKGVKSDWIMHEYRLIENKPNNRPPGCDFGNKKNSLRLDDWVLCRIYKKNNASRHVDND- 188

Query:   185 ASDHDL 190
               DHD+
Sbjct:   189 -KDHDM 193

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;NAS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

TAIR|locus:2008490 NAC025 "NAC domain containing protein 25" [Arabidopsis thaliana (taxid:3702)]

 Score = 660 (237.4 bits), Expect = 8.5e-65, P = 8.5e-65
 Identities = 140/269 (52%), Positives = 177/269 (65%)

Query:    11 LPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFGEKEWYFF 70
             LPPGFRFHPTDEEL++HYLKKK  S+P PVSIIA++D+YKFDPW+LP+KA+FGE EWYFF
Sbjct:    16 LPPGFRFHPTDEELVVHYLKKKADSVPLPVSIIAEIDLYKFDPWELPSKASFGEHEWYFF 75

Query:    71 SPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGV 130
             SPRDRKYPNG RPNRAA SGYWKATGTDK I   +  +H+  +GVKKALVFY G+PPKG+
Sbjct:    76 SPRDRKYPNGVRPNRAATSGYWKATGTDKPIFTCN--SHK--VGVKKALVFYGGKPPKGI 131

Query:   131 KTNWIMHEYRLAENPKNLNHTKMRPKD------SSMRLDDWVLCRIYRKSHVSLPTSAGA 184
             KT+WIMHEYRL +   NL+ T  +P D      +S+RLDDWVLCRIY+K+    PT    
Sbjct:   132 KTDWIMHEYRLTDG--NLS-TAAKPPDLTTTRKNSLRLDDWVLCRIYKKNSSQRPTMERV 188

Query:   185 ASDHDLEEEE-EKFNLHDTLLPILRSPPSHNTTLNPQK-------SSSFSNLL------- 229
                 DL E    K + + +   +L +  ++N   N +        SS   +L        
Sbjct:   189 LLREDLMEGMLSKSSANSSSTSVLDNNDNNNNN-NEEHFFDGMVVSSDKRSLCGQYRMGH 247

Query:   230 DAMDYSMLSNFLSENQTSHTGSESNPLFN 258
             +A   S   +FLS  +  HTG  +N  +N
Sbjct:   248 EASGSSSFGSFLSSKRFHHTGDLNNDNYN 276

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2007166 NAP "NAC-like, activated by AP3/PI" [Arabidopsis thaliana (taxid:3702)]

 Score = 645 (232.1 bits), Expect = 3.3e-63, P = 3.3e-63
 Identities = 140/268 (52%), Positives = 172/268 (64%)

Query:     8 ESALPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFGEKEW 67
             +S LPPGFRFHPTDEELI++YL+ +  S P PVSII +VDIYKFDPW LP K  FGE EW
Sbjct:     6 QSTLPPGFRFHPTDEELIVYYLRNQTMSKPCPVSIIPEVDIYKFDPWQLPEKTEFGENEW 65

Query:    68 YFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPP 127
             YFFSPR+RKYPNG RPNRAA SGYWKATGTDK I + S      N+GVKKALVFYKGRPP
Sbjct:    66 YFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGS-----SNVGVKKALVFYKGRPP 120

Query:   128 KGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIYRKSHVS-LPTSAGAAS 186
             KG+KT+WIMHEYRL ++ K    TK   ++ SMRLD+WVLCRIY+K   S L        
Sbjct:   121 KGIKTDWIMHEYRLHDSRKA--STK---RNGSMRLDEWVLCRIYKKRGASKLLNEQEGFM 175

Query:   187 DHDLEEEEEKFNLHDTLLPILRSPPSHNTTLNPQKSSSFSNLLDAMDY----SMLSNFLS 242
             D  L E+E K  +++             T++   ++ S ++LL+ MDY    S + NF  
Sbjct:   176 DEVLMEDETKVVVNEAERRT-EEEIMMMTSMKLPRTCSLAHLLE-MDYMGPVSHIDNFSQ 233

Query:   243 ENQTSHTGSESNPL----FNSGILEQHH 266
              +      SES+      FN   +  HH
Sbjct:   234 FDHLHQPDSESSWFGDLQFNQDEILNHH 261

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010150 "leaf senescence" evidence=IMP

GO:0009617 "response to bacterium" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=IMP

