Citrus Sinensis ID: 017702
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 367 | 2.2.26 [Sep-21-2011] | |||||||
| Q9FKR0 | 361 | Probable S-adenosylmethio | yes | no | 0.959 | 0.975 | 0.447 | 1e-84 | |
| Q9FKC8 | 362 | Probable S-adenosylmethio | no | no | 0.959 | 0.972 | 0.448 | 2e-83 | |
| Q9FKD0 | 362 | Probable S-adenosylmethio | no | no | 0.959 | 0.972 | 0.440 | 9e-82 | |
| Q9LS10 | 359 | Probable S-adenosylmethio | no | no | 0.950 | 0.972 | 0.454 | 2e-80 | |
| Q9FZN8 | 369 | Caffeine synthase 1 OS=Ca | N/A | no | 0.937 | 0.932 | 0.331 | 9e-52 | |
| Q68CM3 | 365 | Probable caffeine synthas | N/A | no | 0.904 | 0.909 | 0.334 | 1e-51 | |
| Q9FYZ9 | 364 | Benzoate carboxyl methylt | N/A | no | 0.863 | 0.870 | 0.355 | 4e-51 | |
| Q9AVK0 | 372 | 7-methylxanthosine syntha | N/A | no | 0.869 | 0.857 | 0.357 | 2e-50 | |
| A4GE69 | 372 | 7-methylxanthosine syntha | N/A | no | 0.869 | 0.857 | 0.357 | 2e-50 | |
| Q9SPV4 | 359 | Salicylate O-methyltransf | N/A | no | 0.891 | 0.910 | 0.352 | 3e-49 |
| >sp|Q9FKR0|MT878_ARATH Probable S-adenosylmethionine-dependent methyltransferase At5g38780 OS=Arabidopsis thaliana GN=At5g38780 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 313 bits (802), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 161/360 (44%), Positives = 225/360 (62%), Gaps = 8/360 (2%)
Query: 10 TEAYPMVGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIADL 69
+++YPM GGDD +SY +NS+YQ+ +D +E + I + LDL L + L F IAD
Sbjct: 5 SQSYPMSGGDDQHSYIHNSSYQKAGIDGVQEKARQYILENLDL--LNMNPNLSTFTIADF 62
Query: 70 GCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHA 129
GCS+GPNT AVQNII+ ++LK + + + + LEFQV+ ND +NDFNTLF++ P +
Sbjct: 63 GCSIGPNTFHAVQNIIDIVKLKHLKESQEDSRVAPLEFQVYFNDLPNNDFNTLFRTQPPS 122
Query: 130 RK--YFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSE 187
K YF+ G+PGSF+ R+ PR+SIH +TS+ HWLSKVP+E+ D S AWNK I C+
Sbjct: 123 SKQEYFSVGVPGSFYGRVLPRNSIHIGNTSFTTHWLSKVPEEVCDKNSLAWNKNYIHCNN 182
Query: 188 SNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNIL 247
EV AY Q++ DM FL ARAEELVPGGLM+ L +PDG+ + ++ G+ + +
Sbjct: 183 LIEEVTEAYKVQFEKDMGVFLKARAEELVPGGLMI-TLGQCLPDGVAMYETWSGIVKDTI 241
Query: 248 GSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLSQPRR--RI 305
G C D+A +GV +EEK++ FNLP Y EL+ I N FTIE ME +S P ++
Sbjct: 242 GDCLQDMATLGVTTEEKIEMFNLPVYFPQVSELKGAIEQNIRFTIEMMEIVSHPLEAVQL 301
Query: 306 TANEYASGIRAGIDGLIKKHFGDEFVDEIFNYFTTKVEENYSIIEEKIRNVSNLFISLKR 365
+ N S RA + +I++HFG VDE+F F K+ E + I EK + I LKR
Sbjct: 302 SNNFITSMYRAILSTVIERHFGGSVVDELFRQFAKKLSE-HPIDFEKCKKQMVYHIVLKR 360
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 1EC: .EC: 1EC: .EC: - |
| >sp|Q9FKC8|MT799_ARATH Probable S-adenosylmethionine-dependent methyltransferase At5g37990 OS=Arabidopsis thaliana GN=At5g37990 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 309 bits (791), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 161/359 (44%), Positives = 230/359 (64%), Gaps = 7/359 (1%)
Query: 11 EAYPMVGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIADLG 70
+++PM GGD +SY +NS+YQ+ +D AKE SEAI LDL++L + +IAD G
Sbjct: 6 QSFPMNGGDGPHSYIHNSSYQKVAIDGAKEKTSEAILKNLDLELLNRNSDENILRIADFG 65
Query: 71 CSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHAR 130
CS+GPNT VQNII+ ++ K + N + + LEFQV ND +NDFNTLF++ P +
Sbjct: 66 CSIGPNTFEVVQNIIDTVKQKNLKENNAYIG-APLEFQVCFNDQPNNDFNTLFRTQPISS 124
Query: 131 K--YFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSES 188
K Y + G+PGSFH R+ P++S+H H +YALHWLS VP+ + D SPA NK IQC+
Sbjct: 125 KQAYLSVGVPGSFHGRVLPKNSLHIGHITYALHWLSTVPQHVCDKKSPALNKSYIQCNNL 184
Query: 189 NIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILG 248
EV AY Q+K DM FL ARAEELV GGLM+L +PDG+P + ++ GV +++G
Sbjct: 185 VEEVTEAYRVQFKKDMGDFLGARAEELVSGGLMIL-SGQCLPDGVPKALTWQGVVIDMIG 243
Query: 249 SCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLSQPR--RRIT 306
C D+AK G+ ++EK++ F+LP Y E +A I N NF+IE MEK+S P + +T
Sbjct: 244 DCLMDMAKQGITTKEKIELFSLPIYIPHISEFKAEIERNENFSIETMEKISHPMDYKPLT 303
Query: 307 ANEYASGIRAGIDGLIKKHFGDEFVDEIFNYFTTKVEENYSIIEEKIRNVSNLFISLKR 365
+ S RA ++ +I++HFGD V+E+F+ F K+ + Y I ++ + N FI LKR
Sbjct: 304 NDFITSMFRAILNTIIEEHFGDGVVNELFDRFAKKLNK-YPIDFKRCKKYVNYFIVLKR 361
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q9FKD0|MT797_ARATH Probable S-adenosylmethionine-dependent methyltransferase At5g37970 OS=Arabidopsis thaliana GN=At5g37970 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 304 bits (778), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 158/359 (44%), Positives = 229/359 (63%), Gaps = 7/359 (1%)
Query: 11 EAYPMVGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIADLG 70
+++PM GGD +SY +NS+YQ+ +D KE SEAI +KLDL+ L + +I D G
Sbjct: 6 QSFPMNGGDGPHSYIHNSSYQKVAIDGVKERTSEAILEKLDLEFLNRNSEENILRIVDFG 65
Query: 71 CSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP--H 128
CS+GPNT VQNII+ ++ K + N + LEFQV ND +NDFNTLF++ P
Sbjct: 66 CSIGPNTFDVVQNIIDTVKQK-RLKENKTYIGAPLEFQVCFNDQPNNDFNTLFRTQPFFS 124
Query: 129 ARKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSES 188
++YF+ G+PGSFH R+ P++S+H HTSY LHWLS VP+ + D SPA NK IQC+
Sbjct: 125 RKEYFSVGVPGSFHGRVLPKNSLHIGHTSYTLHWLSNVPQHVCDKKSPALNKSYIQCNNL 184
Query: 189 NIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILG 248
EV +AY Q++ D FL ARAEELV GGLM+L +PDGIP + ++ GV +++G
Sbjct: 185 VDEVTKAYKIQFRKDFGGFLEARAEELVSGGLMIL-SGQCLPDGIPKALTWQGVVIDMIG 243
Query: 249 SCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLSQPR--RRIT 306
C DLAK+G+ S+EK++ F+LPTY E +A I N NF +E ME++S P +T
Sbjct: 244 DCLMDLAKLGITSKEKIELFSLPTYIPHISEFKANIEQNENFNVETMEEISHPMDYMPLT 303
Query: 307 ANEYASGIRAGIDGLIKKHFGDEFVDEIFNYFTTKVEENYSIIEEKIRNVSNLFISLKR 365
+ S RA ++ +I++HFG+ V+E+F+ ++++ Y I ++ + N FI LKR
Sbjct: 304 NDFITSMFRAILNTIIEEHFGEGVVNELFSRLAKRLDK-YPIDFKRCKKYVNYFIVLKR 361
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q9LS10|MT810_ARATH Probable S-adenosylmethionine-dependent methyltransferase At5g38100 OS=Arabidopsis thaliana GN=At5g38100 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 300 bits (767), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 164/361 (45%), Positives = 219/361 (60%), Gaps = 12/361 (3%)
Query: 10 TEAYPMVGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIADL 69
+ YPM G D +SY +NS+YQ+ + +A E I +KLDL++ F+IAD
Sbjct: 5 SHMYPMSSGHDQHSYIHNSSYQKAAISSAVEKTRRCIFEKLDLQL---SSDFGTFRIADF 61
Query: 70 GCSVGPNTLLAVQNIIEAIELK-FQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH 128
GCS+GPNT Q+II+ ++ K + +T P LEFQVF ND NDFNTLF++ P
Sbjct: 62 GCSIGPNTFHVAQSIIDTVKSKRLEESTENSLVP--LEFQVFFNDQPTNDFNTLFRTQPL 119
Query: 129 A--RKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCS 186
+ R+YF+ G+PGSF+ R+ PR+SIH HTSY HWLSKVP + D S AWNK IQC+
Sbjct: 120 SPEREYFSVGVPGSFYGRVLPRNSIHIGHTSYTTHWLSKVPDNVCDKKSMAWNKNYIQCN 179
Query: 187 ESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNI 246
EV +AY Q+ DME FL+ARAEELVPGGLM++I +PDG+ L ++ G +
Sbjct: 180 NLLEEVTKAYKVQFIKDMEIFLDARAEELVPGGLMIVI-GECLPDGVSLYETWQGYVMDT 238
Query: 247 LGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLSQPR--RR 304
+G C D+AK G+ SEEK+D F+LP Y EL+ I NG+FTIE ME S P +
Sbjct: 239 IGDCLMDMAKSGITSEEKIDLFSLPVYFPQFSELKGEIEKNGSFTIELMETTSHPLEGKP 298
Query: 305 ITANEYASGIRAGIDGLIKKHFGDEFVDEIFNYFTTKVEENYSIIEEKIRNVSNLFISLK 364
+T + S RA + +I+KHFGD VDE+F Y K N+ I E + I LK
Sbjct: 299 LTNDFITSTFRAFLTTIIEKHFGDGVVDELF-YRLAKKLSNHPIDFEMRKKQVVYCIVLK 357
Query: 365 R 365
R
Sbjct: 358 R 358
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q9FZN8|TCS1_CAMSI Caffeine synthase 1 OS=Camellia sinensis GN=TCS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 204 bits (519), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 125/377 (33%), Positives = 201/377 (53%), Gaps = 33/377 (8%)
Query: 6 SNNLTEAYPMVGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFK 65
+ + E M G+ SYA NS++ + V A+ + A+ + D L+
Sbjct: 6 AGKVNEVLFMNRGEGESSYAQNSSFTQQVASMAQPALENAVE-----TLFSRDFHLQALN 60
Query: 66 IADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKS 125
ADLGC+ GPNT + I +E K R N LE QV+LND NDFNTLFK
Sbjct: 61 AADLGCAAGPNTFAVISTIKRMMEKKC-RELNCQ----TLELQVYLNDLFGNDFNTLFKG 115
Query: 126 LP--------HARKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPA 177
L + G+PGSFH RLFPR+S+H VH+SY++HWL++ PK + A
Sbjct: 116 LSSEVIGNKCEEVPCYVMGVPGSFHGRLFPRNSLHLVHSSYSVHWLTQAPKGLTSREGLA 175
Query: 178 WNKGSIQCSESNIEVVR-AYSTQYKNDMESFLNARAEELVPGGLMVLIL-AAVVPDGIPL 235
NKG I S+++ VVR AY +Q+ D FLNAR++E+VP G MVLIL D +
Sbjct: 176 LNKGKIYISKTSPPVVREAYLSQFHEDFTMFLNARSQEVVPNGCMVLILRGRQCSDPSDM 235
Query: 236 SNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKM 295
+ + +L +L G++ E+K+D+FN+P+Y A+ +E++ I+ +G+FTI+ +
Sbjct: 236 QSCFTW---ELLAMAIAELVSQGLIDEDKLDTFNIPSYFASLEEVKDIVERDGSFTIDHI 292
Query: 296 E-------KLSQPRRRITANEYASGIRAGIDGLIKKHFGDEFVDEIFNYFTTKVEENYSI 348
E ++ + + + ++ +RA + +I FG E +D++++ FT V S
Sbjct: 293 EGFDLDSVEMQENDKWVRGEKFTKVVRAFTEPIISNQFGPEIMDKLYDKFTHIV---VSD 349
Query: 349 IEEKIRNVSNLFISLKR 365
+E K+ +++ + L +
Sbjct: 350 LEAKLPKTTSIILVLSK 366
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Involved in the biosynthesis of caffeine. Catalyzes the conversion of 7-methylxanthine (7mX) to theobromine and of theobromine to caffeine. Has 3-N- and 1-N-methylation activity. Camellia sinensis (taxid: 4442) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 6 EC: 0 |
| >sp|Q68CM3|TCS2_CAMSI Probable caffeine synthase 2 OS=Camellia sinensis GN=TCS2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 204 bits (518), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 127/380 (33%), Positives = 196/380 (51%), Gaps = 48/380 (12%)
Query: 11 EAYPMVGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIADLG 70
EA M G+ SYA NS++ + V ++ A+ L+ DLG
Sbjct: 6 EALFMNKGEGESSYAQNSSFTQTVTSMTMPVLENAVETLFSKDF----HLLQALNAVDLG 61
Query: 71 CSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP--- 127
C+ GP T + I +E K R N LE QV+LND NDFNTLFK LP
Sbjct: 62 CAAGPTTFTVISTIKRMMEKKC-RELNCQ----TLELQVYLNDLPGNDFNTLFKGLPSKV 116
Query: 128 -----HARKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGS 182
+ G+PGSFH RLFPR+S+H VH+ Y++HWL++ PK + A NKG
Sbjct: 117 VGNKCEEVSCYVVGVPGSFHGRLFPRNSLHLVHSCYSVHWLTQAPKGLTSKEGLALNKGK 176
Query: 183 IQCSESNIEVVR-AYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVG 241
I S+++ VVR AY +Q+ D FLN+R++E+VP G MVLIL +
Sbjct: 177 IYISKTSPPVVREAYLSQFHEDFTMFLNSRSQEVVPNGCMVLILRGRLSSD--------- 227
Query: 242 VFNNILGSCFN---------DLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTI 292
+ +GSCF +L G++ E+K+D+FN+P+Y + +E++ I+ NG+FTI
Sbjct: 228 --PSDMGSCFTWELLAVAIAELVSQGLIDEDKLDTFNVPSYFPSLEEVKDIVERNGSFTI 285
Query: 293 EKME--KLSQPR-----RRITANEYASGIRAGIDGLIKKHFGDEFVDEIFNYFTTKVEEN 345
+ ME +L P + + ++A+ RA + +I FG E +D+++ FT V +
Sbjct: 286 DHMEGFELDSPEMQENDKWVRGEKFATVARAFTEPIISNQFGHEIMDKLYEKFTHIVVSD 345
Query: 346 YSIIEEKIRNVSNLFISLKR 365
+ E KI ++++ + L +
Sbjct: 346 F---EAKIPKITSIILVLSK 362
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May be involved in the biosynthesis of caffeine. Catalyzes the conversion of 7-methylxanthine (7mX) to theobromine and of theobromine to caffeine. Has 1-N-methylation activity. Camellia sinensis (taxid: 4442) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 6 EC: 0 |
| >sp|Q9FYZ9|BAMT_ANTMA Benzoate carboxyl methyltransferase OS=Antirrhinum majus GN=BAMT PE=1 SV=1 | Back alignment and function description |
|---|
Score = 202 bits (513), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 126/354 (35%), Positives = 192/354 (54%), Gaps = 37/354 (10%)
Query: 16 VGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIADLGCSVGP 75
+ GD SYANNS Q+ ++ + ++ E + D + + GF K FK+ D+GCS GP
Sbjct: 12 IAGDGETSYANNSGLQKVMMSKSLHVLDETLKDIIGDHV-GFP---KCFKMMDMGCSSGP 67
Query: 76 NTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHAR-KYFA 134
N LL + II IE N+++ P EF+VFLND DNDFN LFK L H F
Sbjct: 68 NALLVMSGIINTIE-DLYTEKNINELP---EFEVFLNDLPDNDFNNLFKLLSHENGNCFV 123
Query: 135 AGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSI-QCSESNIEVV 193
GLPGSF+ RL P+ S+HF ++SY++HWLS+VP+ + D N+ +I +ES EV
Sbjct: 124 YGLPGSFYGRLLPKKSLHFAYSSYSIHWLSQVPEGLEDN-----NRQNIYMATESPPEVY 178
Query: 194 RAYSTQYKNDMESFLNARAEELVPGGLMVLIL-AAVVPDGIPLSNSYVGVFNNILGSCFN 252
+AY+ QY+ D +FL R EE+VPGG MVL V D P S + +F +L
Sbjct: 179 KAYAKQYERDFSTFLKLRGEEIVPGGRMVLTFNGRSVED--PSSKDDLAIFT-LLAKTLV 235
Query: 253 DLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKL-------------- 298
D+ G++ + + SFN+P Y+ +E+EA I + G+FT++++E
Sbjct: 236 DMVAEGLVKMDDLYSFNIPIYSPCTREVEAAILSEGSFTLDRLEVFRVCWDASDYTDDDD 295
Query: 299 ----SQPRRRITANEYASGIRAGIDGLIKKHFGDEFVDEIFNYFTTKVEENYSI 348
S ++ + A +RA + ++ HFG +D +F + K+ E+ S+
Sbjct: 296 QQDPSIFGKQRSGKFVADCVRAITEPMLASHFGSTIMDLLFGKYAKKIVEHLSV 349
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Converts benzoic acid into the volatile ester methyl benzoates. This scent, mostly produced in a rhythmical, diurnal manner, attracts the pollinators. Antirrhinum majus (taxid: 4151) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q9AVK0|XMT1_COFAR 7-methylxanthosine synthase 1 OS=Coffea arabica GN=XMT1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 200 bits (508), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 126/352 (35%), Positives = 186/352 (52%), Gaps = 33/352 (9%)
Query: 9 LTEAYPMVGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIAD 68
L E M GG+ SYA NS Y + V+ K ++ + + + L + + K K+AD
Sbjct: 3 LQEVLRMNGGEGDTSYAKNSAYNQLVLAKVKPVLEQCVRELLRANLPNIN---KCIKVAD 59
Query: 69 LGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP- 127
LGC+ GPNTLL V++I+++I+ Q N ++P+ Q+FLND NDFN++FK LP
Sbjct: 60 LGCASGPNTLLTVRDIVQSIDKVGQEKKNELERPT---IQIFLNDLFPNDFNSVFKLLPS 116
Query: 128 --------HARKY---FAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSP 176
+ RK +PGSF+SRLFP S+HF+H+ Y L WLS+VP +V
Sbjct: 117 FYRKLEKENGRKIGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLQWLSQVPSGLVTELGI 176
Query: 177 AWNKGSIQCSE-SNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIPL 235
+ NKGSI S+ S + V +AY Q+ D +FL +EEL G M+L + G+ L
Sbjct: 177 STNKGSIYSSKASRLPVQKAYLDQFTKDFTTFLRIHSEELFSHGRMLL---TCICKGVEL 233
Query: 236 SNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKM 295
++L NDL G L EEK+DSFNLP Y + +E++ I+ G+F I +
Sbjct: 234 DARNA---IDLLEMAINDLVVEGHLEEEKLDSFNLPVYIPSAEEVKCIVEEEGSFEILYL 290
Query: 296 EK--------LSQPRRRITANEYASGIRAGIDGLIKKHFGDEFVDEIFNYFT 339
E S I A AS +RA + ++ HFG+ + +IF+ F
Sbjct: 291 ETFKVLYDAGFSIDDEHIKAEYVASSVRAVYEPILASHFGEAIIPDIFHRFA 342
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Involved in the biosynthesis of caffeine. Specific for xanthosine and could not use xanthosine 5'-monophosphate (XMP) as substrate. Catalyzes the 7-N-methylation activity of xanthosine, but does not have 1-N- or 3-N-methylation activity. Coffea arabica (taxid: 13443) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 5 EC: 8 |
| >sp|A4GE69|XMT1_COFCA 7-methylxanthosine synthase 1 OS=Coffea canephora GN=XMT1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 200 bits (508), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 126/352 (35%), Positives = 185/352 (52%), Gaps = 33/352 (9%)
Query: 9 LTEAYPMVGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIAD 68
L E M GG+ SYA NS Y + V+ K ++ + + + L + + K K+AD
Sbjct: 3 LQEVLRMNGGEGDTSYAKNSAYNQLVLAKVKPVLEQCVRELLRANLPNIN---KCIKVAD 59
Query: 69 LGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP- 127
LGC+ GPNTLL V++I+++I+ Q N ++P+ Q+FLND NDFN++FK LP
Sbjct: 60 LGCASGPNTLLTVRDIVQSIDKVGQEKKNELERPT---IQIFLNDLFPNDFNSVFKLLPS 116
Query: 128 --------HARKY---FAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSP 176
+ RK +PGSF+SRLFP S+HF+H+ Y L WLS+VP +V
Sbjct: 117 FYRKLEKENGRKIGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLQWLSQVPSGLVTELGI 176
Query: 177 AWNKGSIQCSE-SNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIPL 235
NKGSI S+ S + V +AY Q+ D +FL +EEL G M+L + G+ L
Sbjct: 177 GTNKGSIYSSKASRLPVQKAYLDQFTKDFTTFLRIHSEELFSHGRMLL---TCICKGVEL 233
Query: 236 SNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKM 295
++L NDL G L EEK+DSFNLP Y + +E++ I+ G+F I +
Sbjct: 234 DARNA---IDLLEMAINDLVVEGHLEEEKLDSFNLPVYIPSAEEVKCIVEEEGSFEILYL 290
Query: 296 EK--------LSQPRRRITANEYASGIRAGIDGLIKKHFGDEFVDEIFNYFT 339
E S I A AS +RA + ++ HFG+ + +IF+ F
Sbjct: 291 ETFKVLYDAGFSIDDEHIKAEYVASSVRAVYEPILASHFGEAIIPDIFHRFA 342
|
Involved in the biosynthesis of caffeine. Specific for xanthosine. Cannot use xanthosine 5'-monophosphate (XMP) as substrate. Directly produces 7-methylxanthine, and therefore the methyl transfer and nucleoside cleavage may be coupled. Catalyzes the 7-N-methylation of xanthosine, but does not have 1-N- or 3-N-methylation activity. Coffea canephora (taxid: 49390) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 5 EC: 8 |
| >sp|Q9SPV4|SAMT_CLABR Salicylate O-methyltransferase OS=Clarkia breweri GN=SAMT PE=1 SV=1 | Back alignment and function description |
|---|
Score = 196 bits (498), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 131/372 (35%), Positives = 192/372 (51%), Gaps = 45/372 (12%)
Query: 15 MVGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIADLGCSVG 74
M GG SYA NS QR V+ K + AI + D IADLGCS G
Sbjct: 9 MKGGAGENSYAMNSFIQRQVISITKPITEAAIT-----ALYSGDTVTTRLAIADLGCSSG 63
Query: 75 PNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKY-- 132
PN L AV +I+ +E + ++ P E+Q+FLND NDFN +F+SLP
Sbjct: 64 PNALFAVTELIKTVE-ELRKKMGRENSP---EYQIFLNDLPGNDFNAIFRSLPIENDVDG 119
Query: 133 --FAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSI----QCS 186
F G+PGSF+ RLFPR+++HF+H+SY+L WLS+VP I NKG+I C
Sbjct: 120 VCFINGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIES------NKGNIYMANTCP 173
Query: 187 ESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVL-ILAAVVPDGIPLSNSYVGVFNN 245
+S V+ AY Q++ D FL RA+E+VPGG MVL IL D +++ +
Sbjct: 174 QS---VLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRSED---RASTECCLIWQ 227
Query: 246 ILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLSQPRRRI 305
+L N + G++ EEK+D FN+P Y +P E+EA I G+F I+ +E
Sbjct: 228 LLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWSSC 287
Query: 306 TANEYASG------------IRAGIDGLIKKHFGDEFVDEIFNYFTTKVEENYSIIEEKI 353
T + G +RA + L+ HFG+ ++++F+ + + E S +EK
Sbjct: 288 TKDGDGGGSVEEEGYNVARCMRAVAEPLLLDHFGEAIIEDVFHRYKLLIIERMS--KEKT 345
Query: 354 RNVSNLFISLKR 365
+ + N+ +SL R
Sbjct: 346 KFI-NVIVSLIR 356
|
Catalyzes the methylation of the free carboxyl end of the plant hormone salicylic acid (SA). Converts SA to SA methyl ester (MSA). The volatile compound MSA is hypothesized to act as an airborne signal that triggers defense responses in uninfected plants. MSA is an important chemoattractant for moth pollinated flowering plants. Clarkia breweri (taxid: 36903) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: n EC: 9 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 367 | ||||||
| 224069525 | 370 | predicted protein [Populus trichocarpa] | 0.989 | 0.981 | 0.539 | 1e-109 | |
| 225456081 | 369 | PREDICTED: probable S-adenosylmethionine | 0.964 | 0.959 | 0.512 | 4e-98 | |
| 225424405 | 361 | PREDICTED: probable S-adenosylmethionine | 0.964 | 0.980 | 0.479 | 1e-95 | |
| 224144825 | 351 | predicted protein [Populus trichocarpa] | 0.945 | 0.988 | 0.512 | 2e-95 | |
| 147833899 | 521 | hypothetical protein VITISV_030502 [Viti | 0.950 | 0.669 | 0.492 | 3e-95 | |
| 296087219 | 806 | unnamed protein product [Vitis vinifera] | 0.950 | 0.433 | 0.492 | 2e-94 | |
| 224118708 | 364 | predicted protein [Populus trichocarpa] | 0.915 | 0.923 | 0.5 | 4e-94 | |
| 297737614 | 347 | unnamed protein product [Vitis vinifera] | 0.926 | 0.979 | 0.492 | 7e-94 | |
| 225462819 | 377 | PREDICTED: probable S-adenosylmethionine | 0.940 | 0.915 | 0.492 | 1e-93 | |
| 297737616 | 402 | unnamed protein product [Vitis vinifera] | 0.953 | 0.870 | 0.465 | 4e-93 |
| >gi|224069525|ref|XP_002302990.1| predicted protein [Populus trichocarpa] gi|222844716|gb|EEE82263.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/369 (53%), Positives = 258/369 (69%), Gaps = 6/369 (1%)
Query: 1 MAHIESNNLTEAYPMVGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDT 60
MA E L +++ MVGGD SY NS YQ+GVVDA+KE ++E I DKLD K LGFD +
Sbjct: 1 MATEEIKELPKSWAMVGGDGPQSYTQNSAYQKGVVDASKEKVTEGIKDKLDFKSLGFDSS 60
Query: 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFN 120
F+IAD GCSVGPNT AV+NIIEA+E K+Q P LEFQVF ND + NDFN
Sbjct: 61 NDTFRIADFGCSVGPNTFFAVENIIEAVEQKYQAQFQ-KSPPLELEFQVFFNDVTTNDFN 119
Query: 121 TLFKSLPHARKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNK 180
TLFK+L RKYFAAGLPG+F+ RL P+S++HF ++SY L WLSKVPKE+VD SPAWNK
Sbjct: 120 TLFKTLHSNRKYFAAGLPGTFYGRLLPKSTLHFAYSSYCLQWLSKVPKEVVDSKSPAWNK 179
Query: 181 GSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYV 240
GSIQC EV +AYS Q+++DM +FLNARA+E+V GGLMV+I+A +PDGI +S + V
Sbjct: 180 GSIQCDGLKKEVTKAYSAQFQSDMNTFLNARAQEIVGGGLMVIIMAG-LPDGIFMSQAGV 238
Query: 241 GVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLS- 299
G++ +LGSC D+AK+G +SEEKVDSFNLP Y ++ E+E II+ NGNF IE M+ LS
Sbjct: 239 GMYYELLGSCLVDMAKLGEISEEKVDSFNLPLYYSSSTEIEEIIKENGNFNIEIMDSLSH 298
Query: 300 ---QPRRRITANEYASGIRAGIDGLIKKHFGDEFVDEIFNYFTTKVEENYSIIEEKIRNV 356
+ ++ SG RA GL+++HFG E V++ F +F K+ +N+SI +
Sbjct: 299 QIWKTSKKSNIEVSVSGGRAVFQGLVEEHFGSEVVEKTFEHFAKKLVDNFSIFDGAAHEH 358
Query: 357 SNLFISLKR 365
+ FI LKR
Sbjct: 359 IDHFILLKR 367
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225456081|ref|XP_002277876.1| PREDICTED: probable S-adenosylmethionine-dependent methyltransferase At5g38780 [Vitis vinifera] gi|297734281|emb|CBI15528.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 364 bits (934), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 189/369 (51%), Positives = 246/369 (66%), Gaps = 15/369 (4%)
Query: 5 ESNNLTEAYPMVGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPF 64
E N+ EA+PM GD YSY+NNS QRGV++AAK+++SEAI + LD IL F +
Sbjct: 6 EMRNIGEAHPMKSGDGLYSYSNNSYLQRGVMNAAKQIVSEAIVENLD--ILKFSPSTT-V 62
Query: 65 KIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFK 124
++ADLGCSVGPNT AVQNI+EAIEL+ Q Q P EFQVF NDH+ NDFN+LF
Sbjct: 63 RVADLGCSVGPNTFFAVQNILEAIELECQNQGLDSQIP---EFQVFFNDHTSNDFNSLFS 119
Query: 125 SLPHARKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQ 184
SLP R+Y AAG+PGSF+SRLFP S+H VH+S A+ WLS+VPK++VD S AWNKG I
Sbjct: 120 SLPPNRRYHAAGVPGSFYSRLFPNRSLHIVHSSCAIQWLSRVPKKVVDRSSQAWNKGRIY 179
Query: 185 CSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFN 244
+ EVV AYS Q DM FL ARA+E+ GGLM+LI AA PD IP S + +
Sbjct: 180 YPSAADEVVEAYSAQCAEDMARFLQARAQEIADGGLMILIFAA-RPDEIPHSQLVANIMH 238
Query: 245 NILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKL------ 298
++LG C D+AK G++SEEKVD FNLP Y+ + +ELEA + NG F+IE+ME L
Sbjct: 239 DMLGCCLMDMAKKGIVSEEKVDMFNLPVYHMSDQELEAAVERNGCFSIERMESLPPISST 298
Query: 299 --SQPRRRITANEYASGIRAGIDGLIKKHFGDEFVDEIFNYFTTKVEENYSIIEEKIRNV 356
S R A + +RA ++ LIK HFG+E +D++F+ ++ K+E+ YS+IE +
Sbjct: 299 LQSLVSTRHKAQAISFHVRAAMEDLIKAHFGEEILDQLFDSYSKKLEQEYSLIESAGTSA 358
Query: 357 SNLFISLKR 365
NL LKR
Sbjct: 359 LNLCAVLKR 367
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225424405|ref|XP_002284898.1| PREDICTED: probable S-adenosylmethionine-dependent methyltransferase At5g37990-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 355 bits (912), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 178/371 (47%), Positives = 248/371 (66%), Gaps = 17/371 (4%)
Query: 1 MAHIESNNLTEAYPMVGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDT 60
M++ + +++PM GGD +SY NNS QR DA + +I EAIA KLD+K +
Sbjct: 1 MSNNRAATTQQSFPMKGGDGPHSYVNNSHLQREATDACRTMIEEAIAQKLDVKCF----S 56
Query: 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFN 120
PF++ADLGCSVGPNT +++Q+I+EA+E K+ Q P EFQVF NDH NDFN
Sbjct: 57 SNPFRLADLGCSVGPNTFISMQHIVEAVERKYLEQGLKSQIP---EFQVFFNDHVANDFN 113
Query: 121 TLFKSLPHARKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNK 180
TLF SLP R+YFA G+PGSFH RLFP SSIHF+ +S+A+HWLSKVP+E++D SPAWN+
Sbjct: 114 TLFASLPTERRYFACGVPGSFHGRLFPESSIHFMFSSHAIHWLSKVPEELLDKNSPAWNR 173
Query: 181 GSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYV 240
G I + + EV AY+ Q+ +DME FL+ARA+ELV GG++VL +AA +P+GIP S
Sbjct: 174 GRIHYTSAPDEVSHAYAAQFDHDMEIFLSARAKELVVGGIIVLTMAA-LPNGIPASRIPS 232
Query: 241 GVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKME---- 296
GV ++LG+ D+ K G+++E +VDSFNLP Y + +++ +++ NG FTIE+ME
Sbjct: 233 GVMFDLLGASLMDMTKAGLINEAQVDSFNLPVYAPSQEQMTDLVKRNGCFTIERMELVYR 292
Query: 297 --KLSQPRRRITANEYASGIRAGIDGLIKKHFGDEFVDEIFNYFTTKVEENYSIIEEKIR 354
KL P IT E +RAG++G+I KHFG +DE+F+ F+ K E +E R
Sbjct: 293 ASKLVAP---ITGKECGMHLRAGMEGMIAKHFGSGIIDELFDTFSKKSVEFSHQLESSTR 349
Query: 355 NVSNLFISLKR 365
+ LF +L+R
Sbjct: 350 EGAQLFAALRR 360
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224144825|ref|XP_002336178.1| predicted protein [Populus trichocarpa] gi|222875362|gb|EEF12493.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 182/355 (51%), Positives = 243/355 (68%), Gaps = 8/355 (2%)
Query: 15 MVGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDT-LKPFKIADLGCSV 73
MVGGD SYA NS+YQRG + EL++E I DKL+ D + + F+IAD GCS
Sbjct: 1 MVGGDGPRSYAQNSSYQRGGLVIVNELMNEGIKDKLEFISPCSDSSNICTFRIADFGCSA 60
Query: 74 GPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYF 133
GPNT LA++ IIEA+E K+ P LEFQVF ND + NDFNTLFK+LP +KYF
Sbjct: 61 GPNTFLAMEKIIEAVEQKYH--AQFKNSP-PLEFQVFFNDVTTNDFNTLFKTLPLYQKYF 117
Query: 134 AAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVV 193
AAG+PG+F+ RLFP+S++ ++SY+LHWLSKVP+E+VD SPAWNKGSIQCS + EV
Sbjct: 118 AAGVPGTFYGRLFPKSTLRLAYSSYSLHWLSKVPEEVVDTKSPAWNKGSIQCSGTAKEVA 177
Query: 194 RAYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFND 253
+AYS Q+K DM++FLNARA+E++ GGLMV+I+ +PDGI LS + G + GSC D
Sbjct: 178 KAYSAQFKTDMDNFLNARAQEIIGGGLMVIIILG-LPDGILLSQTVAGKSYELFGSCLID 236
Query: 254 LAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLSQP--RRRITANEYA 311
+AK+GV+SEEKVD+FNLP Y ++ KELE II+ +G+F IE++ L+ P +R+I +
Sbjct: 237 MAKLGVISEEKVDTFNLPLYYSSAKELEEIIKNHGHFCIERLNMLNHPMMKRKIDVQSHI 296
Query: 312 SGIRAGIDGLIKKHFGDEFVDEIFNYFTTKVEENY-SIIEEKIRNVSNLFISLKR 365
S R+ GL++ HFG + VD+I Y K+ ENY S+ FI LKR
Sbjct: 297 SQFRSIFQGLLEAHFGRDDVDKILEYHAKKLAENYDSVFNVAKHQHVEHFILLKR 351
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147833899|emb|CAN73170.1| hypothetical protein VITISV_030502 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 354 bits (909), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 176/357 (49%), Positives = 246/357 (68%), Gaps = 8/357 (2%)
Query: 11 EAYPMVGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIADLG 70
E+Y M GD YSYA S+YQ+ +VDAAK+++ EAI+D LD+ F + +IAD+G
Sbjct: 141 ESYHMNSGDGPYSYAKYSSYQKAIVDAAKKMLVEAISDNLDINNPSFGSS-NTLRIADMG 199
Query: 71 CSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHAR 130
CS+GPN +AVQNI+EA+ LK+Q ++ QKP ALEF VF NDH NDFN LF+SLP +R
Sbjct: 200 CSIGPNAFIAVQNIVEAVTLKYQ---SMQQKPQALEFHVFFNDHXANDFNALFRSLPPSR 256
Query: 131 KYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNI 190
YFA G+PGSFH RLFP+SS+H VH+SYALHWLSKVPKE+++ G S ++
Sbjct: 257 PYFAVGVPGSFHGRLFPKSSLHIVHSSYALHWLSKVPKEVMEJNFLGLKNGR-NYSTTDE 315
Query: 191 EVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSC 250
EV+ +S+QYK DM+SFL ARA+ELV GGLMVL++ + +G S + G+ N+ GSC
Sbjct: 316 EVLEVFSSQYKRDMQSFLTARAQELVGGGLMVLLVTG-MQNGAIFSKTCSGMVFNLFGSC 374
Query: 251 FNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLSQPRRRITANEY 310
D+A G++S EKV SF+ P Y TPKELEA+I TNG F IE++E L++P +
Sbjct: 375 LMDMANAGLVSNEKVYSFHFPLYYTTPKELEALIETNGYFNIERIEILARPLEHELPDYR 434
Query: 311 ASG--IRAGIDGLIKKHFGDEFVDEIFNYFTTKVEENYSIIEEKIRNVSNLFISLKR 365
+RA ++GL+++HFG E ++++F +T K+ EN I +E+ R ++LF+ L+R
Sbjct: 435 ICSFHLRAAMEGLVEEHFGKEIIEDLFERYTNKLGENSFIFDEEYRKETHLFVFLRR 491
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296087219|emb|CBI33593.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 176/357 (49%), Positives = 246/357 (68%), Gaps = 8/357 (2%)
Query: 11 EAYPMVGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIADLG 70
E+Y M GD YSYA S+YQ+ +VDAAK+++ EAI+D LD+ F + +IAD+G
Sbjct: 426 ESYHMNSGDGPYSYAKYSSYQKAIVDAAKKMLVEAISDNLDINNPSFGSS-NTLRIADMG 484
Query: 71 CSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHAR 130
CS+GPN +AVQNI+EA+ LK+Q ++ QKP ALEF VF NDH NDFN LF+SLP +R
Sbjct: 485 CSIGPNAFIAVQNIVEAVTLKYQ---SMQQKPQALEFHVFFNDHIANDFNALFRSLPPSR 541
Query: 131 KYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNI 190
YFA G+PGSFH RLFP+SS+H VH+SYALHWLSKVPKE+++ G S ++
Sbjct: 542 PYFAVGVPGSFHGRLFPKSSLHIVHSSYALHWLSKVPKEVMEINFLGLKNGR-NYSTTDE 600
Query: 191 EVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSC 250
EV+ +S+QYK DM+SFL ARA+ELV GGLMVL++ + +G S + G+ N+ GSC
Sbjct: 601 EVLEVFSSQYKRDMQSFLTARAQELVGGGLMVLLVTG-MQNGAIFSKTCSGMVFNLFGSC 659
Query: 251 FNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLSQPRRRITANEY 310
D+A G++S EKV SF+ P Y TPKELEA+I TNG F IE++E L++P +
Sbjct: 660 LMDMANAGLVSNEKVYSFHFPLYYTTPKELEALIETNGYFNIERIEILARPLEHELPDYR 719
Query: 311 ASG--IRAGIDGLIKKHFGDEFVDEIFNYFTTKVEENYSIIEEKIRNVSNLFISLKR 365
+RA ++GL+++HFG E ++++F +T K+ EN I +E+ R ++LF+ L+R
Sbjct: 720 ICSFHLRAAMEGLVEEHFGKEIIEDLFERYTNKLGENSFIFDEEYRKETHLFVFLRR 776
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224118708|ref|XP_002317887.1| predicted protein [Populus trichocarpa] gi|222858560|gb|EEE96107.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 350 bits (899), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 173/346 (50%), Positives = 247/346 (71%), Gaps = 10/346 (2%)
Query: 4 IESNNLTEAYPMVGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKP 63
+++ N ++A PM GG YSY+ NSTYQ+ V+ A K+LI+EAIA+KLD+ +L +T+
Sbjct: 5 VQNVNFSKALPMNGGHGLYSYSKNSTYQKKVIVAVKDLITEAIAEKLDICVLSSSNTIC- 63
Query: 64 FKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLF 123
I+D+GCSVGPNT +AVQNI+EA+ K+Q + H + EFQVFLNDH+ NDFNTLF
Sbjct: 64 --ISDMGCSVGPNTFVAVQNIVEAVLNKYQSQGHDHSRLP--EFQVFLNDHALNDFNTLF 119
Query: 124 KSLPHARKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSI 183
KSLP R Y+ AG+PGSFH RLFP S+H VHTSYAL+WLS+VPKE+ D SPAWNKG I
Sbjct: 120 KSLPPNRNYYVAGMPGSFHGRLFPNDSLHIVHTSYALNWLSQVPKEVEDVSSPAWNKGRI 179
Query: 184 QCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVF 243
S + + V+A++ Q+ D++ FL+ARA+E+V GGL++L++ + D P + +
Sbjct: 180 YYSSAGDQTVKAFADQFAEDLDCFLHARAQEVVRGGLIILMVPGRL-DTSPHTRVVSNIS 238
Query: 244 NNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLSQPRR 303
+ILGSC D+AKMG++SEEKVDSFN+P Y ++P+E+EA + NG F +E++E L +
Sbjct: 239 YDILGSCLMDMAKMGIISEEKVDSFNIPIYFSSPQEVEATVERNGYFNLERLECLPLEKS 298
Query: 304 RITANEYASG----IRAGIDGLIKKHFGDEFVDEIFNYFTTKVEEN 345
+ T + A IRAG++ L+K+HFG E +DE+F+ F K+E++
Sbjct: 299 QDTIPQKARAVSYHIRAGLEYLLKEHFGHEILDELFDSFNKKLEKS 344
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297737614|emb|CBI26815.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 350 bits (897), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 176/357 (49%), Positives = 240/357 (67%), Gaps = 17/357 (4%)
Query: 15 MVGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIADLGCSVG 74
M GGD +SY NNS QR DA + +I EAIA KLD+K + PF++ADLGCSVG
Sbjct: 1 MKGGDGPHSYVNNSHLQREATDACRTMIEEAIAQKLDVKCF----SSNPFRLADLGCSVG 56
Query: 75 PNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFA 134
PNT +++Q+I+EA+E K+ Q P EFQVF NDH NDFNTLF SLP R+YFA
Sbjct: 57 PNTFISMQHIVEAVERKYLEQGLKSQIP---EFQVFFNDHVANDFNTLFASLPTERRYFA 113
Query: 135 AGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVR 194
G+PGSFH RLFP SSIHF+ +S+A+HWLSKVP+E++D SPAWN+G I + + EV
Sbjct: 114 CGVPGSFHGRLFPESSIHFMFSSHAIHWLSKVPEELLDKNSPAWNRGRIHYTSAPDEVSH 173
Query: 195 AYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDL 254
AY+ Q+ +DME FL+ARA+ELV GG++VL +AA +P+GIP S GV ++LG+ D+
Sbjct: 174 AYAAQFDHDMEIFLSARAKELVVGGIIVLTMAA-LPNGIPASRIPSGVMFDLLGASLMDM 232
Query: 255 AKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKME------KLSQPRRRITAN 308
K G+++E +VDSFNLP Y + +++ +++ NG FTIE+ME KL P IT
Sbjct: 233 TKAGLINEAQVDSFNLPVYAPSQEQMTDLVKRNGCFTIERMELVYRASKLVAP---ITGK 289
Query: 309 EYASGIRAGIDGLIKKHFGDEFVDEIFNYFTTKVEENYSIIEEKIRNVSNLFISLKR 365
E +RAG++G+I KHFG +DE+F+ F+ K E +E R + LF +L+R
Sbjct: 290 ECGMHLRAGMEGMIAKHFGSGIIDELFDTFSKKSVEFSHQLESSTREGAQLFAALRR 346
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225462819|ref|XP_002266476.1| PREDICTED: probable S-adenosylmethionine-dependent methyltransferase At5g37990 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 349 bits (895), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 174/353 (49%), Positives = 243/353 (68%), Gaps = 8/353 (2%)
Query: 15 MVGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIADLGCSVG 74
M GD YSYA S+YQ+ +VDAAK+++ EAI+D LD+ F + +IAD+GCS+G
Sbjct: 1 MNSGDGPYSYAKYSSYQKAIVDAAKKMLVEAISDNLDINNPSFGSS-NTLRIADMGCSIG 59
Query: 75 PNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFA 134
PN +AVQNI+EA+ LK+Q ++ QKP ALEF VF NDH NDFN LF+SLP +R YFA
Sbjct: 60 PNAFIAVQNIVEAVTLKYQ---SMQQKPQALEFHVFFNDHIANDFNALFRSLPPSRPYFA 116
Query: 135 AGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVR 194
G+PGSFH RLFP+SS+H VH+SYALHWLSKVPKE+++ G S ++ EV+
Sbjct: 117 VGVPGSFHGRLFPKSSLHIVHSSYALHWLSKVPKEVMEINFLGLKNGR-NYSTTDEEVLE 175
Query: 195 AYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDL 254
+S+QYK DM+SFL ARA+ELV GGLMVL++ + +G S + G+ N+ GSC D+
Sbjct: 176 VFSSQYKRDMQSFLTARAQELVGGGLMVLLVTG-MQNGAIFSKTCSGMVFNLFGSCLMDM 234
Query: 255 AKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLSQPRRRITANEYASG- 313
A G++S EKV SF+ P Y TPKELEA+I TNG F IE++E L++P +
Sbjct: 235 ANAGLVSNEKVYSFHFPLYYTTPKELEALIETNGYFNIERIEILARPLEHELPDYRICSF 294
Query: 314 -IRAGIDGLIKKHFGDEFVDEIFNYFTTKVEENYSIIEEKIRNVSNLFISLKR 365
+RA ++GL+++HFG E ++++F +T K+ EN I +E+ R ++LF+ L+R
Sbjct: 295 HLRAAMEGLVEEHFGKEIIEDLFERYTNKLGENSFIFDEEYRKETHLFVFLRR 347
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297737616|emb|CBI26817.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 347 bits (891), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 171/367 (46%), Positives = 251/367 (68%), Gaps = 17/367 (4%)
Query: 5 ESNNLTEAYPMVGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPF 64
++ + +++PM GGD +SY NNS +QR ++ ++ +I EAIA KLD+K + PF
Sbjct: 46 DAATMQQSFPMNGGDGPHSYRNNSHFQRQDMNVSRTMIEEAIAKKLDVKCF----SSNPF 101
Query: 65 KIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFK 124
++A+LGCSVGPNT +A+Q+I+EA+E ++ + P EFQVF NDH NDFNTLF
Sbjct: 102 RLANLGCSVGPNTFIAMQHIVEAVERRYLVQGLKSEMP---EFQVFFNDHVGNDFNTLFA 158
Query: 125 SLPHARKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQ 184
SLP R+YFA G+PGSFH RLFP SSIHF+ +S+ALHWLSKVP+E++D SPAWN+G I
Sbjct: 159 SLPTERRYFACGVPGSFHGRLFPESSIHFMFSSHALHWLSKVPEELLDKNSPAWNRGRIH 218
Query: 185 CSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFN 244
+ EV AY+ Q+++DME FL+ARA+ELV GG++V ++ A +P+GIP S + G+
Sbjct: 219 YTSGPEEVSHAYAAQFEHDMEIFLSARAKELVVGGMIVFLILA-LPNGIPASQNPYGIMF 277
Query: 245 NILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKME------KL 298
++LGSC D+AK G++SE +VDSFNLP + A+P+++ ++ N TIE+ME KL
Sbjct: 278 DLLGSCLMDMAKEGLISEAQVDSFNLPIHLASPEQMTELVERNECLTIERMELVNSRSKL 337
Query: 299 SQPRRRITANEYASGIRAGIDGLIKKHFGDEFVDEIFNYFTTKVEENYSIIEEKIRNVSN 358
P I EYA +RAG++G+ +HFG +D++F+ F+ K+ E+ +E +
Sbjct: 338 VGP---INGKEYAMYLRAGLEGIFAQHFGSGIIDQLFDSFSKKIMESSHQLESGNKEGIL 394
Query: 359 LFISLKR 365
LF+ L+R
Sbjct: 395 LFVVLRR 401
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 367 | ||||||
| TAIR|locus:2166640 | 361 | AT5G38780 [Arabidopsis thalian | 0.959 | 0.975 | 0.444 | 3e-78 | |
| TAIR|locus:2144461 | 359 | AT5G38100 [Arabidopsis thalian | 0.942 | 0.963 | 0.460 | 3.5e-75 | |
| TAIR|locus:2082157 | 348 | AT3G44840 [Arabidopsis thalian | 0.885 | 0.933 | 0.461 | 5.1e-74 | |
| TAIR|locus:504956193 | 351 | AT1G15125 [Arabidopsis thalian | 0.934 | 0.977 | 0.439 | 2.5e-72 | |
| TAIR|locus:2200186 | 363 | AT1G68040 [Arabidopsis thalian | 0.940 | 0.950 | 0.421 | 8.9e-70 | |
| TAIR|locus:2082117 | 379 | AT3G44870 "AT3G44870" [Arabido | 0.877 | 0.849 | 0.426 | 2.1e-68 | |
| TAIR|locus:2082112 | 348 | FAMT "farnesoic acid carboxyl- | 0.885 | 0.933 | 0.437 | 2.1e-68 | |
| TAIR|locus:2033389 | 352 | AT1G66720 [Arabidopsis thalian | 0.942 | 0.982 | 0.406 | 3.1e-67 | |
| TAIR|locus:2033409 | 353 | PXMT1 [Arabidopsis thaliana (t | 0.942 | 0.980 | 0.416 | 2.8e-66 | |
| TAIR|locus:2033414 | 353 | AT1G66690 "AT1G66690" [Arabido | 0.945 | 0.983 | 0.407 | 3.2e-65 |
| TAIR|locus:2166640 AT5G38780 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 787 (282.1 bits), Expect = 3.0e-78, P = 3.0e-78
Identities = 160/360 (44%), Positives = 226/360 (62%)
Query: 10 TEAYPMVGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIADL 69
+++YPM GGDD +SY +NS+YQ+ +D +E + I + LDL L + L F IAD
Sbjct: 5 SQSYPMSGGDDQHSYIHNSSYQKAGIDGVQEKARQYILENLDL--LNMNPNLSTFTIADF 62
Query: 70 GCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHA 129
GCS+GPNT AVQNII+ ++LK + + + + LEFQV+ ND +NDFNTLF++ P +
Sbjct: 63 GCSIGPNTFHAVQNIIDIVKLKHLKESQEDSRVAPLEFQVYFNDLPNNDFNTLFRTQPPS 122
Query: 130 RK--YFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSE 187
K YF+ G+PGSF+ R+ PR+SIH +TS+ HWLSKVP+E+ D S AWNK I C+
Sbjct: 123 SKQEYFSVGVPGSFYGRVLPRNSIHIGNTSFTTHWLSKVPEEVCDKNSLAWNKNYIHCNN 182
Query: 188 SNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNIL 247
EV AY Q++ DM FL ARAEELVPGGLM+ L +PDG+ + ++ G+ + +
Sbjct: 183 LIEEVTEAYKVQFEKDMGVFLKARAEELVPGGLMIT-LGQCLPDGVAMYETWSGIVKDTI 241
Query: 248 GSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLSQPRRRIT- 306
G C D+A +GV +EEK++ FNLP Y EL+ I N FTIE ME +S P +
Sbjct: 242 GDCLQDMATLGVTTEEKIEMFNLPVYFPQVSELKGAIEQNIRFTIEMMEIVSHPLEAVQL 301
Query: 307 ANEYASGI-RAGIDGLIKKHFGDEFVDEIFNYFTTKVEENYSIIEEKIRNVSNLFISLKR 365
+N + + + RA + +I++HFG VDE+F F K+ E + I EK + I LKR
Sbjct: 302 SNNFITSMYRAILSTVIERHFGGSVVDELFRQFAKKLSE-HPIDFEKCKKQMVYHIVLKR 360
|
|
| TAIR|locus:2144461 AT5G38100 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 758 (271.9 bits), Expect = 3.5e-75, P = 3.5e-75
Identities = 165/358 (46%), Positives = 219/358 (61%)
Query: 13 YPMVGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIADLGCS 72
YPM G D +SY +NS+YQ+ + +A E I +KLDL++ T F+IAD GCS
Sbjct: 8 YPMSSGHDQHSYIHNSSYQKAAISSAVEKTRRCIFEKLDLQLSSDFGT---FRIADFGCS 64
Query: 73 VGPNTLLAVQNIIEAIELK-FQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHA-- 129
+GPNT Q+II+ ++ K + +T P LEFQVF ND NDFNTLF++ P +
Sbjct: 65 IGPNTFHVAQSIIDTVKSKRLEESTENSLVP--LEFQVFFNDQPTNDFNTLFRTQPLSPE 122
Query: 130 RKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESN 189
R+YF+ G+PGSF+ R+ PR+SIH HTSY HWLSKVP + D S AWNK IQC+
Sbjct: 123 REYFSVGVPGSFYGRVLPRNSIHIGHTSYTTHWLSKVPDNVCDKKSMAWNKNYIQCNNLL 182
Query: 190 IEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGS 249
EV +AY Q+ DME FL+ARAEELVPGGLM++I +PDG+ L ++ G + +G
Sbjct: 183 EEVTKAYKVQFIKDMEIFLDARAEELVPGGLMIVI-GECLPDGVSLYETWQGYVMDTIGD 241
Query: 250 CFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLSQPRR-RITAN 308
C D+AK G+ SEEK+D F+LP Y EL+ I NG+FTIE ME S P + N
Sbjct: 242 CLMDMAKSGITSEEKIDLFSLPVYFPQFSELKGEIEKNGSFTIELMETTSHPLEGKPLTN 301
Query: 309 EY-ASGIRAGIDGLIKKHFGDEFVDEIFNYFTTKVEENYSIIEEKIRNVSNLFISLKR 365
++ S RA + +I+KHFGD VDE+F Y K N+ I E + I LKR
Sbjct: 302 DFITSTFRAFLTTIIEKHFGDGVVDELF-YRLAKKLSNHPIDFEMRKKQVVYCIVLKR 358
|
|
| TAIR|locus:2082157 AT3G44840 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 747 (268.0 bits), Expect = 5.1e-74, P = 5.1e-74
Identities = 156/338 (46%), Positives = 223/338 (65%)
Query: 9 LTEAYPMVGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIAD 68
++ ++ M+GG+ SY +S YQ G+++AA E I+EAI+ KL++ + L IAD
Sbjct: 1 MSTSFTMIGGEGPESYRQHSKYQGGLLEAATEKINEAISTKLNIDLAS---NL--VNIAD 55
Query: 69 LGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH 128
GCS GPNT AVQ II+A+E K+Q+ NL + +EFQVF ND S+NDFNTLFK+LP
Sbjct: 56 FGCSTGPNTFRAVQTIIDAVEHKYQQENNLEE----IEFQVFFNDSSNNDFNTLFKTLPP 111
Query: 129 ARKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSES 188
ARKYFA G+P SF R+ PRSS+H +SY+LH+LSK+PK+I D S AWNK I C+
Sbjct: 112 ARKYFATGVPASFFGRVLPRSSLHVGVSSYSLHFLSKIPKKIKDCDSHAWNK-DIHCTGF 170
Query: 189 NIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILG 248
+ EVVRAY QYK DMESFL ARA+ELV GGL+ L L + +P+G+ +S + G+ + +G
Sbjct: 171 SKEVVRAYLDQYKIDMESFLTARAQELVSGGLLFL-LGSCLPNGVQMSETLNGMMIDCIG 229
Query: 249 SCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLSQPRRRITAN 308
S ND+AK G++ +EK+D+F LP Y A E++ II N +TIE+ + +SQ I +
Sbjct: 230 SSLNDIAKQGLIDQEKLDTFKLPIYVAYAGEIKQIIEDNVYYTIERFDIISQENEEIPLD 289
Query: 309 -EYAS-GIRAGIDGLIKKHFGDEFVDEIFNYFTTKVEE 344
E+ + + + G++ HFG +++ F TK +E
Sbjct: 290 PEFLTVSFKVTVGGIVASHFGQHVMEKTFEVVKTKTQE 327
|
|
| TAIR|locus:504956193 AT1G15125 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 731 (262.4 bits), Expect = 2.5e-72, P = 2.5e-72
Identities = 156/355 (43%), Positives = 224/355 (63%)
Query: 15 MVGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIADLGCSVG 74
M GGD A SYA NS+YQRG ++AA+ L+ I +LD+ F F IAD GCS G
Sbjct: 1 MNGGDGASSYARNSSYQRGAIEAAEALLRNEINARLDITNHSFSS----FTIADFGCSSG 56
Query: 75 PNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFA 134
PNT++AV II+A+ KF T++L + +FQVF ND S DFN LF LP R YF
Sbjct: 57 PNTVIAVDIIIQALYHKF--TSSLPNTTTP-QFQVFFNDVSHTDFNALFALLPPQRPYFV 113
Query: 135 AGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVR 194
AG+PGSF+ LFP++ ++ ++S AL WLS +P E+ D SPA+N+G I + ++ EV +
Sbjct: 114 AGVPGSFYGNLFPKAHLNLAYSSCALCWLSDLPSELTDTSSPAYNRGRIHYTGASAEVAQ 173
Query: 195 AYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDG-IPLSNSYVGVFNNILGSCFND 253
AYS+QYK D++ FL+AR++EL GLM LI+ V PDG + + G ++LGSC D
Sbjct: 174 AYSSQYKKDIKLFLHARSQELAENGLMALIVPGV-PDGFLDCQEASTGSEFDLLGSCLMD 232
Query: 254 LAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLSQPRRRITANEYASG 313
+AK G++ EE+V+SFNLP Y TPKELE IIR+NG I+KME L + T + S
Sbjct: 233 MAKEGIIEEEEVNSFNLPIYYTTPKELEDIIRSNGELKIDKMETLGSMDAQDTMPDLESR 292
Query: 314 I---RAGIDGLIKKHFGDEFVDEIFNYFTTKVEENYSIIEEKIRNVSNLFISLKR 365
+ RA ++GL++ HFG + +D++F+ + K+ + I++ + +F L R
Sbjct: 293 VLYLRAVLEGLVRTHFGHQILDDLFDRYALKLAHSSFILQPQTHKSIMIFALLSR 347
|
|
| TAIR|locus:2200186 AT1G68040 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 707 (253.9 bits), Expect = 8.9e-70, P = 8.9e-70
Identities = 151/358 (42%), Positives = 208/358 (58%)
Query: 14 PMVGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIADLGCSV 73
PM GGD SY+ NS QR KE I + + +KL+ K L D+ F+IADLGC+
Sbjct: 12 PMSGGDGPNSYSKNSHLQRKTTSLLKEKIDKLVLEKLNAKTLISSDS-NTFRIADLGCAT 70
Query: 74 GPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYF 133
GPNT V NII++IE +++ + KP EF VF ND NDFNTLF SLP R Y
Sbjct: 71 GPNTFFLVDNIIKSIETSLRKSNS--SKP---EFLVFFNDLPQNDFNTLFTSLPQDRSYL 125
Query: 134 AAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVV 193
A G+PGSF+ R+ P+SS+H V T A HWLS VPKE++D S AWNKG + S + EVV
Sbjct: 126 AVGVPGSFYGRVLPQSSVHIVVTMGATHWLSSVPKEVLDKSSKAWNKGKVHYSNAADEVV 185
Query: 194 RAYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFND 253
+AY Q+ DME FL ARA E+V GGL+V+ + + P G+P SN + +
Sbjct: 186 KAYRDQFGRDMEKFLEARATEIVSGGLLVVGMCGI-PKGMPFSNLADSIMYTSMADVLTQ 244
Query: 254 LAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEK------LSQPRRRITA 307
+ G++SEE+VD+FN+P Y+ATP+E+ ++ NG FT+E ME L +P
Sbjct: 245 MHSEGLISEEQVDTFNIPIYSATPEEVTVLVVKNGCFTVESMELMDPTAWLKRPTNVEDV 304
Query: 308 NEYASGIRAGIDGLIKKHFGDEFVDEIFNYFTTKVEENYSIIEEKIRNVSNLFISLKR 365
+ I+A + L HFG+ +D++F+ T K+ IE R LF +L+R
Sbjct: 305 RHWMVCIKATMGSLFINHFGEHLLDDVFDRLTAKLVGLTEKIESSYREKVMLFFALQR 362
|
|
| TAIR|locus:2082117 AT3G44870 "AT3G44870" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 694 (249.4 bits), Expect = 2.1e-68, P = 2.1e-68
Identities = 144/338 (42%), Positives = 216/338 (63%)
Query: 9 LTEAYPMVGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIAD 68
++ ++ M+GG+ SY ++S YQ +V+AAKE I+EAI+ KLD+ D T IAD
Sbjct: 1 MSTSFTMIGGEGPNSYRDHSKYQGALVEAAKEKINEAISTKLDI-----DFTSNLVNIAD 55
Query: 69 LGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH 128
GCS GPNT AVQ +I+A+E K+++ +N+ EFQVF ND S+NDFNTLFK+LP
Sbjct: 56 FGCSSGPNTFTAVQTLIDAVENKYKKESNI-------EFQVFFNDSSNNDFNTLFKTLPP 108
Query: 129 ARKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSES 188
AR YFA+G+PGSF R+ PR+S+H ++Y+LH++SK+PKE+ D SP WNK I CS S
Sbjct: 109 ARLYFASGVPGSFFGRVLPRNSLHLGVSAYSLHFISKIPKEVKDRDSPVWNK-DIHCSGS 167
Query: 189 NIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILG 248
+ EV + Y QYK D+ SFLNARA+ELV GGL+ L+L + P+G+ + + G+ + +G
Sbjct: 168 SKEVAKLYLGQYKIDVGSFLNARAQELVSGGLL-LLLGSCRPNGVQMFETVEGMMIDFIG 226
Query: 249 SCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLSQPRRRITAN 308
+ N++A G++ ++K+D+F LP Y EL+ II NG FTIE E + + +
Sbjct: 227 ASLNEIANQGLIDQQKLDTFKLPIYAPQADELKQIIEDNGCFTIEVFENIIHAKGEYPLD 286
Query: 309 -EYAS-GIRAGIDGLIKKHFGDEFVDEIFNYFTTKVEE 344
E+ + + + G + FG + +++ F K +E
Sbjct: 287 PEFLTVSFKVTVGGSVASLFGQDGMEKTFELVKEKTQE 324
|
|
| TAIR|locus:2082112 FAMT "farnesoic acid carboxyl-O-methyltransferase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 694 (249.4 bits), Expect = 2.1e-68, P = 2.1e-68
Identities = 148/338 (43%), Positives = 214/338 (63%)
Query: 9 LTEAYPMVGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIAD 68
++ ++ M+GG+ SY +S YQ +V AAKE I+EAI+ KLD+ D T IAD
Sbjct: 1 MSTSFTMIGGEGPNSYREHSKYQGALVIAAKEKINEAISTKLDI-----DFTSNLVNIAD 55
Query: 69 LGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH 128
GCS GPNT AVQ +I+A+E K+++ +N+ +EFQVF ND S+NDFNTLFK+LP
Sbjct: 56 FGCSSGPNTFTAVQTLIDAVENKYKKESNIE----GIEFQVFFNDSSNNDFNTLFKTLPP 111
Query: 129 ARKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSES 188
AR YFA+G+PGSF R+ P++S+H +SY+LH++SKVPKEI D S WNK I CS S
Sbjct: 112 ARLYFASGVPGSFFGRVLPKNSLHVGVSSYSLHFVSKVPKEIKDRDSLVWNK-DIHCSGS 170
Query: 189 NIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILG 248
+ EVV+ Y QYK D+ SFL ARA+ELV GGL+ L+L + P G+ + + G+ + +G
Sbjct: 171 SKEVVKLYLGQYKIDVGSFLTARAQELVSGGLL-LLLGSCRPTGVQMFETVEGMMIDFIG 229
Query: 249 SCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLSQPRRRITAN 308
S N++A G++ ++K+D+F LP Y EL+ II N FTIE EK+S + +
Sbjct: 230 SSLNEIANQGLIDQQKLDTFKLPIYAPNVDELKQIIEDNKCFTIEAFEKISHAKGEYPLD 289
Query: 309 -EY-ASGIRAGIDGLIKKHFGDEFVDEIFNYFTTKVEE 344
EY S + + G + FG + +++ + K +E
Sbjct: 290 PEYLTSAFKVTVGGSVASLFGQDGMEKTYELVKEKTQE 327
|
|
| TAIR|locus:2033389 AT1G66720 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
Identities = 145/357 (40%), Positives = 214/357 (59%)
Query: 10 TEAYPMVGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIADL 69
T + MVGG+ SY +S+YQR ++ AAK+ I+ I+ L L ++ F +AD
Sbjct: 4 TPEWVMVGGEGPESYKQHSSYQRDLLKAAKDKINAVISTNLSLNLIS-----NRFSVADF 58
Query: 70 GCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSA-LEFQVFLNDHSDNDFNTLFKSLPH 128
GC+ GPNT +AVQNII+A+E K+ R T Q P +EFQV ND S+NDFNTLF+ LP
Sbjct: 59 GCASGPNTFVAVQNIIDAVEEKYLRETG--QNPDDNIEFQVLFNDLSNNDFNTLFQGLPS 116
Query: 129 ARKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSES 188
R+Y++A +PGSF R+ P+ SIH +YA + SK+PK I D SP WN+ + C+
Sbjct: 117 GRRYYSAAIPGSFFDRVLPKHSIHIGVMNYAFQFTSKIPKGISDRNSPLWNR-DMHCTGF 175
Query: 189 NIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILG 248
N +V +AY Q+ D ++ L+ARAEELVP GLM L+L + + DGI +S +Y G+ +++G
Sbjct: 176 NNKVKKAYLDQFSLDSKNILDARAEELVPEGLM-LLLGSCLRDGIKMSETYRGIVLDLIG 234
Query: 249 SCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLSQPR-RRITA 307
+ NDLA+ GV+ ++KV+SFN+ Y A EL II NG FTIE E + QP +
Sbjct: 235 ASLNDLAQQGVIEKDKVESFNITLYIAEEGELRQIIEENGKFTIEAFEDIIQPNGESLDP 294
Query: 308 NEYASGIRAGIDGLIKKHFGDEFVDEIFNYFTTKVEENYSIIEEKIRNVSNLFISLK 364
A +++ G++ HFG E + + F K + +S ++ + L + K
Sbjct: 295 KILAVSLKSAFGGILSAHFGAEAMMKAFELVEAKAHQEFSRLQNAKPTMQYLIVLRK 351
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| TAIR|locus:2033409 PXMT1 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 674 (242.3 bits), Expect = 2.8e-66, P = 2.8e-66
Identities = 149/358 (41%), Positives = 207/358 (57%)
Query: 10 TEAYPMVGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIADL 69
T + M+GGD SY S+YQR +++A K+ +++AI+ LDL ++ F +AD
Sbjct: 4 TPDWIMIGGDGPESYNQQSSYQRALLEATKDKMTKAISANLDLDLIS-----NRFIVADF 58
Query: 70 GCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSA-LEFQVFLNDHSDNDFNTLFKSLPH 128
GC+ GPNT +AVQNII+A+E K++R T Q P+ +EFQV ND S NDFNTLF++LP
Sbjct: 59 GCASGPNTFVAVQNIIDAVEEKYRRETG--QNPADNIEFQVLFNDFSLNDFNTLFQTLPP 116
Query: 129 ARKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSES 188
R+YF+AG+PGSF R+ P+ S H SYA H+ SK+PK I+D SP WNK +QC+
Sbjct: 117 GRRYFSAGVPGSFFERVLPKESFHIGVMSYAFHFTSKIPKGIMDRDSPLWNK-DMQCTGF 175
Query: 189 NIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILG 248
N V +AY QY D + L+ARAEELVPGGLM L+L + + DG+ +S + G + +G
Sbjct: 176 NPAVKKAYLDQYSIDTKILLDARAEELVPGGLM-LLLGSCLRDGVKMSETPKGTVMDFIG 234
Query: 249 SCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLSQPRRRITAN 308
+DLAK GV +EKVD+F Y A E+ II NG FTIE E + + +
Sbjct: 235 ESLSDLAKQGVTEQEKVDTFRTSIYFAEQGEIRQIIEENGKFTIEAFEDIIHAKNEFPFD 294
Query: 309 E--YASGIRAGIDGLIKKHFGDEFVDEIFNYFTTKVEENYSIIEEKIRNVSNLFISLK 364
A +A I HFG E + + F K E S + + L + K
Sbjct: 295 PKTLAISFKAFYGAFISAHFGVEVMRKAFELVEVKAREQISRLHNSKPGMQYLIVLRK 352
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| TAIR|locus:2033414 AT1G66690 "AT1G66690" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 664 (238.8 bits), Expect = 3.2e-65, P = 3.2e-65
Identities = 146/358 (40%), Positives = 210/358 (58%)
Query: 10 TEAYPMVGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIADL 69
T+ + M+GG SY S+YQR +++AAK+ ++EAI+ LDL ++ F +AD
Sbjct: 4 TQDWIMIGGYGPESYNQQSSYQRALLEAAKDKMTEAISANLDLDLIS-----NRFIVADF 58
Query: 70 GCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHA 129
GC+ GPNT +AVQNII+A+E K+ R T + + + +EFQV ND NDFNTLF++LP
Sbjct: 59 GCASGPNTFVAVQNIIDAVEEKYLRETGQNPEDN-IEFQVLFNDLRINDFNTLFQTLPPG 117
Query: 130 RKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESN 189
R+YF+AG+PGSF +R+ P+ S H SYA + SK+PK I+D SP WNK +QC+ N
Sbjct: 118 RRYFSAGVPGSFFNRVLPKQSFHIAVMSYAFLFTSKIPKGIMDRDSPLWNK-DMQCTGFN 176
Query: 190 IEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGS 249
V +AY QY D ++ L+ARAEEL+PGGLM L+L + + DG+ +S + G + +G
Sbjct: 177 PAVKKAYLEQYSIDTKNLLDARAEELMPGGLM-LLLGSCMRDGVKMSETLKGTVMDFIGE 235
Query: 250 CFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLSQPRRR--ITA 307
NDLA+ GV +EKVD+F Y A E+ II NG FTIE E + + +
Sbjct: 236 SLNDLAQKGVTEQEKVDTFKTSIYFAEQGEIRQIIEENGKFTIEAFEDIIHSKNEFPLDP 295
Query: 308 NEYASGIRAGIDGLIKKHFGDEFVDEIFNYFTTKVEENYSIIEEKIRNVSNLFISLKR 365
A +A I HFG E + + F K E S + K++ I L++
Sbjct: 296 KTLAISFKALYGAFISAHFGIEVMRKAFELVEVKAREQISRLH-KVKPGMQYLIVLRK 352
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9FKR0 | MT878_ARATH | 2, ., 1, ., 1, ., - | 0.4472 | 0.9591 | 0.9750 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 2.1.1.141 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | gw1.II.388.1 | hypothetical protein (327 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 367 | |||
| pfam03492 | 331 | pfam03492, Methyltransf_7, SAM dependent carboxyl | 1e-130 | |
| PLN02668 | 386 | PLN02668, PLN02668, indole-3-acetate carboxyl meth | 5e-60 |
| >gnl|CDD|217591 pfam03492, Methyltransf_7, SAM dependent carboxyl methyltransferase | Back alignment and domain information |
|---|
Score = 376 bits (967), Expect = e-130
Identities = 148/335 (44%), Positives = 208/335 (62%), Gaps = 23/335 (6%)
Query: 48 DKLDLKILGFDDTLKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEF 107
++ ++L + KIADLGCS GPNT LAV NII+ +E K+Q+ N+ + P EF
Sbjct: 2 EEAISELLLRNLFPNSIKIADLGCSSGPNTFLAVSNIIDTVEKKYQKE-NILEPP---EF 57
Query: 108 QVFLNDHSDNDFNTLFKSLPHA----RKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWL 163
QVF ND NDFNTLFK LP R YF +G+PGSF+ RLFPR+S+HFVH+SY+LHWL
Sbjct: 58 QVFFNDLPSNDFNTLFKLLPPFQKKKRSYFVSGVPGSFYGRLFPRNSLHFVHSSYSLHWL 117
Query: 164 SKVPKEIVDPCSPAWNKGSIQCS-ESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMV 222
S+VPK + D SPAWNKG+I S S EV +AY Q+K D FL ARAEELV GGLMV
Sbjct: 118 SQVPKGLEDKESPAWNKGNIYISGASPEEVYKAYLDQFKKDFSLFLRARAEELVSGGLMV 177
Query: 223 LILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEA 282
L + S + G+F ++LG NDL G++ EEK+DSFN+P Y +P+E++
Sbjct: 178 LTFLGR--PSVDPSETECGIFWDLLGDALNDLVSEGLIEEEKLDSFNIPIYAPSPEEVKE 235
Query: 283 IIRTNGNFTIEKMEKLSQPRRRITANEY------------ASGIRAGIDGLIKKHFGDEF 330
II G+FTIE++E + P + +E AS +RA ++ ++ HFG++
Sbjct: 236 IIEKEGSFTIERLEIIKHPNGEVPWDESDSEDKVEDGRFVASSVRAVVEPMLVAHFGEDI 295
Query: 331 VDEIFNYFTTKVEENYSIIEEKIRNVSNLFISLKR 365
+D++F+ + K+ E+ S + + N+ +SL R
Sbjct: 296 MDKLFDRYAKKLSEHLSKELQNAKKTINVVVSLSR 330
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This family of plant methyltransferases contains enzymes that act on a variety of substrates including salicylic acid, jasmonic acid and 7-Methylxanthine. Caffeine is synthesised through sequential three-step methylation of xanthine derivatives at positions 7-N, 3-N, and 1-N. The protein 7-methylxanthine methyltransferase (designated as CaMXMT) catalyzes the second step to produce theobromine. Length = 331 |
| >gnl|CDD|178273 PLN02668, PLN02668, indole-3-acetate carboxyl methyltransferase | Back alignment and domain information |
|---|
Score = 198 bits (504), Expect = 5e-60
Identities = 117/348 (33%), Positives = 173/348 (49%), Gaps = 39/348 (11%)
Query: 15 MVGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIADLGCSVG 74
M GG SYANNS Q + L+ E + D + L PF DLGCS G
Sbjct: 21 MKGGKGEGSYANNSQAQALHARSMLHLLEETL-DNVHLN----SSPEVPFTAVDLGCSSG 75
Query: 75 PNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP------- 127
NT+ + I++ + +++ P EF F +D NDFNTLF+ LP
Sbjct: 76 SNTIHIIDVIVKHMSKRYESAG---LDPP--EFSAFFSDLPSNDFNTLFQLLPPLANYGG 130
Query: 128 ---------HARKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAW 178
R YFAAG+PGSF+ RLFP SI H++++LHWLS+VP+ + D S A+
Sbjct: 131 SMEECLAASGHRSYFAAGVPGSFYRRLFPARSIDVFHSAFSLHWLSQVPESVTDKRSAAY 190
Query: 179 NKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLI-LAAVVPDGIPLSN 237
NKG + ++ AY Q++ D+ FL ARA+E+ GG M L+ L D P
Sbjct: 191 NKGRVFIHGASESTANAYKRQFQADLAGFLRARAQEMKRGGAMFLVCLGRTSVD--PTDQ 248
Query: 238 SYVG-VFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKME 296
G +F ++DL + G+++ EK DSFN+P Y + ++ + ++ NG+F I+K+E
Sbjct: 249 GGAGLLFGTHFQDAWDDLVQEGLVTSEKRDSFNIPVYAPSLQDFKEVVEANGSFAIDKLE 308
Query: 297 --KLSQP---RRRITANE----YASGIRAGIDGLIKKHFGDEFVDEIF 335
K P A E A+ R+ L+ H G+E +E+F
Sbjct: 309 VFKGGSPLVVNEPDDAAEVGRAMANSCRSVAGVLVDAHIGEELSNELF 356
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Length = 386 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 367 | |||
| PLN02668 | 386 | indole-3-acetate carboxyl methyltransferase | 100.0 | |
| PF03492 | 334 | Methyltransf_7: SAM dependent carboxyl methyltrans | 100.0 | |
| PRK14103 | 255 | trans-aconitate 2-methyltransferase; Provisional | 99.63 | |
| PRK01683 | 258 | trans-aconitate 2-methyltransferase; Provisional | 99.62 | |
| PRK10258 | 251 | biotin biosynthesis protein BioC; Provisional | 99.58 | |
| TIGR02072 | 240 | BioC biotin biosynthesis protein BioC. This enzyme | 99.53 | |
| COG4106 | 257 | Tam Trans-aconitate methyltransferase [General fun | 99.33 | |
| PLN02233 | 261 | ubiquinone biosynthesis methyltransferase | 99.05 | |
| PF13489 | 161 | Methyltransf_23: Methyltransferase domain; PDB: 3J | 99.05 | |
| PTZ00098 | 263 | phosphoethanolamine N-methyltransferase; Provision | 99.04 | |
| TIGR02752 | 231 | MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone me | 99.03 | |
| PRK08317 | 241 | hypothetical protein; Provisional | 98.99 | |
| PLN02244 | 340 | tocopherol O-methyltransferase | 98.99 | |
| PRK15068 | 322 | tRNA mo(5)U34 methyltransferase; Provisional | 98.97 | |
| PLN02336 | 475 | phosphoethanolamine N-methyltransferase | 98.91 | |
| TIGR00740 | 239 | methyltransferase, putative. A simple BLAST search | 98.9 | |
| COG2226 | 238 | UbiE Methylase involved in ubiquinone/menaquinone | 98.84 | |
| TIGR00452 | 314 | methyltransferase, putative. Known examples to dat | 98.83 | |
| PF01209 | 233 | Ubie_methyltran: ubiE/COQ5 methyltransferase famil | 98.81 | |
| PRK11036 | 255 | putative S-adenosyl-L-methionine-dependent methylt | 98.79 | |
| PRK11207 | 197 | tellurite resistance protein TehB; Provisional | 98.79 | |
| smart00828 | 224 | PKS_MT Methyltransferase in polyketide synthase (P | 98.78 | |
| PRK11705 | 383 | cyclopropane fatty acyl phospholipid synthase; Pro | 98.76 | |
| PF08241 | 95 | Methyltransf_11: Methyltransferase domain; InterPr | 98.73 | |
| PRK15451 | 247 | tRNA cmo(5)U34 methyltransferase; Provisional | 98.72 | |
| PLN02396 | 322 | hexaprenyldihydroxybenzoate methyltransferase | 98.71 | |
| PRK00216 | 239 | ubiE ubiquinone/menaquinone biosynthesis methyltra | 98.7 | |
| KOG2940 | 325 | consensus Predicted methyltransferase [General fun | 98.69 | |
| PLN02490 | 340 | MPBQ/MSBQ methyltransferase | 98.69 | |
| TIGR01934 | 223 | MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis | 98.69 | |
| TIGR00477 | 195 | tehB tellurite resistance protein TehB. Part of a | 98.63 | |
| PRK11873 | 272 | arsM arsenite S-adenosylmethyltransferase; Reviewe | 98.59 | |
| PF12847 | 112 | Methyltransf_18: Methyltransferase domain; PDB: 3G | 98.57 | |
| PF03848 | 192 | TehB: Tellurite resistance protein TehB; InterPro: | 98.56 | |
| PF13847 | 152 | Methyltransf_31: Methyltransferase domain; PDB: 3T | 98.55 | |
| PRK12335 | 287 | tellurite resistance protein TehB; Provisional | 98.54 | |
| PRK06202 | 232 | hypothetical protein; Provisional | 98.53 | |
| PF08242 | 99 | Methyltransf_12: Methyltransferase domain; InterPr | 98.52 | |
| PF02353 | 273 | CMAS: Mycolic acid cyclopropane synthetase; InterP | 98.47 | |
| TIGR02716 | 306 | C20_methyl_CrtF C-20 methyltransferase BchU. Membe | 98.4 | |
| COG2230 | 283 | Cfa Cyclopropane fatty acid synthase and related m | 98.39 | |
| PRK00121 | 202 | trmB tRNA (guanine-N(7)-)-methyltransferase; Revie | 98.38 | |
| KOG1541 | 270 | consensus Predicted protein carboxyl methylase [Ge | 98.37 | |
| PRK11088 | 272 | rrmA 23S rRNA methyltransferase A; Provisional | 98.35 | |
| TIGR01983 | 224 | UbiG ubiquinone biosynthesis O-methyltransferase. | 98.35 | |
| PLN02336 | 475 | phosphoethanolamine N-methyltransferase | 98.27 | |
| TIGR02081 | 194 | metW methionine biosynthesis protein MetW. This pr | 98.27 | |
| TIGR02021 | 219 | BchM-ChlM magnesium protoporphyrin O-methyltransfe | 98.27 | |
| PRK05785 | 226 | hypothetical protein; Provisional | 98.27 | |
| PRK06922 | 677 | hypothetical protein; Provisional | 98.26 | |
| KOG1270 | 282 | consensus Methyltransferases [Coenzyme transport a | 98.24 | |
| KOG3010 | 261 | consensus Methyltransferase [General function pred | 98.19 | |
| PRK05134 | 233 | bifunctional 3-demethylubiquinone-9 3-methyltransf | 98.18 | |
| PF00891 | 241 | Methyltransf_2: O-methyltransferase; InterPro: IPR | 98.17 | |
| PF05401 | 201 | NodS: Nodulation protein S (NodS); InterPro: IPR00 | 98.15 | |
| TIGR00138 | 181 | gidB 16S rRNA methyltransferase GidB. GidB (glucos | 98.13 | |
| TIGR03840 | 213 | TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d | 98.12 | |
| PF08003 | 315 | Methyltransf_9: Protein of unknown function (DUF16 | 98.1 | |
| PRK07580 | 230 | Mg-protoporphyrin IX methyl transferase; Validated | 98.09 | |
| KOG2361 | 264 | consensus Predicted methyltransferase [General fun | 98.08 | |
| TIGR03438 | 301 | probable methyltransferase. This model represents | 98.08 | |
| smart00138 | 264 | MeTrc Methyltransferase, chemotaxis proteins. Meth | 98.07 | |
| PRK11188 | 209 | rrmJ 23S rRNA methyltransferase J; Provisional | 98.07 | |
| TIGR00537 | 179 | hemK_rel_arch HemK-related putative methylase. The | 98.04 | |
| TIGR00091 | 194 | tRNA (guanine-N(7)-)-methyltransferase. In E. coli | 98.01 | |
| TIGR03587 | 204 | Pse_Me-ase pseudaminic acid biosynthesis-associate | 97.98 | |
| COG4123 | 248 | Predicted O-methyltransferase [General function pr | 97.97 | |
| PRK08287 | 187 | cobalt-precorrin-6Y C(15)-methyltransferase; Valid | 97.92 | |
| PRK13255 | 218 | thiopurine S-methyltransferase; Reviewed | 97.91 | |
| PF13649 | 101 | Methyltransf_25: Methyltransferase domain; PDB: 3B | 97.9 | |
| PF05175 | 170 | MTS: Methyltransferase small domain; InterPro: IPR | 97.87 | |
| PF06080 | 204 | DUF938: Protein of unknown function (DUF938); Inte | 97.87 | |
| KOG1540 | 296 | consensus Ubiquinone biosynthesis methyltransferas | 97.87 | |
| PLN02585 | 315 | magnesium protoporphyrin IX methyltransferase | 97.85 | |
| PTZ00146 | 293 | fibrillarin; Provisional | 97.85 | |
| PHA03411 | 279 | putative methyltransferase; Provisional | 97.83 | |
| PRK09489 | 342 | rsmC 16S ribosomal RNA m2G1207 methyltransferase; | 97.82 | |
| PRK15001 | 378 | SAM-dependent 23S ribosomal RNA mG1835 methyltrans | 97.82 | |
| TIGR02469 | 124 | CbiT precorrin-6Y C5,15-methyltransferase (decarbo | 97.81 | |
| cd02440 | 107 | AdoMet_MTases S-adenosylmethionine-dependent methy | 97.8 | |
| PRK04266 | 226 | fibrillarin; Provisional | 97.8 | |
| PRK00107 | 187 | gidB 16S rRNA methyltransferase GidB; Reviewed | 97.73 | |
| PF05891 | 218 | Methyltransf_PK: AdoMet dependent proline di-methy | 97.73 | |
| TIGR00438 | 188 | rrmJ cell division protein FtsJ. | 97.69 | |
| PLN02232 | 160 | ubiquinone biosynthesis methyltransferase | 97.66 | |
| PRK13944 | 205 | protein-L-isoaspartate O-methyltransferase; Provis | 97.63 | |
| TIGR00080 | 215 | pimt protein-L-isoaspartate(D-aspartate) O-methylt | 97.62 | |
| PRK13942 | 212 | protein-L-isoaspartate O-methyltransferase; Provis | 97.59 | |
| PRK14121 | 390 | tRNA (guanine-N(7)-)-methyltransferase; Provisiona | 97.55 | |
| PRK00312 | 212 | pcm protein-L-isoaspartate O-methyltransferase; Re | 97.53 | |
| TIGR03534 | 251 | RF_mod_PrmC protein-(glutamine-N5) methyltransfera | 97.49 | |
| TIGR03533 | 284 | L3_gln_methyl protein-(glutamine-N5) methyltransfe | 97.45 | |
| COG2227 | 243 | UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- | 97.44 | |
| PRK14967 | 223 | putative methyltransferase; Provisional | 97.44 | |
| COG2242 | 187 | CobL Precorrin-6B methylase 2 [Coenzyme metabolism | 97.42 | |
| PF13659 | 117 | Methyltransf_26: Methyltransferase domain; PDB: 3G | 97.42 | |
| PF05148 | 219 | Methyltransf_8: Hypothetical methyltransferase; In | 97.41 | |
| PF07021 | 193 | MetW: Methionine biosynthesis protein MetW; InterP | 97.38 | |
| PRK00517 | 250 | prmA ribosomal protein L11 methyltransferase; Revi | 97.36 | |
| PF03291 | 331 | Pox_MCEL: mRNA capping enzyme; InterPro: IPR004971 | 97.27 | |
| TIGR00406 | 288 | prmA ribosomal protein L11 methyltransferase. Ribo | 97.26 | |
| PRK11805 | 307 | N5-glutamine S-adenosyl-L-methionine-dependent met | 97.24 | |
| KOG3178 | 342 | consensus Hydroxyindole-O-methyltransferase and re | 97.19 | |
| TIGR00536 | 284 | hemK_fam HemK family putative methylases. The gene | 97.18 | |
| TIGR03704 | 251 | PrmC_rel_meth putative protein-(glutamine-N5) meth | 97.14 | |
| PRK14968 | 188 | putative methyltransferase; Provisional | 97.1 | |
| PRK00377 | 198 | cbiT cobalt-precorrin-6Y C(15)-methyltransferase; | 97.09 | |
| PRK00811 | 283 | spermidine synthase; Provisional | 97.04 | |
| PRK14903 | 431 | 16S rRNA methyltransferase B; Provisional | 97.03 | |
| PRK09328 | 275 | N5-glutamine S-adenosyl-L-methionine-dependent met | 97.03 | |
| PLN03075 | 296 | nicotianamine synthase; Provisional | 96.94 | |
| PRK10901 | 427 | 16S rRNA methyltransferase B; Provisional | 96.92 | |
| PF03141 | 506 | Methyltransf_29: Putative S-adenosyl-L-methionine- | 96.89 | |
| TIGR00563 | 426 | rsmB ribosomal RNA small subunit methyltransferase | 96.88 | |
| PRK14904 | 445 | 16S rRNA methyltransferase B; Provisional | 96.88 | |
| PRK14966 | 423 | unknown domain/N5-glutamine S-adenosyl-L-methionin | 96.82 | |
| KOG2899 | 288 | consensus Predicted methyltransferase [General fun | 96.78 | |
| PRK01544 | 506 | bifunctional N5-glutamine S-adenosyl-L-methionine- | 96.76 | |
| PRK07402 | 196 | precorrin-6B methylase; Provisional | 96.67 | |
| PRK14902 | 444 | 16S rRNA methyltransferase B; Provisional | 96.66 | |
| COG2518 | 209 | Pcm Protein-L-isoaspartate carboxylmethyltransfera | 96.61 | |
| COG2264 | 300 | PrmA Ribosomal protein L11 methylase [Translation, | 96.6 | |
| PRK14901 | 434 | 16S rRNA methyltransferase B; Provisional | 96.57 | |
| KOG3045 | 325 | consensus Predicted RNA methylase involved in rRNA | 96.51 | |
| COG2890 | 280 | HemK Methylase of polypeptide chain release factor | 96.45 | |
| PF02390 | 195 | Methyltransf_4: Putative methyltransferase ; Inter | 96.44 | |
| COG2813 | 300 | RsmC 16S RNA G1207 methylase RsmC [Translation, ri | 96.44 | |
| PF01135 | 209 | PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl | 96.37 | |
| TIGR00446 | 264 | nop2p NOL1/NOP2/sun family putative RNA methylase. | 96.35 | |
| KOG1975 | 389 | consensus mRNA cap methyltransferase [RNA processi | 96.34 | |
| KOG2904 | 328 | consensus Predicted methyltransferase [General fun | 96.34 | |
| KOG4300 | 252 | consensus Predicted methyltransferase [General fun | 96.32 | |
| PRK04457 | 262 | spermidine synthase; Provisional | 96.3 | |
| TIGR00417 | 270 | speE spermidine synthase. the SpeE subunit of sper | 96.23 | |
| PRK03612 | 521 | spermidine synthase; Provisional | 96.23 | |
| TIGR01177 | 329 | conserved hypothetical protein TIGR01177. This fam | 96.15 | |
| PRK13943 | 322 | protein-L-isoaspartate O-methyltransferase; Provis | 96.1 | |
| PRK01581 | 374 | speE spermidine synthase; Validated | 96.06 | |
| smart00650 | 169 | rADc Ribosomal RNA adenine dimethylases. | 96.04 | |
| PF05185 | 448 | PRMT5: PRMT5 arginine-N-methyltransferase; InterPr | 95.92 | |
| PLN02672 | 1082 | methionine S-methyltransferase | 95.91 | |
| PRK13256 | 226 | thiopurine S-methyltransferase; Reviewed | 95.76 | |
| PF12147 | 311 | Methyltransf_20: Putative methyltransferase; Inter | 95.68 | |
| PF10294 | 173 | Methyltransf_16: Putative methyltransferase; Inter | 95.6 | |
| PF06325 | 295 | PrmA: Ribosomal protein L11 methyltransferase (Prm | 95.57 | |
| KOG1499 | 346 | consensus Protein arginine N-methyltransferase PRM | 95.56 | |
| PLN02366 | 308 | spermidine synthase | 95.48 | |
| COG4976 | 287 | Predicted methyltransferase (contains TPR repeat) | 95.26 | |
| COG0220 | 227 | Predicted S-adenosylmethionine-dependent methyltra | 95.22 | |
| PRK01544 | 506 | bifunctional N5-glutamine S-adenosyl-L-methionine- | 95.15 | |
| PRK10611 | 287 | chemotaxis methyltransferase CheR; Provisional | 95.0 | |
| PHA03412 | 241 | putative methyltransferase; Provisional | 94.95 | |
| PF01739 | 196 | CheR: CheR methyltransferase, SAM binding domain; | 94.91 | |
| PF05724 | 218 | TPMT: Thiopurine S-methyltransferase (TPMT); Inter | 94.84 | |
| PLN02781 | 234 | Probable caffeoyl-CoA O-methyltransferase | 94.59 | |
| PRK11783 | 702 | rlmL 23S rRNA m(2)G2445 methyltransferase; Provisi | 94.54 | |
| PF01234 | 256 | NNMT_PNMT_TEMT: NNMT/PNMT/TEMT family; InterPro: I | 94.47 | |
| COG1352 | 268 | CheR Methylase of chemotaxis methyl-accepting prot | 94.25 | |
| KOG1331 | 293 | consensus Predicted methyltransferase [General fun | 94.21 | |
| PRK10909 | 199 | rsmD 16S rRNA m(2)G966-methyltransferase; Provisio | 94.12 | |
| COG2519 | 256 | GCD14 tRNA(1-methyladenosine) methyltransferase an | 94.05 | |
| PRK15128 | 396 | 23S rRNA m(5)C1962 methyltransferase; Provisional | 93.94 | |
| KOG3191 | 209 | consensus Predicted N6-DNA-methyltransferase [Tran | 93.83 | |
| KOG1500 | 517 | consensus Protein arginine N-methyltransferase CAR | 93.69 | |
| PF01728 | 181 | FtsJ: FtsJ-like methyltransferase; InterPro: IPR00 | 93.11 | |
| TIGR03439 | 319 | methyl_EasF probable methyltransferase domain, Eas | 92.88 | |
| KOG1271 | 227 | consensus Methyltransferases [General function pre | 92.4 | |
| PRK13168 | 443 | rumA 23S rRNA m(5)U1939 methyltransferase; Reviewe | 92.29 | |
| PF06859 | 110 | Bin3: Bicoid-interacting protein 3 (Bin3); InterPr | 92.24 | |
| PF04672 | 267 | Methyltransf_19: S-adenosyl methyltransferase; Int | 91.52 | |
| PF08123 | 205 | DOT1: Histone methylation protein DOT1 ; InterPro: | 91.37 | |
| PF11968 | 219 | DUF3321: Putative methyltransferase (DUF3321); Int | 90.49 | |
| PRK00274 | 272 | ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1 | 90.43 | |
| PRK11933 | 470 | yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF; | 90.34 | |
| TIGR02987 | 524 | met_A_Alw26 type II restriction m6 adenine DNA met | 89.68 | |
| PF05219 | 265 | DREV: DREV methyltransferase; InterPro: IPR007884 | 89.18 | |
| PRK14896 | 258 | ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1 | 88.89 | |
| PF07942 | 270 | N2227: N2227-like protein; InterPro: IPR012901 Thi | 88.69 | |
| PLN02823 | 336 | spermine synthase | 88.62 | |
| PF01596 | 205 | Methyltransf_3: O-methyltransferase; InterPro: IPR | 88.3 | |
| PF13679 | 141 | Methyltransf_32: Methyltransferase domain | 88.28 | |
| PLN02589 | 247 | caffeoyl-CoA O-methyltransferase | 88.23 | |
| COG2263 | 198 | Predicted RNA methylase [Translation, ribosomal st | 88.2 | |
| PF08704 | 247 | GCD14: tRNA methyltransferase complex GCD14 subuni | 88.15 | |
| TIGR00755 | 253 | ksgA dimethyladenosine transferase. Alternate name | 87.8 | |
| COG4122 | 219 | Predicted O-methyltransferase [General function pr | 87.7 | |
| COG0030 | 259 | KsgA Dimethyladenosine transferase (rRNA methylati | 87.22 | |
| PRK04338 | 382 | N(2),N(2)-dimethylguanosine tRNA methyltransferase | 87.14 | |
| PLN02476 | 278 | O-methyltransferase | 86.91 | |
| PTZ00338 | 294 | dimethyladenosine transferase-like protein; Provis | 86.82 | |
| PRK11727 | 321 | 23S rRNA mA1618 methyltransferase; Provisional | 86.54 | |
| PF09243 | 274 | Rsm22: Mitochondrial small ribosomal subunit Rsm22 | 86.39 | |
| COG0500 | 257 | SmtA SAM-dependent methyltransferases [Secondary m | 85.98 | |
| PRK03522 | 315 | rumB 23S rRNA methyluridine methyltransferase; Rev | 85.81 | |
| TIGR00478 | 228 | tly hemolysin TlyA family protein. Hemolysins are | 84.99 | |
| PF02384 | 311 | N6_Mtase: N-6 DNA Methylase; InterPro: IPR003356 T | 81.62 | |
| COG3963 | 194 | Phospholipid N-methyltransferase [Lipid metabolism | 81.55 | |
| PRK11524 | 284 | putative methyltransferase; Provisional | 81.07 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 80.72 |
| >PLN02668 indole-3-acetate carboxyl methyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-92 Score=693.15 Aligned_cols=348 Identities=32% Similarity=0.557 Sum_probs=311.5
Q ss_pred ccCCccceecccCCCCCchHHHhhHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCceEEeeecCCCCcccHHHHHHH
Q 017702 5 ESNNLTEAYPMVGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIADLGCSVGPNTLLAVQNI 84 (367)
Q Consensus 5 ~~~~~~~~~~M~gg~g~~sY~~nS~~Q~~~~~~~~~ll~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~nT~~~~~~i 84 (367)
.+|++++++||+||+|++||++||.+|+.++..++|+|+++|++.. .... +.++++|||||||+|+||+.+++.|
T Consensus 11 ~~m~~~~~l~M~gG~g~~SYa~nS~~Q~~~~~~~k~~leeai~~~~-~~~~----p~~~~~iaDlGcs~G~ntl~~vs~i 85 (386)
T PLN02668 11 SNMKLEKLLCMKGGKGEGSYANNSQAQALHARSMLHLLEETLDNVH-LNSS----PEVPFTAVDLGCSSGSNTIHIIDVI 85 (386)
T ss_pred ecceeccccccCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccC----CCcceeEEEecCCCCccHHHHHHHH
Confidence 4589999999999999999999999999999999999999998742 1211 1268999999999999999999999
Q ss_pred HHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCcc----------------ccceeeccCccccccCCCC
Q 017702 85 IEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHA----------------RKYFAAGLPGSFHSRLFPR 148 (367)
Q Consensus 85 i~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~----------------~~~f~~gvp~SFy~~l~P~ 148 (367)
|++|+++|++.+. ..| ||||||||||+||||+||+.|+.. ++||++|||||||+||||+
T Consensus 86 I~~i~~~~~~~~~--~~p---e~qv~~nDLP~NDFNtlF~~L~~~~~~~~~~~~~~~~~~~~~~f~~gvpGSFY~RLfP~ 160 (386)
T PLN02668 86 VKHMSKRYESAGL--DPP---EFSAFFSDLPSNDFNTLFQLLPPLANYGGSMEECLAASGHRSYFAAGVPGSFYRRLFPA 160 (386)
T ss_pred HHHHHHHhhhcCC--CCC---cceEEecCCCCCCHHHHHhhchhhhhhhcchhhhccccCCCceEEEecCccccccccCC
Confidence 9999999987432 267 999999999999999999999742 2499999999999999999
Q ss_pred CceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEEEEeecc
Q 017702 149 SSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAAV 228 (367)
Q Consensus 149 ~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g~ 228 (367)
+|+||+||++||||||++|+.+.|+.+++||||+||+++++|+|++||++||++||..||++||+||+|||+||++++|
T Consensus 161 ~Slh~~~Ss~slHWLS~vP~~l~d~~s~~~Nkg~iyi~~~s~~v~~aY~~Qf~~D~~~FL~~Ra~ELvpGG~mvl~~~G- 239 (386)
T PLN02668 161 RSIDVFHSAFSLHWLSQVPESVTDKRSAAYNKGRVFIHGASESTANAYKRQFQADLAGFLRARAQEMKRGGAMFLVCLG- 239 (386)
T ss_pred CceEEEEeeccceecccCchhhccCCcccccCCceEecCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEEec-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCchhhHHHH-HHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEEecCCC----
Q 017702 229 VPDGIPLSNSYVGVFNNI-LGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLSQPRR---- 303 (367)
Q Consensus 229 ~~n~~~~~~~~~~~~~~~-l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~~~p~~---- 303 (367)
|++..+..+.....+|+. +.++|++||.||+|++|++|+||+|+|+||++|++++|+++|+|+|+++|.++..++
T Consensus 240 r~~~~~~~~~~~~~~~~~~l~~al~dlv~eGlI~eek~dsFniP~Y~ps~eEv~~~Ie~~gsF~I~~le~~~~~~~~~~~ 319 (386)
T PLN02668 240 RTSVDPTDQGGAGLLFGTHFQDAWDDLVQEGLVTSEKRDSFNIPVYAPSLQDFKEVVEANGSFAIDKLEVFKGGSPLVVN 319 (386)
T ss_pred CCCCCcccCCchhHHHHHHHHHHHHHHHHcCCCCHHHHhcccCcccCCCHHHHHHHHhhcCCEEeeeeEEeeccCccccc
Confidence 876555444335566776 999999999999999999999999999999999999999999999999999875421
Q ss_pred -C----CCHHHHHHhHHhhhhhhhhhccCHHHHHHHHHHHHHHHHhhhhHHHHhcCCeEEEEEEEE
Q 017702 304 -R----ITANEYASGIRAGIDGLIKKHFGDEFVDEIFNYFTTKVEENYSIIEEKIRNVSNLFISLK 364 (367)
Q Consensus 304 -~----~~~~~v~~~iRa~~~~~l~~~~~~~~~de~f~ry~~~~~~~~~~~~~~~~~~~~~~~~l~ 364 (367)
+ ..+..+++++||+.+|++.+|||++++|++|+||+++++.+.+.. .++.+.++++++|.