GO:0009908 "flower development" evidence=IMP

TAIR|locus:2198225 ATAF1 [Arabidopsis thaliana (taxid:3702)]

 Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
 Identities = 122/242 (50%), Positives = 153/242 (63%)

Query:    11 LPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFGEKEWYFF 70
             LPPGFRFHPTDEEL++HYL +K AS    V IIA++D+YK+DPW+LP  A +GEKEWYFF
Sbjct:     7 LPPGFRFHPTDEELVMHYLCRKCASQSIAVPIIAEIDLYKYDPWELPGLALYGEKEWYFF 66

Query:    71 SPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGV 130
             SPRDRKYPNG+RPNR+A SGYWKATG DK      +G  +  +G+KKALVFY G+ PKG 
Sbjct:    67 SPRDRKYPNGSRPNRSAGSGYWKATGADK-----PIGLPKP-VGIKKALVFYAGKAPKGE 120

Query:   131 KTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIYRKSHVSLPTSAGAASDHDL 190
             KTNWIMHEYRLA+  +++     R K +S+RLDDWVLCRIY K   +          +  
Sbjct:   121 KTNWIMHEYRLADVDRSV-----RKKKNSLRLDDWVLCRIYNKKGATERRGPPPPVVYGD 175

Query:   191 EEEEEKFNLHDTLLPILRSPPSHNTTLNPQKSSSFSNLLDAMDYSMLSNFLSENQTSHTG 250
             E  EEK  + + ++P    PP   +      +S     L   D S     +S   TS   
Sbjct:   176 EIMEEKPKVTEMVMP---PPPQQTSEFAYFDTSDSVPKLHTTDSSCSEQVVSPEFTSEVQ 232

Query:   251 SE 252
             SE
Sbjct:   233 SE 234

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009611 "response to wounding" evidence=IEP;RCA

GO:0009788 "negative regulation of abscisic acid mediated signaling pathway" evidence=IMP

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009620 "response to fungus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2124014 RD26 "RESPONSIVE TO DESICCATION 26" [Arabidopsis thaliana (taxid:3702)]

 Score = 400 (145.9 bits), Expect = 3.8e-56, Sum P(2) = 3.8e-56
 Identities = 77/116 (66%), Positives = 87/116 (75%)

Query:    59 KAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKA 118
             KA FGEKEWYFFSPRDRKYPNG+RPNR A SGYWKATGTDKII A         +G+KKA
Sbjct:    79 KALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITADG-----RRVGIKKA 133

Query:   119 LVFYKGRPPKGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIYRKS 174
             LVFY G+ PKG KTNWIMHEYRL E+ ++  H        S +LDDWVLCRIY+K+
Sbjct:   134 LVFYAGKAPKGTKTNWIMHEYRLIEHSRS--H-------GSSKLDDWVLCRIYKKT 180

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0009414 "response to water deprivation" evidence=RCA;IMP

GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2204685 NAC032 "NAC domain containing protein 32" [Arabidopsis thaliana (taxid:3702)]

 Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
 Identities = 105/165 (63%), Positives = 125/165 (75%)

Query:    12 PPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFGEKEWYFFS 71
             PPGFRFHPTDEEL+L YL +K AS P P  II ++D+Y++DPWDLP  A +GEKEWYFFS
Sbjct:    11 PPGFRFHPTDEELVLMYLCRKCASQPIPAPIITELDLYRYDPWDLPDMALYGEKEWYFFS 70

Query:    72 PRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGVK 131
             PRDRKYPNG+RPNRAA +GYWKATG DK I         + +G+KKALVFY G+PP G K
Sbjct:    71 PRDRKYPNGSRPNRAAGTGYWKATGADKPI------GRPKPVGIKKALVFYSGKPPNGEK 124

Query:   132 TNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIYRKSHV 176
             TNWIMHEYRLA+  +++       K +S+RLDDWVLCRIY K  V
Sbjct:   125 TNWIMHEYRLADVDRSVR------KKNSLRLDDWVLCRIYNKKGV 163

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

TAIR|locus:2011531 NAC019 "NAC domain containing protein 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
 Identities = 107/164 (65%), Positives = 126/164 (76%)

Query:    10 ALPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFGEKEWYF 69
             +LPPGFRF+PTDEEL++ YL +K A   F + +IA++D+YKFDPW LP KA FGEKEWYF
Sbjct:    13 SLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYF 72

Query:    70 FSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKG 129
             FSPRDRKYPNG+RPNR A SGYWKATGTDKII  ++ G   + +G+KKALVFY G+ PKG
Sbjct:    73 FSPRDRKYPNGSRPNRVAGSGYWKATGTDKII--STEG---QRVGIKKALVFYIGKAPKG 127

Query:   130 VKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIYRK 173
              KTNWIMHEYRL E P   N         S +LDDWVLCRIY+K
Sbjct:   128 TKTNWIMHEYRLIE-PSRRN--------GSTKLDDWVLCRIYKK 162

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009414 "response to water deprivation" evidence=RCA;IMP

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010286 "heat acclimation" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2090176 NAC3 "NAC domain containing protein 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
 Identities = 106/164 (64%), Positives = 126/164 (76%)

Query:    10 ALPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFGEKEWYF 69
             +LPPGFRF+PTDEEL++ YL +K A   F + +IA++D+YKFDPW LP+KA FGEKEWYF
Sbjct:    13 SLPPGFRFYPTDEELMVEYLCRKAAGHDFSLQLIAEIDLYKFDPWVLPSKALFGEKEWYF 72

Query:    70 FSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKG 129
             FSPRDRKYPNG+RPNR A SGYWKATGTDK+I  ++ G     +G+KKALVFY G+ PKG
Sbjct:    73 FSPRDRKYPNGSRPNRVAGSGYWKATGTDKVI--STEG---RRVGIKKALVFYIGKAPKG 127

Query:   130 VKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIYRK 173
              KTNWIMHEYRL E P   N         S +LDDWVLCRIY+K
Sbjct:   128 TKTNWIMHEYRLIE-PSRRN--------GSTKLDDWVLCRIYKK 162

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA;TAS

GO:0009414 "response to water deprivation" evidence=RCA;IMP

GO:0005515 "protein binding" evidence=IPI

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007154 "cell communication" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	anac047	anac047 (Arabidopsis NAC domain containing protein 47); transcription factor; Arabidopsis NAC domain containing protein 47 (anac047); FUNCTIONS IN- transcription factor activity; INVOLVED IN- multicellular organismal development, regulation of transcription; LOCATED IN- cellular_component unknown; EXPRESSED IN- 16 plant structures; EXPRESSED DURING- 7 growth stages; CONTAINS InterPro DOMAIN/s- No apical meristem (NAM) protein (InterPro-IPR003441); BEST Arabidopsis thaliana protein match is- NAM (NO APICAL MERISTEM); transcription factor (TAIR-AT1G52880.1); Has 1636 Blast hits to 1633 p [...] (359 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	Rap2.6L	Rap2.6L (related to AP2 6L); DNA binding / transcription factor; encodes a member of the ERF (e [...] (212 aa)				•					0.774
	AT4G15610	integral membrane family protein; integral membrane family protein; FUNCTIONS IN- molecular_fun [...] (193 aa)				•					0.760
	WRKY75	WRKY75; transcription factor; WRKY75 is one of several transcription factors induced during Pi [...] (145 aa)				•					0.663
	ATNAC6	ATNAC6 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 6); protein heterodimerization/ protein homod [...] (285 aa)				•			•	•	0.654
	SRG1	SRG1 (SENESCENCE-RELATED GENE 1); oxidoreductase, acting on diphenols and related substances as [...] (358 aa)				•					0.647
	AT1G73260	trypsin and protease inhibitor family protein / Kunitz family protein; trypsin and protease inh [...] (215 aa)				•					0.625
	MSS1	MSS1; carbohydrate transmembrane transporter/ hexose-hydrogen symporter/ high-affinity hydrogen [...] (526 aa)				•					0.603
	AT1G05340	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (72 aa)				•					0.601
	ATMYB102	ATMYB102 (ARABIDOPSIS MYB-LIKE 102); DNA binding / transcription factor; Encodes a MYB transcri [...] (350 aa)							•		0.599
	ATTI1	ATTI1; serine-type endopeptidase inhibitor; Member of the defensin-like (DEFL) family. Encodes [...] (89 aa)				•					0.573

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	368
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	4e-81

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  243 bits (622), Expect = 4e-81
 Identities = 89/134 (66%), Positives = 106/134 (79%), Gaps = 6/134 (4%)