T Consensus 320 ~~~d~~~~g~~~a~~~RA~~E~ll~~HFG~~i~D~lF~r~~~~v~~~~~~~-~~~~~~~~~~~sL~ 384 (386)
T PLN02668 320 EPDDAAEVGRAMANSCRSVAGVLVDAHIGEELSNELFLRVERRATSHAKEL-LEKLQFFHIVASLS 384 (386)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhh-cccCceEEEEEEEe
Confidence 1 124568999999999999999999999999999999999988854 25667888888874
|
|
| >PF03492 Methyltransf_7: SAM dependent carboxyl methyltransferase; InterPro: IPR005299 This family of plant methyltransferases contains enzymes that act on a variety of substrates including salicylic acid, jasmonic acid and 7-Methylxanthine | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-86 Score=645.37 Aligned_cols=314 Identities=49% Similarity=0.814 Sum_probs=260.6
Q ss_pred HHHHHHhhhcccccCCCCCCCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHH
Q 017702 42 ISEAIADKLDLKILGFDDTLKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNT 121 (367)
Q Consensus 42 l~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~ 121 (367)
++++|.+++.... .+++++|||||||+|+||+.+++.||++|+++|++.+. .++| ||||||||||+||||+
T Consensus 1 ~~~ai~~~~~~~~-----~~~~~~iaD~GcS~G~Nsl~~~~~ii~~i~~~~~~~~~-~~~~---e~~v~~nDlP~NDFn~ 71 (334)
T PF03492_consen 1 LEEAIKELYNSSN-----NPKPFRIADLGCSSGPNSLLAVSNIIDAIRERCRSSNN-QPPP---EFQVFFNDLPSNDFNT 71 (334)
T ss_dssp -HHHHHHHHHSTT-----TTTEEEEEEES--SSHHHHHHHHHHHHHHHHHHHCTT--SS-----EEEEEEEE-TTS-HHH
T ss_pred ChHHHHHHHhcCC-----CCCceEEEecCCCCCccHHHHHHHHHHHHHHHhhhhcC-CCCC---eEEEEeCCCCCccHHH
Confidence 4677777553222 57899999999999999999999999999999987541 1367 9999999999999999
Q ss_pred HhhcCCcc-------ccceeeccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCccccc-CCCHHHH
Q 017702 122 LFKSLPHA-------RKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCS-ESNIEVV 193 (367)
Q Consensus 122 lf~~l~~~-------~~~f~~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~-~~~~~~~ 193 (367)
||++|+.. ++||++|||||||+||||++|+||+||++||||||++|+.+.++.+++||||+||++ +++++|.
T Consensus 72 lF~~l~~~~~~~~~~~~~f~~gvpgSFy~rLfP~~Svh~~~Ss~alHWLS~vP~~l~~~~~~~~Nkg~i~~~~~~~~~v~ 151 (334)
T PF03492_consen 72 LFKSLPSFQQSLKKFRNYFVSGVPGSFYGRLFPSNSVHFGHSSYALHWLSQVPEELVDKSSPAWNKGNIYISRTSPPEVA 151 (334)
T ss_dssp HHHCHHHHHHHHHHTTSEEEEEEES-TTS--S-TT-EEEEEEES-TTB-SSS-CCCCTTTSTTTSTTTSSSSTTS-HHHH
T ss_pred HHHhChhhhhccCCCceEEEEecCchhhhccCCCCceEEEEEechhhhcccCCcccccccccccccCcEEEecCCCHHHH
Confidence 99999875 799999999999999999999999999999999999999999999999999999998 7899999
Q ss_pred HHHHHHHHhhHHHHHHHHHHhhccCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcc
Q 017702 194 RAYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTY 273 (367)
Q Consensus 194 ~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y 273 (367)
+||++||++||.+||++||+||+|||+||++++| +++..+. +.+...+|+.|.++|++||.||+|+++++|+||+|+|
T Consensus 152 ~ay~~Qf~~D~~~FL~~Ra~ELv~GG~mvl~~~g-r~~~~~~-~~~~~~~~~~l~~~l~dMv~eGlI~~ek~dsfniP~Y 229 (334)
T PF03492_consen 152 KAYAKQFQKDFSSFLKARAEELVPGGRMVLTFLG-RDEEDPS-STGSCMLWDLLADALRDMVAEGLISEEKVDSFNIPIY 229 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEE--STSSTT-STTCCCHHHHHHHHHHHHHHTTSS-HCCCCTG--SBB
T ss_pred HHHHHHHHHHHHHHHHHhhheeccCcEEEEEEee-ccccccc-cCCcchHHHHHHHHHHHHHHcCCcCHHHhhceeCCcc
Confidence 9999999999999999999999999999999999 8874432 2345689999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHhCCceEEeEEEEEecCCC------------CCCHHHHHHhHHhhhhhhhhhccCHHHHHHHHHHHHHH
Q 017702 274 NATPKELEAIIRTNGNFTIEKMEKLSQPRR------------RITANEYASGIRAGIDGLIKKHFGDEFVDEIFNYFTTK 341 (367)
Q Consensus 274 ~~s~eE~~~~l~~~g~F~I~~lE~~~~p~~------------~~~~~~v~~~iRa~~~~~l~~~~~~~~~de~f~ry~~~ 341 (367)
+||.+|++++|+++|+|+|+++|.+..+.. ...++.+++++||+.+|++.+|||++++|+||+||+++
T Consensus 230 ~ps~eEv~~~I~~~gsF~I~~le~~~~~~~~~~~~~~~~~d~~~~~~~~~~~iRA~~e~~l~~hfG~ei~D~LF~r~~~~ 309 (334)
T PF03492_consen 230 FPSPEEVRAIIEEEGSFEIEKLELFEQPWWSVPDDESWKEDAKEYARNVANYIRAVFEPLLKAHFGEEIMDELFERYAKK 309 (334)
T ss_dssp ---HHHHHHHHHHHTSEEEEEEEEEEEETCCTCTTT-STTTHHCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHhcCCCEEEEEEEEEeecccccchhhhcccchhhhHHHHHHhHHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 999999999999999999999999984411 12467899999999999999999999999999999999
Q ss_pred HHhhhhHHHHhcCCeEEEEEEEEec
Q 017702 342 VEENYSIIEEKIRNVSNLFISLKRF 366 (367)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~l~~~ 366 (367)
++++++....++++.++++++|+|+
T Consensus 310 v~~~~~~~~~~~~~~~~i~~~L~Rk 334 (334)
T PF03492_consen 310 VAEHLEKEKSRNMKFVNIVVSLTRK 334 (334)
T ss_dssp HHHHHHHTHTT-BEEEEEEEEEEE-
T ss_pred HHHHHHHhhccCCCcEEEEEEEeeC
Confidence 9999987655668899999999996
|
Caffeine is synthesized through sequential three-step methylation of xanthine derivatives at positions 7-N, 3-N, and 1-N. The protein 7-methylxanthine methyltransferase (designated as CaMXMT) catalyses the second step to produce theobromine [].; GO: 0008168 methyltransferase activity; PDB: 2EFJ_A 1M6E_X 2EG5_C 3B5I_B. |
| >PRK14103 trans-aconitate 2-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.2e-14 Score=135.51 Aligned_cols=225 Identities=15% Similarity=0.181 Sum_probs=143.6
Q ss_pred chHHHhhHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCC
Q 017702 22 YSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQK 101 (367)
Q Consensus 22 ~sY~~nS~~Q~~~~~~~~~ll~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~ 101 (367)
..|.+++..|.+.+..+++.+. .....+|+|+|||+|..+..+.+..
T Consensus 5 ~~y~~~~~~~~~~~~~ll~~l~----------------~~~~~~vLDlGcG~G~~~~~l~~~~----------------- 51 (255)
T PRK14103 5 DVYLAFADHRGRPFYDLLARVG----------------AERARRVVDLGCGPGNLTRYLARRW----------------- 51 (255)
T ss_pred HHHHHHHhHhhCHHHHHHHhCC----------------CCCCCEEEEEcCCCCHHHHHHHHHC-----------------
Confidence 5799999999877764433321 2345899999999998887664221
Q ss_pred CCcceeEEEEcCCCccchHHHhhcCCccccceeeccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCC
Q 017702 102 PSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKG 181 (367)
Q Consensus 102 p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g 181 (367)
| ..+|+--|+..+- -...+. ..--|..+. .+.+.|.+++|+++|+.++||+.+
T Consensus 52 p---~~~v~gvD~s~~~-~~~a~~---~~~~~~~~d----~~~~~~~~~fD~v~~~~~l~~~~d---------------- 104 (255)
T PRK14103 52 P---GAVIEALDSSPEM-VAAARE---RGVDARTGD----VRDWKPKPDTDVVVSNAALQWVPE---------------- 104 (255)
T ss_pred C---CCEEEEEECCHHH-HHHHHh---cCCcEEEcC----hhhCCCCCCceEEEEehhhhhCCC----------------
Confidence 2 2357777775321 111221 112244443 245567789999999999999652
Q ss_pred cccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCC
Q 017702 182 SIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLS 261 (367)
Q Consensus 182 ~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~ 261 (367)
...+|+.-++-|+|||+|++.+.+ .... ..+. .+..+...+.+.
T Consensus 105 ----------------------~~~~l~~~~~~LkpgG~l~~~~~~-~~~~---------~~~~----~~~~~~~~~~w~ 148 (255)
T PRK14103 105 ----------------------HADLLVRWVDELAPGSWIAVQVPG-NFDA---------PSHA----AVRALARREPWA 148 (255)
T ss_pred ----------------------HHHHHHHHHHhCCCCcEEEEEcCC-CcCC---------hhHH----HHHHHhccCchh
Confidence 235788888999999999998776 2111 0111 112222222111
Q ss_pred Hhhhh--ccCCCcccCCHHHHHHHHHhCCceEEeEEEEEecCCCCCCHHHHHHhHHhh-hhhhhhhccCHHHHHHHHHHH
Q 017702 262 EEKVD--SFNLPTYNATPKELEAIIRTNGNFTIEKMEKLSQPRRRITANEYASGIRAG-IDGLIKKHFGDEFVDEIFNYF 338 (367)
Q Consensus 262 ~~~~d--~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~~~p~~~~~~~~v~~~iRa~-~~~~l~~~~~~~~~de~f~ry 338 (367)
.. +. .+..+..+.+++++.+++++.| |++...+..... .......+..|+++. +.++++ .++++.+++|.+.+
T Consensus 149 ~~-~~~~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~ 224 (255)
T PRK14103 149 KL-LRDIPFRVGAVVQTPAGYAELLTDAG-CKVDAWETTYVH-QLTGEDPVLDWITGTALRPVRE-RLSDDSWEQFRAEL 224 (255)
T ss_pred HH-hcccccccCcCCCCHHHHHHHHHhCC-CeEEEEeeeeee-eCCCchhhhhhhhccchhhhhh-hCCHHHHHHHHHHH
Confidence 10 11 1223456789999999999997 987765543222 233456788899865 467776 69999999999999
Q ss_pred HHHHHhhh
Q 017702 339 TTKVEENY 346 (367)
Q Consensus 339 ~~~~~~~~ 346 (367)
.+.+++..
T Consensus 225 ~~~l~~~~ 232 (255)
T PRK14103 225 IPLLREAY 232 (255)
T ss_pred HHHHHHHC
Confidence 99988774
|
|
| >PRK01683 trans-aconitate 2-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=5e-14 Score=132.93 Aligned_cols=227 Identities=15% Similarity=0.203 Sum_probs=143.7
Q ss_pred chHHHhhHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCC
Q 017702 22 YSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQK 101 (367)
Q Consensus 22 ~sY~~nS~~Q~~~~~~~~~ll~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~ 101 (367)
..|.+++..|.+....++..+ . ..+..+|+|+|||+|..+..+.+..
T Consensus 7 ~~Y~~~~~~~~~~~~~ll~~~----------~------~~~~~~vLDiGcG~G~~~~~la~~~----------------- 53 (258)
T PRK01683 7 SLYLKFEDERTRPARDLLARV----------P------LENPRYVVDLGCGPGNSTELLVERW----------------- 53 (258)
T ss_pred HHHHHHHHHhhcHHHHHHhhC----------C------CcCCCEEEEEcccCCHHHHHHHHHC-----------------
Confidence 579999988877766433221 1 2345799999999999988775322
Q ss_pred CCcceeEEEEcCCCccchHHHhhcCCccccceeeccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCC
Q 017702 102 PSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKG 181 (367)
Q Consensus 102 p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g 181 (367)
| .-+|+-.|+...-....-+.++ +--|..+. + ..+.|++++|+++|+.++||+.+
T Consensus 54 ~---~~~v~gvD~s~~~i~~a~~~~~--~~~~~~~d---~-~~~~~~~~fD~v~~~~~l~~~~d---------------- 108 (258)
T PRK01683 54 P---AARITGIDSSPAMLAEARSRLP--DCQFVEAD---I-ASWQPPQALDLIFANASLQWLPD---------------- 108 (258)
T ss_pred C---CCEEEEEECCHHHHHHHHHhCC--CCeEEECc---h-hccCCCCCccEEEEccChhhCCC----------------
Confidence 1 2368888876432221111111 12244443 2 24457789999999999999642
Q ss_pred cccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCC
Q 017702 182 SIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLS 261 (367)
Q Consensus 182 ~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~ 261 (367)
...+|+...+.|+|||.+++.+++ .... ..+. .++++.......
T Consensus 109 ----------------------~~~~l~~~~~~LkpgG~~~~~~~~-~~~~---------~~~~----~~~~~~~~~~w~ 152 (258)
T PRK01683 109 ----------------------HLELFPRLVSLLAPGGVLAVQMPD-NLDE---------PSHV----LMREVAENGPWE 152 (258)
T ss_pred ----------------------HHHHHHHHHHhcCCCcEEEEECCC-CCCC---------HHHH----HHHHHHccCchH
Confidence 235788888999999999998754 1110 0111 122322221111
Q ss_pred HhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEE-ecCCCCCCHHHHHHhHHhhh-hhhhhhccCHHHHHHHHHHHH
Q 017702 262 EEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKL-SQPRRRITANEYASGIRAGI-DGLIKKHFGDEFVDEIFNYFT 339 (367)
Q Consensus 262 ~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~-~~p~~~~~~~~v~~~iRa~~-~~~l~~~~~~~~~de~f~ry~ 339 (367)
..-...-..+.++++.+++...+...| +.++..+.. .++ +.++..+.+|++++. .+++. .++++..++|.++|.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~f~~~~~ 228 (258)
T PRK01683 153 QNLPDRGARRAPLPPPHAYYDALAPAA-CRVDIWHTTYYHP--MPSAQAIVEWVKGTGLRPFLD-PLTESEQAAFLAAYL 228 (258)
T ss_pred HHhccccccCcCCCCHHHHHHHHHhCC-Cceeeeeeeeeee--cCCchhhhhhhhhccHHHHHh-hCCHHHHHHHHHHHH
Confidence 110011112446789999999999987 666444332 233 556788999999754 77775 699999999999999
Q ss_pred HHHHhhh
Q 017702 340 TKVEENY 346 (367)
Q Consensus 340 ~~~~~~~ 346 (367)
+.+.+..
T Consensus 229 ~~~~~~~ 235 (258)
T PRK01683 229 ARIAEAY 235 (258)
T ss_pred HHHHHHC
Confidence 9998773
|
|
| >PRK10258 biotin biosynthesis protein BioC; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=6.7e-14 Score=131.62 Aligned_cols=208 Identities=13% Similarity=0.126 Sum_probs=134.3
Q ss_pred chHHHhhHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCC
Q 017702 22 YSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQK 101 (367)
Q Consensus 22 ~sY~~nS~~Q~~~~~~~~~ll~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~ 101 (367)
.+|.+++..|+.+...+...+. ....-+|+|+|||+|.+|..+. +.
T Consensus 18 ~~Y~~~~~~q~~~a~~l~~~l~----------------~~~~~~vLDiGcG~G~~~~~l~--------~~---------- 63 (251)
T PRK10258 18 AHYEQHAELQRQSADALLAMLP----------------QRKFTHVLDAGCGPGWMSRYWR--------ER---------- 63 (251)
T ss_pred HhHhHHHHHHHHHHHHHHHhcC----------------ccCCCeEEEeeCCCCHHHHHHH--------Hc----------
Confidence 4799999999988887655432 2235689999999998876553 10
Q ss_pred CCcceeEEEEcCCCccchHHHhhcCCccccceeeccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCC
Q 017702 102 PSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKG 181 (367)
Q Consensus 102 p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g 181 (367)
.-+++..|+...--...-+..+ ...|..+. +..-.+|++++|+++|+.++||+.+
T Consensus 64 ----~~~v~~~D~s~~~l~~a~~~~~--~~~~~~~d---~~~~~~~~~~fD~V~s~~~l~~~~d---------------- 118 (251)
T PRK10258 64 ----GSQVTALDLSPPMLAQARQKDA--ADHYLAGD---IESLPLATATFDLAWSNLAVQWCGN---------------- 118 (251)
T ss_pred ----CCeEEEEECCHHHHHHHHhhCC--CCCEEEcC---cccCcCCCCcEEEEEECchhhhcCC----------------
Confidence 1257888875422111111111 12344443 3333467889999999999999653
Q ss_pred cccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCC
Q 017702 182 SIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLS 261 (367)
Q Consensus 182 ~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~ 261 (367)
...+|..-.+-|+|||.+++++++ .++ +..+.++|..+-..
T Consensus 119 ----------------------~~~~l~~~~~~Lk~gG~l~~~~~~-~~~------------~~el~~~~~~~~~~---- 159 (251)
T PRK10258 119 ----------------------LSTALRELYRVVRPGGVVAFTTLV-QGS------------LPELHQAWQAVDER---- 159 (251)
T ss_pred ----------------------HHHHHHHHHHHcCCCeEEEEEeCC-CCc------------hHHHHHHHHHhccC----
Confidence 335788888999999999999998 443 12344555532111
Q ss_pred HhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEEecCCCCCCHHHHHHhHHhhhhhhh-----hhccCHHHHHHHHH
Q 017702 262 EEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLSQPRRRITANEYASGIRAGIDGLI-----KKHFGDEFVDEIFN 336 (367)
Q Consensus 262 ~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~~~p~~~~~~~~v~~~iRa~~~~~l-----~~~~~~~~~de~f~ 336 (367)
....-+++.+|+.+++...+ +++ ..+.+..+ +.++..+..++|..+.... ...+++..+.++.+
T Consensus 160 -------~~~~~~~~~~~l~~~l~~~~-~~~-~~~~~~~~--f~~~~~~l~~lk~~G~~~~~~~~~~~~~~~~~~~~~~~ 228 (251)
T PRK10258 160 -------PHANRFLPPDAIEQALNGWR-YQH-HIQPITLW--FDDALSAMRSLKGIGATHLHEGRDPRILTRSQLQRLQL 228 (251)
T ss_pred -------CccccCCCHHHHHHHHHhCC-cee-eeeEEEEE--CCCHHHHHHHHHHhCCCCCCCCCCCCCCcHHHHHHHHH
Confidence 11233678999999998764 543 33444333 6788999999998764332 23577777777766
Q ss_pred HH
Q 017702 337 YF 338 (367)
Q Consensus 337 ry 338 (367)
.|
T Consensus 229 ~~ 230 (251)
T PRK10258 229 AW 230 (251)
T ss_pred hc
Confidence 66
|
|
| >TIGR02072 BioC biotin biosynthesis protein BioC | Back alignment and domain information |
|---|
Probab=99.53 E-value=6.3e-13 Score=122.61 Aligned_cols=216 Identities=18% Similarity=0.264 Sum_probs=146.2
Q ss_pred chHHHhhHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCC
Q 017702 22 YSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQK 101 (367)
Q Consensus 22 ~sY~~nS~~Q~~~~~~~~~ll~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~ 101 (367)
.+|.+.+..|+.+...+.+.+.... ..++.+|+|+|||+|..+..+.+..
T Consensus 7 ~~y~~~~~~q~~~~~~l~~~~~~~~-------------~~~~~~vLDlG~G~G~~~~~l~~~~----------------- 56 (240)
T TIGR02072 7 KTYDRHAKIQREMAKRLLALLKEKG-------------IFIPASVLDIGCGTGYLTRALLKRF----------------- 56 (240)
T ss_pred hchhHHHHHHHHHHHHHHHHhhhhc-------------cCCCCeEEEECCCccHHHHHHHHhC-----------------
Confidence 5799999999988888777665211 1335789999999999887665322
Q ss_pred CCcceeEEEEcCCCccchHHHhhcCCccccceeeccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCC
Q 017702 102 PSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKG 181 (367)
Q Consensus 102 p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g 181 (367)
| ..+++..|......+..-+.+++ +-.|..+ ++....+|++++|+++++.++||+.
T Consensus 57 ~---~~~~~~~D~~~~~~~~~~~~~~~-~~~~~~~---d~~~~~~~~~~fD~vi~~~~l~~~~----------------- 112 (240)
T TIGR02072 57 P---QAEFIALDISAGMLAQAKTKLSE-NVQFICG---DAEKLPLEDSSFDLIVSNLALQWCD----------------- 112 (240)
T ss_pred C---CCcEEEEeChHHHHHHHHHhcCC-CCeEEec---chhhCCCCCCceeEEEEhhhhhhcc-----------------
Confidence 2 33678888865544444443432 2233333 3445567889999999999999964
Q ss_pred cccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCC
Q 017702 182 SIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLS 261 (367)
Q Consensus 182 ~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~ 261 (367)
|...+|....+-|+|||.+++..++ .+. + ..+..++..
T Consensus 113 ---------------------~~~~~l~~~~~~L~~~G~l~~~~~~-~~~-----------~-~~~~~~~~~-------- 150 (240)
T TIGR02072 113 ---------------------DLSQALSELARVLKPGGLLAFSTFG-PGT-----------L-HELRQSFGQ-------- 150 (240)
T ss_pred ---------------------CHHHHHHHHHHHcCCCcEEEEEeCC-ccC-----------H-HHHHHHHHH--------
Confidence 3335889999999999999999877 322 0 112222221
Q ss_pred HhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEEecCCCCCCHHHHHHhHHhhhh-hhhhhccCHHHHHHHHHHHHH
Q 017702 262 EEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLSQPRRRITANEYASGIRAGID-GLIKKHFGDEFVDEIFNYFTT 340 (367)
Q Consensus 262 ~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~~~p~~~~~~~~v~~~iRa~~~-~~l~~~~~~~~~de~f~ry~~ 340 (367)
....+++.+++.+++.+. |....++....+..+.+...+..++|..+. ......++.+...++.+.|.+
T Consensus 151 --------~~~~~~~~~~~~~~l~~~--f~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 220 (240)
T TIGR02072 151 --------HGLRYLSLDELKALLKNS--FELLTLEEELITLSFDDPLDVLRHLKKTGANGLSSGRTSRKQLKAFLERYEQ 220 (240)
T ss_pred --------hccCCCCHHHHHHHHHHh--cCCcEEEEEEEEEeCCCHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHHHH
Confidence 112378899999999875 877766655444345677889999988653 333345888888888888877
Q ss_pred HHH
Q 017702 341 KVE 343 (367)
Q Consensus 341 ~~~ 343 (367)
.+.
T Consensus 221 ~~~ 223 (240)
T TIGR02072 221 EFQ 223 (240)
T ss_pred hhc
Confidence 664
|
This enzyme, which is found in biotin biosynthetic gene clusters in proteobacteria, firmicutes, green-sulfur bacteria, fusobacterium and bacteroides, is believed to carry out an enzymatic step prior to the formation of pimeloyl-CoA (although attribution of this annotation is not traceable). The enzyme appears related to methyltransferases by homology. |
| >COG4106 Tam Trans-aconitate methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.33 E-value=3e-11 Score=109.83 Aligned_cols=221 Identities=16% Similarity=0.261 Sum_probs=136.7
Q ss_pred CCCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCc
Q 017702 60 TLKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPG 139 (367)
Q Consensus 60 ~~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~ 139 (367)
...+.+|+|+|||+|..|.++.+. +.. -+++=-|-....-..--+.+|+ --|.-|.
T Consensus 28 ~~~~~~v~DLGCGpGnsTelL~~R--------wP~------------A~i~GiDsS~~Mla~Aa~rlp~--~~f~~aD-- 83 (257)
T COG4106 28 LERPRRVVDLGCGPGNSTELLARR--------WPD------------AVITGIDSSPAMLAKAAQRLPD--ATFEEAD-- 83 (257)
T ss_pred ccccceeeecCCCCCHHHHHHHHh--------CCC------------CeEeeccCCHHHHHHHHHhCCC--Cceeccc--
Confidence 345799999999999999998842 221 1333333332222222222322 1233333
Q ss_pred cccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 140 SFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
....-|+...|++||+.+||||.+.|. .|.+--.+|.|||
T Consensus 84 --l~~w~p~~~~dllfaNAvlqWlpdH~~--------------------------------------ll~rL~~~L~Pgg 123 (257)
T COG4106 84 --LRTWKPEQPTDLLFANAVLQWLPDHPE--------------------------------------LLPRLVSQLAPGG 123 (257)
T ss_pred --HhhcCCCCccchhhhhhhhhhccccHH--------------------------------------HHHHHHHhhCCCc
Confidence 355668899999999999999776553 6677778999999
Q ss_pred eEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCC-CcccCCHHHHHHHHHhCCceEEeEEEEE
Q 017702 220 LMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNL-PTYNATPKELEAIIRTNGNFTIEKMEKL 298 (367)
Q Consensus 220 ~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~-P~y~~s~eE~~~~l~~~g~F~I~~lE~~ 298 (367)
.|.+.|++ |-...+ +.+ +++.++++-. ..++..+.. ----+++.-|-+++...+ =+|+--++.
T Consensus 124 ~LAVQmPd---N~deps-------H~~----mr~~A~~~p~-~~~l~~~~~~r~~v~s~a~Yy~lLa~~~-~rvDiW~T~ 187 (257)
T COG4106 124 VLAVQMPD---NLDEPS-------HRL----MRETADEAPF-AQELGGRGLTRAPLPSPAAYYELLAPLA-CRVDIWHTT 187 (257)
T ss_pred eEEEECCC---ccCchh-------HHH----HHHHHhcCch-hhhhCccccccCCCCCHHHHHHHhCccc-ceeeeeeee
Confidence 99999986 322111 232 3333333311 122221110 112478899999987764 455444443
Q ss_pred -ecCCCCCCHHHHHHhHHhhh-hhhhhhccCHHHHHHHHHHHHHHHHhhhhHHHHhcCC----eEEEEEEEEe
Q 017702 299 -SQPRRRITANEYASGIRAGI-DGLIKKHFGDEFVDEIFNYFTTKVEENYSIIEEKIRN----VSNLFISLKR 365 (367)
Q Consensus 299 -~~p~~~~~~~~v~~~iRa~~-~~~l~~~~~~~~~de~f~ry~~~~~~~~~~~~~~~~~----~~~~~~~l~~ 365 (367)
.++ ..+...+..|+|+++ -|++.. ++++-...|.++|..++++++.. ..+++ +--+|||-+|
T Consensus 188 Y~h~--l~~a~aIvdWvkgTgLrP~L~~-L~e~~~~~FL~~Y~~~l~~aYP~--~~dGr~ll~FpRlFiVA~~ 255 (257)
T COG4106 188 YYHQ--LPGADAIVDWVKGTGLRPYLDR-LDEEERQRFLDRYLALLAEAYPP--RADGRVLLAFPRLFIVATR 255 (257)
T ss_pred cccc--CCCccchhhheeccccceeccc-cCHHHHHHHHHHHHHHHHHhCCC--ccCCcEEeecceEEEEEec
Confidence 344 235578999999865 688884 99999999999999999776443 23333 3345666554
|
|
| >PLN02233 ubiquinone biosynthesis methyltransferase | Back alignment and domain information |
|---|
Probab=99.05 E-value=7.4e-09 Score=98.47 Aligned_cols=167 Identities=15% Similarity=0.161 Sum_probs=93.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC------ccccceee
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP------HARKYFAA 135 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~------~~~~~f~~ 135 (367)
...+|+|+|||+|..+..+...+ .| .-+|+--|+..+--...-+..+ ..+--|..
T Consensus 73 ~~~~VLDlGcGtG~~~~~la~~~----------------~~---~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~ 133 (261)
T PLN02233 73 MGDRVLDLCCGSGDLAFLLSEKV----------------GS---DGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIE 133 (261)
T ss_pred CCCEEEEECCcCCHHHHHHHHHh----------------CC---CCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEE
Confidence 35799999999999887655322 11 2256666765433222111111 00112333
Q ss_pred ccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhh
Q 017702 136 GLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEEL 215 (367)
Q Consensus 136 gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL 215 (367)
+. ..+--+|++++|++++++++||+. |...+|+.-++-|
T Consensus 134 ~d---~~~lp~~~~sfD~V~~~~~l~~~~--------------------------------------d~~~~l~ei~rvL 172 (261)
T PLN02233 134 GD---ATDLPFDDCYFDAITMGYGLRNVV--------------------------------------DRLKAMQEMYRVL 172 (261)
T ss_pred cc---cccCCCCCCCEeEEEEecccccCC--------------------------------------CHHHHHHHHHHHc
Confidence 33 233346889999999999999964 3335888899999
Q ss_pred ccCceEEEEeecccCCCCCCCCCchhhHHHHH-HHHHHHHH-HcCCCCHhhhhccC-CCcccCCHHHHHHHHHhCCceEE
Q 017702 216 VPGGLMVLILAAVVPDGIPLSNSYVGVFNNIL-GSCFNDLA-KMGVLSEEKVDSFN-LPTYNATPKELEAIIRTNGNFTI 292 (367)
Q Consensus 216 ~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l-~~al~~m~-~eG~i~~~~~d~f~-~P~y~~s~eE~~~~l~~~g~F~I 292 (367)
||||++++..++ +++.. ....+++.. ...+.-+. .-|. .+++.... .=-.+++.+|+.+++++.| |++
T Consensus 173 kpGG~l~i~d~~-~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~--~~~y~~l~~s~~~f~s~~el~~ll~~aG-F~~ 243 (261)
T PLN02233 173 KPGSRVSILDFN-KSTQP-----FTTSMQEWMIDNVVVPVATGYGL--AKEYEYLKSSINEYLTGEELEKLALEAG-FSS 243 (261)
T ss_pred CcCcEEEEEECC-CCCcH-----HHHHHHHHHHhhhhhHHHHHhCC--hHHHHHHHHHHHhcCCHHHHHHHHHHCC-CCE
Confidence 999999999888 54421 011111111 11111010 0121 11110000 0012789999999999997 987
Q ss_pred eEEEE
Q 017702 293 EKMEK 297 (367)
Q Consensus 293 ~~lE~ 297 (367)
.+...
T Consensus 244 ~~~~~ 248 (261)
T PLN02233 244 AKHYE 248 (261)
T ss_pred EEEEE
Confidence 65433
|
|
| >PF13489 Methyltransf_23: Methyltransferase domain; PDB: 3JWJ_A 3JWH_B 2AOV_B 2AOT_A 1JQD_B 2AOX_A 1JQE_A 2AOU_B 2AOW_A 3DLI_C | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.8e-10 Score=99.70 Aligned_cols=138 Identities=22% Similarity=0.281 Sum_probs=89.0
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCcc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGS 140 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~S 140 (367)
....+|+|+|||+|.++..+. + .+ .+++-.|........ . ..++..
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~--------~----------~~----~~~~g~D~~~~~~~~--~----------~~~~~~ 66 (161)
T PF13489_consen 21 KPGKRVLDIGCGTGSFLRALA--------K----------RG----FEVTGVDISPQMIEK--R----------NVVFDN 66 (161)
T ss_dssp TTTSEEEEESSTTSHHHHHHH--------H----------TT----SEEEEEESSHHHHHH--T----------TSEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHH--------H----------hC----CEEEEEECCHHHHhh--h----------hhhhhh
Confidence 456899999999998766553 1 12 267777775322111 0 011122
Q ss_pred cc--ccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccC
Q 017702 141 FH--SRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPG 218 (367)
Q Consensus 141 Fy--~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 218 (367)
|. ....|++++|+|+|+.+|||+. |+..+|+.-.+-|+||
T Consensus 67 ~~~~~~~~~~~~fD~i~~~~~l~~~~--------------------------------------d~~~~l~~l~~~Lkpg 108 (161)
T PF13489_consen 67 FDAQDPPFPDGSFDLIICNDVLEHLP--------------------------------------DPEEFLKELSRLLKPG 108 (161)
T ss_dssp EECHTHHCHSSSEEEEEEESSGGGSS--------------------------------------HHHHHHHHHHHCEEEE
T ss_pred hhhhhhhccccchhhHhhHHHHhhcc--------------------------------------cHHHHHHHHHHhcCCC
Confidence 32 3445889999999999999966 4456999999999999
Q ss_pred ceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeE
Q 017702 219 GLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEK 294 (367)
Q Consensus 219 G~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~ 294 (367)
|++++..+. +... ....+... ..... . .--..+.+.+++++++++.| |+|++
T Consensus 109 G~l~~~~~~-~~~~--------------~~~~~~~~---~~~~~---~--~~~~~~~~~~~~~~ll~~~G-~~iv~ 160 (161)
T PF13489_consen 109 GYLVISDPN-RDDP--------------SPRSFLKW---RYDRP---Y--GGHVHFFSPDELRQLLEQAG-FEIVE 160 (161)
T ss_dssp EEEEEEEEB-TTSH--------------HHHHHHHC---CGTCH---H--TTTTEEBBHHHHHHHHHHTT-EEEEE
T ss_pred CEEEEEEcC-Ccch--------------hhhHHHhc---CCcCc---c--CceeccCCHHHHHHHHHHCC-CEEEE
Confidence 999999998 4321 00111110 11100 0 01225679999999999997 98864
|
... |
| >PTZ00098 phosphoethanolamine N-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.2e-08 Score=97.14 Aligned_cols=150 Identities=14% Similarity=0.156 Sum_probs=93.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc-cccceeeccCcc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH-ARKYFAAGLPGS 140 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~-~~~~f~~gvp~S 140 (367)
+..+|+|+|||+|..+..+... + ..+|+-.|+..+-....=+.... .+-.|.. ++
T Consensus 52 ~~~~VLDiGcG~G~~a~~la~~--------~-------------~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~---~D 107 (263)
T PTZ00098 52 ENSKVLDIGSGLGGGCKYINEK--------Y-------------GAHVHGVDICEKMVNIAKLRNSDKNKIEFEA---ND 107 (263)
T ss_pred CCCEEEEEcCCCChhhHHHHhh--------c-------------CCEEEEEECCHHHHHHHHHHcCcCCceEEEE---CC
Confidence 4579999999999988766411 0 12577778764332221111111 1122333 34
Q ss_pred ccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCce
Q 017702 141 FHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGL 220 (367)
Q Consensus 141 Fy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~ 220 (367)
+...-+|++++|+++|..++++++. .|...+|+.-++-|+|||+
T Consensus 108 ~~~~~~~~~~FD~V~s~~~l~h~~~------------------------------------~d~~~~l~~i~r~LkPGG~ 151 (263)
T PTZ00098 108 ILKKDFPENTFDMIYSRDAILHLSY------------------------------------ADKKKLFEKCYKWLKPNGI 151 (263)
T ss_pred cccCCCCCCCeEEEEEhhhHHhCCH------------------------------------HHHHHHHHHHHHHcCCCcE
Confidence 5555678899999999888766431 2555789999999999999
Q ss_pred EEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEE
Q 017702 221 MVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEK 297 (367)
Q Consensus 221 lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~ 297 (367)
|+++-+. ..+... +. +.+...+. .. .+..+++++|.+++++.| |++...+.
T Consensus 152 lvi~d~~-~~~~~~----~~----~~~~~~~~----~~------------~~~~~~~~~~~~~l~~aG-F~~v~~~d 202 (263)
T PTZ00098 152 LLITDYC-ADKIEN----WD----EEFKAYIK----KR------------KYTLIPIQEYGDLIKSCN-FQNVVAKD 202 (263)
T ss_pred EEEEEec-cccccC----cH----HHHHHHHH----hc------------CCCCCCHHHHHHHHHHCC-CCeeeEEe
Confidence 9998776 432110 00 11111111 10 123579999999999997 98877754
|
|
| >TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.1e-09 Score=101.58 Aligned_cols=167 Identities=15% Similarity=0.157 Sum_probs=95.3
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC---ccccceeeccCc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP---HARKYFAAGLPG 139 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~---~~~~~f~~gvp~ 139 (367)
..+|+|+|||+|..+..+.+.+ .| ..+++-.|+..+-....-..+. ..+-.+..+
T Consensus 46 ~~~vLDiGcG~G~~~~~la~~~----------------~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~--- 103 (231)
T TIGR02752 46 GTSALDVCCGTADWSIALAEAV----------------GP---EGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHG--- 103 (231)
T ss_pred CCEEEEeCCCcCHHHHHHHHHh----------------CC---CCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEe---
Confidence 4799999999999988776433 12 3367888875432211111111 111123333
Q ss_pred cccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 140 SFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
+...-.+|++++|++++..++||++. +..+|+...+-|+|||
T Consensus 104 d~~~~~~~~~~fD~V~~~~~l~~~~~--------------------------------------~~~~l~~~~~~Lk~gG 145 (231)
T TIGR02752 104 NAMELPFDDNSFDYVTIGFGLRNVPD--------------------------------------YMQVLREMYRVVKPGG 145 (231)
T ss_pred chhcCCCCCCCccEEEEecccccCCC--------------------------------------HHHHHHHHHHHcCcCe
Confidence 23333467899999999999999652 2357888889999999
Q ss_pred eEEEEeecccCCCCCCCCCchhhHH----HHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEE
Q 017702 220 LMVLILAAVVPDGIPLSNSYVGVFN----NILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKM 295 (367)
Q Consensus 220 ~lvl~~~g~~~n~~~~~~~~~~~~~----~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~l 295 (367)
++++.-.+ .++... ....+ ..+...+..+...+........ ..-..+++.+|+++++++.| |++.++
T Consensus 146 ~l~~~~~~-~~~~~~-----~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~aG-f~~~~~ 216 (231)
T TIGR02752 146 KVVCLETS-QPTIPG-----FKQLYFFYFKYIMPLFGKLFAKSYKEYSWLQ--ESTRDFPGMDELAEMFQEAG-FKDVEV 216 (231)
T ss_pred EEEEEECC-CCCChH-----HHHHHHHHHcChhHHhhHHhcCCHHHHHHHH--HHHHHcCCHHHHHHHHHHcC-CCeeEE
Confidence 99987766 443210 00000 0001111111111100000000 01234789999999999997 998877
Q ss_pred EEE
Q 017702 296 EKL 298 (367)
Q Consensus 296 E~~ 298 (367)
+.+
T Consensus 217 ~~~ 219 (231)
T TIGR02752 217 KSY 219 (231)
T ss_pred EEc
Confidence 665
|
MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species. |
| >PRK08317 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.3e-07 Score=86.81 Aligned_cols=220 Identities=16% Similarity=0.137 Sum_probs=120.0
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC--CccccceeeccC
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL--PHARKYFAAGLP 138 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l--~~~~~~f~~gvp 138 (367)
....+|+|+|||+|..+..+.+.. .| .-+++--|+..+.....-+.. ......|..+.
T Consensus 18 ~~~~~vLdiG~G~G~~~~~~a~~~----------------~~---~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d- 77 (241)
T PRK08317 18 QPGDRVLDVGCGPGNDARELARRV----------------GP---EGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGD- 77 (241)
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhc----------------CC---CcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecc-
Confidence 345799999999999888776333 11 225667776543222111110 01111233332
Q ss_pred ccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccC
Q 017702 139 GSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPG 218 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 218 (367)
+....++++++|++++..++||+.+ +..+|+...+-|+||
T Consensus 78 --~~~~~~~~~~~D~v~~~~~~~~~~~--------------------------------------~~~~l~~~~~~L~~g 117 (241)
T PRK08317 78 --ADGLPFPDGSFDAVRSDRVLQHLED--------------------------------------PARALAEIARVLRPG 117 (241)
T ss_pred --cccCCCCCCCceEEEEechhhccCC--------------------------------------HHHHHHHHHHHhcCC
Confidence 2333467789999999999999653 335788888999999
Q ss_pred ceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEE
Q 017702 219 GLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKL 298 (367)
Q Consensus 219 G~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~ 298 (367)
|.+++.... .+... .. ......+..+...|.. .+ .- ..+..++.+++++.| |+...++.+
T Consensus 118 G~l~~~~~~-~~~~~-~~-~~~~~~~~~~~~~~~~---~~----------~~---~~~~~~~~~~l~~aG-f~~~~~~~~ 177 (241)
T PRK08317 118 GRVVVLDTD-WDTLV-WH-SGDRALMRKILNFWSD---HF----------AD---PWLGRRLPGLFREAG-LTDIEVEPY 177 (241)
T ss_pred cEEEEEecC-CCcee-ec-CCChHHHHHHHHHHHh---cC----------CC---CcHHHHHHHHHHHcC-CCceeEEEE
Confidence 999988754 21110 00 0111112222222221 11 11 234568999999997 988888777
Q ss_pred ecCCCCCCHHHHHHhHHhhhhhhh-hhccCHHHHHHHHHHHHHHHHhhhhHHHHhcCCeEEEEEEEEec
Q 017702 299 SQPRRRITANEYASGIRAGIDGLI-KKHFGDEFVDEIFNYFTTKVEENYSIIEEKIRNVSNLFISLKRF 366 (367)
Q Consensus 299 ~~p~~~~~~~~v~~~iRa~~~~~l-~~~~~~~~~de~f~ry~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 366 (367)
..+.....+......+......+. ...++++-++++++..++..... ...-.+.++++.-|+
T Consensus 178 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~~~~~~~~~~~~k 240 (241)
T PRK08317 178 TLIETDLKEADKGFGLIRAARRAVEAGGISADEADAWLADLAQLARAG------EFFFSVTGFLVVGRK 240 (241)
T ss_pred EEeccCcchhhHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhcC------CEEEEEEEEEEEEeC
Confidence 654222233333333332222221 23467777888888777644321 112256666665544
|
|
| >PLN02244 tocopherol O-methyltransferase | Back alignment and domain information |
|---|
Probab=98.99 E-value=2.1e-08 Score=98.98 Aligned_cols=159 Identities=16% Similarity=0.192 Sum_probs=92.5
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHH---HhhcCCc-cccceeec
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNT---LFKSLPH-ARKYFAAG 136 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~---lf~~l~~-~~~~f~~g 136 (367)
....+|+|+|||+|.++..+.+.. ..+|+--|+..+.-.. ..+.... .+-.|..+
T Consensus 117 ~~~~~VLDiGCG~G~~~~~La~~~---------------------g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~ 175 (340)
T PLN02244 117 KRPKRIVDVGCGIGGSSRYLARKY---------------------GANVKGITLSPVQAARANALAAAQGLSDKVSFQVA 175 (340)
T ss_pred CCCCeEEEecCCCCHHHHHHHHhc---------------------CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEc
Confidence 345799999999999998876422 1134555554322111 1111111 11234444
Q ss_pred cCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhc
Q 017702 137 LPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELV 216 (367)
Q Consensus 137 vp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~ 216 (367)
. ..+.-+|++++|+++|..++|++. |...+|+.-.+-||
T Consensus 176 D---~~~~~~~~~~FD~V~s~~~~~h~~--------------------------------------d~~~~l~e~~rvLk 214 (340)
T PLN02244 176 D---ALNQPFEDGQFDLVWSMESGEHMP--------------------------------------DKRKFVQELARVAA 214 (340)
T ss_pred C---cccCCCCCCCccEEEECCchhccC--------------------------------------CHHHHHHHHHHHcC
Confidence 3 344456889999999999998854 23357888889999
Q ss_pred cCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEE
Q 017702 217 PGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKME 296 (367)
Q Consensus 217 pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE 296 (367)
|||+|++.... ..+..+... ... ..-...+..+.. .+.+| .+.+.+|+.+++++.| |+..+.+
T Consensus 215 pGG~lvi~~~~-~~~~~~~~~-~l~---~~~~~~~~~i~~----------~~~~p-~~~s~~~~~~~l~~aG-f~~v~~~ 277 (340)
T PLN02244 215 PGGRIIIVTWC-HRDLEPGET-SLK---PDEQKLLDKICA----------AYYLP-AWCSTSDYVKLAESLG-LQDIKTE 277 (340)
T ss_pred CCcEEEEEEec-ccccccccc-cCC---HHHHHHHHHHHh----------hccCC-CCCCHHHHHHHHHHCC-CCeeEee
Confidence 99999998876 433211100 000 001111222111 11222 2358999999999997 9887766
Q ss_pred EE
Q 017702 297 KL 298 (367)
Q Consensus 297 ~~ 298 (367)
.+
T Consensus 278 d~ 279 (340)
T PLN02244 278 DW 279 (340)
T ss_pred eC
Confidence 54
|
|
| >PRK15068 tRNA mo(5)U34 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=3.4e-09 Score=103.83 Aligned_cols=163 Identities=17% Similarity=0.171 Sum_probs=98.5
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhc----CCcc-ccceeecc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKS----LPHA-RKYFAAGL 137 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~----l~~~-~~~f~~gv 137 (367)
.-+|+|+|||+|..+..++.. .+ . +|+--|... .+-.-++. .... +-.|..+
T Consensus 123 g~~VLDIGCG~G~~~~~la~~-----------------g~---~-~V~GiD~S~-~~l~q~~a~~~~~~~~~~i~~~~~- 179 (322)
T PRK15068 123 GRTVLDVGCGNGYHMWRMLGA-----------------GA---K-LVVGIDPSQ-LFLCQFEAVRKLLGNDQRAHLLPL- 179 (322)
T ss_pred CCEEEEeccCCcHHHHHHHHc-----------------CC---C-EEEEEcCCH-HHHHHHHHHHHhcCCCCCeEEEeC-
Confidence 469999999999999876521 12 3 467777443 22222221 1111 1223322
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
++ +.+-.++++|+++|..++||.. |...+|+.-++.|+|
T Consensus 180 --d~-e~lp~~~~FD~V~s~~vl~H~~--------------------------------------dp~~~L~~l~~~Lkp 218 (322)
T PRK15068 180 --GI-EQLPALKAFDTVFSMGVLYHRR--------------------------------------SPLDHLKQLKDQLVP 218 (322)
T ss_pred --CH-HHCCCcCCcCEEEECChhhccC--------------------------------------CHHHHHHHHHHhcCC
Confidence 22 3333378999999999999854 333588899999999
Q ss_pred CceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEE
Q 017702 218 GGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEK 297 (367)
Q Consensus 218 GG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~ 297 (367)
||.|++..+...++... .+...+.+..+...++.||.+++..++++.| |++.+++.
T Consensus 219 GG~lvl~~~~i~~~~~~-----------------------~l~p~~~y~~~~~~~~lps~~~l~~~L~~aG-F~~i~~~~ 274 (322)
T PRK15068 219 GGELVLETLVIDGDENT-----------------------VLVPGDRYAKMRNVYFIPSVPALKNWLERAG-FKDVRIVD 274 (322)
T ss_pred CcEEEEEEEEecCCCcc-----------------------ccCchhHHhcCccceeCCCHHHHHHHHHHcC-CceEEEEe
Confidence 99999987651222110 0111112233444456799999999999997 99888765
Q ss_pred EecCCCCCCHHHHHHhHH
Q 017702 298 LSQPRRRITANEYASGIR 315 (367)
Q Consensus 298 ~~~p~~~~~~~~v~~~iR 315 (367)
.... ..+.+....|++
T Consensus 275 ~~~t--~~~eqr~t~w~~ 290 (322)
T PRK15068 275 VSVT--TTEEQRKTEWMT 290 (322)
T ss_pred CCCC--CccccccccCcc
Confidence 5322 122234455554
|
|
| >PLN02336 phosphoethanolamine N-methyltransferase | Back alignment and domain information |
|---|
Probab=98.91 E-value=7.2e-08 Score=99.05 Aligned_cols=183 Identities=16% Similarity=0.263 Sum_probs=108.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhc-CCc--cccceeeccC
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKS-LPH--ARKYFAAGLP 138 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~-l~~--~~~~f~~gvp 138 (367)
...+|+|+|||+|..++.+.+.. ..+++--|+...-- ...+. ... .+-.|..+
T Consensus 266 ~~~~vLDiGcG~G~~~~~la~~~---------------------~~~v~gvDiS~~~l-~~A~~~~~~~~~~v~~~~~-- 321 (475)
T PLN02336 266 PGQKVLDVGCGIGGGDFYMAENF---------------------DVHVVGIDLSVNMI-SFALERAIGRKCSVEFEVA-- 321 (475)
T ss_pred CCCEEEEEeccCCHHHHHHHHhc---------------------CCEEEEEECCHHHH-HHHHHHhhcCCCceEEEEc--
Confidence 34699999999998776654211 12577777753211 11111 111 11123333
Q ss_pred ccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccC
Q 017702 139 GSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPG 218 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 218 (367)
++....+|++++|+++|..+++|+.+ ...+|+.-++-|+||
T Consensus 322 -d~~~~~~~~~~fD~I~s~~~l~h~~d--------------------------------------~~~~l~~~~r~Lkpg 362 (475)
T PLN02336 322 -DCTKKTYPDNSFDVIYSRDTILHIQD--------------------------------------KPALFRSFFKWLKPG 362 (475)
T ss_pred -CcccCCCCCCCEEEEEECCcccccCC--------------------------------------HHHHHHHHHHHcCCC
Confidence 35555678899999999999999653 235888889999999
Q ss_pred ceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEE
Q 017702 219 GLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKL 298 (367)
Q Consensus 219 G~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~ 298 (367)
|++++..+. +.+..+ . ..+...+. ..| +..++.+++.+++++.| |++...+.+
T Consensus 363 G~l~i~~~~-~~~~~~-~--------~~~~~~~~---~~g-------------~~~~~~~~~~~~l~~aG-F~~i~~~d~ 415 (475)
T PLN02336 363 GKVLISDYC-RSPGTP-S--------PEFAEYIK---QRG-------------YDLHDVQAYGQMLKDAG-FDDVIAEDR 415 (475)
T ss_pred eEEEEEEec-cCCCCC-c--------HHHHHHHH---hcC-------------CCCCCHHHHHHHHHHCC-Ceeeeeecc
Confidence 999999887 543221 0 11111111 111 24678999999999997 999866544
Q ss_pred ecCCCCCCHHHHHHhHHhhhhhhh------hhccCHHHHHHHHHHHHHHH
Q 017702 299 SQPRRRITANEYASGIRAGIDGLI------KKHFGDEFVDEIFNYFTTKV 342 (367)
Q Consensus 299 ~~p~~~~~~~~v~~~iRa~~~~~l------~~~~~~~~~de~f~ry~~~~ 342 (367)
. ..+..++..+...+. ...++++..+.+...+.+.+
T Consensus 416 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 457 (475)
T PLN02336 416 T--------DQFLQVLQRELDAVEKEKDEFISDFSEEDYNDIVGGWKAKL 457 (475)
T ss_pred h--------HHHHHHHHHHHHHHHhCHHHHHHhcCHHHHHHHHHhHHHHH
Confidence 2 233333333322221 12356666666655555543
|
|
| >TIGR00740 methyltransferase, putative | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.8e-08 Score=94.27 Aligned_cols=160 Identities=21% Similarity=0.287 Sum_probs=92.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc---c-ccceeecc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH---A-RKYFAAGL 137 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~---~-~~~f~~gv 137 (367)
...+|+|+|||+|..+..+.+.+ . .| ..+++--|+..+--...=+.+.. . +--|..
T Consensus 53 ~~~~iLDlGcG~G~~~~~l~~~~--------~-------~p---~~~v~gvD~s~~ml~~a~~~~~~~~~~~~v~~~~-- 112 (239)
T TIGR00740 53 PDSNVYDLGCSRGAATLSARRNI--------N-------QP---NVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILC-- 112 (239)
T ss_pred CCCEEEEecCCCCHHHHHHHHhc--------C-------CC---CCeEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEE--
Confidence 34689999999999988776433 0 23 44677778753221111111111 1 112333
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
+++..-.++ +.|+++|++++||++. .|...+|+.-.+-|+|
T Consensus 113 -~d~~~~~~~--~~d~v~~~~~l~~~~~------------------------------------~~~~~~l~~i~~~Lkp 153 (239)
T TIGR00740 113 -NDIRHVEIK--NASMVILNFTLQFLPP------------------------------------EDRIALLTKIYEGLNP 153 (239)
T ss_pred -CChhhCCCC--CCCEEeeecchhhCCH------------------------------------HHHHHHHHHHHHhcCC
Confidence 344433333 5789999999999752 1445689999999999
Q ss_pred CceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHH-cCCCCHhhh----hccCCCcccCCHHHHHHHHHhCCceE
Q 017702 218 GGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAK-MGVLSEEKV----DSFNLPTYNATPKELEAIIRTNGNFT 291 (367)
Q Consensus 218 GG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~-eG~i~~~~~----d~f~~P~y~~s~eE~~~~l~~~g~F~ 291 (367)
||++++.-.. ..+... ..+.+...+..+.. .| .+.+++ +.+.-.....|++|+.+++++.| |+
T Consensus 154 gG~l~i~d~~-~~~~~~--------~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aG-F~ 221 (239)
T TIGR00740 154 NGVLVLSEKF-RFEDTK--------INHLLIDLHHQFKRANG-YSELEISQKRTALENVMRTDSIETHKARLKNVG-FS 221 (239)
T ss_pred CeEEEEeecc-cCCCHh--------HHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHhccCCCCCHHHHHHHHHHcC-Cc
Confidence 9999988654 332211 11233333333332 44 344433 22222334568899999998887 64
|
A simple BLAST search finds all members of this family and weaker hits to a large number of known and predicted methyltransferases. A single iteration with PSI-BLAST, keeping only clear members of the family, leads to a large number of highly significant hits to a set of known and predicted methyltransferases with a large repertoire of different specifities. This model is restricted to a subfamily found so far only in the Proteobacteria, sharing consistent length, full-length homology, and on average better than 35 % identity. It is reasonable to predict equivalent function within this subfamily. |
| >COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.1e-08 Score=95.65 Aligned_cols=165 Identities=21% Similarity=0.255 Sum_probs=103.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccc---cceeeccC
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHAR---KYFAAGLP 138 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~---~~f~~gvp 138 (367)
+..+|||+|||||.-++.+.+.+ . .-+|+.-|..++-.+.--+.+.... -.|+.|
T Consensus 51 ~g~~vLDva~GTGd~a~~~~k~~--------g------------~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~-- 108 (238)
T COG2226 51 PGDKVLDVACGTGDMALLLAKSV--------G------------TGEVVGLDISESMLEVAREKLKKKGVQNVEFVVG-- 108 (238)
T ss_pred CCCEEEEecCCccHHHHHHHHhc--------C------------CceEEEEECCHHHHHHHHHHhhccCccceEEEEe--
Confidence 56999999999999999887444 1 1257787877655444333333211 224444
Q ss_pred ccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccC
Q 017702 139 GSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPG 218 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 218 (367)
...+-.||++|+|++.+++.||++.+++ ..|+--++-||||
T Consensus 109 -dAe~LPf~D~sFD~vt~~fglrnv~d~~--------------------------------------~aL~E~~RVlKpg 149 (238)
T COG2226 109 -DAENLPFPDNSFDAVTISFGLRNVTDID--------------------------------------KALKEMYRVLKPG 149 (238)
T ss_pred -chhhCCCCCCccCEEEeeehhhcCCCHH--------------------------------------HHHHHHHHhhcCC
Confidence 4677778999999999999999988655 3677777889999
Q ss_pred ceEEEEeecccCCCCCCCCCchhhHHHHHHH-HHH---HHHHcCCCCHhhhh-ccCCCcccCCHHHHHHHHHhCCceEEe
Q 017702 219 GLMVLILAAVVPDGIPLSNSYVGVFNNILGS-CFN---DLAKMGVLSEEKVD-SFNLPTYNATPKELEAIIRTNGNFTIE 293 (367)
Q Consensus 219 G~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~-al~---~m~~eG~i~~~~~d-~f~~P~y~~s~eE~~~~l~~~g~F~I~ 293 (367)
|++++.=++ .++..+.. ...+..... ++- .++.. +.+++. -....--+|+.+++.+.+++.| |+..
T Consensus 150 G~~~vle~~-~p~~~~~~----~~~~~~~~~~v~P~~g~~~~~---~~~~y~yL~eSi~~~p~~~~l~~~~~~~g-f~~i 220 (238)
T COG2226 150 GRLLVLEFS-KPDNPVLR----KAYILYYFKYVLPLIGKLVAK---DAEAYEYLAESIRRFPDQEELKQMIEKAG-FEEV 220 (238)
T ss_pred eEEEEEEcC-CCCchhhH----HHHHHHHHHhHhhhhceeeec---ChHHHHHHHHHHHhCCCHHHHHHHHHhcC-ceEE
Confidence 999988888 55432111 001111111 111 11110 011111 0112233799999999999987 8765
Q ss_pred EEE
Q 017702 294 KME 296 (367)
Q Consensus 294 ~lE 296 (367)
..+
T Consensus 221 ~~~ 223 (238)
T COG2226 221 RYE 223 (238)
T ss_pred eeE
Confidence 543
|
|
| >TIGR00452 methyltransferase, putative | Back alignment and domain information |
|---|
Probab=98.83 E-value=7.4e-08 Score=94.01 Aligned_cols=163 Identities=15% Similarity=0.125 Sum_probs=95.7
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC----Ccc-ccceeecc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL----PHA-RKYFAAGL 137 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l----~~~-~~~f~~gv 137 (367)
..+|+|+|||+|..+..++.. .+ . .|+--|... .+-.-|+.+ ... +..+.
T Consensus 122 g~~VLDvGCG~G~~~~~~~~~-----------------g~---~-~v~GiDpS~-~ml~q~~~~~~~~~~~~~v~~~--- 176 (314)
T TIGR00452 122 GRTILDVGCGSGYHMWRMLGH-----------------GA---K-SLVGIDPTV-LFLCQFEAVRKLLDNDKRAILE--- 176 (314)
T ss_pred CCEEEEeccCCcHHHHHHHHc-----------------CC---C-EEEEEcCCH-HHHHHHHHHHHHhccCCCeEEE---
Confidence 469999999999987665411 11 2 344445432 221112111 111 11121
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
+++ .+.+-+.+++|+|+|+.++||+.+ ...+|+.-++-|+|
T Consensus 177 ~~~-ie~lp~~~~FD~V~s~gvL~H~~d--------------------------------------p~~~L~el~r~Lkp 217 (314)
T TIGR00452 177 PLG-IEQLHELYAFDTVFSMGVLYHRKS--------------------------------------PLEHLKQLKHQLVI 217 (314)
T ss_pred ECC-HHHCCCCCCcCEEEEcchhhccCC--------------------------------------HHHHHHHHHHhcCC
Confidence 122 234445578999999999999542 22488999999999
Q ss_pred CceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEE
Q 017702 218 GGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEK 297 (367)
Q Consensus 218 GG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~ 297 (367)
||.|++.+....++... .+...+....+...++.||.+++..++++.| |+..++..
T Consensus 218 GG~Lvletl~i~g~~~~-----------------------~l~p~~ry~k~~nv~flpS~~~L~~~L~~aG-F~~V~i~~ 273 (314)
T TIGR00452 218 KGELVLETLVIDGDLNT-----------------------VLVPKDRYAKMKNVYFIPSVSALKNWLEKVG-FENFRILD 273 (314)
T ss_pred CCEEEEEEEEecCcccc-----------------------ccCchHHHHhccccccCCCHHHHHHHHHHCC-CeEEEEEe
Confidence 99999998751222110 0011112233444567899999999999997 98887765
Q ss_pred EecCCCCCCHHHHHHhHH
Q 017702 298 LSQPRRRITANEYASGIR 315 (367)
Q Consensus 298 ~~~p~~~~~~~~v~~~iR 315 (367)
....+ ........|++
T Consensus 274 ~~~tt--~~eqr~t~w~~ 289 (314)
T TIGR00452 274 VLKTT--PEEQRKTDWIL 289 (314)
T ss_pred ccCCC--HHHhhhhhhhh
Confidence 43331 12234556665
|
Known examples to date are restricted to the proteobacteria. |
| >PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities [] | Back alignment and domain information |
|---|
Probab=98.81 E-value=5e-09 Score=98.14 Aligned_cols=169 Identities=21% Similarity=0.232 Sum_probs=66.8
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC---ccccceeecc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP---HARKYFAAGL 137 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~---~~~~~f~~gv 137 (367)
....+|+|+|||||..|+.+...+ .| ..+|+--|...+--..-=+.+. ..+-.|+.|+
T Consensus 46 ~~g~~vLDv~~GtG~~~~~l~~~~----------------~~---~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~d 106 (233)
T PF01209_consen 46 RPGDRVLDVACGTGDVTRELARRV----------------GP---NGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGD 106 (233)
T ss_dssp -S--EEEEET-TTSHHHHHHGGGS----------------S------EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-B
T ss_pred CCCCEEEEeCCChHHHHHHHHHHC----------------CC---ccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcC
Confidence 345799999999999998776322 22 3467777776533222111111 1122355554
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
..+--+|++|+|.+.+++.+|-+. |..+.|+.-.+-|||
T Consensus 107 ---a~~lp~~d~sfD~v~~~fglrn~~--------------------------------------d~~~~l~E~~RVLkP 145 (233)
T PF01209_consen 107 ---AEDLPFPDNSFDAVTCSFGLRNFP--------------------------------------DRERALREMYRVLKP 145 (233)
T ss_dssp ---TTB--S-TT-EEEEEEES-GGG-S--------------------------------------SHHHHHHHHHHHEEE
T ss_pred ---HHHhcCCCCceeEEEHHhhHHhhC--------------------------------------CHHHHHHHHHHHcCC
Confidence 445557999999999999999865 334577888899999
Q ss_pred CceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHh--hhhcc-CCCcccCCHHHHHHHHHhCCceEEeE
Q 017702 218 GGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEE--KVDSF-NLPTYNATPKELEAIIRTNGNFTIEK 294 (367)
Q Consensus 218 GG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~--~~d~f-~~P~y~~s~eE~~~~l~~~g~F~I~~ 294 (367)
||++++.=++ +++.. ....++......+.=++ -.+++.+ .+... ..---+|+.+|+.+++++.| |+..+
T Consensus 146 GG~l~ile~~-~p~~~-----~~~~~~~~y~~~ilP~~-g~l~~~~~~~Y~yL~~Si~~f~~~~~~~~~l~~~G-f~~v~ 217 (233)
T PF01209_consen 146 GGRLVILEFS-KPRNP-----LLRALYKFYFKYILPLI-GRLLSGDREAYRYLPESIRRFPSPEELKELLEEAG-FKNVE 217 (233)
T ss_dssp EEEEEEEEEE-B-SSH-----HHHHHHHH---------------------------------------------------
T ss_pred CeEEEEeecc-CCCCc-----hhhceeeeeeccccccc-ccccccccccccccccccccccccccccccccccc-ccccc
Confidence 9999998888 66531 11122221111110000 0122221 11111 12224689999999999997 87655
Q ss_pred EEE
Q 017702 295 MEK 297 (367)
Q Consensus 295 lE~ 297 (367)
.+.
T Consensus 218 ~~~ 220 (233)
T PF01209_consen 218 YRP 220 (233)
T ss_dssp ---
T ss_pred ccc
Confidence 443
|
Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C. |
| >PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.7e-07 Score=88.57 Aligned_cols=159 Identities=17% Similarity=0.283 Sum_probs=92.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc----cccceeecc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH----ARKYFAAGL 137 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~----~~~~f~~gv 137 (367)
...+|+|+|||+|..|..+.+. ..+|+..|+...--...-+.... .+-.|..+.
T Consensus 44 ~~~~vLDiGcG~G~~a~~la~~----------------------g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~d 101 (255)
T PRK11036 44 RPLRVLDAGGGEGQTAIKLAEL----------------------GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHCA 101 (255)
T ss_pred CCCEEEEeCCCchHHHHHHHHc----------------------CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEcC
Confidence 4579999999999988877521 12567777754221111111111 111233333
Q ss_pred Ccccccc-CCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhc
Q 017702 138 PGSFHSR-LFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELV 216 (367)
Q Consensus 138 p~SFy~~-l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~ 216 (367)
..+- -++++++|++++..++||+.+.+ .+|+.-++-|+
T Consensus 102 ---~~~l~~~~~~~fD~V~~~~vl~~~~~~~--------------------------------------~~l~~~~~~Lk 140 (255)
T PRK11036 102 ---AQDIAQHLETPVDLILFHAVLEWVADPK--------------------------------------SVLQTLWSVLR 140 (255)
T ss_pred ---HHHHhhhcCCCCCEEEehhHHHhhCCHH--------------------------------------HHHHHHHHHcC
Confidence 2211 14678999999999999976421 36777888999
Q ss_pred cCceEEEEeecccCCCCCCCCCchhhHHH-HHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEE
Q 017702 217 PGGLMVLILAAVVPDGIPLSNSYVGVFNN-ILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKM 295 (367)
Q Consensus 217 pGG~lvl~~~g~~~n~~~~~~~~~~~~~~-~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~l 295 (367)
|||++++.+.. ... .+++ .+..-+. .+..|+...+.. ...|-+..+++++.+++++.| |+++..
T Consensus 141 pgG~l~i~~~n-~~~----------~~~~~~~~~~~~-~~~~~~~~~~~~--~~~p~~~~~~~~l~~~l~~aG-f~~~~~ 205 (255)
T PRK11036 141 PGGALSLMFYN-ANG----------LLMHNMVAGNFD-YVQAGMPKRKKR--TLSPDYPLDPEQVYQWLEEAG-WQIMGK 205 (255)
T ss_pred CCeEEEEEEEC-ccH----------HHHHHHHccChH-HHHhcCcccccc--CCCCCCCCCHHHHHHHHHHCC-CeEeee
Confidence 99999988765 211 0011 1111111 112232211111 123556789999999999997 999765
Q ss_pred EEE
Q 017702 296 EKL 298 (367)
Q Consensus 296 E~~ 298 (367)
.-+
T Consensus 206 ~gi 208 (255)
T PRK11036 206 TGV 208 (255)
T ss_pred eeE
Confidence 443
|
|
| >PRK11207 tellurite resistance protein TehB; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.1e-07 Score=86.60 Aligned_cols=138 Identities=19% Similarity=0.280 Sum_probs=80.7
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccc-eeeccCccc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKY-FAAGLPGSF 141 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~-f~~gvp~SF 141 (367)
..+|+|+|||+|.+++.+.+. -.+|+--|+..+- -...+........ .+..+.+++
T Consensus 31 ~~~vLDiGcG~G~~a~~La~~----------------------g~~V~gvD~S~~~-i~~a~~~~~~~~~~~v~~~~~d~ 87 (197)
T PRK11207 31 PGKTLDLGCGNGRNSLYLAAN----------------------GFDVTAWDKNPMS-IANLERIKAAENLDNLHTAVVDL 87 (197)
T ss_pred CCcEEEECCCCCHHHHHHHHC----------------------CCEEEEEeCCHHH-HHHHHHHHHHcCCCcceEEecCh
Confidence 479999999999999887631 1245555664321 1111111000000 011111222
Q ss_pred cccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceE
Q 017702 142 HSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLM 221 (367)
Q Consensus 142 y~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~l 221 (367)
.. +-+++++|+++|+.++||++. .|...+++.-++-|+|||++
T Consensus 88 ~~-~~~~~~fD~I~~~~~~~~~~~------------------------------------~~~~~~l~~i~~~LkpgG~~ 130 (197)
T PRK11207 88 NN-LTFDGEYDFILSTVVLMFLEA------------------------------------KTIPGLIANMQRCTKPGGYN 130 (197)
T ss_pred hh-CCcCCCcCEEEEecchhhCCH------------------------------------HHHHHHHHHHHHHcCCCcEE
Confidence 22 223467999999999999652 15567899999999999996
Q ss_pred EE-EeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEE
Q 017702 222 VL-ILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEK 297 (367)
Q Consensus 222 vl-~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~ 297 (367)
++ ..+. .+..+.. . . |.+..+.+|+.+.++ | |++.+.+.
T Consensus 131 ~~~~~~~--~~~~~~~--------------------~-----------~-~~~~~~~~el~~~~~--~-~~~~~~~~ 170 (197)
T PRK11207 131 LIVAAMD--TADYPCT--------------------V-----------G-FPFAFKEGELRRYYE--G-WEMVKYNE 170 (197)
T ss_pred EEEEEec--CCCCCCC--------------------C-----------C-CCCccCHHHHHHHhC--C-CeEEEeeC
Confidence 55 4443 2211100 0 1 235578999999886 4 98877754
|
|
| >smart00828 PKS_MT Methyltransferase in polyketide synthase (PKS) enzymes | Back alignment and domain information |
|---|
Probab=98.78 E-value=2.1e-07 Score=85.84 Aligned_cols=140 Identities=15% Similarity=0.168 Sum_probs=85.6
Q ss_pred EEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc----cccceeeccCcc
Q 017702 65 KIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH----ARKYFAAGLPGS 140 (367)
Q Consensus 65 ~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~----~~~~f~~gvp~S 140 (367)
+|+|+|||+|..+..+.+.. | ..+++-.|+..+.....-+.+.. .+--|..+.
T Consensus 2 ~vLDiGcG~G~~~~~la~~~-----------------~---~~~v~gid~s~~~~~~a~~~~~~~gl~~~i~~~~~d--- 58 (224)
T smart00828 2 RVLDFGCGYGSDLIDLAERH-----------------P---HLQLHGYTISPEQAEVGRERIRALGLQGRIRIFYRD--- 58 (224)
T ss_pred eEEEECCCCCHHHHHHHHHC-----------------C---CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEecc---
Confidence 69999999999887665322 1 22455555543221111111110 111222222
Q ss_pred ccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCce
Q 017702 141 FHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGL 220 (367)
Q Consensus 141 Fy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~ 220 (367)
+....+ ++++|+++|..++|++. |+..+|+.-++-|+|||+
T Consensus 59 ~~~~~~-~~~fD~I~~~~~l~~~~--------------------------------------~~~~~l~~~~~~LkpgG~ 99 (224)
T smart00828 59 SAKDPF-PDTYDLVFGFEVIHHIK--------------------------------------DKMDLFSNISRHLKDGGH 99 (224)
T ss_pred cccCCC-CCCCCEeehHHHHHhCC--------------------------------------CHHHHHHHHHHHcCCCCE
Confidence 222223 46899999999999954 344689999999999999
Q ss_pred EEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEE
Q 017702 221 MVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKL 298 (367)
Q Consensus 221 lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~ 298 (367)
+++.... .+.... ... -..+.|+++.+++.+.+++.| |++.+.+.+
T Consensus 100 l~i~~~~-~~~~~~-------------------------~~~-----~~~~~~~~s~~~~~~~l~~~G-f~~~~~~~~ 145 (224)
T smart00828 100 LVLADFI-ANLLSA-------------------------IEH-----EETTSYLVTREEWAELLARNN-LRVVEGVDA 145 (224)
T ss_pred EEEEEcc-cccCcc-------------------------ccc-----cccccccCCHHHHHHHHHHCC-CeEEEeEEC
Confidence 9988764 221000 000 012445899999999999987 999887665
|
|
| >PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=8.8e-07 Score=88.86 Aligned_cols=187 Identities=10% Similarity=0.133 Sum_probs=105.1
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCcccc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSFH 142 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SFy 142 (367)
..+|+|+|||+|..++.+.+.. ..+|+--|+..+-....-+......--+..+. +
T Consensus 168 g~rVLDIGcG~G~~a~~la~~~---------------------g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~D----~ 222 (383)
T PRK11705 168 GMRVLDIGCGWGGLARYAAEHY---------------------GVSVVGVTISAEQQKLAQERCAGLPVEIRLQD----Y 222 (383)
T ss_pred CCEEEEeCCCccHHHHHHHHHC---------------------CCEEEEEeCCHHHHHHHHHHhccCeEEEEECc----h
Confidence 4699999999999888775321 12456666654332221111111111122222 2
Q ss_pred ccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEE
Q 017702 143 SRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMV 222 (367)
Q Consensus 143 ~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lv 222 (367)
..+ ++++|.++|...++|+.. +++..+++.-.+-|+|||+++
T Consensus 223 ~~l--~~~fD~Ivs~~~~ehvg~------------------------------------~~~~~~l~~i~r~LkpGG~lv 264 (383)
T PRK11705 223 RDL--NGQFDRIVSVGMFEHVGP------------------------------------KNYRTYFEVVRRCLKPDGLFL 264 (383)
T ss_pred hhc--CCCCCEEEEeCchhhCCh------------------------------------HHHHHHHHHHHHHcCCCcEEE
Confidence 222 578999999999888531 245568889999999999999
Q ss_pred EEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCC-cccCCHHHHHHHHHhCCceEEeEEEEEecC
Q 017702 223 LILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLP-TYNATPKELEAIIRTNGNFTIEKMEKLSQP 301 (367)
Q Consensus 223 l~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P-~y~~s~eE~~~~l~~~g~F~I~~lE~~~~p 301 (367)
+...+ .++..... ..-++.+.+| -+.|+.+++.+.++. .|+|..++.+...
T Consensus 265 l~~i~-~~~~~~~~-------------------------~~~i~~yifp~g~lps~~~i~~~~~~--~~~v~d~~~~~~h 316 (383)
T PRK11705 265 LHTIG-SNKTDTNV-------------------------DPWINKYIFPNGCLPSVRQIAQASEG--LFVMEDWHNFGAD 316 (383)
T ss_pred EEEcc-CCCCCCCC-------------------------CCCceeeecCCCcCCCHHHHHHHHHC--CcEEEEEecChhh
Confidence 99887 44321000 0112334455 367899999998763 4999888765322
Q ss_pred CCCCCHHHHHHhHHhhhh--hhhhhccCHHHHHHHHHHHHHHHHhh
Q 017702 302 RRRITANEYASGIRAGID--GLIKKHFGDEFVDEIFNYFTTKVEEN 345 (367)
Q Consensus 302 ~~~~~~~~v~~~iRa~~~--~~l~~~~~~~~~de~f~ry~~~~~~~ 345 (367)
..+.+..|.+.+-. +-+...+++.+.+ .+.-|-...+..
T Consensus 317 ----y~~TL~~W~~~f~~~~~~~~~~~~~~~~r-~w~~yl~~~~~~ 357 (383)
T PRK11705 317 ----YDRTLMAWHENFEAAWPELADNYSERFYR-MWRYYLLSCAGA 357 (383)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHhCCHHHHH-HHHHHHHHHHHH
Confidence 23444445443332 1122245544333 344444433333
|
|
| >PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=98.73 E-value=3.1e-08 Score=77.62 Aligned_cols=95 Identities=27% Similarity=0.349 Sum_probs=63.0
Q ss_pred eeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCccccccCC
Q 017702 67 ADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSFHSRLF 146 (367)
Q Consensus 67 aD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SFy~~l~ 146 (367)
+|+|||+|.++..+.+. + ..+++-.|....--...-+.......-+..+ ++..--+
T Consensus 1 LdiG~G~G~~~~~l~~~------------------~---~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~---d~~~l~~ 56 (95)
T PF08241_consen 1 LDIGCGTGRFAAALAKR------------------G---GASVTGIDISEEMLEQARKRLKNEGVSFRQG---DAEDLPF 56 (95)
T ss_dssp EEET-TTSHHHHHHHHT------------------T---TCEEEEEES-HHHHHHHHHHTTTSTEEEEES---BTTSSSS
T ss_pred CEecCcCCHHHHHHHhc------------------c---CCEEEEEeCCHHHHHHHHhcccccCchheee---hHHhCcc
Confidence 79999999999988632 0 1257777776432222222222221124444 4566688
Q ss_pred CCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEEE
Q 017702 147 PRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVL 223 (367)
Q Consensus 147 P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl 223 (367)
|++|+|++++..++||+. |...+|+..++-|||||++++
T Consensus 57 ~~~sfD~v~~~~~~~~~~--------------------------------------~~~~~l~e~~rvLk~gG~l~~ 95 (95)
T PF08241_consen 57 PDNSFDVVFSNSVLHHLE--------------------------------------DPEAALREIYRVLKPGGRLVI 95 (95)
T ss_dssp -TT-EEEEEEESHGGGSS--------------------------------------HHHHHHHHHHHHEEEEEEEEE
T ss_pred ccccccccccccceeecc--------------------------------------CHHHHHHHHHHHcCcCeEEeC
Confidence 999999999999999972 566799999999999999986
|
The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B .... |
| >PRK15451 tRNA cmo(5)U34 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.9e-07 Score=87.97 Aligned_cols=158 Identities=18% Similarity=0.256 Sum_probs=89.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhc-CC---cc-ccceeec
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKS-LP---HA-RKYFAAG 136 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~-l~---~~-~~~f~~g 136 (367)
...+|+|+|||+|.++..+...+ . .| ..+++.-|....- -...+. +. .. +--+..
T Consensus 56 ~~~~vLDlGcGtG~~~~~l~~~~--------~-------~~---~~~v~gvD~S~~m-l~~A~~~~~~~~~~~~v~~~~- 115 (247)
T PRK15451 56 PGTQVYDLGCSLGAATLSVRRNI--------H-------HD---NCKIIAIDNSPAM-IERCRRHIDAYKAPTPVDVIE- 115 (247)
T ss_pred CCCEEEEEcccCCHHHHHHHHhc--------C-------CC---CCeEEEEeCCHHH-HHHHHHHHHhcCCCCCeEEEe-
Confidence 34789999999999988765322 0 13 3467777775322 112111 11 11 112222
Q ss_pred cCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhc
Q 017702 137 LPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELV 216 (367)
Q Consensus 137 vp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~ 216 (367)
+++.+- |....|+++++.++||++. . +...+|+.-++-|+
T Consensus 116 --~d~~~~--~~~~~D~vv~~~~l~~l~~--~----------------------------------~~~~~l~~i~~~Lk 155 (247)
T PRK15451 116 --GDIRDI--AIENASMVVLNFTLQFLEP--S----------------------------------ERQALLDKIYQGLN 155 (247)
T ss_pred --CChhhC--CCCCCCEEehhhHHHhCCH--H----------------------------------HHHHHHHHHHHhcC
Confidence 333322 3345899999999999762 1 33468888899999
Q ss_pred cCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhcc----CCCcccCCHHHHHHHHHhCC
Q 017702 217 PGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSF----NLPTYNATPKELEAIIRTNG 288 (367)
Q Consensus 217 pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f----~~P~y~~s~eE~~~~l~~~g 288 (367)
|||.|++.-.- ..+... ..+.+...|..+....-.+++++..+ .--...-|+++..++|++.|
T Consensus 156 pGG~l~l~e~~-~~~~~~--------~~~~~~~~~~~~~~~~g~s~~ei~~~~~~~~~~~~~~~~~~~~~~L~~aG 222 (247)
T PRK15451 156 PGGALVLSEKF-SFEDAK--------VGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARLHKAG 222 (247)
T ss_pred CCCEEEEEEec-CCCcch--------hHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHcC
Confidence 99999997533 222111 11334445555444444555555321 11111237888888888886
|
|
| >PLN02396 hexaprenyldihydroxybenzoate methyltransferase | Back alignment and domain information |
|---|
Probab=98.71 E-value=5.3e-08 Score=95.33 Aligned_cols=152 Identities=14% Similarity=0.137 Sum_probs=90.4
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC---Cc-cccceeeccC
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL---PH-ARKYFAAGLP 138 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l---~~-~~~~f~~gvp 138 (367)
..+|+|+|||+|..+..+.. + ..+|+--|....-....-+.. +. .+-.|..+
T Consensus 132 g~~ILDIGCG~G~~s~~La~-------------------~---g~~V~GID~s~~~i~~Ar~~~~~~~~~~~i~~~~~-- 187 (322)
T PLN02396 132 GLKFIDIGCGGGLLSEPLAR-------------------M---GATVTGVDAVDKNVKIARLHADMDPVTSTIEYLCT-- 187 (322)
T ss_pred CCEEEEeeCCCCHHHHHHHH-------------------c---CCEEEEEeCCHHHHHHHHHHHHhcCcccceeEEec--
Confidence 46999999999998876641 0 225666676543222111111 00 01113332
Q ss_pred ccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccC
Q 017702 139 GSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPG 218 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 218 (367)
++.+-.++++++|+++|..++||+.+. ..||+..++-||||
T Consensus 188 -dae~l~~~~~~FD~Vi~~~vLeHv~d~--------------------------------------~~~L~~l~r~LkPG 228 (322)
T PLN02396 188 -TAEKLADEGRKFDAVLSLEVIEHVANP--------------------------------------AEFCKSLSALTIPN 228 (322)
T ss_pred -CHHHhhhccCCCCEEEEhhHHHhcCCH--------------------------------------HHHHHHHHHHcCCC
Confidence 233323467899999999999996642 35899999999999
Q ss_pred ceEEEEeecccCCCCCCCCCchhhHHHHHH--HHHHHHHHcCCCCHhhhhccCCCc-ccCCHHHHHHHHHhCCceEEeEE
Q 017702 219 GLMVLILAAVVPDGIPLSNSYVGVFNNILG--SCFNDLAKMGVLSEEKVDSFNLPT-YNATPKELEAIIRTNGNFTIEKM 295 (367)
Q Consensus 219 G~lvl~~~g~~~n~~~~~~~~~~~~~~~l~--~al~~m~~eG~i~~~~~d~f~~P~-y~~s~eE~~~~l~~~g~F~I~~l 295 (367)
|++++.+.. +... ..+..+. .-+...+..| ...| .+.+++|+.++++..| |++..+
T Consensus 229 G~liist~n-r~~~---------~~~~~i~~~eyi~~~lp~g----------th~~~~f~tp~eL~~lL~~aG-f~i~~~ 287 (322)
T PLN02396 229 GATVLSTIN-RTMR---------AYASTIVGAEYILRWLPKG----------THQWSSFVTPEELSMILQRAS-VDVKEM 287 (322)
T ss_pred cEEEEEECC-cCHH---------HHHHhhhhHHHHHhcCCCC----------CcCccCCCCHHHHHHHHHHcC-CeEEEE
Confidence 999999876 3210 0001010 0011111111 1112 3789999999999997 999877
Q ss_pred EEE
Q 017702 296 EKL 298 (367)
Q Consensus 296 E~~ 298 (367)
.-+
T Consensus 288 ~G~ 290 (322)
T PLN02396 288 AGF 290 (322)
T ss_pred eee
Confidence 544
|
|
| >PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.6e-07 Score=86.62 Aligned_cols=164 Identities=19% Similarity=0.242 Sum_probs=94.5
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc----cccceeeccC
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH----ARKYFAAGLP 138 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~----~~~~f~~gvp 138 (367)
..+|+|+|||+|..+..+.... .+ ..+++..|+..+-....=+.+.. .+-.|..
T Consensus 52 ~~~vldiG~G~G~~~~~l~~~~----------------~~---~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~--- 109 (239)
T PRK00216 52 GDKVLDLACGTGDLAIALAKAV----------------GK---TGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQ--- 109 (239)
T ss_pred CCeEEEeCCCCCHHHHHHHHHc----------------CC---CCeEEEEeCCHHHHHHHHHhhcccccccCeEEEe---
Confidence 4799999999999888776332 11 23678888864322222111111 1112332
Q ss_pred ccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccC
Q 017702 139 GSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPG 218 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 218 (367)
+++.+..++++++|++++++++|++++. ..+|+...+-|+||
T Consensus 110 ~d~~~~~~~~~~~D~I~~~~~l~~~~~~--------------------------------------~~~l~~~~~~L~~g 151 (239)
T PRK00216 110 GDAEALPFPDNSFDAVTIAFGLRNVPDI--------------------------------------DKALREMYRVLKPG 151 (239)
T ss_pred cccccCCCCCCCccEEEEecccccCCCH--------------------------------------HHHHHHHHHhccCC
Confidence 2344444677899999999999986542 24788888999999
Q ss_pred ceEEEEeecccCCCCCCCCCchhhHHHHHHHHHH--------HHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCce
Q 017702 219 GLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFN--------DLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNF 290 (367)
Q Consensus 219 G~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~--------~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F 290 (367)
|++++.... .++... +..+.+.+. .+........+.+. ..--.+++.+++..++++.| |
T Consensus 152 G~li~~~~~-~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~aG-f 218 (239)
T PRK00216 152 GRLVILEFS-KPTNPP---------LKKAYDFYLFKVLPLIGKLISKNAEAYSYLA--ESIRAFPDQEELAAMLEEAG-F 218 (239)
T ss_pred cEEEEEEec-CCCchH---------HHHHHHHHHHhhhHHHHHHHcCCcHHHHHHH--HHHHhCCCHHHHHHHHHhCC-C
Confidence 999887665 333210 111111111 11111100000000 00013579999999999997 9
Q ss_pred EEeEEEEEe
Q 017702 291 TIEKMEKLS 299 (367)
Q Consensus 291 ~I~~lE~~~ 299 (367)
++.+...+.
T Consensus 219 ~~~~~~~~~ 227 (239)
T PRK00216 219 ERVRYRNLT 227 (239)
T ss_pred ceeeeeeee
Confidence 988776653
|
|
| >KOG2940 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.2e-07 Score=87.33 Aligned_cols=195 Identities=16% Similarity=0.266 Sum_probs=118.2
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHH---------HHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCcccc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAI---------ELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARK 131 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i---------~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~ 131 (367)
...-.++|+|||-|..+..+...-++.| .+.+++. ++| .++...+.-|=.
T Consensus 71 k~fp~a~diGcs~G~v~rhl~~e~vekli~~DtS~~M~~s~~~~----qdp-~i~~~~~v~DEE---------------- 129 (325)
T KOG2940|consen 71 KSFPTAFDIGCSLGAVKRHLRGEGVEKLIMMDTSYDMIKSCRDA----QDP-SIETSYFVGDEE---------------- 129 (325)
T ss_pred hhCcceeecccchhhhhHHHHhcchhheeeeecchHHHHHhhcc----CCC-ceEEEEEecchh----------------
Confidence 3467899999999999988875443322 1122211 122 122222222221
Q ss_pred ceeeccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHH
Q 017702 132 YFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNAR 211 (367)
Q Consensus 132 ~f~~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~R 211 (367)
|.. |-.+|+|+++|+-++||..++|. -...+
T Consensus 130 ---------~Ld--f~ens~DLiisSlslHW~NdLPg--------------------------------------~m~~c 160 (325)
T KOG2940|consen 130 ---------FLD--FKENSVDLIISSLSLHWTNDLPG--------------------------------------SMIQC 160 (325)
T ss_pred ---------ccc--ccccchhhhhhhhhhhhhccCch--------------------------------------HHHHH
Confidence 111 45699999999999999999995 35567
Q ss_pred HHhhccCceEEEEeecccCCCCCCCCCchhhHHHH-HHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCce
Q 017702 212 AEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNI-LGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNF 290 (367)
Q Consensus 212 a~EL~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~-l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F 290 (367)
...|||.|.|+.+++| ++. ++++ ..-.|.+|..+|-|+. -..| |-...++-.+|...| |
T Consensus 161 k~~lKPDg~Fiasmlg--gdT----------LyELR~slqLAelER~GGiSp-----hiSP--f~qvrDiG~LL~rAG-F 220 (325)
T KOG2940|consen 161 KLALKPDGLFIASMLG--GDT----------LYELRCSLQLAELEREGGISP-----HISP--FTQVRDIGNLLTRAG-F 220 (325)
T ss_pred HHhcCCCccchhHHhc--ccc----------HHHHHHHhhHHHHHhccCCCC-----CcCh--hhhhhhhhhHHhhcC-c
Confidence 7899999999999999 331 2331 2334668888888763 1222 335677888888887 8
Q ss_pred EEeEEEEEecCCCCCCHHHHHHhHHhhhhh--hhh--hccCHHHHHHHHHHHHHHHHhh
Q 017702 291 TIEKMEKLSQPRRRITANEYASGIRAGIDG--LIK--KHFGDEFVDEIFNYFTTKVEEN 345 (367)
Q Consensus 291 ~I~~lE~~~~p~~~~~~~~v~~~iRa~~~~--~l~--~~~~~~~~de~f~ry~~~~~~~ 345 (367)
....+.+-+..-.+...-.+...+++.++. .+. +++.++.+-.--.-|.+.++..
T Consensus 221 ~m~tvDtDEi~v~Yp~mfeLm~dLq~MgEsn~~~~Rn~~l~Ret~vAaaAiY~smya~e 279 (325)
T KOG2940|consen 221 SMLTVDTDEIVVGYPRMFELMEDLQGMGESNAALNRNAILNRETMVAAAAIYQSMYATE 279 (325)
T ss_pred ccceecccceeecCchHHHHHHHHHhhcccchhhccCccccHHHHHHHHHHHHHHhcCC
Confidence 776654432221122334556667776642 222 3556666666566666666544
|
|
| >PLN02490 MPBQ/MSBQ methyltransferase | Back alignment and domain information |
|---|
Probab=98.69 E-value=2.2e-07 Score=91.60 Aligned_cols=145 Identities=19% Similarity=0.211 Sum_probs=89.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCccc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSF 141 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SF 141 (367)
...+|+|+|||+|..++.+.+.. + ..+++..|+..+-....-+.....+--+ +.++.
T Consensus 113 ~~~~VLDLGcGtG~~~l~La~~~-----------------~---~~~VtgVD~S~~mL~~A~~k~~~~~i~~---i~gD~ 169 (340)
T PLN02490 113 RNLKVVDVGGGTGFTTLGIVKHV-----------------D---AKNVTILDQSPHQLAKAKQKEPLKECKI---IEGDA 169 (340)
T ss_pred CCCEEEEEecCCcHHHHHHHHHC-----------------C---CCEEEEEECCHHHHHHHHHhhhccCCeE---EeccH
Confidence 34799999999999888765322 1 2367778875433222111111111123 33344
Q ss_pred cccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceE
Q 017702 142 HSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLM 221 (367)
Q Consensus 142 y~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~l 221 (367)
...-++++++|+++|+.++|++.+ ....|+.-.+-|+|||++
T Consensus 170 e~lp~~~~sFDvVIs~~~L~~~~d--------------------------------------~~~~L~e~~rvLkPGG~L 211 (340)
T PLN02490 170 EDLPFPTDYADRYVSAGSIEYWPD--------------------------------------PQRGIKEAYRVLKIGGKA 211 (340)
T ss_pred HhCCCCCCceeEEEEcChhhhCCC--------------------------------------HHHHHHHHHHhcCCCcEE
Confidence 444567899999999999998542 124688888999999999
Q ss_pred EEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEE
Q 017702 222 VLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKL 298 (367)
Q Consensus 222 vl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~ 298 (367)
++.... .++. + +...+.+ .-..+++.+|+.+++++.| |+..+++..
T Consensus 212 vIi~~~-~p~~-----------~--~~r~~~~----------------~~~~~~t~eEl~~lL~~aG-F~~V~i~~i 257 (340)
T PLN02490 212 CLIGPV-HPTF-----------W--LSRFFAD----------------VWMLFPKEEEYIEWFTKAG-FKDVKLKRI 257 (340)
T ss_pred EEEEec-Ccch-----------h--HHHHhhh----------------hhccCCCHHHHHHHHHHCC-CeEEEEEEc
Confidence 876443 2210 0 0000000 0112579999999999997 988777654
|
|
| >TIGR01934 MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis methyltransferases | Back alignment and domain information |
|---|
Probab=98.69 E-value=6.1e-07 Score=81.85 Aligned_cols=165 Identities=18% Similarity=0.241 Sum_probs=93.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC-ccccceeeccCcc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP-HARKYFAAGLPGS 140 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~-~~~~~f~~gvp~S 140 (367)
+..+|+|+|||+|..+..+.... .+ ..+++.-|....-....-+.+. ..+-.|.. ++
T Consensus 39 ~~~~vldiG~G~G~~~~~~~~~~----------------~~---~~~~~~iD~~~~~~~~~~~~~~~~~~i~~~~---~d 96 (223)
T TIGR01934 39 KGQKVLDVACGTGDLAIELAKSA----------------PD---RGKVTGVDFSSEMLEVAKKKSELPLNIEFIQ---AD 96 (223)
T ss_pred CCCeEEEeCCCCChhHHHHHHhc----------------CC---CceEEEEECCHHHHHHHHHHhccCCCceEEe---cc
Confidence 45799999999999888775332 01 1357777764321111111111 11112222 33
Q ss_pred ccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCce
Q 017702 141 FHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGL 220 (367)
Q Consensus 141 Fy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~ 220 (367)
+.+..++++++|+++++..+|+..+ ...+|+...+.|+|||+
T Consensus 97 ~~~~~~~~~~~D~i~~~~~~~~~~~--------------------------------------~~~~l~~~~~~L~~gG~ 138 (223)
T TIGR01934 97 AEALPFEDNSFDAVTIAFGLRNVTD--------------------------------------IQKALREMYRVLKPGGR 138 (223)
T ss_pred hhcCCCCCCcEEEEEEeeeeCCccc--------------------------------------HHHHHHHHHHHcCCCcE
Confidence 4454567789999999999998543 33588899999999999
Q ss_pred EEEEeecccCCCCCCCCCchhhHHHHHHHHHHH-HHH--cCCCCHhhhhccC----CCcccCCHHHHHHHHHhCCceEEe
Q 017702 221 MVLILAAVVPDGIPLSNSYVGVFNNILGSCFND-LAK--MGVLSEEKVDSFN----LPTYNATPKELEAIIRTNGNFTIE 293 (367)
Q Consensus 221 lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~-m~~--eG~i~~~~~d~f~----~P~y~~s~eE~~~~l~~~g~F~I~ 293 (367)
+++.... .+... . +..+.+.+.. |.. .+..+.. .+.+. ...-+++.+|+++++++.| |++.
T Consensus 139 l~~~~~~-~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~aG-f~~~ 206 (223)
T TIGR01934 139 LVILEFS-KPANA--------L-LKKFYKFYLKNVLPSIGGLISKN-AEAYTYLPESIRAFPSQEELAAMLKEAG-FEEV 206 (223)
T ss_pred EEEEEec-CCCch--------h-hHHHHHHHHHHhhhhhhhhhcCC-chhhHHHHHHHHhCCCHHHHHHHHHHcC-Cccc
Confidence 9987654 33211 1 1212222211 110 0101000 01110 0112578999999999997 9887
Q ss_pred EEEEE
Q 017702 294 KMEKL 298 (367)
Q Consensus 294 ~lE~~ 298 (367)
..+..
T Consensus 207 ~~~~~ 211 (223)
T TIGR01934 207 RYRSL 211 (223)
T ss_pred eeeee
Confidence 77654
|
Note that a number of non-orthologous genes which are members of pfam03737 have been erroneously annotated as MenG methyltransferases. |
| >TIGR00477 tehB tellurite resistance protein TehB | Back alignment and domain information |
|---|
Probab=98.63 E-value=7.4e-07 Score=81.02 Aligned_cols=136 Identities=17% Similarity=0.239 Sum_probs=81.0
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCcc---ccceeeccCc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHA---RKYFAAGLPG 139 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~---~~~f~~gvp~ 139 (367)
+.+|+|+|||+|.+++.+.+. ..+|+--|+..+--. ..+..... .-.+..+.
T Consensus 31 ~~~vLDiGcG~G~~a~~la~~----------------------g~~V~~iD~s~~~l~-~a~~~~~~~~~~v~~~~~d-- 85 (195)
T TIGR00477 31 PCKTLDLGCGQGRNSLYLSLA----------------------GYDVRAWDHNPASIA-SVLDMKARENLPLRTDAYD-- 85 (195)
T ss_pred CCcEEEeCCCCCHHHHHHHHC----------------------CCeEEEEECCHHHHH-HHHHHHHHhCCCceeEecc--
Confidence 479999999999999988621 124666677532211 11111000 00111111
Q ss_pred cccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 140 SFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
. ....+++++|+++|+.++||++. .++..+++..++-|+|||
T Consensus 86 -~-~~~~~~~~fD~I~~~~~~~~~~~------------------------------------~~~~~~l~~~~~~LkpgG 127 (195)
T TIGR00477 86 -I-NAAALNEDYDFIFSTVVFMFLQA------------------------------------GRVPEIIANMQAHTRPGG 127 (195)
T ss_pred -c-hhccccCCCCEEEEecccccCCH------------------------------------HHHHHHHHHHHHHhCCCc
Confidence 1 11123468999999999999652 255678999999999999
Q ss_pred eEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEE
Q 017702 220 LMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEK 297 (367)
Q Consensus 220 ~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~ 297 (367)
++++...- ..+..+ .| ..+-|-.+++|+++.+.. |++.+.+.
T Consensus 128 ~lli~~~~-~~~~~~----------------------~~----------~~~~~~~~~~el~~~f~~---~~~~~~~e 169 (195)
T TIGR00477 128 YNLIVAAM-DTADYP----------------------CH----------MPFSFTFKEDELRQYYAD---WELLKYNE 169 (195)
T ss_pred EEEEEEec-ccCCCC----------------------CC----------CCcCccCCHHHHHHHhCC---CeEEEeec
Confidence 96655433 222110 01 112356789999998853 88887763
|
Part of a tellurite-reducing operon tehA and tehB |
| >PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.59 E-value=6e-07 Score=85.48 Aligned_cols=151 Identities=16% Similarity=0.195 Sum_probs=87.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhc---CCccccceeeccC
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKS---LPHARKYFAAGLP 138 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~---l~~~~~~f~~gvp 138 (367)
..-+|+|+|||+|..++.+.... .+ .-+|+--|...+-....-+. ....+-.|..+
T Consensus 77 ~g~~VLDiG~G~G~~~~~~a~~~----------------g~---~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~~-- 135 (272)
T PRK11873 77 PGETVLDLGSGGGFDCFLAARRV----------------GP---TGKVIGVDMTPEMLAKARANARKAGYTNVEFRLG-- 135 (272)
T ss_pred CCCEEEEeCCCCCHHHHHHHHHh----------------CC---CCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEEc--
Confidence 45799999999998877554222 11 22577777753221111111 11111123333
Q ss_pred ccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccC
Q 017702 139 GSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPG 218 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 218 (367)
++..--+|++++|+++|+.++||..+ ....|+.-.+-|+||
T Consensus 136 -d~~~l~~~~~~fD~Vi~~~v~~~~~d--------------------------------------~~~~l~~~~r~LkpG 176 (272)
T PRK11873 136 -EIEALPVADNSVDVIISNCVINLSPD--------------------------------------KERVFKEAFRVLKPG 176 (272)
T ss_pred -chhhCCCCCCceeEEEEcCcccCCCC--------------------------------------HHHHHHHHHHHcCCC
Confidence 33333457889999999999998432 224677777889999
Q ss_pred ceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEE
Q 017702 219 GLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEK 297 (367)
Q Consensus 219 G~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~ 297 (367)
|+|++.-.. .....+ +.+...+. +.. |. .....+.+|+.+++++.| |...++..
T Consensus 177 G~l~i~~~~-~~~~~~----------~~~~~~~~-~~~-~~-----------~~~~~~~~e~~~~l~~aG-f~~v~i~~ 230 (272)
T PRK11873 177 GRFAISDVV-LRGELP----------EEIRNDAE-LYA-GC-----------VAGALQEEEYLAMLAEAG-FVDITIQP 230 (272)
T ss_pred cEEEEEEee-ccCCCC----------HHHHHhHH-HHh-cc-----------ccCCCCHHHHHHHHHHCC-CCceEEEe
Confidence 999997654 222111 11211111 110 11 112457899999999987 88776644
|
|
| >PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.9e-07 Score=75.05 Aligned_cols=95 Identities=20% Similarity=0.272 Sum_probs=61.9
Q ss_pred ceEEeeecCCCCcccHHHHH--------------HHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc
Q 017702 63 PFKIADLGCSVGPNTLLAVQ--------------NIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH 128 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~--------------~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~ 128 (367)
.-+|+|+|||+|..++.+.+ ..++..+++...... .+ .++++..|+ ..+
T Consensus 2 ~~~vLDlGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~---~~---~i~~~~~d~-~~~---------- 64 (112)
T PF12847_consen 2 GGRVLDLGCGTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGL---SD---RITFVQGDA-EFD---------- 64 (112)
T ss_dssp TCEEEEETTTTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTT---TT---TEEEEESCC-HGG----------
T ss_pred CCEEEEEcCcCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCC---CC---CeEEEECcc-ccC----------
Confidence 36899999999999999987 344444444321111 12 344555444 111
Q ss_pred cccceeeccCccccccCCCCCceeEEEecc-ccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHH
Q 017702 129 ARKYFAAGLPGSFHSRLFPRSSIHFVHTSY-ALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESF 207 (367)
Q Consensus 129 ~~~~f~~gvp~SFy~~l~P~~svd~~~S~~-alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~f 207 (367)
.-....+|++++.. ++|++-.. .+...+
T Consensus 65 ----------------~~~~~~~D~v~~~~~~~~~~~~~-----------------------------------~~~~~~ 93 (112)
T PF12847_consen 65 ----------------PDFLEPFDLVICSGFTLHFLLPL-----------------------------------DERRRV 93 (112)
T ss_dssp ----------------TTTSSCEEEEEECSGSGGGCCHH-----------------------------------HHHHHH
T ss_pred ----------------cccCCCCCEEEECCCccccccch-----------------------------------hHHHHH
Confidence 11123499999999 77753311 366778
Q ss_pred HHHHHHhhccCceEEEEe
Q 017702 208 LNARAEELVPGGLMVLIL 225 (367)
Q Consensus 208 L~~Ra~EL~pGG~lvl~~ 225 (367)
|+...+-|+|||+|++..
T Consensus 94 l~~~~~~L~pgG~lvi~~ 111 (112)
T PF12847_consen 94 LERIRRLLKPGGRLVINT 111 (112)
T ss_dssp HHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHhcCCCcEEEEEE
Confidence 999999999999999874
|
... |
| >PF03848 TehB: Tellurite resistance protein TehB; InterPro: IPR015985 Tellurite resistance protein TehB is part of a tellurite-reducing operon tehA and tehB | Back alignment and domain information |
|---|
Probab=98.56 E-value=7e-07 Score=81.11 Aligned_cols=128 Identities=20% Similarity=0.296 Sum_probs=77.5
Q ss_pred CceEEeeecCCCCcccHHHHH------------HHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCcc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQ------------NIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHA 129 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~------------~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~ 129 (367)
++.+++|+|||.|.||+-+.+ ..++.+.+.-...+ ++|+...-|+. +
T Consensus 30 ~~g~~LDlgcG~GRNalyLA~~G~~VtAvD~s~~al~~l~~~a~~~~--------l~i~~~~~Dl~--~----------- 88 (192)
T PF03848_consen 30 KPGKALDLGCGEGRNALYLASQGFDVTAVDISPVALEKLQRLAEEEG--------LDIRTRVADLN--D----------- 88 (192)
T ss_dssp -SSEEEEES-TTSHHHHHHHHTT-EEEEEESSHHHHHHHHHHHHHTT---------TEEEEE-BGC--C-----------
T ss_pred CCCcEEEcCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHHHhhcC--------ceeEEEEecch--h-----------
Confidence 467999999999999999986 33444433222211 13455555552 1
Q ss_pred ccceeeccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHH
Q 017702 130 RKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLN 209 (367)
Q Consensus 130 ~~~f~~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~ 209 (367)
.-++..+|+|+|..++|.|.. + .+..+++
T Consensus 89 ---------------~~~~~~yD~I~st~v~~fL~~--~----------------------------------~~~~i~~ 117 (192)
T PF03848_consen 89 ---------------FDFPEEYDFIVSTVVFMFLQR--E----------------------------------LRPQIIE 117 (192)
T ss_dssp ---------------BS-TTTEEEEEEESSGGGS-G--G----------------------------------GHHHHHH
T ss_pred ---------------ccccCCcCEEEEEEEeccCCH--H----------------------------------HHHHHHH
Confidence 112368999999999999772 1 3446888
Q ss_pred HHHHhhccCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCc
Q 017702 210 ARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGN 289 (367)
Q Consensus 210 ~Ra~EL~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~ 289 (367)
...+.++|||+++++.+- ..+..+. ..+ |-+...++|++.....
T Consensus 118 ~m~~~~~pGG~~li~~~~-~~~d~p~-------------------------------~~~-~~f~~~~~EL~~~y~d--- 161 (192)
T PF03848_consen 118 NMKAATKPGGYNLIVTFM-ETPDYPC-------------------------------PSP-FPFLLKPGELREYYAD--- 161 (192)
T ss_dssp HHHHTEEEEEEEEEEEEB---SSS---------------------------------SS---S--B-TTHHHHHTTT---
T ss_pred HHHhhcCCcEEEEEEEec-ccCCCCC-------------------------------CCC-CCcccCHHHHHHHhCC---
Confidence 889999999999987664 2211110 012 2234578899988763
Q ss_pred eEEeEEEE
Q 017702 290 FTIEKMEK 297 (367)
Q Consensus 290 F~I~~lE~ 297 (367)
|+|.+.++
T Consensus 162 W~il~y~E 169 (192)
T PF03848_consen 162 WEILKYNE 169 (192)
T ss_dssp SEEEEEEE
T ss_pred CeEEEEEc
Confidence 99988765
|
When present in high copy number, TehB is responsible for potassium tellurite resistance, probably by increasing the reduction rate of tellurite to metallic tellurium within the bacterium. TehB is a cytoplasmic protein which possesses three conserved motifs (I, II, and III) found in S-adenosyl-L-methionine (SAM)-dependent non-nucleic acid methyltransferases []. Conformational changes in TehB are observed upon binding of both tellurite and SAM, suggesting that TehB utilises a methyltransferase activity in the detoxification of tellurite. This entry represents the methyltransferase domain found in all TehB proteins.; PDB: 2KW5_A 3MER_B 3M70_A 2I6G_A 4DQ0_D 2XVA_B 2XVM_A. |
| >PF13847 Methyltransf_31: Methyltransferase domain; PDB: 3T0I_B 3SVZ_B 3SXJ_A 3F4K_A 3GU3_B 2GH1_A 1R8Y_E 1R8X_B 2B3T_A 1T43_A | Back alignment and domain information |
|---|
Probab=98.55 E-value=4.1e-07 Score=79.01 Aligned_cols=107 Identities=21% Similarity=0.284 Sum_probs=73.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCcc---chHHHhhcCCccccceeeccC
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDN---DFNTLFKSLPHARKYFAAGLP 138 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~N---DFn~lf~~l~~~~~~f~~gvp 138 (367)
+..+|+|+|||+|..+..+.+.. .| ..+++--|+... -.+..++.....+--|..+.-
T Consensus 3 ~~~~iLDlGcG~G~~~~~l~~~~----------------~~---~~~i~gvD~s~~~i~~a~~~~~~~~~~ni~~~~~d~ 63 (152)
T PF13847_consen 3 SNKKILDLGCGTGRLLIQLAKEL----------------NP---GAKIIGVDISEEMIEYAKKRAKELGLDNIEFIQGDI 63 (152)
T ss_dssp TTSEEEEET-TTSHHHHHHHHHS----------------TT---TSEEEEEESSHHHHHHHHHHHHHTTSTTEEEEESBT
T ss_pred CCCEEEEecCcCcHHHHHHHHhc----------------CC---CCEEEEEECcHHHHHHhhcccccccccccceEEeeh
Confidence 45899999999999999887421 12 236788888642 233344444333344566553
Q ss_pred ccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccC
Q 017702 139 GSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPG 218 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 218 (367)
.+ ..+.++ +.+|+++++.++||+. |...+|+.-.+-|++|
T Consensus 64 ~~-l~~~~~-~~~D~I~~~~~l~~~~--------------------------------------~~~~~l~~~~~~lk~~ 103 (152)
T PF13847_consen 64 ED-LPQELE-EKFDIIISNGVLHHFP--------------------------------------DPEKVLKNIIRLLKPG 103 (152)
T ss_dssp TC-GCGCSS-TTEEEEEEESTGGGTS--------------------------------------HHHHHHHHHHHHEEEE
T ss_pred hc-cccccC-CCeeEEEEcCchhhcc--------------------------------------CHHHHHHHHHHHcCCC
Confidence 33 222244 8999999999999955 4456888889999999
Q ss_pred ceEEEEeec
Q 017702 219 GLMVLILAA 227 (367)
Q Consensus 219 G~lvl~~~g 227 (367)
|.+++....
T Consensus 104 G~~i~~~~~ 112 (152)
T PF13847_consen 104 GILIISDPN 112 (152)
T ss_dssp EEEEEEEEE
T ss_pred cEEEEEECC
Confidence 999988875
|
... |
| >PRK12335 tellurite resistance protein TehB; Provisional | Back alignment and domain information |
|---|
Probab=98.54 E-value=1e-06 Score=84.79 Aligned_cols=134 Identities=19% Similarity=0.308 Sum_probs=80.8
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHH---HhhcCCccccceeeccCcc
Q 017702 64 FKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNT---LFKSLPHARKYFAAGLPGS 140 (367)
Q Consensus 64 ~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~---lf~~l~~~~~~f~~gvp~S 140 (367)
-+|+|+|||+|.|++.+.+. ..+|+--|....--.. ..+.... +--+..+ .
T Consensus 122 ~~vLDlGcG~G~~~~~la~~----------------------g~~V~avD~s~~ai~~~~~~~~~~~l-~v~~~~~---D 175 (287)
T PRK12335 122 GKALDLGCGQGRNSLYLALL----------------------GFDVTAVDINQQSLENLQEIAEKENL-NIRTGLY---D 175 (287)
T ss_pred CCEEEeCCCCCHHHHHHHHC----------------------CCEEEEEECCHHHHHHHHHHHHHcCC-ceEEEEe---c
Confidence 49999999999999887631 1245555554321111 1111000 0001111 1
Q ss_pred ccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCce
Q 017702 141 FHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGL 220 (367)
Q Consensus 141 Fy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~ 220 (367)
.- ..-+++++|+|+|+.++|+++. .++..+|+...+-|+|||+
T Consensus 176 ~~-~~~~~~~fD~I~~~~vl~~l~~------------------------------------~~~~~~l~~~~~~LkpgG~ 218 (287)
T PRK12335 176 IN-SASIQEEYDFILSTVVLMFLNR------------------------------------ERIPAIIKNMQEHTNPGGY 218 (287)
T ss_pred hh-cccccCCccEEEEcchhhhCCH------------------------------------HHHHHHHHHHHHhcCCCcE
Confidence 11 1123678999999999999752 2566799999999999999
Q ss_pred EEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCC-cccCCHHHHHHHHHhCCceEEeEEEE
Q 017702 221 MVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLP-TYNATPKELEAIIRTNGNFTIEKMEK 297 (367)
Q Consensus 221 lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P-~y~~s~eE~~~~l~~~g~F~I~~lE~ 297 (367)
+++.... ..+..+ ...| -+..+.+|+++.+.. |+|.+.++
T Consensus 219 ~l~v~~~-~~~~~~---------------------------------~~~p~~~~~~~~el~~~~~~---~~i~~~~e 259 (287)
T PRK12335 219 NLIVCAM-DTEDYP---------------------------------CPMPFSFTFKEGELKDYYQD---WEIVKYNE 259 (287)
T ss_pred EEEEEec-ccccCC---------------------------------CCCCCCcccCHHHHHHHhCC---CEEEEEec
Confidence 7775543 221110 1123 346789999998864 99988754
|
|
| >PRK06202 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=2.8e-06 Score=78.99 Aligned_cols=163 Identities=15% Similarity=0.177 Sum_probs=88.3
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCcc-ccceeeccCc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHA-RKYFAAGLPG 139 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~-~~~f~~gvp~ 139 (367)
.+..+|+|+|||+|.++..+.... ++. .+ ..+++-.|+..+- -...+..... +--+..+...
T Consensus 59 ~~~~~iLDlGcG~G~~~~~L~~~~--------~~~-----g~---~~~v~gvD~s~~~-l~~a~~~~~~~~~~~~~~~~~ 121 (232)
T PRK06202 59 DRPLTLLDIGCGGGDLAIDLARWA--------RRD-----GL---RLEVTAIDPDPRA-VAFARANPRRPGVTFRQAVSD 121 (232)
T ss_pred CCCcEEEEeccCCCHHHHHHHHHH--------HhC-----CC---CcEEEEEcCCHHH-HHHHHhccccCCCeEEEEecc
Confidence 346799999999999888765332 111 12 3478888886533 2222222111 1112222211
Q ss_pred cccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 140 SFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
.+ -++++++|+++|+.++||+.+. ++..+|+.-++-++ |
T Consensus 122 ~l---~~~~~~fD~V~~~~~lhh~~d~------------------------------------~~~~~l~~~~r~~~--~ 160 (232)
T PRK06202 122 EL---VAEGERFDVVTSNHFLHHLDDA------------------------------------EVVRLLADSAALAR--R 160 (232)
T ss_pred cc---cccCCCccEEEECCeeecCChH------------------------------------HHHHHHHHHHHhcC--e
Confidence 11 1267899999999999997531 23456766666555 5
Q ss_pred eEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcC-CCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEE
Q 017702 220 LMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMG-VLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKL 298 (367)
Q Consensus 220 ~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG-~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~ 298 (367)
.+++.-+. ++.. .+... .........| .+.++. ...-.-+++.+|+.+++++ | |++.+...|
T Consensus 161 ~~~i~dl~-~~~~----------~~~~~-~~~~~~~~~~~~~~~d~---~~s~~~~~~~~el~~ll~~-G-f~~~~~~~~ 223 (232)
T PRK06202 161 LVLHNDLI-RSRL----------AYALF-WAGTRLLSRSSFVHTDG---LLSVRRSYTPAELAALAPQ-G-WRVERQWPF 223 (232)
T ss_pred eEEEeccc-cCHH----------HHHHH-HHHHHHhccCceeeccc---hHHHHhhcCHHHHHHHhhC-C-CeEEeccce
Confidence 55555555 3321 01110 1111111112 121111 1111237899999999998 5 999876554
|
|
| >PF08242 Methyltransf_12: Methyltransferase domain; InterPro: IPR013217 Methyl transfer from the ubiquitous donor S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.3e-07 Score=75.92 Aligned_cols=96 Identities=23% Similarity=0.255 Sum_probs=49.3
Q ss_pred eeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHH---HhhcCCccccceeeccCccccc
Q 017702 67 ADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNT---LFKSLPHARKYFAAGLPGSFHS 143 (367)
Q Consensus 67 aD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~---lf~~l~~~~~~f~~gvp~SFy~ 143 (367)
+|+|||+|..+..++... | ..+++..|....-... -+....................
T Consensus 1 LdiGcG~G~~~~~l~~~~-----------------~---~~~~~~~D~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~ 60 (99)
T PF08242_consen 1 LDIGCGTGRLLRALLEEL-----------------P---DARYTGVDISPSMLERARERLAELGNDNFERLRFDVLDLFD 60 (99)
T ss_dssp -EESTTTS-TTTTHHHHC---------------------EEEEEEEESSSSTTSTTCCCHHHCT---EEEEE--SSS---
T ss_pred CEeCccChHHHHHHHHhC-----------------C---CCEEEEEECCHHHHHHHHHHhhhcCCcceeEEEeecCChhh
Confidence 699999999999887443 2 4578888887533211 1111111111122222222111
Q ss_pred cCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceE
Q 017702 144 RLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLM 221 (367)
Q Consensus 144 ~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~l 221 (367)
. .+++++|+|+++.++||+. |+..+|+.-++-|+|||+|
T Consensus 61 ~-~~~~~fD~V~~~~vl~~l~--------------------------------------~~~~~l~~~~~~L~pgG~l 99 (99)
T PF08242_consen 61 Y-DPPESFDLVVASNVLHHLE--------------------------------------DIEAVLRNIYRLLKPGGIL 99 (99)
T ss_dssp C-CC----SEEEEE-TTS--S---------------------------------------HHHHHHHHTTT-TSS-EE
T ss_pred c-ccccccceehhhhhHhhhh--------------------------------------hHHHHHHHHHHHcCCCCCC
Confidence 1 1227999999999999982 5567999999999999986
|
The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] Fatty acid synthase (2.3.1.85 from EC), a biosynthetic enzyme catalysing the formation of long-chain fatty acids Glycine N-methyltransferase (2.1.1.20 from EC) which catalyses the SAM-dependent methylation of glycine to form sarcosine and may play a role in regulating the methylation potential of the cell [] Enniatin synthetase, involved in non-ribosomal biosynthesis of cyclohexadepsipeptidase, enniatin [] Histamine N-methyltransferase (2.1.1.8 from EC), a SAM-dependent histamine-inactivating enzyme [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ].; PDB: 2VZ8_A 2VZ9_A. |
| >PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4) | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.9e-05 Score=75.81 Aligned_cols=92 Identities=22% Similarity=0.313 Sum_probs=54.6
Q ss_pred hhHHHHHHHHHHhhccCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCc-ccCCHHHH
Q 017702 202 NDMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPT-YNATPKEL 280 (367)
Q Consensus 202 ~D~~~fL~~Ra~EL~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~-y~~s~eE~ 280 (367)
+++..|++...+-|+|||++++...+ ..+... . .+.-.+.+-+..+.+|- +.|+.+++
T Consensus 143 ~~~~~~f~~~~~~LkpgG~~~lq~i~-~~~~~~----------~----------~~~~~~~~~i~kyiFPgg~lps~~~~ 201 (273)
T PF02353_consen 143 KNYPAFFRKISRLLKPGGRLVLQTIT-HRDPPY----------H----------AERRSSSDFIRKYIFPGGYLPSLSEI 201 (273)
T ss_dssp GGHHHHHHHHHHHSETTEEEEEEEEE-E--HHH----------H----------HCTTCCCHHHHHHTSTTS---BHHHH
T ss_pred hHHHHHHHHHHHhcCCCcEEEEEecc-cccccc----------h----------hhcCCCceEEEEeeCCCCCCCCHHHH
Confidence 36778999999999999999999887 443210 0 00000001122233343 56899999
Q ss_pred HHHHHhCCceEEeEEEEEecCCCCCCHHHHHHhHHhhhhhhhh
Q 017702 281 EAIIRTNGNFTIEKMEKLSQPRRRITANEYASGIRAGIDGLIK 323 (367)
Q Consensus 281 ~~~l~~~g~F~I~~lE~~~~p~~~~~~~~v~~~iRa~~~~~l~ 323 (367)
...+++.| |+|...+.+ +..++..++.|...+.+
T Consensus 202 ~~~~~~~~-l~v~~~~~~--------~~hY~~Tl~~W~~~f~~ 235 (273)
T PF02353_consen 202 LRAAEDAG-LEVEDVENL--------GRHYARTLRAWRENFDA 235 (273)
T ss_dssp HHHHHHTT--EEEEEEE---------HHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCC-EEEEEEEEc--------CcCHHHHHHHHHHHHHH
Confidence 99888876 999888766 24555556666555554
|
All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: |
| >TIGR02716 C20_methyl_CrtF C-20 methyltransferase BchU | Back alignment and domain information |
|---|
Probab=98.40 E-value=9.8e-06 Score=78.61 Aligned_cols=154 Identities=12% Similarity=0.086 Sum_probs=88.4
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhh-cCCcc-ccceeeccC
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFK-SLPHA-RKYFAAGLP 138 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~-~l~~~-~~~f~~gvp 138 (367)
.+..+|+|+|||+|..++.+.+.. | ..+++.-|+|. .-...+ .+... ..--+..++
T Consensus 148 ~~~~~vlDiG~G~G~~~~~~~~~~-----------------p---~~~~~~~D~~~--~~~~a~~~~~~~gl~~rv~~~~ 205 (306)
T TIGR02716 148 DGVKKMIDVGGGIGDISAAMLKHF-----------------P---ELDSTILNLPG--AIDLVNENAAEKGVADRMRGIA 205 (306)
T ss_pred CCCCEEEEeCCchhHHHHHHHHHC-----------------C---CCEEEEEecHH--HHHHHHHHHHhCCccceEEEEe
Confidence 345799999999998888776322 3 45677779862 111111 11110 000133456
Q ss_pred ccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccC
Q 017702 139 GSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPG 218 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 218 (367)
++|++.-+|+ .|+++.+..+|-..+ .+-..+|+.-++.|+||
T Consensus 206 ~d~~~~~~~~--~D~v~~~~~lh~~~~------------------------------------~~~~~il~~~~~~L~pg 247 (306)
T TIGR02716 206 VDIYKESYPE--ADAVLFCRILYSANE------------------------------------QLSTIMCKKAFDAMRSG 247 (306)
T ss_pred cCccCCCCCC--CCEEEeEhhhhcCCh------------------------------------HHHHHHHHHHHHhcCCC
Confidence 6788655664 499988888883221 12235888899999999
Q ss_pred ceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeE
Q 017702 219 GLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEK 294 (367)
Q Consensus 219 G~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~ 294 (367)
|++++.=.. .++... ..+..+...+. .-|... .+..+++.+||.+++++.| |+..+
T Consensus 248 G~l~i~d~~-~~~~~~-------~~~~~~~~~~~---~~~~~~--------~~~~~~~~~e~~~ll~~aG-f~~v~ 303 (306)
T TIGR02716 248 GRLLILDMV-IDDPEN-------PNFDYLSHYIL---GAGMPF--------SVLGFKEQARYKEILESLG-YKDVT 303 (306)
T ss_pred CEEEEEEec-cCCCCC-------chhhHHHHHHH---Hccccc--------ccccCCCHHHHHHHHHHcC-CCeeE
Confidence 999887543 222110 11122222211 112110 1123566899999999997 87544
|
Members of this protein family are the S-adenosylmethionine-depenedent C-20 methyltransferase BchU, part of the pathway of bacteriochlorophyll c production in photosynthetic green sulfur bacteria. The position modified by this enzyme represents the difference between bacteriochlorophylls c and d; strains lacking this protein can only produced bacteriochlorophyll d. |
| >COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.39 E-value=3.2e-05 Score=74.11 Aligned_cols=182 Identities=16% Similarity=0.206 Sum_probs=107.0
Q ss_pred CceEEeeecCCCCcccHHHHHHH-------------HHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNI-------------IEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH 128 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~i-------------i~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~ 128 (367)
+-.+|+|||||=|..++.+++.. .+..+++.+..+.+ . .++|.+-|.+ ||+.
T Consensus 72 ~G~~lLDiGCGWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~--~----~v~v~l~d~r--d~~e------- 136 (283)
T COG2230 72 PGMTLLDIGCGWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLE--D----NVEVRLQDYR--DFEE------- 136 (283)
T ss_pred CCCEEEEeCCChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCC--c----ccEEEecccc--cccc-------
Confidence 34899999999999999998754 22223333333221 1 3556666653 3222
Q ss_pred cccceeeccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHH
Q 017702 129 ARKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFL 208 (367)
Q Consensus 129 ~~~~f~~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL 208 (367)
.+|=|+|.=.++-+.. +.+..|+
T Consensus 137 ---------------------~fDrIvSvgmfEhvg~------------------------------------~~~~~ff 159 (283)
T COG2230 137 ---------------------PFDRIVSVGMFEHVGK------------------------------------ENYDDFF 159 (283)
T ss_pred ---------------------ccceeeehhhHHHhCc------------------------------------ccHHHHH
Confidence 2777888666665442 3566799
Q ss_pred HHHHHhhccCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCC
Q 017702 209 NARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNG 288 (367)
Q Consensus 209 ~~Ra~EL~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g 288 (367)
+.-.+-|+|||+|++-..+ .++.... . ...|. ...+..--+.|+..++....++.|
T Consensus 160 ~~~~~~L~~~G~~llh~I~-~~~~~~~---~--------~~~~i------------~~yiFPgG~lPs~~~i~~~~~~~~ 215 (283)
T COG2230 160 KKVYALLKPGGRMLLHSIT-GPDQEFR---R--------FPDFI------------DKYIFPGGELPSISEILELASEAG 215 (283)
T ss_pred HHHHhhcCCCceEEEEEec-CCCcccc---c--------chHHH------------HHhCCCCCcCCCHHHHHHHHHhcC
Confidence 9999999999999999998 5542110 0 00011 012233345789999999988886
Q ss_pred ceEEeEEEEEecCCCCCCHHHHHHhHHhhhhhhhhhccC---HHHHHHHHHHHHHHHHhhhhHH
Q 017702 289 NFTIEKMEKLSQPRRRITANEYASGIRAGIDGLIKKHFG---DEFVDEIFNYFTTKVEENYSII 349 (367)
Q Consensus 289 ~F~I~~lE~~~~p~~~~~~~~v~~~iRa~~~~~l~~~~~---~~~~de~f~ry~~~~~~~~~~~ 349 (367)
|.+...+.+.. .++..++.|.+.+-+ ++. ...-+.++..|+..++.--..+
T Consensus 216 -~~v~~~~~~~~--------hYa~Tl~~W~~~f~~-~~~~a~~~~~e~~~r~w~~yl~~~~~~F 269 (283)
T COG2230 216 -FVVLDVESLRP--------HYARTLRLWRERFEA-NRDEAIALYDERFYRMWELYLAACAAAF 269 (283)
T ss_pred -cEEehHhhhcH--------HHHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHHHHh
Confidence 98877665522 344444444444433 222 2233444555655555444433
|
|
| >PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.38 E-value=7e-07 Score=81.67 Aligned_cols=160 Identities=14% Similarity=0.139 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeE
Q 017702 29 TYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQ 108 (367)
Q Consensus 29 ~~Q~~~~~~~~~ll~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~ 108 (367)
.+|+.+.....|.+-........ .+ .....+|+|+|||+|..|..+.+.. | ..+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~VLDiGcGtG~~~~~la~~~-----------------p---~~~ 66 (202)
T PRK00121 13 KGQQRAIEELWPRLSPAPLDWAE--LF----GNDAPIHLEIGFGKGEFLVEMAKAN-----------------P---DIN 66 (202)
T ss_pred cchhhhhcccchhhcCCCCCHHH--Hc----CCCCCeEEEEccCCCHHHHHHHHHC-----------------C---Ccc
Confidence 45667777777777433222121 12 2246799999999999999876322 1 225
Q ss_pred EEEcCCCccchHHHhhcC---CccccceeeccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccc
Q 017702 109 VFLNDHSDNDFNTLFKSL---PHARKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQC 185 (367)
Q Consensus 109 v~~nDlp~NDFn~lf~~l---~~~~~~f~~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~ 185 (367)
|+-.|....--...-+.+ ...+-.|..+.--..+.+.++++++|.++++++.+|...... . +
T Consensus 67 v~gVD~s~~~i~~a~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~D~V~~~~~~p~~~~~~~-~----------~---- 131 (202)
T PRK00121 67 FIGIEVHEPGVGKALKKIEEEGLTNLRLLCGDAVEVLLDMFPDGSLDRIYLNFPDPWPKKRHH-K----------R---- 131 (202)
T ss_pred EEEEEechHHHHHHHHHHHHcCCCCEEEEecCHHHHHHHHcCccccceEEEECCCCCCCcccc-c----------c----
Confidence 666666543222222221 111222444432112334577899999999988888553210 0 0
Q ss_pred cCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCC
Q 017702 186 SESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVL 260 (367)
Q Consensus 186 ~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i 260 (367)
..+...||+.-++-|+|||.+++.... . +.+...+..|...|+-
T Consensus 132 ---------------~~~~~~~l~~i~~~LkpgG~l~i~~~~-~---------------~~~~~~~~~~~~~g~~ 175 (202)
T PRK00121 132 ---------------RLVQPEFLALYARKLKPGGEIHFATDW-E---------------GYAEYMLEVLSAEGGF 175 (202)
T ss_pred ---------------ccCCHHHHHHHHHHcCCCCEEEEEcCC-H---------------HHHHHHHHHHHhCccc
Confidence 002345888889999999999987754 1 3444556666666643
|
|
| >KOG1541 consensus Predicted protein carboxyl methylase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.37 E-value=3.2e-06 Score=77.58 Aligned_cols=138 Identities=22% Similarity=0.222 Sum_probs=86.2
Q ss_pred chHHHhhHH---HHHHHHHHHHHHHHHHHhhhcccccCCCCCCCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCC
Q 017702 22 YSYANNSTY---QRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNL 98 (367)
Q Consensus 22 ~sY~~nS~~---Q~~~~~~~~~ll~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~ 98 (367)
.-|.+||.+ |..+.+++++++. ++ .+++--|+|+|||||--+-.+-+
T Consensus 21 ~kYt~nsri~~IQ~em~eRaLELLa--------lp------~~~~~~iLDIGCGsGLSg~vL~~---------------- 70 (270)
T KOG1541|consen 21 PKYTQNSRIVLIQAEMAERALELLA--------LP------GPKSGLILDIGCGSGLSGSVLSD---------------- 70 (270)
T ss_pred hhccccceeeeehHHHHHHHHHHhh--------CC------CCCCcEEEEeccCCCcchheecc----------------
Confidence 368888876 6777776666653 22 44688999999999987665431
Q ss_pred CCCCCcceeEEEEcCCCccchHHHh-hcCCccccceeeccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCC
Q 017702 99 HQKPSALEFQVFLNDHSDNDFNTLF-KSLPHARKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPA 177 (367)
Q Consensus 99 ~~~p~~~e~~v~~nDlp~NDFn~lf-~~l~~~~~~f~~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~ 177 (367)
+ .-+++=-|..--.-..-. +.+. --+..++=| -+--|+++++|-++|-+|+|||-...+...+
T Consensus 71 ---~---Gh~wiGvDiSpsML~~a~~~e~e---gdlil~DMG--~GlpfrpGtFDg~ISISAvQWLcnA~~s~~~----- 134 (270)
T KOG1541|consen 71 ---S---GHQWIGVDISPSMLEQAVERELE---GDLILCDMG--EGLPFRPGTFDGVISISAVQWLCNADKSLHV----- 134 (270)
T ss_pred ---C---CceEEeecCCHHHHHHHHHhhhh---cCeeeeecC--CCCCCCCCccceEEEeeeeeeecccCccccC-----
Confidence 1 112333333211000000 0111 011111212 3456789999999999999998876543211
Q ss_pred CCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEEEEeec
Q 017702 178 WNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAA 227 (367)
Q Consensus 178 ~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g 227 (367)
=++.+..|+..-..-|++|++.|+.+.-
T Consensus 135 ----------------------P~~Rl~~FF~tLy~~l~rg~raV~QfYp 162 (270)
T KOG1541|consen 135 ----------------------PKKRLLRFFGTLYSCLKRGARAVLQFYP 162 (270)
T ss_pred ----------------------hHHHHHHHhhhhhhhhccCceeEEEecc
Confidence 1356778999999999999999999964
|
|
| >PRK11088 rrmA 23S rRNA methyltransferase A; Provisional | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.1e-05 Score=77.14 Aligned_cols=76 Identities=24% Similarity=0.290 Sum_probs=43.7
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCccc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSF 141 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SF 141 (367)
...+|+|+|||+|..+..+.+.+ .. .. ..+++-.|+..+--...-+..+ +-.|..+. .
T Consensus 85 ~~~~vLDiGcG~G~~~~~l~~~~--------~~------~~---~~~v~giD~s~~~l~~A~~~~~--~~~~~~~d---~ 142 (272)
T PRK11088 85 KATALLDIGCGEGYYTHALADAL--------PE------IT---TMQLFGLDISKVAIKYAAKRYP--QVTFCVAS---S 142 (272)
T ss_pred CCCeEEEECCcCCHHHHHHHHhc--------cc------cc---CCeEEEECCCHHHHHHHHHhCC--CCeEEEee---c
Confidence 34789999999999988876432 10 00 1257788876433222111111 11233332 3
Q ss_pred cccCCCCCceeEEEeccc
Q 017702 142 HSRLFPRSSIHFVHTSYA 159 (367)
Q Consensus 142 y~~l~P~~svd~~~S~~a 159 (367)
.+--++++++|+++|..+
T Consensus 143 ~~lp~~~~sfD~I~~~~~ 160 (272)
T PRK11088 143 HRLPFADQSLDAIIRIYA 160 (272)
T ss_pred ccCCCcCCceeEEEEecC
Confidence 333467899999998653
|
|
| >TIGR01983 UbiG ubiquinone biosynthesis O-methyltransferase | Back alignment and domain information |
|---|
Probab=98.35 E-value=8.1e-06 Score=75.02 Aligned_cols=157 Identities=16% Similarity=0.202 Sum_probs=84.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC---ccccceeeccC
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP---HARKYFAAGLP 138 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~---~~~~~f~~gvp 138 (367)
+..+|+|+|||+|..+..+.+. .+ .++..|+...-....-+.+. ..+-.|..+.
T Consensus 45 ~~~~vLdlG~G~G~~~~~l~~~-----------------~~-----~v~~iD~s~~~~~~a~~~~~~~~~~~~~~~~~d- 101 (224)
T TIGR01983 45 FGLRVLDVGCGGGLLSEPLARL-----------------GA-----NVTGIDASEENIEVAKLHAKKDPLLKIEYRCTS- 101 (224)
T ss_pred CCCeEEEECCCCCHHHHHHHhc-----------------CC-----eEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCC-
Confidence 4689999999999887765421 11 35566654322111111111 0011122222
Q ss_pred ccccccCC-CCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 139 GSFHSRLF-PRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 139 ~SFy~~l~-P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
+-+... +++++|+++++.++|+.. |...+|+...+-|+|
T Consensus 102 --~~~~~~~~~~~~D~i~~~~~l~~~~--------------------------------------~~~~~l~~~~~~L~~ 141 (224)
T TIGR01983 102 --VEDLAEKGAKSFDVVTCMEVLEHVP--------------------------------------DPQAFIRACAQLLKP 141 (224)
T ss_pred --HHHhhcCCCCCccEEEehhHHHhCC--------------------------------------CHHHHHHHHHHhcCC
Confidence 111122 247899999999988854 223578888889999
Q ss_pred CceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEE
Q 017702 218 GGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEK 297 (367)
Q Consensus 218 GG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~ 297 (367)
||.+++.... +.. .......+. .++. .+.... .......+.+.+++.+++++.| |+|..+..
T Consensus 142 gG~l~i~~~~-~~~--------~~~~~~~~~---~~~~-~~~~~~----~~~~~~~~~~~~~l~~~l~~~G-~~i~~~~~ 203 (224)
T TIGR01983 142 GGILFFSTIN-RTP--------KSYLLAIVG---AEYI-LRIVPK----GTHDWEKFIKPSELTSWLESAG-LRVKDVKG 203 (224)
T ss_pred CcEEEEEecC-CCc--------hHHHHHHHh---hhhh-hhcCCC----CcCChhhcCCHHHHHHHHHHcC-Ceeeeeee
Confidence 9999877654 211 000101000 0111 011110 0001112568899999999886 99988775
Q ss_pred Ee
Q 017702 298 LS 299 (367)
Q Consensus 298 ~~ 299 (367)
+.
T Consensus 204 ~~ 205 (224)
T TIGR01983 204 LV 205 (224)
T ss_pred EE
Confidence 43
|
This model represents an O-methyltransferase believed to act at two points in the ubiquinone biosynthetic pathway in bacteria (UbiG) and fungi (COQ3). A separate methylase (MenG/UbiE) catalyzes the single C-methylation step. The most commonly used names for genes in this family do not indicate whether this gene is an O-methyl, or C-methyl transferase. |
| >PLN02336 phosphoethanolamine N-methyltransferase | Back alignment and domain information |
|---|
Probab=98.27 E-value=4.3e-06 Score=85.91 Aligned_cols=103 Identities=17% Similarity=0.201 Sum_probs=64.2
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc--cccceeeccCcc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH--ARKYFAAGLPGS 140 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~--~~~~f~~gvp~S 140 (367)
..+|+|+|||+|.+|..+.+.. . +|+-.|....-...- +.... .+-.|..+.-..
T Consensus 38 ~~~vLDlGcG~G~~~~~la~~~---------------------~-~v~giD~s~~~l~~a-~~~~~~~~~i~~~~~d~~~ 94 (475)
T PLN02336 38 GKSVLELGAGIGRFTGELAKKA---------------------G-QVIALDFIESVIKKN-ESINGHYKNVKFMCADVTS 94 (475)
T ss_pred CCEEEEeCCCcCHHHHHHHhhC---------------------C-EEEEEeCCHHHHHHH-HHHhccCCceEEEEecccc
Confidence 3589999999999999876321 1 345555433211110 11110 112233333211
Q ss_pred ccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCce
Q 017702 141 FHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGL 220 (367)
Q Consensus 141 Fy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~ 220 (367)
. ..-+|++++|+|+|..++||+++ .++..+|+..++-|+|||+
T Consensus 95 ~-~~~~~~~~fD~I~~~~~l~~l~~------------------------------------~~~~~~l~~~~r~Lk~gG~ 137 (475)
T PLN02336 95 P-DLNISDGSVDLIFSNWLLMYLSD------------------------------------KEVENLAERMVKWLKVGGY 137 (475)
T ss_pred c-ccCCCCCCEEEEehhhhHHhCCH------------------------------------HHHHHHHHHHHHhcCCCeE
Confidence 1 12357899999999999999753 1456799999999999999
Q ss_pred EEEEe
Q 017702 221 MVLIL 225 (367)
Q Consensus 221 lvl~~ 225 (367)
|++.=
T Consensus 138 l~~~d 142 (475)
T PLN02336 138 IFFRE 142 (475)
T ss_pred EEEEe
Confidence 97753
|
|
| >TIGR02081 metW methionine biosynthesis protein MetW | Back alignment and domain information |
|---|
Probab=98.27 E-value=1.3e-05 Score=72.45 Aligned_cols=29 Identities=10% Similarity=0.023 Sum_probs=24.7
Q ss_pred cccCCHHHHHHHHHhCCceEEeEEEEEecC
Q 017702 272 TYNATPKELEAIIRTNGNFTIEKMEKLSQP 301 (367)
Q Consensus 272 ~y~~s~eE~~~~l~~~g~F~I~~lE~~~~p 301 (367)
..+++.+|+.+++++.| |++...+.+.+.
T Consensus 143 ~~~~s~~~~~~ll~~~G-f~v~~~~~~~~~ 171 (194)
T TIGR02081 143 IHFCTIADFEDLCGELN-LRILDRAAFDVD 171 (194)
T ss_pred cccCcHHHHHHHHHHCC-CEEEEEEEeccc
Confidence 45889999999999997 999998887543
|
This protein is found alongside MetX, of the enzyme that acylates homoserine as a first step toward methionine biosynthesis, in many species. It appears to act in methionine biosynthesis but is not fully characterized. |
| >TIGR02021 BchM-ChlM magnesium protoporphyrin O-methyltransferase | Back alignment and domain information |
|---|
Probab=98.27 E-value=4.7e-05 Score=70.08 Aligned_cols=30 Identities=20% Similarity=0.257 Sum_probs=24.8
Q ss_pred CCCcccCCHHHHHHHHHhCCceEEeEEEEEe
Q 017702 269 NLPTYNATPKELEAIIRTNGNFTIEKMEKLS 299 (367)
Q Consensus 269 ~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~~ 299 (367)
..++++++++|+.+++++.| |++...+...
T Consensus 179 ~~~~~~~~~~~~~~~l~~~G-f~v~~~~~~~ 208 (219)
T TIGR02021 179 ATSAYLHPMTDLERALGELG-WKIVREGLVS 208 (219)
T ss_pred ccceEEecHHHHHHHHHHcC-ceeeeeeccc
Confidence 35678899999999999997 9998876543
|
This model represents the S-adenosylmethionine-dependent O-methyltransferase responsible for methylation of magnesium protoporphyrin IX. This step is essentiasl for the biosynthesis of both chlorophyll and bacteriochlorophyll. This model encompasses two closely related clades, from cyanobacteria (and plants) where it is called ChlM and other photosynthetic bacteria where it is known as BchM. |
| >PRK05785 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.27 E-value=1.3e-05 Score=74.57 Aligned_cols=74 Identities=23% Similarity=0.265 Sum_probs=47.4
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCcccc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSFH 142 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SFy 142 (367)
..+|+|+|||+|.++..+.+.. ..+|+--|+..+--. ..+. +.-++ -+++.
T Consensus 52 ~~~VLDlGcGtG~~~~~l~~~~---------------------~~~v~gvD~S~~Ml~-~a~~----~~~~~---~~d~~ 102 (226)
T PRK05785 52 PKKVLDVAAGKGELSYHFKKVF---------------------KYYVVALDYAENMLK-MNLV----ADDKV---VGSFE 102 (226)
T ss_pred CCeEEEEcCCCCHHHHHHHHhc---------------------CCEEEEECCCHHHHH-HHHh----ccceE---Eechh
Confidence 5799999999999987765221 014667776542211 1111 11122 23455
Q ss_pred ccCCCCCceeEEEeccccccccC
Q 017702 143 SRLFPRSSIHFVHTSYALHWLSK 165 (367)
Q Consensus 143 ~~l~P~~svd~~~S~~alhWLs~ 165 (367)
..-+|++|+|+++|++++||+.+
T Consensus 103 ~lp~~d~sfD~v~~~~~l~~~~d 125 (226)
T PRK05785 103 ALPFRDKSFDVVMSSFALHASDN 125 (226)
T ss_pred hCCCCCCCEEEEEecChhhccCC
Confidence 55678999999999999999654
|
|
| >PRK06922 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.26 E-value=2.1e-06 Score=90.33 Aligned_cols=116 Identities=23% Similarity=0.198 Sum_probs=71.7
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc--cccceeeccCcc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH--ARKYFAAGLPGS 140 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~--~~~~f~~gvp~S 140 (367)
..+|+|+|||+|..+..+.+.. | ..+++--|+..+--...=+.++. .+-.+..|....
T Consensus 419 g~rVLDIGCGTG~ls~~LA~~~-----------------P---~~kVtGIDIS~~MLe~Ararl~~~g~~ie~I~gDa~d 478 (677)
T PRK06922 419 GDTIVDVGAGGGVMLDMIEEET-----------------E---DKRIYGIDISENVIDTLKKKKQNEGRSWNVIKGDAIN 478 (677)
T ss_pred CCEEEEeCCCCCHHHHHHHHhC-----------------C---CCEEEEEECCHHHHHHHHHHhhhcCCCeEEEEcchHh
Confidence 5799999999998876654221 2 34678888875322222111111 111233333222
Q ss_pred ccccCCCCCceeEEEeccccccc-cCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 141 FHSRLFPRSSIHFVHTSYALHWL-SKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 141 Fy~~l~P~~svd~~~S~~alhWL-s~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
....+|++++|++++++++||+ +.+|..-. .|+ .+|...+|+.-.+-|||||
T Consensus 479 -Lp~~fedeSFDvVVsn~vLH~L~syIp~~g~-----~f~---------------------~edl~kiLreI~RVLKPGG 531 (677)
T PRK06922 479 -LSSSFEKESVDTIVYSSILHELFSYIEYEGK-----KFN---------------------HEVIKKGLQSAYEVLKPGG 531 (677)
T ss_pred -CccccCCCCEEEEEEchHHHhhhhhcccccc-----ccc---------------------HHHHHHHHHHHHHHcCCCc
Confidence 1223688999999999999974 44552110 111 1477789999999999999
Q ss_pred eEEEEe
Q 017702 220 LMVLIL 225 (367)
Q Consensus 220 ~lvl~~ 225 (367)
++++.-
T Consensus 532 rLII~D 537 (677)
T PRK06922 532 RIIIRD 537 (677)
T ss_pred EEEEEe
Confidence 999964
|
|
| >KOG1270 consensus Methyltransferases [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.24 E-value=7.8e-06 Score=76.89 Aligned_cols=75 Identities=24% Similarity=0.355 Sum_probs=47.8
Q ss_pred hHHHHHHHHHHhhccCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHH
Q 017702 203 DMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEA 282 (367)
Q Consensus 203 D~~~fL~~Ra~EL~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~ 282 (367)
|...||++..+-|+|||+|+++... |.-- + ..+.+ .+.+.+...|-.|.-..+ -|.+++|+..
T Consensus 173 dp~~~l~~l~~~lkP~G~lfittin-rt~l---S--~~~~i--~~~E~vl~ivp~Gth~~e---------kfi~p~e~~~ 235 (282)
T KOG1270|consen 173 DPQEFLNCLSALLKPNGRLFITTIN-RTIL---S--FAGTI--FLAEIVLRIVPKGTHTWE---------KFINPEELTS 235 (282)
T ss_pred CHHHHHHHHHHHhCCCCceEeeehh-hhHH---H--hhccc--cHHHHHHHhcCCCCcCHH---------HcCCHHHHHH
Confidence 6668999999999999999999986 4311 0 00000 112222224555543322 2688999999
Q ss_pred HHHhCCceEEeEE
Q 017702 283 IIRTNGNFTIEKM 295 (367)
Q Consensus 283 ~l~~~g~F~I~~l 295 (367)
+++.++ +.+..+
T Consensus 236 ~l~~~~-~~v~~v 247 (282)
T KOG1270|consen 236 ILNANG-AQVNDV 247 (282)
T ss_pred HHHhcC-cchhhh
Confidence 999885 766544
|
|
| >KOG3010 consensus Methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.19 E-value=5.7e-05 Score=70.35 Aligned_cols=99 Identities=18% Similarity=0.288 Sum_probs=63.0
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCcccc-
Q 017702 64 FKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSFH- 142 (367)
Q Consensus 64 ~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SFy- 142 (367)
-.+.|+|||+|..++.+... + + +|+-.|+.+ +..+.+.+..+.-..-+|-++-
T Consensus 35 ~~a~DvG~G~Gqa~~~iae~------------------~---k-~VIatD~s~----~mL~~a~k~~~~~y~~t~~~ms~ 88 (261)
T KOG3010|consen 35 RLAWDVGTGNGQAARGIAEH------------------Y---K-EVIATDVSE----AMLKVAKKHPPVTYCHTPSTMSS 88 (261)
T ss_pred ceEEEeccCCCcchHHHHHh------------------h---h-hheeecCCH----HHHHHhhcCCCcccccCCccccc
Confidence 48999999999666655422 2 3 466677764 2333322221222222333333
Q ss_pred ---ccCC-CCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccC
Q 017702 143 ---SRLF-PRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPG 218 (367)
Q Consensus 143 ---~~l~-P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 218 (367)
..|. +++|||+|.+.-|+||+ |+.+|.+.-.+-|++.
T Consensus 89 ~~~v~L~g~e~SVDlI~~Aqa~HWF---------------------------------------dle~fy~~~~rvLRk~ 129 (261)
T KOG3010|consen 89 DEMVDLLGGEESVDLITAAQAVHWF---------------------------------------DLERFYKEAYRVLRKD 129 (261)
T ss_pred cccccccCCCcceeeehhhhhHHhh---------------------------------------chHHHHHHHHHHcCCC
Confidence 2233 68999999999999993 5677999999999997
Q ss_pred ceEEEEeec
Q 017702 219 GLMVLILAA 227 (367)
Q Consensus 219 G~lvl~~~g 227 (367)
|.+++...-
T Consensus 130 Gg~iavW~Y 138 (261)
T KOG3010|consen 130 GGLIAVWNY 138 (261)
T ss_pred CCEEEEEEc
Confidence 766666554
|
|
| >PRK05134 bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase; Provisional | Back alignment and domain information |
|---|
Probab=98.18 E-value=2.9e-05 Score=72.00 Aligned_cols=157 Identities=17% Similarity=0.144 Sum_probs=84.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC--ccccceeeccCc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP--HARKYFAAGLPG 139 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~--~~~~~f~~gvp~ 139 (367)
+..+|+|+|||+|..+..+.+. ..+++..|+..+.....-+... ....-+..+...
T Consensus 48 ~~~~vLdiG~G~G~~~~~l~~~----------------------~~~v~~iD~s~~~~~~a~~~~~~~~~~~~~~~~~~~ 105 (233)
T PRK05134 48 FGKRVLDVGCGGGILSESMARL----------------------GADVTGIDASEENIEVARLHALESGLKIDYRQTTAE 105 (233)
T ss_pred CCCeEEEeCCCCCHHHHHHHHc----------------------CCeEEEEcCCHHHHHHHHHHHHHcCCceEEEecCHH
Confidence 3578999999999877655411 1135666665332211111110 001112222211
Q ss_pred cccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 140 SFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
.+- ..+.+.+|+++++..+++..+ ...+|+...+-|+|||
T Consensus 106 ~~~--~~~~~~fD~Ii~~~~l~~~~~--------------------------------------~~~~l~~~~~~L~~gG 145 (233)
T PRK05134 106 ELA--AEHPGQFDVVTCMEMLEHVPD--------------------------------------PASFVRACAKLVKPGG 145 (233)
T ss_pred Hhh--hhcCCCccEEEEhhHhhccCC--------------------------------------HHHHHHHHHHHcCCCc
Confidence 111 125578999999988887432 2347888888999999
Q ss_pred eEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEE
Q 017702 220 LMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKL 298 (367)
Q Consensus 220 ~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~ 298 (367)
+|++...+ +... ...+.... .+....+.- . .......+.+.+++.+++++.| |++......
T Consensus 146 ~l~v~~~~-~~~~--------~~~~~~~~---~~~~~~~~~-~----~~~~~~~~~~~~~~~~~l~~~G-f~~v~~~~~ 206 (233)
T PRK05134 146 LVFFSTLN-RNLK--------SYLLAIVG---AEYVLRMLP-K----GTHDYKKFIKPSELAAWLRQAG-LEVQDITGL 206 (233)
T ss_pred EEEEEecC-CChH--------HHHHHHhh---HHHHhhhcC-c----ccCchhhcCCHHHHHHHHHHCC-CeEeeeeeE
Confidence 99988765 3210 00111110 011111110 0 0011123678999999999997 998877543
|
|
| >PF00891 Methyltransf_2: O-methyltransferase; InterPro: IPR001077 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=98.17 E-value=4.3e-05 Score=71.43 Aligned_cols=104 Identities=21% Similarity=0.287 Sum_probs=70.7
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCcc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGS 140 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~S 140 (367)
++..+|+|+|+|+|..+..++.. .| .++++.-|||.. ...... .--+.-+||+
T Consensus 99 ~~~~~vvDvGGG~G~~~~~l~~~-----------------~P---~l~~~v~Dlp~v-----~~~~~~--~~rv~~~~gd 151 (241)
T PF00891_consen 99 SGFKTVVDVGGGSGHFAIALARA-----------------YP---NLRATVFDLPEV-----IEQAKE--ADRVEFVPGD 151 (241)
T ss_dssp TTSSEEEEET-TTSHHHHHHHHH-----------------ST---TSEEEEEE-HHH-----HCCHHH--TTTEEEEES-
T ss_pred cCccEEEeccCcchHHHHHHHHH-----------------CC---CCcceeeccHhh-----hhcccc--cccccccccc
Confidence 45578999999999998877622 35 678899999941 111111 1123337788
Q ss_pred ccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccC--
Q 017702 141 FHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPG-- 218 (367)
Q Consensus 141 Fy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG-- 218 (367)
|+ .-+|. .|+++-...||=.+ .+|-..+|+.-++.|+||
T Consensus 152 ~f-~~~P~--~D~~~l~~vLh~~~------------------------------------d~~~~~iL~~~~~al~pg~~ 192 (241)
T PF00891_consen 152 FF-DPLPV--ADVYLLRHVLHDWS------------------------------------DEDCVKILRNAAAALKPGKD 192 (241)
T ss_dssp TT-TCCSS--ESEEEEESSGGGS-------------------------------------HHHHHHHHHHHHHHSEECTT
T ss_pred HH-hhhcc--ccceeeehhhhhcc------------------------------------hHHHHHHHHHHHHHhCCCCC
Confidence 99 67776 99999999998322 135557999999999999
Q ss_pred ceEEEEeecccCC
Q 017702 219 GLMVLILAAVVPD 231 (367)
Q Consensus 219 G~lvl~~~g~~~n 231 (367)
|++++.=.- .++
T Consensus 193 g~llI~e~~-~~~ 204 (241)
T PF00891_consen 193 GRLLIIEMV-LPD 204 (241)
T ss_dssp EEEEEEEEE-ECS
T ss_pred CeEEEEeec-cCC
Confidence 998887665 443
|
The reaction is catalysed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. Three classes of DNA Mtases transfer the methyl group from AdoMet to the target base to form either N-6-methyladenine, or N-4-methylcytosine, or C-5- methylcytosine. In C-5-cytosine Mtases, ten conserved motifs are arranged in the same order []. Motif I (a glycine-rich or closely related consensus sequence; FAGxGG in M.HhaI []), shared by other AdoMet-Mtases [], is part of the cofactor binding site and motif IV (PCQ) is part of the catalytic site. In contrast, sequence comparison among N-6-adenine and N-4-cytosine Mtases indicated two of the conserved segments [], although more conserved segments may be present. One of them corresponds to motif I in C-5-cytosine Mtases, and the other is named (D/N/S)PP(Y/F). Crystal structures are known for a number of Mtases [, , , ]. The cofactor binding sites are almost identical and the essential catalytic amino acids coincide. The comparable protein folding and the existence of equivalent amino acids in similar secondary and tertiary positions indicate that many (if not all) AdoMet-Mtases have a common catalytic domain structure. This permits tertiary structure prediction of other DNA, RNA, protein, and small-molecule AdoMet-Mtases from their amino acid sequences []. This domain includes a range of O-methyltransferases some of which utilise S-adenosyl methionine as substrate []. In prokaryotes, the major role of DNA methylation is to protect host DNA against degradation by restriction enzymes. In eukaryotes, DNA methylation has been implicated in the control of several cellular processes, including differentiation, gene regulation, and embryonic development. O-methyltransferases have a common catalytic domain structure, which might be universal among S-adenosyl-L-methionine (AdoMet)-dependent methyltransferases []. Comparative analysis of the predicted amino acid sequences of a number of plant O-methyltransferase cDNA clones show that they share some 32-71% sequence identity, and can be grouped according to the different compounds they utilise as substrates [].; GO: 0008171 O-methyltransferase activity; PDB: 1FPQ_A 1FP1_D 3P9K_B 3P9I_D 3P9C_A 3I53_A 3I5U_A 3I64_A 3I58_A 1ZG3_A .... |
| >PF05401 NodS: Nodulation protein S (NodS); InterPro: IPR008715 This entry consists of nodulation S (NodS) proteins | Back alignment and domain information |
|---|
Probab=98.15 E-value=1.3e-05 Score=72.69 Aligned_cols=95 Identities=20% Similarity=0.347 Sum_probs=67.9
Q ss_pred CCCceEEeeecCCCCcccHHHHH------------HHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC
Q 017702 60 TLKPFKIADLGCSVGPNTLLAVQ------------NIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP 127 (367)
Q Consensus 60 ~~~~~~IaD~GCs~G~nT~~~~~------------~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~ 127 (367)
.+..-+++|+|||.|.+|..+.. ..|+.-++++.. .| .+++..-|+|.
T Consensus 41 ~~ry~~alEvGCs~G~lT~~LA~rCd~LlavDis~~Al~~Ar~Rl~~------~~---~V~~~~~dvp~----------- 100 (201)
T PF05401_consen 41 RRRYRRALEVGCSIGVLTERLAPRCDRLLAVDISPRALARARERLAG------LP---HVEWIQADVPE----------- 100 (201)
T ss_dssp TSSEEEEEEE--TTSHHHHHHGGGEEEEEEEES-HHHHHHHHHHTTT-------S---SEEEEES-TTT-----------
T ss_pred ccccceeEecCCCccHHHHHHHHhhCceEEEeCCHHHHHHHHHhcCC------CC---CeEEEECcCCC-----------
Confidence 45678999999999999999875 444444555442 34 56777777763
Q ss_pred ccccceeeccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHH
Q 017702 128 HARKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESF 207 (367)
Q Consensus 128 ~~~~~f~~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~f 207 (367)
..|++++|+|+.+-.+++|+.. .|+..+
T Consensus 101 -----------------~~P~~~FDLIV~SEVlYYL~~~-----------------------------------~~L~~~ 128 (201)
T PF05401_consen 101 -----------------FWPEGRFDLIVLSEVLYYLDDA-----------------------------------EDLRAA 128 (201)
T ss_dssp --------------------SS-EEEEEEES-GGGSSSH-----------------------------------HHHHHH
T ss_pred -----------------CCCCCCeeEEEEehHhHcCCCH-----------------------------------HHHHHH
Confidence 2478999999999999998742 278889
Q ss_pred HHHHHHhhccCceEEEEee
Q 017702 208 LNARAEELVPGGLMVLILA 226 (367)
Q Consensus 208 L~~Ra~EL~pGG~lvl~~~ 226 (367)
+..-.+-|+|||.||+...
T Consensus 129 l~~l~~~L~pgG~LV~g~~ 147 (201)
T PF05401_consen 129 LDRLVAALAPGGHLVFGHA 147 (201)
T ss_dssp HHHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHHhCCCCEEEEEEe
Confidence 9999999999999999775
|
The products of the rhizobial nodulation genes are involved in the biosynthesis of lipochitin oligosaccharides (LCOs), which are host-specific signal molecules required for nodule formation. NodS is an S-adenosyl-L-methionine (SAM)-dependent methyltransferase involved in N methylation of LCOs. NodS uses N-deacetylated chitooligosaccharides, the products of the NodBC proteins, as its methyl acceptors [].; GO: 0008757 S-adenosylmethionine-dependent methyltransferase activity, 0009312 oligosaccharide biosynthetic process, 0009877 nodulation; PDB: 3OFK_D 3OFJ_A. |
| >TIGR00138 gidB 16S rRNA methyltransferase GidB | Back alignment and domain information |
|---|
Probab=98.13 E-value=1.1e-05 Score=72.68 Aligned_cols=128 Identities=14% Similarity=0.158 Sum_probs=72.3
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchH---HHhhcCCccccceeeccCc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFN---TLFKSLPHARKYFAAGLPG 139 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn---~lf~~l~~~~~~f~~gvp~ 139 (367)
..+|+|+|||+|..|+.+.. . .| ..+|+.-|...+--. ...+.....+--+..+.
T Consensus 43 ~~~vLDiGcGtG~~s~~la~-~----------------~~---~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~~d-- 100 (181)
T TIGR00138 43 GKKVIDIGSGAGFPGIPLAI-A----------------RP---ELKLTLLESNHKKVAFLREVKAELGLNNVEIVNGR-- 100 (181)
T ss_pred CCeEEEecCCCCccHHHHHH-H----------------CC---CCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEecc--
Confidence 47999999999999998752 1 12 235777777643211 11111111122234443
Q ss_pred cccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 140 SFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
. +.+.+.+++|+++|.. +|+ +..+++.-.+-|+|||
T Consensus 101 -~-~~~~~~~~fD~I~s~~-~~~-----------------------------------------~~~~~~~~~~~LkpgG 136 (181)
T TIGR00138 101 -A-EDFQHEEQFDVITSRA-LAS-----------------------------------------LNVLLELTLNLLKVGG 136 (181)
T ss_pred -h-hhccccCCccEEEehh-hhC-----------------------------------------HHHHHHHHHHhcCCCC
Confidence 2 2234568999999864 332 1235555567799999
Q ss_pred eEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCC
Q 017702 220 LMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLP 271 (367)
Q Consensus 220 ~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P 271 (367)
++++.... .. ...+....+.+..+|+- .-+.+++..|
T Consensus 137 ~lvi~~~~--~~------------~~~~~~~~e~~~~~~~~-~~~~~~~~~~ 173 (181)
T TIGR00138 137 YFLAYKGK--KY------------LDEIEEAKRKCQVLGVE-PLEVPPLTGP 173 (181)
T ss_pred EEEEEcCC--Cc------------HHHHHHHHHhhhhcCce-EeeccccCCC
Confidence 99987532 11 13344444566666743 4455666666
|
GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA. |
| >TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family | Back alignment and domain information |
|---|
Probab=98.12 E-value=8.1e-05 Score=68.83 Aligned_cols=62 Identities=21% Similarity=0.294 Sum_probs=45.5
Q ss_pred hHHHHHHHHHHhhccCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHH
Q 017702 203 DMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEA 282 (367)
Q Consensus 203 D~~~fL~~Ra~EL~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~ 282 (367)
+...+++.-.+-|+|||++++.++. .+... ..-|.|.-+++|+++
T Consensus 130 ~R~~~~~~l~~lLkpgG~~ll~~~~-~~~~~----------------------------------~~gpp~~~~~~eL~~ 174 (213)
T TIGR03840 130 MRQRYAAHLLALLPPGARQLLITLD-YDQSE----------------------------------MAGPPFSVSPAEVEA 174 (213)
T ss_pred HHHHHHHHHHHHcCCCCeEEEEEEE-cCCCC----------------------------------CCCcCCCCCHHHHHH
Confidence 4456788889999999998888776 43210 012557789999999
Q ss_pred HHHhCCceEEeEEEEEecC
Q 017702 283 IIRTNGNFTIEKMEKLSQP 301 (367)
Q Consensus 283 ~l~~~g~F~I~~lE~~~~p 301 (367)
.+.. .|+|+.++....+
T Consensus 175 ~f~~--~~~i~~~~~~~~~ 191 (213)
T TIGR03840 175 LYGG--HYEIELLESRDVL 191 (213)
T ss_pred HhcC--CceEEEEeecccc
Confidence 9864 3999998877655
|
Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity. |
| >PF08003 Methyltransf_9: Protein of unknown function (DUF1698); InterPro: IPR010017 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=98.10 E-value=2.1e-05 Score=75.77 Aligned_cols=148 Identities=18% Similarity=0.205 Sum_probs=96.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC----ccccceeecc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP----HARKYFAAGL 137 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~----~~~~~f~~gv 137 (367)
+--+|+|+||+.|.-+..+.. . .| . .|+--| |+-.|..-|..+. ....+|...+
T Consensus 115 ~gk~VLDIGC~nGY~~frM~~------------~-----GA---~-~ViGiD-P~~lf~~QF~~i~~~lg~~~~~~~lpl 172 (315)
T PF08003_consen 115 KGKRVLDIGCNNGYYSFRMLG------------R-----GA---K-SVIGID-PSPLFYLQFEAIKHFLGQDPPVFELPL 172 (315)
T ss_pred CCCEEEEecCCCcHHHHHHhh------------c-----CC---C-EEEEEC-CChHHHHHHHHHHHHhCCCccEEEcCc
Confidence 347999999999999987761 1 12 2 344444 4444555554432 2333343322
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
..+.|-..+++|++||.-.|=-+.+ | -..|..-.+-|+|
T Consensus 173 ---gvE~Lp~~~~FDtVF~MGVLYHrr~-P-------------------------------------l~~L~~Lk~~L~~ 211 (315)
T PF08003_consen 173 ---GVEDLPNLGAFDTVFSMGVLYHRRS-P-------------------------------------LDHLKQLKDSLRP 211 (315)
T ss_pred ---chhhccccCCcCEEEEeeehhccCC-H-------------------------------------HHHHHHHHHhhCC
Confidence 2345555789999999665544332 1 1357777789999
Q ss_pred CceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEE
Q 017702 218 GGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKME 296 (367)
Q Consensus 218 GG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE 296 (367)
||.||+.+....++.. .-+++++.+..|..=|+.||..-+..+++..| |+-.++-
T Consensus 212 gGeLvLETlvi~g~~~-----------------------~~L~P~~rYa~m~nv~FiPs~~~L~~wl~r~g-F~~v~~v 266 (315)
T PF08003_consen 212 GGELVLETLVIDGDEN-----------------------TVLVPEDRYAKMRNVWFIPSVAALKNWLERAG-FKDVRCV 266 (315)
T ss_pred CCEEEEEEeeecCCCc-----------------------eEEccCCcccCCCceEEeCCHHHHHHHHHHcC-CceEEEe
Confidence 9999999997333321 22455566778888888999999999999997 8655443
|
The reaction is catalysed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. Three classes of DNA Mtases transfer the methyl group from AdoMet to the target base to form either N-6-methyladenine, or N-4-methylcytosine, or C-5- methylcytosine. In C-5-cytosine Mtases, ten conserved motifs are arranged in the same order []. Motif I (a glycine-rich or closely related consensus sequence; FAGxGG in M.HhaI []), shared by other AdoMet-Mtases [], is part of the cofactor binding site and motif IV (PCQ) is part of the catalytic site. In contrast, sequence comparison among N-6-adenine and N-4-cytosine Mtases indicated two of the conserved segments [], although more conserved segments may be present. One of them corresponds to motif I in C-5-cytosine Mtases, and the other is named (D/N/S)PP(Y/F). Crystal structures are known for a number of Mtases [, , , ]. The cofactor binding sites are almost identical and the essential catalytic amino acids coincide. The comparable protein folding and the existence of equivalent amino acids in similar secondary and tertiary positions indicate that many (if not all) AdoMet-Mtases have a common catalytic domain structure. This permits tertiary structure prediction of other DNA, RNA, protein, and small-molecule AdoMet-Mtases from their amino acid sequences []. This entry represents a set of bacterial AdoMet-dependent tRNA (mo5U34)-methyltransferases. These enzymes catalyse the conversion of 5-hydroxyuridine (ho5U) to 5-methoxyuridine (mo5U) at the wobble position (34) of tRNA []. The 5-methoxyuridine is subsequently converted to uridine-5-oxyacetic acid, a modified nucleoside that is apparently necessary for the efficient decoding of G-ending Pro, Ala, and Val codons in these organisms [].; GO: 0016300 tRNA (uracil) methyltransferase activity, 0002098 tRNA wobble uridine modification |
| >PRK07580 Mg-protoporphyrin IX methyl transferase; Validated | Back alignment and domain information |
|---|
Probab=98.09 E-value=0.00013 Score=67.11 Aligned_cols=30 Identities=20% Similarity=0.421 Sum_probs=24.5
Q ss_pred CCcccCCHHHHHHHHHhCCceEEeEEEEEec
Q 017702 270 LPTYNATPKELEAIIRTNGNFTIEKMEKLSQ 300 (367)
Q Consensus 270 ~P~y~~s~eE~~~~l~~~g~F~I~~lE~~~~ 300 (367)
.+.++.+.+++.++++..| |++.+.+.+..
T Consensus 188 ~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~~ 217 (230)
T PRK07580 188 TRIYPHREKGIRRALAAAG-FKVVRTERISS 217 (230)
T ss_pred CCccccCHHHHHHHHHHCC-CceEeeeeccc
Confidence 4567789999999999997 99988876643
|
|
| >KOG2361 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.08 E-value=2e-05 Score=73.25 Aligned_cols=195 Identities=17% Similarity=0.215 Sum_probs=111.2
Q ss_pred HHHhhHHHHHHHHH--------HHHHHHHHHHhhhcccccCCCCCCCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhc
Q 017702 24 YANNSTYQRGVVDA--------AKELISEAIADKLDLKILGFDDTLKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRT 95 (367)
Q Consensus 24 Y~~nS~~Q~~~~~~--------~~~ll~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~ 95 (367)
|..++..+-..... -..|+.....+..+.+ .....+|+++|||-|..+..+++..
T Consensus 31 y~~~~~k~wD~fy~~~~~rFfkdR~wL~~Efpel~~~~------~~~~~~ilEvGCGvGNtvfPll~~~----------- 93 (264)
T KOG2361|consen 31 YEREASKYWDTFYKIHENRFFKDRNWLLREFPELLPVD------EKSAETILEVGCGVGNTVFPLLKTS----------- 93 (264)
T ss_pred hhcchhhhhhhhhhhccccccchhHHHHHhhHHhhCcc------ccChhhheeeccCCCcccchhhhcC-----------
Confidence 55555554444332 2455655555533322 2223499999999998888776222
Q ss_pred cCCCCCCCcceeEEEEcCCCccchHHHhhcCCc--ccc--ceeeccCccccccCCCCCceeEEEeccccccccCCCcccc
Q 017702 96 TNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH--ARK--YFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIV 171 (367)
Q Consensus 96 ~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~--~~~--~f~~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~ 171 (367)
..| .+.+|..|-..+--+- .+.-.. ... .|+.-.-++=...-++++|+|++..-++ ||-+|+.
T Consensus 94 ----~n~---~l~v~acDfsp~Ai~~-vk~~~~~~e~~~~afv~Dlt~~~~~~~~~~~svD~it~IFv---LSAi~pe-- 160 (264)
T KOG2361|consen 94 ----PNN---RLKVYACDFSPRAIEL-VKKSSGYDESRVEAFVWDLTSPSLKEPPEEGSVDIITLIFV---LSAIHPE-- 160 (264)
T ss_pred ----CCC---CeEEEEcCCChHHHHH-HHhccccchhhhcccceeccchhccCCCCcCccceEEEEEE---EeccChH--
Confidence 134 4788987776543222 222111 111 1332222222455567789998877554 3555542
Q ss_pred CCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEEEEeecccCCCCCCCCCchhhHHHHHHHHH
Q 017702 172 DPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCF 251 (367)
Q Consensus 172 ~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al 251 (367)
-|.+-+....+-|||||.|++-=.| +.+.. . +
T Consensus 161 -------------------------------k~~~a~~nl~~llKPGG~llfrDYg-~~Dla------------q----l 192 (264)
T KOG2361|consen 161 -------------------------------KMQSVIKNLRTLLKPGGSLLFRDYG-RYDLA------------Q----L 192 (264)
T ss_pred -------------------------------HHHHHHHHHHHHhCCCcEEEEeecc-cchHH------------H----H
Confidence 2334566777788999999999888 65521 0 1
Q ss_pred HHHHHcCCCCHhhh-hccCCCcccCCHHHHHHHHHhCCceEEeEEEEE
Q 017702 252 NDLAKMGVLSEEKV-DSFNLPTYNATPKELEAIIRTNGNFTIEKMEKL 298 (367)
Q Consensus 252 ~~m~~eG~i~~~~~-d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~ 298 (367)
+-+ ..-.|+.... ..=..+.||.+.+|+++++.++| |..++++.-
T Consensus 193 RF~-~~~~i~~nfYVRgDGT~~YfF~~eeL~~~f~~ag-f~~~~~~~~ 238 (264)
T KOG2361|consen 193 RFK-KGQCISENFYVRGDGTRAYFFTEEELDELFTKAG-FEEVQLEVD 238 (264)
T ss_pred hcc-CCceeecceEEccCCceeeeccHHHHHHHHHhcc-cchhcccce
Confidence 111 1222322111 12246889999999999999997 887776653
|
|
| >TIGR03438 probable methyltransferase | Back alignment and domain information |
|---|
Probab=98.08 E-value=1.5e-05 Score=77.46 Aligned_cols=110 Identities=16% Similarity=0.217 Sum_probs=69.1
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc-cccceeeccCccc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH-ARKYFAAGLPGSF 141 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~-~~~~f~~gvp~SF 141 (367)
..+|+|+|||+|..|..+++... . ..+++--|+...--....+.+.. .+..=+.++-|+|
T Consensus 64 ~~~iLELGcGtG~~t~~Ll~~l~---------------~----~~~~~~iDiS~~mL~~a~~~l~~~~p~~~v~~i~gD~ 124 (301)
T TIGR03438 64 GCELVELGSGSSRKTRLLLDALR---------------Q----PARYVPIDISADALKESAAALAADYPQLEVHGICADF 124 (301)
T ss_pred CCeEEecCCCcchhHHHHHHhhc---------------c----CCeEEEEECCHHHHHHHHHHHHhhCCCceEEEEEEcc
Confidence 46899999999999998886541 0 13577777764322222222221 1111123344455
Q ss_pred cccC-CCCC----ceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhc
Q 017702 142 HSRL-FPRS----SIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELV 216 (367)
Q Consensus 142 y~~l-~P~~----svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~ 216 (367)
.+.+ +|.. ...++++.+++++++ | .|...||+.-++-|+
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~gs~~~~~~--~----------------------------------~e~~~~L~~i~~~L~ 168 (301)
T TIGR03438 125 TQPLALPPEPAAGRRLGFFPGSTIGNFT--P----------------------------------EEAVAFLRRIRQLLG 168 (301)
T ss_pred cchhhhhcccccCCeEEEEecccccCCC--H----------------------------------HHHHHHHHHHHHhcC
Confidence 5432 2322 456777778899875 2 255679999999999
Q ss_pred cCceEEEEeec
Q 017702 217 PGGLMVLILAA 227 (367)
Q Consensus 217 pGG~lvl~~~g 227 (367)
|||+|++.+-.
T Consensus 169 pgG~~lig~d~ 179 (301)
T TIGR03438 169 PGGGLLIGVDL 179 (301)
T ss_pred CCCEEEEeccC
Confidence 99999987765
|
This model represents a distinct set of uncharacterized proteins found in the bacteria. Analysis by PSI-BLAST shows remote sequence homology to methyltransferases |
| >smart00138 MeTrc Methyltransferase, chemotaxis proteins | Back alignment and domain information |
|---|
Probab=98.07 E-value=2.4e-05 Score=74.63 Aligned_cols=43 Identities=28% Similarity=0.474 Sum_probs=34.9
Q ss_pred CCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEEEE
Q 017702 146 FPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLI 224 (367)
Q Consensus 146 ~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~ 224 (367)
+|.+++|+|+|.++|||++. | +...+|+.-++-|+|||+|++.
T Consensus 199 ~~~~~fD~I~crnvl~yf~~-~-----------------------------------~~~~~l~~l~~~L~pGG~L~lg 241 (264)
T smart00138 199 PPLGDFDLIFCRNVLIYFDE-P-----------------------------------TQRKLLNRFAEALKPGGYLFLG 241 (264)
T ss_pred CccCCCCEEEechhHHhCCH-H-----------------------------------HHHHHHHHHHHHhCCCeEEEEE
Confidence 45789999999999999753 1 3446888888999999998864
|
Methylates methyl-accepting chemotaxis proteins to form gamma-glutamyl methyl ester residues. |
| >PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional | Back alignment and domain information |
|---|
Probab=98.07 E-value=3.1e-05 Score=71.28 Aligned_cols=108 Identities=24% Similarity=0.306 Sum_probs=65.8
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCcccc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSFH 142 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SFy 142 (367)
..+|+|+|||+|..|..+++.. .+ .-+|+--|+-. .+ .++ .-.+..| ++.
T Consensus 52 ~~~VLDlG~GtG~~t~~l~~~~----------------~~---~~~V~aVDi~~--~~----~~~--~v~~i~~---D~~ 101 (209)
T PRK11188 52 GMTVVDLGAAPGGWSQYAVTQI----------------GD---KGRVIACDILP--MD----PIV--GVDFLQG---DFR 101 (209)
T ss_pred CCEEEEEcccCCHHHHHHHHHc----------------CC---CceEEEEeccc--cc----CCC--CcEEEec---CCC
Confidence 4689999999999888776432 11 12466666632 11 111 1223333 333
Q ss_pred cc--------CCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHh
Q 017702 143 SR--------LFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEE 214 (367)
Q Consensus 143 ~~--------l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~E 214 (367)
.. -++++++|+++|+.+.||... |. .| ... + .......|+.-.+-
T Consensus 102 ~~~~~~~i~~~~~~~~~D~V~S~~~~~~~g~-~~--~d-------------------~~~----~-~~~~~~~L~~~~~~ 154 (209)
T PRK11188 102 DELVLKALLERVGDSKVQVVMSDMAPNMSGT-PA--VD-------------------IPR----A-MYLVELALDMCRDV 154 (209)
T ss_pred ChHHHHHHHHHhCCCCCCEEecCCCCccCCC-hH--HH-------------------HHH----H-HHHHHHHHHHHHHH
Confidence 32 256789999999999999431 11 00 000 0 11134688888899
Q ss_pred hccCceEEEEeec
Q 017702 215 LVPGGLMVLILAA 227 (367)
Q Consensus 215 L~pGG~lvl~~~g 227 (367)
|+|||.|++..+.