Query: 11  LPPGFRFHPTDEELILHYLKKKVASMPFPV-SIIADVDIYKFDPWDLP-AKAAFGEKEWY 68
           LPPGFRFHPTDEEL+++YLK+KV   P P+  +I +VDIYKF+PWDLP  KA  G++EWY
Sbjct: 1   LPPGFRFHPTDEELVVYYLKRKVLGKPLPLLDVIPEVDIYKFEPWDLPDGKAKGGDREWY 60

Query: 69  FFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPK 128
           FFSPRDRKYPNG+R NRA  SGYWKATG DK +L+       E +G+KK LVFYKGR PK
Sbjct: 61  FFSPRDRKYPNGSRTNRATGSGYWKATGKDKPVLS----KGGEVVGMKKTLVFYKGRAPK 116

Query: 129 GVKTNWIMHEYRLA 142
           G KT+W+MHEYRL 
Sbjct: 117 GEKTDWVMHEYRLE 130

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	368
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=2.2e-44  Score=308.94  Aligned_cols=128  Identities=60%  Similarity=1.174  Sum_probs=97.5

Q ss_pred             CCCCceeCCCHHHHHHHHHHHhHhCCCCCc-ceeeeccCCCCCCCCccccccCCCceEEEeccCCCCCCCCCCCcccCCC
Q 017665           11 LPPGFRFHPTDEELILHYLKKKVASMPFPV-SIIADVDIYKFDPWDLPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAAS   89 (368)
Q Consensus        11 LPpGfRF~PTDEELI~~YL~~Ki~g~plp~-~iI~evDVY~~dPWdLP~k~~~ge~eWYFFspr~rKy~nG~R~nRatg~   89 (368)
                      |||||||+|||+|||.+||++|+.|.+++. .+|+++|||.+|||+|++....++.+||||+++.+++.+|.|++|++++
T Consensus         1 LP~G~rF~PtD~ELi~~yL~~k~~g~~~~~~~~i~~~Diy~~~P~~L~~~~~~~~~~~yFF~~~~~~~~~~~r~~R~~~~   80 (129)
T PF02365_consen    1 LPPGFRFRPTDEELINHYLRPKILGEPLPCEDVIHDVDIYSAHPWELPAKFKGGDEEWYFFSPRKKKYPNGGRPNRVTGG   80 (129)
T ss_dssp             --TTEEE---HHHHHHCTHHHHHTT-HHCS-CHSEE--GGGS-GGGCHHHSSS-SSEEEEEEE----------S-EEETT
T ss_pred             CCCceEecCChHHHHHHHHHHHhcCCCCCcccceeecccCccChHHhhhhccCCCceEEEEEecccccCCcccccccccc
Confidence            899999999999999999999999999988 7899999999999999965445678999999999999999999999999


Q ss_pred             CeEEeeccceeEEecccCCceeeEEEEEEEEEeeCCCCCCCccCeEEEEEEeC
Q 017665           90 GYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGVKTNWIMHEYRLA  142 (368)
Q Consensus        90 GyWKatG~dk~I~~~~~GG~g~~VG~KKtLvFY~Gr~pkG~KT~WvMhEYrL~  142 (368)
                      |+||++|+++.|...    ++++||+|++|+||.++.+++.+|+|+||||+|.
T Consensus        81 G~Wk~~g~~~~i~~~----~g~~iG~k~~l~f~~~~~~~~~kt~W~M~EY~L~  129 (129)
T PF02365_consen   81 GYWKSTGKEKPIKDP----GGKVIGFKKTLVFYSGKSPNGKKTGWVMHEYSLE  129 (129)
T ss_dssp             EEEEEECEEEEEEE-----TTCEEEEEEEEEEEESSTTS-EEEEEEEEEEEE-
T ss_pred             eEEeecccccccccc----cceeeeeEEEEEEEeccCCCCCcCCeEEEEEEeC
Confidence            999999999999985    3689999999999999888999999999999984

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	368
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		1e-59
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		1e-59
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		9e-57

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score =  227 bits (578), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 104/164 (63%), Positives = 124/164 (75%), Gaps = 14/164 (8%)
Query: 10  ALPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFGEKEWYF 69
           +LPPGFRF+PTDEEL++ YL +K A   F + +IA++D+YKFDPW LP KA FGEKEWYF
Sbjct: 16  SLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYF 75
Query: 70  FSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKG 129
           FSPRDRKYPNG+RPNR A SGYWKATGTDKII         + +G+KKALVFY G+ PKG
Sbjct: 76  FSPRDRKYPNGSRPNRVAGSGYWKATGTDKII-----STEGQRVGIKKALVFYIGKAPKG 130
Query: 130 VKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIYRK 173
            KTNWIMHEYRL E  +         ++ S +LDDWVLCRIY+K
Sbjct: 131 TKTNWIMHEYRLIEPSR---------RNGSTKLDDWVLCRIYKK 165