T Consensus 155 LkpGG~~vi~~~~ 167 (209)
T PRK11188 155 LAPGGSFVVKVFQ 167 (209)
T ss_pred cCCCCEEEEEEec
Confidence 9999999997775
|
|
| >TIGR00537 hemK_rel_arch HemK-related putative methylase | Back alignment and domain information |
|---|
Probab=98.04 E-value=5.1e-05 Score=67.69 Aligned_cols=123 Identities=15% Similarity=0.124 Sum_probs=64.9
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCcccc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSFH 142 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SFy 142 (367)
..+|+|+|||+|..++.+... . . +++-.|+-..--...=+++... ..-+.-+.++++
T Consensus 20 ~~~vLdlG~G~G~~~~~l~~~-----------------~----~-~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~~d~~ 76 (179)
T TIGR00537 20 PDDVLEIGAGTGLVAIRLKGK-----------------G----K-CILTTDINPFAVKELRENAKLN-NVGLDVVMTDLF 76 (179)
T ss_pred CCeEEEeCCChhHHHHHHHhc-----------------C----C-EEEEEECCHHHHHHHHHHHHHc-CCceEEEEcccc
Confidence 368999999999988876521 1 2 4666676432211111111100 000111223344
Q ss_pred ccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEE
Q 017702 143 SRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMV 222 (367)
Q Consensus 143 ~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lv 222 (367)
+. +.+++|+++|+..+|.....+.. .+....++..| . .-...+..||+.-.+-|+|||+++
T Consensus 77 ~~--~~~~fD~Vi~n~p~~~~~~~~~~-~~~~~~~~~~~------~----------~~~~~~~~~l~~~~~~Lk~gG~~~ 137 (179)
T TIGR00537 77 KG--VRGKFDVILFNPPYLPLEDDLRR-GDWLDVAIDGG------K----------DGRKVIDRFLDELPEILKEGGRVQ 137 (179)
T ss_pred cc--cCCcccEEEECCCCCCCcchhcc-cchhhhhhhcC------C----------chHHHHHHHHHhHHHhhCCCCEEE
Confidence 42 24589999999888765432210 00000011000 0 001224568888889999999999
Q ss_pred EEeec
Q 017702 223 LILAA 227 (367)
Q Consensus 223 l~~~g 227 (367)
+...+
T Consensus 138 ~~~~~ 142 (179)
T TIGR00537 138 LIQSS 142 (179)
T ss_pred EEEec
Confidence 88765
|
The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes. |
| >TIGR00091 tRNA (guanine-N(7)-)-methyltransferase | Back alignment and domain information |
|---|
Probab=98.01 E-value=4.3e-05 Score=69.37 Aligned_cols=115 Identities=17% Similarity=0.206 Sum_probs=66.6
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc---cccceeeccCc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH---ARKYFAAGLPG 139 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~---~~~~f~~gvp~ 139 (367)
.-+|+|+|||+|..+..+.... | +.+++--|....-....-+.+.. .+-.|+.+.--
T Consensus 17 ~~~ilDiGcG~G~~~~~la~~~-----------------p---~~~v~gvD~~~~~l~~a~~~~~~~~l~ni~~i~~d~~ 76 (194)
T TIGR00091 17 APLHLEIGCGKGRFLIDMAKQN-----------------P---DKNFLGIEIHTPIVLAANNKANKLGLKNLHVLCGDAN 76 (194)
T ss_pred CceEEEeCCCccHHHHHHHHhC-----------------C---CCCEEEEEeeHHHHHHHHHHHHHhCCCCEEEEccCHH
Confidence 4599999999999998776321 2 23455555533211111111111 11123333322
Q ss_pred cccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 140 SFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
.+...++|++++|.+++++..+|..+.. . |.++ ....||+.-++-|+|||
T Consensus 77 ~~~~~~~~~~~~d~v~~~~pdpw~k~~h-~----------~~r~-------------------~~~~~l~~~~r~LkpgG 126 (194)
T TIGR00091 77 ELLDKFFPDGSLSKVFLNFPDPWPKKRH-N----------KRRI-------------------TQPHFLKEYANVLKKGG 126 (194)
T ss_pred HHHHhhCCCCceeEEEEECCCcCCCCCc-c----------cccc-------------------CCHHHHHHHHHHhCCCC
Confidence 2224456778999999999999944311 0 0000 01358888999999999
Q ss_pred eEEEEeec
Q 017702 220 LMVLILAA 227 (367)
Q Consensus 220 ~lvl~~~g 227 (367)
.+++.+-.
T Consensus 127 ~l~~~td~ 134 (194)
T TIGR00091 127 VIHFKTDN 134 (194)
T ss_pred EEEEEeCC
Confidence 99887744
|
In E. coli, this protein flanks the DNA repair protein MutY, also called micA. |
| >TIGR03587 Pse_Me-ase pseudaminic acid biosynthesis-associated methylase | Back alignment and domain information |
|---|
Probab=97.98 E-value=5.3e-05 Score=69.53 Aligned_cols=103 Identities=19% Similarity=0.228 Sum_probs=59.2
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCC
Q 017702 24 YANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPS 103 (367)
Q Consensus 24 Y~~nS~~Q~~~~~~~~~ll~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~ 103 (367)
|.+....+... .....++.+.+.. .++..+|+|+|||+|.++..+.+.. |
T Consensus 17 ~~~rn~~~~~~-~~~~~~~~~~l~~-----------~~~~~~VLDiGCG~G~~~~~L~~~~-----------------~- 66 (204)
T TIGR03587 17 YIDRNSRQSLV-AAKLAMFARALNR-----------LPKIASILELGANIGMNLAALKRLL-----------------P- 66 (204)
T ss_pred hhhccccHHHH-HHHHHHHHHHHHh-----------cCCCCcEEEEecCCCHHHHHHHHhC-----------------C-
Confidence 55444433332 3344555555543 2345689999999999888775221 1
Q ss_pred cceeEEEEcCCCccchHHHhhcCCccccceeeccCccccccCCCCCceeEEEecccccccc
Q 017702 104 ALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLS 164 (367)
Q Consensus 104 ~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SFy~~l~P~~svd~~~S~~alhWLs 164 (367)
..+++--|+..+-....-+.++. ..+.. ++..+ .+|++++|+++|+.+||+++
T Consensus 67 --~~~v~giDiS~~~l~~A~~~~~~--~~~~~---~d~~~-~~~~~sfD~V~~~~vL~hl~ 119 (204)
T TIGR03587 67 --FKHIYGVEINEYAVEKAKAYLPN--INIIQ---GSLFD-PFKDNFFDLVLTKGVLIHIN 119 (204)
T ss_pred --CCeEEEEECCHHHHHHHHhhCCC--CcEEE---eeccC-CCCCCCEEEEEECChhhhCC
Confidence 23566667754332222111221 11222 33444 67889999999999998764
|
Members of this small clade are methyltransferases of the pfam08241 family and are observed within operons for the biosynthesis of pseudaminic acid, a component of exopolysaccharide and flagellin glycosyl modifications. Notable among these genomes is Pseudomonas fluorescens PfO-1. Possibly one of the two hydroxyl groups of pseudaminic acid, at positions 4 and 8 is converted to a methoxy group by this enzyme |
| >COG4123 Predicted O-methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.97 E-value=7.3e-05 Score=70.44 Aligned_cols=116 Identities=22% Similarity=0.274 Sum_probs=73.4
Q ss_pred CCceEEeeecCCCCcccHHHHHHH--------------HHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNI--------------IEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL 126 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~i--------------i~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l 126 (367)
+..-+|+|+|||.|..++.+.+.. .+..++....+ +. .. .|+|+.-|+ +..
T Consensus 43 ~~~~~IlDlGaG~G~l~L~la~r~~~a~I~~VEiq~~~a~~A~~nv~ln-~l--~~---ri~v~~~Di-----~~~---- 107 (248)
T COG4123 43 PKKGRILDLGAGNGALGLLLAQRTEKAKIVGVEIQEEAAEMAQRNVALN-PL--EE---RIQVIEADI-----KEF---- 107 (248)
T ss_pred ccCCeEEEecCCcCHHHHHHhccCCCCcEEEEEeCHHHHHHHHHHHHhC-cc--hh---ceeEehhhH-----HHh----
Confidence 447999999999999999998752 12222221111 10 11 345555444 222
Q ss_pred CccccceeeccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHH
Q 017702 127 PHARKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMES 206 (367)
Q Consensus 127 ~~~~~~f~~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~ 206 (367)
..-.+.+++|+|+| -|+ .|..| .. ....+..+..+-+..-++..
T Consensus 108 ----------------~~~~~~~~fD~Ii~---------NPP--------yf~~~-~~--~~~~~~~~~Ar~e~~~~le~ 151 (248)
T COG4123 108 ----------------LKALVFASFDLIIC---------NPP--------YFKQG-SR--LNENPLRAIARHEITLDLED 151 (248)
T ss_pred ----------------hhcccccccCEEEe---------CCC--------CCCCc-cc--cCcChhhhhhhhhhcCCHHH
Confidence 22233348999999 454 22222 22 23344566677778889999
Q ss_pred HHHHHHHhhccCceEEEEeec
Q 017702 207 FLNARAEELVPGGLMVLILAA 227 (367)
Q Consensus 207 fL~~Ra~EL~pGG~lvl~~~g 227 (367)
+++.-++-|||||.+.++-..
T Consensus 152 ~i~~a~~~lk~~G~l~~V~r~ 172 (248)
T COG4123 152 LIRAAAKLLKPGGRLAFVHRP 172 (248)
T ss_pred HHHHHHHHccCCCEEEEEecH
Confidence 999999999999999888754
|
|
| >PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated | Back alignment and domain information |
|---|
Probab=97.92 E-value=7.6e-05 Score=67.06 Aligned_cols=20 Identities=20% Similarity=0.419 Sum_probs=17.4
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAV 81 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~ 81 (367)
...+|+|+|||+|..++.+.
T Consensus 31 ~~~~vLDiG~G~G~~~~~la 50 (187)
T PRK08287 31 RAKHLIDVGAGTGSVSIEAA 50 (187)
T ss_pred CCCEEEEECCcCCHHHHHHH
Confidence 34689999999999999886
|
|
| >PRK13255 thiopurine S-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00029 Score=65.40 Aligned_cols=62 Identities=23% Similarity=0.295 Sum_probs=42.9
Q ss_pred hHHHHHHHHHHhhccCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHH
Q 017702 203 DMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEA 282 (367)
Q Consensus 203 D~~~fL~~Ra~EL~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~ 282 (367)
+...+++.-++-|+|||++++.+.. .+... ..-|.|..+.+|+++
T Consensus 133 ~R~~~~~~l~~lL~pgG~~~l~~~~-~~~~~----------------------------------~~gPp~~~~~~el~~ 177 (218)
T PRK13255 133 MRERYVQQLAALLPAGCRGLLVTLD-YPQEE----------------------------------LAGPPFSVSDEEVEA 177 (218)
T ss_pred HHHHHHHHHHHHcCCCCeEEEEEEE-eCCcc----------------------------------CCCCCCCCCHHHHHH
Confidence 3446788888999999986665554 32210 012556889999999
Q ss_pred HHHhCCceEEeEEEEEecC
Q 017702 283 IIRTNGNFTIEKMEKLSQP 301 (367)
Q Consensus 283 ~l~~~g~F~I~~lE~~~~p 301 (367)
++.. .|+|+.++....+
T Consensus 178 ~~~~--~~~i~~~~~~~~~ 194 (218)
T PRK13255 178 LYAG--CFEIELLERQDVL 194 (218)
T ss_pred HhcC--CceEEEeeecccc
Confidence 9853 4999988876554
|
|
| >PF13649 Methyltransf_25: Methyltransferase domain; PDB: 3BXO_B 3GGD_A 3PX2_A 3PX3_A 3PFH_D 3PFG_A 1Y8C_A | Back alignment and domain information |
|---|
Probab=97.90 E-value=2.5e-05 Score=62.91 Aligned_cols=98 Identities=28% Similarity=0.341 Sum_probs=60.0
Q ss_pred EeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC--ccccceeeccCccccc
Q 017702 66 IADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP--HARKYFAAGLPGSFHS 143 (367)
Q Consensus 66 IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~--~~~~~f~~gvp~SFy~ 143 (367)
|+|+|||+|.++..+.... +. .| +.+++.-|+..+-....-+... ..+--|..+....
T Consensus 1 ILDlgcG~G~~~~~l~~~~---------~~-----~~---~~~~~gvD~s~~~l~~~~~~~~~~~~~~~~~~~D~~~--- 60 (101)
T PF13649_consen 1 ILDLGCGTGRVTRALARRF---------DA-----GP---SSRVIGVDISPEMLELAKKRFSEDGPKVRFVQADARD--- 60 (101)
T ss_dssp -EEET-TTSHHHHHHHHHS----------------------SEEEEEES-HHHHHHHHHHSHHTTTTSEEEESCTTC---
T ss_pred CEEeecCCcHHHHHHHHHh---------hh-----cc---cceEEEEECCHHHHHHHHHhchhcCCceEEEECCHhH---
Confidence 7999999999999887442 11 12 3468888887543322222221 1123355555322
Q ss_pred cCCCCCceeEEEeccc-cccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 144 RLFPRSSIHFVHTSYA-LHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 144 ~l~P~~svd~~~S~~a-lhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
--++.+++|+++++.+ +|++++ +++..+|+.-++-|+|||
T Consensus 61 l~~~~~~~D~v~~~~~~~~~~~~------------------------------------~~~~~ll~~~~~~l~pgG 101 (101)
T PF13649_consen 61 LPFSDGKFDLVVCSGLSLHHLSP------------------------------------EELEALLRRIARLLRPGG 101 (101)
T ss_dssp HHHHSSSEEEEEE-TTGGGGSSH------------------------------------HHHHHHHHHHHHTEEEEE
T ss_pred CcccCCCeeEEEEcCCccCCCCH------------------------------------HHHHHHHHHHHHHhCCCC
Confidence 1236779999999666 998662 367789999999999998
|
|
| >PF05175 MTS: Methyltransferase small domain; InterPro: IPR007848 This domain is found in ribosomal RNA small subunit methyltransferase C and in other methyltransferases | Back alignment and domain information |
|---|
Probab=97.87 E-value=5.2e-05 Score=67.37 Aligned_cols=109 Identities=17% Similarity=0.270 Sum_probs=64.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc--cccceeeccCc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH--ARKYFAAGLPG 139 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~--~~~~f~~gvp~ 139 (367)
..-+|+|+|||+|..++.+... .| ...|+..|.-.+-....-+++.. ... +..+..
T Consensus 31 ~~~~vLDlG~G~G~i~~~la~~-----------------~~---~~~v~~vDi~~~a~~~a~~n~~~n~~~~--v~~~~~ 88 (170)
T PF05175_consen 31 KGGRVLDLGCGSGVISLALAKR-----------------GP---DAKVTAVDINPDALELAKRNAERNGLEN--VEVVQS 88 (170)
T ss_dssp TTCEEEEETSTTSHHHHHHHHT-----------------ST---CEEEEEEESBHHHHHHHHHHHHHTTCTT--EEEEES
T ss_pred cCCeEEEecCChHHHHHHHHHh-----------------CC---CCEEEEEcCCHHHHHHHHHHHHhcCccc--cccccc
Confidence 3468999999999999988631 23 44677777764333333222211 111 222333
Q ss_pred cccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 140 SFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
+.++.+. ++++|+|+|+=-+|+-.. .-..-+..|++.-.+-|+|||
T Consensus 89 d~~~~~~-~~~fD~Iv~NPP~~~~~~---------------------------------~~~~~~~~~i~~a~~~Lk~~G 134 (170)
T PF05175_consen 89 DLFEALP-DGKFDLIVSNPPFHAGGD---------------------------------DGLDLLRDFIEQARRYLKPGG 134 (170)
T ss_dssp STTTTCC-TTCEEEEEE---SBTTSH---------------------------------CHHHHHHHHHHHHHHHEEEEE
T ss_pred ccccccc-ccceeEEEEccchhcccc---------------------------------cchhhHHHHHHHHHHhccCCC
Confidence 4555444 789999999543333110 011234568888889999999
Q ss_pred eEEEEee
Q 017702 220 LMVLILA 226 (367)
Q Consensus 220 ~lvl~~~ 226 (367)
.|++...
T Consensus 135 ~l~lv~~ 141 (170)
T PF05175_consen 135 RLFLVIN 141 (170)
T ss_dssp EEEEEEE
T ss_pred EEEEEee
Confidence 9988664
|
; GO: 0008168 methyltransferase activity; PDB: 1WY7_A 1DUS_A 2OZV_A 2PJD_A 1VQ1_A 1NV9_A 1SG9_C 1NV8_A 3Q87_B 3DMF_A .... |
| >PF06080 DUF938: Protein of unknown function (DUF938); InterPro: IPR010342 This family consists of several hypothetical proteins from both prokaryotes and eukaryotes | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00021 Score=65.42 Aligned_cols=149 Identities=18% Similarity=0.228 Sum_probs=95.7
Q ss_pred EEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc-----c-ccc------
Q 017702 65 KIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH-----A-RKY------ 132 (367)
Q Consensus 65 ~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~-----~-~~~------ 132 (367)
+|+|+|||||--...+.+.+ | .+++.=+|...+-+.++-.-+.. - .+.
T Consensus 28 ~vLEiaSGtGqHa~~FA~~l-----------------P---~l~WqPSD~~~~~~~sI~a~~~~~~~~Nv~~P~~lDv~~ 87 (204)
T PF06080_consen 28 RVLEIASGTGQHAVYFAQAL-----------------P---HLTWQPSDPDDNLRPSIRAWIAEAGLPNVRPPLALDVSA 87 (204)
T ss_pred eEEEEcCCccHHHHHHHHHC-----------------C---CCEEcCCCCChHHHhhHHHHHHhcCCcccCCCeEeecCC
Confidence 79999999998888776433 4 56777888887776665443211 0 011
Q ss_pred --eeeccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHH
Q 017702 133 --FAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNA 210 (367)
Q Consensus 133 --f~~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~ 210 (367)
...+.+. .++..++|.++|.+.+|-.+- + .-..+++.
T Consensus 88 ~~w~~~~~~-----~~~~~~~D~i~~~N~lHI~p~-------------------------~-----------~~~~lf~~ 126 (204)
T PF06080_consen 88 PPWPWELPA-----PLSPESFDAIFCINMLHISPW-------------------------S-----------AVEGLFAG 126 (204)
T ss_pred CCCcccccc-----ccCCCCcceeeehhHHHhcCH-------------------------H-----------HHHHHHHH
Confidence 1111111 125689999999999998441 1 22347888
Q ss_pred HHHhhccCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCce
Q 017702 211 RAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNF 290 (367)
Q Consensus 211 Ra~EL~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F 290 (367)
-++-|++||.|++-.+= ..++...++. . ..+...|++ -+.-|-.|+.+++.++-.++| +
T Consensus 127 a~~~L~~gG~L~~YGPF-~~~G~~ts~S-N----~~FD~sLr~--------------rdp~~GiRD~e~v~~lA~~~G-L 185 (204)
T PF06080_consen 127 AARLLKPGGLLFLYGPF-NRDGKFTSES-N----AAFDASLRS--------------RDPEWGIRDIEDVEALAAAHG-L 185 (204)
T ss_pred HHHhCCCCCEEEEeCCc-ccCCEeCCcH-H----HHHHHHHhc--------------CCCCcCccCHHHHHHHHHHCC-C
Confidence 89999999999888774 4455433321 1 333444442 234477899999999988887 7
Q ss_pred EEeEE
Q 017702 291 TIEKM 295 (367)
Q Consensus 291 ~I~~l 295 (367)
+++..
T Consensus 186 ~l~~~ 190 (204)
T PF06080_consen 186 ELEED 190 (204)
T ss_pred ccCcc
Confidence 66544
|
The function of this family is unknown. |
| >KOG1540 consensus Ubiquinone biosynthesis methyltransferase COQ5 [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.87 E-value=8.2e-05 Score=69.84 Aligned_cols=174 Identities=17% Similarity=0.202 Sum_probs=98.0
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC---C--c-ccccee
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL---P--H-ARKYFA 134 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l---~--~-~~~~f~ 134 (367)
.+..+++|.+||||..|+.+++.+-+ +.++ . +=+|+..|.-.+.-+-=-+.- + . ....|+
T Consensus 99 ~~~m~~lDvaGGTGDiaFril~~v~s----~~~~------~----~~~V~v~Dinp~mL~vgkqRa~~~~l~~~~~~~w~ 164 (296)
T KOG1540|consen 99 GKGMKVLDVAGGTGDIAFRILRHVKS----QFGD------R----ESKVTVLDINPHMLAVGKQRAKKRPLKASSRVEWV 164 (296)
T ss_pred CCCCeEEEecCCcchhHHHHHHhhcc----ccCC------C----CceEEEEeCCHHHHHHHHHHHhhcCCCcCCceEEE
Confidence 44699999999999999999865521 1111 1 236777777543322111110 0 0 112344
Q ss_pred eccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHh
Q 017702 135 AGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEE 214 (367)
Q Consensus 135 ~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~E 214 (367)
.|. -..--||++++|...+++.+--..+++ +-|+.-++-
T Consensus 165 ~~d---AE~LpFdd~s~D~yTiafGIRN~th~~--------------------------------------k~l~EAYRV 203 (296)
T KOG1540|consen 165 EGD---AEDLPFDDDSFDAYTIAFGIRNVTHIQ--------------------------------------KALREAYRV 203 (296)
T ss_pred eCC---cccCCCCCCcceeEEEecceecCCCHH--------------------------------------HHHHHHHHh
Confidence 444 344557999999999988887544333 234444477
Q ss_pred hccCceEEEEeecccCCCCCCCCCchhhHHH---HHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceE
Q 017702 215 LVPGGLMVLILAAVVPDGIPLSNSYVGVFNN---ILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFT 291 (367)
Q Consensus 215 L~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~---~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~ 291 (367)
|||||+|.+.-+. .-+..+.........++ .+.+.+....+.+..=-+-+. -||+.||+..++++.| |.
T Consensus 204 LKpGGrf~cLeFs-kv~~~~l~~fy~~ysf~VlpvlG~~iagd~~sYqYLveSI~------rfp~qe~f~~miedaG-F~ 275 (296)
T KOG1540|consen 204 LKPGGRFSCLEFS-KVENEPLKWFYDQYSFDVLPVLGEIIAGDRKSYQYLVESIR------RFPPQEEFASMIEDAG-FS 275 (296)
T ss_pred cCCCcEEEEEEcc-ccccHHHHHHHHhhhhhhhchhhHhhhhhHhhhhhHHhhhh------cCCCHHHHHHHHHHcC-Cc
Confidence 9999999999888 54422111000111112 223333332222221111111 2689999999999997 87
Q ss_pred EeE-EEE
Q 017702 292 IEK-MEK 297 (367)
Q Consensus 292 I~~-lE~ 297 (367)
... +|.
T Consensus 276 ~~~~ye~ 282 (296)
T KOG1540|consen 276 SVNGYEN 282 (296)
T ss_pred ccccccc
Confidence 765 443
|
|
| >PLN02585 magnesium protoporphyrin IX methyltransferase | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00016 Score=70.77 Aligned_cols=29 Identities=14% Similarity=0.375 Sum_probs=23.4
Q ss_pred cccCCHHHHHHHHHhCCceEEeEEEEEecC
Q 017702 272 TYNATPKELEAIIRTNGNFTIEKMEKLSQP 301 (367)
Q Consensus 272 ~y~~s~eE~~~~l~~~g~F~I~~lE~~~~p 301 (367)
.|+.+.+|+++++++.| |+|...+....+
T Consensus 275 ~y~~s~eel~~lL~~AG-f~v~~~~~~~~~ 303 (315)
T PLN02585 275 AYLHAEADVERALKKAG-WKVARREMTATQ 303 (315)
T ss_pred eeeCCHHHHHHHHHHCC-CEEEEEEEeecc
Confidence 46679999999999997 999877765443
|
|
| >PTZ00146 fibrillarin; Provisional | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00024 Score=68.54 Aligned_cols=22 Identities=18% Similarity=0.190 Sum_probs=18.3
Q ss_pred ceEEeeecCCCCcccHHHHHHH
Q 017702 63 PFKIADLGCSVGPNTLLAVQNI 84 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~i 84 (367)
-.+|+|+|||+|..|..+.+.+
T Consensus 133 G~~VLDLGaG~G~~t~~lAdiV 154 (293)
T PTZ00146 133 GSKVLYLGAASGTTVSHVSDLV 154 (293)
T ss_pred CCEEEEeCCcCCHHHHHHHHHh
Confidence 3699999999999998886444
|
|
| >PHA03411 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.0001 Score=70.46 Aligned_cols=119 Identities=10% Similarity=0.080 Sum_probs=68.5
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCcccc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSFH 142 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SFy 142 (367)
..+|+|+|||+|..++.+.... + ..+|+..|+-. ++-.+.+...+ +.-+..+. +.
T Consensus 65 ~grVLDLGcGsGilsl~la~r~-----------------~---~~~V~gVDisp-~al~~Ar~n~~-~v~~v~~D---~~ 119 (279)
T PHA03411 65 TGKVLDLCAGIGRLSFCMLHRC-----------------K---PEKIVCVELNP-EFARIGKRLLP-EAEWITSD---VF 119 (279)
T ss_pred CCeEEEcCCCCCHHHHHHHHhC-----------------C---CCEEEEEECCH-HHHHHHHHhCc-CCEEEECc---hh
Confidence 3689999999998887664211 1 23677778764 22233332211 12233333 33
Q ss_pred ccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHh--hHHHHHHHHHHhhccCce
Q 017702 143 SRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKN--DMESFLNARAEELVPGGL 220 (367)
Q Consensus 143 ~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~--D~~~fL~~Ra~EL~pGG~ 220 (367)
+ +.+..++|+|+|+-.++++..... . ....|+.|.. ..+ .+..||...+.-|+|+|.
T Consensus 120 e-~~~~~kFDlIIsNPPF~~l~~~d~--~--~~~~~~GG~~----------------g~~~l~~~~~l~~v~~~L~p~G~ 178 (279)
T PHA03411 120 E-FESNEKFDVVISNPPFGKINTTDT--K--DVFEYTGGEF----------------EFKVMTLGQKFADVGYFIVPTGS 178 (279)
T ss_pred h-hcccCCCcEEEEcCCccccCchhh--h--hhhhhccCcc----------------ccccccHHHHHhhhHheecCCce
Confidence 2 234578999999999998642211 0 0012221100 001 156789999999999998
Q ss_pred EEEEeec
Q 017702 221 MVLILAA 227 (367)
Q Consensus 221 lvl~~~g 227 (367)
+.+...|
T Consensus 179 ~~~~yss 185 (279)
T PHA03411 179 AGFAYSG 185 (279)
T ss_pred EEEEEec
Confidence 8877666
|
|
| >PRK09489 rsmC 16S ribosomal RNA m2G1207 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.82 E-value=3.8e-05 Score=76.02 Aligned_cols=105 Identities=14% Similarity=0.248 Sum_probs=65.0
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCcc--ccceeeccCccc
Q 017702 64 FKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHA--RKYFAAGLPGSF 141 (367)
Q Consensus 64 ~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~--~~~f~~gvp~SF 141 (367)
-+|+|+|||+|..++.+.+. .| ..+|+..|....-....=+++... ..-+. .++.
T Consensus 198 g~VLDlGCG~G~ls~~la~~-----------------~p---~~~v~~vDis~~Al~~A~~nl~~n~l~~~~~---~~D~ 254 (342)
T PRK09489 198 GKVLDVGCGAGVLSAVLARH-----------------SP---KIRLTLSDVSAAALESSRATLAANGLEGEVF---ASNV 254 (342)
T ss_pred CeEEEeccCcCHHHHHHHHh-----------------CC---CCEEEEEECCHHHHHHHHHHHHHcCCCCEEE---Eccc
Confidence 48999999999988876522 13 456888887532211111111110 11122 2223
Q ss_pred cccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceE
Q 017702 142 HSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLM 221 (367)
Q Consensus 142 y~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~l 221 (367)
+.. .++.+|+|+|+-.+||.-.. ...+...|++.-++-|+|||.|
T Consensus 255 ~~~--~~~~fDlIvsNPPFH~g~~~---------------------------------~~~~~~~~i~~a~~~LkpgG~L 299 (342)
T PRK09489 255 FSD--IKGRFDMIISNPPFHDGIQT---------------------------------SLDAAQTLIRGAVRHLNSGGEL 299 (342)
T ss_pred ccc--cCCCccEEEECCCccCCccc---------------------------------cHHHHHHHHHHHHHhcCcCCEE
Confidence 332 35789999999999983211 0125567899999999999999
Q ss_pred EEEee
Q 017702 222 VLILA 226 (367)
Q Consensus 222 vl~~~ 226 (367)
+++..
T Consensus 300 ~iVan 304 (342)
T PRK09489 300 RIVAN 304 (342)
T ss_pred EEEEe
Confidence 88764
|
|
| >PRK15001 SAM-dependent 23S ribosomal RNA mG1835 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.82 E-value=5.4e-05 Score=75.79 Aligned_cols=105 Identities=20% Similarity=0.212 Sum_probs=63.5
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC----Ccc--ccceeecc
Q 017702 64 FKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL----PHA--RKYFAAGL 137 (367)
Q Consensus 64 ~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l----~~~--~~~f~~gv 137 (367)
.+|+|+|||+|..++.+.+. .| ..+|+..|...--....=.++ +.. +--|..+
T Consensus 230 ~~VLDLGCGtGvi~i~la~~-----------------~P---~~~V~~vD~S~~Av~~A~~N~~~n~~~~~~~v~~~~~- 288 (378)
T PRK15001 230 GEIVDLGCGNGVIGLTLLDK-----------------NP---QAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMIN- 288 (378)
T ss_pred CeEEEEeccccHHHHHHHHh-----------------CC---CCEEEEEECCHHHHHHHHHHHHHcCcccCceEEEEEc-
Confidence 59999999999988866522 23 457888888631111111111 100 1122222
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
..+..+ ++.++|+|+|+-.+|+...++. ....++++.-.+-|+|
T Consensus 289 --D~l~~~-~~~~fDlIlsNPPfh~~~~~~~---------------------------------~ia~~l~~~a~~~Lkp 332 (378)
T PRK15001 289 --NALSGV-EPFRFNAVLCNPPFHQQHALTD---------------------------------NVAWEMFHHARRCLKI 332 (378)
T ss_pred --cccccC-CCCCEEEEEECcCcccCccCCH---------------------------------HHHHHHHHHHHHhccc
Confidence 233333 5578999999989988543221 0122467777788999
Q ss_pred CceEEEEe
Q 017702 218 GGLMVLIL 225 (367)
Q Consensus 218 GG~lvl~~ 225 (367)
||.|+++.
T Consensus 333 GG~L~iV~ 340 (378)
T PRK15001 333 NGELYIVA 340 (378)
T ss_pred CCEEEEEE
Confidence 99999885
|
|
| >TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit | Back alignment and domain information |
|---|
Probab=97.81 E-value=9e-05 Score=60.98 Aligned_cols=22 Identities=36% Similarity=0.466 Sum_probs=19.0
Q ss_pred HHHHHHHHHhhccCceEEEEee
Q 017702 205 ESFLNARAEELVPGGLMVLILA 226 (367)
Q Consensus 205 ~~fL~~Ra~EL~pGG~lvl~~~ 226 (367)
..+++...+.|+|||++++.+.
T Consensus 102 ~~~l~~~~~~Lk~gG~li~~~~ 123 (124)
T TIGR02469 102 QEILEAIWRRLRPGGRIVLNAI 123 (124)
T ss_pred HHHHHHHHHHcCCCCEEEEEec
Confidence 3689999999999999998763
|
This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL. |
| >cd02440 AdoMet_MTases S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy) | Back alignment and domain information |
|---|
Probab=97.80 E-value=9.7e-05 Score=57.17 Aligned_cols=99 Identities=25% Similarity=0.308 Sum_probs=61.6
Q ss_pred EEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHh---hcCCccccceeeccCccc
Q 017702 65 KIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLF---KSLPHARKYFAAGLPGSF 141 (367)
Q Consensus 65 ~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf---~~l~~~~~~f~~gvp~SF 141 (367)
+|+|+|||.|.++..+.. . + ..+++..|+..+-....- ......+..|..+. +
T Consensus 1 ~ildig~G~G~~~~~~~~-----------~-------~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 56 (107)
T cd02440 1 RVLDLGCGTGALALALAS-----------G-------P---GARVTGVDISPVALELARKAAAALLADNVEVLKGD---A 56 (107)
T ss_pred CeEEEcCCccHHHHHHhc-----------C-------C---CCEEEEEeCCHHHHHHHHHHHhcccccceEEEEcC---h
Confidence 589999999998877652 0 1 235777787654333222 11111122233332 2
Q ss_pred cccC-CCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCce
Q 017702 142 HSRL-FPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGL 220 (367)
Q Consensus 142 y~~l-~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~ 220 (367)
.+.. .+.+++|+++++..++++ + .+...+++....-|+|||.
T Consensus 57 ~~~~~~~~~~~d~i~~~~~~~~~---~----------------------------------~~~~~~l~~~~~~l~~~g~ 99 (107)
T cd02440 57 EELPPEADESFDVIISDPPLHHL---V----------------------------------EDLARFLEEARRLLKPGGV 99 (107)
T ss_pred hhhccccCCceEEEEEccceeeh---h----------------------------------hHHHHHHHHHHHHcCCCCE
Confidence 2222 356789999999999885 1 1444677787888999999
Q ss_pred EEEE
Q 017702 221 MVLI 224 (367)
Q Consensus 221 lvl~ 224 (367)
+++.
T Consensus 100 ~~~~ 103 (107)
T cd02440 100 LVLT 103 (107)
T ss_pred EEEE
Confidence 9876
|
There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.). |
| >PRK04266 fibrillarin; Provisional | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00022 Score=66.55 Aligned_cols=21 Identities=24% Similarity=0.341 Sum_probs=17.7
Q ss_pred HHHHHHHhhccCceEEEEeec
Q 017702 207 FLNARAEELVPGGLMVLILAA 227 (367)
Q Consensus 207 fL~~Ra~EL~pGG~lvl~~~g 227 (367)
+|+.-++-|||||+++++...
T Consensus 158 ~L~~~~r~LKpGG~lvI~v~~ 178 (226)
T PRK04266 158 AIDNAEFFLKDGGYLLLAIKA 178 (226)
T ss_pred HHHHHHHhcCCCcEEEEEEec
Confidence 567777889999999998765
|
|
| >PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00016 Score=65.53 Aligned_cols=99 Identities=15% Similarity=0.188 Sum_probs=58.7
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchH---HHhhcCCccccceeeccCc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFN---TLFKSLPHARKYFAAGLPG 139 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn---~lf~~l~~~~~~f~~gvp~ 139 (367)
..+|+|+|||+|..++.+.... | ..+|+--|....--. ...+.....+--|..+...
T Consensus 46 g~~VLDiGcGtG~~al~la~~~-----------------~---~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~d~~ 105 (187)
T PRK00107 46 GERVLDVGSGAGFPGIPLAIAR-----------------P---ELKVTLVDSLGKKIAFLREVAAELGLKNVTVVHGRAE 105 (187)
T ss_pred CCeEEEEcCCCCHHHHHHHHHC-----------------C---CCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEeccHh
Confidence 5899999999999998876321 1 235666666532111 0111111111123333322
Q ss_pred cccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 140 SFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
+ +.+.+++|+++|... .++..|++..++-|+|||
T Consensus 106 ~----~~~~~~fDlV~~~~~------------------------------------------~~~~~~l~~~~~~LkpGG 139 (187)
T PRK00107 106 E----FGQEEKFDVVTSRAV------------------------------------------ASLSDLVELCLPLLKPGG 139 (187)
T ss_pred h----CCCCCCccEEEEccc------------------------------------------cCHHHHHHHHHHhcCCCe
Confidence 2 223678999998521 134468999999999999
Q ss_pred eEEEEeec
Q 017702 220 LMVLILAA 227 (367)
Q Consensus 220 ~lvl~~~g 227 (367)
++++..+.
T Consensus 140 ~lv~~~~~ 147 (187)
T PRK00107 140 RFLALKGR 147 (187)
T ss_pred EEEEEeCC
Confidence 99988643
|
|
| >PF05891 Methyltransf_PK: AdoMet dependent proline di-methyltransferase; InterPro: IPR008576 This family consists of several eukaryotic proteins of unknown function that are S-adenosyl-L-methionine-dependent methyltransferase-like | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00015 Score=66.87 Aligned_cols=142 Identities=20% Similarity=0.331 Sum_probs=79.3
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhh-cCCc----cccceee
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFK-SLPH----ARKYFAA 135 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~-~l~~----~~~~f~~ 135 (367)
.+..+.+|.|||.|.-|-.++... .+ +|-+-|.. -.|-.-.+ .+.+ -..+|..
T Consensus 54 ~~~~~alDcGAGIGRVTk~lLl~~--------------------f~-~VDlVEp~-~~Fl~~a~~~l~~~~~~v~~~~~~ 111 (218)
T PF05891_consen 54 PKFNRALDCGAGIGRVTKGLLLPV--------------------FD-EVDLVEPV-EKFLEQAKEYLGKDNPRVGEFYCV 111 (218)
T ss_dssp ---SEEEEET-TTTHHHHHTCCCC---------------------S-EEEEEES--HHHHHHHHHHTCCGGCCEEEEEES
T ss_pred CCcceEEecccccchhHHHHHHHh--------------------cC-EeEEeccC-HHHHHHHHHHhcccCCCcceEEec
Confidence 457999999999999998665111 01 22222222 12222222 1211 1245556
Q ss_pred ccCccccccCCCC-CceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHh
Q 017702 136 GLPGSFHSRLFPR-SSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEE 214 (367)
Q Consensus 136 gvp~SFy~~l~P~-~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~E 214 (367)
|. +..-|+ +..|+||.-||+-.|.+ .|+..||+++.+.
T Consensus 112 gL-----Q~f~P~~~~YDlIW~QW~lghLTD------------------------------------~dlv~fL~RCk~~ 150 (218)
T PF05891_consen 112 GL-----QDFTPEEGKYDLIWIQWCLGHLTD------------------------------------EDLVAFLKRCKQA 150 (218)
T ss_dssp -G-----GG----TT-EEEEEEES-GGGS-H------------------------------------HHHHHHHHHHHHH
T ss_pred CH-----hhccCCCCcEeEEEehHhhccCCH------------------------------------HHHHHHHHHHHHh
Confidence 63 444465 79999999888887664 4999999999999
Q ss_pred hccCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeE
Q 017702 215 LVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEK 294 (367)
Q Consensus 215 L~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~ 294 (367)
|+|||.+|+==-. ..++. .+++ +-| ....||.+.|+++++++| ++|.+
T Consensus 151 L~~~G~IvvKEN~-~~~~~--------~~~D------------------~~D----sSvTRs~~~~~~lF~~AG-l~~v~ 198 (218)
T PF05891_consen 151 LKPNGVIVVKENV-SSSGF--------DEFD------------------EED----SSVTRSDEHFRELFKQAG-LRLVK 198 (218)
T ss_dssp EEEEEEEEEEEEE-ESSSE--------EEEE------------------TTT----TEEEEEHHHHHHHHHHCT--EEEE
T ss_pred CcCCcEEEEEecC-CCCCC--------cccC------------------Ccc----CeeecCHHHHHHHHHHcC-CEEEE
Confidence 9999988773222 11110 0000 011 123789999999999997 88877
Q ss_pred EEE
Q 017702 295 MEK 297 (367)
Q Consensus 295 lE~ 297 (367)
-+.
T Consensus 199 ~~~ 201 (218)
T PF05891_consen 199 EEK 201 (218)
T ss_dssp EEE
T ss_pred ecc
Confidence 654
|
; GO: 0008168 methyltransferase activity; PDB: 1XTP_A 2EX4_B. |
| >TIGR00438 rrmJ cell division protein FtsJ | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.0002 Score=64.40 Aligned_cols=25 Identities=28% Similarity=0.259 Sum_probs=21.1
Q ss_pred hHHHHHHHHHHhhccCceEEEEeec
Q 017702 203 DMESFLNARAEELVPGGLMVLILAA 227 (367)
Q Consensus 203 D~~~fL~~Ra~EL~pGG~lvl~~~g 227 (367)
+...+|+.-.+-|+|||++++..+.
T Consensus 124 ~~~~~l~~~~~~LkpgG~lvi~~~~ 148 (188)
T TIGR00438 124 LVELALDIAKEVLKPKGNFVVKVFQ 148 (188)
T ss_pred HHHHHHHHHHHHccCCCEEEEEEcc
Confidence 5667899999999999999997654
|
|
| >PLN02232 ubiquinone biosynthesis methyltransferase | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00023 Score=62.65 Aligned_cols=47 Identities=17% Similarity=0.211 Sum_probs=39.0
Q ss_pred CCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEEEEe
Q 017702 146 FPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLIL 225 (367)
Q Consensus 146 ~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~ 225 (367)
++++++|++++++++||+. |...+|+.-++-|||||+|++.-
T Consensus 40 ~~~~~fD~v~~~~~l~~~~--------------------------------------d~~~~l~ei~rvLkpGG~l~i~d 81 (160)
T PLN02232 40 FDDCEFDAVTMGYGLRNVV--------------------------------------DRLRAMKEMYRVLKPGSRVSILD 81 (160)
T ss_pred CCCCCeeEEEecchhhcCC--------------------------------------CHHHHHHHHHHHcCcCeEEEEEE
Confidence 4678999999999999964 33468899999999999999988
Q ss_pred ecccCC
Q 017702 226 AAVVPD 231 (367)
Q Consensus 226 ~g~~~n 231 (367)
++ .++
T Consensus 82 ~~-~~~ 86 (160)
T PLN02232 82 FN-KSN 86 (160)
T ss_pred CC-CCC
Confidence 77 544
|
|
| >PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00026 Score=64.83 Aligned_cols=78 Identities=12% Similarity=0.048 Sum_probs=42.5
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc---c-ccceeeccC
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH---A-RKYFAAGLP 138 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~---~-~~~f~~gvp 138 (367)
..+|+|+|||+|..|..+.+.+ . .. . +|+--|.-.+--...=+++.. . +-.+..+.
T Consensus 73 ~~~VLDiG~GsG~~~~~la~~~--------~-------~~---g-~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d- 132 (205)
T PRK13944 73 GMKILEVGTGSGYQAAVCAEAI--------E-------RR---G-KVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGD- 132 (205)
T ss_pred CCEEEEECcCccHHHHHHHHhc--------C-------CC---C-EEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECC-
Confidence 4799999999999998776432 0 01 1 456555543211111111111 1 11233333
Q ss_pred ccccccCCCCCceeEEEecccccc
Q 017702 139 GSFHSRLFPRSSIHFVHTSYALHW 162 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~~alhW 162 (367)
+.+-+.+.+++|.+++..++++
T Consensus 133 --~~~~~~~~~~fD~Ii~~~~~~~ 154 (205)
T PRK13944 133 --GKRGLEKHAPFDAIIVTAAAST 154 (205)
T ss_pred --cccCCccCCCccEEEEccCcch
Confidence 3333334578999999988776
|
|
| >TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00027 Score=65.03 Aligned_cols=21 Identities=14% Similarity=0.343 Sum_probs=17.8
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAVQ 82 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~ 82 (367)
...+|+|+|||+|.+|..+..
T Consensus 77 ~~~~VLDiG~GsG~~a~~la~ 97 (215)
T TIGR00080 77 PGMKVLEIGTGSGYQAAVLAE 97 (215)
T ss_pred CcCEEEEECCCccHHHHHHHH
Confidence 347999999999999987763
|
Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt. |
| >PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00027 Score=65.13 Aligned_cols=21 Identities=14% Similarity=0.400 Sum_probs=17.7
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAVQ 82 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~ 82 (367)
+..+|+|+|||+|..|..+..
T Consensus 76 ~g~~VLdIG~GsG~~t~~la~ 96 (212)
T PRK13942 76 EGMKVLEIGTGSGYHAAVVAE 96 (212)
T ss_pred CcCEEEEECCcccHHHHHHHH
Confidence 347999999999999977763
|
|
| >PRK14121 tRNA (guanine-N(7)-)-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00032 Score=70.32 Aligned_cols=111 Identities=18% Similarity=0.266 Sum_probs=65.9
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc---cccceeeccCc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH---ARKYFAAGLPG 139 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~---~~~~f~~gvp~ 139 (367)
.-+++|+|||+|..++.+... .| +..++--|.-..-....-+.+.. .+-.++.+...
T Consensus 123 ~p~vLEIGcGsG~~ll~lA~~-----------------~P---~~~~iGIEI~~~~i~~a~~ka~~~gL~NV~~i~~DA~ 182 (390)
T PRK14121 123 EKILIEIGFGSGRHLLYQAKN-----------------NP---NKLFIGIEIHTPSIEQVLKQIELLNLKNLLIINYDAR 182 (390)
T ss_pred CCeEEEEcCcccHHHHHHHHh-----------------CC---CCCEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHH
Confidence 358999999999999887632 12 33455555433222222222111 11123333322
Q ss_pred cccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 140 SFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
-+. ..+|++++|.+++++...|..+.. .++ -...||..-++-|+|||
T Consensus 183 ~ll-~~~~~~s~D~I~lnFPdPW~KkrH-------------RRl-------------------v~~~fL~e~~RvLkpGG 229 (390)
T PRK14121 183 LLL-ELLPSNSVEKIFVHFPVPWDKKPH-------------RRV-------------------ISEDFLNEALRVLKPGG 229 (390)
T ss_pred Hhh-hhCCCCceeEEEEeCCCCccccch-------------hhc-------------------cHHHHHHHHHHHcCCCc
Confidence 222 357899999999988888833211 011 12468999999999999
Q ss_pred eEEEEee
Q 017702 220 LMVLILA 226 (367)
Q Consensus 220 ~lvl~~~ 226 (367)
.+.+.+=
T Consensus 230 ~l~l~TD 236 (390)
T PRK14121 230 TLELRTD 236 (390)
T ss_pred EEEEEEE
Confidence 9888773
|
|
| >PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00044 Score=63.32 Aligned_cols=20 Identities=10% Similarity=0.222 Sum_probs=16.8
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAV 81 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~ 81 (367)
+..+|+|+|||+|..|..+.
T Consensus 78 ~~~~VLeiG~GsG~~t~~la 97 (212)
T PRK00312 78 PGDRVLEIGTGSGYQAAVLA 97 (212)
T ss_pred CCCEEEEECCCccHHHHHHH
Confidence 45799999999999998554
|
|
| >TIGR03534 RF_mod_PrmC protein-(glutamine-N5) methyltransferase, release factor-specific | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0002 Score=66.83 Aligned_cols=127 Identities=14% Similarity=0.201 Sum_probs=66.6
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC---ccccceeeccCc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP---HARKYFAAGLPG 139 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~---~~~~~f~~gvp~ 139 (367)
..+|+|+|||+|..++.+.... | ..+++-.|.-..-....-+.+. ..+--+.. +
T Consensus 88 ~~~ilDig~G~G~~~~~l~~~~-----------------~---~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~---~ 144 (251)
T TIGR03534 88 PLRVLDLGTGSGAIALALAKER-----------------P---DARVTAVDISPEALAVARKNAARLGLDNVTFLQ---S 144 (251)
T ss_pred CCeEEEEeCcHhHHHHHHHHHC-----------------C---CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEE---C
Confidence 4689999999999888776321 2 2367777765322222211111 11112222 3
Q ss_pred cccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 140 SFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
++.+ .++++++|+++|+--.+..+.... + .+ .+. ...|...-.-......++..|++.-.+.|+|||
T Consensus 145 d~~~-~~~~~~fD~Vi~npPy~~~~~~~~-~--------~~-~~~--~~e~~~~~~~~~~~~~~~~~~i~~~~~~L~~gG 211 (251)
T TIGR03534 145 DWFE-PLPGGKFDLIVSNPPYIPEADIHL-L--------DP-EVR--FHEPRLALFGGEDGLDFYRRIIAQAPRLLKPGG 211 (251)
T ss_pred chhc-cCcCCceeEEEECCCCCchhhhhh-c--------Ch-hhh--hcCCHHHHcCCCcHHHHHHHHHHHHHHhcccCC
Confidence 3443 457789999999644443221110 0 00 000 000000000011223466789999999999999
Q ss_pred eEEEEe
Q 017702 220 LMVLIL 225 (367)
Q Consensus 220 ~lvl~~ 225 (367)
.+++..
T Consensus 212 ~~~~~~ 217 (251)
T TIGR03534 212 WLLLEI 217 (251)
T ss_pred EEEEEE
Confidence 998865
|
Members of this protein family are HemK (PrmC), a protein once thought to be involved in heme biosynthesis but now recognized to be a protein-glutamine methyltransferase that modifies the peptide chain release factors. All members of the seed alignment are encoded next to the release factor 1 gene (prfA) and confirmed by phylogenetic analysis. SIMBAL analysis (manuscript in prep.) shows the motif [LIV]PRx[DE]TE (in Escherichia coli, IPRPDTE) confers specificity for the release factors rather than for ribosomal protein L3. |
| >TIGR03533 L3_gln_methyl protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00081 Score=64.83 Aligned_cols=121 Identities=16% Similarity=0.166 Sum_probs=64.0
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc----cccceeeccC
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH----ARKYFAAGLP 138 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~----~~~~f~~gvp 138 (367)
..+|+|+|||+|..++.+.... | ..+++-.|....-....-++... .+--|..+
T Consensus 122 ~~~vLDlG~GsG~i~~~la~~~-----------------~---~~~v~avDis~~al~~A~~n~~~~~~~~~i~~~~~-- 179 (284)
T TIGR03533 122 VKRILDLCTGSGCIAIACAYAF-----------------P---EAEVDAVDISPDALAVAEINIERHGLEDRVTLIQS-- 179 (284)
T ss_pred CCEEEEEeCchhHHHHHHHHHC-----------------C---CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC--
Confidence 4689999999999998876322 2 23677777753221111111110 11123333
Q ss_pred ccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHH----HHHH--HHHHhhHHHHHHHHH
Q 017702 139 GSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVV----RAYS--TQYKNDMESFLNARA 212 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~----~~y~--~Q~~~D~~~fL~~Ra 212 (367)
++.+. +|++++|+++|+ |+-+...... ..++++. .|.. +......+.|++.-.
T Consensus 180 -D~~~~-~~~~~fD~Iv~N---------PPy~~~~~~~----------~l~~~~~~ep~~al~gg~dGl~~~~~il~~a~ 238 (284)
T TIGR03533 180 -DLFAA-LPGRKYDLIVSN---------PPYVDAEDMA----------DLPAEYHHEPELALASGEDGLDLVRRILAEAA 238 (284)
T ss_pred -chhhc-cCCCCccEEEEC---------CCCCCccchh----------hCCHhhhcCHHHHhcCCCcHHHHHHHHHHHHH
Confidence 23333 366689999995 4433211100 0111110 0000 011234456888888
Q ss_pred HhhccCceEEEEee
Q 017702 213 EELVPGGLMVLILA 226 (367)
Q Consensus 213 ~EL~pGG~lvl~~~ 226 (367)
+-|+|||++++++.
T Consensus 239 ~~L~~gG~l~~e~g 252 (284)
T TIGR03533 239 DHLNENGVLVVEVG 252 (284)
T ss_pred HhcCCCCEEEEEEC
Confidence 99999999998874
|
Members of this protein family methylate ribosomal protein L3 on a glutamine side chain. This family is related to HemK, a protein-glutamine methyltranferase for peptide chain release factors. |
| >COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00024 Score=66.26 Aligned_cols=99 Identities=25% Similarity=0.284 Sum_probs=60.2
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccc----cceeeccC
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHAR----KYFAAGLP 138 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~----~~f~~gvp 138 (367)
-.+|+|+|||-|..|..+.. . -..|+-.|+..-.- ..-+.-.... .|-...
T Consensus 60 g~~vLDvGCGgG~Lse~mAr------------~----------Ga~VtgiD~se~~I-~~Ak~ha~e~gv~i~y~~~~-- 114 (243)
T COG2227 60 GLRVLDVGCGGGILSEPLAR------------L----------GASVTGIDASEKPI-EVAKLHALESGVNIDYRQAT-- 114 (243)
T ss_pred CCeEEEecCCccHhhHHHHH------------C----------CCeeEEecCChHHH-HHHHHhhhhccccccchhhh--
Confidence 48999999999988887752 1 12466666653110 0111000000 011111
Q ss_pred ccccccCC-CCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 139 GSFHSRLF-PRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 139 ~SFy~~l~-P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
-+.|. ..+++|+|.|.-.|+- +|. =..|++.+++-+||
T Consensus 115 ---~edl~~~~~~FDvV~cmEVlEH---v~d-----------------------------------p~~~~~~c~~lvkP 153 (243)
T COG2227 115 ---VEDLASAGGQFDVVTCMEVLEH---VPD-----------------------------------PESFLRACAKLVKP 153 (243)
T ss_pred ---HHHHHhcCCCccEEEEhhHHHc---cCC-----------------------------------HHHHHHHHHHHcCC
Confidence 12333 3379999998555554 553 23599999999999
Q ss_pred CceEEEEeec
Q 017702 218 GGLMVLILAA 227 (367)
Q Consensus 218 GG~lvl~~~g 227 (367)
||.+++++..
T Consensus 154 ~G~lf~STin 163 (243)
T COG2227 154 GGILFLSTIN 163 (243)
T ss_pred CcEEEEeccc
Confidence 9999999986
|
|
| >PRK14967 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0039 Score=57.65 Aligned_cols=122 Identities=15% Similarity=0.130 Sum_probs=62.7
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC--ccccceeeccCcc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP--HARKYFAAGLPGS 140 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~--~~~~~f~~gvp~S 140 (367)
.-+|+|+|||+|..++.+... + .-+++..|....-....-+++. ..+-.+. -++
T Consensus 37 ~~~vLDlGcG~G~~~~~la~~------------------~---~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~---~~d 92 (223)
T PRK14967 37 GRRVLDLCTGSGALAVAAAAA------------------G---AGSVTAVDISRRAVRSARLNALLAGVDVDVR---RGD 92 (223)
T ss_pred CCeEEEecCCHHHHHHHHHHc------------------C---CCeEEEEECCHHHHHHHHHHHHHhCCeeEEE---ECc
Confidence 369999999999998876521 0 0145666665321111111111 0111122 234
Q ss_pred ccccCCCCCceeEEEeccccccccCCCccccCC-CCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 141 FHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDP-CSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 141 Fy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~-~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
+.. .++.+++|+++++--.+.-+... ..++ ..-+|+.| .. ...++..|+..-.+-|+|||
T Consensus 93 ~~~-~~~~~~fD~Vi~npPy~~~~~~~--~~~~~~~~~~~~~------~~----------~~~~~~~~l~~a~~~Lk~gG 153 (223)
T PRK14967 93 WAR-AVEFRPFDVVVSNPPYVPAPPDA--PPSRGPARAWDAG------PD----------GRAVLDRLCDAAPALLAPGG 153 (223)
T ss_pred hhh-hccCCCeeEEEECCCCCCCCccc--ccccChhHhhhCC------Cc----------HHHHHHHHHHHHHHhcCCCc
Confidence 444 35778999999964332211110 0000 00011110 00 11345678888889999999
Q ss_pred eEEEEeec
Q 017702 220 LMVLILAA 227 (367)
Q Consensus 220 ~lvl~~~g 227 (367)
++++....
T Consensus 154 ~l~~~~~~ 161 (223)
T PRK14967 154 SLLLVQSE 161 (223)
T ss_pred EEEEEEec
Confidence 99877654
|
|
| >COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0026 Score=57.41 Aligned_cols=25 Identities=36% Similarity=0.511 Sum_probs=21.0
Q ss_pred hHHHHHHHHHHhhccCceEEEEeec
Q 017702 203 DMESFLNARAEELVPGGLMVLILAA 227 (367)
Q Consensus 203 D~~~fL~~Ra~EL~pGG~lvl~~~g 227 (367)
.+...|+...+-|+|||++|++..-
T Consensus 113 ~i~~ile~~~~~l~~ggrlV~nait 137 (187)
T COG2242 113 NIEEILEAAWERLKPGGRLVANAIT 137 (187)
T ss_pred CHHHHHHHHHHHcCcCCeEEEEeec
Confidence 3446888888999999999999875
|
|
| >PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00071 Score=55.38 Aligned_cols=24 Identities=42% Similarity=0.634 Sum_probs=21.1
Q ss_pred hHHHHHHHHHHhhccCceEEEEee
Q 017702 203 DMESFLNARAEELVPGGLMVLILA 226 (367)
Q Consensus 203 D~~~fL~~Ra~EL~pGG~lvl~~~ 226 (367)
+...|++.-.+-|+|||.+++.++
T Consensus 93 ~~~~~~~~~~~~L~~gG~~~~~~~ 116 (117)
T PF13659_consen 93 LYSRFLEAAARLLKPGGVLVFITP 116 (117)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCeEEEEEeC
Confidence 566799999999999999998875
|
... |
| >PF05148 Methyltransf_8: Hypothetical methyltransferase; InterPro: IPR007823 This family consists of uncharacterised eukaryotic proteins which are related to S-adenosyl-L-methionine-dependent methyltransferases | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0018 Score=59.42 Aligned_cols=89 Identities=19% Similarity=0.227 Sum_probs=48.8
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCc-cchHHHhhcCCccccceeeccCc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSD-NDFNTLFKSLPHARKYFAAGLPG 139 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~-NDFn~lf~~l~~~~~~f~~gvp~ 139 (367)
++..+|||+|||.+..+..+ . . .+.|+-=||.. |+. +-++-
T Consensus 71 ~~~~viaD~GCGdA~la~~~--------~------------~---~~~V~SfDLva~n~~------------Vtacd--- 112 (219)
T PF05148_consen 71 PKSLVIADFGCGDAKLAKAV--------P------------N---KHKVHSFDLVAPNPR------------VTACD--- 112 (219)
T ss_dssp -TTS-EEEES-TT-HHHHH----------------------S------EEEEESS-SSTT------------EEES----
T ss_pred CCCEEEEECCCchHHHHHhc--------c------------c---CceEEEeeccCCCCC------------EEEec---
Confidence 45689999999998877322 1 1 22455556653 221 11111
Q ss_pred cccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 140 SFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
.-+--++++|+|+++.+-+|.= .||..||.--.+-|||||
T Consensus 113 -ia~vPL~~~svDv~VfcLSLMG---------------------------------------Tn~~~fi~EA~RvLK~~G 152 (219)
T PF05148_consen 113 -IANVPLEDESVDVAVFCLSLMG---------------------------------------TNWPDFIREANRVLKPGG 152 (219)
T ss_dssp -TTS-S--TT-EEEEEEES---S---------------------------------------S-HHHHHHHHHHHEEEEE
T ss_pred -CccCcCCCCceeEEEEEhhhhC---------------------------------------CCcHHHHHHHHheeccCc
Confidence 1223358899999988655532 278889999999999999
Q ss_pred eEEEEeec
Q 017702 220 LMVLILAA 227 (367)
Q Consensus 220 ~lvl~~~g 227 (367)
.|.+.=.-
T Consensus 153 ~L~IAEV~ 160 (219)
T PF05148_consen 153 ILKIAEVK 160 (219)
T ss_dssp EEEEEEEG
T ss_pred EEEEEEec
Confidence 99887664
|
; GO: 0008168 methyltransferase activity; PDB: 2ZFU_B. |
| >PF07021 MetW: Methionine biosynthesis protein MetW; InterPro: IPR010743 This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00067 Score=61.47 Aligned_cols=94 Identities=24% Similarity=0.274 Sum_probs=62.3
Q ss_pred CCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEEEE
Q 017702 145 LFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLI 224 (367)
Q Consensus 145 l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~ 224 (367)
-||++|+|.++-+-|||=+.+ |. ..|+ +-|+-|...+++
T Consensus 70 ~f~d~sFD~VIlsqtLQ~~~~-P~-------------------------------------~vL~---EmlRVgr~~IVs 108 (193)
T PF07021_consen 70 DFPDQSFDYVILSQTLQAVRR-PD-------------------------------------EVLE---EMLRVGRRAIVS 108 (193)
T ss_pred hCCCCCccEEehHhHHHhHhH-HH-------------------------------------HHHH---HHHHhcCeEEEE
Confidence 379999999999999998764 32 1232 446778888888
Q ss_pred eecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcc------cCCHHHHHHHHHhCCceEEeEEEEE
Q 017702 225 LAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTY------NATPKELEAIIRTNGNFTIEKMEKL 298 (367)
Q Consensus 225 ~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y------~~s~eE~~~~l~~~g~F~I~~lE~~ 298 (367)
|+. -+ .|. .-..|.-.|..+..+ .+..+|| +.|..+++++.++.| ++|++-..+
T Consensus 109 FPN-Fg------------~W~----~R~~l~~~GrmPvt~--~lPy~WYdTPNih~~Ti~DFe~lc~~~~-i~I~~~~~~ 168 (193)
T PF07021_consen 109 FPN-FG------------HWR----NRLQLLLRGRMPVTK--ALPYEWYDTPNIHLCTIKDFEDLCRELG-IRIEERVFL 168 (193)
T ss_pred ecC-hH------------HHH----HHHHHHhcCCCCCCC--CCCCcccCCCCcccccHHHHHHHHHHCC-CEEEEEEEE
Confidence 864 11 133 122444467665543 2333444 579999999999986 888876655
Q ss_pred e
Q 017702 299 S 299 (367)
Q Consensus 299 ~ 299 (367)
.
T Consensus 169 ~ 169 (193)
T PF07021_consen 169 D 169 (193)
T ss_pred c
Confidence 4
|
Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalysed by the products of the metXW genes and is equivalent to the first step in enterobacteria, Gram-positive bacteria and fungi, except that in these microorganisms the reaction is catalysed by a single polypeptide (the product of the metA gene in Escherichia coli and the met5 gene product in Neurospora crassa). In P. putida, as in Gram-positive bacteria and certain fungi, the second and third steps are a direct sulphydrylation that converts the O-acyl-L-homoserine into homocysteine and further methylation to yield methionine. The latter reaction can be mediated by either of the two methionine synthetases present in the cells []. |
| >PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0012 Score=62.23 Aligned_cols=22 Identities=27% Similarity=0.308 Sum_probs=17.2
Q ss_pred HHHHHHHHhhccCceEEEEeec
Q 017702 206 SFLNARAEELVPGGLMVLILAA 227 (367)
Q Consensus 206 ~fL~~Ra~EL~pGG~lvl~~~g 227 (367)
.++..-.+-|+|||+++++...
T Consensus 194 ~l~~~~~~~LkpgG~lilsgi~ 215 (250)
T PRK00517 194 ELAPDLARLLKPGGRLILSGIL 215 (250)
T ss_pred HHHHHHHHhcCCCcEEEEEECc
Confidence 4666677889999999987654
|
|
| >PF03291 Pox_MCEL: mRNA capping enzyme; InterPro: IPR004971 This is a family of viral mRNA capping enzymes | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0011 Score=65.30 Aligned_cols=45 Identities=22% Similarity=0.402 Sum_probs=34.9
Q ss_pred CceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEEEEeec
Q 017702 149 SSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAA 227 (367)
Q Consensus 149 ~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g 227 (367)
..+|+|=+-+|||+.=.- +.-.+.||+.-++-|+|||+|+.+++.
T Consensus 144 ~~FDvVScQFalHY~Fes----------------------------------e~~ar~~l~Nvs~~Lk~GG~FIgT~~d 188 (331)
T PF03291_consen 144 RKFDVVSCQFALHYAFES----------------------------------EEKARQFLKNVSSLLKPGGYFIGTTPD 188 (331)
T ss_dssp S-EEEEEEES-GGGGGSS----------------------------------HHHHHHHHHHHHHTEEEEEEEEEEEE-
T ss_pred CCcceeehHHHHHHhcCC----------------------------------HHHHHHHHHHHHHhcCCCCEEEEEecC
Confidence 599999999999994421 124457999999999999999999984
|
The enzyme catalyses the first two reactions in the mRNA cap formation pathway. It is a heterodimer consisting of a large and small subunit. This entry is the large subunit. ; GO: 0006370 mRNA capping; PDB: 3EPP_A 3BGV_C 2VDW_C 1RI5_A 1RI3_A 1RI1_A 1Z3C_A 1RI2_A 2HV9_A 1RI4_A. |
| >TIGR00406 prmA ribosomal protein L11 methyltransferase | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0011 Score=64.00 Aligned_cols=22 Identities=18% Similarity=0.282 Sum_probs=18.0
Q ss_pred HHHHHHHHhhccCceEEEEeec
Q 017702 206 SFLNARAEELVPGGLMVLILAA 227 (367)
Q Consensus 206 ~fL~~Ra~EL~pGG~lvl~~~g 227 (367)
.++..-.+-|+|||+++++...
T Consensus 240 ~ll~~~~~~LkpgG~li~sgi~ 261 (288)
T TIGR00406 240 ELYPQFSRLVKPGGWLILSGIL 261 (288)
T ss_pred HHHHHHHHHcCCCcEEEEEeCc
Confidence 4666777889999999998776
|
Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis. |
| >PRK11805 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0015 Score=63.74 Aligned_cols=23 Identities=17% Similarity=0.375 Sum_probs=19.0
Q ss_pred HHHHHHHHHHhhccCceEEEEee
Q 017702 204 MESFLNARAEELVPGGLMVLILA 226 (367)
Q Consensus 204 ~~~fL~~Ra~EL~pGG~lvl~~~ 226 (367)
.+.+++.-.+-|+|||++++...
T Consensus 242 ~~~i~~~a~~~L~pgG~l~~E~g 264 (307)
T PRK11805 242 VRRILAEAPDYLTEDGVLVVEVG 264 (307)
T ss_pred HHHHHHHHHHhcCCCCEEEEEEC
Confidence 34588888889999999998764
|
|
| >KOG3178 consensus Hydroxyindole-O-methyltransferase and related SAM-dependent methyltransferases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0052 Score=60.32 Aligned_cols=190 Identities=17% Similarity=0.224 Sum_probs=110.1
Q ss_pred ccCCCCCchHHHhhHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCceEEeeecCCCCcccHHHHHHHHHHHHHHHHh
Q 017702 15 MVGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQR 94 (367)
Q Consensus 15 M~gg~g~~sY~~nS~~Q~~~~~~~~~ll~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~ 94 (367)
|.||-|..+|.-+-..|+... ....++.+.+.++.. +....-..+|.|-|.|..+-.+++.
T Consensus 138 ~l~~~~~~~~~~~~~~~~sm~-~l~~~~~~~il~~~~-------Gf~~v~~avDvGgGiG~v~k~ll~~----------- 198 (342)
T KOG3178|consen 138 MLGGYGGADERFSKDFNGSMS-FLSTLVMKKILEVYT-------GFKGVNVAVDVGGGIGRVLKNLLSK----------- 198 (342)
T ss_pred hhhhhcccccccHHHHHHHHH-HHHHHHHHhhhhhhc-------ccccCceEEEcCCcHhHHHHHHHHh-----------
Confidence 567656555544444444432 223333333322221 1345788999999999998887741
Q ss_pred ccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccce--eeccCccccccCCCCCceeEEEeccccccccCCCccccC
Q 017702 95 TTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYF--AAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVD 172 (367)
Q Consensus 95 ~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f--~~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~ 172 (367)
-| .|..+-=|+|. +...-+ .+. +--+.|.+++. .|++- +||.-|+||-+.
T Consensus 199 ------fp---~ik~infdlp~-----v~~~a~---~~~~gV~~v~gdmfq~-~P~~d--aI~mkWiLhdwt-------- 250 (342)
T KOG3178|consen 199 ------YP---HIKGINFDLPF-----VLAAAP---YLAPGVEHVAGDMFQD-TPKGD--AIWMKWILHDWT-------- 250 (342)
T ss_pred ------CC---CCceeecCHHH-----HHhhhh---hhcCCcceeccccccc-CCCcC--eEEEEeecccCC--------
Confidence 24 45666667763 111111 111 33366678888 88665 999988888322
Q ss_pred CCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEEEEeecccCCCCCCCC--CchhhHHHHHHHH
Q 017702 173 PCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIPLSN--SYVGVFNNILGSC 250 (367)
Q Consensus 173 ~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g~~~n~~~~~~--~~~~~~~~~l~~a 250 (367)
.+|..+||+++++-|+|||.+++.=.- .+.+..... .......+.+-.+
T Consensus 251 ----------------------------DedcvkiLknC~~sL~~~GkIiv~E~V-~p~e~~~dd~~s~v~~~~d~lm~~ 301 (342)
T KOG3178|consen 251 ----------------------------DEDCVKILKNCKKSLPPGGKIIVVENV-TPEEDKFDDIDSSVTRDMDLLMLT 301 (342)
T ss_pred ----------------------------hHHHHHHHHHHHHhCCCCCEEEEEecc-CCCCCCccccccceeehhHHHHHH
Confidence 148889999999999999998876552 222111110 0111112222222
Q ss_pred HHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEE
Q 017702 251 FNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKL 298 (367)
Q Consensus 251 l~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~ 298 (367)
+. .-|+ -++.+|++..+.++| |.+-.+-..
T Consensus 302 ~~---~~Gk--------------ert~~e~q~l~~~~g-F~~~~~~~~ 331 (342)
T KOG3178|consen 302 QT---SGGK--------------ERTLKEFQALLPEEG-FPVCMVALT 331 (342)
T ss_pred Hh---ccce--------------eccHHHHHhcchhhc-CceeEEEec
Confidence 22 2243 678999999999886 887665443
|
|
| >TIGR00536 hemK_fam HemK family putative methylases | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0017 Score=62.39 Aligned_cols=25 Identities=16% Similarity=0.357 Sum_probs=21.0
Q ss_pred hHHHHHHHHHHhhccCceEEEEeec
Q 017702 203 DMESFLNARAEELVPGGLMVLILAA 227 (367)
Q Consensus 203 D~~~fL~~Ra~EL~pGG~lvl~~~g 227 (367)
+.+.+++.-.+-|+|||+|+++...
T Consensus 222 ~~~~ii~~a~~~L~~gG~l~~e~g~ 246 (284)
T TIGR00536 222 ILRQIIELAPDYLKPNGFLVCEIGN 246 (284)
T ss_pred HHHHHHHHHHHhccCCCEEEEEECc
Confidence 5667888888999999999988854
|
The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. Both E. coli and H. influenzae have two members rather than one. The members from the Mycoplasmas have an additional C-terminal domain. |
| >TIGR03704 PrmC_rel_meth putative protein-(glutamine-N5) methyltransferase, unknown substrate-specific | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0062 Score=57.66 Aligned_cols=23 Identities=17% Similarity=0.388 Sum_probs=19.2
Q ss_pred HHHHHHHHHHhhccCceEEEEee
Q 017702 204 MESFLNARAEELVPGGLMVLILA 226 (367)
Q Consensus 204 ~~~fL~~Ra~EL~pGG~lvl~~~ 226 (367)
+..++..-.+-|+|||++++...
T Consensus 195 ~~~i~~~a~~~L~~gG~l~l~~~ 217 (251)
T TIGR03704 195 LRRVAAGAPDWLAPGGHLLVETS 217 (251)
T ss_pred HHHHHHHHHHhcCCCCEEEEEEC
Confidence 45688888889999999998874
|
This protein family is closely related to two different families of protein-(glutamine-N5) methyltransferase. The first is PrmB, which modifies ribosomal protein L3 in some bacteria. The second is PrmC (HemK), which modifies peptide chain release factors 1 and 2 in most bacteria and also in eukaryotes. The glutamine side chain-binding motif NPPY shared by PrmB and PrmC is N[VAT]PY in this family. The protein substrate is unknown. |
| >PRK14968 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.007 Score=53.60 Aligned_cols=25 Identities=28% Similarity=0.589 Sum_probs=20.4
Q ss_pred hHHHHHHHHHHhhccCceEEEEeec
Q 017702 203 DMESFLNARAEELVPGGLMVLILAA 227 (367)
Q Consensus 203 D~~~fL~~Ra~EL~pGG~lvl~~~g 227 (367)
.+..|++...+-|+|||.+++....
T Consensus 126 ~~~~~i~~~~~~Lk~gG~~~~~~~~ 150 (188)
T PRK14968 126 VIDRFLDEVGRYLKPGGRILLLQSS 150 (188)
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEcc
Confidence 3567889999999999999887654
|
|
| >PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0043 Score=56.34 Aligned_cols=20 Identities=40% Similarity=0.537 Sum_probs=17.2
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAV 81 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~ 81 (367)
...+|+|+|||+|..++.+.
T Consensus 40 ~~~~vlDlG~GtG~~s~~~a 59 (198)
T PRK00377 40 KGDMILDIGCGTGSVTVEAS 59 (198)
T ss_pred CcCEEEEeCCcCCHHHHHHH
Confidence 44799999999999998765
|
|
| >PRK00811 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0016 Score=62.69 Aligned_cols=109 Identities=13% Similarity=0.145 Sum_probs=64.5
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchH---HHhhcC-----Cccccc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFN---TLFKSL-----PHARKY 132 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn---~lf~~l-----~~~~~~ 132 (367)
+++.+|+|+|||+|..+..+++.- .. + +|...|+-.+=-. ..|..+ ...+--
T Consensus 75 ~~p~~VL~iG~G~G~~~~~~l~~~----------------~~---~-~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~ 134 (283)
T PRK00811 75 PNPKRVLIIGGGDGGTLREVLKHP----------------SV---E-KITLVEIDERVVEVCRKYLPEIAGGAYDDPRVE 134 (283)
T ss_pred CCCCEEEEEecCchHHHHHHHcCC----------------CC---C-EEEEEeCCHHHHHHHHHHhHHhccccccCCceE
Confidence 456799999999999988775210 01 2 4556565431111 111111 112234
Q ss_pred eeeccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHH
Q 017702 133 FAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARA 212 (367)
Q Consensus 133 f~~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra 212 (367)
+..+++..|... +++++|+|++-.+-+| .|. ..-| -..|++...
T Consensus 135 v~~~Da~~~l~~--~~~~yDvIi~D~~dp~---~~~------------------------~~l~-------t~ef~~~~~ 178 (283)
T PRK00811 135 LVIGDGIKFVAE--TENSFDVIIVDSTDPV---GPA------------------------EGLF-------TKEFYENCK 178 (283)
T ss_pred EEECchHHHHhh--CCCcccEEEECCCCCC---Cch------------------------hhhh-------HHHHHHHHH
Confidence 566776666655 5789999999665444 110 0111 135888888
Q ss_pred HhhccCceEEEEe
Q 017702 213 EELVPGGLMVLIL 225 (367)
Q Consensus 213 ~EL~pGG~lvl~~ 225 (367)
+-|+|||+|++..
T Consensus 179 ~~L~~gGvlv~~~ 191 (283)
T PRK00811 179 RALKEDGIFVAQS 191 (283)
T ss_pred HhcCCCcEEEEeC
Confidence 9999999998754
|
|
| >PRK14903 16S rRNA methyltransferase B; Provisional | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0028 Score=64.67 Aligned_cols=125 Identities=11% Similarity=0.096 Sum_probs=71.3
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc---cccceeeccCc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH---ARKYFAAGLPG 139 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~---~~~~f~~gvp~ 139 (367)
..+|+|+|||+|.-|..+.... .+ .-+|+-.|+..+-...+=+++.. ..-.+..+...
T Consensus 238 g~~VLD~cagpGgkt~~la~~~----------------~~---~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~~~~~Da~ 298 (431)
T PRK14903 238 GLRVLDTCAAPGGKTTAIAELM----------------KD---QGKILAVDISREKIQLVEKHAKRLKLSSIEIKIADAE 298 (431)
T ss_pred CCEEEEeCCCccHHHHHHHHHc----------------CC---CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEECchh
Confidence 4689999999999999886433 11 23677888864333333222211 11123334322
Q ss_pred cccccCCCCCceeEEEe---ccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhc
Q 017702 140 SFHSRLFPRSSIHFVHT---SYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELV 216 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S---~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~ 216 (367)
.+- . ++++++|.|++ ++.+..+.+.|.... . .+++ -.++..+....+|..-++-|+
T Consensus 299 ~l~-~-~~~~~fD~Vl~DaPCsg~G~~~~~p~~~~--------------~-~~~~----~~~~l~~~Q~~iL~~a~~~Lk 357 (431)
T PRK14903 299 RLT-E-YVQDTFDRILVDAPCTSLGTARNHPEVLR--------------R-VNKE----DFKKLSEIQLRIVSQAWKLLE 357 (431)
T ss_pred hhh-h-hhhccCCEEEECCCCCCCccccCChHHHH--------------h-CCHH----HHHHHHHHHHHHHHHHHHhcC
Confidence 221 1 23567899987 233344443332111 0 1111 223444566788999999999
Q ss_pred cCceEEEEeec
Q 017702 217 PGGLMVLILAA 227 (367)
Q Consensus 217 pGG~lvl~~~g 227 (367)
|||.||.++..
T Consensus 358 pGG~LvYsTCs 368 (431)
T PRK14903 358 KGGILLYSTCT 368 (431)
T ss_pred CCCEEEEEECC
Confidence 99999999986
|
|
| >PRK09328 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0029 Score=59.97 Aligned_cols=24 Identities=21% Similarity=0.427 Sum_probs=20.3
Q ss_pred hhHHHHHHHHHHhhccCceEEEEe
Q 017702 202 NDMESFLNARAEELVPGGLMVLIL 225 (367)
Q Consensus 202 ~D~~~fL~~Ra~EL~pGG~lvl~~ 225 (367)
.++..|++.-.+-|+|||++++..
T Consensus 215 ~~~~~~~~~~~~~Lk~gG~l~~e~ 238 (275)
T PRK09328 215 DFYRRIIEQAPRYLKPGGWLLLEI 238 (275)
T ss_pred HHHHHHHHHHHHhcccCCEEEEEE
Confidence 456678888889999999999876
|
|
| >PLN03075 nicotianamine synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0058 Score=59.24 Aligned_cols=105 Identities=22% Similarity=0.244 Sum_probs=61.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCc--cchH-HHhhcCC--ccccceeec
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSD--NDFN-TLFKSLP--HARKYFAAG 136 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~--NDFn-~lf~~l~--~~~~~f~~g 136 (367)
.+-+|||+|||.|+.|..++..- . .| .-++.--|.-. +++. .+++..+ ..+--|..+
T Consensus 123 ~p~~VldIGcGpgpltaiilaa~------~---------~p---~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~ 184 (296)
T PLN03075 123 VPTKVAFVGSGPLPLTSIVLAKH------H---------LP---TTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTA 184 (296)
T ss_pred CCCEEEEECCCCcHHHHHHHHHh------c---------CC---CCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEEC
Confidence 56899999999999877765321 0 12 22344445542 2211 1221111 112345555
Q ss_pred cCccccccCCC-CCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhh
Q 017702 137 LPGSFHSRLFP-RSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEEL 215 (367)
Q Consensus 137 vp~SFy~~l~P-~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL 215 (367)
.-.+ +.+ .+.+|++|+. ++|.+++. |=...|+.-++-|
T Consensus 185 Da~~----~~~~l~~FDlVF~~-ALi~~dk~------------------------------------~k~~vL~~l~~~L 223 (296)
T PLN03075 185 DVMD----VTESLKEYDVVFLA-ALVGMDKE------------------------------------EKVKVIEHLGKHM 223 (296)
T ss_pred chhh----cccccCCcCEEEEe-cccccccc------------------------------------cHHHHHHHHHHhc
Confidence 4332 222 3789999999 66554322 1125788889999
Q ss_pred ccCceEEEEe
Q 017702 216 VPGGLMVLIL 225 (367)
Q Consensus 216 ~pGG~lvl~~ 225 (367)
+|||.+++-+
T Consensus 224 kPGG~Lvlr~ 233 (296)
T PLN03075 224 APGALLMLRS 233 (296)
T ss_pred CCCcEEEEec
Confidence 9999999887
|
|
| >PRK10901 16S rRNA methyltransferase B; Provisional | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0065 Score=61.90 Aligned_cols=125 Identities=15% Similarity=0.174 Sum_probs=66.4
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc--cccceeeccCcc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH--ARKYFAAGLPGS 140 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~--~~~~f~~gvp~S 140 (367)
.-+|+|+|||+|.-|+.+.+.. + .-.|+-.|....--..+-+++.. ....+..+....
T Consensus 245 g~~VLDlgaG~G~~t~~la~~~-----------------~---~~~v~a~D~s~~~l~~~~~n~~~~g~~~~~~~~D~~~ 304 (427)
T PRK10901 245 GERVLDACAAPGGKTAHILELA-----------------P---QAQVVALDIDAQRLERVRENLQRLGLKATVIVGDARD 304 (427)
T ss_pred CCEEEEeCCCCChHHHHHHHHc-----------------C---CCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEcCccc
Confidence 4689999999999998776432 0 12466667654322222222211 012234443221
Q ss_pred ccccCCCCCceeEEEecc---ccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 141 FHSRLFPRSSIHFVHTSY---ALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 141 Fy~~l~P~~svd~~~S~~---alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
....++++++|.+++.. ..--+.+-|.. .|. ..++-. ..+......+|..-++-|+|
T Consensus 305 -~~~~~~~~~fD~Vl~D~Pcs~~G~~~~~p~~-------~~~--------~~~~~l----~~l~~~q~~iL~~a~~~Lkp 364 (427)
T PRK10901 305 -PAQWWDGQPFDRILLDAPCSATGVIRRHPDI-------KWL--------RRPEDI----AALAALQSEILDALWPLLKP 364 (427)
T ss_pred -chhhcccCCCCEEEECCCCCcccccccCccc-------ccc--------CCHHHH----HHHHHHHHHHHHHHHHhcCC
Confidence 11224567899999621 11111122221 011 112212 22334556789898999999
Q ss_pred CceEEEEeec
Q 017702 218 GGLMVLILAA 227 (367)
Q Consensus 218 GG~lvl~~~g 227 (367)
||+|+.++..
T Consensus 365 GG~lvystcs 374 (427)
T PRK10901 365 GGTLLYATCS 374 (427)
T ss_pred CCEEEEEeCC
Confidence 9999988864
|
|
| >PF03141 Methyltransf_29: Putative S-adenosyl-L-methionine-dependent methyltransferase; InterPro: IPR004159 Members of this family of hypothetical plant proteins are putative methyltransferases | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0025 Score=65.24 Aligned_cols=23 Identities=17% Similarity=0.174 Sum_probs=19.1
Q ss_pred CCCceEEeeecCCCCcccHHHHH
Q 017702 60 TLKPFKIADLGCSVGPNTLLAVQ 82 (367)
Q Consensus 60 ~~~~~~IaD~GCs~G~nT~~~~~ 82 (367)
.....+++|+|||+|.....+++
T Consensus 115 ~g~iR~~LDvGcG~aSF~a~l~~ 137 (506)
T PF03141_consen 115 GGGIRTALDVGCGVASFGAYLLE 137 (506)
T ss_pred CCceEEEEeccceeehhHHHHhh
Confidence 45678889999999999887763
|
; GO: 0008168 methyltransferase activity |
| >TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0065 Score=61.88 Aligned_cols=126 Identities=15% Similarity=0.130 Sum_probs=69.1
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccc-cceeeccCccc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHAR-KYFAAGLPGSF 141 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~-~~f~~gvp~SF 141 (367)
..+|+|+|||+|.-|..+.+.+ . .-+++-.|...+-...+-+++.... ..-+..+.+.-
T Consensus 239 g~~VLDlcag~G~kt~~la~~~--------~------------~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~ 298 (426)
T TIGR00563 239 EETILDACAAPGGKTTHILELA--------P------------QAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDG 298 (426)
T ss_pred CCeEEEeCCCccHHHHHHHHHc--------C------------CCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecccc
Confidence 4799999999999999886432 0 1157777776544333333332110 11111111211
Q ss_pred cc--cCCCCCceeEEEe---ccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhc
Q 017702 142 HS--RLFPRSSIHFVHT---SYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELV 216 (367)
Q Consensus 142 y~--~l~P~~svd~~~S---~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~ 216 (367)
.+ ...+.+++|.+++ ++++--+.+.|+.. | ..+ ++..+ +..+.-..+|..-++-|+
T Consensus 299 ~~~~~~~~~~~fD~VllDaPcSg~G~~~~~p~~~-------~-------~~~-~~~~~----~l~~lQ~~lL~~a~~~Lk 359 (426)
T TIGR00563 299 RGPSQWAENEQFDRILLDAPCSATGVIRRHPDIK-------W-------LRK-PRDIA----ELAELQSEILDAIWPLLK 359 (426)
T ss_pred ccccccccccccCEEEEcCCCCCCcccccCcchh-------h-------cCC-HHHHH----HHHHHHHHHHHHHHHhcC
Confidence 11 1125678999987 23333344444321 1 111 22222 233345678888889999
Q ss_pred cCceEEEEeec
Q 017702 217 PGGLMVLILAA 227 (367)
Q Consensus 217 pGG~lvl~~~g 227 (367)
|||+||.++..
T Consensus 360 pgG~lvystcs 370 (426)
T TIGR00563 360 TGGTLVYATCS 370 (426)
T ss_pred CCcEEEEEeCC
Confidence 99999999886
|
The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles. |
| >PRK14904 16S rRNA methyltransferase B; Provisional | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0083 Score=61.46 Aligned_cols=125 Identities=14% Similarity=0.127 Sum_probs=69.8
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc---cccceeeccCc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH---ARKYFAAGLPG 139 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~---~~~~f~~gvp~ 139 (367)
.-+|+|+|||+|..|..+.+.+ .+ .-+|+-.|+...-...+-+.+.. .+-.+..+...
T Consensus 251 g~~VLDlgaG~G~kt~~la~~~----------------~~---~~~V~avD~s~~~l~~~~~~~~~~g~~~v~~~~~Da~ 311 (445)
T PRK14904 251 GSTVLDLCAAPGGKSTFMAELM----------------QN---RGQITAVDRYPQKLEKIRSHASALGITIIETIEGDAR 311 (445)
T ss_pred CCEEEEECCCCCHHHHHHHHHh----------------CC---CcEEEEEECCHHHHHHHHHHHHHhCCCeEEEEeCccc
Confidence 3689999999999998776433 11 12678888875443333222221 11224444433
Q ss_pred cccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCC-cccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccC
Q 017702 140 SFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKG-SIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPG 218 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g-~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 218 (367)
. +.|++++|.++. ++|+.-... +.+. .+... .+++..+ +..+....+|..-++-|+||
T Consensus 312 ~----~~~~~~fD~Vl~--------D~Pcsg~g~----~~r~p~~~~~-~~~~~~~----~l~~~q~~iL~~a~~~lkpg 370 (445)
T PRK14904 312 S----FSPEEQPDAILL--------DAPCTGTGV----LGRRAELRWK-LTPEKLA----ELVGLQAELLDHAASLLKPG 370 (445)
T ss_pred c----cccCCCCCEEEE--------cCCCCCcch----hhcCcchhhc-CCHHHHH----HHHHHHHHHHHHHHHhcCCC
Confidence 3 236678999985 333321100 0000 00000 1122222 23345667999999999999
Q ss_pred ceEEEEeec
Q 017702 219 GLMVLILAA 227 (367)
Q Consensus 219 G~lvl~~~g 227 (367)
|+|+.++..
T Consensus 371 G~lvystcs 379 (445)
T PRK14904 371 GVLVYATCS 379 (445)
T ss_pred cEEEEEeCC
Confidence 999999986
|
|
| >PRK14966 unknown domain/N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase fusion protein; Provisional | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0056 Score=62.00 Aligned_cols=23 Identities=17% Similarity=0.472 Sum_probs=18.5
Q ss_pred HHHHHHHHHHhhccCceEEEEee
Q 017702 204 MESFLNARAEELVPGGLMVLILA 226 (367)
Q Consensus 204 ~~~fL~~Ra~EL~pGG~lvl~~~ 226 (367)
++++++.-.+-|+|||.++++..
T Consensus 360 yr~Ii~~a~~~LkpgG~lilEiG 382 (423)
T PRK14966 360 IRTLAQGAPDRLAEGGFLLLEHG 382 (423)
T ss_pred HHHHHHHHHHhcCCCcEEEEEEC
Confidence 45688887889999999987763
|
|
| >KOG2899 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0057 Score=57.29 Aligned_cols=49 Identities=16% Similarity=0.363 Sum_probs=38.2
Q ss_pred CCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEEEEee
Q 017702 147 PRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILA 226 (367)
Q Consensus 147 P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~ 226 (367)
-..-+|+|.|.+-..| ||....+ .-+.+||+.-+.-|.|||+||++=.
T Consensus 163 ~~~~fDiIlcLSiTkW--------------------IHLNwgD------------~GL~~ff~kis~ll~pgGiLvvEPQ 210 (288)
T KOG2899|consen 163 IQPEFDIILCLSITKW--------------------IHLNWGD------------DGLRRFFRKISSLLHPGGILVVEPQ 210 (288)
T ss_pred ccccccEEEEEEeeee--------------------Eeccccc------------HHHHHHHHHHHHhhCcCcEEEEcCC
Confidence 3458999999999999 3333332 3688899999999999999998754
Q ss_pred c
Q 017702 227 A 227 (367)
Q Consensus 227 g 227 (367)
+
T Consensus 211 p 211 (288)
T KOG2899|consen 211 P 211 (288)
T ss_pred c
Confidence 4
|
|
| >PRK01544 bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0033 Score=65.52 Aligned_cols=131 Identities=12% Similarity=0.123 Sum_probs=64.2
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccc-cceeeccCccc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHAR-KYFAAGLPGSF 141 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~-~~f~~gvp~SF 141 (367)
..+|+|+|||+|..++.+.... | ..+++..|....-....-+++.... .--+.-+-+++
T Consensus 139 ~~~VLDlG~GsG~iai~la~~~-----------------p---~~~v~avDis~~al~~A~~N~~~~~l~~~v~~~~~D~ 198 (506)
T PRK01544 139 FLNILELGTGSGCIAISLLCEL-----------------P---NANVIATDISLDAIEVAKSNAIKYEVTDRIQIIHSNW 198 (506)
T ss_pred CCEEEEccCchhHHHHHHHHHC-----------------C---CCeEEEEECCHHHHHHHHHHHHHcCCccceeeeecch
Confidence 4689999999999998776322 2 3467888885321111111110000 00011123344
Q ss_pred cccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceE
Q 017702 142 HSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLM 221 (367)
Q Consensus 142 y~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~l 221 (367)
++. ++.+++|+++|+--....+..+....+. ..|-. .+-.. ..++ ....++.+++.-.+-|+|||.+
T Consensus 199 ~~~-~~~~~fDlIvsNPPYi~~~~~~~l~~~v--~~~EP-~~AL~-gg~d--------Gl~~~~~il~~a~~~L~~gG~l 265 (506)
T PRK01544 199 FEN-IEKQKFDFIVSNPPYISHSEKSEMAIET--INYEP-SIALF-AEED--------GLQAYFIIAENAKQFLKPNGKI 265 (506)
T ss_pred hhh-CcCCCccEEEECCCCCCchhhhhcCchh--hccCc-HHHhc-CCcc--------HHHHHHHHHHHHHHhccCCCEE
Confidence 443 3567899999963333222211100000 00000 00000 0111 1223455888888899999999
Q ss_pred EEEee
Q 017702 222 VLILA 226 (367)
Q Consensus 222 vl~~~ 226 (367)
+++..
T Consensus 266 ~lEig 270 (506)
T PRK01544 266 ILEIG 270 (506)
T ss_pred EEEEC
Confidence 98753
|
|
| >PRK07402 precorrin-6B methylase; Provisional | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.026 Score=51.00 Aligned_cols=25 Identities=28% Similarity=0.414 Sum_probs=20.4
Q ss_pred hHHHHHHHHHHhhccCceEEEEeec
Q 017702 203 DMESFLNARAEELVPGGLMVLILAA 227 (367)
Q Consensus 203 D~~~fL~~Ra~EL~pGG~lvl~~~g 227 (367)
++..+|+.-.+-|+|||+|++....
T Consensus 120 ~~~~~l~~~~~~LkpgG~li~~~~~ 144 (196)
T PRK07402 120 PIKEILQAVWQYLKPGGRLVATASS 144 (196)
T ss_pred CHHHHHHHHHHhcCCCeEEEEEeec
Confidence 4556788888889999999998765
|
|
| >PRK14902 16S rRNA methyltransferase B; Provisional | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.013 Score=59.89 Aligned_cols=125 Identities=16% Similarity=0.130 Sum_probs=66.1
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC---ccccceeeccCc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP---HARKYFAAGLPG 139 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~---~~~~~f~~gvp~ 139 (367)
.-+|+|+|||+|..|+.+.+.. .+ .-+++-.|+-.+--..+-+++. ...-.+..+...