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score =  226 bits (577), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 104/164 (63%), Positives = 124/164 (75%), Gaps = 14/164 (8%)
Query: 10  ALPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFGEKEWYF 69
           +LPPGFRF+PTDEEL++ YL +K A   F + +IA++D+YKFDPW LP KA FGEKEWYF
Sbjct: 19  SLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYF 78
Query: 70  FSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKG 129
           FSPRDRKYPNG+RPNR A SGYWKATGTDKII         + +G+KKALVFY G+ PKG
Sbjct: 79  FSPRDRKYPNGSRPNRVAGSGYWKATGTDKII-----STEGQRVGIKKALVFYIGKAPKG 133
Query: 130 VKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIYRK 173
            KTNWIMHEYRL E  +         ++ S +LDDWVLCRIY+K
Sbjct: 134 TKTNWIMHEYRLIEPSR---------RNGSTKLDDWVLCRIYKK 168

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score =  217 bits (552), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 104/168 (61%), Positives = 124/168 (73%), Gaps = 9/168 (5%)
Query: 8   ESALPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFGEKEW 67
           E  LPPGFRFHPTD+EL+ HYL +K A    PV IIA+VD+YKFDPWDLP +A FG +EW
Sbjct: 12  ELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGAREW 71
Query: 68  YFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPP 127
           YFF+PRDRKYPNG+RPNRAA +GYWKATG DK      V      +G+KKALVFY G+ P
Sbjct: 72  YFFTPRDRKYPNGSRPNRAAGNGYWKATGADK-----PVAPRGRTLGIKKALVFYAGKAP 126
Query: 128 KGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIYRKSH 175
           +GVKT+WIMHEYRLA+  +     K      S+RLDDWVLCR+Y K +
Sbjct: 127 RGVKTDWIMHEYRLADAGRAAAGAKK----GSLRLDDWVLCRLYNKKN 170
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	368
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	1e-107
1ut7_A	171	No apical meristem protein; transcription regulati	1e-106
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-07

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score =  311 bits (799), Expect = e-107
 Identities = 103/169 (60%), Positives = 123/169 (72%), Gaps = 9/169 (5%)

Query: 6   NPESALPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFGEK 65
             E  LPPGFRFHPTD+EL+ HYL +K A    PV IIA+VD+YKFDPWDLP +A FG +
Sbjct: 10  EAELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGAR 69

Query: 66  EWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGR 125
           EWYFF+PRDRKYPNG+RPNRAA +GYWKATG DK +           +G+KKALVFY G+
Sbjct: 70  EWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRG-----RTLGIKKALVFYAGK 124

Query: 126 PPKGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIYRKS 174
            P+GVKT+WIMHEYRLA+  +         K  S+RLDDWVLCR+Y K 
Sbjct: 125 APRGVKTDWIMHEYRLADAGRAAAG----AKKGSLRLDDWVLCRLYNKK 169

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  309 bits (793), Expect = e-106
 Identities = 104/169 (61%), Positives = 125/169 (73%), Gaps = 14/169 (8%)

Query: 6   NPESALPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFGEK 65
             + +LPPGFRF+PTDEEL++ YL +K A   F + +IA++D+YKFDPW LP KA FGEK
Sbjct: 12  LTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEK 71

Query: 66  EWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGR 125
           EWYFFSPRDRKYPNG+RPNR A SGYWKATGTDKII         + +G+KKALVFY G+
Sbjct: 72  EWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEG-----QRVGIKKALVFYIGK 126

Query: 126 PPKGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIYRKS 174
            PKG KTNWIMHEYRL E  +         ++ S +LDDWVLCRIY+K 
Sbjct: 127 APKGTKTNWIMHEYRLIEPSR---------RNGSTKLDDWVLCRIYKKQ 166

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 52.9 bits (126), Expect = 1e-07
 Identities = 64/385 (16%), Positives = 111/385 (28%), Gaps = 144/385 (37%)

Query: 17  FHPTD-EELILHYLKKKVASM--------PFPVSIIADVDIYKFDPWDLPAKAAFGEKEW 67
             P + + L+L YL  +   +        P  +SIIA+        WD            
Sbjct: 298 LTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWD------------ 345