T Consensus 251 g~~VLDlgaG~G~~t~~la~~~----------------~~---~~~v~avDi~~~~l~~~~~n~~~~g~~~v~~~~~D~~ 311 (444)
T PRK14902 251 GDTVLDACAAPGGKTTHIAELL----------------KN---TGKVVALDIHEHKLKLIEENAKRLGLTNIETKALDAR 311 (444)
T ss_pred CCEEEEeCCCCCHHHHHHHHHh----------------CC---CCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCCcc
Confidence 3689999999999999887433 11 1257777775433222222221 111223334322
Q ss_pred cccccCCCCCceeEEEec---cccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhc
Q 017702 140 SFHSRLFPRSSIHFVHTS---YALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELV 216 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~---~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~ 216 (367)
.+- ..++ +++|++++. +....+.+.|... |.+ .++..+ ...+--..+|+.-.+-|+
T Consensus 312 ~~~-~~~~-~~fD~Vl~D~Pcsg~G~~~~~p~~~-------~~~--------~~~~~~----~l~~~q~~iL~~a~~~Lk 370 (444)
T PRK14902 312 KVH-EKFA-EKFDKILVDAPCSGLGVIRRKPDIK-------YNK--------TKEDIE----SLQEIQLEILESVAQYLK 370 (444)
T ss_pred ccc-chhc-ccCCEEEEcCCCCCCeeeccCcchh-------hcC--------CHHHHH----HHHHHHHHHHHHHHHHcC
Confidence 211 1123 789999973 2222233333211 111 111111 222333568888889999
Q ss_pred cCceEEEEeec
Q 017702 217 PGGLMVLILAA 227 (367)
Q Consensus 217 pGG~lvl~~~g 227 (367)
|||+||.++..
T Consensus 371 pGG~lvystcs 381 (444)
T PRK14902 371 KGGILVYSTCT 381 (444)
T ss_pred CCCEEEEEcCC
Confidence 99999977654
|
|
| >COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.011 Score=54.26 Aligned_cols=22 Identities=9% Similarity=0.193 Sum_probs=18.6
Q ss_pred CCceEEeeecCCCCcccHHHHH
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQ 82 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~ 82 (367)
....+|+|+|||+|.+|..+.+
T Consensus 71 ~~g~~VLEIGtGsGY~aAvla~ 92 (209)
T COG2518 71 KPGDRVLEIGTGSGYQAAVLAR 92 (209)
T ss_pred CCCCeEEEECCCchHHHHHHHH
Confidence 3458999999999999988754
|
|
| >COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.02 Score=55.47 Aligned_cols=20 Identities=30% Similarity=0.501 Sum_probs=17.9
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAV 81 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~ 81 (367)
+..+|+|+|||||.+++...
T Consensus 162 ~g~~vlDvGcGSGILaIAa~ 181 (300)
T COG2264 162 KGKTVLDVGCGSGILAIAAA 181 (300)
T ss_pred CCCEEEEecCChhHHHHHHH
Confidence 46899999999999999876
|
|
| >PRK14901 16S rRNA methyltransferase B; Provisional | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.019 Score=58.57 Aligned_cols=130 Identities=14% Similarity=0.073 Sum_probs=67.4
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC---ccccceeeccCc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP---HARKYFAAGLPG 139 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~---~~~~~f~~gvp~ 139 (367)
..+|+|+|||+|..|..+.+.+ .+ .-.|+-.|.-..-...+-+++. -.+-.+..+...
T Consensus 253 g~~VLDl~ag~G~kt~~la~~~----------------~~---~g~v~a~D~~~~rl~~~~~n~~r~g~~~v~~~~~D~~ 313 (434)
T PRK14901 253 GEVILDACAAPGGKTTHIAELM----------------GD---QGEIWAVDRSASRLKKLQENAQRLGLKSIKILAADSR 313 (434)
T ss_pred cCEEEEeCCCCchhHHHHHHHh----------------CC---CceEEEEcCCHHHHHHHHHHHHHcCCCeEEEEeCChh
Confidence 4689999999999999886433 11 1256777775332222222221 111223334322
Q ss_pred cccccC-CCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccC
Q 017702 140 SFHSRL-FPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPG 218 (367)
Q Consensus 140 SFy~~l-~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 218 (367)
.+.... ++++++|.++. ++||.-..... -+.+ +... .+++.. +...+.-..+|..-++-||||
T Consensus 314 ~~~~~~~~~~~~fD~Vl~--------DaPCSg~G~~~--r~p~-~~~~-~~~~~~----~~l~~~Q~~iL~~a~~~lkpg 377 (434)
T PRK14901 314 NLLELKPQWRGYFDRILL--------DAPCSGLGTLH--RHPD-ARWR-QTPEKI----QELAPLQAELLESLAPLLKPG 377 (434)
T ss_pred hcccccccccccCCEEEE--------eCCCCcccccc--cCcc-hhhh-CCHHHH----HHHHHHHHHHHHHHHHhcCCC
Confidence 221111 24578899886 44543211000 0000 0000 112222 223345578899999999999
Q ss_pred ceEEEEeec
Q 017702 219 GLMVLILAA 227 (367)
Q Consensus 219 G~lvl~~~g 227 (367)
|+||.++..
T Consensus 378 G~lvystcs 386 (434)
T PRK14901 378 GTLVYATCT 386 (434)
T ss_pred CEEEEEeCC
Confidence 999988765
|
|
| >KOG3045 consensus Predicted RNA methylase involved in rRNA processing [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0044 Score=58.52 Aligned_cols=25 Identities=24% Similarity=0.542 Sum_probs=21.6
Q ss_pred hHHHHHHHHHHhhccCceEEEEeec
Q 017702 203 DMESFLNARAEELVPGGLMVLILAA 227 (367)
Q Consensus 203 D~~~fL~~Ra~EL~pGG~lvl~~~g 227 (367)
||..|+.--.+-|+|||.+.+.=.-
T Consensus 242 n~~df~kEa~RiLk~gG~l~IAEv~ 266 (325)
T KOG3045|consen 242 NLADFIKEANRILKPGGLLYIAEVK 266 (325)
T ss_pred cHHHHHHHHHHHhccCceEEEEehh
Confidence 7778999999999999999887654
|
|
| >COG2890 HemK Methylase of polypeptide chain release factors [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.0058 Score=58.86 Aligned_cols=124 Identities=15% Similarity=0.201 Sum_probs=66.2
Q ss_pred EEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCcc--ccceeeccCcccc
Q 017702 65 KIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHA--RKYFAAGLPGSFH 142 (367)
Q Consensus 65 ~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~--~~~f~~gvp~SFy 142 (367)
+|+|+|||||..++.+.... | ...|+-.|+...=-..--++.... .+ +..... +.+
T Consensus 113 ~ilDlGTGSG~iai~la~~~-----------------~---~~~V~a~Dis~~Al~~A~~Na~~~~l~~-~~~~~~-dlf 170 (280)
T COG2890 113 RILDLGTGSGAIAIALAKEG-----------------P---DAEVIAVDISPDALALARENAERNGLVR-VLVVQS-DLF 170 (280)
T ss_pred cEEEecCChHHHHHHHHhhC-----------------c---CCeEEEEECCHHHHHHHHHHHHHcCCcc-EEEEee-ecc
Confidence 89999999999999887433 2 346888888631110000011000 11 111121 445
Q ss_pred ccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHH-HHHhhHHHHHHHHHHhhccCceE
Q 017702 143 SRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYST-QYKNDMESFLNARAEELVPGGLM 221 (367)
Q Consensus 143 ~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~-Q~~~D~~~fL~~Ra~EL~pGG~l 221 (367)
..+-. .+|+++| .||-+... .+....+.+. ..|... .+.. -.-...++|+..-..-|+|||.+
T Consensus 171 ~~~~~--~fDlIVs---------NPPYip~~-~~~~~~~~~~---~EP~~A-l~~g~dGl~~~~~i~~~a~~~l~~~g~l 234 (280)
T COG2890 171 EPLRG--KFDLIVS---------NPPYIPAE-DPELLPEVVR---YEPLLA-LVGGGDGLEVYRRILGEAPDILKPGGVL 234 (280)
T ss_pred cccCC--ceeEEEe---------CCCCCCCc-ccccChhhhc---cCHHHH-HccCccHHHHHHHHHHhhHHHcCCCcEE
Confidence 44444 8999999 67766554 1111111000 011000 0000 11224455888888889999999
Q ss_pred EEEee
Q 017702 222 VLILA 226 (367)
Q Consensus 222 vl~~~ 226 (367)
++...
T Consensus 235 ~le~g 239 (280)
T COG2890 235 ILEIG 239 (280)
T ss_pred EEEEC
Confidence 98885
|
|
| >PF02390 Methyltransf_4: Putative methyltransferase ; InterPro: IPR003358 This entry represents tRNA (guanine-N-7) methyltransferase (2 | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.0039 Score=56.83 Aligned_cols=112 Identities=21% Similarity=0.333 Sum_probs=66.9
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC---ccccceeeccCcc
Q 017702 64 FKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP---HARKYFAAGLPGS 140 (367)
Q Consensus 64 ~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~---~~~~~f~~gvp~S 140 (367)
-.++|+|||.|...+.+... .| +..++--|.-.+-.....+.+. ..+-.++.+....
T Consensus 19 ~l~lEIG~G~G~~l~~~A~~-----------------~P---d~n~iGiE~~~~~v~~a~~~~~~~~l~Nv~~~~~da~~ 78 (195)
T PF02390_consen 19 PLILEIGCGKGEFLIELAKR-----------------NP---DINFIGIEIRKKRVAKALRKAEKRGLKNVRFLRGDARE 78 (195)
T ss_dssp EEEEEET-TTSHHHHHHHHH-----------------ST---TSEEEEEES-HHHHHHHHHHHHHHTTSSEEEEES-CTT
T ss_pred CeEEEecCCCCHHHHHHHHH-----------------CC---CCCEEEEecchHHHHHHHHHHHhhcccceEEEEccHHH
Confidence 39999999999988877521 24 4456666665433333322221 1234466667777
Q ss_pred ccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCce
Q 017702 141 FHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGL 220 (367)
Q Consensus 141 Fy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~ 220 (367)
+...++|++|+|-++-++.==|-.+-. .|.++. . ..||..-+.-|+|||.
T Consensus 79 ~l~~~~~~~~v~~i~i~FPDPWpK~rH-----------~krRl~----~---------------~~fl~~~~~~L~~gG~ 128 (195)
T PF02390_consen 79 LLRRLFPPGSVDRIYINFPDPWPKKRH-----------HKRRLV----N---------------PEFLELLARVLKPGGE 128 (195)
T ss_dssp HHHHHSTTTSEEEEEEES-----SGGG-----------GGGSTT----S---------------HHHHHHHHHHEEEEEE
T ss_pred HHhhcccCCchheEEEeCCCCCcccch-----------hhhhcC----C---------------chHHHHHHHHcCCCCE
Confidence 788999999999999988777743221 011111 1 1489999999999998
Q ss_pred EEEEe
Q 017702 221 MVLIL 225 (367)
Q Consensus 221 lvl~~ 225 (367)
+.+.+
T Consensus 129 l~~~T 133 (195)
T PF02390_consen 129 LYFAT 133 (195)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 86655
|
1.1.33 from EC), which catalyses the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. Capping of the pre-mRNA 5' end by addition a monomethylated guanosine cap (m(7)G) is an essential and the earliest modification in the biogenesis of mRNA []. The reaction is catalysed by three enzymes: triphosphatase, guanylyltransferase, and tRNA (guanine-N-7) methyltransferase [, ].; GO: 0008176 tRNA (guanine-N7-)-methyltransferase activity, 0006400 tRNA modification; PDB: 3DXZ_A 3DXY_A 3DXX_A 3CKK_A 3P2I_B 3P2K_D 3P2E_A 3MTE_B 3PB3_B 1YZH_B .... |
| >COG2813 RsmC 16S RNA G1207 methylase RsmC [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.011 Score=57.29 Aligned_cols=102 Identities=20% Similarity=0.314 Sum_probs=60.8
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhc---C--Cccc--cceeec
Q 017702 64 FKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKS---L--PHAR--KYFAAG 136 (367)
Q Consensus 64 ~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~---l--~~~~--~~f~~g 136 (367)
.+|||+|||-|..++.+.+. .| ..++.+.|.- +..+=.. + +... .+|.+-
T Consensus 160 ~~vlDlGCG~Gvlg~~la~~-----------------~p---~~~vtmvDvn---~~Av~~ar~Nl~~N~~~~~~v~~s~ 216 (300)
T COG2813 160 GKVLDLGCGYGVLGLVLAKK-----------------SP---QAKLTLVDVN---ARAVESARKNLAANGVENTEVWASN 216 (300)
T ss_pred CcEEEeCCCccHHHHHHHHh-----------------CC---CCeEEEEecC---HHHHHHHHHhHHHcCCCccEEEEec
Confidence 49999999999999988622 34 5577787763 2322111 1 1111 234443
Q ss_pred cCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhc
Q 017702 137 LPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELV 216 (367)
Q Consensus 137 vp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~ 216 (367)
+ |+.+.. ++|+|+|+=-+| ..+. ....+. .+++..-++-|+
T Consensus 217 ~----~~~v~~--kfd~IisNPPfh---------~G~~-------------v~~~~~-----------~~~i~~A~~~L~ 257 (300)
T COG2813 217 L----YEPVEG--KFDLIISNPPFH---------AGKA-------------VVHSLA-----------QEIIAAAARHLK 257 (300)
T ss_pred c----cccccc--cccEEEeCCCcc---------CCcc-------------hhHHHH-----------HHHHHHHHHhhc
Confidence 3 566555 999999943322 1100 000011 147777788999
Q ss_pred cCceEEEEeec
Q 017702 217 PGGLMVLILAA 227 (367)
Q Consensus 217 pGG~lvl~~~g 227 (367)
+||.|.++.-|
T Consensus 258 ~gGeL~iVan~ 268 (300)
T COG2813 258 PGGELWIVANR 268 (300)
T ss_pred cCCEEEEEEcC
Confidence 99999888765
|
|
| >PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2 | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.013 Score=54.14 Aligned_cols=20 Identities=15% Similarity=0.288 Sum_probs=15.9
Q ss_pred ceEEeeecCCCCcccHHHHH
Q 017702 63 PFKIADLGCSVGPNTLLAVQ 82 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~ 82 (367)
-.+|+|+|||+|.+|.++..
T Consensus 73 g~~VLeIGtGsGY~aAlla~ 92 (209)
T PF01135_consen 73 GDRVLEIGTGSGYQAALLAH 92 (209)
T ss_dssp T-EEEEES-TTSHHHHHHHH
T ss_pred CCEEEEecCCCcHHHHHHHH
Confidence 47999999999999998863
|
1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A .... |
| >TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.024 Score=53.93 Aligned_cols=123 Identities=12% Similarity=0.128 Sum_probs=65.4
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc---cccceeeccCc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH---ARKYFAAGLPG 139 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~---~~~~f~~gvp~ 139 (367)
..+|+|+|||+|..|..+.+.+ . + .-.|+-.|.-..-...+-+++.. .+-.+..+...
T Consensus 72 g~~VLDl~ag~G~kt~~la~~~--------~--------~---~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~D~~ 132 (264)
T TIGR00446 72 PERVLDMAAAPGGKTTQISALM--------K--------N---EGAIVANEFSKSRTKVLIANINRCGVLNVAVTNFDGR 132 (264)
T ss_pred cCEEEEECCCchHHHHHHHHHc--------C--------C---CCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEecCCHH
Confidence 4689999999999999876433 0 0 11466777754333333333211 11112222221
Q ss_pred cccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHH----HHHHHHHHhhHHHHHHHHHHhh
Q 017702 140 SFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVV----RAYSTQYKNDMESFLNARAEEL 215 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~----~~y~~Q~~~D~~~fL~~Ra~EL 215 (367)
.+ . .+.+++|.|+. ++|+.-.. .++ ..|+.. ..-..+..+....+|+.-++-|
T Consensus 133 ~~-~--~~~~~fD~Vl~--------D~Pcsg~G----~~~--------~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~l 189 (264)
T TIGR00446 133 VF-G--AAVPKFDAILL--------DAPCSGEG----VIR--------KDPSRKKNWSEEDIQEISALQKELIDSAFDAL 189 (264)
T ss_pred Hh-h--hhccCCCEEEE--------cCCCCCCc----ccc--------cChhhhhcCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 11 1 12345888876 44543111 000 112221 1112233445567899999999
Q ss_pred ccCceEEEEeec
Q 017702 216 VPGGLMVLILAA 227 (367)
Q Consensus 216 ~pGG~lvl~~~g 227 (367)
+|||+||.++..
T Consensus 190 kpgG~lvYstcs 201 (264)
T TIGR00446 190 KPGGVLVYSTCS 201 (264)
T ss_pred CCCCEEEEEeCC
Confidence 999999988765
|
|
| >KOG1975 consensus mRNA cap methyltransferase [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.0035 Score=60.86 Aligned_cols=112 Identities=21% Similarity=0.312 Sum_probs=68.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc------cccceee
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH------ARKYFAA 135 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~------~~~~f~~ 135 (367)
..-.++|+|||-|.--+-.-..=|+ - -|-+-..|...||...-.+.+.. +...|++
T Consensus 117 ~~~~~~~LgCGKGGDLlKw~kAgI~---------------~---~igiDIAevSI~qa~~RYrdm~~r~~~~~f~a~f~~ 178 (389)
T KOG1975|consen 117 RGDDVLDLGCGKGGDLLKWDKAGIG---------------E---YIGIDIAEVSINQARKRYRDMKNRFKKFIFTAVFIA 178 (389)
T ss_pred cccccceeccCCcccHhHhhhhccc---------------c---eEeeehhhccHHHHHHHHHHHHhhhhcccceeEEEE
Confidence 4467888999999865543211110 0 12223344445666555555432 2345666
Q ss_pred ccCccccccC---C--CCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHH
Q 017702 136 GLPGSFHSRL---F--PRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNA 210 (367)
Q Consensus 136 gvp~SFy~~l---~--P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~ 210 (367)
|+ +|+++| + ++-++|++=|=+|+|+-=.- ..-...+|+.
T Consensus 179 ~D--c~~~~l~d~~e~~dp~fDivScQF~~HYaFet----------------------------------ee~ar~~l~N 222 (389)
T KOG1975|consen 179 AD--CFKERLMDLLEFKDPRFDIVSCQFAFHYAFET----------------------------------EESARIALRN 222 (389)
T ss_pred ec--cchhHHHHhccCCCCCcceeeeeeeEeeeecc----------------------------------HHHHHHHHHH
Confidence 65 677543 2 33449999999999982110 0122358999
Q ss_pred HHHhhccCceEEEEeec
Q 017702 211 RAEELVPGGLMVLILAA 227 (367)
Q Consensus 211 Ra~EL~pGG~lvl~~~g 227 (367)
-++-|+|||.|+-+++.
T Consensus 223 va~~LkpGG~FIgTiPd 239 (389)
T KOG1975|consen 223 VAKCLKPGGVFIGTIPD 239 (389)
T ss_pred HHhhcCCCcEEEEecCc
Confidence 99999999999998874
|
|
| >KOG2904 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.072 Score=50.94 Aligned_cols=119 Identities=19% Similarity=0.209 Sum_probs=69.4
Q ss_pred ceEEeeecCCCCcccHHHHHH--------------HHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc
Q 017702 63 PFKIADLGCSVGPNTLLAVQN--------------IIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH 128 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~--------------ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~ 128 (367)
.-.|+|+|||+|.-|+.++.. .|.-..+.+..... .- -|.|.++|+.+--
T Consensus 149 ~~~ildlgtGSGaIslsll~~L~~~~v~AiD~S~~Ai~La~eN~qr~~l---~g---~i~v~~~~me~d~---------- 212 (328)
T KOG2904|consen 149 HTHILDLGTGSGAISLSLLHGLPQCTVTAIDVSKAAIKLAKENAQRLKL---SG---RIEVIHNIMESDA---------- 212 (328)
T ss_pred cceEEEecCCccHHHHHHHhcCCCceEEEEeccHHHHHHHHHHHHHHhh---cC---ceEEEeccccccc----------
Confidence 347999999999999998863 22222333332211 11 3567777665422
Q ss_pred cccceeeccCccccccC-CCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHH--------
Q 017702 129 ARKYFAAGLPGSFHSRL-FPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQ-------- 199 (367)
Q Consensus 129 ~~~~f~~gvp~SFy~~l-~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q-------- 199 (367)
|... .+.+.+|+++| .|+-+.+.+-+. ..|+|+ .|..-
T Consensus 213 -------------~~~~~l~~~~~dllvs---------NPPYI~~dD~~~----------l~~eV~-~yEp~lALdGg~e 259 (328)
T KOG2904|consen 213 -------------SDEHPLLEGKIDLLVS---------NPPYIRKDDNRQ----------LKPEVR-LYEPKLALDGGLE 259 (328)
T ss_pred -------------ccccccccCceeEEec---------CCCcccccchhh----------cCchhe-ecCchhhhccccc
Confidence 2222 56788999999 566654432111 111111 00000
Q ss_pred HHhhHHHHHHHHHHhhccCceEEEEeecccCC
Q 017702 200 YKNDMESFLNARAEELVPGGLMVLILAAVVPD 231 (367)
Q Consensus 200 ~~~D~~~fL~~Ra~EL~pGG~lvl~~~g~~~n 231 (367)
.-.-+..|+..-.+-|+|||.+.++..+ ++.
T Consensus 260 G~~~~~~~~~~a~R~Lq~gg~~~le~~~-~~~ 290 (328)
T KOG2904|consen 260 GYDNLVHYWLLATRMLQPGGFEQLELVE-RKE 290 (328)
T ss_pred hhHHHHHHHHhhHhhcccCCeEEEEecc-ccc
Confidence 1123446788888999999999999998 654
|
|
| >KOG4300 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.019 Score=52.74 Aligned_cols=103 Identities=20% Similarity=0.246 Sum_probs=62.3
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhc-C----Cccccceeecc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKS-L----PHARKYFAAGL 137 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~-l----~~~~~~f~~gv 137 (367)
-.-++++|||||+|=--. +. .| --.|.+-|=-. .|...... . |..-.+|+.|.
T Consensus 77 K~~vLEvgcGtG~Nfkfy-------------~~-----~p---~~svt~lDpn~-~mee~~~ks~~E~k~~~~~~fvva~ 134 (252)
T KOG4300|consen 77 KGDVLEVGCGTGANFKFY-------------PW-----KP---INSVTCLDPNE-KMEEIADKSAAEKKPLQVERFVVAD 134 (252)
T ss_pred ccceEEecccCCCCcccc-------------cC-----CC---CceEEEeCCcH-HHHHHHHHHHhhccCcceEEEEeec
Confidence 466899999999994321 11 23 23566666432 22322211 1 11224578887
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
+.+.-+ +++.|+|.+++..+|.=. +|-.+-|+.-.+-|+|
T Consensus 135 ge~l~~--l~d~s~DtVV~TlvLCSv--------------------------------------e~~~k~L~e~~rlLRp 174 (252)
T KOG4300|consen 135 GENLPQ--LADGSYDTVVCTLVLCSV--------------------------------------EDPVKQLNEVRRLLRP 174 (252)
T ss_pred hhcCcc--cccCCeeeEEEEEEEecc--------------------------------------CCHHHHHHHHHHhcCC
Confidence 444221 289999999997766321 1333467777788899
Q ss_pred CceEEEEeec
Q 017702 218 GGLMVLILAA 227 (367)
Q Consensus 218 GG~lvl~~~g 227 (367)
||++++.=-+
T Consensus 175 gG~iifiEHv 184 (252)
T KOG4300|consen 175 GGRIIFIEHV 184 (252)
T ss_pred CcEEEEEecc
Confidence 9999888766
|
|
| >PRK04457 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.011 Score=56.37 Aligned_cols=110 Identities=14% Similarity=0.189 Sum_probs=62.2
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhc---CC-c-cccceee
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKS---LP-H-ARKYFAA 135 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~---l~-~-~~~~f~~ 135 (367)
+.+-+|+|+|||+|..+..+.... | ..+++.-|+-.. .-.+.+. ++ . .+--+..
T Consensus 65 ~~~~~vL~IG~G~G~l~~~l~~~~-----------------p---~~~v~~VEidp~-vi~~A~~~f~~~~~~~rv~v~~ 123 (262)
T PRK04457 65 PRPQHILQIGLGGGSLAKFIYTYL-----------------P---DTRQTAVEINPQ-VIAVARNHFELPENGERFEVIE 123 (262)
T ss_pred CCCCEEEEECCCHhHHHHHHHHhC-----------------C---CCeEEEEECCHH-HHHHHHHHcCCCCCCCceEEEE
Confidence 345789999999999887665221 2 234555555211 1111111 11 1 1223455
Q ss_pred ccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhh
Q 017702 136 GLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEEL 215 (367)
Q Consensus 136 gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL 215 (367)
|....|..+. ++++|+|+... ++-- ..|..+. ...|++...+-|
T Consensus 124 ~Da~~~l~~~--~~~yD~I~~D~-~~~~-~~~~~l~--------------------------------t~efl~~~~~~L 167 (262)
T PRK04457 124 ADGAEYIAVH--RHSTDVILVDG-FDGE-GIIDALC--------------------------------TQPFFDDCRNAL 167 (262)
T ss_pred CCHHHHHHhC--CCCCCEEEEeC-CCCC-CCccccC--------------------------------cHHHHHHHHHhc
Confidence 6655555433 35789998742 2211 1121110 125888889999
Q ss_pred ccCceEEEEeec
Q 017702 216 VPGGLMVLILAA 227 (367)
Q Consensus 216 ~pGG~lvl~~~g 227 (367)
+|||+++++..+
T Consensus 168 ~pgGvlvin~~~ 179 (262)
T PRK04457 168 SSDGIFVVNLWS 179 (262)
T ss_pred CCCcEEEEEcCC
Confidence 999999998876
|
|
| >TIGR00417 speE spermidine synthase | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.007 Score=57.80 Aligned_cols=108 Identities=14% Similarity=0.104 Sum_probs=59.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC-------cccccee
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP-------HARKYFA 134 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~-------~~~~~f~ 134 (367)
++.+|+|+|||+|..+..+++.. .. + ++...|+..+-....-+.++ ..+--+.
T Consensus 72 ~p~~VL~iG~G~G~~~~~ll~~~----------------~~---~-~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~ 131 (270)
T TIGR00417 72 NPKHVLVIGGGDGGVLREVLKHK----------------SV---E-KATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQ 131 (270)
T ss_pred CCCEEEEEcCCchHHHHHHHhCC----------------Cc---c-eEEEEeCCHHHHHHHHHHhHhhcccccCCceEEE
Confidence 45599999999999776554211 01 1 45555654322111111111 1111234
Q ss_pred eccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHh
Q 017702 135 AGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEE 214 (367)
Q Consensus 135 ~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~E 214 (367)
.+.+..|..+. ++++|+|++..+-++-. +. .-| ...|++..++-
T Consensus 132 ~~D~~~~l~~~--~~~yDvIi~D~~~~~~~--~~-------------------------~l~-------~~ef~~~~~~~ 175 (270)
T TIGR00417 132 IDDGFKFLADT--ENTFDVIIVDSTDPVGP--AE-------------------------TLF-------TKEFYELLKKA 175 (270)
T ss_pred ECchHHHHHhC--CCCccEEEEeCCCCCCc--cc-------------------------chh-------HHHHHHHHHHH
Confidence 45555555443 57899999865433310 00 001 12578888899
Q ss_pred hccCceEEEEe
Q 017702 215 LVPGGLMVLIL 225 (367)
Q Consensus 215 L~pGG~lvl~~ 225 (367)
|+|||++++..
T Consensus 176 L~pgG~lv~~~ 186 (270)
T TIGR00417 176 LNEDGIFVAQS 186 (270)
T ss_pred hCCCcEEEEcC
Confidence 99999999873
|
the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM. |
| >PRK03612 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.018 Score=60.30 Aligned_cols=131 Identities=18% Similarity=0.155 Sum_probs=70.2
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhc-----------CCcc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKS-----------LPHA 129 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~-----------l~~~ 129 (367)
+++-+|+|+|||+|..+..+++. .+ .-++..-|+-..= -.+.+. +...
T Consensus 296 ~~~~rVL~IG~G~G~~~~~ll~~-----------------~~---v~~v~~VEid~~v-i~~ar~~~~l~~~~~~~~~dp 354 (521)
T PRK03612 296 ARPRRVLVLGGGDGLALREVLKY-----------------PD---VEQVTLVDLDPAM-TELARTSPALRALNGGALDDP 354 (521)
T ss_pred CCCCeEEEEcCCccHHHHHHHhC-----------------CC---cCeEEEEECCHHH-HHHHHhCCcchhhhccccCCC
Confidence 35679999999999877665521 01 0145555553211 111111 1112
Q ss_pred ccceeeccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHH
Q 017702 130 RKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLN 209 (367)
Q Consensus 130 ~~~f~~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~ 209 (367)
+--+..++...|... .++++|+|++...-.|- |. ..+-|. ..|++
T Consensus 355 rv~vi~~Da~~~l~~--~~~~fDvIi~D~~~~~~---~~-----------------------~~~L~t-------~ef~~ 399 (521)
T PRK03612 355 RVTVVNDDAFNWLRK--LAEKFDVIIVDLPDPSN---PA-----------------------LGKLYS-------VEFYR 399 (521)
T ss_pred ceEEEEChHHHHHHh--CCCCCCEEEEeCCCCCC---cc-----------------------hhccch-------HHHHH
Confidence 223556665555443 24689999997433331 10 000111 24777
Q ss_pred HHHHhhccCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCC
Q 017702 210 ARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGV 259 (367)
Q Consensus 210 ~Ra~EL~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~ 259 (367)
.-.+-|+|||++++.... +... -+.+.++.+.|.+.|.
T Consensus 400 ~~~~~L~pgG~lv~~~~~--~~~~----------~~~~~~i~~~l~~~gf 437 (521)
T PRK03612 400 LLKRRLAPDGLLVVQSTS--PYFA----------PKAFWSIEATLEAAGL 437 (521)
T ss_pred HHHHhcCCCeEEEEecCC--cccc----------hHHHHHHHHHHHHcCC
Confidence 777889999999887643 2211 1344556666666665
|
|
| >TIGR01177 conserved hypothetical protein TIGR01177 | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.026 Score=55.46 Aligned_cols=24 Identities=25% Similarity=0.260 Sum_probs=20.3
Q ss_pred HHHHHHHHHHhhccCceEEEEeec
Q 017702 204 MESFLNARAEELVPGGLMVLILAA 227 (367)
Q Consensus 204 ~~~fL~~Ra~EL~pGG~lvl~~~g 227 (367)
...+|+.-++-|+|||++++.++.
T Consensus 273 ~~~~l~~~~r~Lk~gG~lv~~~~~ 296 (329)
T TIGR01177 273 YERSLEEFHEVLKSEGWIVYAVPT 296 (329)
T ss_pred HHHHHHHHHHHccCCcEEEEEEcC
Confidence 356888888999999999998876
|
This family is found exclusively in the Archaea. |
| >PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.025 Score=55.61 Aligned_cols=20 Identities=15% Similarity=0.391 Sum_probs=17.5
Q ss_pred ceEEeeecCCCCcccHHHHH
Q 017702 63 PFKIADLGCSVGPNTLLAVQ 82 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~ 82 (367)
..+|+|+|||+|.+|..+.+
T Consensus 81 g~~VLDIG~GtG~~a~~LA~ 100 (322)
T PRK13943 81 GMRVLEIGGGTGYNAAVMSR 100 (322)
T ss_pred CCEEEEEeCCccHHHHHHHH
Confidence 46999999999999998864
|
|
| >PRK01581 speE spermidine synthase; Validated | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.012 Score=58.62 Aligned_cols=110 Identities=17% Similarity=0.200 Sum_probs=60.3
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhc---CC--------cc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKS---LP--------HA 129 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~---l~--------~~ 129 (367)
+++.+|+++|||+|.....+++ . .+ .-+|..-|+-.. --.+.+. ++ ..
T Consensus 149 ~~PkrVLIIGgGdG~tlrelLk-----------~------~~---v~~It~VEIDpe-VIelAr~~~~L~~~~~~~~~Dp 207 (374)
T PRK01581 149 IDPKRVLILGGGDGLALREVLK-----------Y------ET---VLHVDLVDLDGS-MINMARNVPELVSLNKSAFFDN 207 (374)
T ss_pred CCCCEEEEECCCHHHHHHHHHh-----------c------CC---CCeEEEEeCCHH-HHHHHHhccccchhccccCCCC
Confidence 4567999999999985443431 0 11 125666666532 1222222 11 11
Q ss_pred ccceeeccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHH
Q 017702 130 RKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLN 209 (367)
Q Consensus 130 ~~~f~~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~ 209 (367)
+--+..+++..|... .++++|+|++-. |.+.... ...-|. ..|++
T Consensus 208 RV~vvi~Da~~fL~~--~~~~YDVIIvDl--------~DP~~~~------------------~~~LyT-------~EFy~ 252 (374)
T PRK01581 208 RVNVHVCDAKEFLSS--PSSLYDVIIIDF--------PDPATEL------------------LSTLYT-------SELFA 252 (374)
T ss_pred ceEEEECcHHHHHHh--cCCCccEEEEcC--------CCccccc------------------hhhhhH-------HHHHH
Confidence 223455665555543 346799999852 2211100 011121 25788
Q ss_pred HHHHhhccCceEEEEee
Q 017702 210 ARAEELVPGGLMVLILA 226 (367)
Q Consensus 210 ~Ra~EL~pGG~lvl~~~ 226 (367)
...+-|+|||.|++...
T Consensus 253 ~~~~~LkPgGV~V~Qs~ 269 (374)
T PRK01581 253 RIATFLTEDGAFVCQSN 269 (374)
T ss_pred HHHHhcCCCcEEEEecC
Confidence 88899999999887643
|
|
| >smart00650 rADc Ribosomal RNA adenine dimethylases | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.023 Score=50.10 Aligned_cols=20 Identities=15% Similarity=0.114 Sum_probs=17.6
Q ss_pred ceEEeeecCCCCcccHHHHH
Q 017702 63 PFKIADLGCSVGPNTLLAVQ 82 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~ 82 (367)
.-+|+|+|||+|..|..+++
T Consensus 14 ~~~vLEiG~G~G~lt~~l~~ 33 (169)
T smart00650 14 GDTVLEIGPGKGALTEELLE 33 (169)
T ss_pred cCEEEEECCCccHHHHHHHh
Confidence 45899999999999998874
|
|
| >PF05185 PRMT5: PRMT5 arginine-N-methyltransferase; InterPro: IPR007857 The human homologue of Saccharomyces cerevisiae Skb1 (Shk1 kinase-binding protein 1) is a protein methyltransferase [] | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.029 Score=57.61 Aligned_cols=23 Identities=30% Similarity=0.450 Sum_probs=17.5
Q ss_pred CceEEeeecCCCCcccHHHHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNI 84 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~i 84 (367)
+..+|+|+|||+|+++...++..
T Consensus 186 ~~~vVldVGAGrGpL~~~al~A~ 208 (448)
T PF05185_consen 186 KDKVVLDVGAGRGPLSMFALQAG 208 (448)
T ss_dssp TT-EEEEES-TTSHHHHHHHHTT
T ss_pred cceEEEEeCCCccHHHHHHHHHH
Confidence 35899999999999998887543
|
These proteins seem to play a role in Jak signalling.; GO: 0008168 methyltransferase activity, 0005737 cytoplasm; PDB: 2Y1W_C 2Y1X_D 2V7E_B 2V74_H 3R0Q_G 3B3F_B 3B3J_A 3B3G_A 3UA3_A 3UA4_B .... |
| >PLN02672 methionine S-methyltransferase | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.019 Score=64.46 Aligned_cols=23 Identities=13% Similarity=0.316 Sum_probs=20.0
Q ss_pred HHHHHHHHHhhccCceEEEEeec
Q 017702 205 ESFLNARAEELVPGGLMVLILAA 227 (367)
Q Consensus 205 ~~fL~~Ra~EL~pGG~lvl~~~g 227 (367)
++++..-.+-|+|||.|++++..
T Consensus 258 r~i~~~a~~~L~pgG~l~lEiG~ 280 (1082)
T PLN02672 258 ARAVEEGISVIKPMGIMIFNMGG 280 (1082)
T ss_pred HHHHHHHHHhccCCCEEEEEECc
Confidence 45888888899999999999986
|
|
| >PRK13256 thiopurine S-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.26 Score=46.05 Aligned_cols=138 Identities=12% Similarity=0.067 Sum_probs=80.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc-------------
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH------------- 128 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~------------- 128 (367)
+..||++.|||.|.+...+.+ . -.+|+-.|+...=-...|+....
T Consensus 43 ~~~rvLvPgCGkg~D~~~LA~------------~----------G~~V~GvDlS~~Ai~~~~~e~~~~~~~~~~~~~~~~ 100 (226)
T PRK13256 43 DSSVCLIPMCGCSIDMLFFLS------------K----------GVKVIGIELSEKAVLSFFSQNTINYEVIHGNDYKLY 100 (226)
T ss_pred CCCeEEEeCCCChHHHHHHHh------------C----------CCcEEEEecCHHHHHHHHHHcCCCcceeccccccee
Confidence 347999999999999998873 1 12456666654333333442210
Q ss_pred --cccceeeccCccccccCCC---CCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhh
Q 017702 129 --ARKYFAAGLPGSFHSRLFP---RSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKND 203 (367)
Q Consensus 129 --~~~~f~~gvp~SFy~~l~P---~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D 203 (367)
..-.+.. |.|++--.+ -+.+|+|+=.++|+=| | |+....|
T Consensus 101 ~~~~i~~~~---gD~f~l~~~~~~~~~fD~VyDra~~~Al---p----------------------p~~R~~Y------- 145 (226)
T PRK13256 101 KGDDIEIYV---ADIFNLPKIANNLPVFDIWYDRGAYIAL---P----------------------NDLRTNY------- 145 (226)
T ss_pred ccCceEEEE---ccCcCCCccccccCCcCeeeeehhHhcC---C----------------------HHHHHHH-------
Confidence 0011222 224431111 1456777766666653 2 3344444
Q ss_pred HHHHHHHHHHhhccCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHH
Q 017702 204 MESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAI 283 (367)
Q Consensus 204 ~~~fL~~Ra~EL~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~ 283 (367)
.++-++-|+|||.+++.++- .+.. ..-|-+.-+.+|++++
T Consensus 146 ----~~~l~~lL~pgg~llll~~~-~~~~-----------------------------------~~GPPf~v~~~e~~~l 185 (226)
T PRK13256 146 ----AKMMLEVCSNNTQILLLVME-HDKK-----------------------------------SQTPPYSVTQAELIKN 185 (226)
T ss_pred ----HHHHHHHhCCCcEEEEEEEe-cCCC-----------------------------------CCCCCCcCCHHHHHHh
Confidence 45556778999999999985 3211 0224455678999999
Q ss_pred HHhCCceEEeEEEEE
Q 017702 284 IRTNGNFTIEKMEKL 298 (367)
Q Consensus 284 l~~~g~F~I~~lE~~ 298 (367)
+.+. |+|+.++..
T Consensus 186 f~~~--~~i~~l~~~ 198 (226)
T PRK13256 186 FSAK--IKFELIDSK 198 (226)
T ss_pred ccCC--ceEEEeeec
Confidence 8763 888887753
|
|
| >PF12147 Methyltransf_20: Putative methyltransferase; InterPro: IPR022744 This C-terminal region is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.57 Score=45.36 Aligned_cols=60 Identities=17% Similarity=0.259 Sum_probs=40.2
Q ss_pred HHHHHHHhhccCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCccc--CCHHHHHHHH
Q 017702 207 FLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYN--ATPKELEAII 284 (367)
Q Consensus 207 fL~~Ra~EL~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~--~s~eE~~~~l 284 (367)
-|+--+..+.|||.||.+.-- -. | -.+.|..+|.... + .-||.. ||..|..+++
T Consensus 231 sl~gl~~al~pgG~lIyTgQP---wH-P--------Qle~IAr~LtsHr-~-----------g~~WvMRrRsq~EmD~Lv 286 (311)
T PF12147_consen 231 SLAGLARALEPGGYLIYTGQP---WH-P--------QLEMIARVLTSHR-D-----------GKAWVMRRRSQAEMDQLV 286 (311)
T ss_pred HHHHHHHHhCCCcEEEEcCCC---CC-c--------chHHHHHHHhccc-C-----------CCceEEEecCHHHHHHHH
Confidence 467778889999999887632 11 1 1256666665421 1 134554 7999999999
Q ss_pred HhCCceE
Q 017702 285 RTNGNFT 291 (367)
Q Consensus 285 ~~~g~F~ 291 (367)
+.+| |+
T Consensus 287 ~~aG-F~ 292 (311)
T PF12147_consen 287 EAAG-FE 292 (311)
T ss_pred HHcC-Cc
Confidence 9997 64
|
It is found in association with PF00561 from PFAM. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. This domain belongs to the S-adenosyl-L-methionine-dependent methyltransferases superfamily. |
| >PF10294 Methyltransf_16: Putative methyltransferase; InterPro: IPR019410 There are a number of unidentified genes that have a high probability of coding for methyltransferases | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.02 Score=51.07 Aligned_cols=110 Identities=16% Similarity=0.198 Sum_probs=55.5
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc-----cccce--
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH-----ARKYF-- 133 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~-----~~~~f-- 133 (367)
....+|+|+|||+|-.++.+.... .+ . +|+++|++. =...+=.++.. ..++-
T Consensus 44 ~~~~~VLELGaG~Gl~gi~~a~~~----------------~~---~-~Vv~TD~~~-~l~~l~~Ni~~N~~~~~~~v~v~ 102 (173)
T PF10294_consen 44 FRGKRVLELGAGTGLPGIAAAKLF----------------GA---A-RVVLTDYNE-VLELLRRNIELNGSLLDGRVSVR 102 (173)
T ss_dssp TTTSEEEETT-TTSHHHHHHHHT-----------------T----S-EEEEEE-S--HHHHHHHHHHTT--------EEE
T ss_pred cCCceEEEECCccchhHHHHHhcc----------------CC---c-eEEEeccch-hhHHHHHHHHhccccccccccCc
Confidence 345899999999999888776331 11 2 689999875 21112222211 11111
Q ss_pred eeccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHH
Q 017702 134 AAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAE 213 (367)
Q Consensus 134 ~~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~ 213 (367)
..-.+.......+.+.++|+|+.+=++.+= +.+..+++.-..
T Consensus 103 ~L~Wg~~~~~~~~~~~~~D~IlasDv~Y~~--------------------------------------~~~~~L~~tl~~ 144 (173)
T PF10294_consen 103 PLDWGDELDSDLLEPHSFDVILASDVLYDE--------------------------------------ELFEPLVRTLKR 144 (173)
T ss_dssp E--TTS-HHHHHHS-SSBSEEEEES--S-G--------------------------------------GGHHHHHHHHHH
T ss_pred EEEecCcccccccccccCCEEEEecccchH--------------------------------------HHHHHHHHHHHH
Confidence 111111222333455678888776655541 234457778888
Q ss_pred hhccCceEEEEeecccC
Q 017702 214 ELVPGGLMVLILAAVVP 230 (367)
Q Consensus 214 EL~pGG~lvl~~~g~~~ 230 (367)
-|+|+|.+++...- |.
T Consensus 145 ll~~~~~vl~~~~~-R~ 160 (173)
T PF10294_consen 145 LLKPNGKVLLAYKR-RR 160 (173)
T ss_dssp HBTT-TTEEEEEE--S-
T ss_pred HhCCCCEEEEEeCE-ec
Confidence 99999996666655 53
|
They make up approximately 0.6-1.6% of the genes in the yeast, human, mouse, Drosophila melanogaster, Caenorhabditis elegans, Arabidopsis thaliana, and Escherichia coli genomes []. This entry represents putative nicotinamide N-methyltransferases involved in rDNA silencing and in lifespan determination. ; PDB: 3BZB_A. |
| >PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.045 Score=53.13 Aligned_cols=18 Identities=28% Similarity=0.575 Sum_probs=15.4
Q ss_pred eEEeeecCCCCcccHHHH
Q 017702 64 FKIADLGCSVGPNTLLAV 81 (367)
Q Consensus 64 ~~IaD~GCs~G~nT~~~~ 81 (367)
-+|+|+|||||.+++...
T Consensus 163 ~~vLDvG~GSGILaiaA~ 180 (295)
T PF06325_consen 163 KRVLDVGCGSGILAIAAA 180 (295)
T ss_dssp SEEEEES-TTSHHHHHHH
T ss_pred CEEEEeCCcHHHHHHHHH
Confidence 599999999999999776
|
Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A .... |
| >KOG1499 consensus Protein arginine N-methyltransferase PRMT1 and related enzymes [Posttranslational modification, protein turnover, chaperones; Transcription; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.043 Score=54.00 Aligned_cols=46 Identities=24% Similarity=0.397 Sum_probs=34.5
Q ss_pred cccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceE
Q 017702 142 HSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLM 221 (367)
Q Consensus 142 y~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~l 221 (367)
.+-.+|...+|+++|=|-=.||- ++.=+...|-+|-+=|+|||.+
T Consensus 119 Edi~LP~eKVDiIvSEWMGy~Ll-----------------------------------~EsMldsVl~ARdkwL~~~G~i 163 (346)
T KOG1499|consen 119 EDIELPVEKVDIIVSEWMGYFLL-----------------------------------YESMLDSVLYARDKWLKEGGLI 163 (346)
T ss_pred EEEecCccceeEEeehhhhHHHH-----------------------------------HhhhhhhhhhhhhhccCCCceE
Confidence 44456778999999976666654 2234556899999999999987
Q ss_pred E
Q 017702 222 V 222 (367)
Q Consensus 222 v 222 (367)
+
T Consensus 164 ~ 164 (346)
T KOG1499|consen 164 Y 164 (346)
T ss_pred c
Confidence 4
|
|
| >PLN02366 spermidine synthase | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.053 Score=53.00 Aligned_cols=110 Identities=16% Similarity=0.201 Sum_probs=63.4
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCcc--chHH-Hhhc----CCccccce
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDN--DFNT-LFKS----LPHARKYF 133 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~N--DFn~-lf~~----l~~~~~~f 133 (367)
+++-+|+++|||.|.....+++. ++ .-+|..-|+... ++.. .|.. +...+--+
T Consensus 90 ~~pkrVLiIGgG~G~~~rellk~-----------------~~---v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~v 149 (308)
T PLN02366 90 PNPKKVLVVGGGDGGVLREIARH-----------------SS---VEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNL 149 (308)
T ss_pred CCCCeEEEEcCCccHHHHHHHhC-----------------CC---CCeEEEEECCHHHHHHHHHhhhhhccccCCCceEE
Confidence 45689999999999966555311 11 114555565531 1111 1211 11223446
Q ss_pred eeccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHH
Q 017702 134 AAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAE 213 (367)
Q Consensus 134 ~~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~ 213 (367)
..+++..|.+.. |++++|+|++-.+-+|. |. ..-|. ..|++...+
T Consensus 150 i~~Da~~~l~~~-~~~~yDvIi~D~~dp~~---~~------------------------~~L~t-------~ef~~~~~~ 194 (308)
T PLN02366 150 HIGDGVEFLKNA-PEGTYDAIIVDSSDPVG---PA------------------------QELFE-------KPFFESVAR 194 (308)
T ss_pred EEChHHHHHhhc-cCCCCCEEEEcCCCCCC---ch------------------------hhhhH-------HHHHHHHHH
Confidence 677777776644 56789999985444331 10 00111 258888889
Q ss_pred hhccCceEEEEe
Q 017702 214 ELVPGGLMVLIL 225 (367)
Q Consensus 214 EL~pGG~lvl~~ 225 (367)
-|+|||.|+...
T Consensus 195 ~L~pgGvlv~q~ 206 (308)
T PLN02366 195 ALRPGGVVCTQA 206 (308)
T ss_pred hcCCCcEEEECc
Confidence 999999987653
|
|
| >COG4976 Predicted methyltransferase (contains TPR repeat) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.067 Score=49.94 Aligned_cols=66 Identities=24% Similarity=0.478 Sum_probs=42.2
Q ss_pred hHHHHHHHHHHhhccCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHH
Q 017702 203 DMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEA 282 (367)
Q Consensus 203 D~~~fL~~Ra~EL~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~ 282 (367)
++..++-.-+.-|+|||.|.++.=. -++.. +. - +.. .-=|..+..=+++
T Consensus 203 ~Le~~~~~aa~~L~~gGlfaFSvE~-l~~~~-------~f--~-l~p--------------------s~RyAH~~~YVr~ 251 (287)
T COG4976 203 ALEGLFAGAAGLLAPGGLFAFSVET-LPDDG-------GF--V-LGP--------------------SQRYAHSESYVRA 251 (287)
T ss_pred chhhHHHHHHHhcCCCceEEEEecc-cCCCC-------Ce--e-cch--------------------hhhhccchHHHHH
Confidence 4556888899999999999888743 22210 00 0 000 0113456667788
Q ss_pred HHHhCCceEEeEEEEEec
Q 017702 283 IIRTNGNFTIEKMEKLSQ 300 (367)
Q Consensus 283 ~l~~~g~F~I~~lE~~~~ 300 (367)
.++..| |++..++....
T Consensus 252 ~l~~~G-l~~i~~~~tti 268 (287)
T COG4976 252 LLAASG-LEVIAIEDTTI 268 (287)
T ss_pred HHHhcC-ceEEEeecccc
Confidence 888887 99988887643
|
|
| >COG0220 Predicted S-adenosylmethionine-dependent methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.13 Score=48.08 Aligned_cols=62 Identities=23% Similarity=0.357 Sum_probs=42.2
Q ss_pred eeccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHH
Q 017702 134 AAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAE 213 (367)
Q Consensus 134 ~~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~ 213 (367)
+.+..--+...++|++|+|=++-++.==|-.+-. +|.++.. ..||+.-++
T Consensus 103 ~~~DA~~~l~~~~~~~sl~~I~i~FPDPWpKkRH-----------~KRRl~~-------------------~~fl~~~a~ 152 (227)
T COG0220 103 LCGDAVEVLDYLIPDGSLDKIYINFPDPWPKKRH-----------HKRRLTQ-------------------PEFLKLYAR 152 (227)
T ss_pred EcCCHHHHHHhcCCCCCeeEEEEECCCCCCCccc-----------cccccCC-------------------HHHHHHHHH
Confidence 3344444567777888999999988877833322 1222221 148999999
Q ss_pred hhccCceEEEEe
Q 017702 214 ELVPGGLMVLIL 225 (367)
Q Consensus 214 EL~pGG~lvl~~ 225 (367)
-|+|||.+.+.+
T Consensus 153 ~Lk~gG~l~~aT 164 (227)
T COG0220 153 KLKPGGVLHFAT 164 (227)
T ss_pred HccCCCEEEEEe
Confidence 999999987766
|
|
| >PRK01544 bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=95.15 E-value=0.063 Score=56.01 Aligned_cols=139 Identities=14% Similarity=0.138 Sum_probs=79.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCccee
Q 017702 28 STYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEF 107 (367)
Q Consensus 28 S~~Q~~~~~~~~~ll~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~ 107 (367)
...|++.++...|.+.=..++ .+ ..+.-.++|+|||.|..++.+... .| +.
T Consensus 322 ~~~q~~~~e~~~p~~~i~~ek-----lf----~~~~p~~lEIG~G~G~~~~~~A~~-----------------~p---~~ 372 (506)
T PRK01544 322 SGVQQNLLDNELPKYLFSKEK-----LV----NEKRKVFLEIGFGMGEHFINQAKM-----------------NP---DA 372 (506)
T ss_pred CHHHHHHHHhhhhhhCCCHHH-----hC----CCCCceEEEECCCchHHHHHHHHh-----------------CC---CC
Confidence 347888888888876421111 11 245688999999999998877631 12 22
Q ss_pred EEEEcCCCccchHHHhhcCCc--cccceeeccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccc
Q 017702 108 QVFLNDHSDNDFNTLFKSLPH--ARKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQC 185 (367)
Q Consensus 108 ~v~~nDlp~NDFn~lf~~l~~--~~~~f~~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~ 185 (367)
.++=-|.-.+-...+.+.... -.++.+......+....+|++|+|-++-++.=-|-.+-. .|.++.
T Consensus 373 ~~iGiE~~~~~~~~~~~~~~~~~l~N~~~~~~~~~~~~~~~~~~sv~~i~i~FPDPWpKkrh-----------~krRl~- 440 (506)
T PRK01544 373 LFIGVEVYLNGVANVLKLAGEQNITNFLLFPNNLDLILNDLPNNSLDGIYILFPDPWIKNKQ-----------KKKRIF- 440 (506)
T ss_pred CEEEEEeeHHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHhcCcccccEEEEECCCCCCCCCC-----------cccccc-
Confidence 233333332222222222111 112222211233456778999999999998888833221 122221
Q ss_pred cCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEEEEe
Q 017702 186 SESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLIL 225 (367)
Q Consensus 186 ~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~ 225 (367)
. ..||..-+.-|+|||.+.+.+
T Consensus 441 ---~---------------~~fl~~~~~~Lk~gG~i~~~T 462 (506)
T PRK01544 441 ---N---------------KERLKILQDKLKDNGNLVFAS 462 (506)
T ss_pred ---C---------------HHHHHHHHHhcCCCCEEEEEc
Confidence 1 148888899999999987655
|
|
| >PRK10611 chemotaxis methyltransferase CheR; Provisional | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.17 Score=48.95 Aligned_cols=43 Identities=12% Similarity=0.280 Sum_probs=26.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSD 116 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~ 116 (367)
+++||..-|||||-=.-.+.-.+.+.+ ... .. .++|+-.|+..
T Consensus 115 ~~irIWSAgCStGEEpYSlAmll~e~~----~~~-----~~---~~~I~atDIs~ 157 (287)
T PRK10611 115 GEYRVWSAAASTGEEPYSIAMTLADTL----GTA-----PG---RWKVFASDIDT 157 (287)
T ss_pred CCEEEEEccccCCHHHHHHHHHHHHhh----ccc-----CC---CcEEEEEECCH
Confidence 469999999999965444432232222 110 11 57899999965
|
|
| >PHA03412 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=94.95 E-value=0.1 Score=49.06 Aligned_cols=72 Identities=7% Similarity=0.078 Sum_probs=40.8
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCcccc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSFH 142 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SFy 142 (367)
..+|+|+|||+|..++.+...+. . .+ ..+|+.-|+-.+-....-+.++. .-+..+ .|.
T Consensus 50 ~grVLDlG~GSG~Lalala~~~~--------~------~~---~~~V~aVEID~~Al~~Ar~n~~~--~~~~~~---D~~ 107 (241)
T PHA03412 50 SGSVVDLCAGIGGLSFAMVHMMM--------Y------AK---PREIVCVELNHTYYKLGKRIVPE--ATWINA---DAL 107 (241)
T ss_pred CCEEEEccChHHHHHHHHHHhcc--------c------CC---CcEEEEEECCHHHHHHHHhhccC--CEEEEc---chh
Confidence 46999999999999887764331 0 11 23566667754433333223221 223332 343
Q ss_pred ccCCCCCceeEEEec
Q 017702 143 SRLFPRSSIHFVHTS 157 (367)
Q Consensus 143 ~~l~P~~svd~~~S~ 157 (367)
... +++++|+|+|+
T Consensus 108 ~~~-~~~~FDlIIsN 121 (241)
T PHA03412 108 TTE-FDTLFDMAISN 121 (241)
T ss_pred ccc-ccCCccEEEEC
Confidence 322 35689999993
|
|
| >PF01739 CheR: CheR methyltransferase, SAM binding domain; InterPro: IPR022642 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.12 Score=47.32 Aligned_cols=115 Identities=23% Similarity=0.383 Sum_probs=59.6
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHh------------hcCCc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLF------------KSLPH 128 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf------------~~l~~ 128 (367)
.+++||...|||+|-=.-.+.-.+-+.. .... .- .++++-+|+.. ..|- +.+|.
T Consensus 30 ~~~lrIWSagCStGeE~YSlAmll~e~~----~~~~----~~---~~~I~atDi~~---~~L~~Ar~G~Y~~~~~~~~~~ 95 (196)
T PF01739_consen 30 GRPLRIWSAGCSTGEEPYSLAMLLLELL----PGAL----GW---DFRILATDISP---SALEKARAGIYPERSLRGLPP 95 (196)
T ss_dssp -S-EEEEETT-TTTHHHHHHHHHHHHHH-----S-T----T----SEEEEEEES-H---HHHHHHHHTEEEGGGGTTS-H
T ss_pred CCCeEEEECCCCCChhHHHHHHHHHHHh----cccC----CC---ceEEEEEECCH---HHHHHHHhCCCCHHHHhhhHH
Confidence 4689999999999965544432222211 1110 11 57899999963 2222 22222
Q ss_pred c--ccceeeccCcccc-----------------ccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCC
Q 017702 129 A--RKYFAAGLPGSFH-----------------SRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESN 189 (367)
Q Consensus 129 ~--~~~f~~gvp~SFy-----------------~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~ 189 (367)
. ..||....++.|- +.-.|.+.+|+|+|-+.|-+++..
T Consensus 96 ~~~~ryf~~~~~~~~~v~~~lr~~V~F~~~NL~~~~~~~~~fD~I~CRNVlIYF~~~----------------------- 152 (196)
T PF01739_consen 96 AYLRRYFTERDGGGYRVKPELRKMVRFRRHNLLDPDPPFGRFDLIFCRNVLIYFDPE----------------------- 152 (196)
T ss_dssp HHHHHHEEEE-CCCTTE-HHHHTTEEEEE--TT-S------EEEEEE-SSGGGS-HH-----------------------
T ss_pred HHHHHhccccCCCceeEChHHcCceEEEecccCCCCcccCCccEEEecCEEEEeCHH-----------------------
Confidence 1 3566444443332 223466889999998877775521
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHhhccCceEEEEe
Q 017702 190 IEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLIL 225 (367)
Q Consensus 190 ~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~ 225 (367)
.-.+.++.-++.|+|||.|++.-
T Consensus 153 -------------~~~~vl~~l~~~L~pgG~L~lG~ 175 (196)
T PF01739_consen 153 -------------TQQRVLRRLHRSLKPGGYLFLGH 175 (196)
T ss_dssp -------------HHHHHHHHHGGGEEEEEEEEE-T
T ss_pred -------------HHHHHHHHHHHHcCCCCEEEEec
Confidence 22357888889999999987643
|
The reaction is catalysed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. Three classes of DNA Mtases transfer the methyl group from AdoMet to the target base to form either N-6-methyladenine, or N-4-methylcytosine, or C-5- methylcytosine. In C-5-cytosine Mtases, ten conserved motifs are arranged in the same order []. Motif I (a glycine-rich or closely related consensus sequence; FAGxGG in M.HhaI []), shared by other AdoMet-Mtases [], is part of the cofactor binding site and motif IV (PCQ) is part of the catalytic site. In contrast, sequence comparison among N-6-adenine and N-4-cytosine Mtases indicated two of the conserved segments [], although more conserved segments may be present. One of them corresponds to motif I in C-5-cytosine Mtases, and the other is named (D/N/S)PP(Y/F). Crystal structures are known for a number of Mtases [, , , ]. The cofactor binding sites are almost identical and the essential catalytic amino acids coincide. The comparable protein folding and the existence of equivalent amino acids in similar secondary and tertiary positions indicate that many (if not all) AdoMet-Mtases have a common catalytic domain structure. This permits tertiary structure prediction of other DNA, RNA, protein, and small-molecule AdoMet-Mtases from their amino acid sequences []. Flagellated bacteria swim towards favourable chemicals and away from deleterious ones. Sensing of chemoeffector gradients involves chemotaxis receptors, transmembrane (TM) proteins that detect stimuli through their periplasmic domains and transduce the signals via their cytoplasmic domains []. Signalling outputs from these receptors are influenced both by the binding of the chemoeffector ligand to their periplasmic domains and by methylation of specific glutamate residues on their cytoplasmic domains. Methylation is catalysed by CheR, an S-adenosylmethionine-dependent methyltransferase [], which reversibly methylates specific glutamate residues within a coiled coil region, to form gamma-glutamyl methyl ester residues [, ]. The structure of the Salmonella typhimurium chemotaxis receptor methyltransferase CheR, bound to S-adenosylhomocysteine, has been determined to a resolution of 2.0 A []. The structure reveals CheR to be a two-domain protein, with a smaller N-terminal helical domain linked via a single polypeptide connection to a larger C-terminal alpha/beta domain. The C-terminal domain has the characteristics of a nucleotide-binding fold, with an insertion of a small anti-parallel beta-sheet subdomain. The S-adenosylhomocysteine-binding site is formed mainly by the large domain, with contributions from residues within the N-terminal domain and the linker region []. CheR proteins are part of the chemotaxis signaling mechanism which methylates the chemotaxis receptor at specific glutamate residues. This entry refers to the C-terminal SAM-binding domain of the CherR-type MCP methyltransferases, which are found in bacteria, archaea and green plants. This entry is found in association with PF03705 from PFAM. ; PDB: 1AF7_A 1BC5_A. |
| >PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes | Back alignment and domain information |
|---|
Probab=94.84 E-value=0.7 Score=42.88 Aligned_cols=145 Identities=22% Similarity=0.302 Sum_probs=80.9
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc--c----ccc--
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH--A----RKY-- 132 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~--~----~~~-- 132 (367)
...-||++-|||.|.....+.+. -.+|+--|+...=-...|+.-.. . ...
T Consensus 36 ~~~~rvLvPgCG~g~D~~~La~~----------------------G~~VvGvDls~~Ai~~~~~e~~~~~~~~~~~~~~~ 93 (218)
T PF05724_consen 36 KPGGRVLVPGCGKGYDMLWLAEQ----------------------GHDVVGVDLSPTAIEQAFEENNLEPTVTSVGGFKR 93 (218)
T ss_dssp STSEEEEETTTTTSCHHHHHHHT----------------------TEEEEEEES-HHHHHHHHHHCTTEEECTTCTTEEE
T ss_pred CCCCeEEEeCCCChHHHHHHHHC----------------------CCeEEEEecCHHHHHHHHHHhccCCCcccccceee
Confidence 34579999999999998777620 13566666654333333332210 0 000
Q ss_pred ----eeeccCccccccCCCC--CceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHH
Q 017702 133 ----FAAGLPGSFHSRLFPR--SSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMES 206 (367)
Q Consensus 133 ----f~~gvp~SFy~~l~P~--~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~ 206 (367)
-+.-+-|.|++ +-|. +++|+|+=-++|+=| |+ +..+ +
T Consensus 94 ~~~~~i~~~~gDfF~-l~~~~~g~fD~iyDr~~l~Al---pp----------------------~~R~-----------~ 136 (218)
T PF05724_consen 94 YQAGRITIYCGDFFE-LPPEDVGKFDLIYDRTFLCAL---PP----------------------EMRE-----------R 136 (218)
T ss_dssp ETTSSEEEEES-TTT-GGGSCHHSEEEEEECSSTTTS----G----------------------GGHH-----------H
T ss_pred ecCCceEEEEccccc-CChhhcCCceEEEEecccccC---CH----------------------HHHH-----------H
Confidence 01112234665 2222 358999988888763 32 2233 3
Q ss_pred HHHHHHHhhccCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHh
Q 017702 207 FLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRT 286 (367)
Q Consensus 207 fL~~Ra~EL~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~ 286 (367)
+.++-++-|+|||++++.++- .+... ..-|-|.-+.+|+++++..
T Consensus 137 Ya~~l~~ll~p~g~~lLi~l~-~~~~~----------------------------------~~GPPf~v~~~ev~~l~~~ 181 (218)
T PF05724_consen 137 YAQQLASLLKPGGRGLLITLE-YPQGE----------------------------------MEGPPFSVTEEEVRELFGP 181 (218)
T ss_dssp HHHHHHHCEEEEEEEEEEEEE-S-CSC----------------------------------SSSSS----HHHHHHHHTT
T ss_pred HHHHHHHHhCCCCcEEEEEEE-cCCcC----------------------------------CCCcCCCCCHHHHHHHhcC
Confidence 455667889999996555554 22211 1236666789999999984
Q ss_pred CCceEEeEEEEEecC
Q 017702 287 NGNFTIEKMEKLSQP 301 (367)
Q Consensus 287 ~g~F~I~~lE~~~~p 301 (367)
.|+|+.++..+..
T Consensus 182 --~f~i~~l~~~~~~ 194 (218)
T PF05724_consen 182 --GFEIEELEEEDSI 194 (218)
T ss_dssp --TEEEEEEEEEE-T
T ss_pred --CcEEEEEeccccc
Confidence 4999999986543
|
Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B. |
| >PLN02781 Probable caffeoyl-CoA O-methyltransferase | Back alignment and domain information |
|---|
Probab=94.59 E-value=0.045 Score=51.23 Aligned_cols=23 Identities=13% Similarity=0.198 Sum_probs=18.8
Q ss_pred CCceEEeeecCCCCcccHHHHHH
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQN 83 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ 83 (367)
.++-+|+|+|||+|.-++.+...
T Consensus 67 ~~~~~vLEiGt~~G~s~l~la~~ 89 (234)
T PLN02781 67 MNAKNTLEIGVFTGYSLLTTALA 89 (234)
T ss_pred hCCCEEEEecCcccHHHHHHHHh
Confidence 34679999999999999877643
|
|
| >PRK11783 rlmL 23S rRNA m(2)G2445 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=94.54 E-value=0.22 Score=54.13 Aligned_cols=28 Identities=18% Similarity=0.298 Sum_probs=21.2
Q ss_pred HHhhHHHHHHHHHHhhccCceEEEEeec
Q 017702 200 YKNDMESFLNARAEELVPGGLMVLILAA 227 (367)
Q Consensus 200 ~~~D~~~fL~~Ra~EL~pGG~lvl~~~g 227 (367)
..+|+..++..-.+-|+|||.++++...
T Consensus 631 ~~~~y~~l~~~a~~lL~~gG~l~~~~~~ 658 (702)
T PRK11783 631 VQRDHVALIKDAKRLLRPGGTLYFSNNK 658 (702)
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 3456667888878899999998876543
|
|
| >PF01234 NNMT_PNMT_TEMT: NNMT/PNMT/TEMT family; InterPro: IPR000940 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=94.47 E-value=0.061 Score=51.16 Aligned_cols=82 Identities=21% Similarity=0.291 Sum_probs=56.4
Q ss_pred CceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEEEEeecc
Q 017702 149 SSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAAV 228 (367)
Q Consensus 149 ~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g~ 228 (367)
...|.+.|++||.=.++-++ .+++-|++-+.-|||||.|++....
T Consensus 157 ~~~D~v~s~fcLE~a~~d~~----------------------------------~y~~al~ni~~lLkpGG~Lil~~~l- 201 (256)
T PF01234_consen 157 PKFDCVISSFCLESACKDLD----------------------------------EYRRALRNISSLLKPGGHLILAGVL- 201 (256)
T ss_dssp SSEEEEEEESSHHHH-SSHH----------------------------------HHHHHHHHHHTTEEEEEEEEEEEES-
T ss_pred cchhhhhhhHHHHHHcCCHH----------------------------------HHHHHHHHHHHHcCCCcEEEEEEEc-
Confidence 46999999999988664321 3344677788999999999998876
Q ss_pred cCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEE
Q 017702 229 VPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKME 296 (367)
Q Consensus 229 ~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE 296 (367)
..+... -| .-.+|...-+.+.++++|+++| |+|+..+
T Consensus 202 ~~t~Y~----------------------vG--------~~~F~~l~l~ee~v~~al~~aG-~~i~~~~ 238 (256)
T PF01234_consen 202 GSTYYM----------------------VG--------GHKFPCLPLNEEFVREALEEAG-FDIEDLE 238 (256)
T ss_dssp S-SEEE----------------------ET--------TEEEE---B-HHHHHHHHHHTT-EEEEEEE
T ss_pred CceeEE----------------------EC--------CEecccccCCHHHHHHHHHHcC-CEEEecc
Confidence 322111 01 1136777889999999999997 9999888
|
The reaction is catalysed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. Three classes of DNA Mtases transfer the methyl group from AdoMet to the target base to form either N-6-methyladenine, or N-4-methylcytosine, or C-5- methylcytosine. In C-5-cytosine Mtases, ten conserved motifs are arranged in the same order []. Motif I (a glycine-rich or closely related consensus sequence; FAGxGG in M.HhaI []), shared by other AdoMet-Mtases [], is part of the cofactor binding site and motif IV (PCQ) is part of the catalytic site. In contrast, sequence comparison among N-6-adenine and N-4-cytosine Mtases indicated two of the conserved segments [], although more conserved segments may be present. One of them corresponds to motif I in C-5-cytosine Mtases, and the other is named (D/N/S)PP(Y/F). Crystal structures are known for a number of Mtases [, , , ]. The cofactor binding sites are almost identical and the essential catalytic amino acids coincide. The comparable protein folding and the existence of equivalent amino acids in similar secondary and tertiary positions indicate that many (if not all) AdoMet-Mtases have a common catalytic domain structure. This permits tertiary structure prediction of other DNA, RNA, protein, and small-molecule AdoMet-Mtases from their amino acid sequences []. Several cytoplasmic vertebrate methyltransferases are evolutionary related [], including nicotinamide N-methyltransferase (2.1.1.1 from EC) (NNMT); phenylethanolamine N-methyltransferase (2.1.1.28 from EC) (PNMT); and thioether S-methyltransferase (2.1.1.96 from EC) (TEMT). NNMT catalyzes the N-methylation of nicotinamide and other pyridines to form pyridinium ions. This activity is important for the biotransformation of many drugs and xenobiotic compounds. PNMT catalyzes the last step in catecholamine biosynthesis, the conversion of noradrenalin to adrenalin; and TEMT catalyzes the methylation of dimethyl sulphide into trimethylsulphonium. These three enzymes use S-adenosyl-L-methionine as the methyl donor. They are proteins of 30 to 32 kDa.; GO: 0008168 methyltransferase activity; PDB: 2IIP_C 3ROD_A 2OBF_A 3HCA_B 2ONY_B 3KR1_A 2OPB_B 3KQP_B 2AN4_B 3KQM_A .... |
| >COG1352 CheR Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=94.25 E-value=0.67 Score=44.43 Aligned_cols=116 Identities=24% Similarity=0.403 Sum_probs=70.7
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchH----------HHhhcCCcc--
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFN----------TLFKSLPHA-- 129 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn----------~lf~~l~~~-- 129 (367)
+++||--.|||||-=.-.++-.+.+.... . ... .++++-.|+...--. ..++.++..
T Consensus 96 ~~irIWSaaCStGEEpYSiAm~l~e~~~~----~----~~~---~~~I~AtDId~~~L~~A~~G~Y~~~~~~~~~~~~~~ 164 (268)
T COG1352 96 RPIRIWSAACSTGEEPYSLAMLLLEALGK----L----AGF---RVKILATDIDLSVLEKARAGIYPSRELLRGLPPELL 164 (268)
T ss_pred CceEEEecCcCCCccHHHHHHHHHHHhcc----c----cCC---ceEEEEEECCHHHHHHHhcCCCChhHhhccCCHHHH
Confidence 58999999999997666555444333321 0 123 689999999631111 122223322
Q ss_pred ccceeeccCcccc--------------ccCC---CCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHH
Q 017702 130 RKYFAAGLPGSFH--------------SRLF---PRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEV 192 (367)
Q Consensus 130 ~~~f~~gvp~SFy--------------~~l~---P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~ 192 (367)
++||.-+.+|+|- +-+. ..+-+|+|||=+.|=++++.
T Consensus 165 ~ryF~~~~~~~y~v~~~ir~~V~F~~~NLl~~~~~~~~fD~IfCRNVLIYFd~~-------------------------- 218 (268)
T COG1352 165 RRYFERGGDGSYRVKEELRKMVRFRRHNLLDDSPFLGKFDLIFCRNVLIYFDEE-------------------------- 218 (268)
T ss_pred hhhEeecCCCcEEEChHHhcccEEeecCCCCCccccCCCCEEEEcceEEeeCHH--------------------------
Confidence 4788877777543 1111 33568888886666665531
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhhccCceEEEE
Q 017702 193 VRAYSTQYKNDMESFLNARAEELVPGGLMVLI 224 (367)
Q Consensus 193 ~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~ 224 (367)
.-.+.++.-+.-|+|||.|++-
T Consensus 219 ----------~q~~il~~f~~~L~~gG~LflG 240 (268)
T COG1352 219 ----------TQERILRRFADSLKPGGLLFLG 240 (268)
T ss_pred ----------HHHHHHHHHHHHhCCCCEEEEc
Confidence 1225677888999999998663
|
|
| >KOG1331 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.21 E-value=0.14 Score=49.17 Aligned_cols=55 Identities=22% Similarity=0.195 Sum_probs=41.9
Q ss_pred cccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceE
Q 017702 142 HSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLM 221 (367)
Q Consensus 142 y~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~l 221 (367)
.+-.+++.++|.+.|.+.+||||.-- -=.+.++.-.+.|+|||.+
T Consensus 95 l~~p~~~~s~d~~lsiavihhlsT~~-----------------------------------RR~~~l~e~~r~lrpgg~~ 139 (293)
T KOG1331|consen 95 LKLPFREESFDAALSIAVIHHLSTRE-----------------------------------RRERALEELLRVLRPGGNA 139 (293)
T ss_pred hcCCCCCCccccchhhhhhhhhhhHH-----------------------------------HHHHHHHHHHHHhcCCCce
Confidence 45567889999999999999998421 1113567777899999999
Q ss_pred EEEeecccCCC
Q 017702 222 VLILAAVVPDG 232 (367)
Q Consensus 222 vl~~~g~~~n~ 232 (367)
.+...+ ....
T Consensus 140 lvyvwa-~~q~ 149 (293)
T KOG1331|consen 140 LVYVWA-LEQH 149 (293)
T ss_pred EEEEeh-hhcc
Confidence 998887 5433
|
|
| >PRK10909 rsmD 16S rRNA m(2)G966-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=94.12 E-value=0.3 Score=44.72 Aligned_cols=18 Identities=22% Similarity=0.080 Sum_probs=15.8
Q ss_pred eEEeeecCCCCcccHHHH
Q 017702 64 FKIADLGCSVGPNTLLAV 81 (367)
Q Consensus 64 ~~IaD~GCs~G~nT~~~~ 81 (367)
.+|+|+|||+|..++.++
T Consensus 55 ~~vLDl~~GsG~l~l~~l 72 (199)
T PRK10909 55 ARCLDCFAGSGALGLEAL 72 (199)
T ss_pred CEEEEcCCCccHHHHHHH
Confidence 589999999999998654
|
|
| >COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=94.05 E-value=0.32 Score=46.00 Aligned_cols=45 Identities=22% Similarity=0.396 Sum_probs=33.0
Q ss_pred HHHHHHHHhhccCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhh
Q 017702 206 SFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVD 266 (367)
Q Consensus 206 ~fL~~Ra~EL~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d 266 (367)
+.|.+-++.|+|||.+++-.+. .+.+...+..|.+.|.+..+.++
T Consensus 176 ~~le~~~~~Lkpgg~~~~y~P~----------------veQv~kt~~~l~~~g~~~ie~~E 220 (256)
T COG2519 176 NVLEHVSDALKPGGVVVVYSPT----------------VEQVEKTVEALRERGFVDIEAVE 220 (256)
T ss_pred HHHHHHHHHhCCCcEEEEEcCC----------------HHHHHHHHHHHHhcCccchhhhe
Confidence 4789999999999998887765 25566666667677777654443
|
|
| >PRK15128 23S rRNA m(5)C1962 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=93.94 E-value=0.56 Score=47.45 Aligned_cols=29 Identities=14% Similarity=0.200 Sum_probs=22.4
Q ss_pred HHHhhHHHHHHHHHHhhccCceEEEEeec
Q 017702 199 QYKNDMESFLNARAEELVPGGLMVLILAA 227 (367)
Q Consensus 199 Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g 227 (367)
.+.+++..++..-.+-|+|||.+++....
T Consensus 313 ~~~~~y~~l~~~a~~lLk~gG~lv~~scs 341 (396)
T PRK15128 313 GACRGYKDINMLAIQLLNPGGILLTFSCS 341 (396)
T ss_pred HHHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 34557777888888999999999876643
|
|
| >KOG3191 consensus Predicted N6-DNA-methyltransferase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=93.83 E-value=2.7 Score=38.10 Aligned_cols=126 Identities=13% Similarity=0.193 Sum_probs=65.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCccc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSF 141 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SF 141 (367)
.+.-++|+|||||--|-.+.+.+. | ...++-.|+-.---..-..+... +..-+--|-.++
T Consensus 43 ~~~i~lEIG~GSGvvstfL~~~i~----------------~---~~~~latDiNp~A~~~Tl~TA~~-n~~~~~~V~tdl 102 (209)
T KOG3191|consen 43 NPEICLEIGCGSGVVSTFLASVIG----------------P---QALYLATDINPEALEATLETARC-NRVHIDVVRTDL 102 (209)
T ss_pred CceeEEEecCCcchHHHHHHHhcC----------------C---CceEEEecCCHHHHHHHHHHHHh-cCCccceeehhH
Confidence 468899999999999888876663 2 23445556531111111111000 011111122334
Q ss_pred cccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHH--HHHHhhHHHHHHHHHHhhccCc
Q 017702 142 HSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYS--TQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 142 y~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~--~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
..-|-+ +++|+.+= .|+-+.....+. - ..-...+|+ +-...=..+||..--.-|.|-|
T Consensus 103 ~~~l~~-~~VDvLvf---------NPPYVpt~~~~i------~----~~~i~~a~aGG~~Gr~v~d~ll~~v~~iLSp~G 162 (209)
T KOG3191|consen 103 LSGLRN-ESVDVLVF---------NPPYVPTSDEEI------G----DEGIASAWAGGKDGREVTDRLLPQVPDILSPRG 162 (209)
T ss_pred Hhhhcc-CCccEEEE---------CCCcCcCCcccc------h----hHHHHHHHhcCcchHHHHHHHHhhhhhhcCcCc
Confidence 444444 78887665 344333322211 0 111223444 3333445678877778888999
Q ss_pred eEEEEeec
Q 017702 220 LMVLILAA 227 (367)
Q Consensus 220 ~lvl~~~g 227 (367)
.+.+...-
T Consensus 163 v~Ylv~~~ 170 (209)
T KOG3191|consen 163 VFYLVALR 170 (209)
T ss_pred eEEeeehh
Confidence 98888864
|
|
| >KOG1500 consensus Protein arginine N-methyltransferase CARM1 [Posttranslational modification, protein turnover, chaperones; Transcription] | Back alignment and domain information |
|---|
Probab=93.69 E-value=0.48 Score=46.67 Aligned_cols=24 Identities=38% Similarity=0.540 Sum_probs=19.2
Q ss_pred hhHHHHHHHHHHhhccCceEEEEee
Q 017702 202 NDMESFLNARAEELVPGGLMVLILA 226 (367)
Q Consensus 202 ~D~~~fL~~Ra~EL~pGG~lvl~~~ 226 (367)
+=++.+|.+| +-|+|.|.|+=+..
T Consensus 260 RMLEsYl~Ar-k~l~P~GkMfPT~g 283 (517)
T KOG1500|consen 260 RMLESYLHAR-KWLKPNGKMFPTVG 283 (517)
T ss_pred HHHHHHHHHH-hhcCCCCcccCccc
Confidence 3566789999 99999999965553
|
|
| >PF01728 FtsJ: FtsJ-like methyltransferase; InterPro: IPR002877 RrmJ (FtsJ) is a well conserved heat shock protein present in prokaryotes, archaea, and eukaryotes | Back alignment and domain information |
|---|
Probab=93.11 E-value=0.43 Score=42.31 Aligned_cols=37 Identities=27% Similarity=0.282 Sum_probs=26.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCcc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDN 117 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~N 117 (367)
+..+|+|+|||.|.-|..+++.. .+ .-.|+--|+...
T Consensus 23 ~~~~vlDlG~aPGGws~~~~~~~----------------~~---~~~v~avDl~~~ 59 (181)
T PF01728_consen 23 KGFTVLDLGAAPGGWSQVLLQRG----------------GP---AGRVVAVDLGPM 59 (181)
T ss_dssp TTEEEEEET-TTSHHHHHHHTST----------------TT---EEEEEEEESSST
T ss_pred cccEEEEcCCcccceeeeeeecc----------------cc---cceEEEEecccc
Confidence 57999999999999998887333 11 346888888754
|
RrmJ is responsible for methylating 23 S rRNA at position U2552 in the aminoacyl (A)1-site of the ribosome []. U2552 is one of the five universally conserved A-loop residues and has been shown to be methylated at the ribose 2'-OH group in the majority of organisms investigated so far. This suggests that this modification plays an important role in the A-loop function. RrmJ recognises its methylation target only when the 23 S rRNA is present in 50 S ribosomal subunits. This suggests that the RrmJ-mediated methylation must occur late in the maturation process of the ribosome. This is in contrast to other known 23 S rRNA modifications that occur in earlier maturation steps. The 1.5 A crystal structure of RrmJ in complex with its cofactor S-adenosylmethionine revealed that RrmJ has a methyltransferase fold. The active site of RrmJ appears to be formed by a catalytic triad consisting of two lysine residues and the negatively charged aspartate residue. Another highly conserved glutamate residue that is present in the active site of RrmJ appears to play only a minor role in the methyltransfer reaction in vivo []. ; GO: 0003676 nucleic acid binding, 0008168 methyltransferase activity, 0032259 methylation; PDB: 3GCZ_A 2PLW_A 2NYU_A 2OXT_C 3EMD_A 3ELY_A 3ELW_A 3ELU_A 3ELD_A 3EMB_A .... |
| >TIGR03439 methyl_EasF probable methyltransferase domain, EasF family | Back alignment and domain information |
|---|
Probab=92.88 E-value=0.65 Score=45.64 Aligned_cols=50 Identities=14% Similarity=0.222 Sum_probs=32.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP 127 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~ 127 (367)
...+|+|+|||+|.-|..+++.+.. . .. .+.++=-|+...--....+.|.
T Consensus 76 ~~~~lIELGsG~~~Kt~~LL~aL~~----~---------~~---~~~Y~plDIS~~~L~~a~~~L~ 125 (319)
T TIGR03439 76 SGSMLVELGSGNLRKVGILLEALER----Q---------KK---SVDYYALDVSRSELQRTLAELP 125 (319)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHh----c---------CC---CceEEEEECCHHHHHHHHHhhh
Confidence 3468999999999999999876621 0 11 3467777776533333444444
|
This model represents an uncharacterized domain of about 300 amino acids with homology to S-adenosylmethionine-dependent methyltransferases. Proteins with this domain are exclusively fungal. A few, such as EasF from Neotyphodium lolii, are associated with the biosynthesis of ergot alkaloids, a class of fungal secondary metabolites. EasF may, in fact, be the AdoMet:dimethylallyltryptophan N-methyltransferase, the enzyme that follows tryptophan dimethylallyltransferase (DMATS) in ergot alkaloid biosynthesis. Several other members of this family, including mug158 (meiotically up-regulated gene 158 protein) from Schizosaccharomyces pombe, contain an additional uncharacterized domain DUF323 (pfam03781). |
| >KOG1271 consensus Methyltransferases [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.40 E-value=1.8 Score=39.25 Aligned_cols=18 Identities=22% Similarity=0.254 Sum_probs=14.4
Q ss_pred eEEeeecCCCCcccHHHH
Q 017702 64 FKIADLGCSVGPNTLLAV 81 (367)
Q Consensus 64 ~~IaD~GCs~G~nT~~~~ 81 (367)
-||+|+|||-|..-..+.
T Consensus 69 ~~VlDLGtGNG~~L~~L~ 86 (227)
T KOG1271|consen 69 DRVLDLGTGNGHLLFQLA 86 (227)
T ss_pred cceeeccCCchHHHHHHH
Confidence 399999999997665554
|
|
| >PRK13168 rumA 23S rRNA m(5)U1939 methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=92.29 E-value=1.3 Score=45.31 Aligned_cols=20 Identities=30% Similarity=0.383 Sum_probs=17.2
Q ss_pred ceEEeeecCCCCcccHHHHH
Q 017702 63 PFKIADLGCSVGPNTLLAVQ 82 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~ 82 (367)
..+|+|+|||+|..|+.+..
T Consensus 298 ~~~VLDlgcGtG~~sl~la~ 317 (443)
T PRK13168 298 GDRVLDLFCGLGNFTLPLAR 317 (443)
T ss_pred CCEEEEEeccCCHHHHHHHH
Confidence 36899999999999998764
|
|
| >PF06859 Bin3: Bicoid-interacting protein 3 (Bin3); InterPro: IPR010675 This entry represents a conserved region of approximately 120 residues within eukaryotic Bicoid-interacting protein 3 (Bin3) | Back alignment and domain information |
|---|
Probab=92.24 E-value=0.19 Score=41.59 Aligned_cols=44 Identities=18% Similarity=0.340 Sum_probs=34.7
Q ss_pred eeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEEEEee
Q 017702 151 IHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILA 226 (367)
Q Consensus 151 vd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~ 226 (367)
+|+|.|.+...| ||. .....-+.+|++.-+.-|+|||+|+++--
T Consensus 2 yDvilclSVtkW--------------------IHL------------n~GD~Gl~~~f~~~~~~L~pGG~lilEpQ 45 (110)
T PF06859_consen 2 YDVILCLSVTKW--------------------IHL------------NWGDEGLKRFFRRIYSLLRPGGILILEPQ 45 (110)
T ss_dssp EEEEEEES-HHH--------------------HHH------------HHHHHHHHHHHHHHHHHEEEEEEEEEE--
T ss_pred ccEEEEEEeeEE--------------------EEe------------cCcCHHHHHHHHHHHHhhCCCCEEEEeCC
Confidence 799999999999 443 33445788899999999999999999875
|
Bin3, which shows similarity to a number of protein methyltransferases that modify RNA-binding proteins, interacts with Bicoid, which itself directs pattern formation in the early Drosophila embryo. The interaction might allow Bicoid to switch between its dual roles in transcription and translation []. Note that proteins of the entry contain a conserved HLN motif.; GO: 0008168 methyltransferase activity; PDB: 3G07_B. |
| >PF04672 Methyltransf_19: S-adenosyl methyltransferase; InterPro: IPR006764 This is a family of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=91.52 E-value=7.5 Score=37.26 Aligned_cols=64 Identities=14% Similarity=0.257 Sum_probs=34.2
Q ss_pred HHHHHHHHHhhccCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHH
Q 017702 205 ESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAII 284 (367)
Q Consensus 205 ~~fL~~Ra~EL~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l 284 (367)
...++.-.+.|.||.+|+++-.. .+. .+ ...+.+...+ ..-..|.+.||.+|+.+.+
T Consensus 170 ~~iv~~l~d~lapGS~L~ish~t-~d~-~p-------~~~~~~~~~~--------------~~~~~~~~~Rs~~ei~~~f 226 (267)
T PF04672_consen 170 AGIVARLRDALAPGSYLAISHAT-DDG-AP-------ERAEALEAVY--------------AQAGSPGRPRSREEIAAFF 226 (267)
T ss_dssp HHHHHHHHCCS-TT-EEEEEEEB--TT-SH-------HHHHHHHHHH--------------HHCCS----B-HHHHHHCC
T ss_pred HHHHHHHHHhCCCCceEEEEecC-CCC-CH-------HHHHHHHHHH--------------HcCCCCceecCHHHHHHHc
Confidence 34666667899999999999997 332 11 0012222222 2235689999999999988
Q ss_pred HhCCceEEeE
Q 017702 285 RTNGNFTIEK 294 (367)
Q Consensus 285 ~~~g~F~I~~ 294 (367)
. +|++..
T Consensus 227 ~---g~elve 233 (267)
T PF04672_consen 227 D---GLELVE 233 (267)
T ss_dssp T---TSEE-T
T ss_pred C---CCccCC
Confidence 5 377753
|
; PDB: 3GIW_A 3GO4_A 2QE6_A. |
| >PF08123 DOT1: Histone methylation protein DOT1 ; InterPro: IPR013110 The DOT1 domain regulates gene expression by methylating histone H3 [] | Back alignment and domain information |
|---|
Probab=91.37 E-value=1.2 Score=41.02 Aligned_cols=22 Identities=27% Similarity=0.342 Sum_probs=15.5
Q ss_pred hhHHHHHHHHHHhhccCceEEE
Q 017702 202 NDMESFLNARAEELVPGGLMVL 223 (367)
Q Consensus 202 ~D~~~fL~~Ra~EL~pGG~lvl 223 (367)
.|+..-|..+..+||+|-++|.
T Consensus 135 ~~l~~~L~~~~~~lk~G~~IIs 156 (205)
T PF08123_consen 135 PDLNLALAELLLELKPGARIIS 156 (205)
T ss_dssp HHHHHHHHHHHTTS-TT-EEEE
T ss_pred HHHHHHHHHHHhcCCCCCEEEE
Confidence 4666778888999999977653
|
H3 methylation by DOT1 has been shown to be required for the DNA damage checkpoint in yeast [].; GO: 0018024 histone-lysine N-methyltransferase activity; PDB: 4ER3_A 4ER6_A 4EQZ_A 1NW3_A 3UWP_A 4ER5_A 3QOX_A 3SX0_A 4ER7_A 3SR4_A .... |
| >PF11968 DUF3321: Putative methyltransferase (DUF3321); InterPro: IPR021867 This family is conserved in fungi and is annotated as being a nucleolar protein | Back alignment and domain information |
|---|
Probab=90.49 E-value=5.7 Score=36.91 Aligned_cols=93 Identities=22% Similarity=0.329 Sum_probs=61.7
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCccc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSF 141 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SF 141 (367)
..++++|+||=+..|...- .+ .|.|.--||-+.+ .. + .--.|
T Consensus 51 ~~lrlLEVGals~~N~~s~--------------------~~---~fdvt~IDLns~~-~~----I----------~qqDF 92 (219)
T PF11968_consen 51 PKLRLLEVGALSTDNACST--------------------SG---WFDVTRIDLNSQH-PG----I----------LQQDF 92 (219)
T ss_pred ccceEEeecccCCCCcccc--------------------cC---ceeeEEeecCCCC-CC----c----------eeecc
Confidence 4699999999888877643 12 3556666775322 00 0 01136
Q ss_pred cccCCC---CCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccC
Q 017702 142 HSRLFP---RSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPG 218 (367)
Q Consensus 142 y~~l~P---~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 218 (367)
.++-+| .+.+|+|.+|-.|.+ +|++.. =-.-|++-.+-|+|+
T Consensus 93 m~rplp~~~~e~FdvIs~SLVLNf---VP~p~~--------------------------------RG~Ml~r~~~fL~~~ 137 (219)
T PF11968_consen 93 MERPLPKNESEKFDVISLSLVLNF---VPDPKQ--------------------------------RGEMLRRAHKFLKPP 137 (219)
T ss_pred ccCCCCCCcccceeEEEEEEEEee---CCCHHH--------------------------------HHHHHHHHHHHhCCC
Confidence 666554 689999999999988 664211 113566677788999
Q ss_pred ce-----EEEEeec
Q 017702 219 GL-----MVLILAA 227 (367)
Q Consensus 219 G~-----lvl~~~g 227 (367)
|. |+++++-
T Consensus 138 g~~~~~~LFlVlP~ 151 (219)
T PF11968_consen 138 GLSLFPSLFLVLPL 151 (219)
T ss_pred CccCcceEEEEeCc
Confidence 99 9888874
|
|
| >PRK00274 ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein; Reviewed | Back alignment and domain information |
|---|
Probab=90.43 E-value=0.12 Score=49.33 Aligned_cols=20 Identities=15% Similarity=0.192 Sum_probs=17.8
Q ss_pred ceEEeeecCCCCcccHHHHH
Q 017702 63 PFKIADLGCSVGPNTLLAVQ 82 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~ 82 (367)
..+|+|+|||+|..|..+.+
T Consensus 43 ~~~VLEiG~G~G~lt~~L~~ 62 (272)
T PRK00274 43 GDNVLEIGPGLGALTEPLLE 62 (272)
T ss_pred cCeEEEeCCCccHHHHHHHH
Confidence 46899999999999998875
|
|
| >PRK11933 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF; Reviewed | Back alignment and domain information |
|---|
Probab=90.34 E-value=2.2 Score=44.17 Aligned_cols=125 Identities=12% Similarity=0.172 Sum_probs=70.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCcc--cc-ceeeccC
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHA--RK-YFAAGLP 138 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~--~~-~f~~gvp 138 (367)
...+|+|++||.|.-|..+.+.+ . . .=.|+-||...+-...|-.++... .+ ......+
T Consensus 113 pg~~VLD~CAAPGgKTt~la~~l--------~--------~---~g~lvA~D~~~~R~~~L~~nl~r~G~~nv~v~~~D~ 173 (470)
T PRK11933 113 APQRVLDMAAAPGSKTTQIAALM--------N--------N---QGAIVANEYSASRVKVLHANISRCGVSNVALTHFDG 173 (470)
T ss_pred CCCEEEEeCCCccHHHHHHHHHc--------C--------C---CCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCch
Confidence 34799999999999999886433 1 1 115778887765555555554321 12 2222333
Q ss_pred ccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHH----HHHHHHHHhhHHHHHHHHHHh
Q 017702 139 GSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVV----RAYSTQYKNDMESFLNARAEE 214 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~----~~y~~Q~~~D~~~fL~~Ra~E 214 (367)
..+ ...+ ++++|.|.- ++||.-... +.| .|+.. ....++..+--..+|..-++-
T Consensus 174 ~~~-~~~~-~~~fD~ILv--------DaPCSG~G~----~rk--------~p~~~~~~s~~~v~~l~~lQ~~iL~~A~~~ 231 (470)
T PRK11933 174 RVF-GAAL-PETFDAILL--------DAPCSGEGT----VRK--------DPDALKNWSPESNLEIAATQRELIESAFHA 231 (470)
T ss_pred hhh-hhhc-hhhcCeEEE--------cCCCCCCcc----ccc--------CHHHhhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 322 1122 245777764 566643221 111 12221 112223333445789999999
Q ss_pred hccCceEEEEeec
Q 017702 215 LVPGGLMVLILAA 227 (367)
Q Consensus 215 L~pGG~lvl~~~g 227 (367)
|+|||+||-++..
T Consensus 232 LkpGG~LVYSTCT 244 (470)
T PRK11933 232 LKPGGTLVYSTCT 244 (470)
T ss_pred cCCCcEEEEECCC
Confidence 9999999888875
|
|
| >TIGR02987 met_A_Alw26 type II restriction m6 adenine DNA methyltransferase, Alw26I/Eco31I/Esp3I family | Back alignment and domain information |
|---|
Probab=89.68 E-value=3.5 Score=43.10 Aligned_cols=23 Identities=22% Similarity=0.189 Sum_probs=19.6
Q ss_pred CceEEeeecCCCCcccHHHHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNI 84 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~i 84 (367)
...+|+|.|||+|...+.++..+
T Consensus 31 ~~~~ilDP~cGsG~fl~~~~~~~ 53 (524)
T TIGR02987 31 TKTKIIDPCCGDGRLIAALLKKN 53 (524)
T ss_pred cceEEEeCCCCccHHHHHHHHHH
Confidence 46899999999999988887654
|
Members of this family are the m6-adenine DNA methyltransferase protein, or domain of a fusion protein that also carries m5 cytosine methyltransferase activity, of type II restriction systems of the Alw26I/Eco31I/Esp3I family. A methyltransferase of this family is alway accompanied by a type II restriction endonuclease from the Alw26I/Eco31I/Esp3I family (TIGR02986) and by an adenine-specific modification methyltransferase. Members of this family are unusual in that regions of similarity to homologs outside this family are circularly permuted. |
| >PF05219 DREV: DREV methyltransferase; InterPro: IPR007884 This family contains DREV protein homologues from several eukaryotes | Back alignment and domain information |
|---|
Probab=89.18 E-value=2.3 Score=40.52 Aligned_cols=21 Identities=29% Similarity=0.229 Sum_probs=18.4
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAVQ 82 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~ 82 (367)
+..+++|+|.|+|.-|..+..
T Consensus 94 ~~~~lLDlGAGdG~VT~~l~~ 114 (265)
T PF05219_consen 94 KDKSLLDLGAGDGEVTERLAP 114 (265)
T ss_pred cCCceEEecCCCcHHHHHHHh
Confidence 578999999999999998853
|
The function of this protein is unknown []. However, these proteins appear to be related to other methyltransferases. |
| >PRK14896 ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein; Provisional | Back alignment and domain information |
|---|
Probab=88.89 E-value=0.62 Score=44.13 Aligned_cols=20 Identities=15% Similarity=0.051 Sum_probs=17.9
Q ss_pred ceEEeeecCCCCcccHHHHH
Q 017702 63 PFKIADLGCSVGPNTLLAVQ 82 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~ 82 (367)
.-+|+|+|||+|..|..+.+
T Consensus 30 ~~~VLEIG~G~G~lt~~L~~ 49 (258)
T PRK14896 30 GDPVLEIGPGKGALTDELAK 49 (258)
T ss_pred cCeEEEEeCccCHHHHHHHH
Confidence 47899999999999998875
|
|
| >PF07942 N2227: N2227-like protein; InterPro: IPR012901 This family features sequences that are similar to a region of hypothetical yeast gene product N2227 (P53934 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=88.69 E-value=22 Score=34.19 Aligned_cols=108 Identities=19% Similarity=0.264 Sum_probs=63.8
Q ss_pred eeccCccccccCCCC---CceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHH
Q 017702 134 AAGLPGSFHSRLFPR---SSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNA 210 (367)
Q Consensus 134 ~~gvp~SFy~~l~P~---~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~ 210 (367)
.+.+.|+|-+---++ ++.|.|++.+=+ .. ++++-.+|..
T Consensus 146 ~sm~aGDF~e~y~~~~~~~~~d~VvT~FFI---DT-----------------------------------A~Ni~~Yi~t 187 (270)
T PF07942_consen 146 LSMCAGDFLEVYGPDENKGSFDVVVTCFFI---DT-----------------------------------AENIIEYIET 187 (270)
T ss_pred eeEecCccEEecCCcccCCcccEEEEEEEe---ec-----------------------------------hHHHHHHHHH
Confidence 445556777665555 789988885221 11 2356678999
Q ss_pred HHHhhccCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCce
Q 017702 211 RAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNF 290 (367)
Q Consensus 211 Ra~EL~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F 290 (367)
..+-||||| +...+|+.- .+. + ++ + +. +-...-.|.||++.+++.-| |
T Consensus 188 I~~lLkpgG--~WIN~GPLl-----yh~------~-------~~---~-~~-------~~~sveLs~eEi~~l~~~~G-F 235 (270)
T PF07942_consen 188 IEHLLKPGG--YWINFGPLL-----YHF------E-------PM---S-IP-------NEMSVELSLEEIKELIEKLG-F 235 (270)
T ss_pred HHHHhccCC--EEEecCCcc-----ccC------C-------CC---C-CC-------CCcccCCCHHHHHHHHHHCC-C
Confidence 999999999 345555111 110 0 00 0 00 00013678999999999987 9
Q ss_pred EEeEEEE-EecCCCCCCHHHHHH
Q 017702 291 TIEKMEK-LSQPRRRITANEYAS 312 (367)
Q Consensus 291 ~I~~lE~-~~~p~~~~~~~~v~~ 312 (367)
++++-+. .... .-.+++.+..
T Consensus 236 ~~~~~~~~i~~~-Y~~d~~Sm~q 257 (270)
T PF07942_consen 236 EIEKEESSILSG-YTTDPESMMQ 257 (270)
T ss_pred EEEEEEEeeecC-CCCCHHHHhh
Confidence 9987666 3332 3345555543
|
This is thought to be expressed during meiosis and may be involved in the defence response to stressful conditions []. |
| >PLN02823 spermine synthase | Back alignment and domain information |
|---|
Probab=88.62 E-value=1.2 Score=44.05 Aligned_cols=21 Identities=14% Similarity=0.173 Sum_probs=16.6
Q ss_pred CCceEEeeecCCCCcccHHHH
Q 017702 61 LKPFKIADLGCSVGPNTLLAV 81 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~ 81 (367)
+.+-+|+.+|+|.|.....++
T Consensus 102 ~~pk~VLiiGgG~G~~~re~l 122 (336)
T PLN02823 102 PNPKTVFIMGGGEGSTAREVL 122 (336)
T ss_pred CCCCEEEEECCCchHHHHHHH
Confidence 356799999999997776554
|
|
| >PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases | Back alignment and domain information |
|---|
Probab=88.30 E-value=0.23 Score=45.73 Aligned_cols=75 Identities=13% Similarity=0.193 Sum_probs=41.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHH----hhcCCc-cccceeec
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTL----FKSLPH-ARKYFAAG 136 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~l----f~~l~~-~~~~f~~g 136 (367)
++-+|+++||++|.-|+.++..+ + + .-+|+--|.-. +...+ |+...- .+--+..|
T Consensus 45 ~~k~vLEIGt~~GySal~la~~l--------~--------~---~g~i~tiE~~~-~~~~~A~~~~~~ag~~~~I~~~~g 104 (205)
T PF01596_consen 45 RPKRVLEIGTFTGYSALWLAEAL--------P--------E---DGKITTIEIDP-ERAEIARENFRKAGLDDRIEVIEG 104 (205)
T ss_dssp T-SEEEEESTTTSHHHHHHHHTS--------T--------T---TSEEEEEESSH-HHHHHHHHHHHHTTGGGGEEEEES
T ss_pred CCceEEEeccccccHHHHHHHhh--------c--------c---cceEEEecCcH-HHHHHHHHHHHhcCCCCcEEEEEe
Confidence 45799999999999999988543 1 1 11344434321 11121 111111 12235666
Q ss_pred cCccccccCCCC---CceeEEEe
Q 017702 137 LPGSFHSRLFPR---SSIHFVHT 156 (367)
Q Consensus 137 vp~SFy~~l~P~---~svd~~~S 156 (367)
....+..++.+. +.+||+|-
T Consensus 105 da~~~l~~l~~~~~~~~fD~VFi 127 (205)
T PF01596_consen 105 DALEVLPELANDGEEGQFDFVFI 127 (205)
T ss_dssp -HHHHHHHHHHTTTTTSEEEEEE
T ss_pred ccHhhHHHHHhccCCCceeEEEE
Confidence 666666776654 47999987
|
The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A .... |
| >PF13679 Methyltransf_32: Methyltransferase domain | Back alignment and domain information |
|---|
Probab=88.28 E-value=0.71 Score=39.49 Aligned_cols=23 Identities=17% Similarity=0.235 Sum_probs=20.3
Q ss_pred CCCceEEeeecCCCCcccHHHHH
Q 017702 60 TLKPFKIADLGCSVGPNTLLAVQ 82 (367)
Q Consensus 60 ~~~~~~IaD~GCs~G~nT~~~~~ 82 (367)
.....+|+|+|||.|..|+.+..
T Consensus 23 ~~~~~~vvD~GsG~GyLs~~La~ 45 (141)
T PF13679_consen 23 SKRCITVVDLGSGKGYLSRALAH 45 (141)
T ss_pred cCCCCEEEEeCCChhHHHHHHHH
Confidence 35689999999999999999875
|
|
| >PLN02589 caffeoyl-CoA O-methyltransferase | Back alignment and domain information |
|---|
Probab=88.23 E-value=1.2 Score=42.20 Aligned_cols=23 Identities=13% Similarity=0.219 Sum_probs=19.2
Q ss_pred CCceEEeeecCCCCcccHHHHHH
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQN 83 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ 83 (367)
.++-+|+++|+++|.-|+.++..
T Consensus 78 ~~ak~iLEiGT~~GySal~la~a 100 (247)
T PLN02589 78 INAKNTMEIGVYTGYSLLATALA 100 (247)
T ss_pred hCCCEEEEEeChhhHHHHHHHhh
Confidence 35679999999999999987643
|
|
| >COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=88.20 E-value=0.86 Score=41.44 Aligned_cols=21 Identities=24% Similarity=0.246 Sum_probs=17.5
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAVQ 82 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~ 82 (367)
..-+|+|+|||||..++...-
T Consensus 45 ~g~~V~DlG~GTG~La~ga~~ 65 (198)
T COG2263 45 EGKTVLDLGAGTGILAIGAAL 65 (198)
T ss_pred CCCEEEEcCCCcCHHHHHHHh
Confidence 346799999999999997754
|
|
| >PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA [] | Back alignment and domain information |
|---|
Probab=88.15 E-value=4.5 Score=38.32 Aligned_cols=22 Identities=14% Similarity=0.211 Sum_probs=16.6
Q ss_pred ceEEeeecCCCCcccHHHHHHH
Q 017702 63 PFKIADLGCSVGPNTLLAVQNI 84 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~i 84 (367)
--+|+|-|.|+|..|..+...+
T Consensus 41 G~~VlEaGtGSG~lt~~l~r~v 62 (247)
T PF08704_consen 41 GSRVLEAGTGSGSLTHALARAV 62 (247)
T ss_dssp T-EEEEE--TTSHHHHHHHHHH
T ss_pred CCEEEEecCCcHHHHHHHHHHh
Confidence 4899999999999999998654
|
; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A. |
| >TIGR00755 ksgA dimethyladenosine transferase | Back alignment and domain information |
|---|
Probab=87.80 E-value=1.6 Score=41.03 Aligned_cols=21 Identities=14% Similarity=0.159 Sum_probs=18.4
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAVQ 82 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~ 82 (367)
+.-+|+|+|||+|..|..+.+
T Consensus 29 ~~~~VLEiG~G~G~lt~~L~~ 49 (253)
T TIGR00755 29 EGDVVLEIGPGLGALTEPLLK 49 (253)
T ss_pred CcCEEEEeCCCCCHHHHHHHH
Confidence 457999999999999998875
|
Alternate name: S-adenosylmethionine--6-N',N'-adenosyl (rRNA) dimethyltransferase |
| >COG4122 Predicted O-methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.70 E-value=1.2 Score=41.39 Aligned_cols=24 Identities=21% Similarity=0.432 Sum_probs=20.8
Q ss_pred CCceEEeeecCCCCcccHHHHHHH
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNI 84 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~i 84 (367)
.++-+|+++|.+.|.-|+.+...+
T Consensus 58 ~~~k~iLEiGT~~GySal~mA~~l 81 (219)
T COG4122 58 SGPKRILEIGTAIGYSALWMALAL 81 (219)
T ss_pred cCCceEEEeecccCHHHHHHHhhC
Confidence 467899999999999999988555
|
|
| >COG0030 KsgA Dimethyladenosine transferase (rRNA methylation) [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=87.22 E-value=1.7 Score=41.40 Aligned_cols=52 Identities=19% Similarity=0.273 Sum_probs=41.5
Q ss_pred ceEEeeecCCCCcccHHHHH------------HHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHh
Q 017702 63 PFKIADLGCSVGPNTLLAVQ------------NIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLF 123 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~------------~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf 123 (367)
.-+|+|+|+|.|..|..+++ .++..++++... .. .++|+..|--.=||..++
T Consensus 31 ~d~VlEIGpG~GaLT~~Ll~~~~~v~aiEiD~~l~~~L~~~~~~------~~---n~~vi~~DaLk~d~~~l~ 94 (259)
T COG0030 31 GDNVLEIGPGLGALTEPLLERAARVTAIEIDRRLAEVLKERFAP------YD---NLTVINGDALKFDFPSLA 94 (259)
T ss_pred CCeEEEECCCCCHHHHHHHhhcCeEEEEEeCHHHHHHHHHhccc------cc---ceEEEeCchhcCcchhhc
Confidence 58999999999999999998 566666665432 23 689999999888888764
|
|
| >PRK04338 N(2),N(2)-dimethylguanosine tRNA methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=87.14 E-value=2.2 Score=43.05 Aligned_cols=48 Identities=10% Similarity=0.023 Sum_probs=32.9
Q ss_pred CCchHHHhhHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCceEEeeecCCCCcccHHHHH
Q 017702 20 DAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIADLGCSVGPNTLLAVQ 82 (367)
Q Consensus 20 g~~sY~~nS~~Q~~~~~~~~~ll~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~nT~~~~~ 82 (367)
++-.|+-|...-+.+...+...+. . ..+..+|+|++||+|..++.+..
T Consensus 30 ~~vFyqp~~~~nrdl~~~v~~~~~----~-----------~~~~~~vLDl~aGsG~~~l~~a~ 77 (382)
T PRK04338 30 APVFYNPRMELNRDISVLVLRAFG----P-----------KLPRESVLDALSASGIRGIRYAL 77 (382)
T ss_pred CCeeeCccccchhhHHHHHHHHHH----h-----------hcCCCEEEECCCcccHHHHHHHH
Confidence 446899887777765554444332 1 11246899999999999998863
|
|
| >PLN02476 O-methyltransferase | Back alignment and domain information |
|---|
Probab=86.91 E-value=0.85 Score=43.96 Aligned_cols=23 Identities=17% Similarity=0.210 Sum_probs=19.4
Q ss_pred CCceEEeeecCCCCcccHHHHHH
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQN 83 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ 83 (367)
.++-+|+|+||++|.-|+.+...
T Consensus 117 ~~ak~VLEIGT~tGySal~lA~a 139 (278)
T PLN02476 117 LGAERCIEVGVYTGYSSLAVALV 139 (278)
T ss_pred cCCCeEEEecCCCCHHHHHHHHh
Confidence 35689999999999999988743
|
|
| >PTZ00338 dimethyladenosine transferase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=86.82 E-value=0.79 Score=44.50 Aligned_cols=21 Identities=19% Similarity=0.161 Sum_probs=18.4
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAVQ 82 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~ 82 (367)
..-+|+|+|||+|..|..+++
T Consensus 36 ~~~~VLEIG~G~G~LT~~Ll~ 56 (294)
T PTZ00338 36 PTDTVLEIGPGTGNLTEKLLQ 56 (294)
T ss_pred CcCEEEEecCchHHHHHHHHH
Confidence 346899999999999998876
|
|
| >PRK11727 23S rRNA mA1618 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=86.54 E-value=1.2 Score=43.95 Aligned_cols=20 Identities=15% Similarity=0.139 Sum_probs=15.7
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAV 81 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~ 81 (367)
...+|+|+|||+|....++.
T Consensus 114 ~~~~vLDIGtGag~I~~lLa 133 (321)
T PRK11727 114 ANVRVLDIGVGANCIYPLIG 133 (321)
T ss_pred CCceEEEecCCccHHHHHHH
Confidence 56899999999996655553
|
|
| >PF09243 Rsm22: Mitochondrial small ribosomal subunit Rsm22; InterPro: IPR015324 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms | Back alignment and domain information |
|---|
Probab=86.39 E-value=5.9 Score=37.93 Aligned_cols=18 Identities=22% Similarity=0.510 Sum_probs=14.5
Q ss_pred CCceEEeeecCCCCcccH
Q 017702 61 LKPFKIADLGCSVGPNTL 78 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~ 78 (367)
-.+.+|+|+|||.|.-+.
T Consensus 32 f~P~~vLD~GsGpGta~w 49 (274)
T PF09243_consen 32 FRPRSVLDFGSGPGTALW 49 (274)
T ss_pred CCCceEEEecCChHHHHH
Confidence 356899999999997554
|
The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. Rsm22 has been identified as a mitochondrial small ribosomal subunit [] and is a methyltransferase. In Schizosaccharomyces pombe (Fission yeast), Rsm22 is tandemly fused to Cox11 (a factor required for copper insertion into cytochrome oxidase) and the two proteins are proteolytically cleaved after import into the mitochondria []. This entry consists of mitochondrial Rsm22 and homologous sequences from bacteria.; GO: 0008168 methyltransferase activity, 0006412 translation |
| >COG0500 SmtA SAM-dependent methyltransferases [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=85.98 E-value=3.7 Score=32.46 Aligned_cols=22 Identities=32% Similarity=0.306 Sum_probs=18.3
Q ss_pred HHHHHHHHhhccCceEEEEeec
Q 017702 206 SFLNARAEELVPGGLMVLILAA 227 (367)
Q Consensus 206 ~fL~~Ra~EL~pGG~lvl~~~g 227 (367)
..+.....-|+|||.+++....
T Consensus 136 ~~~~~~~~~l~~~g~~~~~~~~ 157 (257)
T COG0500 136 KALRELLRVLKPGGRLVLSDLL 157 (257)
T ss_pred HHHHHHHHhcCCCcEEEEEecc
Confidence 3677777889999999999886
|
|
| >PRK03522 rumB 23S rRNA methyluridine methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=85.81 E-value=1 Score=43.89 Aligned_cols=20 Identities=35% Similarity=0.429 Sum_probs=17.4
Q ss_pred ceEEeeecCCCCcccHHHHH
Q 017702 63 PFKIADLGCSVGPNTLLAVQ 82 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~ 82 (367)
.-+|+|+|||+|..|+.+.+
T Consensus 174 ~~~VLDl~cG~G~~sl~la~ 193 (315)
T PRK03522 174 PRSMWDLFCGVGGFGLHCAT 193 (315)
T ss_pred CCEEEEccCCCCHHHHHHHh
Confidence 36899999999999988863
|
|
| >TIGR00478 tly hemolysin TlyA family protein | Back alignment and domain information |
|---|
Probab=84.99 E-value=0.65 Score=43.43 Aligned_cols=21 Identities=38% Similarity=0.319 Sum_probs=18.0
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAVQ 82 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~ 82 (367)
+.-+|+|+|||+|..|..+++
T Consensus 75 ~~~~vlDiG~gtG~~t~~l~~ 95 (228)
T TIGR00478 75 KNKIVLDVGSSTGGFTDCALQ 95 (228)
T ss_pred CCCEEEEcccCCCHHHHHHHH
Confidence 446899999999999998864
|
Hemolysins are exotoxins that attack blood cell membranes and cause cell rupture, often by forming a pore in the membrane. At least two members of this protein family have been characterized indirectly as pore-forming hemolysins, one from the spirochete Serpula (Treponema) hyodysenteriae and one from Mycobacterium tuberculosis. However, homology domains in this protein suggest methyltransferase activity (pfam01728) and RNA-binding activity (pfam01479). |
| >PF02384 N6_Mtase: N-6 DNA Methylase; InterPro: IPR003356 This domain is fpound in N-6 adenine-specific DNA methylase (2 | Back alignment and domain information |
|---|
Probab=81.62 E-value=4.2 Score=39.22 Aligned_cols=134 Identities=16% Similarity=0.194 Sum_probs=63.8
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhh--cCCc-cccceeecc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFK--SLPH-ARKYFAAGL 137 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~--~l~~-~~~~f~~gv 137 (367)
....+|+|-.||+|..-+.++..+.+. ... .+ +.+++-.|.-..-....-. .+.. ....+-...
T Consensus 45 ~~~~~VlDPacGsG~fL~~~~~~i~~~----~~~------~~---~~~i~G~ei~~~~~~la~~nl~l~~~~~~~~~i~~ 111 (311)
T PF02384_consen 45 KKGDSVLDPACGSGGFLVAAMEYIKEK----RNK------IK---EINIYGIEIDPEAVALAKLNLLLHGIDNSNINIIQ 111 (311)
T ss_dssp -TTEEEEETT-TTSHHHHHHHHHHHTC----HHH------HC---CEEEEEEES-HHHHHHHHHHHHHTTHHCBGCEEEE
T ss_pred cccceeechhhhHHHHHHHHHHhhccc----ccc------cc---cceeEeecCcHHHHHHHHhhhhhhccccccccccc
Confidence 345799999999999888777655332 111 12 4588887774322111000 0111 111111222
Q ss_pred CccccccCCC-CCceeEEEecccc--c-cccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHH
Q 017702 138 PGSFHSRLFP-RSSIHFVHTSYAL--H-WLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAE 213 (367)
Q Consensus 138 p~SFy~~l~P-~~svd~~~S~~al--h-WLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~ 213 (367)
.-+|...... ...+|+++++=-+ . | ........ .-|.++ ..... ..|+ .|+.+--+
T Consensus 112 ~d~l~~~~~~~~~~~D~ii~NPPf~~~~~---~~~~~~~~--~~~~~~--~~~~~------------~~~~-~Fi~~~l~ 171 (311)
T PF02384_consen 112 GDSLENDKFIKNQKFDVIIGNPPFGSKEW---KDEELEKD--ERFKKY--FPPKS------------NAEY-AFIEHALS 171 (311)
T ss_dssp S-TTTSHSCTST--EEEEEEE--CTCES----STGGGCTT--CCCTTC--SSSTT------------EHHH-HHHHHHHH
T ss_pred cccccccccccccccccccCCCCcccccc---cccccccc--cccccc--CCCcc------------chhh-hhHHHHHh
Confidence 2244444444 6899999995211 1 3 11111100 011111 00001 1122 38888899
Q ss_pred hhccCceEEEEeec
Q 017702 214 ELVPGGLMVLILAA 227 (367)
Q Consensus 214 EL~pGG~lvl~~~g 227 (367)
-|++||++++.++.
T Consensus 172 ~Lk~~G~~~~Ilp~ 185 (311)
T PF02384_consen 172 LLKPGGRAAIILPN 185 (311)
T ss_dssp TEEEEEEEEEEEEH
T ss_pred hcccccceeEEecc
Confidence 99999999999885
|
1.1.72 from EC) from Type I and Type IC restriction systems. These enzymes are responsible for the methylation of specific DNA sequences in order to prevent the host from digesting its own genome via its restriction enzymes. These methylases have the same sequence specificity as their corresponding restriction enzymes. The type I restriction and modification system is composed of three polypeptides R, M and S. The M and S subunits together form a methyltransferase that methylates two adenine residues in complementary strands of a bipartite DNA recognition sequence. In the presence of the R subunit, the complex can also act as an endonuclease, binding to the same target sequence but cutting the DNA some distance from this site. Whether the DNA is cut or modified depends on the methylation state of the target sequence. When the target site is unmodified, the DNA is cut. When the target site is hemimethylated, the complex acts as a maintenance methyltransferase, modifying the DNA so that both strands become methylated.; GO: 0003677 DNA binding, 0008170 N-methyltransferase activity, 0006306 DNA methylation; PDB: 2F8L_A 2Y7C_C 2Y7H_C 2AR0_B 3KHK_A 3LKD_A 2OKC_B. |
| >COG3963 Phospholipid N-methyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=81.55 E-value=7.6 Score=34.85 Aligned_cols=109 Identities=17% Similarity=0.152 Sum_probs=60.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeecc--Cc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGL--PG 139 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gv--p~ 139 (367)
+..-|++||-|||..|-.+++.-+ .|. .++.+= .+-||-.....+.+..+++ -|. .-
T Consensus 48 sglpVlElGPGTGV~TkaIL~~gv---------------~~~--~L~~iE---~~~dF~~~L~~~~p~~~ii-~gda~~l 106 (194)
T COG3963 48 SGLPVLELGPGTGVITKAILSRGV---------------RPE--SLTAIE---YSPDFVCHLNQLYPGVNII-NGDAFDL 106 (194)
T ss_pred cCCeeEEEcCCccHhHHHHHhcCC---------------Ccc--ceEEEE---eCHHHHHHHHHhCCCcccc-ccchhhH
Confidence 346899999999999987763221 120 111111 2357877777665544322 111 01
Q ss_pred cccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 140 SFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
.=|--.++..-+|.++| ++--|+ .| ....-+ +|+.--.-|.+||
T Consensus 107 ~~~l~e~~gq~~D~viS--~lPll~-~P----------------------~~~~ia-----------ile~~~~rl~~gg 150 (194)
T COG3963 107 RTTLGEHKGQFFDSVIS--GLPLLN-FP----------------------MHRRIA-----------ILESLLYRLPAGG 150 (194)
T ss_pred HHHHhhcCCCeeeeEEe--cccccc-Cc----------------------HHHHHH-----------HHHHHHHhcCCCC
Confidence 11223456667888888 333333 22 222222 4444446678999
Q ss_pred eEEEEeec
Q 017702 220 LMVLILAA 227 (367)
Q Consensus 220 ~lvl~~~g 227 (367)
.++....|
T Consensus 151 ~lvqftYg 158 (194)
T COG3963 151 PLVQFTYG 158 (194)
T ss_pred eEEEEEec
Confidence 99998888
|
|
| >PRK11524 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=81.07 E-value=3.5 Score=39.60 Aligned_cols=22 Identities=14% Similarity=0.243 Sum_probs=18.6
Q ss_pred HHHHHHHHHHhhccCceEEEEe
Q 017702 204 MESFLNARAEELVPGGLMVLIL 225 (367)
Q Consensus 204 ~~~fL~~Ra~EL~pGG~lvl~~ 225 (367)
+..+|....+-|||||.|++..
T Consensus 59 l~~~l~~~~rvLK~~G~i~i~~ 80 (284)
T PRK11524 59 LYEWIDECHRVLKKQGTMYIMN 80 (284)
T ss_pred HHHHHHHHHHHhCCCcEEEEEc
Confidence 5678888889999999999864
|
|
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=80.72 E-value=4.5 Score=34.74 Aligned_cols=20 Identities=25% Similarity=0.044 Sum_probs=15.2
Q ss_pred CceEEeeecCCCCc-ccHHHH
Q 017702 62 KPFKIADLGCSVGP-NTLLAV 81 (367)
Q Consensus 62 ~~~~IaD~GCs~G~-nT~~~~ 81 (367)
+..+|+|+|||+|. .+..+.
T Consensus 16 ~~~kileIG~GfG~~vA~~L~ 36 (134)
T PRK04148 16 KNKKIVELGIGFYFKVAKKLK 36 (134)
T ss_pred cCCEEEEEEecCCHHHHHHHH
Confidence 45799999999996 555444
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 367 | ||||
| 2eg5_A | 372 | The Structure Of Xanthosine Methyltransferase Lengt | 1e-51 | ||
| 1m6e_X | 359 | Crystal Structure Of Salicylic Acid Carboxyl Methyl | 2e-50 | ||
| 2efj_A | 384 | The Structure Of 1,7 Dimethylxanthine Methyltransfe | 7e-45 | ||
| 3b5i_A | 374 | Crystal Structure Of Indole-3-Acetic Acid Methyltra | 4e-43 |
| >pdb|2EG5|A Chain A, The Structure Of Xanthosine Methyltransferase Length = 372 | Back alignment and structure |
|
| >pdb|1M6E|X Chain X, Crystal Structure Of Salicylic Acid Carboxyl Methyltransferase (Samt) Length = 359 | Back alignment and structure |
|
| >pdb|2EFJ|A Chain A, The Structure Of 1,7 Dimethylxanthine Methyltransferase Length = 384 | Back alignment and structure |
|
| >pdb|3B5I|A Chain A, Crystal Structure Of Indole-3-Acetic Acid Methyltransferase Length = 374 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana} Length = 374 | Back alignment and structure |
|---|
Score = 299 bits (766), Expect = e-100
Identities = 108/380 (28%), Positives = 174/380 (45%), Gaps = 34/380 (8%)
Query: 8 NLTEAYPMVGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIA 67
L M GG SYANNS Q + L+ E + + L + PF
Sbjct: 2 KLERLLSMKGGKGQDSYANNSLAQAMHARSMLHLLEETLENVH----LNSSASPPPFTAV 57
Query: 68 DLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP 127
DLGCS G NT+ + I++ I +F EF F +D NDFNTLF+ LP
Sbjct: 58 DLGCSSGANTVHIIDFIVKHISKRFD-----AAGIDPPEFTAFFSDLPSNDFNTLFQLLP 112
Query: 128 H---------------ARKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVD 172
R YF AG+PGSF+ RLFP +I F H++++LHWLS+VP+ + D
Sbjct: 113 PLVSNTCMEECLAADGNRSYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTD 172
Query: 173 PCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDG 232
S A+N+G + + + AY Q++ D+ FL ARA E+ GG M L+
Sbjct: 173 RRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAAEVKRGGAMFLVCLGRTSVD 232
Query: 233 IPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTI 292
+F ++DL + G+++ EK D FN+P Y + ++ + ++ NG+F I
Sbjct: 233 PTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFAI 292
Query: 293 EKMEKLSQPR---------RRITANEYASGIRAGIDGLIKKHFGDEFVDEIFNYFTTKVE 343
+K+ +AS R+ L++ H G+E +++F+ ++
Sbjct: 293 DKLVVYKGGSPLVVNEPDDASEVGRAFASSCRSVAGVLVEAHIGEELSNKLFSRVESRAT 352
Query: 344 ENYSIIEEKIRNVSNLFISL 363
+ + ++ ++ SL
Sbjct: 353 SHAKDVLVNLQFF-HIVASL 371
|
| >2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A* Length = 384 | Back alignment and structure |
|---|
Score = 293 bits (750), Expect = 3e-97
Identities = 117/392 (29%), Positives = 181/392 (46%), Gaps = 50/392 (12%)
Query: 8 NLTEAYPMVGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIA 67
L E M GG+ SYA NS+Y + K ++ + I + L + K FK+
Sbjct: 2 ELQEVLHMNGGEGDTSYAKNSSYNL-FLIRVKPVLEQCIQELLRAN---LPNINKCFKVG 57
Query: 68 DLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP 127
DLGC+ GPNT V++I+++I+ Q N ++P Q+FLND NDFN++FK LP
Sbjct: 58 DLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERP---TIQIFLNDLFQNDFNSVFKLLP 114
Query: 128 HARK------------YFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCS 175
+ +PGSF+SRLFP S+HF+H+ Y LHWLS+VP +V
Sbjct: 115 SFYRNLEKENGRKIGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELG 174
Query: 176 PAWNKGSIQCS-ESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIP 234
+ NKG I S S + +AY Q+ D +FL +EEL+ G M+L
Sbjct: 175 ISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHSEELISRGRMLLTFI-----CKE 229
Query: 235 LSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEK 294
+ ++L NDL G L EEK+DSFN+P Y + +E++ I+ G+F I
Sbjct: 230 DEFDHPNSM-DLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILY 288
Query: 295 MEKLSQP---------------------RRRITANEYASGIRAGIDGLIKKHFGDEFVDE 333
+E + P A AS +R+ + ++ HFG+ + +
Sbjct: 289 LETFNAPYDAGFSIDDDYQGRSHSPVSCDEHARAAHVASVVRSIYEPILASHFGEAILPD 348
Query: 334 IFNYFTTKVEENYSIIEEKIRNVSNLFISLKR 365
+ + + K ++ ISL +
Sbjct: 349 LSHRIAKNAAKVLR--SGKGFYD-SVIISLAK 377
|
| >1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35 Length = 359 | Back alignment and structure |
|---|
Score = 287 bits (735), Expect = 2e-95
Identities = 119/374 (31%), Positives = 186/374 (49%), Gaps = 35/374 (9%)
Query: 8 NLTEAYPMVGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIA 67
++ + M GG SYA NS QR V+ K + AI + IA
Sbjct: 2 DVRQVLHMKGGAGENSYAMNSFIQRQVISITKPITEAAITALYSGDTVT-----TRLAIA 56
Query: 68 DLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP 127
DLGCS GPN L AV +I+ +E ++ + ++ E+Q+FLND NDFN +F+SLP
Sbjct: 57 DLGCSSGPNALFAVTELIKTVEELRKK----MGRENSPEYQIFLNDLPGNDFNAIFRSLP 112
Query: 128 ----HARKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSI 183
F G+PGSF+ RLFPR+++HF+H+SY+L WLS+VP I + +
Sbjct: 113 IENDVDGVCFINGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANT- 171
Query: 184 QCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVF 243
V+ AY Q++ D FL RA+E+VPGG MVL + + +++ +
Sbjct: 172 ----CPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRSEDR--ASTECCLI 225
Query: 244 NNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLSQP-- 301
+L N + G++ EEK+D FN+P Y +P E+EA I G+F I+ +E
Sbjct: 226 WQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWS 285
Query: 302 ----------RRRITANEYASGIRAGIDGLIKKHFGDEFVDEIFNYFTTKVEENYSIIEE 351
A +RA + L+ HFG+ ++++F+ + + E S +E
Sbjct: 286 SCTKDGDGGGSVEEEGYNVARCMRAVAEPLLLDHFGEAIIEDVFHRYKLLIIERMS--KE 343
Query: 352 KIRNVSNLFISLKR 365
K + + N+ +SL R
Sbjct: 344 KTKFI-NVIVSLIR 356
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 61.0 bits (147), Expect = 2e-10
Identities = 61/423 (14%), Positives = 124/423 (29%), Gaps = 155/423 (36%)
Query: 41 LISEAIADKLDLKILGFDDTLKPFKI--ADLGCSVGPNTLLAVQNIIEAIELKFQRTTNL 98
+ + K+ FKI +L P T+L + +L +Q N
Sbjct: 166 VALDVCLSY---KVQ----CKMDFKIFWLNLKNCNSPETVLEMLQ-----KLLYQIDPNW 213
Query: 99 HQKPSALEFQVFLNDHSDND-FNTLFKSLPHAR--------------KYFAAGLPGSFHS 143
+ + L HS L KS P+ F +
Sbjct: 214 TSRSDHSS-NIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAF------NLSC 266
Query: 144 RLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKND 203
++ + T + K++ D S A + ++I + T ++
Sbjct: 267 KIL-------LTTRF---------KQVTDFLSAA--------TTTHISLDHHSMTLTPDE 302
Query: 204 MES----FLNARAEELVP-----GGLMVL-ILAAVVPDGIPLSNSYVGV----FNNILGS 249
++S +L+ R ++L P L I+A + DG+ +++ V I+ S
Sbjct: 303 VKSLLLKYLDCRPQDL-PREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIES 361
Query: 250 CFNDLA---------KMGVLSEEKVDSFNLPT-------YNATPKELEAIIRTNGNFTIE 293
N L ++ V S ++PT ++ ++ ++
Sbjct: 362 SLNVLEPAEYRKMFDRLSVFPP----SAHIPTILLSLIWFDVIKSDVMVVV--------N 409
Query: 294 KMEKLSQPRRRITANEYASGI-------RAGIDGLIKKH--------------FGDEFVD 332
K+ K S ++ E I + ++ H D
Sbjct: 410 KLHKYSLVEKQ--PKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPP 467
Query: 333 EIFNYF-------------TTKVEE------NYSIIEEKIRN----------VSNLFISL 363
+ YF ++ ++ +E+KIR+ + N L
Sbjct: 468 YLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQL 527
Query: 364 KRF 366
K +
Sbjct: 528 KFY 530
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 40.2 bits (93), Expect = 9e-04
Identities = 37/226 (16%), Positives = 67/226 (29%), Gaps = 64/226 (28%)
Query: 39 KELISEAIADKLDLKILGFDDTLKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRT--T 96
+ + +KL L K I ++ ++ +ELK +
Sbjct: 400 IKSDVMVVVNKLHKYSLVEKQP-KESTI----------SIPSIY-----LELKVKLENEY 443
Query: 97 NLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSFH---------SRLFP 147
LH+ ++ +D P+ +YF + + H LF
Sbjct: 444 ALHRS--IVDHYNIPKTFDSDDL-----IPPYLDQYFYSHI--GHHLKNIEHPERMTLFR 494
Query: 148 RSSIHFVHTSYALHWL-SKVPKEIVDPCSPAWN-KGSIQCSESNIEVVRAYST------- 198
+ F +L K+ + S AWN GSI + ++ + Y
Sbjct: 495 MVFLDF-------RFLEQKIRHD-----STAWNASGSILNTLQQLKFYKPYICDNDPKYE 542
Query: 199 QYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFN 244
+ N + FL E L+ L+ A L +F
Sbjct: 543 RLVNAILDFLPKIEENLICSKYTDLLRIA-------LMAEDEAIFE 581
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 367 | |||
| 3b5i_A | 374 | S-adenosyl-L-methionine:salicylic acid carboxyl me | 100.0 | |
| 1m6e_X | 359 | S-adenosyl-L-methionnine:salicylic acid carboxyl m | 100.0 | |
| 2efj_A | 384 | 3,7-dimethylxanthine methyltransferase; SAM-depend | 100.0 | |
| 3ccf_A | 279 | Cyclopropane-fatty-acyl-phospholipid synthase; YP_ | 99.69 | |
| 2p35_A | 259 | Trans-aconitate 2-methyltransferase; SAM dependent | 99.63 | |
| 2yqz_A | 263 | Hypothetical protein TTHA0223; RNA methyltransfera | 99.55 | |
| 3bus_A | 273 | REBM, methyltransferase; rebeccamycin synthesis; H | 99.3 | |
| 3dtn_A | 234 | Putative methyltransferase MM_2633; structural gen | 99.28 | |
| 1vl5_A | 260 | Unknown conserved protein BH2331; putative methylt | 99.26 | |
| 1xxl_A | 239 | YCGJ protein; structural genomics, protein structu | 99.26 | |
| 3hem_A | 302 | Cyclopropane-fatty-acyl-phospholipid synthase 2; p | 99.19 | |
| 3ujc_A | 266 | Phosphoethanolamine N-methyltransferase; parasite; | 99.19 | |
| 3mgg_A | 276 | Methyltransferase; NYSGXRC, PSI-II, protein struct | 99.14 | |
| 2o57_A | 297 | Putative sarcosine dimethylglycine methyltransfera | 99.13 | |
| 3hnr_A | 220 | Probable methyltransferase BT9727_4108; structural | 99.13 | |
| 3lcc_A | 235 | Putative methyl chloride transferase; halide methy | 99.1 | |
| 3ege_A | 261 | Putative methyltransferase from antibiotic biosyn | 99.08 | |
| 3f4k_A | 257 | Putative methyltransferase; structural genomics, P | 99.08 | |
| 1kpg_A | 287 | CFA synthase;, cyclopropane-fatty-acyl-phospholipi | 99.07 | |
| 3dli_A | 240 | Methyltransferase; PSI-II, NYSGXRC, structural gen | 99.06 | |
| 4htf_A | 285 | S-adenosylmethionine-dependent methyltransferase; | 99.05 | |
| 2aot_A | 292 | HMT, histamine N-methyltransferase; classic methyl | 99.05 | |
| 3g5l_A | 253 | Putative S-adenosylmethionine dependent methyltran | 99.05 | |
| 3kkz_A | 267 | Uncharacterized protein Q5LES9; putative methyltra | 99.04 | |
| 2p7i_A | 250 | Hypothetical protein; putative methyltransferase, | 99.04 | |
| 3sm3_A | 235 | SAM-dependent methyltransferases; NESG, structural | 99.03 | |
| 3h2b_A | 203 | SAM-dependent methyltransferase; alpha-beta protei | 99.03 | |
| 4gek_A | 261 | TRNA (CMO5U34)-methyltransferase; structural genom | 99.02 | |
| 3l8d_A | 242 | Methyltransferase; structural genomics, PSI, nysgr | 99.01 | |
| 3ou2_A | 218 | SAM-dependent methyltransferase; O-methyltransfera | 99.01 | |
| 3dh0_A | 219 | SAM dependent methyltransferase; cystal structure, | 99.01 | |
| 1xtp_A | 254 | LMAJ004091AAA; SGPP, structural genomics, PSI, pro | 98.99 | |
| 3e23_A | 211 | Uncharacterized protein RPA2492; alpha-beta protei | 98.98 | |
| 1nkv_A | 256 | Hypothetical protein YJHP; structural genomics, PS | 98.97 | |
| 3e8s_A | 227 | Putative SAM dependent methyltransferase; NP_74470 | 98.97 | |
| 4hg2_A | 257 | Methyltransferase type 11; structural genomics, PS | 98.96 | |
| 3bkx_A | 275 | SAM-dependent methyltransferase; YP_807781.1, cycl | 98.95 | |
| 3dlc_A | 219 | Putative S-adenosyl-L-methionine-dependent methylt | 98.94 | |
| 2a14_A | 263 | Indolethylamine N-methyltransferase; SGC,INMT, str | 98.94 | |
| 3vc1_A | 312 | Geranyl diphosphate 2-C-methyltransferase; rossman | 98.92 | |
| 4e2x_A | 416 | TCAB9; kijanose, tetronitrose, tetradeoxy sugar, s | 98.92 | |
| 3cc8_A | 230 | Putative methyltransferase; structural genomics, j | 98.92 | |
| 1pjz_A | 203 | Thiopurine S-methyltransferase; polymorphism, S-ad | 98.9 | |
| 2g72_A | 289 | Phenylethanolamine N-methyltransferase; HET: SAM F | 98.9 | |
| 2fk8_A | 318 | Methoxy mycolic acid synthase 4; S-adenosylmethion | 98.89 | |
| 4fsd_A | 383 | Arsenic methyltransferase; rossmann fold; 1.75A {C | 98.87 | |
| 3lst_A | 348 | CALO1 methyltransferase; calicheamicin, enediyne, | 98.87 | |
| 2gb4_A | 252 | Thiopurine S-methyltransferase; 18204406, thiopuri | 98.86 | |
| 3bkw_A | 243 | MLL3908 protein, S-adenosylmethionine dependent me | 98.86 | |
| 2ex4_A | 241 | Adrenal gland protein AD-003; methyltransferase, s | 98.86 | |
| 3bgv_A | 313 | MRNA CAP guanine-N7 methyltransferase; alternative | 98.84 | |
| 1vlm_A | 219 | SAM-dependent methyltransferase; possible histamin | 98.84 | |
| 1ri5_A | 298 | MRNA capping enzyme; methyltransferase, M7G, messe | 98.84 | |
| 3mcz_A | 352 | O-methyltransferase; adomet_mtases, S-adenosylmeth | 98.83 | |
| 3ocj_A | 305 | Putative exported protein; structural genomics, PS | 98.83 | |
| 3i53_A | 332 | O-methyltransferase; CO-complex, rossmann-like fol | 98.81 | |
| 3gwz_A | 369 | MMCR; methyltransferase, mitomycin, S-adenosyl met | 98.81 | |
| 3pfg_A | 263 | N-methyltransferase; N,N-dimethyltransferase, SAM | 98.81 | |
| 1y8c_A | 246 | S-adenosylmethionine-dependent methyltransferase; | 98.79 | |
| 3reo_A | 368 | (ISO)eugenol O-methyltransferase; directed evoluti | 98.79 | |
| 3g5t_A | 299 | Trans-aconitate 3-methyltransferase; structural ge | 98.79 | |
| 3g2m_A | 299 | PCZA361.24; SAM-dependent methyltransferase, glyco | 98.78 | |
| 2qe6_A | 274 | Uncharacterized protein TFU_2867; putative methylt | 98.77 | |
| 3p9c_A | 364 | Caffeic acid O-methyltransferase; S-adenosylmethio | 98.77 | |
| 2kw5_A | 202 | SLR1183 protein; structural genomics, northeast st | 98.76 | |
| 3i9f_A | 170 | Putative type 11 methyltransferase; structural gen | 98.76 | |
| 4a6d_A | 353 | Hydroxyindole O-methyltransferase; melatonin, circ | 98.75 | |
| 2vdw_A | 302 | Vaccinia virus capping enzyme D1 subunit; nucleoti | 98.75 | |
| 3gu3_A | 284 | Methyltransferase; alpha-beta protein, structural | 98.75 | |
| 3giw_A | 277 | Protein of unknown function DUF574; rossmann-fold | 98.74 | |
| 2r3s_A | 335 | Uncharacterized protein; methyltransferase domain, | 98.71 | |
| 2i62_A | 265 | Nicotinamide N-methyltransferase; structural genom | 98.7 | |
| 2ip2_A | 334 | Probable phenazine-specific methyltransferase; pyo | 98.7 | |
| 3dp7_A | 363 | SAM-dependent methyltransferase; structural genomi | 98.69 | |
| 3thr_A | 293 | Glycine N-methyltransferase; GNMT, folate, methylt | 98.68 | |
| 3g07_A | 292 | 7SK snRNA methylphosphate capping enzyme; structur | 98.68 | |
| 3ofk_A | 216 | Nodulation protein S; NODS, N-methyltransferase, S | 98.67 | |
| 3bxo_A | 239 | N,N-dimethyltransferase; desosamine, sugar, carboh | 98.67 | |
| 1fp1_D | 372 | Isoliquiritigenin 2'-O-methyltransferase; protein- | 98.64 | |
| 1qzz_A | 374 | RDMB, aclacinomycin-10-hydroxylase; anthracycline, | 98.64 | |
| 2ld4_A | 176 | Anamorsin; methyltransferase-like fold, alpha/beta | 98.63 | |
| 3jwg_A | 219 | HEN1, methyltransferase type 12; 1.90A {Clostridiu | 98.62 | |
| 3ggd_A | 245 | SAM-dependent methyltransferase; YP_325210.1, stru | 98.59 | |
| 3cgg_A | 195 | SAM-dependent methyltransferase; NP_600671.1, meth | 98.58 | |
| 1ve3_A | 227 | Hypothetical protein PH0226; dimer, riken structur | 98.58 | |
| 3jwh_A | 217 | HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena | 98.58 | |
| 2xvm_A | 199 | Tellurite resistance protein TEHB; antibiotic resi | 98.58 | |
| 2gs9_A | 211 | Hypothetical protein TT1324; methyl transferase, s | 98.58 | |
| 3d2l_A | 243 | SAM-dependent methyltransferase; ZP_00538691.1, st | 98.57 | |
| 1x19_A | 359 | CRTF-related protein; methyltransferase, bacterioc | 98.54 | |
| 2zfu_A | 215 | Nucleomethylin, cerebral protein 1; nucleolar prot | 98.54 | |
| 3q87_B | 170 | N6 adenine specific DNA methylase; SAM-methyltrans | 98.53 | |
| 1tw3_A | 360 | COMT, carminomycin 4-O-methyltransferase; anthracy | 98.52 | |
| 3m70_A | 286 | Tellurite resistance protein TEHB homolog; structu | 98.51 | |
| 1zg3_A | 358 | Isoflavanone 4'-O-methyltransferase; rossman fold, | 98.47 | |
| 1fp2_A | 352 | Isoflavone O-methyltransferase; protein-product co | 98.45 | |
| 2p8j_A | 209 | S-adenosylmethionine-dependent methyltransferase; | 98.4 | |
| 3mq2_A | 218 | 16S rRNA methyltransferase; methyltranferase, ribo | 98.4 | |
| 1yzh_A | 214 | TRNA (guanine-N(7)-)-methyltransferase; alpha-beta | 98.39 | |
| 4df3_A | 233 | Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; | 98.35 | |
| 2avn_A | 260 | Ubiquinone/menaquinone biosynthesis methyltransfe | 98.28 | |
| 3dxy_A | 218 | TRNA (guanine-N(7)-)-methyltransferase; rossmann f | 98.28 | |
| 3opn_A | 232 | Putative hemolysin; structural genomics, PSI-2, pr | 98.27 | |
| 1wzn_A | 252 | SAM-dependent methyltransferase; structural genomi | 98.24 | |
| 3grz_A | 205 | L11 mtase, ribosomal protein L11 methyltransferase | 98.23 | |
| 3iv6_A | 261 | Putative Zn-dependent alcohol dehydrogenase; alpha | 98.21 | |
| 1ej0_A | 180 | FTSJ; methyltransferase, adoMet, adenosyl methioni | 98.21 | |
| 3q7e_A | 349 | Protein arginine N-methyltransferase 1; HET: SAH; | 98.17 | |
| 3hm2_A | 178 | Precorrin-6Y C5,15-methyltransferase; alpha-beta-s | 98.14 | |
| 2plw_A | 201 | Ribosomal RNA methyltransferase, putative; malaria | 98.13 | |
| 3p9n_A | 189 | Possible methyltransferase (methylase); RV2966C, a | 98.13 | |
| 2fca_A | 213 | TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bac | 98.11 | |
| 3dmg_A | 381 | Probable ribosomal RNA small subunit methyltransf; | 98.1 | |
| 3mti_A | 185 | RRNA methylase; SAM-dependent, PSI, MCSG, structur | 98.08 | |
| 2nxc_A | 254 | L11 mtase, ribosomal protein L11 methyltransferase | 98.07 | |
| 3eey_A | 197 | Putative rRNA methylase; rRNA methylation, S-adeno | 98.06 | |
| 2pxx_A | 215 | Uncharacterized protein MGC2408; structural genomi | 98.05 | |
| 1dus_A | 194 | MJ0882; hypothetical protein, methanococcus jannas | 98.04 | |
| 3hp7_A | 291 | Hemolysin, putative; structural genomics, APC64019 | 98.03 | |
| 3r0q_C | 376 | Probable protein arginine N-methyltransferase 4.2; | 98.02 | |
| 3lbf_A | 210 | Protein-L-isoaspartate O-methyltransferase; modifi | 98.02 | |
| 2fyt_A | 340 | Protein arginine N-methyltransferase 3; structural | 98.0 | |
| 3e05_A | 204 | Precorrin-6Y C5,15-methyltransferase (decarboxyla; | 97.99 | |
| 4hc4_A | 376 | Protein arginine N-methyltransferase 6; HRMT1L6, S | 97.98 | |
| 1xdz_A | 240 | Methyltransferase GIDB; MCSG, protein structure in | 97.97 | |
| 1nt2_A | 210 | Fibrillarin-like PRE-rRNA processing protein; adeM | 97.96 | |
| 3m33_A | 226 | Uncharacterized protein; structural genomics, PSI- | 97.95 | |
| 1zx0_A | 236 | Guanidinoacetate N-methyltransferase; structural g | 97.95 | |
| 3ckk_A | 235 | TRNA (guanine-N(7)-)-methyltransferase; mettl1, S- | 97.93 | |
| 3evz_A | 230 | Methyltransferase; NYSGXRC, NEW YORK SGX research | 97.93 | |
| 2yxe_A | 215 | Protein-L-isoaspartate O-methyltransferase; rossma | 97.91 | |
| 3orh_A | 236 | Guanidinoacetate N-methyltransferase; structura ge | 97.9 | |
| 3p2e_A | 225 | 16S rRNA methylase; methyltransferase, transferase | 97.9 | |
| 3mb5_A | 255 | SAM-dependent methyltransferase; RNA methyltransfe | 97.89 | |
| 2ipx_A | 233 | RRNA 2'-O-methyltransferase fibrillarin; FBL, stru | 97.87 | |
| 1fbn_A | 230 | MJ fibrillarin homologue; MJ proteins, ribosomal R | 97.87 | |
| 1g6q_1 | 328 | HnRNP arginine N-methyltransferase; SAM-binding do | 97.86 | |
| 2nyu_A | 196 | Putative ribosomal RNA methyltransferase 2; SAM, s | 97.86 | |
| 1i9g_A | 280 | Hypothetical protein RV2118C; mtase, adoMet, cryst | 97.86 | |
| 3lpm_A | 259 | Putative methyltransferase; structural genomics, p | 97.85 | |
| 2b25_A | 336 | Hypothetical protein; structural genomics, methyl | 97.85 | |
| 1vbf_A | 231 | 231AA long hypothetical protein-L-isoaspartate O- | 97.84 | |
| 4dcm_A | 375 | Ribosomal RNA large subunit methyltransferase G; 2 | 97.82 | |
| 3id6_C | 232 | Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; | 97.81 | |
| 3gjy_A | 317 | Spermidine synthase; APC62791, structural genomics | 97.8 | |
| 1af7_A | 274 | Chemotaxis receptor methyltransferase CHER; chemot | 97.79 | |
| 3uwp_A | 438 | Histone-lysine N-methyltransferase, H3 lysine-79; | 97.77 | |
| 3fzg_A | 200 | 16S rRNA methylase; methyltransferase, plasmid, tr | 97.77 | |
| 2pjd_A | 343 | Ribosomal RNA small subunit methyltransferase C; g | 97.76 | |
| 2ozv_A | 260 | Hypothetical protein ATU0636; structural genomics, | 97.76 | |
| 1g8a_A | 227 | Fibrillarin-like PRE-rRNA processing protein; rRNA | 97.75 | |
| 1yb2_A | 275 | Hypothetical protein TA0852; structural genomics, | 97.74 | |
| 3sso_A | 419 | Methyltransferase; macrolide, natural product, ros | 97.73 | |
| 3adn_A | 294 | Spermidine synthase; aminopropyltransferase, polya | 97.72 | |
| 2yxd_A | 183 | Probable cobalt-precorrin-6Y C(15)-methyltransfer | 97.72 | |
| 1p91_A | 269 | Ribosomal RNA large subunit methyltransferase A; R | 97.72 | |
| 1l3i_A | 192 | Precorrin-6Y methyltransferase/putative decarboxyl | 97.71 | |
| 3g89_A | 249 | Ribosomal RNA small subunit methyltransferase G; 1 | 97.7 | |
| 4dzr_A | 215 | Protein-(glutamine-N5) methyltransferase, release | 97.68 | |
| 2ift_A | 201 | Putative methylase HI0767; NESG, Y767_haein, struc | 97.67 | |
| 1jsx_A | 207 | Glucose-inhibited division protein B; methyltransf | 97.66 | |
| 3u81_A | 221 | Catechol O-methyltransferase; neurotransmitter deg | 97.65 | |
| 2pbf_A | 227 | Protein-L-isoaspartate O-methyltransferase beta-A | 97.64 | |
| 1dl5_A | 317 | Protein-L-isoaspartate O-methyltransferase; isoasp | 97.64 | |
| 1o9g_A | 250 | RRNA methyltransferase; antibiotic resistance, Se- | 97.63 | |
| 1o54_A | 277 | SAM-dependent O-methyltransferase; TM0748, structu | 97.61 | |
| 2pwy_A | 258 | TRNA (adenine-N(1)-)-methyltransferase; mtase, ado | 97.6 | |
| 3njr_A | 204 | Precorrin-6Y methylase; methyltransferase, decarbo | 97.59 | |
| 2b3t_A | 276 | Protein methyltransferase HEMK; translation termin | 97.58 | |
| 2frn_A | 278 | Hypothetical protein PH0793; structural genomics, | 97.56 | |
| 1i1n_A | 226 | Protein-L-isoaspartate O-methyltransferase; S-aden | 97.56 | |
| 1jg1_A | 235 | PIMT;, protein-L-isoaspartate O-methyltransferase; | 97.54 | |
| 2y1w_A | 348 | Histone-arginine methyltransferase CARM1; histone | 97.54 | |
| 3bwc_A | 304 | Spermidine synthase; SAM, SGPP, structura genomics | 97.53 | |
| 2vdv_E | 246 | TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl | 97.51 | |
| 3dr5_A | 221 | Putative O-methyltransferase; Q8NRD3, CGL1119, PF0 | 97.51 | |
| 2esr_A | 177 | Methyltransferase; structural genomics, hypothetic | 97.5 | |
| 1uir_A | 314 | Polyamine aminopropyltransferase; spermidien synth | 97.49 | |
| 3fpf_A | 298 | Mtnas, putative uncharacterized protein; thermonic | 97.49 | |
| 1r18_A | 227 | Protein-L-isoaspartate(D-aspartate)-O-methyltrans; | 97.49 | |
| 3tfw_A | 248 | Putative O-methyltransferase; PSI-biology, nysgrc, | 97.48 | |
| 1u2z_A | 433 | Histone-lysine N-methyltransferase, H3 lysine-79 s | 97.47 | |
| 2fpo_A | 202 | Methylase YHHF; structural genomics, putative meth | 97.47 | |
| 3bzb_A | 281 | Uncharacterized protein; RED ALGA, protein structu | 97.46 | |
| 2xyq_A | 290 | Putative 2'-O-methyl transferase; transferase-vira | 97.43 | |
| 2gpy_A | 233 | O-methyltransferase; structural genomics, PSI, pro | 97.42 | |
| 1ws6_A | 171 | Methyltransferase; structural genomics, riken stru | 97.41 | |
| 2fhp_A | 187 | Methylase, putative; alpha-beta-alpha sandwich, st | 97.4 | |
| 1ixk_A | 315 | Methyltransferase; open beta sheet; 1.90A {Pyrococ | 97.38 | |
| 3htx_A | 950 | HEN1; HEN1, small RNA methyltransferase, protein-R | 97.36 | |
| 3dou_A | 191 | Ribosomal RNA large subunit methyltransferase J; c | 97.33 | |
| 1inl_A | 296 | Spermidine synthase; beta-barrel, rossman fold, st | 97.31 | |
| 3ntv_A | 232 | MW1564 protein; rossmann fold, putative methyltran | 97.31 | |
| 3gdh_A | 241 | Trimethylguanosine synthase homolog; M7G, CAP, dim | 97.3 | |
| 2h00_A | 254 | Methyltransferase 10 domain containing protein; st | 97.26 | |
| 1iy9_A | 275 | Spermidine synthase; rossmann fold, structural gen | 97.24 | |
| 3duw_A | 223 | OMT, O-methyltransferase, putative; alternating of | 97.24 | |
| 3r3h_A | 242 | O-methyltransferase, SAM-dependent; structural gen | 97.24 | |
| 2hnk_A | 239 | SAM-dependent O-methyltransferase; modified rossma | 97.24 | |
| 1mjf_A | 281 | Spermidine synthase; spermidine synthetase, struct | 97.21 | |
| 3ajd_A | 274 | Putative methyltransferase MJ0026; tRNA, M5C, ross | 97.18 | |
| 3tr6_A | 225 | O-methyltransferase; cellular processes; HET: SAH; | 97.17 | |
| 1sui_A | 247 | Caffeoyl-COA O-methyltransferase; rossmann fold, p | 97.15 | |
| 2bm8_A | 236 | Cephalosporin hydroxylase CMCI; cephamycin biosynt | 97.12 | |
| 2ih2_A | 421 | Modification methylase TAQI; DNA, DNA methyltransf | 97.12 | |
| 3lec_A | 230 | NADB-rossmann superfamily protein; PSI, MCSG, stru | 97.12 | |
| 3tma_A | 354 | Methyltransferase; thump domain; 2.05A {Thermus th | 97.11 | |
| 2i7c_A | 283 | Spermidine synthase; transferase, structural genom | 97.11 | |
| 1sqg_A | 429 | SUN protein, FMU protein; rossmann-fold, mixed bet | 97.09 | |
| 2b2c_A | 314 | Spermidine synthase; beta-alpha, transferase; 2.50 | 97.09 | |
| 3kr9_A | 225 | SAM-dependent methyltransferase; class I rossmann- | 97.08 | |
| 2yxl_A | 450 | PH0851 protein, 450AA long hypothetical FMU protei | 97.07 | |
| 2o07_A | 304 | Spermidine synthase; structural genomics, structur | 97.07 | |
| 1xj5_A | 334 | Spermidine synthase 1; structural genomics, protei | 97.06 | |
| 2p41_A | 305 | Type II methyltransferase; vizier, viral enzymes i | 97.06 | |
| 2frx_A | 479 | Hypothetical protein YEBU; rossmann-type S-adenosy | 97.05 | |
| 3c3y_A | 237 | Pfomt, O-methyltransferase; plant secondary metabo | 97.05 | |
| 2pt6_A | 321 | Spermidine synthase; transferase, structural genom | 96.99 | |
| 3gnl_A | 244 | Uncharacterized protein, DUF633, LMOF2365_1472; st | 96.94 | |
| 3m6w_A | 464 | RRNA methylase; rRNA methyltransferase, 5-methylcy | 96.93 | |
| 2avd_A | 229 | Catechol-O-methyltransferase; structural genomics, | 96.92 | |
| 3a27_A | 272 | TYW2, uncharacterized protein MJ1557; wybutosine m | 96.91 | |
| 3lcv_B | 281 | Sisomicin-gentamicin resistance methylase SGM; ant | 96.91 | |
| 2oxt_A | 265 | Nucleoside-2'-O-methyltransferase; flavivirus, vir | 96.9 | |
| 2wa2_A | 276 | Non-structural protein 5; transferase, S-adenosyl- | 96.9 | |
| 2yvl_A | 248 | TRMI protein, hypothetical protein; tRNA, methyltr | 96.88 | |
| 3cbg_A | 232 | O-methyltransferase; cyanobacterium; HET: SAH FER | 96.88 | |
| 3b3j_A | 480 | Histone-arginine methyltransferase CARM1; protein | 96.87 | |
| 2igt_A | 332 | SAM dependent methyltransferase; alpha-beta sandwi | 96.87 | |
| 3c3p_A | 210 | Methyltransferase; NP_951602.1, structural genomic | 96.71 | |
| 3m4x_A | 456 | NOL1/NOP2/SUN family protein; mtase domain, PUA do | 96.65 | |
| 4dmg_A | 393 | Putative uncharacterized protein TTHA1493; rRNA, m | 96.65 | |
| 2f8l_A | 344 | Hypothetical protein LMO1582; structural genomics, | 96.6 | |
| 3frh_A | 253 | 16S rRNA methylase; methyltransferase domain, heli | 96.58 | |
| 1wxx_A | 382 | TT1595, hypothetical protein TTHA1280; thermus the | 96.55 | |
| 4gqb_A | 637 | Protein arginine N-methyltransferase 5; TIM barrel | 96.48 | |
| 1nv8_A | 284 | HEMK protein; class I adoMet-dependent methyltrans | 96.26 | |
| 2cmg_A | 262 | Spermidine synthase; transferase, putrescine amino | 96.25 | |
| 1ne2_A | 200 | Hypothetical protein TA1320; structural genomics, | 96.18 | |
| 1wy7_A | 207 | Hypothetical protein PH1948; seven-stranded beta s | 95.99 | |
| 2b78_A | 385 | Hypothetical protein SMU.776; structure genomics, | 95.9 | |
| 3gru_A | 295 | Dimethyladenosine transferase; rossman fold, ribos | 95.79 | |
| 3k6r_A | 278 | Putative transferase PH0793; structural genomics, | 95.75 | |
| 1zq9_A | 285 | Probable dimethyladenosine transferase; SGC, struc | 95.65 | |
| 3v97_A | 703 | Ribosomal RNA large subunit methyltransferase L; Y | 95.56 | |
| 2as0_A | 396 | Hypothetical protein PH1915; RNA methyltransferase | 95.55 | |
| 3tqs_A | 255 | Ribosomal RNA small subunit methyltransferase A; p | 95.23 | |
| 2yx1_A | 336 | Hypothetical protein MJ0883; methyl transferase, t | 95.08 | |
| 2h1r_A | 299 | Dimethyladenosine transferase, putative; SGC toron | 95.05 | |
| 2qm3_A | 373 | Predicted methyltransferase; putative methyltransf | 94.93 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 94.87 | |
| 3khk_A | 544 | Type I restriction-modification system methylation | 94.82 | |
| 3c0k_A | 396 | UPF0064 protein YCCW; PUA domain, adoMet dependent | 94.81 | |
| 3axs_A | 392 | Probable N(2),N(2)-dimethylguanosine tRNA methylt | 94.47 | |
| 3evf_A | 277 | RNA-directed RNA polymerase NS5; NS5 methyltransfe | 94.4 | |
| 2dul_A | 378 | N(2),N(2)-dimethylguanosine tRNA methyltransferas; | 94.3 | |
| 2okc_A | 445 | Type I restriction enzyme stysji M protein; NP_813 | 94.26 | |
| 3fut_A | 271 | Dimethyladenosine transferase; methyltransferase, | 94.22 | |
| 1uwv_A | 433 | 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA m | 94.15 | |
| 1qam_A | 244 | ERMC' methyltransferase; rRNA methyltransferase ER | 93.87 | |
| 2qfm_A | 364 | Spermine synthase; spermidine aminopropyltransfera | 93.84 | |
| 3tm4_A | 373 | TRNA (guanine N2-)-methyltransferase TRM14; rossma | 93.8 | |
| 2b9e_A | 309 | NOL1/NOP2/SUN domain family, member 5 isoform 2; m | 93.2 | |
| 3s1s_A | 878 | Restriction endonuclease bpusi; PD--(D/E)XK cataly | 92.95 | |
| 2jjq_A | 425 | Uncharacterized RNA methyltransferase pyrab10780; | 92.39 | |
| 3lkd_A | 542 | Type I restriction-modification system methyltrans | 92.37 | |
| 3gcz_A | 282 | Polyprotein; flavivirus, RNA capping, methyltransf | 91.98 | |
| 3eld_A | 300 | Methyltransferase; flavivirus, RNA capping, guanyl | 91.04 | |
| 3uzu_A | 279 | Ribosomal RNA small subunit methyltransferase A; s | 91.02 | |
| 1qyr_A | 252 | KSGA, high level kasugamycin resistance protein, S | 90.55 | |
| 3k0b_A | 393 | Predicted N6-adenine-specific DNA methylase; methy | 90.47 | |
| 1yub_A | 245 | Ermam, rRNA methyltransferase; MLS antibiotics; NM | 90.41 | |
| 2ar0_A | 541 | M.ecoki, type I restriction enzyme ecoki M protein | 89.96 | |
| 3o4f_A | 294 | Spermidine synthase; aminopropyltransferase, polya | 89.13 | |
| 3r24_A | 344 | NSP16, 2'-O-methyl transferase; methyltransferase, | 89.0 | |
| 3ldu_A | 385 | Putative methylase; structural genomics, PSI-2, pr | 88.64 | |
| 3ftd_A | 249 | Dimethyladenosine transferase; KSGA, rossmann-like | 87.91 | |
| 2zig_A | 297 | TTHA0409, putative modification methylase; methylt | 87.08 | |
| 3ldg_A | 384 | Putative uncharacterized protein SMU.472; YPSC, me | 85.85 | |
| 3ua3_A | 745 | Protein arginine N-methyltransferase 5; TIM-barrel | 84.45 | |
| 2qy6_A | 257 | UPF0209 protein YFCK; structural genomics, unknown | 81.17 |
| >3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-88 Score=671.63 Aligned_cols=347 Identities=31% Similarity=0.555 Sum_probs=292.2
Q ss_pred CCccceecccCCCCCchHHHhhHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCceEEeeecCCCCcccHHHHHHHHH
Q 017702 7 NNLTEAYPMVGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIADLGCSVGPNTLLAVQNIIE 86 (367)
Q Consensus 7 ~~~~~~~~M~gg~g~~sY~~nS~~Q~~~~~~~~~ll~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~nT~~~~~~ii~ 86 (367)
|+++++++|+||+|++||++||..|++++..++|+++++|++ +.+... ..+++++|||||||+|+||+.+++.||+
T Consensus 1 m~~~~~~~m~gg~g~~sY~~nS~~Q~~~~~~~~~~~~~ai~~-l~~~~~---~~~~~~~IaDlGCssG~Nt~~~v~~ii~ 76 (374)
T 3b5i_A 1 MKLERLLSMKGGKGQDSYANNSLAQAMHARSMLHLLEETLEN-VHLNSS---ASPPPFTAVDLGCSSGANTVHIIDFIVK 76 (374)
T ss_dssp -------------------------CTTHHHHHHHHHHHHHT-SCCCCS---SSCCCEEEEEETCCSSHHHHHHHHHHHH
T ss_pred CCcccccCCCCCCCcchHHHhhHHHHHHHHHHHHHHHHHHHH-hhcccc---CCCCceEEEecCCCCChhHHHHHHHHHH
Confidence 678999999999999999999999999999999999999987 433311 0246899999999999999999999999
Q ss_pred HHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCcc---------------ccceeeccCccccccCCCCCce
Q 017702 87 AIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHA---------------RKYFAAGLPGSFHSRLFPRSSI 151 (367)
Q Consensus 87 ~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~---------------~~~f~~gvp~SFy~~l~P~~sv 151 (367)
+|++++.+.+.+ +| +|||+|||||.||||+||++|+.. ++||++|||||||+|+||++|+
T Consensus 77 ~i~~~~~~~~~~--~p---e~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~f~~gvpgSFy~rlfP~~S~ 151 (374)
T 3b5i_A 77 HISKRFDAAGID--PP---EFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSYFVAGVPGSFYRRLFPARTI 151 (374)
T ss_dssp HHHHHHHHTTCC--CC---CEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCSEEEEEESCTTSCCSCTTCE
T ss_pred HHHHHHhhcCCC--CC---ceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCceEEEecChhhhcccCCCcce
Confidence 999999775433 57 999999999999999999999863 4599999999999999999999
Q ss_pred eEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEEEEeecccCC
Q 017702 152 HFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPD 231 (367)
Q Consensus 152 d~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g~~~n 231 (367)
|++||++||||||++|+.+.++.+++||||+||+++++|+|.++|++||++||..||++|++||||||+||++++| +++
T Consensus 152 d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~~~g-r~~ 230 (374)
T 3b5i_A 152 DFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAAEVKRGGAMFLVCLG-RTS 230 (374)
T ss_dssp EEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEE-CCC
T ss_pred EEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEec-CCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999 988
Q ss_pred CCCCCCCchhhHH-HHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEEecCCCCC-----
Q 017702 232 GIPLSNSYVGVFN-NILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLSQPRRRI----- 305 (367)
Q Consensus 232 ~~~~~~~~~~~~~-~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~~~p~~~~----- 305 (367)
..+.++.+.+.+| +.|.++|++|+.+|+++++++++|++|+|+||++||+++|+++|+|+|+++|.++.++++.
T Consensus 231 ~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~~F~I~~le~~~~~~~~~~~~~~ 310 (374)
T 3b5i_A 231 VDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFAIDKLVVYKGGSPLVVNEPD 310 (374)
T ss_dssp SSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHCSEEEEEEEEEECCCCCCCSSTT
T ss_pred CccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHHHHHHHHHhcCCcEEEEEEEEeecCCccccccc
Confidence 7666666677888 9999999999999999999999999999999999999999987789999999998774321
Q ss_pred ----CHHHHHHhHHhhhhhhhhhccCHHHHHHHHHHHHHHHHhhhhHHHHhcCC--eEEEEEEEE
Q 017702 306 ----TANEYASGIRAGIDGLIKKHFGDEFVDEIFNYFTTKVEENYSIIEEKIRN--VSNLFISLK 364 (367)
Q Consensus 306 ----~~~~v~~~iRa~~~~~l~~~~~~~~~de~f~ry~~~~~~~~~~~~~~~~~--~~~~~~~l~ 364 (367)
.++.+++++||+.+|++.+|||++++|++|+||+++++++++++. ++.+ .++++|+|+
T Consensus 311 ~~~~~g~~~a~~~Ra~~e~ll~~hfg~~i~d~lf~ry~~~~~~~~~~~~-~~~~~~~~~~~~~l~ 374 (374)
T 3b5i_A 311 DASEVGRAFASSCRSVAGVLVEAHIGEELSNKLFSRVESRATSHAKDVL-VNLQFFHIVASLSFT 374 (374)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTCHHHH-TTCCCEEEEEEEEEC
T ss_pred hhHHHHHHHHHHHHHhccchhHhhccHHHHHHHHHHHHHHHHHhHHHhh-hccccceEEEEEEeC
Confidence 247899999999999999999999999999999999999999775 4556 899999985
|
| >1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-89 Score=673.57 Aligned_cols=340 Identities=36% Similarity=0.603 Sum_probs=307.9
Q ss_pred CCccceecccCCCCCchHHHhhHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCceEEeeecCCCCcccHHHHHHHHH
Q 017702 7 NNLTEAYPMVGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIADLGCSVGPNTLLAVQNIIE 86 (367)
Q Consensus 7 ~~~~~~~~M~gg~g~~sY~~nS~~Q~~~~~~~~~ll~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~nT~~~~~~ii~ 86 (367)
|++++++||+||+|++||++||.+|++++..++|++++||.+++. ... .+++++|||||||+|+||+.+++.||+
T Consensus 1 m~~~~~~~m~gg~G~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~-~~~----~~~~~~IaDlGCs~G~Nt~~~v~~ii~ 75 (359)
T 1m6e_X 1 MDVRQVLHMKGGAGENSYAMNSFIQRQVISITKPITEAAITALYS-GDT----VTTRLAIADLGCSSGPNALFAVTELIK 75 (359)
T ss_dssp CCCHHHHCCCCCTTSTTTTSSCHHHHHHHHHTHHHHHHHHHHHHS-SSS----SSSEECCEEESCCSSTTTTTGGGTTHH
T ss_pred CCcccccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccC----CCCceEEEecCCCCCcchHHHHHHHHH
Confidence 788999999999999999999999999999999999999998553 210 356899999999999999999999999
Q ss_pred HHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc----cccceeeccCccccccCCCCCceeEEEecccccc
Q 017702 87 AIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH----ARKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHW 162 (367)
Q Consensus 87 ~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~----~~~~f~~gvp~SFy~~l~P~~svd~~~S~~alhW 162 (367)
+|+++|.+.+. +++| ||||+|||||.||||+||++|+. .++||++|||||||+||||++|+|++||++||||
T Consensus 76 ~i~~~~~~~~~-~~~p---e~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHW 151 (359)
T 1m6e_X 76 TVEELRKKMGR-ENSP---EYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFYGRLFPRNTLHFIHSSYSLMW 151 (359)
T ss_dssp HHHHHHHSSSC-SSCC---EEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSSSCCSCTTCBSCEEEESCTTB
T ss_pred HHHHHHHhcCC-CCCC---ceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhhhccCCCCceEEEEehhhhhh
Confidence 99999876432 1267 99999999999999999999985 2579999999999999999999999999999999
Q ss_pred ccCCCccccCCCCCCCCCCcccccCC-CHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEEEEeecccCCCCCCCCCchh
Q 017702 163 LSKVPKEIVDPCSPAWNKGSIQCSES-NIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVG 241 (367)
Q Consensus 163 Ls~~P~~~~~~~~~~~n~g~i~~~~~-~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g~~~n~~~~~~~~~~ 241 (367)
||++|+.+.+ |||+||++++ +++|.++|++||++||..||++|++||||||+||++++| +++..+.++ +.+
T Consensus 152 ls~~p~~l~~------nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~g-r~~~~~~~~-~~~ 223 (359)
T 1m6e_X 152 LSQVPIGIES------NKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILG-RRSEDRAST-ECC 223 (359)
T ss_dssp CSSCCSCCCC------CTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEE-CSSSSSSST-TTS
T ss_pred cccCchhhhc------cCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEec-CCCCCcccc-chH
Confidence 9999998887 9999999875 566889999999999999999999999999999999999 988766554 455
Q ss_pred hHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEEecCCCC------------CCHHH
Q 017702 242 VFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLSQPRRR------------ITANE 309 (367)
Q Consensus 242 ~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~~~p~~~------------~~~~~ 309 (367)
.+|+.|.++|++|+.+|+|+++++|+|++|+|+||++|++++|+++|+|+|+++|.++.++.+ ..++.
T Consensus 224 ~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~e~~~~~~~~~~~~~d~~~~~~~~g~~ 303 (359)
T 1m6e_X 224 LIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWSSCTKDGDGGGSVEEEGYN 303 (359)
T ss_dssp TTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEEEEEEETTCCSSCTTCCSSTTTTTTH
T ss_pred HHHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEEEEEEeeccCcccchhhhhhhhhHhHhH
Confidence 688999999999999999999999999999999999999999999999999999998765322 23579
Q ss_pred HHHhHHhhhhhhhhhccCHHHHHHHHHHHHHHHHhhhhHHHHhcCCeEEEEEEEEec
Q 017702 310 YASGIRAGIDGLIKKHFGDEFVDEIFNYFTTKVEENYSIIEEKIRNVSNLFISLKRF 366 (367)
Q Consensus 310 v~~~iRa~~~~~l~~~~~~~~~de~f~ry~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 366 (367)
+++|+||+.+|++.+|||++++|++|+||+++++++++. +..++++++++|+|+
T Consensus 304 ~a~~~Ra~~e~ll~~hfG~~i~d~lf~ry~~~~~~~~~~---~~~~~~~~~~~L~k~ 357 (359)
T 1m6e_X 304 VARCMRAVAEPLLLDHFGEAIIEDVFHRYKLLIIERMSK---EKTKFINVIVSLIRK 357 (359)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHS---SCCEEEEEEEEEEBC
T ss_pred hhhhhhhhcchhhHHhccHHHHHHHHHHHHHHHHHHHhh---CCCceEEEEEEEEeC
Confidence 999999999999999999999999999999999998773 566789999999997
|
| >2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-89 Score=673.32 Aligned_cols=342 Identities=35% Similarity=0.567 Sum_probs=290.3
Q ss_pred CCccceecccCCCCCchHHHhhHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCceEEeeecCCCCcccHHHHHHHHH
Q 017702 7 NNLTEAYPMVGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIADLGCSVGPNTLLAVQNIIE 86 (367)
Q Consensus 7 ~~~~~~~~M~gg~g~~sY~~nS~~Q~~~~~~~~~ll~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~nT~~~~~~ii~ 86 (367)
|++++++||+||+|++||++||. |++++..++|++++||.++.. ...| ...++++|||||||+|+||+.+++.||+
T Consensus 1 m~~~~~~~M~gg~G~~sY~~nS~-Q~~~~~~~~~~~~~ai~~l~~-~~~~--~~~~~~~IaDlGCssG~NT~~~v~~ii~ 76 (384)
T 2efj_A 1 MELQEVLHMNGGEGDTSYAKNSS-YNLFLIRVKPVLEQCIQELLR-ANLP--NINKCFKVGDLGCASGPNTFSTVRDIVQ 76 (384)
T ss_dssp --CTTTCCCCC----CCHHHHCC-TTTTHHHHHHHHHHHHHHHHH-TTCT--TTTTEEEEEEETCCSSHHHHHHHHHHHH
T ss_pred CCcccccccCCCCChhhHHHhHH-HHHHHHHHHHHHHHHHHHhhh-cccC--CcCCceEEEecCCCCCchHHHHHHHHHH
Confidence 68899999999999999999999 999999999999999998553 2211 0123899999999999999999999999
Q ss_pred HHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc------------cccceeeccCccccccCCCCCceeEE
Q 017702 87 AIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH------------ARKYFAAGLPGSFHSRLFPRSSIHFV 154 (367)
Q Consensus 87 ~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~------------~~~~f~~gvp~SFy~~l~P~~svd~~ 154 (367)
+|+++|.+......+| ||||+|||||.||||+||++||. .++||++|||||||+||||++|+|++
T Consensus 77 ~i~~~~~~~~~~~~~p---e~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f~~gvpgSFy~rlfp~~S~d~v 153 (384)
T 2efj_A 77 SIDKVGQEKKNELERP---TIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCLIGAMPGSFYSRLFPEESMHFL 153 (384)
T ss_dssp HHTCC----------C---EEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEEEEECCSCTTSCCSCTTCEEEE
T ss_pred HHHHHhhhcccCCCCC---ceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceEEEecchhhhhccCCCCceEEE
Confidence 9998886511111257 99999999999999999999974 24799999999999999999999999
Q ss_pred EeccccccccCCCccccCCCCCCCCCCcccccCC-CHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEEEEeecccCCC-
Q 017702 155 HTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSES-NIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDG- 232 (367)
Q Consensus 155 ~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~-~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g~~~n~- 232 (367)
||++||||||++|+.+.++.+++||||+||++++ +|+|.++|++||++||..||++|++||||||+||++++| +++.
T Consensus 154 ~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra~eL~pGG~mvl~~~g-r~~~~ 232 (384)
T 2efj_A 154 HSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHSEELISRGRMLLTFIC-KEDEF 232 (384)
T ss_dssp EEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC-CCTTT
T ss_pred EecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEEec-CCCcc
Confidence 9999999999999999999999999999999875 577889999999999999999999999999999999999 8876
Q ss_pred -CCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEEecCCCCC------
Q 017702 233 -IPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLSQPRRRI------ 305 (367)
Q Consensus 233 -~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~~~p~~~~------ 305 (367)
.+.++ +.+.++|++|+.+|+|+++++|+|++|+|+||++|++++|+++|+|+|+++|.++.++.+.
T Consensus 233 ~~~~~~-------~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~le~~~~~~~~~~~~~~~ 305 (384)
T 2efj_A 233 DHPNSM-------DLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYLETFNAPYDAGFSIDDD 305 (384)
T ss_dssp CCCCHH-------HHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEEEEEEEEETTTTCCC---
T ss_pred cCcccH-------HHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEEEEEEeeccccccccccc
Confidence 43321 4899999999999999999999999999999999999999999999999999987654322
Q ss_pred ---------------CHHHHHHhHHhhhhhhhhhccCHHHHHHHHHHHHHHHHhhhhHHHHhcCCeEEEEEEEEec
Q 017702 306 ---------------TANEYASGIRAGIDGLIKKHFGDEFVDEIFNYFTTKVEENYSIIEEKIRNVSNLFISLKRF 366 (367)
Q Consensus 306 ---------------~~~~v~~~iRa~~~~~l~~~~~~~~~de~f~ry~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 366 (367)
.++.+++++||+++|++.+|||++++|++|+||+++++++++. +..++++++++|+|+
T Consensus 306 ~~~~~~~~~~~d~~~~g~~~a~~iRa~~epll~~hfG~~i~d~lF~ry~~~~~~~~~~---~~~~~~~~~~~L~k~ 378 (384)
T 2efj_A 306 YQGRSHSPVSCDEHARAAHVASVVRSIYEPILASHFGEAILPDLSHRIAKNAAKVLRS---GKGFYDSVIISLAKK 378 (384)
T ss_dssp ------CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTHHHHHHHHHHHHHHHHHH---TCCEEEEEEEEEEEC
T ss_pred ccccccccccchHhHhHHHhhhhhHHhhhhhhHHhccHHHHHHHHHHHHHHHHHHHhh---CCCceEEEEEEEEEc
Confidence 1357899999999999999999999999999999999999873 566799999999997
|
| >3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=99.69 E-value=4.9e-16 Score=145.90 Aligned_cols=234 Identities=15% Similarity=0.164 Sum_probs=143.7
Q ss_pred ecccCCCCCchHHHhhHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCceEEeeecCCCCcccHHHHHHHHHHHHHHH
Q 017702 13 YPMVGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIADLGCSVGPNTLLAVQNIIEAIELKF 92 (367)
Q Consensus 13 ~~M~gg~g~~sY~~nS~~Q~~~~~~~~~ll~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~ 92 (367)
..|...-....|.+++..|......+...+ . .....+|+|+|||+|..+..+.+
T Consensus 24 ~~~~~~w~a~~y~~~~~~~~~~~~~l~~~l--------~--------~~~~~~vLDiGcG~G~~~~~l~~---------- 77 (279)
T 3ccf_A 24 GTAKNFWDATLYQDKHSFVWQYGEDLLQLL--------N--------PQPGEFILDLGCGTGQLTEKIAQ---------- 77 (279)
T ss_dssp -----------------CCSSSCCHHHHHH--------C--------CCTTCEEEEETCTTSHHHHHHHH----------
T ss_pred ccchhhcCHHHHhhcchHHHHHHHHHHHHh--------C--------CCCCCEEEEecCCCCHHHHHHHh----------
Confidence 344433334577777666655444332221 1 23457999999999999887752
Q ss_pred HhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCccccccCCCCCceeEEEeccccccccCCCccccC
Q 017702 93 QRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVD 172 (367)
Q Consensus 93 ~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~ 172 (367)
+ ..+|+-.|+...-....-+.. .+-.|..+. +. .+.+++++|+++|+.++||+.
T Consensus 78 ---------~---~~~v~gvD~s~~~~~~a~~~~--~~~~~~~~d---~~-~~~~~~~fD~v~~~~~l~~~~-------- 131 (279)
T 3ccf_A 78 ---------S---GAEVLGTDNAATMIEKARQNY--PHLHFDVAD---AR-NFRVDKPLDAVFSNAMLHWVK-------- 131 (279)
T ss_dssp ---------T---TCEEEEEESCHHHHHHHHHHC--TTSCEEECC---TT-TCCCSSCEEEEEEESCGGGCS--------
T ss_pred ---------C---CCeEEEEECCHHHHHHHHhhC--CCCEEEECC---hh-hCCcCCCcCEEEEcchhhhCc--------
Confidence 1 225777787543222221222 122344443 22 233468999999999999965
Q ss_pred CCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHH
Q 017702 173 PCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFN 252 (367)
Q Consensus 173 ~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~ 252 (367)
|+..+|+..++-|+|||++++.+++ .++. ..+.+.+...+.
T Consensus 132 ------------------------------d~~~~l~~~~~~LkpgG~l~~~~~~-~~~~--------~~~~~~~~~~~~ 172 (279)
T 3ccf_A 132 ------------------------------EPEAAIASIHQALKSGGRFVAEFGG-KGNI--------KYILEALYNALE 172 (279)
T ss_dssp ------------------------------CHHHHHHHHHHHEEEEEEEEEEEEC-TTTT--------HHHHHHHHHHHH
T ss_pred ------------------------------CHHHHHHHHHHhcCCCcEEEEEecC-Ccch--------HHHHHHHHHHHH
Confidence 3335888889999999999999887 4331 122233333333
Q ss_pred HHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEEecCCCCC-CHHHHHHhHHhhhhhhhhhccCHHHH
Q 017702 253 DLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLSQPRRRI-TANEYASGIRAGIDGLIKKHFGDEFV 331 (367)
Q Consensus 253 ~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~~~p~~~~-~~~~v~~~iRa~~~~~l~~~~~~~~~ 331 (367)
. .|.. ......|+++++.+++.+++++.| |++..++.+..+.... ++..+..|++++..+++. .++++..
T Consensus 173 ~---~~~~----~~~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~ 243 (279)
T 3ccf_A 173 T---LGIH----NPQALNPWYFPSIGEYVNILEKQG-FDVTYAALFNRPTTLAEGEFGMANWIQMFASAFLV-GLTPDQQ 243 (279)
T ss_dssp H---HTCC----CGGGGCCCCCCCHHHHHHHHHHHT-EEEEEEEEEECCEECSSGGGHHHHHHHHHCHHHHT-TCCHHHH
T ss_pred h---cCCc----cccCcCceeCCCHHHHHHHHHHcC-CEEEEEEEecccccccCCHHHHHHHHHHhhHHHhc-cCCHHHH
Confidence 2 2321 223456788999999999999997 9999998887774333 567889999987777766 4888888
Q ss_pred HHHHHHHHHHHHhhh
Q 017702 332 DEIFNYFTTKVEENY 346 (367)
Q Consensus 332 de~f~ry~~~~~~~~ 346 (367)
+++.+++.+.+....
T Consensus 244 ~~~~~~~~~~~~~~~ 258 (279)
T 3ccf_A 244 VQLIRKVEATLQDKL 258 (279)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhc
Confidence 898888888776653
|
| >2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.63 E-value=3.9e-15 Score=137.24 Aligned_cols=228 Identities=13% Similarity=0.172 Sum_probs=143.5
Q ss_pred chHHHhhHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCC
Q 017702 22 YSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQK 101 (367)
Q Consensus 22 ~sY~~nS~~Q~~~~~~~~~ll~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~ 101 (367)
..|.+.+..|......+ +.. + . .....+|+|+|||+|..+..+.+..
T Consensus 9 ~~y~~~~~~~~~~~~~l-------~~~-~--~------~~~~~~vLdiG~G~G~~~~~l~~~~----------------- 55 (259)
T 2p35_A 9 QQYLKFEDERTRPARDL-------LAQ-V--P------LERVLNGYDLGCGPGNSTELLTDRY----------------- 55 (259)
T ss_dssp GGGBCCCCGGGHHHHHH-------HTT-C--C------CSCCSSEEEETCTTTHHHHHHHHHH-----------------
T ss_pred HHHHHHHHHHHHHHHHH-------HHh-c--C------CCCCCEEEEecCcCCHHHHHHHHhC-----------------
Confidence 57888877777765532 211 1 1 2345799999999999998776432
Q ss_pred CCcceeEEEEcCCCccchHHHhhcCCccccceeeccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCC
Q 017702 102 PSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKG 181 (367)
Q Consensus 102 p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g 181 (367)
| ..+++..|+...-....-+..+ +-.|..+. +.. +.|++++|+++|+.++||+.
T Consensus 56 ~---~~~v~~~D~s~~~~~~a~~~~~--~~~~~~~d---~~~-~~~~~~fD~v~~~~~l~~~~----------------- 109 (259)
T 2p35_A 56 G---VNVITGIDSDDDMLEKAADRLP--NTNFGKAD---LAT-WKPAQKADLLYANAVFQWVP----------------- 109 (259)
T ss_dssp C---TTSEEEEESCHHHHHHHHHHST--TSEEEECC---TTT-CCCSSCEEEEEEESCGGGST-----------------
T ss_pred C---CCEEEEEECCHHHHHHHHHhCC--CcEEEECC---hhh-cCccCCcCEEEEeCchhhCC-----------------
Confidence 1 1256777775433222222211 22244443 222 33788999999999999964
Q ss_pred cccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCC
Q 017702 182 SIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLS 261 (367)
Q Consensus 182 ~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~ 261 (367)
|...+|+...+-|+|||+|++..++ ..+. .....+.++...+...