Query: 68  YFFSPRDRKYPNGARPNRAAASGYWKATGTDKI--ILATSVGAHQENIGVKKAL----VF 121
                                   WK    DK+  I+ +S+    E    +K      VF
Sbjct: 346 -----------------------NWKHVNCDKLTTIIESSL-NVLEPAEYRKMFDRLSVF 381

Query: 122 YKGRPPKGVK-------TNWIMHEYRLAENPKNLNHTK----MRPKDSSMRLDDWVLCRI 170
                P             W            N  H       +PK+S++ +       I
Sbjct: 382 -----PPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPS-----I 431

Query: 171 YRKSHVSLPTSAGAASDHDLEEEEEKFNLHDTLL---PILRSPPSHNTTLNPQKSSSFSN 227
           Y +  V L               E ++ LH +++    I ++  S +             
Sbjct: 432 YLELKVKL---------------ENEYALHRSIVDHYNIPKTFDSDDLIPPY-------- 468

Query: 228 LLDAMDYSMLSNFLSENQTSHTGSESNPLF-NSGILEQ---HHSSFNNGNGNGANTNTSC 283
            LD   YS + + L   +     +    +F +   LEQ   H S+  N +G+  NT    
Sbjct: 469 -LDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNT---- 523

Query: 284 TNSFLIQKLPQL-NYSVSNNMENQQHKRPH--PNIDHHENMLHPSKKFITTCSFSSSTTD 340
                   L QL  Y            +P+   N   +E +++    F+           
Sbjct: 524 --------LQQLKFY------------KPYICDNDPKYERLVNAILDFLPKIE------- 556

Query: 341 QFDPPYNYLHQPF--LTQQLLLSPH 363
                 N +   +  L +  L++  
Sbjct: 557 -----ENLICSKYTDLLRIALMAED 576

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	368
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=1.5e-58  Score=418.11  Aligned_cols=160  Identities=64%  Similarity=1.248  Sum_probs=135.7

Q ss_pred             CCCCCCCceeCCCHHHHHHHHHHHhHhCCCCCcceeeeccCCCCCCCCccccccCCCceEEEeccCCCCCCCCCCCcccC
Q 017665            8 ESALPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFGEKEWYFFSPRDRKYPNGARPNRAA   87 (368)
Q Consensus         8 ~~~LPpGfRF~PTDEELI~~YL~~Ki~g~plp~~iI~evDVY~~dPWdLP~k~~~ge~eWYFFspr~rKy~nG~R~nRat   87 (368)
                      ++.|||||||||||||||.|||++|+.|.+++..+|++||||++|||+||+.+..|+++|||||+|++||++|.|++|+|
T Consensus        12 ~~~LPpGfRF~PTDeELV~~YL~~K~~g~~~~~~~I~evDvy~~~Pw~Lp~~~~~g~~ewYFFs~r~~ky~~g~R~nR~t   91 (174)
T 3ulx_A           12 ELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGAREWYFFTPRDRKYPNGSRPNRAA   91 (174)
T ss_dssp             TTTCCTTCCCCCCHHHHHHHTHHHHHHTCCCSSSCCEECCGGGSCGGGSGGGCSSCSSEEEEEEECCC-----CCSCEEE
T ss_pred             ccCCCCcceeCCCHHHHHHHHHHHHhcCCCCCcCeeeecccccCCchhhhhhhccCCceEEEEeccccccCCCCCceeec
Confidence            45899999999999999999999999999999999999999999999999999889999999999999999999999999


Q ss_pred             CCCeEEeeccceeEEecccCCceeeEEEEEEEEEeeCCCCCCCccCeEEEEEEeCCCCCCcCCCCCCCCCCccCCCceEE
Q 017665           88 ASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVL  167 (368)
Q Consensus        88 g~GyWKatG~dk~I~~~~~GG~g~~VG~KKtLvFY~Gr~pkG~KT~WvMhEYrL~~~~~~~~~~~~~~~~~~~~~dd~VL  167 (368)
                      ++||||+||+++.|...     +.+||+||+|+||.|++|+|.||+|+||||+|........    ......+++++|||
T Consensus        92 ~~G~WkatG~dk~I~~~-----g~~vG~KktLvFy~g~~p~g~kT~WvMhEY~L~~~~~~~~----~~~~~~~~~~~wVl  162 (174)
T 3ulx_A           92 GNGYWKATGADKPVAPR-----GRTLGIKKALVFYAGKAPRGVKTDWIMHEYRLADAGRAAA----GAKKGSLRLDDWVL  162 (174)
T ss_dssp             TTEEEEECSCCEEECCS-----SSCCEEEEEEEEEESSTTSCEEEEEEEEEEEECSCC---------------CCSSEEE
T ss_pred             CCceEccCCCCcEEeeC-----CcEEEEEEEEEEecCCCCCCCcCCeEEEEEEeCCCCCccc----ccccCCCCCCCEEE
Confidence            99999999999999763     5899999999999999999999999999999998632110    01122356789999