T Consensus 110 ---------------------~~~~~l~~~~~~L~pgG~l~~~~~~-~~~~-------------~~~~~~~~~~~~~~~~ 154 (259)
T 2p35_A 110 ---------------------DHLAVLSQLMDQLESGGVLAVQMPD-NLQE-------------PTHIAMHETADGGPWK 154 (259)
T ss_dssp ---------------------THHHHHHHHGGGEEEEEEEEEEEEC-CTTS-------------HHHHHHHHHHHHSTTG
T ss_pred ---------------------CHHHHHHHHHHhcCCCeEEEEEeCC-CCCc-------------HHHHHHHHHhcCcchH
Confidence 3446889999999999999999976 3221 1112233333332221
Q ss_pred Hhhhhcc-CCCcccCCHHHHHHHHHhCCceEEeEEEEEecCCCCCCHHHHHHhHHhhh-hhhhhhccCHHHHHHHHHHHH
Q 017702 262 EEKVDSF-NLPTYNATPKELEAIIRTNGNFTIEKMEKLSQPRRRITANEYASGIRAGI-DGLIKKHFGDEFVDEIFNYFT 339 (367)
Q Consensus 262 ~~~~d~f-~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~~~p~~~~~~~~v~~~iRa~~-~~~l~~~~~~~~~de~f~ry~ 339 (367)
. ..... ..+..+++.+++.+++++.| |+++..+..... .+.++..+..|++++. .+++. .++++..++|.+++.
T Consensus 155 ~-~~~~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~ 230 (259)
T 2p35_A 155 D-AFSGGGLRRKPLPPPSDYFNALSPKS-SRVDVWHTVYNH-PMKDADSIVEWVKGTGLRPYLA-AAGEENREAFLADYT 230 (259)
T ss_dssp G-GC-------CCCCCHHHHHHHHGGGE-EEEEEEEEEEEE-EESCHHHHHHHHTTTTTTHHHH-TTCGGGHHHHHHHHH
T ss_pred H-HhccccccccCCCCHHHHHHHHHhcC-CceEEEEEEeee-ccCCchHHhhhhhcCcchHHHH-hCCHHHHHHHHHHHH
Confidence 1 11111 23566889999999999997 987655543211 2457788999999764 45554 588899999999999
Q ss_pred HHHHhhhh
Q 017702 340 TKVEENYS 347 (367)
Q Consensus 340 ~~~~~~~~ 347 (367)
+.+++...
T Consensus 231 ~~~~~~~~ 238 (259)
T 2p35_A 231 RRIAAAYP 238 (259)
T ss_dssp HHHHHHSC
T ss_pred HHHHHhCC
Confidence 98876643
|
| >2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A | Back alignment and structure |
|---|
Probab=99.55 E-value=8.4e-14 Score=128.37 Aligned_cols=223 Identities=12% Similarity=0.124 Sum_probs=137.5
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC--ccccceeeccC
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP--HARKYFAAGLP 138 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~--~~~~~f~~gvp 138 (367)
....+|+|+|||+|..+..+.+. ..+++-.|+...-....-+.+. ..+-.|..+
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~----------------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-- 93 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIAR----------------------GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQA-- 93 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTT----------------------TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEES--
T ss_pred CCCCEEEEeCCcCCHHHHHHHHC----------------------CCEEEEEECCHHHHHHHHHHhhccCCceEEEEc--
Confidence 34579999999999999877521 1246666765433222222221 111223333
Q ss_pred ccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccC
Q 017702 139 GSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPG 218 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 218 (367)
++..-.+|++++|+++++.++||+. |...+|+...+-|+||
T Consensus 94 -d~~~~~~~~~~fD~v~~~~~l~~~~--------------------------------------~~~~~l~~~~~~L~pg 134 (263)
T 2yqz_A 94 -DARAIPLPDESVHGVIVVHLWHLVP--------------------------------------DWPKVLAEAIRVLKPG 134 (263)
T ss_dssp -CTTSCCSCTTCEEEEEEESCGGGCT--------------------------------------THHHHHHHHHHHEEEE
T ss_pred -ccccCCCCCCCeeEEEECCchhhcC--------------------------------------CHHHHHHHHHHHCCCC
Confidence 3333346789999999999999965 2335888888999999
Q ss_pred ceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEE
Q 017702 219 GLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKL 298 (367)
Q Consensus 219 G~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~ 298 (367)
|++++.+.. .+.. ......+.+...+.. .|.- ...+..+++.+++.+++++.| |++...+..
T Consensus 135 G~l~~~~~~-~~~~------~~~~~~~~~~~~~~~---~~~~-------~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~ 196 (263)
T 2yqz_A 135 GALLEGWDQ-AEAS------PEWTLQERWRAFAAE---EGFP-------VERGLHAKRLKEVEEALRRLG-LKPRTREVA 196 (263)
T ss_dssp EEEEEEEEE-ECCC------HHHHHHHHHHHHHHH---HTCC-------CCCCHHHHHHHHHHHHHHHTT-CCCEEEEEE
T ss_pred cEEEEEecC-CCcc------HHHHHHHHHHHHHHH---hCCC-------cccccccCCHHHHHHHHHHcC-CCcceEEEe
Confidence 999999444 2111 000112222222221 1211 112445678999999999997 998877665
Q ss_pred ecCCCCCCHHHHHHhHHhhhhhhhhhccCHHHHHHHHHHHHHHHHhhhhHHHHhcCCeEEEEEEEEec
Q 017702 299 SQPRRRITANEYASGIRAGIDGLIKKHFGDEFVDEIFNYFTTKVEENYSIIEEKIRNVSNLFISLKRF 366 (367)
Q Consensus 299 ~~p~~~~~~~~v~~~iRa~~~~~l~~~~~~~~~de~f~ry~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 366 (367)
..+. ..+++.+..++++...+... +++++..+++.+++.+.+.+..........-+..++++.-||
T Consensus 197 ~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~rk 262 (263)
T 2yqz_A 197 RWRE-ERTPREALEALSERLYSFTQ-GLPEPVHARVMERLWAWAEAELGDLDRPFPVEKRFLLRVSRL 262 (263)
T ss_dssp EEEE-EECHHHHHHHHHTTCSGGGS-SSCHHHHHHHHHHHHHHHHHHSSCTTSCEEEEEEEEEEEEEC
T ss_pred eeec-CCCHHHHHHHHHHhhccccc-CCCHHHHHHHHHHHHHHHHHhcCCcCccccccceeEEEeeec
Confidence 4431 34578888888876555554 689999999999999888776442111122255566666554
|
| >3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes} | Back alignment and structure |
|---|
Probab=99.30 E-value=1.1e-10 Score=108.30 Aligned_cols=192 Identities=16% Similarity=0.146 Sum_probs=112.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC---C-ccccceeecc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL---P-HARKYFAAGL 137 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l---~-~~~~~f~~gv 137 (367)
...+|+|+|||+|..+..+.+.. ..+|+--|+...-....-+.+ . ..+-.|..+
T Consensus 61 ~~~~vLDiGcG~G~~~~~l~~~~---------------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~- 118 (273)
T 3bus_A 61 SGDRVLDVGCGIGKPAVRLATAR---------------------DVRVTGISISRPQVNQANARATAAGLANRVTFSYA- 118 (273)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHS---------------------CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEEC-
T ss_pred CCCEEEEeCCCCCHHHHHHHHhc---------------------CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEC-
Confidence 45799999999999998776321 124666666432211111111 1 011223333
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
++..--+|++++|+|+|..++||+.+ ...+|+...+-|+|
T Consensus 119 --d~~~~~~~~~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~L~p 158 (273)
T 3bus_A 119 --DAMDLPFEDASFDAVWALESLHHMPD--------------------------------------RGRALREMARVLRP 158 (273)
T ss_dssp --CTTSCCSCTTCEEEEEEESCTTTSSC--------------------------------------HHHHHHHHHTTEEE
T ss_pred --ccccCCCCCCCccEEEEechhhhCCC--------------------------------------HHHHHHHHHHHcCC
Confidence 34444467899999999999999642 23588999999999
Q ss_pred CceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEE
Q 017702 218 GGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEK 297 (367)
Q Consensus 218 GG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~ 297 (367)
||++++..+. ..+... ......+..+.. .+ ...++++.+++.+++++.| |++...+.
T Consensus 159 gG~l~i~~~~-~~~~~~----------~~~~~~~~~~~~----------~~-~~~~~~~~~~~~~~l~~aG-f~~~~~~~ 215 (273)
T 3bus_A 159 GGTVAIADFV-LLAPVE----------GAKKEAVDAFRA----------GG-GVLSLGGIDEYESDVRQAE-LVVTSTVD 215 (273)
T ss_dssp EEEEEEEEEE-ESSCCC----------HHHHHHHHHHHH----------HH-TCCCCCCHHHHHHHHHHTT-CEEEEEEE
T ss_pred CeEEEEEEee-ccCCCC----------hhHHHHHHHHHh----------hc-CccCCCCHHHHHHHHHHcC-CeEEEEEE
Confidence 9999999887 433211 111111111110 01 1234789999999999997 99988877
Q ss_pred EecCCCCCCHHHHHHhHHhhhhhhhhhccCHHHHHHHHHHHHH
Q 017702 298 LSQPRRRITANEYASGIRAGIDGLIKKHFGDEFVDEIFNYFTT 340 (367)
Q Consensus 298 ~~~p~~~~~~~~v~~~iRa~~~~~l~~~~~~~~~de~f~ry~~ 340 (367)
+.... ...-..+...+++....+ ...++++..+.+.+.++.
T Consensus 216 ~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 256 (273)
T 3bus_A 216 ISAQA-RPSLVKTAEAFENARSQV-EPFMGAEGLDRMIATFRG 256 (273)
T ss_dssp CHHHH-TTHHHHHHHHHHHTHHHH-HHHHCHHHHHHHHHHHHH
T ss_pred CcHhH-HHHHHHHHHHHHHhHHHH-HhhcCHHHHHHHHHHHHH
Confidence 64321 111123333333332222 335777777777666654
|
| >3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei} | Back alignment and structure |
|---|
Probab=99.28 E-value=1.6e-10 Score=104.74 Aligned_cols=169 Identities=14% Similarity=0.151 Sum_probs=110.7
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCcc-ccceeeccCc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHA-RKYFAAGLPG 139 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~-~~~f~~gvp~ 139 (367)
.+..+|+|+|||+|..+..+.+.. | ..+++.-|+...-....-+.+... +--|..+.
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~-----------------~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d-- 100 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKY-----------------P---EATFTLVDMSEKMLEIAKNRFRGNLKVKYIEAD-- 100 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHC-----------------T---TCEEEEEESCHHHHHHHHHHTCSCTTEEEEESC--
T ss_pred CCCCeEEEecCCCCHHHHHHHHhC-----------------C---CCeEEEEECCHHHHHHHHHhhccCCCEEEEeCc--
Confidence 346899999999999988776322 2 246788888643333322333221 22244443
Q ss_pred cccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 140 SFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
+....++ +++|+++++.++||+++ .+...+|+.-.+-|+|||
T Consensus 101 -~~~~~~~-~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~LkpgG 142 (234)
T 3dtn_A 101 -YSKYDFE-EKYDMVVSALSIHHLED------------------------------------EDKKELYKRSYSILKESG 142 (234)
T ss_dssp -TTTCCCC-SCEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHEEEEE
T ss_pred -hhccCCC-CCceEEEEeCccccCCH------------------------------------HHHHHHHHHHHHhcCCCc
Confidence 3333334 99999999999999742 133458888899999999
Q ss_pred eEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccC---CCcccCCHHHHHHHHHhCCceEEeEEE
Q 017702 220 LMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFN---LPTYNATPKELEAIIRTNGNFTIEKME 296 (367)
Q Consensus 220 ~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~---~P~y~~s~eE~~~~l~~~g~F~I~~lE 296 (367)
++++.... .++. ..........|.....++-.+.+++..+. .-.+.++.+|+.++++++| |++.++.
T Consensus 143 ~l~~~~~~-~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aG-F~~v~~~ 212 (234)
T 3dtn_A 143 IFINADLV-HGET--------AFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQLNWLKEAG-FRDVSCI 212 (234)
T ss_dssp EEEEEEEC-BCSS--------HHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHHHHHHHTT-CEEEEEE
T ss_pred EEEEEEec-CCCC--------hhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHHHHHHHcC-CCceeee
Confidence 99999887 4432 11224445567666666666666554321 2334579999999999997 9988775
Q ss_pred EEe
Q 017702 297 KLS 299 (367)
Q Consensus 297 ~~~ 299 (367)
...
T Consensus 213 ~~~ 215 (234)
T 3dtn_A 213 YKY 215 (234)
T ss_dssp EEE
T ss_pred eee
Confidence 543
|
| >1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41 | Back alignment and structure |
|---|
Probab=99.26 E-value=1.4e-10 Score=107.13 Aligned_cols=154 Identities=14% Similarity=0.166 Sum_probs=95.7
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC---CccccceeeccC
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL---PHARKYFAAGLP 138 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l---~~~~~~f~~gvp 138 (367)
...+|+|+|||+|..+..+.+. .+ +|+-.|+...-....-+.+ ...+-.|..+.
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~-----------------~~-----~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d- 93 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPF-----------------VK-----KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGD- 93 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGG-----------------SS-----EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECC-
T ss_pred CCCEEEEEeCCCCHHHHHHHHh-----------------CC-----EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEec-
Confidence 4579999999999988876521 11 4666676532211111111 10112233333
Q ss_pred ccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccC
Q 017702 139 GSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPG 218 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 218 (367)
+..--+|++++|+++|+.++||+.+ ...+|+.-.+-|+||
T Consensus 94 --~~~l~~~~~~fD~V~~~~~l~~~~d--------------------------------------~~~~l~~~~r~Lkpg 133 (260)
T 1vl5_A 94 --AEQMPFTDERFHIVTCRIAAHHFPN--------------------------------------PASFVSEAYRVLKKG 133 (260)
T ss_dssp --C-CCCSCTTCEEEEEEESCGGGCSC--------------------------------------HHHHHHHHHHHEEEE
T ss_pred --HHhCCCCCCCEEEEEEhhhhHhcCC--------------------------------------HHHHHHHHHHHcCCC
Confidence 3343467899999999999999753 335888889999999
Q ss_pred ceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEE
Q 017702 219 GLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKL 298 (367)
Q Consensus 219 G~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~ 298 (367)
|+|++.... .++. ..+..+...+..+.. .....+.+.+++.+++++.| |++..++.+
T Consensus 134 G~l~~~~~~-~~~~---------~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~ 190 (260)
T 1vl5_A 134 GQLLLVDNS-APEN---------DAFDVFYNYVEKERD------------YSHHRAWKKSDWLKMLEEAG-FELEELHCF 190 (260)
T ss_dssp EEEEEEEEE-BCSS---------HHHHHHHHHHHHHHC------------TTCCCCCBHHHHHHHHHHHT-CEEEEEEEE
T ss_pred CEEEEEEcC-CCCC---------HHHHHHHHHHHHhcC------------ccccCCCCHHHHHHHHHHCC-CeEEEEEEe
Confidence 999998766 3331 111222222222111 11234678999999999997 999988887
Q ss_pred ecC
Q 017702 299 SQP 301 (367)
Q Consensus 299 ~~p 301 (367)
..+
T Consensus 191 ~~~ 193 (260)
T 1vl5_A 191 HKT 193 (260)
T ss_dssp EEE
T ss_pred ecc
Confidence 655
|
| >1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=5.7e-11 Score=108.81 Aligned_cols=155 Identities=18% Similarity=0.229 Sum_probs=95.5
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC---ccccceeecc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP---HARKYFAAGL 137 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~---~~~~~f~~gv 137 (367)
....+|+|+|||+|..+..+.+. .+ +++..|+...-....-+.+. ..+-.|..+.
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~~~-----------------~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d 77 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFSPY-----------------VQ-----ECIGVDATKEMVEVASSFAQEKGVENVRFQQGT 77 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG-----------------SS-----EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECB
T ss_pred CCCCEEEEEccCcCHHHHHHHHh-----------------CC-----EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecc
Confidence 45689999999999988876521 11 46666664322111111110 0111233332
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
+..--++++++|+++|+.++||+. |...+|+.-++-|+|
T Consensus 78 ---~~~~~~~~~~fD~v~~~~~l~~~~--------------------------------------~~~~~l~~~~~~Lkp 116 (239)
T 1xxl_A 78 ---AESLPFPDDSFDIITCRYAAHHFS--------------------------------------DVRKAVREVARVLKQ 116 (239)
T ss_dssp ---TTBCCSCTTCEEEEEEESCGGGCS--------------------------------------CHHHHHHHHHHHEEE
T ss_pred ---cccCCCCCCcEEEEEECCchhhcc--------------------------------------CHHHHHHHHHHHcCC
Confidence 333346779999999999999964 233588888999999
Q ss_pred CceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEE
Q 017702 218 GGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEK 297 (367)
Q Consensus 218 GG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~ 297 (367)
||++++.... .++. ...+.+.+.+..+. .+ ....+.+.+++.+++++.| |++..++.
T Consensus 117 gG~l~~~~~~-~~~~---------~~~~~~~~~~~~~~-~~-----------~~~~~~~~~~~~~ll~~aG-f~~~~~~~ 173 (239)
T 1xxl_A 117 DGRFLLVDHY-APED---------PVLDEFVNHLNRLR-DP-----------SHVRESSLSEWQAMFSANQ-LAYQDIQK 173 (239)
T ss_dssp EEEEEEEEEC-BCSS---------HHHHHHHHHHHHHH-CT-----------TCCCCCBHHHHHHHHHHTT-EEEEEEEE
T ss_pred CcEEEEEEcC-CCCC---------hhHHHHHHHHHHhc-cc-----------cccCCCCHHHHHHHHHHCC-CcEEEEEe
Confidence 9999998776 3331 11122222222111 11 1123568999999999997 99998888
Q ss_pred EecC
Q 017702 298 LSQP 301 (367)
Q Consensus 298 ~~~p 301 (367)
+..+
T Consensus 174 ~~~~ 177 (239)
T 1xxl_A 174 WNLP 177 (239)
T ss_dssp EEEE
T ss_pred ecCc
Confidence 7655
|
| >3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=1.9e-09 Score=102.01 Aligned_cols=168 Identities=13% Similarity=0.110 Sum_probs=99.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC---Ccc-ccceeecc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL---PHA-RKYFAAGL 137 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l---~~~-~~~f~~gv 137 (367)
...+|+|+|||+|..+..+.+.. + .+|+--|+..+-....-+.+ ... +-.|..+.
T Consensus 72 ~~~~vLDiGcG~G~~~~~la~~~-----------------~----~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d 130 (302)
T 3hem_A 72 PGMTLLDIGCGWGSTMRHAVAEY-----------------D----VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQG 130 (302)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH-----------------C----CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECC
T ss_pred CcCEEEEeeccCcHHHHHHHHhC-----------------C----CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECC
Confidence 45799999999999998887432 1 24666676533222111111 111 22244444
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
- ..+ ++++|+|+|..++|++.+... .. ..+++..+|+.-.+-|+|
T Consensus 131 ~----~~~--~~~fD~v~~~~~~~~~~d~~~-~~----------------------------~~~~~~~~l~~~~~~Lkp 175 (302)
T 3hem_A 131 W----EEF--DEPVDRIVSLGAFEHFADGAG-DA----------------------------GFERYDTFFKKFYNLTPD 175 (302)
T ss_dssp G----GGC--CCCCSEEEEESCGGGTTCCSS-CC----------------------------CTTHHHHHHHHHHHSSCT
T ss_pred H----HHc--CCCccEEEEcchHHhcCcccc-cc----------------------------chhHHHHHHHHHHHhcCC
Confidence 2 223 789999999999999765421 00 013677899999999999
Q ss_pred CceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCC-cccCCHHHHHHHHHhCCceEEeEEE
Q 017702 218 GGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLP-TYNATPKELEAIIRTNGNFTIEKME 296 (367)
Q Consensus 218 GG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P-~y~~s~eE~~~~l~~~g~F~I~~lE 296 (367)
||+|++.... .++............++ ...+.+. +....+| .+.|+.+++.+++++.| |+++.++
T Consensus 176 gG~l~i~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~----------~~~~~~p~~~~~s~~~~~~~l~~aG-f~~~~~~ 241 (302)
T 3hem_A 176 DGRMLLHTIT-IPDKEEAQELGLTSPMS--LLRFIKF----------ILTEIFPGGRLPRISQVDYYSSNAG-WKVERYH 241 (302)
T ss_dssp TCEEEEEEEE-CCCHHHHHHHTCCCCHH--HHHHHHH----------HHHHTCTTCCCCCHHHHHHHHHHHT-CEEEEEE
T ss_pred CcEEEEEEEe-ccCccchhhcccccccc--ccchHHH----------HHHhcCCCCCCCCHHHHHHHHHhCC-cEEEEEE
Confidence 9999999987 44311000000000000 0000011 1122334 36899999999999997 9999887
Q ss_pred EEe
Q 017702 297 KLS 299 (367)
Q Consensus 297 ~~~ 299 (367)
.+.
T Consensus 242 ~~~ 244 (302)
T 3hem_A 242 RIG 244 (302)
T ss_dssp ECG
T ss_pred eCc
Confidence 653
|
| >3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=9.1e-10 Score=101.15 Aligned_cols=192 Identities=14% Similarity=0.111 Sum_probs=114.6
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc-cccceeeccCc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH-ARKYFAAGLPG 139 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~-~~~~f~~gvp~ 139 (367)
....+|+|+|||+|..+..+.... ..+|+--|+...-....-+.... .+-.|..+.
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~---------------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d-- 110 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKY---------------------GAHTHGIDICSNIVNMANERVSGNNKIIFEAND-- 110 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH---------------------CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECC--
T ss_pred CCCCEEEEECCCCCHHHHHHHHHc---------------------CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECc--
Confidence 345799999999999998876432 12466767754322222222221 122233333
Q ss_pred cccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 140 SFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
+..--+|++++|+|+|+.++||++. .|...+|+.-.+-|+|||
T Consensus 111 -~~~~~~~~~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~L~pgG 153 (266)
T 3ujc_A 111 -ILTKEFPENNFDLIYSRDAILALSL------------------------------------ENKNKLFQKCYKWLKPTG 153 (266)
T ss_dssp -TTTCCCCTTCEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHEEEEE
T ss_pred -cccCCCCCCcEEEEeHHHHHHhcCh------------------------------------HHHHHHHHHHHHHcCCCC
Confidence 3333567899999999999999631 266779999999999999
Q ss_pred eEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEEe
Q 017702 220 LMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLS 299 (367)
Q Consensus 220 ~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~~ 299 (367)
++++..+. .++..... ..+...+.. . ...+++.+++.+++++.| |++...+.+.
T Consensus 154 ~l~~~~~~-~~~~~~~~--------~~~~~~~~~---~-------------~~~~~~~~~~~~~l~~~G-f~~~~~~~~~ 207 (266)
T 3ujc_A 154 TLLITDYC-ATEKENWD--------DEFKEYVKQ---R-------------KYTLITVEEYADILTACN-FKNVVSKDLS 207 (266)
T ss_dssp EEEEEEEE-ESCGGGCC--------HHHHHHHHH---H-------------TCCCCCHHHHHHHHHHTT-CEEEEEEECH
T ss_pred EEEEEEec-cCCcccch--------HHHHHHHhc---C-------------CCCCCCHHHHHHHHHHcC-CeEEEEEeCC
Confidence 99999987 44311110 111111111 1 123779999999999997 9998877653
Q ss_pred cCCCCCCHHHHHHhHHhhhh--hhhhhccCHHHHHHHHHHHHHHH
Q 017702 300 QPRRRITANEYASGIRAGID--GLIKKHFGDEFVDEIFNYFTTKV 342 (367)
Q Consensus 300 ~p~~~~~~~~v~~~iRa~~~--~~l~~~~~~~~~de~f~ry~~~~ 342 (367)
.+ ....+..|.+.+.. .-+...++++..+.+.+.....+
T Consensus 208 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (266)
T 3ujc_A 208 DY----WNQLLEVEHKYLHENKEEFLKLFSEKKFISLDDGWSRKI 248 (266)
T ss_dssp HH----HHHHHHHHHHHHHHTHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred HH----HHHHHHHHHHHHHhCHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 22 11233344433221 11222356666555555554443
|
| >3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei} | Back alignment and structure |
|---|
Probab=99.14 E-value=8.1e-10 Score=102.74 Aligned_cols=201 Identities=16% Similarity=0.173 Sum_probs=112.9
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC---Cccccceeecc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL---PHARKYFAAGL 137 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l---~~~~~~f~~gv 137 (367)
....+|+|+|||+|..+..+.+. .| ..+++--|...+-....-+.+ ...+-.|..+
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~-----------------~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~- 94 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKN-----------------NP---DAEITSIDISPESLEKARENTEKNGIKNVKFLQA- 94 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHH-----------------CT---TSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEEC-
T ss_pred CCCCeEEEecCCCCHHHHHHHHh-----------------CC---CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEc-
Confidence 44689999999999988877532 12 236777777543222211111 1112223333
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
+.....+|++++|+|+++.++||+.+ ...+|+.-.+-|+|
T Consensus 95 --d~~~~~~~~~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~L~p 134 (276)
T 3mgg_A 95 --NIFSLPFEDSSFDHIFVCFVLEHLQS--------------------------------------PEEALKSLKKVLKP 134 (276)
T ss_dssp --CGGGCCSCTTCEEEEEEESCGGGCSC--------------------------------------HHHHHHHHHHHEEE
T ss_pred --ccccCCCCCCCeeEEEEechhhhcCC--------------------------------------HHHHHHHHHHHcCC
Confidence 34444578899999999999999653 23588888899999
Q ss_pred CceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHH-HHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEE
Q 017702 218 GGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDL-AKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKME 296 (367)
Q Consensus 218 GG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m-~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE 296 (367)
||++++.... .+...... ......+.. ..+..+ ...| ....+.+++.+++++.| |++..++
T Consensus 135 gG~l~~~~~~-~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~-------------~~~~~~~~l~~~l~~aG-f~~v~~~ 196 (276)
T 3mgg_A 135 GGTITVIEGD-HGSCYFHP--EGKKAIEAW-NCLIRVQAYMK-------------GNSLVGRQIYPLLQESG-FEKIRVE 196 (276)
T ss_dssp EEEEEEEEEC-GGGCEEES--CCHHHHHHH-HHHHHHHHHTT-------------CCTTGGGGHHHHHHHTT-CEEEEEE
T ss_pred CcEEEEEEcC-CCCceECC--CcHHHHHHH-HHHHHHHHhcC-------------CCcchHHHHHHHHHHCC-CCeEEEe
Confidence 9999998765 32211000 011111111 111111 1111 11345688999999997 9999998
Q ss_pred EEecCCCCCCHHHHHHhH--------Hhhhhhhhhh-ccCHHHHHHHHHHHHH
Q 017702 297 KLSQPRRRITANEYASGI--------RAGIDGLIKK-HFGDEFVDEIFNYFTT 340 (367)
Q Consensus 297 ~~~~p~~~~~~~~v~~~i--------Ra~~~~~l~~-~~~~~~~de~f~ry~~ 340 (367)
....+.....+..+..+. +.......+. .++++.++++.+++.+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 249 (276)
T 3mgg_A 197 PRMVYIDSSKPELVDGFILKTIIPMVEGVKEQSLKMQIIKEEEWEKGIEELHK 249 (276)
T ss_dssp EEEEEECTTCHHHHHHTTTTTHHHHHHTTHHHHHHTTSSCHHHHHHHHHHHHH
T ss_pred eEEEECCCCChHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHh
Confidence 876553333333322222 2222222222 2356666666666644
|
| >2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18 | Back alignment and structure |
|---|
Probab=99.13 E-value=4.1e-09 Score=99.13 Aligned_cols=149 Identities=15% Similarity=0.102 Sum_probs=94.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC---Cc-cccceeecc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL---PH-ARKYFAAGL 137 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l---~~-~~~~f~~gv 137 (367)
...+|+|+|||+|..+..+.+.. ..+++--|+...-....-+.+ .. .+--|..+
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~~~~---------------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~- 139 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLVRKF---------------------GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYG- 139 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH---------------------CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEEC-
T ss_pred CCCEEEEeCCCCCHHHHHHHHHh---------------------CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEc-
Confidence 45799999999999998876432 125666676532211111111 00 11223333
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
++..--+|++++|++++..++||+.+ ...+|+...+-|+|
T Consensus 140 --d~~~~~~~~~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~Lkp 179 (297)
T 2o57_A 140 --SFLEIPCEDNSYDFIWSQDAFLHSPD--------------------------------------KLKVFQECARVLKP 179 (297)
T ss_dssp --CTTSCSSCTTCEEEEEEESCGGGCSC--------------------------------------HHHHHHHHHHHEEE
T ss_pred --CcccCCCCCCCEeEEEecchhhhcCC--------------------------------------HHHHHHHHHHHcCC
Confidence 34444567899999999999999653 23588889999999
Q ss_pred CceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEE
Q 017702 218 GGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEK 297 (367)
Q Consensus 218 GG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~ 297 (367)
||+|++..+. ..+.... ..+...+.. +..| .+++.+++.+++++.| |++.+.+.
T Consensus 180 gG~l~~~~~~-~~~~~~~---------~~~~~~~~~--------------~~~~-~~~~~~~~~~~l~~aG-f~~~~~~~ 233 (297)
T 2o57_A 180 RGVMAITDPM-KEDGIDK---------SSIQPILDR--------------IKLH-DMGSLGLYRSLAKECG-LVTLRTFS 233 (297)
T ss_dssp EEEEEEEEEE-ECTTCCG---------GGGHHHHHH--------------HTCS-SCCCHHHHHHHHHHTT-EEEEEEEE
T ss_pred CeEEEEEEec-cCCCCch---------HHHHHHHHH--------------hcCC-CCCCHHHHHHHHHHCC-CeEEEEEE
Confidence 9999999887 4432110 011111111 1112 2579999999999997 99988876
Q ss_pred E
Q 017702 298 L 298 (367)
Q Consensus 298 ~ 298 (367)
+
T Consensus 234 ~ 234 (297)
T 2o57_A 234 R 234 (297)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian} | Back alignment and structure |
|---|
Probab=99.13 E-value=6.4e-10 Score=99.73 Aligned_cols=156 Identities=18% Similarity=0.190 Sum_probs=98.7
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCccc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSF 141 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SF 141 (367)
...+|+|+|||+|..+..+.+. ..+++--|+...-....-+.++ .+--|..+. +
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~----------------------~~~v~~vD~s~~~~~~a~~~~~-~~~~~~~~d---~ 98 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLA----------------------GRTVYGIEPSREMRMIAKEKLP-KEFSITEGD---F 98 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHT----------------------TCEEEEECSCHHHHHHHHHHSC-TTCCEESCC---S
T ss_pred CCCeEEEeCCCCCHHHHHHHhC----------------------CCeEEEEeCCHHHHHHHHHhCC-CceEEEeCC---h
Confidence 3479999999999988877521 1257777876433222222222 122233333 3
Q ss_pred cccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceE
Q 017702 142 HSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLM 221 (367)
Q Consensus 142 y~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~l 221 (367)
.+-.++ +++|+++++.++||+.+. +...+|+.-.+-|+|||++
T Consensus 99 ~~~~~~-~~fD~v~~~~~l~~~~~~------------------------------------~~~~~l~~~~~~LkpgG~l 141 (220)
T 3hnr_A 99 LSFEVP-TSIDTIVSTYAFHHLTDD------------------------------------EKNVAIAKYSQLLNKGGKI 141 (220)
T ss_dssp SSCCCC-SCCSEEEEESCGGGSCHH------------------------------------HHHHHHHHHHHHSCTTCEE
T ss_pred hhcCCC-CCeEEEEECcchhcCChH------------------------------------HHHHHHHHHHHhcCCCCEE
Confidence 443445 999999999999996421 2234888889999999999
Q ss_pred EEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEE
Q 017702 222 VLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEK 297 (367)
Q Consensus 222 vl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~ 297 (367)
++..+. .++. ......+..+...|... ...-..+.++++.+++++++++.| |+|...+.
T Consensus 142 ~i~~~~-~~~~------------~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~~ 200 (220)
T 3hnr_A 142 VFADTI-FADQ------------DAYDKTVEAAKQRGFHQ---LANDLQTEYYTRIPVMQTIFENNG-FHVTFTRL 200 (220)
T ss_dssp EEEEEC-BSSH------------HHHHHHHHHHHHTTCHH---HHHHHHHSCCCBHHHHHHHHHHTT-EEEEEEEC
T ss_pred EEEecc-ccCh------------HHHHHHHHHHHhCCCcc---chhhcchhhcCCHHHHHHHHHHCC-CEEEEeec
Confidence 999876 4331 22233334444444321 111123456789999999999997 99887654
|
| >3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.10 E-value=1.3e-09 Score=99.16 Aligned_cols=140 Identities=16% Similarity=0.203 Sum_probs=96.9
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc----cccceeeccC
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH----ARKYFAAGLP 138 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~----~~~~f~~gvp 138 (367)
..+|+|+|||+|..+..+. .+ ..+|+-.|+...-....-+.+.. .+--|..+.
T Consensus 67 ~~~vLDiGcG~G~~~~~l~-------------------~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d- 123 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMA-------------------SP---ERFVVGLDISESALAKANETYGSSPKAEYFSFVKED- 123 (235)
T ss_dssp CEEEEEETCTTCHHHHHHC-------------------BT---TEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCC-
T ss_pred CCCEEEeCCCCCHHHHHHH-------------------hC---CCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECc-
Confidence 3599999999999988664 12 34688888864332222222221 112244444
Q ss_pred ccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccC
Q 017702 139 GSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPG 218 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 218 (367)
+. .+.|+.++|+++++.++||+. | .|...+|+.-++-|+||
T Consensus 124 --~~-~~~~~~~fD~v~~~~~l~~~~--~----------------------------------~~~~~~l~~~~~~Lkpg 164 (235)
T 3lcc_A 124 --VF-TWRPTELFDLIFDYVFFCAIE--P----------------------------------EMRPAWAKSMYELLKPD 164 (235)
T ss_dssp --TT-TCCCSSCEEEEEEESSTTTSC--G----------------------------------GGHHHHHHHHHHHEEEE
T ss_pred --hh-cCCCCCCeeEEEEChhhhcCC--H----------------------------------HHHHHHHHHHHHHCCCC
Confidence 22 355778999999999999964 1 15557899999999999
Q ss_pred ceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEE
Q 017702 219 GLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKL 298 (367)
Q Consensus 219 G~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~ 298 (367)
|+|++.... .... ...|.+..+.+++.+++++.| |++..++..
T Consensus 165 G~l~~~~~~-~~~~-----------------------------------~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~ 207 (235)
T 3lcc_A 165 GELITLMYP-ITDH-----------------------------------VGGPPYKVDVSTFEEVLVPIG-FKAVSVEEN 207 (235)
T ss_dssp EEEEEEECC-CSCC-----------------------------------CSCSSCCCCHHHHHHHHGGGT-EEEEEEEEC
T ss_pred cEEEEEEec-cccc-----------------------------------CCCCCccCCHHHHHHHHHHcC-CeEEEEEec
Confidence 999998876 3221 112445689999999999997 999998887
Q ss_pred ecC
Q 017702 299 SQP 301 (367)
Q Consensus 299 ~~p 301 (367)
..+
T Consensus 208 ~~~ 210 (235)
T 3lcc_A 208 PHA 210 (235)
T ss_dssp TTC
T ss_pred CCc
Confidence 544
|
| >3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=99.08 E-value=3e-10 Score=105.47 Aligned_cols=189 Identities=15% Similarity=0.207 Sum_probs=114.3
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc-cccceeeccCc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH-ARKYFAAGLPG 139 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~-~~~~f~~gvp~ 139 (367)
.+..+|+|+|||+|..+..+.+ + ..+|+-.|+.. ........ .+-.|..+.
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~-------------------~---~~~v~gvD~s~----~~~~~a~~~~~~~~~~~d-- 84 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALAN-------------------Q---GLFVYAVEPSI----VMRQQAVVHPQVEWFTGY-- 84 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHT-------------------T---TCEEEEECSCH----HHHHSSCCCTTEEEECCC--
T ss_pred CCCCEEEEEcCcccHHHHHHHh-------------------C---CCEEEEEeCCH----HHHHHHHhccCCEEEECc--
Confidence 3458999999999999887751 2 23688888864 11221111 122344333
Q ss_pred cccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 140 SFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
+..--+|++++|+|+|..++||+. |+..+|+.-.+-|+ ||
T Consensus 85 -~~~~~~~~~~fD~v~~~~~l~~~~--------------------------------------~~~~~l~~~~~~Lk-gG 124 (261)
T 3ege_A 85 -AENLALPDKSVDGVISILAIHHFS--------------------------------------HLEKSFQEMQRIIR-DG 124 (261)
T ss_dssp -TTSCCSCTTCBSEEEEESCGGGCS--------------------------------------SHHHHHHHHHHHBC-SS
T ss_pred -hhhCCCCCCCEeEEEEcchHhhcc--------------------------------------CHHHHHHHHHHHhC-Cc
Confidence 334346789999999999999963 45578999999999 99
Q ss_pred eEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEEe
Q 017702 220 LMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLS 299 (367)
Q Consensus 220 ~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~~ 299 (367)
++++..+. .+... ..+....+. ..... ...++++.+++. ++++.| |++...+.+.
T Consensus 125 ~~~~~~~~-~~~~~---~~~~~~~~~---~~~~~----------------~~~~~~~~~~~~-~l~~aG-F~~v~~~~~~ 179 (261)
T 3ege_A 125 TIVLLTFD-IRLAQ---RIWLYDYFP---FLWED----------------ALRFLPLDEQIN-LLQENT-KRRVEAIPFL 179 (261)
T ss_dssp CEEEEEEC-GGGCC---CCGGGGTCH---HHHHH----------------HHTSCCHHHHHH-HHHHHH-CSEEEEEECC
T ss_pred EEEEEEcC-CchhH---HHHHHHHHH---HHhhh----------------hhhhCCCHHHHH-HHHHcC-CCceeEEEec
Confidence 98888876 33211 011111111 11100 012377899999 999986 9998888876
Q ss_pred cCCCCCC---------HHHHHHh-HHhhhhhhhhhccCHHHHHHHHHHHHHHHHh
Q 017702 300 QPRRRIT---------ANEYASG-IRAGIDGLIKKHFGDEFVDEIFNYFTTKVEE 344 (367)
Q Consensus 300 ~p~~~~~---------~~~v~~~-iRa~~~~~l~~~~~~~~~de~f~ry~~~~~~ 344 (367)
.|..+.+ +..+... .+...+.+ . .++++.++++.++..+.++.
T Consensus 180 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~e~~~~~~~~~~~l~~ 232 (261)
T 3ege_A 180 LPHDLSDLFAAAAWRRPELYLKAEVRAGISSF-A-LANQDLVEKGLELLTADLNN 232 (261)
T ss_dssp EETTCSBCCTTTTTTCGGGGGSHHHHHTSHHH-H-HSCHHHHHHHHHHHHHHHHT
T ss_pred CCCcCcchhhHHhccCchhhcCcchhccccce-e-ecCHHHHHHHHHHHHHHHhc
Confidence 6632211 1121111 12222222 2 35788888888888776653
|
| >3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=1.9e-09 Score=98.88 Aligned_cols=207 Identities=15% Similarity=0.101 Sum_probs=115.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC---Cc-cccceeecc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL---PH-ARKYFAAGL 137 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l---~~-~~~~f~~gv 137 (367)
...+|+|+|||+|..+..+.+.. + . +|+-.|+...-....-+.. .. .+-.|..+.
T Consensus 46 ~~~~vLDiG~G~G~~~~~l~~~~-----------------~---~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d 104 (257)
T 3f4k_A 46 DDAKIADIGCGTGGQTLFLADYV-----------------K---G-QITGIDLFPDFIEIFNENAVKANCADRVKGITGS 104 (257)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHC-----------------C---S-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECC
T ss_pred CCCeEEEeCCCCCHHHHHHHHhC-----------------C---C-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECC
Confidence 34699999999999998876322 2 2 5666676532221111111 11 112233333
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
+..--+|++++|+++|+.++||+. + ..+|+.-.+-|+|
T Consensus 105 ---~~~~~~~~~~fD~v~~~~~l~~~~--~-------------------------------------~~~l~~~~~~L~p 142 (257)
T 3f4k_A 105 ---MDNLPFQNEELDLIWSEGAIYNIG--F-------------------------------------ERGMNEWSKYLKK 142 (257)
T ss_dssp ---TTSCSSCTTCEEEEEEESCSCCCC--H-------------------------------------HHHHHHHHTTEEE
T ss_pred ---hhhCCCCCCCEEEEEecChHhhcC--H-------------------------------------HHHHHHHHHHcCC
Confidence 333335789999999999999962 1 2478888899999
Q ss_pred CceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEE
Q 017702 218 GGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEK 297 (367)
Q Consensus 218 GG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~ 297 (367)
||++++..+. ...... . ..+...|... .| ..++.+++.+++++.| |++.....
T Consensus 143 gG~l~~~~~~-~~~~~~-----~----~~~~~~~~~~---------------~~-~~~~~~~~~~~l~~aG-f~~v~~~~ 195 (257)
T 3f4k_A 143 GGFIAVSEAS-WFTSER-----P----AEIEDFWMDA---------------YP-EISVIPTCIDKMERAG-YTPTAHFI 195 (257)
T ss_dssp EEEEEEEEEE-ESSSCC-----C----HHHHHHHHHH---------------CT-TCCBHHHHHHHHHHTT-EEEEEEEE
T ss_pred CcEEEEEEee-ccCCCC-----h----HHHHHHHHHh---------------CC-CCCCHHHHHHHHHHCC-CeEEEEEE
Confidence 9999999865 222111 0 2223333321 01 1578999999999997 99988765
Q ss_pred EecC-CCCCCHHHHHHhHHhhhhhhhhhccCHHHHHHHHHHHHHHHHhhhhHHHHhcCCeEEEEEEEEec
Q 017702 298 LSQP-RRRITANEYASGIRAGIDGLIKKHFGDEFVDEIFNYFTTKVEENYSIIEEKIRNVSNLFISLKRF 366 (367)
Q Consensus 298 ~~~p-~~~~~~~~v~~~iRa~~~~~l~~~~~~~~~de~f~ry~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 366 (367)
.... +.......+.. ..+.+...+-++...+++.++.++....+ ..+ ....--.++++||+
T Consensus 196 ~~~~~w~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~g~~~~v~~k~ 257 (257)
T 3f4k_A 196 LPENCWTEHYFAPQDE----VRETFMKEHAGNKTAMDFMKGQQYERSLY-SKY---KDYYGYVFYIGQKR 257 (257)
T ss_dssp CCGGGTCCCCCHHHHH----HHHHHHHHHTTCHHHHHHHHHHHHHHHHH-HHH---TTTEEEEEEEEEEC
T ss_pred CChhhHHHHHHHHHHH----HHHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHh---CCccceEEEEEecC
Confidence 5432 11111112122 22222333334455566655555444332 221 22244556666764
|
| >1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=3.8e-08 Score=92.02 Aligned_cols=161 Identities=15% Similarity=0.186 Sum_probs=92.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC---c-cccceeecc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP---H-ARKYFAAGL 137 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~---~-~~~~f~~gv 137 (367)
...+|+|+|||+|..+..+.+.. + .+|+--|+..+-....-+.+. . .+--|..+.
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~-----------------~----~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d 122 (287)
T 1kpg_A 64 PGMTLLDVGCGWGATMMRAVEKY-----------------D----VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAG 122 (287)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH-----------------C----CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESC
T ss_pred CcCEEEEECCcccHHHHHHHHHc-----------------C----CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECC
Confidence 45799999999999988776322 1 146666664322221111111 0 112233333
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
+ .. +| +++|+|+|..++|++.. .|+..+|+.-.+-|+|
T Consensus 123 ---~-~~-~~-~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~Lkp 160 (287)
T 1kpg_A 123 ---W-EQ-FD-EPVDRIVSIGAFEHFGH------------------------------------ERYDAFFSLAHRLLPA 160 (287)
T ss_dssp ---G-GG-CC-CCCSEEEEESCGGGTCT------------------------------------TTHHHHHHHHHHHSCT
T ss_pred ---h-hh-CC-CCeeEEEEeCchhhcCh------------------------------------HHHHHHHHHHHHhcCC
Confidence 2 22 34 89999999999999642 1455789999999999
Q ss_pred CceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEE
Q 017702 218 GGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEK 297 (367)
Q Consensus 218 GG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~ 297 (367)
||++++..+. ..+.......+....+.. ..+.+..... +......|+.+++.+++++.| |++...+.
T Consensus 161 gG~l~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~---------~~~~~~~~s~~~~~~~l~~aG-f~~~~~~~ 227 (287)
T 1kpg_A 161 DGVMLLHTIT-GLHPKEIHERGLPMSFTF--ARFLKFIVTE---------IFPGGRLPSIPMVQECASANG-FTVTRVQS 227 (287)
T ss_dssp TCEEEEEEEE-ECCHHHHTTTTCSCHHHH--HHHHHHHHHH---------TSTTCCCCCHHHHHHHHHTTT-CEEEEEEE
T ss_pred CCEEEEEEec-CCCccccccccccccccc--cchhhhHHhe---------eCCCCCCCCHHHHHHHHHhCC-cEEEEEEe
Confidence 9999999987 443110000000000000 0011111110 111124679999999999997 99988875
Q ss_pred E
Q 017702 298 L 298 (367)
Q Consensus 298 ~ 298 (367)
+
T Consensus 228 ~ 228 (287)
T 1kpg_A 228 L 228 (287)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=99.06 E-value=1e-09 Score=100.26 Aligned_cols=143 Identities=13% Similarity=0.114 Sum_probs=93.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCccc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSF 141 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SF 141 (367)
+..+|+|+|||+|..+..+.+. . .+|+-.|+...-... .+.. --+..+ ..
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~~-----------------~-----~~v~gvD~s~~~~~~-a~~~----~~~~~~---d~ 90 (240)
T 3dli_A 41 GCRRVLDIGCGRGEFLELCKEE-----------------G-----IESIGVDINEDMIKF-CEGK----FNVVKS---DA 90 (240)
T ss_dssp TCSCEEEETCTTTHHHHHHHHH-----------------T-----CCEEEECSCHHHHHH-HHTT----SEEECS---CH
T ss_pred CCCeEEEEeCCCCHHHHHHHhC-----------------C-----CcEEEEECCHHHHHH-HHhh----cceeec---cH
Confidence 4579999999999988765421 0 136667775322111 1111 112222 22
Q ss_pred ccc--CCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 142 HSR--LFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 142 y~~--l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
..- -+|++++|+|+|+.++||+.. .|+..+|+...+-|+|||
T Consensus 91 ~~~~~~~~~~~fD~i~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~LkpgG 134 (240)
T 3dli_A 91 IEYLKSLPDKYLDGVMISHFVEHLDP------------------------------------ERLFELLSLCYSKMKYSS 134 (240)
T ss_dssp HHHHHTSCTTCBSEEEEESCGGGSCG------------------------------------GGHHHHHHHHHHHBCTTC
T ss_pred HHHhhhcCCCCeeEEEECCchhhCCc------------------------------------HHHHHHHHHHHHHcCCCc
Confidence 221 467899999999999999752 256679999999999999
Q ss_pred eEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEEe
Q 017702 220 LMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLS 299 (367)
Q Consensus 220 ~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~~ 299 (367)
++++..++ ... ... +.+ .. + .....++++.+++.+++++.| |++...+.+.
T Consensus 135 ~l~~~~~~-~~~-----------~~~-----~~~---~~-~-------~~~~~~~~~~~~l~~~l~~aG-f~~~~~~~~~ 185 (240)
T 3dli_A 135 YIVIESPN-PTS-----------LYS-----LIN---FY-I-------DPTHKKPVHPETLKFILEYLG-FRDVKIEFFE 185 (240)
T ss_dssp CEEEEEEC-TTS-----------HHH-----HHH---HT-T-------STTCCSCCCHHHHHHHHHHHT-CEEEEEEEEC
T ss_pred EEEEEeCC-cch-----------hHH-----HHH---Hh-c-------CccccccCCHHHHHHHHHHCC-CeEEEEEEec
Confidence 99999887 322 111 111 00 1 112245678999999999997 9998888774
|
| >4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.05 E-value=1.7e-09 Score=101.24 Aligned_cols=163 Identities=17% Similarity=0.260 Sum_probs=98.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc----cccceeecc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH----ARKYFAAGL 137 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~----~~~~f~~gv 137 (367)
+..+|+|+|||+|..+..+... ..+|+-.|+...-....-+.+.. .+--|..+.
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~----------------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d 125 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER----------------------GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCA 125 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT----------------------TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESC
T ss_pred CCCEEEEeCCcchHHHHHHHHC----------------------CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcC
Confidence 3579999999999988877521 12566667653222221111111 112244443
Q ss_pred CccccccC-CCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhc
Q 017702 138 PGSFHSRL-FPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELV 216 (367)
Q Consensus 138 p~SFy~~l-~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~ 216 (367)
+.+.. ++++++|+|+++.++||+. |...+|+.-++-|+
T Consensus 126 ---~~~~~~~~~~~fD~v~~~~~l~~~~--------------------------------------~~~~~l~~~~~~Lk 164 (285)
T 4htf_A 126 ---AQDVASHLETPVDLILFHAVLEWVA--------------------------------------DPRSVLQTLWSVLR 164 (285)
T ss_dssp ---GGGTGGGCSSCEEEEEEESCGGGCS--------------------------------------CHHHHHHHHHHTEE
T ss_pred ---HHHhhhhcCCCceEEEECchhhccc--------------------------------------CHHHHHHHHHHHcC
Confidence 23323 5789999999999999964 23358899999999
Q ss_pred cCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEE
Q 017702 217 PGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKME 296 (367)
Q Consensus 217 pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE 296 (367)
|||++++.... .... .....+...|.. ...+.... ......+.++.+.+++.+++++.| |+++..+
T Consensus 165 pgG~l~~~~~~-~~~~---------~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~aG-f~v~~~~ 230 (285)
T 4htf_A 165 PGGVLSLMFYN-AHGL---------LMHNMVAGNFDY-VQAGMPKK--KKRTLSPDYPRDPTQVYLWLEEAG-WQIMGKT 230 (285)
T ss_dssp EEEEEEEEEEB-HHHH---------HHHHHHTTCHHH-HHTTCCCC------CCCSCCBCHHHHHHHHHHTT-CEEEEEE
T ss_pred CCeEEEEEEeC-CchH---------HHHHHHhcCHHH-Hhhhcccc--ccccCCCCCCCCHHHHHHHHHHCC-Cceeeee
Confidence 99999999987 3210 000111111221 11222111 011224567789999999999997 9999988
Q ss_pred EEecC
Q 017702 297 KLSQP 301 (367)
Q Consensus 297 ~~~~p 301 (367)
.+...
T Consensus 231 ~~~~~ 235 (285)
T 4htf_A 231 GVRVF 235 (285)
T ss_dssp EESSS
T ss_pred eEEEe
Confidence 87554
|
| >2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=1.2e-09 Score=103.12 Aligned_cols=160 Identities=13% Similarity=0.158 Sum_probs=92.7
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC---cccc-ce--e
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP---HARK-YF--A 134 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~---~~~~-~f--~ 134 (367)
....+|+|+|||+|..|..++..+. .++. .. .+.++..|...+-....-+.+. ...+ -| .
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~----~~~~-------~~---~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~ 116 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQ----AQYP-------GV---CINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWH 116 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHH----HHST-------TC---EEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHH----hhCC-------Cc---eeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEE
Confidence 3468999999999988776664442 1110 11 3344778876533222111111 0011 11 1
Q ss_pred eccCccccc---cCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHH
Q 017702 135 AGLPGSFHS---RLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNAR 211 (367)
Q Consensus 135 ~gvp~SFy~---~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~R 211 (367)
.+..-.+-. +-++++++|+|+|+.++||+. |+..+|+.-
T Consensus 117 ~~~~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~--------------------------------------d~~~~l~~~ 158 (292)
T 2aot_A 117 KETSSEYQSRMLEKKELQKWDFIHMIQMLYYVK--------------------------------------DIPATLKFF 158 (292)
T ss_dssp CSCHHHHHHHHHTTTCCCCEEEEEEESCGGGCS--------------------------------------CHHHHHHHH
T ss_pred ecchhhhhhhhccccCCCceeEEEEeeeeeecC--------------------------------------CHHHHHHHH
Confidence 221111111 115689999999999999965 444688999
Q ss_pred HHhhccCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceE
Q 017702 212 AEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFT 291 (367)
Q Consensus 212 a~EL~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~ 291 (367)
++-|||||+|++.... .+. . +. ..|..... . +.. .....+++.+++.+++++.| |+
T Consensus 159 ~r~LkpgG~l~i~~~~-~~~----------~-~~---~~~~~~~~-~-~~~------~~~~~~~~~~~~~~~l~~aG-f~ 214 (292)
T 2aot_A 159 HSLLGTNAKMLIIVVS-GSS----------G-WD---KLWKKYGS-R-FPQ------DDLCQYITSDDLTQMLDNLG-LK 214 (292)
T ss_dssp HHTEEEEEEEEEEEEC-TTS----------H-HH---HHHHHHGG-G-SCC------CTTCCCCCHHHHHHHHHHHT-CC
T ss_pred HHHcCCCcEEEEEEec-CCc----------c-HH---HHHHHHHH-h-ccC------CCcccCCCHHHHHHHHHHCC-Cc
Confidence 9999999999999765 321 0 11 11222111 0 000 01235689999999999997 98
Q ss_pred EeEEE
Q 017702 292 IEKME 296 (367)
Q Consensus 292 I~~lE 296 (367)
+...+
T Consensus 215 ~~~~~ 219 (292)
T 2aot_A 215 YECYD 219 (292)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 87643
|
| >3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str} | Back alignment and structure |
|---|
Probab=99.05 E-value=2.1e-09 Score=98.70 Aligned_cols=170 Identities=13% Similarity=0.159 Sum_probs=97.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCccc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSF 141 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SF 141 (367)
...+|+|+|||+|..+..+.+. .+ . +|+.-|+...-....-+.....+-.|..+. +
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~-----------------~~---~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d---~ 99 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEH-----------------GA---K-KVLGIDLSERMLTEAKRKTTSPVVCYEQKA---I 99 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-----------------TC---S-EEEEEESCHHHHHHHHHHCCCTTEEEEECC---G
T ss_pred CCCEEEEECCCCCHHHHHHHHc-----------------CC---C-EEEEEECCHHHHHHHHHhhccCCeEEEEcc---h
Confidence 5689999999999988877521 12 2 577777754222222222221222344433 3
Q ss_pred cccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceE
Q 017702 142 HSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLM 221 (367)
Q Consensus 142 y~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~l 221 (367)
..--+|++++|+|+++.++||+. |...+|+.-.+-|+|||++
T Consensus 100 ~~~~~~~~~fD~v~~~~~l~~~~--------------------------------------~~~~~l~~~~~~LkpgG~l 141 (253)
T 3g5l_A 100 EDIAIEPDAYNVVLSSLALHYIA--------------------------------------SFDDICKKVYINLKSSGSF 141 (253)
T ss_dssp GGCCCCTTCEEEEEEESCGGGCS--------------------------------------CHHHHHHHHHHHEEEEEEE
T ss_pred hhCCCCCCCeEEEEEchhhhhhh--------------------------------------hHHHHHHHHHHHcCCCcEE
Confidence 33346789999999999999973 3446899999999999999
Q ss_pred EEEeecccCCCCCC------CCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEE
Q 017702 222 VLILAAVVPDGIPL------SNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKM 295 (367)
Q Consensus 222 vl~~~g~~~n~~~~------~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~l 295 (367)
++.... ....... ...+....+. +.....++... ..+..-....|.+|.+++.++++++| |+++.+
T Consensus 142 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~~~t~~~~~~~l~~aG-F~~~~~ 213 (253)
T 3g5l_A 142 IFSVEH-PVFTADGRQDWYTDETGNKLHWP-----VDRYFNESMRT-SHFLGEDVQKYHRTVTTYIQTLLKNG-FQINSV 213 (253)
T ss_dssp EEEEEC-HHHHSSSSCSCEECSSCCEEEEE-----ECCTTCCCEEE-EEETTEEEEEECCCHHHHHHHHHHTT-EEEEEE
T ss_pred EEEeCC-CccccCccccceeccCCceEEEE-----eccccccceEE-EeeccccCccEecCHHHHHHHHHHcC-Ceeeee
Confidence 998764 1100000 0000000000 00000001000 00001134456779999999999997 999988
Q ss_pred EEEecC
Q 017702 296 EKLSQP 301 (367)
Q Consensus 296 E~~~~p 301 (367)
+....+
T Consensus 214 ~e~~~~ 219 (253)
T 3g5l_A 214 IEPEPA 219 (253)
T ss_dssp ECCCCC
T ss_pred ecCCCc
Confidence 765433
|
| >3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=2.8e-08 Score=92.01 Aligned_cols=149 Identities=18% Similarity=0.134 Sum_probs=95.1
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC---Cc-cccceeec
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL---PH-ARKYFAAG 136 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l---~~-~~~~f~~g 136 (367)
....+|+|+|||+|..+..+.+ .+ ..+|+--|+...-....-+.+ .. .+--|..+
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~------------------~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~ 103 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAG------------------HV---TGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVG 103 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHT------------------TC---SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEEC
T ss_pred CCCCEEEEeCCCCCHHHHHHHh------------------cc---CCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEc
Confidence 3468999999999999987762 12 236777777543222211111 11 11224443
Q ss_pred cCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhc
Q 017702 137 LPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELV 216 (367)
Q Consensus 137 vp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~ 216 (367)
. +.+-.+|++++|+|+|+.++|++ . +..+|+.-.+-|+
T Consensus 104 d---~~~~~~~~~~fD~i~~~~~~~~~-~--------------------------------------~~~~l~~~~~~Lk 141 (267)
T 3kkz_A 104 S---MDDLPFRNEELDLIWSEGAIYNI-G--------------------------------------FERGLNEWRKYLK 141 (267)
T ss_dssp C---TTSCCCCTTCEEEEEESSCGGGT-C--------------------------------------HHHHHHHHGGGEE
T ss_pred C---hhhCCCCCCCEEEEEEcCCceec-C--------------------------------------HHHHHHHHHHHcC
Confidence 3 33333578999999999999996 2 1247888889999
Q ss_pred cCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEE
Q 017702 217 PGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKME 296 (367)
Q Consensus 217 pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE 296 (367)
|||++++..+. ...... . ..+...|.+ . .| .+++.+++.+++++.| |++...+
T Consensus 142 pgG~l~~~~~~-~~~~~~-----~----~~~~~~~~~----~-----------~~-~~~~~~~~~~~l~~aG-f~~v~~~ 194 (267)
T 3kkz_A 142 KGGYLAVSECS-WFTDER-----P----AEINDFWMD----A-----------YP-EIDTIPNQVAKIHKAG-YLPVATF 194 (267)
T ss_dssp EEEEEEEEEEE-ESSSCC-----C----HHHHHHHHH----H-----------CT-TCEEHHHHHHHHHHTT-EEEEEEE
T ss_pred CCCEEEEEEee-ecCCCC-----h----HHHHHHHHH----h-----------CC-CCCCHHHHHHHHHHCC-CEEEEEE
Confidence 99999999875 322111 0 222333331 0 12 3679999999999997 9998886
Q ss_pred EEe
Q 017702 297 KLS 299 (367)
Q Consensus 297 ~~~ 299 (367)
.+.
T Consensus 195 ~~~ 197 (267)
T 3kkz_A 195 ILP 197 (267)
T ss_dssp ECC
T ss_pred ECC
Confidence 654
|
| >2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A | Back alignment and structure |
|---|
Probab=99.04 E-value=2.7e-09 Score=96.61 Aligned_cols=153 Identities=14% Similarity=0.122 Sum_probs=94.0
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCcccc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSFH 142 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SFy 142 (367)
..+|+|+|||+|..+..+.+. .+ +|+-.|+...-....-+..+. +--|..+. .
T Consensus 43 ~~~vLDiGcG~G~~~~~l~~~-----------------~~-----~v~gvD~s~~~~~~a~~~~~~-~v~~~~~d----~ 95 (250)
T 2p7i_A 43 PGNLLELGSFKGDFTSRLQEH-----------------FN-----DITCVEASEEAISHAQGRLKD-GITYIHSR----F 95 (250)
T ss_dssp SSCEEEESCTTSHHHHHHTTT-----------------CS-----CEEEEESCHHHHHHHHHHSCS-CEEEEESC----G
T ss_pred CCcEEEECCCCCHHHHHHHHh-----------------CC-----cEEEEeCCHHHHHHHHHhhhC-CeEEEEcc----H
Confidence 458999999999988866411 12 466667654322222222222 22344443 2
Q ss_pred ccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHH-HhhccCceE
Q 017702 143 SRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARA-EELVPGGLM 221 (367)
Q Consensus 143 ~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra-~EL~pGG~l 221 (367)
..++|++++|+|+++.++|++. |...+|+.-+ +-|+|||+|
T Consensus 96 ~~~~~~~~fD~v~~~~~l~~~~--------------------------------------~~~~~l~~~~~~~LkpgG~l 137 (250)
T 2p7i_A 96 EDAQLPRRYDNIVLTHVLEHID--------------------------------------DPVALLKRINDDWLAEGGRL 137 (250)
T ss_dssp GGCCCSSCEEEEEEESCGGGCS--------------------------------------SHHHHHHHHHHTTEEEEEEE
T ss_pred HHcCcCCcccEEEEhhHHHhhc--------------------------------------CHHHHHHHHHHHhcCCCCEE
Confidence 3346889999999999999964 2335888889 999999999
Q ss_pred EEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhh----hhccCCCcccCCHHHHHHHHHhCCceEEeEEEE
Q 017702 222 VLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEK----VDSFNLPTYNATPKELEAIIRTNGNFTIEKMEK 297 (367)
Q Consensus 222 vl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~----~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~ 297 (367)
++..+. .... ..... . ..|...... .+.......+.+.+++.+++++.| |++.+.+.
T Consensus 138 ~i~~~~-~~~~-----------~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~ 198 (250)
T 2p7i_A 138 FLVCPN-ANAV-----------SRQIA-V-----KMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAG-LQVTYRSG 198 (250)
T ss_dssp EEEEEC-TTCH-----------HHHHH-H-----HTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTT-CEEEEEEE
T ss_pred EEEcCC-hHHH-----------HHHHH-H-----HcCccccchhcccccccccccccCCHHHHHHHHHHCC-CeEEEEee
Confidence 999876 3220 11110 0 112221110 000111223579999999999997 99998876
Q ss_pred Ee
Q 017702 298 LS 299 (367)
Q Consensus 298 ~~ 299 (367)
+.
T Consensus 199 ~~ 200 (250)
T 2p7i_A 199 IF 200 (250)
T ss_dssp EE
T ss_pred eE
Confidence 54
|
| >3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei} | Back alignment and structure |
|---|
Probab=99.03 E-value=1.4e-09 Score=97.83 Aligned_cols=171 Identities=16% Similarity=0.146 Sum_probs=101.7
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCcc--------ccce
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHA--------RKYF 133 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~--------~~~f 133 (367)
+..+|+|+|||+|..+..+.+. ..+++.-|+...-....-+.+... +--|
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~----------------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~ 87 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASK----------------------GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEF 87 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT----------------------TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHhC----------------------CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEE
Confidence 4579999999999998877521 125677777543222222222211 1123
Q ss_pred eeccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHH
Q 017702 134 AAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAE 213 (367)
Q Consensus 134 ~~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~ 213 (367)
..+. +..-.++++++|+++++.++|++.+. .++..+|+.-.+
T Consensus 88 ~~~d---~~~~~~~~~~~D~v~~~~~l~~~~~~-----------------------------------~~~~~~l~~~~~ 129 (235)
T 3sm3_A 88 KVEN---ASSLSFHDSSFDFAVMQAFLTSVPDP-----------------------------------KERSRIIKEVFR 129 (235)
T ss_dssp EECC---TTSCCSCTTCEEEEEEESCGGGCCCH-----------------------------------HHHHHHHHHHHH
T ss_pred EEec---ccccCCCCCceeEEEEcchhhcCCCH-----------------------------------HHHHHHHHHHHH
Confidence 3333 33334678999999999999996532 134468888899
Q ss_pred hhccCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhc--cCCCcccCCHHHHHHHHHhCCceE
Q 017702 214 ELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDS--FNLPTYNATPKELEAIIRTNGNFT 291 (367)
Q Consensus 214 EL~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~--f~~P~y~~s~eE~~~~l~~~g~F~ 291 (367)
-|+|||++++..++ ..... ..+.......+......|......... .....++++.+|++++++++| |+
T Consensus 130 ~L~pgG~l~~~~~~-~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aG-f~ 200 (235)
T 3sm3_A 130 VLKPGAYLYLVEFG-QNWHL-------KLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFTEKELVFLLTDCR-FE 200 (235)
T ss_dssp HEEEEEEEEEEEEB-CCTTS-------HHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBCHHHHHHHHHTTT-EE
T ss_pred HcCCCeEEEEEECC-cchhH-------HHHHHHhhhhccchhhhcceEecccccCCcceeeEeCCHHHHHHHHHHcC-CE
Confidence 99999999999988 43221 111111222222221222110000000 012346789999999999997 99
Q ss_pred EeEEEEEecC
Q 017702 292 IEKMEKLSQP 301 (367)
Q Consensus 292 I~~lE~~~~p 301 (367)
+..++....+
T Consensus 201 ~~~~~~~~~~ 210 (235)
T 3sm3_A 201 IDYFRVKELE 210 (235)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEEeccee
Confidence 9998876543
|
| >3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=99.03 E-value=1.1e-09 Score=97.02 Aligned_cols=142 Identities=15% Similarity=0.078 Sum_probs=96.1
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCcccc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSFH 142 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SFy 142 (367)
..+|+|+|||+|..+..+... ..+++--|+...-....-+..+ +--|..+ ++.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~----------------------~~~v~gvD~s~~~~~~a~~~~~--~~~~~~~---d~~ 94 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL----------------------GHQIEGLEPATRLVELARQTHP--SVTFHHG---TIT 94 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT----------------------TCCEEEECCCHHHHHHHHHHCT--TSEEECC---CGG
T ss_pred CCeEEEecCCCCHHHHHHHhc----------------------CCeEEEEeCCHHHHHHHHHhCC--CCeEEeC---ccc
Confidence 478999999999988877521 1146666765322111111111 1223333 344
Q ss_pred ccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEE
Q 017702 143 SRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMV 222 (367)
Q Consensus 143 ~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lv 222 (367)
+--+|++++|+++++.++||+.. .|...+|+.-++-|+|||+++
T Consensus 95 ~~~~~~~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~L~pgG~l~ 138 (203)
T 3h2b_A 95 DLSDSPKRWAGLLAWYSLIHMGP------------------------------------GELPDALVALRMAVEDGGGLL 138 (203)
T ss_dssp GGGGSCCCEEEEEEESSSTTCCT------------------------------------TTHHHHHHHHHHTEEEEEEEE
T ss_pred ccccCCCCeEEEEehhhHhcCCH------------------------------------HHHHHHHHHHHHHcCCCcEEE
Confidence 43467899999999999999641 155678999999999999999
Q ss_pred EEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEEe
Q 017702 223 LILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLS 299 (367)
Q Consensus 223 l~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~~ 299 (367)
+..+. .+... .+.....+.++.+.+++++++++.| |++..++.+.
T Consensus 139 i~~~~-~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~ 183 (203)
T 3h2b_A 139 MSFFS-GPSLE------------------------------PMYHPVATAYRWPLPELAQALETAG-FQVTSSHWDP 183 (203)
T ss_dssp EEEEC-CSSCE------------------------------EECCSSSCEEECCHHHHHHHHHHTT-EEEEEEEECT
T ss_pred EEEcc-CCchh------------------------------hhhchhhhhccCCHHHHHHHHHHCC-CcEEEEEecC
Confidence 99987 33211 0112233567889999999999997 9999988764
|
| >4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=5.2e-09 Score=97.99 Aligned_cols=162 Identities=19% Similarity=0.280 Sum_probs=93.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHH---hhcCCcc-ccceeecc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTL---FKSLPHA-RKYFAAGL 137 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~l---f~~l~~~-~~~f~~gv 137 (367)
..-+|+|+|||+|..|+.+.+.+ . .| ..+|+--|+...--... +...... +--|..|.
T Consensus 70 ~~~~vLDlGcGtG~~~~~la~~~--------~-------~~---~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D 131 (261)
T 4gek_A 70 PGTQVYDLGCSLGAATLSVRRNI--------H-------HD---NCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGD 131 (261)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTC--------C-------SS---SCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESC
T ss_pred CCCEEEEEeCCCCHHHHHHHHhc--------C-------CC---CCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecc
Confidence 34799999999999998876332 0 23 45677777754221111 1111111 12244443
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
+. . +|..++|+++|++++||+.. .|...+|+.-++-|+|
T Consensus 132 ---~~-~-~~~~~~d~v~~~~~l~~~~~------------------------------------~~~~~~l~~i~~~Lkp 170 (261)
T 4gek_A 132 ---IR-D-IAIENASMVVLNFTLQFLEP------------------------------------SERQALLDKIYQGLNP 170 (261)
T ss_dssp ---TT-T-CCCCSEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHEEE
T ss_pred ---cc-c-ccccccccceeeeeeeecCc------------------------------------hhHhHHHHHHHHHcCC
Confidence 22 2 35567999999999999641 2556789999999999
Q ss_pred CceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHH-HcCCCCHhhhh----ccCCCcccCCHHHHHHHHHhCCceEE
Q 017702 218 GGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLA-KMGVLSEEKVD----SFNLPTYNATPKELEAIIRTNGNFTI 292 (367)
Q Consensus 218 GG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~-~eG~i~~~~~d----~f~~P~y~~s~eE~~~~l~~~g~F~I 292 (367)
||+|++.-.. .... ....+.+.+.+.+.. ..|. ++.++. .....+...|.+|++++|++.| |+-
T Consensus 171 GG~lii~e~~-~~~~--------~~~~~~~~~~~~~~~~~~g~-s~~ei~~~~~~l~~~~~~~s~~~~~~~L~~AG-F~~ 239 (261)
T 4gek_A 171 GGALVLSEKF-SFED--------AKVGELLFNMHHDFKRANGY-SELEISQKRSMLENVMLTDSVETHKARLHKAG-FEH 239 (261)
T ss_dssp EEEEEEEEEB-CCSS--------HHHHHHHHHHHHHHHHHTTG-GGSTTHHHHHHHHHHCCCBCHHHHHHHHHHHT-CSE
T ss_pred CcEEEEEecc-CCCC--------HHHHHHHHHHHHHHHHHcCC-CHHHHHHHHhhhcccccCCCHHHHHHHHHHcC-CCe
Confidence 9999987665 3321 111122333333322 2332 122111 1111223468999999999997 864
Q ss_pred e
Q 017702 293 E 293 (367)
Q Consensus 293 ~ 293 (367)
.
T Consensus 240 v 240 (261)
T 4gek_A 240 S 240 (261)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=99.01 E-value=5e-09 Score=95.06 Aligned_cols=151 Identities=16% Similarity=0.195 Sum_probs=96.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCccc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSF 141 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SF 141 (367)
...+|+|+|||+|..+..+.+. ..+++--|+...-....-+.....+-.|..+. +
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~----------------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d---~ 107 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRT----------------------GYKAVGVDISEVMIQKGKERGEGPDLSFIKGD---L 107 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT----------------------TCEEEEEESCHHHHHHHHTTTCBTTEEEEECB---T
T ss_pred CCCeEEEEcCCCCHHHHHHHHc----------------------CCeEEEEECCHHHHHHHHhhcccCCceEEEcc---h
Confidence 3469999999999988877521 12566767653222211111111222344433 3
Q ss_pred cccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceE
Q 017702 142 HSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLM 221 (367)
Q Consensus 142 y~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~l 221 (367)
.+--+|++++|+++++.++||+. |...+|+.-.+-|+|||++
T Consensus 108 ~~~~~~~~~fD~v~~~~~l~~~~--------------------------------------~~~~~l~~~~~~L~pgG~l 149 (242)
T 3l8d_A 108 SSLPFENEQFEAIMAINSLEWTE--------------------------------------EPLRALNEIKRVLKSDGYA 149 (242)
T ss_dssp TBCSSCTTCEEEEEEESCTTSSS--------------------------------------CHHHHHHHHHHHEEEEEEE
T ss_pred hcCCCCCCCccEEEEcChHhhcc--------------------------------------CHHHHHHHHHHHhCCCeEE
Confidence 34446789999999999999963 2335888889999999999
Q ss_pred EEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEEecC
Q 017702 222 VLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLSQP 301 (367)
Q Consensus 222 vl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~~~p 301 (367)
++...+ ...... . . .+.. .........+.+++++.+++++.| |++...+.+..+
T Consensus 150 ~i~~~~-~~~~~~-~--------~----~~~~-----------~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~~~ 203 (242)
T 3l8d_A 150 CIAILG-PTAKPR-E--------N----SYPR-----------LYGKDVVCNTMMPWEFEQLVKEQG-FKVVDGIGVYKR 203 (242)
T ss_dssp EEEEEC-TTCGGG-G--------G----GGGG-----------GGTCCCSSCCCCHHHHHHHHHHTT-EEEEEEEEEECT
T ss_pred EEEEcC-Ccchhh-h--------h----hhhh-----------hccccccccCCCHHHHHHHHHHcC-CEEEEeeccccc
Confidence 999987 332110 0 0 0000 111233455689999999999997 999988866544
|
| >3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=3.5e-09 Score=94.27 Aligned_cols=156 Identities=15% Similarity=0.105 Sum_probs=92.5
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCcccc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSFH 142 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SFy 142 (367)
..+|+|+|||+|..+..+... ..+++--|+...-. ...+.....+-.|..+. +.
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~----------------------~~~v~~~D~s~~~~-~~a~~~~~~~~~~~~~d---~~ 100 (218)
T 3ou2_A 47 RGDVLELASGTGYWTRHLSGL----------------------ADRVTALDGSAEMI-AEAGRHGLDNVEFRQQD---LF 100 (218)
T ss_dssp CSEEEEESCTTSHHHHHHHHH----------------------SSEEEEEESCHHHH-HHHGGGCCTTEEEEECC---TT
T ss_pred CCeEEEECCCCCHHHHHHHhc----------------------CCeEEEEeCCHHHH-HHHHhcCCCCeEEEecc---cc
Confidence 359999999999988877522 01466667653221 11222111122344443 33
Q ss_pred ccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEE
Q 017702 143 SRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMV 222 (367)
Q Consensus 143 ~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lv 222 (367)
.++|++++|+++++.++||+.+ .++..+|+.-.+-|+|||+++
T Consensus 101 -~~~~~~~~D~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~L~pgG~l~ 143 (218)
T 3ou2_A 101 -DWTPDRQWDAVFFAHWLAHVPD------------------------------------DRFEAFWESVRSAVAPGGVVE 143 (218)
T ss_dssp -SCCCSSCEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHEEEEEEEE
T ss_pred -cCCCCCceeEEEEechhhcCCH------------------------------------HHHHHHHHHHHHHcCCCeEEE
Confidence 3388999999999999999652 135578999999999999999
Q ss_pred EEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcC---CCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEE
Q 017702 223 LILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMG---VLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKL 298 (367)
Q Consensus 223 l~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG---~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~ 298 (367)
+...+ ++... +...+....... .+.. -..+.....+++.+|+.+++++.| |+++..+..
T Consensus 144 ~~~~~-~~~~~-------------~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~~~ 205 (218)
T 3ou2_A 144 FVDVT-DHERR-------------LEQQDDSEPEVAVRRTLQD--GRSFRIVKVFRSPAELTERLTALG-WSCSVDEVH 205 (218)
T ss_dssp EEEEC-CCC-------------------------CEEEEECTT--SCEEEEECCCCCHHHHHHHHHHTT-EEEEEEEEE
T ss_pred EEeCC-CCccc-------------cchhhhcccccceeeecCC--cchhhHhhcCCCHHHHHHHHHHCC-CEEEeeecc
Confidence 99988 53311 000111000000 0000 000111123679999999999997 998776654
|
| >3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.01 E-value=3.7e-09 Score=94.63 Aligned_cols=142 Identities=14% Similarity=0.182 Sum_probs=94.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC---CccccceeeccC
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL---PHARKYFAAGLP 138 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l---~~~~~~f~~gvp 138 (367)
...+|+|+|||+|..+..+.+.. .| ..+++.-|....-....-+.+ ...+-.|..+.
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~----------------~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d- 96 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLSKMV----------------GE---KGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSE- 96 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHHHHH----------------TT---TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECB-
T ss_pred CCCEEEEEecCCCHHHHHHHHHh----------------CC---CcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecc-
Confidence 45799999999999999886433 12 346788887543222211111 11122233333
Q ss_pred ccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccC
Q 017702 139 GSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPG 218 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 218 (367)
+..-.++++++|+++++.++||+. |...+|+.-.+-|+||
T Consensus 97 --~~~~~~~~~~fD~v~~~~~l~~~~--------------------------------------~~~~~l~~~~~~Lkpg 136 (219)
T 3dh0_A 97 --ENKIPLPDNTVDFIFMAFTFHELS--------------------------------------EPLKFLEELKRVAKPF 136 (219)
T ss_dssp --TTBCSSCSSCEEEEEEESCGGGCS--------------------------------------SHHHHHHHHHHHEEEE
T ss_pred --cccCCCCCCCeeEEEeehhhhhcC--------------------------------------CHHHHHHHHHHHhCCC
Confidence 334447889999999999999964 2345888888999999
Q ss_pred ceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEE
Q 017702 219 GLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKL 298 (367)
Q Consensus 219 G~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~ 298 (367)
|++++.... ...... + .....+.+.+++++++++.| |++.+.+.+
T Consensus 137 G~l~i~~~~-~~~~~~-----------------------~----------~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~ 181 (219)
T 3dh0_A 137 AYLAIIDWK-KEERDK-----------------------G----------PPPEEVYSEWEVGLILEDAG-IRVGRVVEV 181 (219)
T ss_dssp EEEEEEEEC-SSCCSS-----------------------S----------CCGGGSCCHHHHHHHHHHTT-CEEEEEEEE
T ss_pred eEEEEEEec-cccccc-----------------------C----------CchhcccCHHHHHHHHHHCC-CEEEEEEee
Confidence 999998876 333210 0 01123568999999999997 998887664
|
| >1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42 | Back alignment and structure |
|---|
Probab=98.99 E-value=2.4e-09 Score=97.98 Aligned_cols=146 Identities=12% Similarity=0.155 Sum_probs=93.7
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc-cccceeeccCc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH-ARKYFAAGLPG 139 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~-~~~~f~~gvp~ 139 (367)
....+|+|+|||+|..+..+.+.. . . +++.-|....-....-+.+.. .+--|..+
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~-----------------~---~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~--- 147 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKL-----------------Y---A-TTDLLEPVKHMLEEAKRELAGMPVGKFILA--- 147 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHH-----------------C---S-EEEEEESCHHHHHHHHHHTTTSSEEEEEES---
T ss_pred cCCCEEEEECCCcCHHHHHHHHhh-----------------c---C-EEEEEeCCHHHHHHHHHHhccCCceEEEEc---
Confidence 346899999999999998776432 0 1 355666543222222122211 11223333
Q ss_pred cccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 140 SFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
++..--+|++++|+++++.++|+++. .|+..+|+...+-|+|||
T Consensus 148 d~~~~~~~~~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~LkpgG 191 (254)
T 1xtp_A 148 SMETATLPPNTYDLIVIQWTAIYLTD------------------------------------ADFVKFFKHCQQALTPNG 191 (254)
T ss_dssp CGGGCCCCSSCEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHEEEEE
T ss_pred cHHHCCCCCCCeEEEEEcchhhhCCH------------------------------------HHHHHHHHHHHHhcCCCe
Confidence 33333457789999999999999642 256679999999999999
Q ss_pred eEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEE
Q 017702 220 LMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKL 298 (367)
Q Consensus 220 ~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~ 298 (367)
++++.... ...... ......+.++++.+++++++++.| |++.+.+..
T Consensus 192 ~l~i~~~~-~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~ 238 (254)
T 1xtp_A 192 YIFFKENC-STGDRF------------------------------LVDKEDSSLTRSDIHYKRLFNESG-VRVVKEAFQ 238 (254)
T ss_dssp EEEEEEEB-C--CCE------------------------------EEETTTTEEEBCHHHHHHHHHHHT-CCEEEEEEC
T ss_pred EEEEEecC-CCcccc------------------------------eecccCCcccCCHHHHHHHHHHCC-CEEEEeeec
Confidence 99998875 222100 000122345679999999999997 999887664
|
| >3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=98.98 E-value=3.2e-09 Score=94.72 Aligned_cols=142 Identities=19% Similarity=0.176 Sum_probs=94.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCccc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSF 141 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SF 141 (367)
...+|+|+|||+|..+..+.+. ..+++--|+...-....-+.. +..+..+ ++
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~----------------------~~~v~~vD~s~~~~~~a~~~~---~~~~~~~---d~ 94 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAMLAA----------------------GFDVDATDGSPELAAEASRRL---GRPVRTM---LF 94 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHHHT----------------------TCEEEEEESCHHHHHHHHHHH---TSCCEEC---CG
T ss_pred CCCcEEEECCCCCHHHHHHHHc----------------------CCeEEEECCCHHHHHHHHHhc---CCceEEe---ee
Confidence 3579999999999998877521 125667777532222211111 1122222 23
Q ss_pred cccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceE
Q 017702 142 HSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLM 221 (367)
Q Consensus 142 y~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~l 221 (367)
. .+.+++++|+++++.++|++.. .|+..+|+.-++-|+|||++
T Consensus 95 ~-~~~~~~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~LkpgG~l 137 (211)
T 3e23_A 95 H-QLDAIDAYDAVWAHACLLHVPR------------------------------------DELADVLKLIWRALKPGGLF 137 (211)
T ss_dssp G-GCCCCSCEEEEEECSCGGGSCH------------------------------------HHHHHHHHHHHHHEEEEEEE
T ss_pred c-cCCCCCcEEEEEecCchhhcCH------------------------------------HHHHHHHHHHHHhcCCCcEE
Confidence 3 3348899999999999999641 26667999999999999999
Q ss_pred EEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEEec
Q 017702 222 VLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLSQ 300 (367)
Q Consensus 222 vl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~~~ 300 (367)
++.+.. ..... .+.+...+.+.+.+++++++++.|.|++..++....
T Consensus 138 ~~~~~~-~~~~~-------------------------------~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~~~ 184 (211)
T 3e23_A 138 YASYKS-GEGEG-------------------------------RDKLARYYNYPSEEWLRARYAEAGTWASVAVESSEG 184 (211)
T ss_dssp EEEEEC-CSSCE-------------------------------ECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEEEE
T ss_pred EEEEcC-CCccc-------------------------------ccccchhccCCCHHHHHHHHHhCCCcEEEEEEeccC
Confidence 999875 22210 011223445789999999999984499988877543
|
| >1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21 | Back alignment and structure |
|---|
Probab=98.97 E-value=4.1e-09 Score=96.60 Aligned_cols=147 Identities=14% Similarity=0.023 Sum_probs=88.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHH---hhcCCc-cccceeecc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTL---FKSLPH-ARKYFAAGL 137 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~l---f~~l~~-~~~~f~~gv 137 (367)
...+|+|+|||+|..+..+.+.. ..+++--|+...-.... +..... .+--|..+
T Consensus 36 ~~~~VLDiGcG~G~~~~~la~~~---------------------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~- 93 (256)
T 1nkv_A 36 PGTRILDLGSGSGEMLCTWARDH---------------------GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHN- 93 (256)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHT---------------------CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES-
T ss_pred CCCEEEEECCCCCHHHHHHHHhc---------------------CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEC-
Confidence 45799999999999988776322 12466667653221111 111110 11223333
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
++.+ +.+++++|+++|..++|++.+. ..+|+.-.+-|+|
T Consensus 94 --d~~~-~~~~~~fD~V~~~~~~~~~~~~--------------------------------------~~~l~~~~r~Lkp 132 (256)
T 1nkv_A 94 --DAAG-YVANEKCDVAACVGATWIAGGF--------------------------------------AGAEELLAQSLKP 132 (256)
T ss_dssp --CCTT-CCCSSCEEEEEEESCGGGTSSS--------------------------------------HHHHHHHTTSEEE
T ss_pred --ChHh-CCcCCCCCEEEECCChHhcCCH--------------------------------------HHHHHHHHHHcCC
Confidence 3333 3337899999999999996532 2478888899999
Q ss_pred CceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEE
Q 017702 218 GGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEK 297 (367)
Q Consensus 218 GG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~ 297 (367)
||++++..+. ...... . ..+...| . ......+++.+++.+++++.| |++..++.
T Consensus 133 gG~l~~~~~~-~~~~~~-~--------~~~~~~~--------~-------~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~ 186 (256)
T 1nkv_A 133 GGIMLIGEPY-WRQLPA-T--------EEIAQAC--------G-------VSSTSDFLTLPGLVGAFDDLG-YDVVEMVL 186 (256)
T ss_dssp EEEEEEEEEE-ETTCCS-S--------HHHHHTT--------T-------CSCGGGSCCHHHHHHHHHTTT-BCCCEEEE
T ss_pred CeEEEEecCc-ccCCCC-h--------HHHHHHH--------h-------cccccccCCHHHHHHHHHHCC-CeeEEEEe
Confidence 9999998765 322110 0 1111110 0 011125789999999999997 98876543
|
| >3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440} | Back alignment and structure |
|---|
Probab=98.97 E-value=3.1e-09 Score=94.97 Aligned_cols=160 Identities=16% Similarity=0.159 Sum_probs=93.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCccc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSF 141 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SF 141 (367)
...+|+|+|||+|..+..+.+. ..+++--|+...-.. ..+.. ....+..+.-..+
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~----------------------~~~v~~vD~s~~~~~-~a~~~--~~~~~~~~~~~~~ 106 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADR----------------------GIEAVGVDGDRTLVD-AARAA--GAGEVHLASYAQL 106 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTT----------------------TCEEEEEESCHHHHH-HHHHT--CSSCEEECCHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHHC----------------------CCEEEEEcCCHHHHH-HHHHh--cccccchhhHHhh
Confidence 3489999999999988766511 125677777532211 11211 1222333332222
Q ss_pred cccC-CCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCce
Q 017702 142 HSRL-FPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGL 220 (367)
Q Consensus 142 y~~l-~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~ 220 (367)
-... .+.+++|+++|+.++| .. |...+|+.-++-|+|||+
T Consensus 107 ~~~~~~~~~~fD~v~~~~~l~-~~--------------------------------------~~~~~l~~~~~~L~pgG~ 147 (227)
T 3e8s_A 107 AEAKVPVGKDYDLICANFALL-HQ--------------------------------------DIIELLSAMRTLLVPGGA 147 (227)
T ss_dssp HTTCSCCCCCEEEEEEESCCC-SS--------------------------------------CCHHHHHHHHHTEEEEEE
T ss_pred cccccccCCCccEEEECchhh-hh--------------------------------------hHHHHHHHHHHHhCCCeE
Confidence 2223 3455699999999999 22 223588899999999999
Q ss_pred EEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEEec
Q 017702 221 MVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLSQ 300 (367)
Q Consensus 221 lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~~~ 300 (367)
+++..+. ...... ..... .|....-.+.. -.....++++++.+++.+++++.| |++++++....
T Consensus 148 l~~~~~~-~~~~~~-~~~~~---------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~~~ 211 (227)
T 3e8s_A 148 LVIQTLH-PWSVAD-GDYQD---------GWREESFAGFA----GDWQPMPWYFRTLASWLNALDMAG-LRLVSLQEPQH 211 (227)
T ss_dssp EEEEECC-TTTTCT-TCCSC---------EEEEECCTTSS----SCCCCEEEEECCHHHHHHHHHHTT-EEEEEEECCCC
T ss_pred EEEEecC-ccccCc-ccccc---------ccchhhhhccc----cCcccceEEEecHHHHHHHHHHcC-CeEEEEecCCC
Confidence 9999986 322110 00000 00000000000 001145678899999999999997 99999877444
Q ss_pred C
Q 017702 301 P 301 (367)
Q Consensus 301 p 301 (367)
|
T Consensus 212 ~ 212 (227)
T 3e8s_A 212 P 212 (227)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans} | Back alignment and structure |
|---|
Probab=98.96 E-value=1.3e-08 Score=95.03 Aligned_cols=100 Identities=17% Similarity=0.285 Sum_probs=68.7
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc-cccceeeccCccc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH-ARKYFAAGLPGSF 141 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~-~~~~f~~gvp~SF 141 (367)
.-+|+|+|||+|..|..+.+. --+|+-.|+... ..+.... .+-.|..+ ++
T Consensus 40 ~~~vLDvGcGtG~~~~~l~~~----------------------~~~v~gvD~s~~----ml~~a~~~~~v~~~~~---~~ 90 (257)
T 4hg2_A 40 RGDALDCGCGSGQASLGLAEF----------------------FERVHAVDPGEA----QIRQALRHPRVTYAVA---PA 90 (257)
T ss_dssp SSEEEEESCTTTTTHHHHHTT----------------------CSEEEEEESCHH----HHHTCCCCTTEEEEEC---CT
T ss_pred CCCEEEEcCCCCHHHHHHHHh----------------------CCEEEEEeCcHH----hhhhhhhcCCceeehh---hh
Confidence 468999999999999877521 115677777532 2222222 12234443 34
Q ss_pred cccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceE
Q 017702 142 HSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLM 221 (367)
Q Consensus 142 y~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~l 221 (367)
..--+|++++|+|+|+.++||+. ...+|+.-++-|||||+|
T Consensus 91 e~~~~~~~sfD~v~~~~~~h~~~---------------------------------------~~~~~~e~~rvLkpgG~l 131 (257)
T 4hg2_A 91 EDTGLPPASVDVAIAAQAMHWFD---------------------------------------LDRFWAELRRVARPGAVF 131 (257)
T ss_dssp TCCCCCSSCEEEEEECSCCTTCC---------------------------------------HHHHHHHHHHHEEEEEEE
T ss_pred hhhcccCCcccEEEEeeehhHhh---------------------------------------HHHHHHHHHHHcCCCCEE
Confidence 44557999999999999999963 124778888899999999
Q ss_pred EEEeecccCC
Q 017702 222 VLILAAVVPD 231 (367)
Q Consensus 222 vl~~~g~~~n 231 (367)
++...+ ...
T Consensus 132 ~~~~~~-~~~ 140 (257)
T 4hg2_A 132 AAVTYG-LTR 140 (257)
T ss_dssp EEEEEC-CCB
T ss_pred EEEECC-CCC
Confidence 999887 443
|
| >3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei} | Back alignment and structure |
|---|
Probab=98.95 E-value=2.7e-07 Score=85.34 Aligned_cols=167 Identities=11% Similarity=0.077 Sum_probs=96.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCcc------chHHHhhcCCc----ccc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDN------DFNTLFKSLPH----ARK 131 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~N------DFn~lf~~l~~----~~~ 131 (367)
+..+|+|+|||+|..+..+.+.. .| ..+|+--|+... -....-+.+.. .+-
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~----------------g~---~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v 103 (275)
T 3bkx_A 43 PGEKILEIGCGQGDLSAVLADQV----------------GS---SGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRL 103 (275)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH----------------CT---TCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHh----------------CC---CCEEEEEECCccccccHHHHHHHHHHHHhcCCCCce
Confidence 34799999999999998776332 12 236778888654 22211111111 112
Q ss_pred ceeeccCcccc--ccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHH
Q 017702 132 YFAAGLPGSFH--SRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLN 209 (367)
Q Consensus 132 ~f~~gvp~SFy--~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~ 209 (367)
.|..+. .+. ..-+|++++|+|+|+.++|++.+. ..+++
T Consensus 104 ~~~~~d--~~~~~~~~~~~~~fD~v~~~~~l~~~~~~--------------------------------------~~~~~ 143 (275)
T 3bkx_A 104 TVHFNT--NLSDDLGPIADQHFDRVVLAHSLWYFASA--------------------------------------NALAL 143 (275)
T ss_dssp EEECSC--CTTTCCGGGTTCCCSEEEEESCGGGSSCH--------------------------------------HHHHH
T ss_pred EEEECC--hhhhccCCCCCCCEEEEEEccchhhCCCH--------------------------------------HHHHH
Confidence 233332 232 223467899999999999996531 13555
Q ss_pred HHHHhhccCceEEEEeecccCCCCCCCCCchhhHHHHHH-HHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCC
Q 017702 210 ARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILG-SCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNG 288 (367)
Q Consensus 210 ~Ra~EL~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~-~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g 288 (367)
....-++|||++++.... .+...+ .....++..+. ..+... .. ......+.+++.+++.+++++.|
T Consensus 144 ~~~~l~~~gG~l~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~-~~--------~~~~~~~~~~s~~~l~~~l~~aG 210 (275)
T 3bkx_A 144 LFKNMAAVCDHVDVAEWS-MQPTAL---DQIGHLQAAMIQGLLYAI-AP--------SDVANIRTLITPDTLAQIAHDNT 210 (275)
T ss_dssp HHHHHTTTCSEEEEEEEC-SSCSSG---GGHHHHHHHHHHHHHHHH-SC--------CTTCSCCCCCCHHHHHHHHHHHT
T ss_pred HHHHHhCCCCEEEEEEec-CCCCch---hhhhHHHHHHHHHHHhhc-cc--------cccccccccCCHHHHHHHHHHCC
Confidence 555556669999999887 433211 01111112111 111111 00 11223446799999999999997
Q ss_pred ceEEeEEEEEecC
Q 017702 289 NFTIEKMEKLSQP 301 (367)
Q Consensus 289 ~F~I~~lE~~~~p 301 (367)
|++.+.+.+..+
T Consensus 211 -f~~~~~~~~~~~ 222 (275)
T 3bkx_A 211 -WTYTAGTIVEDP 222 (275)
T ss_dssp -CEEEECCCBCCT
T ss_pred -CeeEEEEEecCC
Confidence 999988877554
|
| >3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=98.94 E-value=4.2e-09 Score=93.52 Aligned_cols=154 Identities=10% Similarity=0.081 Sum_probs=90.8
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC---Cc-cccceeeccCc
Q 017702 64 FKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL---PH-ARKYFAAGLPG 139 (367)
Q Consensus 64 ~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l---~~-~~~~f~~gvp~ 139 (367)
.+|+|+|||+|..+..+.+. + ..+++--|+...-....-+.+ .. .+-.|..+.