Q ss_pred             EEEEEcCCC
Q 017665          168 CRIYRKSHV  176 (368)
Q Consensus       168 CRIykK~~~  176 (368)
                      ||||+|++.
T Consensus       163 Crvf~K~~~  171 (174)
T 3ulx_A          163 CRLYNKKNE  171 (174)
T ss_dssp             EEEEESCC-
T ss_pred             EEEEEcCCC
Confidence            999999763

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=6.4e-58  Score=412.85  Aligned_cols=155  Identities=67%  Similarity=1.269  Sum_probs=131.8

Q ss_pred             CCCCCCCceeCCCHHHHHHHHHHHhHhCCCCCcceeeeccCCCCCCCCccccccCCCceEEEeccCCCCCCCCCCCcccC
Q 017665            8 ESALPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFGEKEWYFFSPRDRKYPNGARPNRAA   87 (368)
Q Consensus         8 ~~~LPpGfRF~PTDEELI~~YL~~Ki~g~plp~~iI~evDVY~~dPWdLP~k~~~ge~eWYFFspr~rKy~nG~R~nRat   87 (368)
                      +..|||||||||||||||.|||++|+.|.+++..+|++||||++|||+||+++..|+++||||++|++||++|.|++|+|
T Consensus        14 ~~~lPpGfRF~PTDeELv~~YL~~K~~g~~~~~~~I~e~Diy~~~Pw~Lp~~~~~g~~ewyFFs~r~~k~~~g~R~~R~t   93 (171)
T 1ut7_A           14 QLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRVA   93 (171)
T ss_dssp             SSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSSSCSSEEEEEEECCC-------CCEEE
T ss_pred             ccCCCCcceeCCChHHHHHHHHHHHhcCCCCCCCeEeecccccCChhHhhchhhcCCccEEEEeccccccCCCCcccccC
Confidence            46899999999999999999999999999999999999999999999999999889999999999999999999999999


Q ss_pred             CCCeEEeeccceeEEecccCCceeeEEEEEEEEEeeCCCCCCCccCeEEEEEEeCCCCCCcCCCCCCCCCCccCCCceEE
Q 017665           88 ASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVL  167 (368)
Q Consensus        88 g~GyWKatG~dk~I~~~~~GG~g~~VG~KKtLvFY~Gr~pkG~KT~WvMhEYrL~~~~~~~~~~~~~~~~~~~~~dd~VL  167 (368)
                      ++||||+||+++.|...     +.+||+||+|+||+|++|+|.||+|+||||+|.....         .......++|||
T Consensus        94 ~~G~Wk~tG~~k~I~~~-----~~~vG~KktLvFy~g~~p~g~kT~WvMhEY~l~~~~~---------~~~~~~~~~~Vl  159 (171)
T 1ut7_A           94 GSGYWKATGTDKIISTE-----GQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSR---------RNGSTKLDDWVL  159 (171)
T ss_dssp             TTEEEEEEEEEEEEEET-----TEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC-----------------CCEEE
T ss_pred             CCCEEeccCCCceEEec-----CcEEEEEEEEEEEcCcCCCCCcCCeEEEEEEcCCCcc---------ccCcccCCCEEE
Confidence            99999999999999874     4899999999999999999999999999999998621         112245689999


Q ss_pred             EEEEEcCCC
Q 017665          168 CRIYRKSHV  176 (368)
Q Consensus       168 CRIykK~~~  176 (368)
                      ||||+|+..
T Consensus       160 Crv~~k~~~  168 (171)
T 1ut7_A          160 CRIYKKQSS  168 (171)
T ss_dssp             EEEEECC--
T ss_pred             EEEEEcCCC
Confidence            999999864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	368
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	1e-74

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  226 bits (578), Expect = 1e-74
 Identities = 104/167 (62%), Positives = 124/167 (74%), Gaps = 14/167 (8%)

Query: 7   PESALPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFGEKE 66
            + +LPPGFRF+PTDEEL++ YL +K A   F + +IA++D+YKFDPW LP KA FGEKE
Sbjct: 13  TQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKE 72

Query: 67  WYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRP 126
           WYFFSPRDRKYPNG+RPNR A SGYWKATGTDKII         + +G+KKALVFY G+ 
Sbjct: 73  WYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEG-----QRVGIKKALVFYIGKA 127

Query: 127 PKGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWVLCRIYRK 173
           PKG KTNWIMHEYRL E  +          + S +LDDWVLCRIY+K
Sbjct: 128 PKGTKTNWIMHEYRLIEPSRR---------NGSTKLDDWVLCRIYKK 165

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	368
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1e-54  Score=386.63  Aligned_cols=154  Identities=68%  Similarity=1.275  Sum_probs=130.8

Q ss_pred             CCCCCCCCceeCCCHHHHHHHHHHHhHhCCCCCcceeeeccCCCCCCCCccccccCCCceEEEeccCCCCCCCCCCCccc
Q 017665            7 PESALPPGFRFHPTDEELILHYLKKKVASMPFPVSIIADVDIYKFDPWDLPAKAAFGEKEWYFFSPRDRKYPNGARPNRA   86 (368)
Q Consensus         7 p~~~LPpGfRF~PTDEELI~~YL~~Ki~g~plp~~iI~evDVY~~dPWdLP~k~~~ge~eWYFFspr~rKy~nG~R~nRa   86 (368)
                      .+++|||||||+|||||||.|||++|+.|.+++..+|++||||++|||+||+....++++||||+++.+++++|.|++|+
T Consensus        13 ~~l~LPpG~RF~PTDeELv~~YL~~Ki~g~~l~~~~I~~~Dvy~~~Pw~Lp~~~~~~~~~wyFft~~~~k~~~g~r~~R~   92 (166)
T d1ut7a_          13 TQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRV   92 (166)
T ss_dssp             CSSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSSSCSSEEEEEEECCC-------CCEE
T ss_pred             ccccCCCccccCCCcHHHHHHHHHHHHcCCCCCcccceeccCCcCChhhccchhccCcceEEEEeeeccccCCCCccccc
Confidence            35789999999999999999999999999999999999999999999999999888899999999999999999999999


Q ss_pred             CCCCeEEeeccceeEEecccCCceeeEEEEEEEEEeeCCCCCCCccCeEEEEEEeCCCCCCcCCCCCCCCCCccCCCceE
Q 017665           87 AASGYWKATGTDKIILATSVGAHQENIGVKKALVFYKGRPPKGVKTNWIMHEYRLAENPKNLNHTKMRPKDSSMRLDDWV  166 (368)
Q Consensus        87 tg~GyWKatG~dk~I~~~~~GG~g~~VG~KKtLvFY~Gr~pkG~KT~WvMhEYrL~~~~~~~~~~~~~~~~~~~~~dd~V  166 (368)
                      |++||||++|+++.|...     +.+||+||+|+||+++.+++.+|+|+||||+|.+....         ....+.++||
T Consensus        93 ~g~G~Wk~~g~~~~i~~~-----g~~vG~kk~l~fy~~~~~~~~~t~W~M~EY~l~~~~~~---------~~~~~~~~~V  158 (166)
T d1ut7a_          93 AGSGYWKATGTDKIISTE-----GQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRR---------NGSTKLDDWV  158 (166)
T ss_dssp             ETTEEEEEEEEEEEEEET-----TEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC-----------------CCEE
T ss_pred             cCCCEecccCCCceEecC-----CcEEEEEEEEEEEecCCCCCCccCeEEEEEecCCcccc---------cCccccCCEE
Confidence            999999999999998763     58899999999999999999999999999999876321         1234568999


Q ss_pred             EEEEEEcC
Q 017665          167 LCRIYRKS  174 (368)
Q Consensus       167 LCRIykK~  174 (368)
                      |||||+|+
T Consensus       159 LCrI~~Kk  166 (166)
T d1ut7a_         159 LCRIYKKQ  166 (166)
T ss_dssp             EEEEEECC
T ss_pred             EEEEEecC
Confidence            99999984