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~------------------~---~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d-- 101 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQ------------------S---DFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGD-- 101 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHH------------------S---EEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECB--
T ss_pred CEEEEECCCCCHHHHHHHHc------------------C---CCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcC--
Confidence 49999999999988877621 1 346777777532221111111 11 112233333
Q ss_pred cccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 140 SFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
+.+--+|++++|+++++.++||+. |...+|+.-.+-|+|||
T Consensus 102 -~~~~~~~~~~~D~v~~~~~l~~~~--------------------------------------~~~~~l~~~~~~L~pgG 142 (219)
T 3dlc_A 102 -VHNIPIEDNYADLIVSRGSVFFWE--------------------------------------DVATAFREIYRILKSGG 142 (219)
T ss_dssp -TTBCSSCTTCEEEEEEESCGGGCS--------------------------------------CHHHHHHHHHHHEEEEE
T ss_pred -HHHCCCCcccccEEEECchHhhcc--------------------------------------CHHHHHHHHHHhCCCCC
Confidence 344347889999999999999963 33468888999999999
Q ss_pred eEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEE
Q 017702 220 LMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEK 297 (367)
Q Consensus 220 ~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~ 297 (367)
++++...- ... ...+.+...+... . .... ..+.......+.+++++++++.| |++.++..
T Consensus 143 ~l~~~~~~-~~~----------~~~~~~~~~~~~~---~-~~~~--~~~~~~~~~~~~~~~~~~l~~aG-f~~v~~~~ 202 (219)
T 3dlc_A 143 KTYIGGGF-GNK----------ELRDSISAEMIRK---N-PDWK--EFNRKNISQENVERFQNVLDEIG-ISSYEIIL 202 (219)
T ss_dssp EEEEEECC-SSH----------HHHHHHHHHHHHH---C-TTHH--HHHHHHSSHHHHHHHHHHHHHHT-CSSEEEEE
T ss_pred EEEEEecc-CcH----------HHHHHHHHHHHHh---H-HHHH--hhhhhccccCCHHHHHHHHHHcC-CCeEEEEe
Confidence 99987643 111 1122222222221 0 0000 00111122448899999999997 97766553
|
| >2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15 | Back alignment and structure |
|---|
Probab=98.94 E-value=3.1e-09 Score=98.89 Aligned_cols=86 Identities=20% Similarity=0.179 Sum_probs=64.0
Q ss_pred CCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEEEEeec
Q 017702 148 RSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAA 227 (367)
Q Consensus 148 ~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g 227 (367)
.+++|+|+|+.+|||+..-+ .|+...|+.-++-|||||+|++....
T Consensus 154 ~~~fD~V~~~~~l~~i~~~~----------------------------------~~~~~~l~~i~r~LKPGG~li~~~~~ 199 (263)
T 2a14_A 154 LPLADCVLTLLAMECACCSL----------------------------------DAYRAALCNLASLLKPGGHLVTTVTL 199 (263)
T ss_dssp CCCEEEEEEESCHHHHCSSH----------------------------------HHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred cCCCCEeeehHHHHHhcCCH----------------------------------HHHHHHHHHHHHHcCCCcEEEEEEee
Confidence 56999999999999965321 26777899999999999999999765
Q ss_pred ccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEEe
Q 017702 228 VVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLS 299 (367)
Q Consensus 228 ~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~~ 299 (367)
..+.. . .|- -..+.+..+.+|+.++++++| |++..++...
T Consensus 200 -~~~~~-----------~-----------~g~--------~~~~~~~~~~~~l~~~l~~aG-F~i~~~~~~~ 239 (263)
T 2a14_A 200 -RLPSY-----------M-----------VGK--------REFSCVALEKGEVEQAVLDAG-FDIEQLLHSP 239 (263)
T ss_dssp -SCCEE-----------E-----------ETT--------EEEECCCCCHHHHHHHHHHTT-EEEEEEEEEC
T ss_pred -cCccc-----------e-----------eCC--------eEeeccccCHHHHHHHHHHCC-CEEEEEeecc
Confidence 32210 0 110 013445679999999999997 9999988764
|
| >3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=1.9e-08 Score=95.79 Aligned_cols=150 Identities=12% Similarity=0.058 Sum_probs=93.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHH---hhcCCc-cccceeecc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTL---FKSLPH-ARKYFAAGL 137 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~l---f~~l~~-~~~~f~~gv 137 (367)
...+|+|+|||+|..+..+.+.. ..+|+--|+...--... +....- .+--|..+.
T Consensus 117 ~~~~vLDiGcG~G~~~~~la~~~---------------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d 175 (312)
T 3vc1_A 117 PDDTLVDAGCGRGGSMVMAHRRF---------------------GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCN 175 (312)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH---------------------CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECC
T ss_pred CCCEEEEecCCCCHHHHHHHHHc---------------------CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECC
Confidence 45799999999999998876432 11456666643211111 111111 122344443
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
+.+--+|++++|+|+|+.++||+. + ..+|+.-.+-|+|
T Consensus 176 ---~~~~~~~~~~fD~V~~~~~l~~~~--~-------------------------------------~~~l~~~~~~Lkp 213 (312)
T 3vc1_A 176 ---MLDTPFDKGAVTASWNNESTMYVD--L-------------------------------------HDLFSEHSRFLKV 213 (312)
T ss_dssp ---TTSCCCCTTCEEEEEEESCGGGSC--H-------------------------------------HHHHHHHHHHEEE
T ss_pred ---hhcCCCCCCCEeEEEECCchhhCC--H-------------------------------------HHHHHHHHHHcCC
Confidence 333336789999999999999963 2 2488888999999
Q ss_pred CceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEE
Q 017702 218 GGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEK 297 (367)
Q Consensus 218 GG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~ 297 (367)
||++++.... ..+.... ....+.. +... ..| .+++.+++.+++++.| |++..++.
T Consensus 214 gG~l~~~~~~-~~~~~~~----~~~~~~~----~~~~--------------~~~-~~~s~~~~~~~l~~aG-f~~~~~~~ 268 (312)
T 3vc1_A 214 GGRYVTITGC-WNPRYGQ----PSKWVSQ----INAH--------------FEC-NIHSRREYLRAMADNR-LVPHTIVD 268 (312)
T ss_dssp EEEEEEEEEE-ECTTTCS----CCHHHHH----HHHH--------------HTC-CCCBHHHHHHHHHTTT-EEEEEEEE
T ss_pred CcEEEEEEcc-ccccccc----hhHHHHH----HHhh--------------hcC-CCCCHHHHHHHHHHCC-CEEEEEEe
Confidence 9999999887 4432100 0111111 1110 011 3789999999999997 99988877
Q ss_pred Ee
Q 017702 298 LS 299 (367)
Q Consensus 298 ~~ 299 (367)
+.
T Consensus 269 ~~ 270 (312)
T 3vc1_A 269 LT 270 (312)
T ss_dssp CH
T ss_pred CC
Confidence 63
|
| >4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=2.8e-08 Score=98.30 Aligned_cols=146 Identities=13% Similarity=0.186 Sum_probs=93.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhc-CCccccceeeccCcc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKS-LPHARKYFAAGLPGS 140 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~-l~~~~~~f~~gvp~S 140 (367)
...+|+|+|||+|..+..+.+. ..+++--|+..+-....-+. ++.....|..+.
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~~~----------------------g~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~--- 161 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQEA----------------------GVRHLGFEPSSGVAAKAREKGIRVRTDFFEKAT--- 161 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHHHT----------------------TCEEEEECCCHHHHHHHHTTTCCEECSCCSHHH---
T ss_pred CCCEEEEecCCCCHHHHHHHHc----------------------CCcEEEECCCHHHHHHHHHcCCCcceeeechhh---
Confidence 4579999999999988776521 12577778764332221111 111111121111
Q ss_pred ccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCce
Q 017702 141 FHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGL 220 (367)
Q Consensus 141 Fy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~ 220 (367)
.-.--++++++|+|+|+.++||+. |...||+.-++-|+|||+
T Consensus 162 ~~~l~~~~~~fD~I~~~~vl~h~~--------------------------------------d~~~~l~~~~r~LkpgG~ 203 (416)
T 4e2x_A 162 ADDVRRTEGPANVIYAANTLCHIP--------------------------------------YVQSVLEGVDALLAPDGV 203 (416)
T ss_dssp HHHHHHHHCCEEEEEEESCGGGCT--------------------------------------THHHHHHHHHHHEEEEEE
T ss_pred HhhcccCCCCEEEEEECChHHhcC--------------------------------------CHHHHHHHHHHHcCCCeE
Confidence 011124578999999999999974 344699999999999999
Q ss_pred EEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhc-cCCCcccCCHHHHHHHHHhCCceEEeEEEEEe
Q 017702 221 MVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDS-FNLPTYNATPKELEAIIRTNGNFTIEKMEKLS 299 (367)
Q Consensus 221 lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~-f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~~ 299 (367)
|++..+. .++ +.... .++. +.-.+.+++.++++.++++.| |++..++.+.
T Consensus 204 l~i~~~~-~~~----------------------~~~~~-----~~~~~~~~~~~~~s~~~l~~ll~~aG-f~~~~~~~~~ 254 (416)
T 4e2x_A 204 FVFEDPY-LGD----------------------IVAKT-----SFDQIFDEHFFLFSATSVQGMAQRCG-FELVDVQRLP 254 (416)
T ss_dssp EEEEEEC-HHH----------------------HHHHT-----CGGGCSTTCCEECCHHHHHHHHHHTT-EEEEEEEEEC
T ss_pred EEEEeCC-hHH----------------------hhhhc-----chhhhhhhhhhcCCHHHHHHHHHHcC-CEEEEEEEcc
Confidence 9998765 211 00011 1111 123456789999999999997 9999888864
|
| >3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=98.92 E-value=2e-08 Score=89.82 Aligned_cols=154 Identities=14% Similarity=0.112 Sum_probs=94.7
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCccc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSF 141 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SF 141 (367)
+..+|+|+|||+|..+..+.+ .+ .+++..|....-....-+... -+..+. +
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~------------------~~----~~~~~~D~~~~~~~~~~~~~~----~~~~~d---~ 82 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKE------------------NG----TRVSGIEAFPEAAEQAKEKLD----HVVLGD---I 82 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHT------------------TT----CEEEEEESSHHHHHHHHTTSS----EEEESC---T
T ss_pred CCCcEEEeCCCCCHHHHHHHh------------------cC----CeEEEEeCCHHHHHHHHHhCC----cEEEcc---h
Confidence 457999999999999887651 11 256676765422222111111 122222 2
Q ss_pred cc--cCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 142 HS--RLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 142 y~--~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
.. .-++++++|+++++.++|++.+ ...+|+.-.+-|+|||
T Consensus 83 ~~~~~~~~~~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~L~~gG 124 (230)
T 3cc8_A 83 ETMDMPYEEEQFDCVIFGDVLEHLFD--------------------------------------PWAVIEKVKPYIKQNG 124 (230)
T ss_dssp TTCCCCSCTTCEEEEEEESCGGGSSC--------------------------------------HHHHHHHTGGGEEEEE
T ss_pred hhcCCCCCCCccCEEEECChhhhcCC--------------------------------------HHHHHHHHHHHcCCCC
Confidence 22 3356789999999999999652 2258888889999999
Q ss_pred eEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhh-ccCCCcccCCHHHHHHHHHhCCceEEeEEEEE
Q 017702 220 LMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVD-SFNLPTYNATPKELEAIIRTNGNFTIEKMEKL 298 (367)
Q Consensus 220 ~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d-~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~ 298 (367)
++++..+. ... +..+ ..+.. +........ .-.....+.+.+++.+++++.| |++.+.+.+
T Consensus 125 ~l~~~~~~-~~~------------~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~ 185 (230)
T 3cc8_A 125 VILASIPN-VSH------------ISVL----APLLA-GNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAG-YSISKVDRV 185 (230)
T ss_dssp EEEEEEEC-TTS------------HHHH----HHHHT-TCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTT-EEEEEEEEE
T ss_pred EEEEEeCC-cch------------HHHH----HHHhc-CCceeccCCCCCcceEEEecHHHHHHHHHHcC-CeEEEEEec
Confidence 99999876 321 1111 11111 111110000 0012345689999999999997 999999887
Q ss_pred ecC
Q 017702 299 SQP 301 (367)
Q Consensus 299 ~~p 301 (367)
..+
T Consensus 186 ~~~ 188 (230)
T 3cc8_A 186 YVD 188 (230)
T ss_dssp ECC
T ss_pred ccC
Confidence 655
|
| >1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36 | Back alignment and structure |
|---|
Probab=98.90 E-value=2.6e-08 Score=89.14 Aligned_cols=142 Identities=10% Similarity=0.060 Sum_probs=87.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC--------------
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP-------------- 127 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~-------------- 127 (367)
...+|+|+|||+|.++..+.+. -.+|+--|+...--....+...
T Consensus 22 ~~~~vLD~GCG~G~~~~~la~~----------------------g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~ 79 (203)
T 1pjz_A 22 PGARVLVPLCGKSQDMSWLSGQ----------------------GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVY 79 (203)
T ss_dssp TTCEEEETTTCCSHHHHHHHHH----------------------CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEE
T ss_pred CCCEEEEeCCCCcHhHHHHHHC----------------------CCeEEEEeCCHHHHHHHHHHccCCcccccccccccc
Confidence 4579999999999999887641 0134555554322222111110
Q ss_pred -ccccceeeccCccccccCCCC-CceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHH
Q 017702 128 -HARKYFAAGLPGSFHSRLFPR-SSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDME 205 (367)
Q Consensus 128 -~~~~~f~~gvp~SFy~~l~P~-~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~ 205 (367)
..+--|..+. +..--+++ +++|+|++..++|++.. .|..
T Consensus 80 ~~~~v~~~~~d---~~~l~~~~~~~fD~v~~~~~l~~l~~------------------------------------~~~~ 120 (203)
T 1pjz_A 80 AAPGIEIWCGD---FFALTARDIGHCAAFYDRAAMIALPA------------------------------------DMRE 120 (203)
T ss_dssp ECSSSEEEEEC---CSSSTHHHHHSEEEEEEESCGGGSCH------------------------------------HHHH
T ss_pred cCCccEEEECc---cccCCcccCCCEEEEEECcchhhCCH------------------------------------HHHH
Confidence 0111233332 22222233 79999999999999641 1445
Q ss_pred HHHHHHHHhhccCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHH
Q 017702 206 SFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIR 285 (367)
Q Consensus 206 ~fL~~Ra~EL~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~ 285 (367)
.+|+.-++-|||||++++.+.. .+.. ...-|.+..+.+|++++++
T Consensus 121 ~~l~~~~r~LkpgG~~~l~~~~-~~~~----------------------------------~~~~~~~~~~~~el~~~~~ 165 (203)
T 1pjz_A 121 RYVQHLEALMPQACSGLLITLE-YDQA----------------------------------LLEGPPFSVPQTWLHRVMS 165 (203)
T ss_dssp HHHHHHHHHSCSEEEEEEEEES-SCSS----------------------------------SSSSCCCCCCHHHHHHTSC
T ss_pred HHHHHHHHHcCCCcEEEEEEEe-cCcc----------------------------------ccCCCCCCCCHHHHHHHhc
Confidence 6888899999999996666654 2210 0112334578999999998
Q ss_pred hCCceEEeEEEEEecC
Q 017702 286 TNGNFTIEKMEKLSQP 301 (367)
Q Consensus 286 ~~g~F~I~~lE~~~~p 301 (367)
+ | |+++.++....+
T Consensus 166 ~-g-f~i~~~~~~~~~ 179 (203)
T 1pjz_A 166 G-N-WEVTKVGGQDTL 179 (203)
T ss_dssp S-S-EEEEEEEESSCT
T ss_pred C-C-cEEEEeccccch
Confidence 7 5 999988877654
|
| >2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ... | Back alignment and structure |
|---|
Probab=98.90 E-value=3.6e-09 Score=99.49 Aligned_cols=90 Identities=17% Similarity=0.222 Sum_probs=67.1
Q ss_pred CCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEEEEe
Q 017702 146 FPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLIL 225 (367)
Q Consensus 146 ~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~ 225 (367)
+|++++|+|+|+.++||+..-. .|+..+|+.-++-|||||+|++..
T Consensus 170 ~~~~~fD~V~~~~~l~~~~~~~----------------------------------~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 170 PAPLPADALVSAFCLEAVSPDL----------------------------------ASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp SSCSSEEEEEEESCHHHHCSSH----------------------------------HHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred cCCCCCCEEEehhhhhhhcCCH----------------------------------HHHHHHHHHHHHhcCCCCEEEEEE
Confidence 5678899999999999965321 266779999999999999999975
Q ss_pred ecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEEecC
Q 017702 226 AAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLSQP 301 (367)
Q Consensus 226 ~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~~~p 301 (367)
.. ..+.. . .| .-..+.++.+.+++.+++++.| |++..++.+..|
T Consensus 216 ~~-~~~~~-----------~-----------~~--------~~~~~~~~~~~~~l~~~l~~aG-f~~~~~~~~~~~ 259 (289)
T 2g72_A 216 AL-EESWY-----------L-----------AG--------EARLTVVPVSEEEVREALVRSG-YKVRDLRTYIMP 259 (289)
T ss_dssp EE-SCCEE-----------E-----------ET--------TEEEECCCCCHHHHHHHHHHTT-EEEEEEEEEECC
T ss_pred ec-CcceE-----------E-----------cC--------CeeeeeccCCHHHHHHHHHHcC-CeEEEeeEeecc
Confidence 43 22110 0 01 0123456789999999999997 999999888755
|
| >2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=3.9e-08 Score=93.50 Aligned_cols=160 Identities=13% Similarity=0.134 Sum_probs=93.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC---Cc-cccceeecc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL---PH-ARKYFAAGL 137 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l---~~-~~~~f~~gv 137 (367)
...+|+|+|||+|..+..+.+.. ..+|+--|+...-....-+.+ .. .+--|..+.
T Consensus 90 ~~~~vLDiGcG~G~~~~~la~~~---------------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d 148 (318)
T 2fk8_A 90 PGMTLLDIGCGWGTTMRRAVERF---------------------DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQG 148 (318)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH---------------------CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESC
T ss_pred CcCEEEEEcccchHHHHHHHHHC---------------------CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECC
Confidence 45799999999999988776332 114666666432221111111 10 112233333
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
+ ..+ | +++|+++|..++|++.. .|+..+|+.-.+-|+|
T Consensus 149 ---~-~~~-~-~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~Lkp 186 (318)
T 2fk8_A 149 ---W-EDF-A-EPVDRIVSIEAFEHFGH------------------------------------ENYDDFFKRCFNIMPA 186 (318)
T ss_dssp ---G-GGC-C-CCCSEEEEESCGGGTCG------------------------------------GGHHHHHHHHHHHSCT
T ss_pred ---h-HHC-C-CCcCEEEEeChHHhcCH------------------------------------HHHHHHHHHHHHhcCC
Confidence 2 222 3 79999999999999642 1566789999999999
Q ss_pred CceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCC-cccCCHHHHHHHHHhCCceEEeEEE
Q 017702 218 GGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLP-TYNATPKELEAIIRTNGNFTIEKME 296 (367)
Q Consensus 218 GG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P-~y~~s~eE~~~~l~~~g~F~I~~lE 296 (367)
||++++..+. .++............++ ...+.+... ....| .+.++.+++.+++++.| |++...+
T Consensus 187 gG~l~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~----------~~~~~~~~~~s~~~~~~~l~~aG-f~~~~~~ 252 (318)
T 2fk8_A 187 DGRMTVQSSV-SYHPYEMAARGKKLSFE--TARFIKFIV----------TEIFPGGRLPSTEMMVEHGEKAG-FTVPEPL 252 (318)
T ss_dssp TCEEEEEEEE-CCCHHHHHTTCHHHHHH--HHHHHHHHH----------HHTSTTCCCCCHHHHHHHHHHTT-CBCCCCE
T ss_pred CcEEEEEEec-cCCchhhhhcccccccc--ccchhhHHH----------HhcCCCCcCCCHHHHHHHHHhCC-CEEEEEE
Confidence 9999999987 44311000000000000 000111111 11122 45789999999999997 9998776
Q ss_pred EE
Q 017702 297 KL 298 (367)
Q Consensus 297 ~~ 298 (367)
.+
T Consensus 253 ~~ 254 (318)
T 2fk8_A 253 SL 254 (318)
T ss_dssp EC
T ss_pred ec
Confidence 54
|
| >4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A | Back alignment and structure |
|---|
Probab=98.87 E-value=2.3e-08 Score=98.35 Aligned_cols=109 Identities=19% Similarity=0.232 Sum_probs=71.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhc-----------CCccc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKS-----------LPHAR 130 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~-----------l~~~~ 130 (367)
+..+|+|+|||+|..+..+.+.. .| ..+|+-.|+...-....-+. +...+
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~----------------~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~ 143 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLV----------------GE---HGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSN 143 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH----------------TT---TCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCC
T ss_pred CCCEEEEecCccCHHHHHHHHHh----------------CC---CCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCc
Confidence 45799999999999998876433 12 34678888754222111111 11112
Q ss_pred cceeeccCcccccc---CCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHH
Q 017702 131 KYFAAGLPGSFHSR---LFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESF 207 (367)
Q Consensus 131 ~~f~~gvp~SFy~~---l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~f 207 (367)
-.|..+.-...-.. -+|++++|+|+|+.++||+. |+..+
T Consensus 144 v~~~~~d~~~l~~~~~~~~~~~~fD~V~~~~~l~~~~--------------------------------------d~~~~ 185 (383)
T 4fsd_A 144 VRFLKGFIENLATAEPEGVPDSSVDIVISNCVCNLST--------------------------------------NKLAL 185 (383)
T ss_dssp EEEEESCTTCGGGCBSCCCCTTCEEEEEEESCGGGCS--------------------------------------CHHHH
T ss_pred eEEEEccHHHhhhcccCCCCCCCEEEEEEccchhcCC--------------------------------------CHHHH
Confidence 23444432221111 57889999999999999964 33468
Q ss_pred HHHHHHhhccCceEEEEeec
Q 017702 208 LNARAEELVPGGLMVLILAA 227 (367)
Q Consensus 208 L~~Ra~EL~pGG~lvl~~~g 227 (367)
|+.-.+-|+|||+|++..+.
T Consensus 186 l~~~~r~LkpgG~l~i~~~~ 205 (383)
T 4fsd_A 186 FKEIHRVLRDGGELYFSDVY 205 (383)
T ss_dssp HHHHHHHEEEEEEEEEEEEE
T ss_pred HHHHHHHcCCCCEEEEEEec
Confidence 88999999999999998876
|
| >3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=98.87 E-value=4.5e-08 Score=94.80 Aligned_cols=151 Identities=21% Similarity=0.206 Sum_probs=94.9
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC-Ccc-ccceeeccC
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL-PHA-RKYFAAGLP 138 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l-~~~-~~~f~~gvp 138 (367)
++..+|+|+|||+|..+..+.+.. | ..+++.-|+|.. +-+.. ... ..--+.-+.
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~~-----------------p---~~~~~~~D~~~~----~~~~~~~~~~~~~~v~~~~ 238 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLREH-----------------P---GLQGVLLDRAEV----VARHRLDAPDVAGRWKVVE 238 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHHC-----------------T---TEEEEEEECHHH----HTTCCCCCGGGTTSEEEEE
T ss_pred cCCceEEEECCccCHHHHHHHHHC-----------------C---CCEEEEecCHHH----hhcccccccCCCCCeEEEe
Confidence 456899999999999988776322 3 457888888631 11111 110 000122344
Q ss_pred ccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccC
Q 017702 139 GSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPG 218 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 218 (367)
++|+ .-+| ++|+++++.++|++++ .+...+|+..++-|+||
T Consensus 239 ~d~~-~~~p--~~D~v~~~~vlh~~~d------------------------------------~~~~~~L~~~~~~Lkpg 279 (348)
T 3lst_A 239 GDFL-REVP--HADVHVLKRILHNWGD------------------------------------EDSVRILTNCRRVMPAH 279 (348)
T ss_dssp CCTT-TCCC--CCSEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHTCCTT
T ss_pred cCCC-CCCC--CCcEEEEehhccCCCH------------------------------------HHHHHHHHHHHHhcCCC
Confidence 5566 4456 9999999999996432 13457899999999999
Q ss_pred ceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEE
Q 017702 219 GLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEK 297 (367)
Q Consensus 219 G~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~ 297 (367)
|++++.-.. .++... ......++ +.-|+.. .-..++.+|+++++++.| |++.++..
T Consensus 280 G~l~i~e~~-~~~~~~---~~~~~~~d-----~~~~~~~-------------~~~~~t~~e~~~ll~~aG-f~~~~~~~ 335 (348)
T 3lst_A 280 GRVLVIDAV-VPEGND---AHQSKEMD-----FMMLAAR-------------TGQERTAAELEPLFTAAG-LRLDRVVG 335 (348)
T ss_dssp CEEEEEECC-BCSSSS---CCHHHHHH-----HHHHHTT-------------SCCCCBHHHHHHHHHHTT-EEEEEEEE
T ss_pred CEEEEEEec-cCCCCC---cchhhhcC-----hhhhhcC-------------CCcCCCHHHHHHHHHHCC-CceEEEEE
Confidence 999987664 333211 11111111 1112111 123678999999999997 99988765
|
| >2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A* | Back alignment and structure |
|---|
Probab=98.86 E-value=4.7e-08 Score=91.00 Aligned_cols=141 Identities=10% Similarity=0.059 Sum_probs=89.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC--------------
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP-------------- 127 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~-------------- 127 (367)
...+|+|+|||+|.++..+.+. -.+|+--|+...--....+...
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~----------------------G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~ 125 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADR----------------------GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGA 125 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHT----------------------TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTC
T ss_pred CCCeEEEeCCCCcHHHHHHHHC----------------------CCeEEEEECCHHHHHHHHHhcccccccccccccccc
Confidence 4579999999999999887631 1245555655432222222111
Q ss_pred ------ccccceeeccCccccccCCCC-CceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHH
Q 017702 128 ------HARKYFAAGLPGSFHSRLFPR-SSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQY 200 (367)
Q Consensus 128 ------~~~~~f~~gvp~SFy~~l~P~-~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~ 200 (367)
..+--|..| ++.+--++. +++|+|++..++|++. .
T Consensus 126 ~~~~~~~~~i~~~~~---D~~~l~~~~~~~FD~V~~~~~l~~l~---~-------------------------------- 167 (252)
T 2gb4_A 126 KVFKSSSGSISLYCC---SIFDLPRANIGKFDRIWDRGALVAIN---P-------------------------------- 167 (252)
T ss_dssp EEEEETTSSEEEEES---CTTTGGGGCCCCEEEEEESSSTTTSC---G--------------------------------
T ss_pred cccccCCCceEEEEC---ccccCCcccCCCEEEEEEhhhhhhCC---H--------------------------------
Confidence 011123333 233322332 7999999999999974 1
Q ss_pred HhhHHHHHHHHHHhhccCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHH
Q 017702 201 KNDMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKEL 280 (367)
Q Consensus 201 ~~D~~~fL~~Ra~EL~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~ 280 (367)
.+...+++.-++-|+|||+|++..+. .+... ..-|.+..+++|+
T Consensus 168 -~~~~~~l~~~~~~LkpGG~l~l~~~~-~~~~~----------------------------------~~g~~~~~~~~el 211 (252)
T 2gb4_A 168 -GDHDRYADIILSLLRKEFQYLVAVLS-YDPTK----------------------------------HAGPPFYVPSAEL 211 (252)
T ss_dssp -GGHHHHHHHHHHTEEEEEEEEEEEEE-CCTTS----------------------------------CCCSSCCCCHHHH
T ss_pred -HHHHHHHHHHHHHcCCCeEEEEEEEe-cCCcc----------------------------------CCCCCCCCCHHHH
Confidence 14456888899999999999876655 22110 0124455789999
Q ss_pred HHHHHhCCceEEeEEEEEec
Q 017702 281 EAIIRTNGNFTIEKMEKLSQ 300 (367)
Q Consensus 281 ~~~l~~~g~F~I~~lE~~~~ 300 (367)
.+++++ + |+|+.++.++.
T Consensus 212 ~~~l~~-~-f~v~~~~~~~~ 229 (252)
T 2gb4_A 212 KRLFGT-K-CSMQCLEEVDA 229 (252)
T ss_dssp HHHHTT-T-EEEEEEEEEEC
T ss_pred HHHhhC-C-eEEEEEecccc
Confidence 999976 4 99999987654
|
| >3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=98.86 E-value=3.6e-08 Score=89.30 Aligned_cols=167 Identities=19% Similarity=0.241 Sum_probs=93.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCccc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSF 141 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SF 141 (367)
...+|+|+|||+|..+..+.+. .. . +++..|+...-....-+.....+--|..+ ++
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~-----------------~~---~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~---d~ 98 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEH-----------------GA---S-YVLGLDLSEKMLARARAAGPDTGITYERA---DL 98 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-----------------TC---S-EEEEEESCHHHHHHHHHTSCSSSEEEEEC---CG
T ss_pred CCCEEEEEcCcCCHHHHHHHHC-----------------CC---C-eEEEEcCCHHHHHHHHHhcccCCceEEEc---Ch
Confidence 4579999999999988766421 01 1 56777775322222222222212223333 34
Q ss_pred cccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceE
Q 017702 142 HSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLM 221 (367)
Q Consensus 142 y~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~l 221 (367)
..-.+|++++|+++++.++||+. |...+|+.-++-|+|||++
T Consensus 99 ~~~~~~~~~fD~v~~~~~l~~~~--------------------------------------~~~~~l~~~~~~L~pgG~l 140 (243)
T 3bkw_A 99 DKLHLPQDSFDLAYSSLALHYVE--------------------------------------DVARLFRTVHQALSPGGHF 140 (243)
T ss_dssp GGCCCCTTCEEEEEEESCGGGCS--------------------------------------CHHHHHHHHHHHEEEEEEE
T ss_pred hhccCCCCCceEEEEeccccccc--------------------------------------hHHHHHHHHHHhcCcCcEE
Confidence 44446789999999999999964 2335888889999999999
Q ss_pred EEEeecccCCCCCCCCCch----hh-HHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEE
Q 017702 222 VLILAAVVPDGIPLSNSYV----GV-FNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKME 296 (367)
Q Consensus 222 vl~~~g~~~n~~~~~~~~~----~~-~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE 296 (367)
++.... ..........+. +. .+. +.....++... ..+..-....|.++.+|+.+++++.| |++..++
T Consensus 141 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~~~t~~~~~~~l~~aG-F~~~~~~ 212 (243)
T 3bkw_A 141 VFSTEH-PIYMAPARPGWAIDAEGRRTWP-----IDRYLVEGPRK-TDWLAKGVVKHHRTVGTTLNALIRSG-FAIEHVE 212 (243)
T ss_dssp EEEEEC-HHHHCCSSCSCEECTTSCEEEE-----ECCTTCCEEEC-TTHHHHSCCEEECCHHHHHHHHHHTT-CEEEEEE
T ss_pred EEEeCC-cccccCcCcceeecCCCceEEe-----eccccccccee-eeeccCceEEEeccHHHHHHHHHHcC-CEeeeec
Confidence 998864 110000000000 00 000 00000000000 00000134566789999999999997 9998887
Q ss_pred EE
Q 017702 297 KL 298 (367)
Q Consensus 297 ~~ 298 (367)
..
T Consensus 213 ~~ 214 (243)
T 3bkw_A 213 EF 214 (243)
T ss_dssp EC
T ss_pred cC
Confidence 64
|
| >2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42 | Back alignment and structure |
|---|
Probab=98.86 E-value=8.2e-09 Score=94.21 Aligned_cols=144 Identities=14% Similarity=0.158 Sum_probs=93.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCcc---ccceeeccC
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHA---RKYFAAGLP 138 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~---~~~f~~gvp 138 (367)
+..+|+|+|||+|..+..+.+.. ..+++..|+...-....-+.+... +--|..+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~---------------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~-- 135 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL---------------------FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCC-- 135 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT---------------------CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEEC--
T ss_pred CCCEEEEECCCCCHHHHHHHHhc---------------------CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEc--
Confidence 46799999999999988765211 115667776543222222222211 1123333
Q ss_pred ccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccC
Q 017702 139 GSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPG 218 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 218 (367)
++..-.++++++|++++..++|++.+ .++..+|+.-.+-|+||
T Consensus 136 -d~~~~~~~~~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~Lkpg 178 (241)
T 2ex4_A 136 -GLQDFTPEPDSYDVIWIQWVIGHLTD------------------------------------QHLAEFLRRCKGSLRPN 178 (241)
T ss_dssp -CGGGCCCCSSCEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHEEEE
T ss_pred -ChhhcCCCCCCEEEEEEcchhhhCCH------------------------------------HHHHHHHHHHHHhcCCC
Confidence 23344456779999999999999642 13456889999999999
Q ss_pred ceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEE
Q 017702 219 GLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKL 298 (367)
Q Consensus 219 G~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~ 298 (367)
|+|++..+. ..+.. +++ . ..+.+.++.+++++++++.| |++.+.+..
T Consensus 179 G~l~i~~~~-~~~~~---------~~~---------------------~-~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~ 225 (241)
T 2ex4_A 179 GIIVIKDNM-AQEGV---------ILD---------------------D-VDSSVCRDLDVVRRIICSAG-LSLLAEERQ 225 (241)
T ss_dssp EEEEEEEEE-BSSSE---------EEE---------------------T-TTTEEEEBHHHHHHHHHHTT-CCEEEEEEC
T ss_pred eEEEEEEcc-CCCcc---------eec---------------------c-cCCcccCCHHHHHHHHHHcC-CeEEEeeec
Confidence 999998776 33210 000 0 11234569999999999997 999888765
|
| >3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A* | Back alignment and structure |
|---|
Probab=98.84 E-value=8.4e-09 Score=98.12 Aligned_cols=164 Identities=13% Similarity=0.199 Sum_probs=93.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc----------ccc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH----------ARK 131 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~----------~~~ 131 (367)
+..+|+|+|||+|..+..+.+. + ..+++-.|+...-....-+.... .+-
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~------------------~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~ 92 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKG------------------R---INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSA 92 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHT------------------T---CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEE
T ss_pred CCCEEEEECCCCcHHHHHHHhc------------------C---CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceE
Confidence 4579999999999998877520 1 12566666653221111111100 011
Q ss_pred ceeeccCcccc-ccCC--CCCceeEEEeccccccc-cCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHH
Q 017702 132 YFAAGLPGSFH-SRLF--PRSSIHFVHTSYALHWL-SKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESF 207 (367)
Q Consensus 132 ~f~~gvp~SFy-~~l~--P~~svd~~~S~~alhWL-s~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~f 207 (367)
.|..+.....- ..-+ +++++|+|+|+.++||+ ... .|...+
T Consensus 93 ~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~-----------------------------------~~~~~~ 137 (313)
T 3bgv_A 93 EFITADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESY-----------------------------------EQADMM 137 (313)
T ss_dssp EEEECCTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSH-----------------------------------HHHHHH
T ss_pred EEEEecccccchhhhcccCCCCEEEEEEecchhhccCCH-----------------------------------HHHHHH
Confidence 23333321110 0114 34699999999999997 322 255679
Q ss_pred HHHHHHhhccCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHH--cC-------CCCHhhh------------h
Q 017702 208 LNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAK--MG-------VLSEEKV------------D 266 (367)
Q Consensus 208 L~~Ra~EL~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~--eG-------~i~~~~~------------d 266 (367)
|+.-++-|+|||+|++++++ .+ .+.+.|..... -| ..+.+.+ .
T Consensus 138 l~~~~~~LkpgG~li~~~~~-~~---------------~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~f~l~~ 201 (313)
T 3bgv_A 138 LRNACERLSPGGYFIGTTPN-SF---------------ELIRRLEASETESFGNEIYTVKFQKKGDYPLFGCKYDFNLEG 201 (313)
T ss_dssp HHHHHTTEEEEEEEEEEEEC-HH---------------HHHHHHTTSSSSEEECSSEEEEESCSSCCCSSCCEEEEEEC-
T ss_pred HHHHHHHhCCCcEEEEecCC-hH---------------HHHHHHHhhccCccCCeeEEEEeCCCCCCCCccceEEEEECC
Confidence 99999999999999999987 21 11112221000 00 0010011 1
Q ss_pred ccCCCcccCCHHHHHHHHHhCCceEEeEEEEE
Q 017702 267 SFNLPTYNATPKELEAIIRTNGNFTIEKMEKL 298 (367)
Q Consensus 267 ~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~ 298 (367)
....|.|..+.+++.+++++.| |++...+.+
T Consensus 202 ~~~~~~~~~~~~~~~~l~~~~G-~~~v~~~~f 232 (313)
T 3bgv_A 202 VVDVPEFLVYFPLLNEMAKKYN-MKLVYKKTF 232 (313)
T ss_dssp --CCEEECCCHHHHHHHGGGGT-EEEEEEEEH
T ss_pred cccCcceEEcHHHHHHHHHHcC-cEEEEecCH
Confidence 2245667788899999999987 999887654
|
| >1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41 | Back alignment and structure |
|---|
Probab=98.84 E-value=9.9e-08 Score=85.78 Aligned_cols=92 Identities=18% Similarity=0.228 Sum_probs=64.2
Q ss_pred CCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEEEEe
Q 017702 146 FPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLIL 225 (367)
Q Consensus 146 ~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~ 225 (367)
++++++|+++++.++||+. |...+|+.-.+-|+|||++++..
T Consensus 98 ~~~~~fD~v~~~~~l~~~~--------------------------------------~~~~~l~~~~~~L~pgG~l~i~~ 139 (219)
T 1vlm_A 98 LKDESFDFALMVTTICFVD--------------------------------------DPERALKEAYRILKKGGYLIVGI 139 (219)
T ss_dssp SCTTCEEEEEEESCGGGSS--------------------------------------CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCeeEEEEcchHhhcc--------------------------------------CHHHHHHHHHHHcCCCcEEEEEE
Confidence 5678999999999999964 22358888889999999999998
Q ss_pred ecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEEe
Q 017702 226 AAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLS 299 (367)
Q Consensus 226 ~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~~ 299 (367)
+. ..+ .+. ..+..+ ..+ ..+.....+.+.+++.+++++.| |++..+....
T Consensus 140 ~~-~~~-----------~~~---~~~~~~-~~~-------~~~~~~~~~~~~~~l~~~l~~~G-f~~~~~~~~~ 189 (219)
T 1vlm_A 140 VD-RES-----------FLG---REYEKN-KEK-------SVFYKNARFFSTEELMDLMRKAG-FEEFKVVQTL 189 (219)
T ss_dssp EC-SSS-----------HHH---HHHHHT-TTC--------CCSTTCCCCCHHHHHHHHHHTT-CEEEEEEEEC
T ss_pred eC-Ccc-----------HHH---HHHHHH-hcC-------cchhcccccCCHHHHHHHHHHCC-CeEEEEeccc
Confidence 76 322 011 111111 111 12333456789999999999997 9998877653
|
| >1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A* | Back alignment and structure |
|---|
Probab=98.84 E-value=4.5e-08 Score=91.36 Aligned_cols=108 Identities=16% Similarity=0.252 Sum_probs=68.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc----cccceeecc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH----ARKYFAAGL 137 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~----~~~~f~~gv 137 (367)
...+|+|+|||+|..+..+... + ..+++..|+...-....-+.+.. .+-.|..+.
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~------------------~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d 122 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERA------------------G---IGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQD 122 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHH------------------T---CSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESC
T ss_pred CCCeEEEECCCCCHHHHHHHHC------------------C---CCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECC
Confidence 4579999999999998875421 0 11566667654322221111111 111233332
Q ss_pred CccccccCC-CCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhc
Q 017702 138 PGSFHSRLF-PRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELV 216 (367)
Q Consensus 138 p~SFy~~l~-P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~ 216 (367)
+.+-.+ +++++|+|+++.++||+-..+ .|...+|+.-++-|+
T Consensus 123 ---~~~~~~~~~~~fD~v~~~~~l~~~~~~~----------------------------------~~~~~~l~~~~~~Lk 165 (298)
T 1ri5_A 123 ---SYGRHMDLGKEFDVISSQFSFHYAFSTS----------------------------------ESLDIAQRNIARHLR 165 (298)
T ss_dssp ---TTTSCCCCSSCEEEEEEESCGGGGGSSH----------------------------------HHHHHHHHHHHHTEE
T ss_pred ---ccccccCCCCCcCEEEECchhhhhcCCH----------------------------------HHHHHHHHHHHHhcC
Confidence 333234 678999999999999952111 266679999999999
Q ss_pred cCceEEEEeec
Q 017702 217 PGGLMVLILAA 227 (367)
Q Consensus 217 pGG~lvl~~~g 227 (367)
|||++++..+.
T Consensus 166 pgG~l~~~~~~ 176 (298)
T 1ri5_A 166 PGGYFIMTVPS 176 (298)
T ss_dssp EEEEEEEEEEC
T ss_pred CCCEEEEEECC
Confidence 99999999876
|
| >3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=98.83 E-value=6.3e-08 Score=93.44 Aligned_cols=150 Identities=13% Similarity=0.156 Sum_probs=93.4
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhh----cCCc-cccceeecc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFK----SLPH-ARKYFAAGL 137 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~----~l~~-~~~~f~~gv 137 (367)
..+|+|+|||+|..+..+.+.. | ..+++.-|+|. .-...+ .... .+-.| +
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~-----------------p---~~~~~~~D~~~--~~~~a~~~~~~~~~~~~v~~---~ 234 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRH-----------------P---QLTGQIWDLPT--TRDAARKTIHAHDLGGRVEF---F 234 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHC-----------------T---TCEEEEEECGG--GHHHHHHHHHHTTCGGGEEE---E
T ss_pred CCEEEEeCCCcCHHHHHHHHhC-----------------C---CCeEEEEECHH--HHHHHHHHHHhcCCCCceEE---E
Confidence 6899999999999888776322 3 35677779863 111111 1111 11223 3
Q ss_pred CccccccC-CCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhc
Q 017702 138 PGSFHSRL-FPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELV 216 (367)
Q Consensus 138 p~SFy~~l-~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~ 216 (367)
.++|.+.. ++++++|++++..++|++++ .+...+|+..++-|+
T Consensus 235 ~~d~~~~~~~~~~~~D~v~~~~vlh~~~~------------------------------------~~~~~~l~~~~~~L~ 278 (352)
T 3mcz_A 235 EKNLLDARNFEGGAADVVMLNDCLHYFDA------------------------------------REAREVIGHAAGLVK 278 (352)
T ss_dssp ECCTTCGGGGTTCCEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHTEE
T ss_pred eCCcccCcccCCCCccEEEEecccccCCH------------------------------------HHHHHHHHHHHHHcC
Confidence 44555443 25677999999999998542 245679999999999
Q ss_pred cCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeE
Q 017702 217 PGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEK 294 (367)
Q Consensus 217 pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~ 294 (367)
|||++++.-.. .++... ...+..+.+.. -|...+ ....++.+|+++++++.| |++.+
T Consensus 279 pgG~l~i~e~~-~~~~~~------~~~~~~~~~~~-~~~~~~------------~~~~~t~~e~~~ll~~aG-f~~~~ 335 (352)
T 3mcz_A 279 PGGALLILTMT-MNDDRV------TPALSADFSLH-MMVNTN------------HGELHPTPWIAGVVRDAG-LAVGE 335 (352)
T ss_dssp EEEEEEEEEEC-CCTTSS------SSHHHHHHHHH-HHHHST------------TCCCCCHHHHHHHHHHTT-CEEEE
T ss_pred CCCEEEEEEec-cCCCCC------CCchHHHhhHH-HHhhCC------------CCCcCCHHHHHHHHHHCC-Cceee
Confidence 99999988765 333211 11122222221 121110 112578999999999997 99877
|
| >3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=98.83 E-value=1.2e-08 Score=96.83 Aligned_cols=164 Identities=13% Similarity=0.058 Sum_probs=95.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc---c-ccceeecc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH---A-RKYFAAGL 137 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~---~-~~~f~~gv 137 (367)
...+|+|+|||+|..++.+.... .| ..+|+--|+...-....-+.+.. . +-.|..+.
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~~----------------~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d 178 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYSA----------------CP---GVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQD 178 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCTT----------------CT---TCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECC
T ss_pred CCCEEEEecCCCCHHHHHHHHhc----------------CC---CCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECc
Confidence 45799999999999888663110 23 34677777754322222222211 1 12244433
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
+.+-.++ +++|+++|+.++||+... .....+|+.-.+-|+|
T Consensus 179 ---~~~~~~~-~~fD~v~~~~~~~~~~~~-----------------------------------~~~~~~l~~~~~~Lkp 219 (305)
T 3ocj_A 179 ---AWKLDTR-EGYDLLTSNGLNIYEPDD-----------------------------------ARVTELYRRFWQALKP 219 (305)
T ss_dssp ---GGGCCCC-SCEEEEECCSSGGGCCCH-----------------------------------HHHHHHHHHHHHHEEE
T ss_pred ---hhcCCcc-CCeEEEEECChhhhcCCH-----------------------------------HHHHHHHHHHHHhcCC
Confidence 4443445 999999999999985421 1233588888999999
Q ss_pred CceEEEEeecccCCCCCCCCCch-----hhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEE
Q 017702 218 GGLMVLILAAVVPDGIPLSNSYV-----GVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTI 292 (367)
Q Consensus 218 GG~lvl~~~g~~~n~~~~~~~~~-----~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I 292 (367)
||++++.... ++........+. ..........+.+....+ -..+++.+++.+++++.| |++
T Consensus 220 gG~l~i~~~~-~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~l~~aG-F~~ 285 (305)
T 3ocj_A 220 GGALVTSFLT-PPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPR------------WNALRTHAQTRAQLEEAG-FTD 285 (305)
T ss_dssp EEEEEEECCC-CCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCS------------CCCCCCHHHHHHHHHHTT-CEE
T ss_pred CeEEEEEecC-CCCcccccccceeeccccchhhhhhhHHHHHHhhh------------hhccCCHHHHHHHHHHCC-CEE
Confidence 9999999987 443221111100 000111111122111111 113579999999999997 999
Q ss_pred eEEEE
Q 017702 293 EKMEK 297 (367)
Q Consensus 293 ~~lE~ 297 (367)
.+++.
T Consensus 286 v~~~~ 290 (305)
T 3ocj_A 286 LRFED 290 (305)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 88775
|
| >3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A* | Back alignment and structure |
|---|
Probab=98.81 E-value=9.9e-08 Score=91.50 Aligned_cols=150 Identities=18% Similarity=0.159 Sum_probs=91.7
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCc--cchHHHhhcCCc-cccceeecc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSD--NDFNTLFKSLPH-ARKYFAAGL 137 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~--NDFn~lf~~l~~-~~~~f~~gv 137 (367)
.+..+|+|+|||+|..+..+++.. | ..+++.-|+|. ......+..... .+--| +
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~~~~-----------------p---~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~---~ 224 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALLTAH-----------------E---DLSGTVLDLQGPASAAHRRFLDTGLSGRAQV---V 224 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHHHHC-----------------T---TCEEEEEECHHHHHHHHHHHHHTTCTTTEEE---E
T ss_pred CCCCEEEEeCCChhHHHHHHHHHC-----------------C---CCeEEEecCHHHHHHHHHhhhhcCcCcCeEE---e
Confidence 346899999999998887665322 2 34566668852 111111111110 11223 3
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
.++|+ .-+|. ++|++++..++|++++ .+...+|+.-++-|+|
T Consensus 225 ~~d~~-~~~p~-~~D~v~~~~vlh~~~~------------------------------------~~~~~~l~~~~~~L~p 266 (332)
T 3i53_A 225 VGSFF-DPLPA-GAGGYVLSAVLHDWDD------------------------------------LSAVAILRRCAEAAGS 266 (332)
T ss_dssp ECCTT-SCCCC-SCSEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHHTT
T ss_pred cCCCC-CCCCC-CCcEEEEehhhccCCH------------------------------------HHHHHHHHHHHHhcCC
Confidence 45566 34565 8999999999996432 1355789999999999
Q ss_pred CceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEE
Q 017702 218 GGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEK 297 (367)
Q Consensus 218 GG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~ 297 (367)
||++++.-.. .++..+ ...++. .-|+..+ -..++.+|+++++++.| |++.++..
T Consensus 267 gG~l~i~e~~-~~~~~~------~~~~d~-----~~~~~~~-------------~~~~t~~e~~~ll~~aG-f~~~~~~~ 320 (332)
T 3i53_A 267 GGVVLVIEAV-AGDEHA------GTGMDL-----RMLTYFG-------------GKERSLAELGELAAQAG-LAVRAAHP 320 (332)
T ss_dssp TCEEEEEECC-CC---C------CHHHHH-----HHHHHHS-------------CCCCCHHHHHHHHHHTT-EEEEEEEE
T ss_pred CCEEEEEeec-CCCCCc------cHHHHH-----HHHhhCC-------------CCCCCHHHHHHHHHHCC-CEEEEEEE
Confidence 9999987665 333211 112221 1121111 12679999999999997 99987754
|
| >3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A* | Back alignment and structure |
|---|
Probab=98.81 E-value=9.7e-08 Score=93.31 Aligned_cols=151 Identities=17% Similarity=0.232 Sum_probs=93.9
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHH---HhhcCC-ccccceeec
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNT---LFKSLP-HARKYFAAG 136 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~---lf~~l~-~~~~~f~~g 136 (367)
.+..+|+|+|||+|..+..+.+. .| ..+++.-|+|. -... .+.... ..+-.|
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~-----------------~p---~~~~~~~D~~~-~~~~a~~~~~~~~l~~~v~~--- 256 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDA-----------------FP---GLRGTLLERPP-VAEEARELLTGRGLADRCEI--- 256 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHH-----------------CT---TCEEEEEECHH-HHHHHHHHHHHTTCTTTEEE---
T ss_pred ccCcEEEEeCCCccHHHHHHHHH-----------------CC---CCeEEEEcCHH-HHHHHHHhhhhcCcCCceEE---
Confidence 45689999999999988776532 13 45678888852 1111 111111 111223
Q ss_pred cCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhc
Q 017702 137 LPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELV 216 (367)
Q Consensus 137 vp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~ 216 (367)
+.++|. .-+|. ++|++++..++|++++ .+...+|+.-++-|+
T Consensus 257 ~~~d~~-~~~p~-~~D~v~~~~vlh~~~d------------------------------------~~~~~~L~~~~~~L~ 298 (369)
T 3gwz_A 257 LPGDFF-ETIPD-GADVYLIKHVLHDWDD------------------------------------DDVVRILRRIATAMK 298 (369)
T ss_dssp EECCTT-TCCCS-SCSEEEEESCGGGSCH------------------------------------HHHHHHHHHHHTTCC
T ss_pred eccCCC-CCCCC-CceEEEhhhhhccCCH------------------------------------HHHHHHHHHHHHHcC
Confidence 334566 44565 8999999999998542 133468999999999
Q ss_pred cCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEE
Q 017702 217 PGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKME 296 (367)
Q Consensus 217 pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE 296 (367)
|||++++.-.. .++... .....++ +.-|+..| -..++.+|+++++++.| |++.++.
T Consensus 299 pgG~l~i~e~~-~~~~~~----~~~~~~d-----~~~~~~~~-------------g~~~t~~e~~~ll~~aG-f~~~~~~ 354 (369)
T 3gwz_A 299 PDSRLLVIDNL-IDERPA----ASTLFVD-----LLLLVLVG-------------GAERSESEFAALLEKSG-LRVERSL 354 (369)
T ss_dssp TTCEEEEEEEB-CCSSCC----HHHHHHH-----HHHHHHHS-------------CCCBCHHHHHHHHHTTT-EEEEEEE
T ss_pred CCCEEEEEEec-cCCCCC----CchhHhh-----HHHHhhcC-------------CccCCHHHHHHHHHHCC-CeEEEEE
Confidence 99999997765 443211 0011111 11122211 12578999999999997 9998875
Q ss_pred E
Q 017702 297 K 297 (367)
Q Consensus 297 ~ 297 (367)
.
T Consensus 355 ~ 355 (369)
T 3gwz_A 355 P 355 (369)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A* | Back alignment and structure |
|---|
Probab=98.81 E-value=2.9e-08 Score=91.57 Aligned_cols=103 Identities=15% Similarity=0.156 Sum_probs=68.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCccc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSF 141 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SF 141 (367)
+..+|+|+|||+|..+..+.+. ..+|+--|+...-....-+.++ +--|..+. +
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~----------------------~~~v~gvD~s~~~~~~a~~~~~--~~~~~~~d---~ 102 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADS----------------------FGTVEGLELSADMLAIARRRNP--DAVLHHGD---M 102 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTT----------------------SSEEEEEESCHHHHHHHHHHCT--TSEEEECC---T
T ss_pred CCCcEEEeCCcCCHHHHHHHHc----------------------CCeEEEEECCHHHHHHHHhhCC--CCEEEECC---h
Confidence 4579999999999998876511 1146777775322222212222 22244443 2
Q ss_pred cccCCCCCceeEEEecc-ccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCce
Q 017702 142 HSRLFPRSSIHFVHTSY-ALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGL 220 (367)
Q Consensus 142 y~~l~P~~svd~~~S~~-alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~ 220 (367)
.+ +.+++++|+|+|+. ++||+.. ..|+..+|+.-++-|+|||+
T Consensus 103 ~~-~~~~~~fD~v~~~~~~l~~~~~-----------------------------------~~~~~~~l~~~~~~L~pgG~ 146 (263)
T 3pfg_A 103 RD-FSLGRRFSAVTCMFSSIGHLAG-----------------------------------QAELDAALERFAAHVLPDGV 146 (263)
T ss_dssp TT-CCCSCCEEEEEECTTGGGGSCH-----------------------------------HHHHHHHHHHHHHTEEEEEE
T ss_pred HH-CCccCCcCEEEEcCchhhhcCC-----------------------------------HHHHHHHHHHHHHhcCCCcE
Confidence 22 33378999999998 9999642 13667899999999999999
Q ss_pred EEEEeec
Q 017702 221 MVLILAA 227 (367)
Q Consensus 221 lvl~~~g 227 (367)
|++....
T Consensus 147 l~i~~~~ 153 (263)
T 3pfg_A 147 VVVEPWW 153 (263)
T ss_dssp EEECCCC
T ss_pred EEEEecc
Confidence 9998654
|
| >1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43 | Back alignment and structure |
|---|
Probab=98.79 E-value=3.6e-08 Score=89.14 Aligned_cols=105 Identities=12% Similarity=0.201 Sum_probs=67.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCcc--ccceeeccCc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHA--RKYFAAGLPG 139 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~--~~~f~~gvp~ 139 (367)
+..+|+|+|||+|..+..+.+. ..+++.-|...+-....-+.+... +-.|..+
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~----------------------~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~--- 91 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK----------------------FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQ--- 91 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG----------------------SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECC---
T ss_pred CCCeEEEeCCCCCHHHHHHHHC----------------------CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEec---
Confidence 4579999999999999877521 124666676533222211111110 1123322
Q ss_pred cccccCCCCCceeEEEecc-ccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccC
Q 017702 140 SFHSRLFPRSSIHFVHTSY-ALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPG 218 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~-alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 218 (367)
++..-.++ +++|+++++. ++||+... .|...+|+.-++-|+||
T Consensus 92 d~~~~~~~-~~fD~v~~~~~~l~~~~~~-----------------------------------~~~~~~l~~~~~~L~pg 135 (246)
T 1y8c_A 92 DISNLNIN-RKFDLITCCLDSTNYIIDS-----------------------------------DDLKKYFKAVSNHLKEG 135 (246)
T ss_dssp CGGGCCCS-CCEEEEEECTTGGGGCCSH-----------------------------------HHHHHHHHHHHTTEEEE
T ss_pred ccccCCcc-CCceEEEEcCccccccCCH-----------------------------------HHHHHHHHHHHHhcCCC
Confidence 33332344 8999999998 99996321 26667999999999999
Q ss_pred ceEEEEeec
Q 017702 219 GLMVLILAA 227 (367)
Q Consensus 219 G~lvl~~~g 227 (367)
|++++.+..
T Consensus 136 G~l~~~~~~ 144 (246)
T 1y8c_A 136 GVFIFDINS 144 (246)
T ss_dssp EEEEEEEEC
T ss_pred cEEEEEecC
Confidence 999998775
|
| >3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A* | Back alignment and structure |
|---|
Probab=98.79 E-value=3.2e-07 Score=89.73 Aligned_cols=154 Identities=18% Similarity=0.168 Sum_probs=94.7
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCcc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGS 140 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~S 140 (367)
.+..+|+|+|||+|..+..+.+.. | .++++.-|+|. .........+ +.-+.|+
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~-----------------p---~~~~~~~D~~~-----~~~~a~~~~~--v~~~~~d 254 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKY-----------------P---SINAINFDLPH-----VIQDAPAFSG--VEHLGGD 254 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHC-----------------T---TCEEEEEECHH-----HHTTCCCCTT--EEEEECC
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhC-----------------C---CCEEEEEehHH-----HHHhhhhcCC--CEEEecC
Confidence 346899999999999998876322 3 45788888852 2222221111 2224456
Q ss_pred ccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCce
Q 017702 141 FHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGL 220 (367)
Q Consensus 141 Fy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~ 220 (367)
|++ -+|++ |++++..++|++++ .+...+|+..++-|+|||+
T Consensus 255 ~~~-~~p~~--D~v~~~~vlh~~~~------------------------------------~~~~~~l~~~~~~L~pgG~ 295 (368)
T 3reo_A 255 MFD-GVPKG--DAIFIKWICHDWSD------------------------------------EHCLKLLKNCYAALPDHGK 295 (368)
T ss_dssp TTT-CCCCC--SEEEEESCGGGBCH------------------------------------HHHHHHHHHHHHHSCTTCE
T ss_pred CCC-CCCCC--CEEEEechhhcCCH------------------------------------HHHHHHHHHHHHHcCCCCE
Confidence 776 56755 99999999996431 2455789999999999999
Q ss_pred EEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEE
Q 017702 221 MVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKL 298 (367)
Q Consensus 221 lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~ 298 (367)
+++.-.. .++... . ..........+ +.-|+. ...-..++.+|+++++++.| |++.++...
T Consensus 296 l~i~e~~-~~~~~~-~--~~~~~~~~~~d-~~~~~~------------~~~g~~rt~~e~~~ll~~AG-F~~v~~~~~ 355 (368)
T 3reo_A 296 VIVAEYI-LPPSPD-P--SIATKVVIHTD-ALMLAY------------NPGGKERTEKEFQALAMASG-FRGFKVASC 355 (368)
T ss_dssp EEEEECC-CCSSCC-C--CHHHHHHHHHH-HHHHHH------------SSBCCCCCHHHHHHHHHHTT-CCEEEEEEE
T ss_pred EEEEEec-cCCCCC-C--chhhhHHHhhh-HHHHhh------------cCCCccCCHHHHHHHHHHCC-CeeeEEEEe
Confidence 9887654 333211 0 00000001111 111211 01122578999999999997 998877654
|
| >3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.79 E-value=2.3e-08 Score=94.39 Aligned_cols=177 Identities=18% Similarity=0.188 Sum_probs=100.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHH---hhcC--Cccccceeec
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTL---FKSL--PHARKYFAAG 136 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~l---f~~l--~~~~~~f~~g 136 (367)
+..+|+|+|||+|..+..+.+.+ .+ ..+|+-.|+...-.... ++.. ...+--|..+
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~----------------~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~ 96 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQEL----------------KP---FEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKIS 96 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHS----------------SC---CSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEEC
T ss_pred CCCEEEEECCCCCHHHHHHHHhC----------------CC---CCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEc
Confidence 46899999999999999887322 01 23567777653221111 1111 0112223333
Q ss_pred cCccccccCCCC------CceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHH
Q 017702 137 LPGSFHSRLFPR------SSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNA 210 (367)
Q Consensus 137 vp~SFy~~l~P~------~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~ 210 (367)
. +.+-.++. +++|+|+|+.++||+ +. ..+|+.
T Consensus 97 d---~~~~~~~~~~~~~~~~fD~V~~~~~l~~~-~~--------------------------------------~~~l~~ 134 (299)
T 3g5t_A 97 S---SDDFKFLGADSVDKQKIDMITAVECAHWF-DF--------------------------------------EKFQRS 134 (299)
T ss_dssp C---TTCCGGGCTTTTTSSCEEEEEEESCGGGS-CH--------------------------------------HHHHHH
T ss_pred C---HHhCCccccccccCCCeeEEeHhhHHHHh-CH--------------------------------------HHHHHH
Confidence 3 22222344 899999999999997 22 258888
Q ss_pred HHHhhccCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCccc-CCHHHHHHHHHhCCc
Q 017702 211 RAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYN-ATPKELEAIIRTNGN 289 (367)
Q Consensus 211 Ra~EL~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~-~s~eE~~~~l~~~g~ 289 (367)
-++-|+|||.|++...+ .+..... ..+...+.++.... ....|+.. |..+.+++.+++.|
T Consensus 135 ~~~~LkpgG~l~i~~~~-~~~~~~~---------~~~~~~~~~~~~~~--------~~~~~~w~~p~~~~~~~~l~~~g- 195 (299)
T 3g5t_A 135 AYANLRKDGTIAIWGYA-DPIFPDY---------PEFDDLMIEVPYGK--------QGLGPYWEQPGRSRLRNMLKDSH- 195 (299)
T ss_dssp HHHHEEEEEEEEEEEEE-EEECTTC---------GGGTTHHHHHHHCT--------TTTGGGSCTTHHHHHHTTTTTCC-
T ss_pred HHHhcCCCcEEEEEecC-CccccCc---------HHHHHHHHHhccCc--------ccccchhhchhhHHHHHhhhccC-
Confidence 89999999999997765 3211000 01111222222110 12234444 88888899988876
Q ss_pred e-----EEeEEEEEec------------C------CCCCCHHHHHHhHHhhh
Q 017702 290 F-----TIEKMEKLSQ------------P------RRRITANEYASGIRAGI 318 (367)
Q Consensus 290 F-----~I~~lE~~~~------------p------~~~~~~~~v~~~iRa~~ 318 (367)
| +=.....+.. . ....+-..+.+++|++.
T Consensus 196 fp~~~f~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t~s 247 (299)
T 3g5t_A 196 LDPELFHDIQVSYFCAEDVRDKVKLHQHTKKPLLIRKQVTLVEFADYVRTWS 247 (299)
T ss_dssp CCTTTEEEEEEEEECGGGGGCHHHHHHCSSCCCCCEEEECHHHHHHHHTTSH
T ss_pred CChHHcCcceEEEecccccccccccccCCCCceeeeccccHHHHHHHHHHhH
Confidence 5 3333333422 1 00124568889999765
|
| >3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A* | Back alignment and structure |
|---|
Probab=98.78 E-value=1.3e-08 Score=96.04 Aligned_cols=164 Identities=16% Similarity=0.167 Sum_probs=94.1
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc------cccceeecc
Q 017702 64 FKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH------ARKYFAAGL 137 (367)
Q Consensus 64 ~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~------~~~~f~~gv 137 (367)
.+|+|+|||+|..+..+.+. ..+|+-.|+...-....-+.+.. .+--|..+.
T Consensus 84 ~~vLDlGcG~G~~~~~l~~~----------------------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d 141 (299)
T 3g2m_A 84 GPVLELAAGMGRLTFPFLDL----------------------GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGD 141 (299)
T ss_dssp SCEEEETCTTTTTHHHHHTT----------------------TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECB
T ss_pred CcEEEEeccCCHHHHHHHHc----------------------CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCc
Confidence 39999999999999987621 12456666643222211111111 112244443
Q ss_pred CccccccCCCCCceeEEE-eccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhc
Q 017702 138 PGSFHSRLFPRSSIHFVH-TSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELV 216 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~-S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~ 216 (367)
+.+ +.+++++|+|+ ++.++||++. .|...+|+.-++-|+
T Consensus 142 ---~~~-~~~~~~fD~v~~~~~~~~~~~~------------------------------------~~~~~~l~~~~~~L~ 181 (299)
T 3g2m_A 142 ---MSA-FALDKRFGTVVISSGSINELDE------------------------------------ADRRGLYASVREHLE 181 (299)
T ss_dssp ---TTB-CCCSCCEEEEEECHHHHTTSCH------------------------------------HHHHHHHHHHHHHEE
T ss_pred ---hhc-CCcCCCcCEEEECCcccccCCH------------------------------------HHHHHHHHHHHHHcC
Confidence 222 33378999888 5578888541 256679999999999
Q ss_pred cCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCC---CC--------------------HhhhhccCCCcc
Q 017702 217 PGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGV---LS--------------------EEKVDSFNLPTY 273 (367)
Q Consensus 217 pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~---i~--------------------~~~~d~f~~P~y 273 (367)
|||+|++..+. .+...... ....+. +.. ..|. +. ...+..+...+.
T Consensus 182 pgG~l~~~~~~-~~~~~~~~---~~~~~~-----~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (299)
T 3g2m_A 182 PGGKFLLSLAM-SEAAESEP---LERKQE-----LPG--RSGRRYVLHVRHLPAEEIQEITIHPADETTDPFVVCTHRRR 250 (299)
T ss_dssp EEEEEEEEEEC-CHHHHSCC---CCC--------------------CCEEEEEEEEEEEEEEEESCC--CCCCEEEEEEE
T ss_pred CCcEEEEEeec-Cccccccc---hhccce-----eec--CCCcEEEEEEEEeccccEEEEEEEeccCCCCcEEEEEEEEE
Confidence 99999999987 32110000 000000 000 0010 00 000111233455
Q ss_pred cCCHHHHHHHHHhCCceEEeEEEEEecC
Q 017702 274 NATPKELEAIIRTNGNFTIEKMEKLSQP 301 (367)
Q Consensus 274 ~~s~eE~~~~l~~~g~F~I~~lE~~~~p 301 (367)
+.+++|+++++++.| |+++..+.+..+
T Consensus 251 ~~t~~el~~ll~~aG-F~v~~~~~~~~~ 277 (299)
T 3g2m_A 251 LLAPDQVVRELVRSG-FDVIAQTPFASG 277 (299)
T ss_dssp EECHHHHHHHHHHTT-CEEEEEEEECTT
T ss_pred EeCHHHHHHHHHHCC-CEEEEEEecCCC
Confidence 779999999999997 999999888654
|
| >2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca} | Back alignment and structure |
|---|
Probab=98.77 E-value=1.9e-07 Score=87.78 Aligned_cols=87 Identities=17% Similarity=0.170 Sum_probs=60.1
Q ss_pred CCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEEEEe
Q 017702 146 FPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLIL 225 (367)
Q Consensus 146 ~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~ 225 (367)
++.+++|+++++.+|||+.+- +...+|+.-++-|+|||+|++..
T Consensus 153 ~d~~~~d~v~~~~vlh~~~d~------------------------------------~~~~~l~~~~~~L~pGG~l~i~~ 196 (274)
T 2qe6_A 153 IDFSRPAAIMLVGMLHYLSPD------------------------------------VVDRVVGAYRDALAPGSYLFMTS 196 (274)
T ss_dssp CCTTSCCEEEETTTGGGSCTT------------------------------------THHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCCCCCEEEEEechhhhCCcH------------------------------------HHHHHHHHHHHhCCCCcEEEEEE
Confidence 555689999999999997642 34468999999999999999999
Q ss_pred ecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEE
Q 017702 226 AAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKM 295 (367)
Q Consensus 226 ~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~l 295 (367)
+. .+. + ..++.+.+.+.. ...|+++++.+|+.+++ .| |++...
T Consensus 197 ~~-~~~--~-------~~~~~~~~~~~~--------------~~~~~~~~s~~ei~~~l--~G-~~l~~~ 239 (274)
T 2qe6_A 197 LV-DTG--L-------PAQQKLARITRE--------------NLGEGWARTPEEIERQF--GD-FELVEP 239 (274)
T ss_dssp EB-CSS--C-------HHHHHHHHHHHH--------------HHSCCCCBCHHHHHHTT--TT-CEECTT
T ss_pred ec-Ccc--h-------HHHHHHHHHHHh--------------cCCCCccCCHHHHHHHh--CC-CeEccC
Confidence 87 432 1 001212222221 11267789999999999 34 888653
|
| >3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A* | Back alignment and structure |
|---|
Probab=98.77 E-value=3.4e-07 Score=89.47 Aligned_cols=153 Identities=18% Similarity=0.189 Sum_probs=95.2
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCcc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGS 140 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~S 140 (367)
.+..+|+|+|||+|..+..+++.. | .++++.-|+|. .........+ +.-+.++
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~-----------------p---~~~~~~~D~~~-----~~~~a~~~~~--v~~~~~D 252 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHY-----------------P---TIKGVNFDLPH-----VISEAPQFPG--VTHVGGD 252 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHC-----------------T---TCEEEEEECHH-----HHTTCCCCTT--EEEEECC
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHC-----------------C---CCeEEEecCHH-----HHHhhhhcCC--eEEEeCC
Confidence 346899999999999988776322 3 45788888862 2222222111 2234456
Q ss_pred ccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCce
Q 017702 141 FHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGL 220 (367)
Q Consensus 141 Fy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~ 220 (367)
|++ -+|++ |++++.+++|.+++ .|...+|+..++-|+|||+
T Consensus 253 ~~~-~~p~~--D~v~~~~vlh~~~d------------------------------------~~~~~~L~~~~~~L~pgG~ 293 (364)
T 3p9c_A 253 MFK-EVPSG--DTILMKWILHDWSD------------------------------------QHCATLLKNCYDALPAHGK 293 (364)
T ss_dssp TTT-CCCCC--SEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHSCTTCE
T ss_pred cCC-CCCCC--CEEEehHHhccCCH------------------------------------HHHHHHHHHHHHHcCCCCE
Confidence 777 56765 99999999985331 2556799999999999999
Q ss_pred EEEEeecccCCCCCCCCCchhhHHHH-HHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEE
Q 017702 221 MVLILAAVVPDGIPLSNSYVGVFNNI-LGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKL 298 (367)
Q Consensus 221 lvl~~~g~~~n~~~~~~~~~~~~~~~-l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~ 298 (367)
+++.-.. .++.... ...... ...-+.-|+. ...--.++.+|+++++++.| |++.++...
T Consensus 294 l~i~e~~-~~~~~~~-----~~~~~~~~~~d~~m~~~------------~~~g~~rt~~e~~~ll~~AG-F~~v~~~~~ 353 (364)
T 3p9c_A 294 VVLVQCI-LPVNPEA-----NPSSQGVFHVDMIMLAH------------NPGGRERYEREFQALARGAG-FTGVKSTYI 353 (364)
T ss_dssp EEEEECC-BCSSCCS-----SHHHHHHHHHHHHHHHH------------CSSCCCCBHHHHHHHHHHTT-CCEEEEEEE
T ss_pred EEEEEec-cCCCCCc-----chhhhhHHHhHHHHHhc------------ccCCccCCHHHHHHHHHHCC-CceEEEEEc
Confidence 9887654 3332100 001110 0011122211 01112578999999999997 998877654
|
| >2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A | Back alignment and structure |
|---|
Probab=98.76 E-value=3.2e-08 Score=87.40 Aligned_cols=141 Identities=13% Similarity=0.095 Sum_probs=89.6
Q ss_pred EEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc--cccceeeccCcccc
Q 017702 65 KIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH--ARKYFAAGLPGSFH 142 (367)
Q Consensus 65 ~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~--~~~~f~~gvp~SFy 142 (367)
+|+|+|||+|..+..+.+. ..+++.-|....-....-+.+.. .+-.|..+ ++.
T Consensus 32 ~vLdiGcG~G~~~~~l~~~----------------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~---d~~ 86 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL----------------------GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQS---NLA 86 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT----------------------TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECC---BTT
T ss_pred CEEEECCCCCHhHHHHHhC----------------------CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEc---Chh
Confidence 9999999999998776521 12566767653222211111110 01122222 333
Q ss_pred ccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEE
Q 017702 143 SRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMV 222 (367)
Q Consensus 143 ~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lv 222 (367)
.--+|++++|+++++. .|| +. .|...+|+.-.+-|+|||+++
T Consensus 87 ~~~~~~~~fD~v~~~~-~~~----~~---------------------------------~~~~~~l~~~~~~L~pgG~l~ 128 (202)
T 2kw5_A 87 DFDIVADAWEGIVSIF-CHL----PS---------------------------------SLRQQLYPKVYQGLKPGGVFI 128 (202)
T ss_dssp TBSCCTTTCSEEEEEC-CCC----CH---------------------------------HHHHHHHHHHHTTCCSSEEEE
T ss_pred hcCCCcCCccEEEEEh-hcC----CH---------------------------------HHHHHHHHHHHHhcCCCcEEE
Confidence 3346778999999953 344 11 256678999999999999999
Q ss_pred EEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEEecC
Q 017702 223 LILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLSQP 301 (367)
Q Consensus 223 l~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~~~p 301 (367)
+..+. ..+.. + ..| ....+.++++.+|++++++ | |++..++....+
T Consensus 129 ~~~~~-~~~~~-----------------~----~~~--------~~~~~~~~~~~~~l~~~l~--G-f~v~~~~~~~~~ 174 (202)
T 2kw5_A 129 LEGFA-PEQLQ-----------------Y----NTG--------GPKDLDLLPKLETLQSELP--S-LNWLIANNLERN 174 (202)
T ss_dssp EEEEC-TTTGG-----------------G----TSC--------CSSSGGGCCCHHHHHHHCS--S-SCEEEEEEEEEE
T ss_pred EEEec-ccccc-----------------C----CCC--------CCCcceeecCHHHHHHHhc--C-ceEEEEEEEEee
Confidence 99987 43310 0 011 1123567899999999998 5 999999887765
|
| >3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=98.76 E-value=6.4e-08 Score=83.10 Aligned_cols=133 Identities=15% Similarity=0.150 Sum_probs=88.1
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCcc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGS 140 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~S 140 (367)
.+..+|+|+|||+|..+..+.+.. . +++--|+...-....-+..+ +-.|..+.
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~---------------------~-~v~~vD~s~~~~~~a~~~~~--~v~~~~~d--- 68 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFA---------------------T-KLYCIDINVIALKEVKEKFD--SVITLSDP--- 68 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTE---------------------E-EEEEECSCHHHHHHHHHHCT--TSEEESSG---
T ss_pred CCCCeEEEECCCCCHHHHHHHhhc---------------------C-eEEEEeCCHHHHHHHHHhCC--CcEEEeCC---
Confidence 345799999999999998776211 2 57777775422222222211 12233333
Q ss_pred ccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCce
Q 017702 141 FHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGL 220 (367)
Q Consensus 141 Fy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~ 220 (367)
.-+|++++|+++++.++||+. |...+|+.-.+-|+|||+
T Consensus 69 ---~~~~~~~~D~v~~~~~l~~~~--------------------------------------~~~~~l~~~~~~L~pgG~ 107 (170)
T 3i9f_A 69 ---KEIPDNSVDFILFANSFHDMD--------------------------------------DKQHVISEVKRILKDDGR 107 (170)
T ss_dssp ---GGSCTTCEEEEEEESCSTTCS--------------------------------------CHHHHHHHHHHHEEEEEE
T ss_pred ---CCCCCCceEEEEEccchhccc--------------------------------------CHHHHHHHHHHhcCCCCE
Confidence 335788999999999999964 233588888899999999
Q ss_pred EEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEE
Q 017702 221 MVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKL 298 (367)
Q Consensus 221 lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~ 298 (367)
+++..+. ..+... + .......+.++++++++ | |++.+....
T Consensus 108 l~~~~~~-~~~~~~-----------------------~----------~~~~~~~~~~~~~~~l~--G-f~~~~~~~~ 148 (170)
T 3i9f_A 108 VIIIDWR-KENTGI-----------------------G----------PPLSIRMDEKDYMGWFS--N-FVVEKRFNP 148 (170)
T ss_dssp EEEEEEC-SSCCSS-----------------------S----------SCGGGCCCHHHHHHHTT--T-EEEEEEECS
T ss_pred EEEEEcC-cccccc-----------------------C----------chHhhhcCHHHHHHHHh--C-cEEEEccCC
Confidence 9999887 443210 0 00122468999999998 5 999877654
|
| >4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A* | Back alignment and structure |
|---|
Probab=98.75 E-value=1e-07 Score=92.78 Aligned_cols=153 Identities=17% Similarity=0.174 Sum_probs=94.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhc-CCccccceeeccCcc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKS-LPHARKYFAAGLPGS 140 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~-l~~~~~~f~~gvp~S 140 (367)
..-+|+|+|||+|..++.+++. .| .++++.-|+|.- -...+. +.....--+.-++|+
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~-----------------~p---~~~~~~~dlp~v--~~~a~~~~~~~~~~rv~~~~gD 236 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSL-----------------YP---GCKITVFDIPEV--VWTAKQHFSFQEEEQIDFQEGD 236 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHH-----------------CS---SCEEEEEECHHH--HHHHHHHSCC--CCSEEEEESC
T ss_pred cCCeEEeeCCCCCHHHHHHHHh-----------------CC---CceeEeccCHHH--HHHHHHhhhhcccCceeeecCc
Confidence 4569999999999988877622 24 567888899841 111111 111111113335677
Q ss_pred ccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCce
Q 017702 141 FHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGL 220 (367)
Q Consensus 141 Fy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~ 220 (367)
|++..+| ..|+++....||-.++ .+-..+|+..++.|+|||+
T Consensus 237 ~~~~~~~--~~D~~~~~~vlh~~~d------------------------------------~~~~~iL~~~~~al~pgg~ 278 (353)
T 4a6d_A 237 FFKDPLP--EADLYILARVLHDWAD------------------------------------GKCSHLLERIYHTCKPGGG 278 (353)
T ss_dssp TTTSCCC--CCSEEEEESSGGGSCH------------------------------------HHHHHHHHHHHHHCCTTCE
T ss_pred cccCCCC--CceEEEeeeecccCCH------------------------------------HHHHHHHHHHHhhCCCCCE
Confidence 9876444 4699999999994221 2345689999999999999
Q ss_pred EEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEE
Q 017702 221 MVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKME 296 (367)
Q Consensus 221 lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE 296 (367)
+++.=.. .++... ......+.+ +.-|+.-| --.||.+||++++++.| |++.++.
T Consensus 279 lli~e~~-~~~~~~------~~~~~~~~d-l~ml~~~~-------------g~ert~~e~~~ll~~AG-f~~v~v~ 332 (353)
T 4a6d_A 279 ILVIESL-LDEDRR------GPLLTQLYS-LNMLVQTE-------------GQERTPTHYHMLLSSAG-FRDFQFK 332 (353)
T ss_dssp EEEEECC-CCTTSC------CCHHHHHHH-HHHHHSSS-------------CCCCCHHHHHHHHHHHT-CEEEEEE
T ss_pred EEEEEee-eCCCCC------CCHHHHHHH-HHHHHhCC-------------CcCCCHHHHHHHHHHCC-CceEEEE
Confidence 8886554 222110 111121111 22222111 12589999999999997 9987764
|
| >2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus} | Back alignment and structure |
|---|
Probab=98.75 E-value=6e-08 Score=92.63 Aligned_cols=114 Identities=11% Similarity=0.190 Sum_probs=65.3
Q ss_pred CCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEEEEe
Q 017702 146 FPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLIL 225 (367)
Q Consensus 146 ~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~ 225 (367)
+|++++|+|.|..++||+-..+ |...+|+.-++-|||||+|++.+
T Consensus 125 ~~~~~FD~V~~~~~lhy~~~~~-----------------------------------~~~~~l~~~~r~LkpGG~~i~~~ 169 (302)
T 2vdw_A 125 FYFGKFNIIDWQFAIHYSFHPR-----------------------------------HYATVMNNLSELTASGGKVLITT 169 (302)
T ss_dssp CCSSCEEEEEEESCGGGTCSTT-----------------------------------THHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCCeeEEEECchHHHhCCHH-----------------------------------HHHHHHHHHHHHcCCCCEEEEEe
Confidence 5778999999999999964322 23468999999999999999998
Q ss_pred ecccCCCCCCCCCchhhHHHH-HHHHHHHHHHcCCCCHhh-------hhccCCCcccCCHHHHHHHHHhCCceEEeEEEE
Q 017702 226 AAVVPDGIPLSNSYVGVFNNI-LGSCFNDLAKMGVLSEEK-------VDSFNLPTYNATPKELEAIIRTNGNFTIEKMEK 297 (367)
Q Consensus 226 ~g~~~n~~~~~~~~~~~~~~~-l~~al~~m~~eG~i~~~~-------~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~ 297 (367)
+. +..-..........++.. . .+......+.++.+. ......|-|+.+++|+.+++++.| |++.....
T Consensus 170 ~~-~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~v~~~el~~l~~~~G-l~lv~~~~ 245 (302)
T 2vdw_A 170 MD-GDKLSKLTDKKTFIIHKNLP--SSENYMSVEKIADDRIVVYNPSTMSTPMTEYIIKKNDIVRVFNEYG-FVLVDNVD 245 (302)
T ss_dssp EC-HHHHTTCCSCEEEECCSSSC--TTTSEEEECEEETTEEEEBCTTTBSSCEEEECCCHHHHHHHHHHTT-EEEEEEEE
T ss_pred CC-HHHHHHHHhcCCcccccccc--cccceeeeccccccccceeeccccCCCceeeeeEHHHHHHHHHHCC-CEEEEecC
Confidence 85 211000000000000000 0 000000000000000 001234667888999999999997 99988765
Q ss_pred E
Q 017702 298 L 298 (367)
Q Consensus 298 ~ 298 (367)
+
T Consensus 246 f 246 (302)
T 2vdw_A 246 F 246 (302)
T ss_dssp H
T ss_pred h
Confidence 5
|
| >3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A | Back alignment and structure |
|---|
Probab=98.75 E-value=9.9e-08 Score=89.49 Aligned_cols=105 Identities=17% Similarity=0.186 Sum_probs=68.7
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHh---hcCCccccceeecc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLF---KSLPHARKYFAAGL 137 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf---~~l~~~~~~f~~gv 137 (367)
.+..+|+|+|||+|..+..+.+.. ++ ..+|+-.|+...-....- ...+. +--|..+.
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~----------------~~---~~~v~gvD~s~~~~~~a~~~~~~~~~-~v~~~~~d 80 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLL----------------PE---GSKYTGIDSGETLLAEARELFRLLPY-DSEFLEGD 80 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTS----------------CT---TCEEEEEESCHHHHHHHHHHHHSSSS-EEEEEESC
T ss_pred CCCCeEEEecCCCCHHHHHHHHhC----------------CC---CCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcc
Confidence 456899999999999888775221 11 136788887543222111 11221 22344443
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
+.+ +.+++++|+|++..++|++. |+..+|+.-.+-|+|
T Consensus 81 ---~~~-~~~~~~fD~v~~~~~l~~~~--------------------------------------~~~~~l~~~~~~Lkp 118 (284)
T 3gu3_A 81 ---ATE-IELNDKYDIAICHAFLLHMT--------------------------------------TPETMLQKMIHSVKK 118 (284)
T ss_dssp ---TTT-CCCSSCEEEEEEESCGGGCS--------------------------------------SHHHHHHHHHHTEEE
T ss_pred ---hhh-cCcCCCeeEEEECChhhcCC--------------------------------------CHHHHHHHHHHHcCC
Confidence 233 33357999999999999964 344688888899999
Q ss_pred CceEEEEeec
Q 017702 218 GGLMVLILAA 227 (367)
Q Consensus 218 GG~lvl~~~g 227 (367)
||++++..+.
T Consensus 119 gG~l~~~~~~ 128 (284)
T 3gu3_A 119 GGKIICFEPH 128 (284)
T ss_dssp EEEEEEEECC
T ss_pred CCEEEEEecc
Confidence 9999987653
|
| >3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A* | Back alignment and structure |
|---|
Probab=98.74 E-value=1.5e-07 Score=88.82 Aligned_cols=158 Identities=18% Similarity=0.221 Sum_probs=91.8
Q ss_pred CCceEEeeecCCC--CcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccch---HHHhhcCCccccceee
Q 017702 61 LKPFKIADLGCSV--GPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDF---NTLFKSLPHARKYFAA 135 (367)
Q Consensus 61 ~~~~~IaD~GCs~--G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDF---n~lf~~l~~~~~~f~~ 135 (367)
.+.-+|+|+|||+ |.|+..+++.+ .| +.+|+..|....-- ..++...+..+--|+.
T Consensus 77 ~g~~q~LDLGcG~pT~~~~~~la~~~----------------~P---~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~ 137 (277)
T 3giw_A 77 AGIRQFLDIGTGIPTSPNLHEIAQSV----------------AP---ESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVE 137 (277)
T ss_dssp SCCCEEEEESCCSCCSSCHHHHHHHH----------------CT---TCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEE
T ss_pred cCCCEEEEeCCCCCcccHHHHHHHHH----------------CC---CCEEEEEeCChHHHHHHHHHhccCCCCcEEEEE
Confidence 3567999999998 77888776544 23 44677777642110 1111111111233555
Q ss_pred ccCccccccCC-C--CCcee-----EEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHH
Q 017702 136 GLPGSFHSRLF-P--RSSIH-----FVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESF 207 (367)
Q Consensus 136 gvp~SFy~~l~-P--~~svd-----~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~f 207 (367)
+.-...-..+- | .+++| .++|+.+||||.+-. |....
T Consensus 138 aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~-----------------------------------~p~~~ 182 (277)
T 3giw_A 138 ADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDED-----------------------------------DAVGI 182 (277)
T ss_dssp CCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGG-----------------------------------CHHHH
T ss_pred ecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchh-----------------------------------hHHHH
Confidence 55332210000 1 23444 588999999976421 23457
Q ss_pred HHHHHHhhccCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhC
Q 017702 208 LNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTN 287 (367)
Q Consensus 208 L~~Ra~EL~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~ 287 (367)
|+.-.+-|+|||+|+++.++ .+. .+ .-.+.+.+.++ .. ..|+.++|.+|+.+.+.
T Consensus 183 l~~l~~~L~PGG~Lvls~~~-~d~-~p-------~~~~~~~~~~~---~~-----------g~p~~~rs~~ei~~~f~-- 237 (277)
T 3giw_A 183 VRRLLEPLPSGSYLAMSIGT-AEF-AP-------QEVGRVAREYA---AR-----------NMPMRLRTHAEAEEFFE-- 237 (277)
T ss_dssp HHHHHTTSCTTCEEEEEEEC-CTT-SH-------HHHHHHHHHHH---HT-----------TCCCCCCCHHHHHHTTT--
T ss_pred HHHHHHhCCCCcEEEEEecc-CCC-CH-------HHHHHHHHHHH---hc-----------CCCCccCCHHHHHHHhC--
Confidence 88888999999999999987 432 11 00122222222 22 34788999999999994
Q ss_pred CceEEeEEEEE
Q 017702 288 GNFTIEKMEKL 298 (367)
Q Consensus 288 g~F~I~~lE~~ 298 (367)
| |++..-...
T Consensus 238 G-lelvePG~v 247 (277)
T 3giw_A 238 G-LELVEPGIV 247 (277)
T ss_dssp T-SEECTTCSE
T ss_pred C-CcccCCcEe
Confidence 4 987654333
|
| >2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=98.71 E-value=1.1e-07 Score=90.80 Aligned_cols=155 Identities=18% Similarity=0.151 Sum_probs=93.6
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC----ccccceeec
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP----HARKYFAAG 136 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~----~~~~~f~~g 136 (367)
.+..+|+|+|||+|..+..+.+.. | ..+++.-|++ .-....-+.+. ..+--|..
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~-----------------p---~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~- 221 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHN-----------------P---NAEIFGVDWA-SVLEVAKENARIQGVASRYHTIA- 221 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHC-----------------T---TCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEE-
T ss_pred CCCCEEEEECCCcCHHHHHHHHHC-----------------C---CCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEe-
Confidence 456899999999998887665221 2 3478888886 32222111111 11122333
Q ss_pred cCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhc
Q 017702 137 LPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELV 216 (367)
Q Consensus 137 vp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~ 216 (367)
+++.+.-+|. .+|++++..++|.+++ .+...+|+.-.+-|+
T Consensus 222 --~d~~~~~~~~-~~D~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~L~ 262 (335)
T 2r3s_A 222 --GSAFEVDYGN-DYDLVLLPNFLHHFDV------------------------------------ATCEQLLRKIKTALA 262 (335)
T ss_dssp --SCTTTSCCCS-CEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHEE
T ss_pred --cccccCCCCC-CCcEEEEcchhccCCH------------------------------------HHHHHHHHHHHHhCC
Confidence 3455433444 4999999999997531 245678999999999
Q ss_pred cCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEE
Q 017702 217 PGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKME 296 (367)
Q Consensus 217 pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE 296 (367)
|||++++.-.. .++... ...+..+.+. ..|... .....++.+|+++++++.| |++.++.
T Consensus 263 pgG~l~i~e~~-~~~~~~------~~~~~~~~~~-~~~~~~------------~~~~~~t~~~~~~ll~~aG-f~~~~~~ 321 (335)
T 2r3s_A 263 VEGKVIVFDFI-PNSDRI------TPPDAAAFSL-VMLATT------------PNGDAYTFAEYESMFSNAG-FSHSQLH 321 (335)
T ss_dssp EEEEEEEEECC-CCTTSS------CSHHHHHHHH-HHHHHS------------SSCCCCCHHHHHHHHHHTT-CSEEEEE
T ss_pred CCcEEEEEeec-CCCCcC------CchHHHHHHH-HHHeeC------------CCCCcCCHHHHHHHHHHCC-CCeeeEE
Confidence 99999888766 433211 0111211111 111111 0123679999999999997 9887765
Q ss_pred E
Q 017702 297 K 297 (367)
Q Consensus 297 ~ 297 (367)
.
T Consensus 322 ~ 322 (335)
T 2r3s_A 322 S 322 (335)
T ss_dssp C
T ss_pred E
Confidence 4
|
| >2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A* | Back alignment and structure |
|---|
Probab=98.70 E-value=3.2e-08 Score=90.77 Aligned_cols=86 Identities=19% Similarity=0.252 Sum_probs=62.6
Q ss_pred CceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEEEEeecc
Q 017702 149 SSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAAV 228 (367)
Q Consensus 149 ~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g~ 228 (367)
+++|+|+|+.++|++..- ..|+..+|+.-++-|+|||+|++....
T Consensus 156 ~~fD~v~~~~~l~~~~~~----------------------------------~~~~~~~l~~~~~~LkpgG~li~~~~~- 200 (265)
T 2i62_A 156 PPADCLLSTLCLDAACPD----------------------------------LPAYRTALRNLGSLLKPGGFLVMVDAL- 200 (265)
T ss_dssp CCEEEEEEESCHHHHCSS----------------------------------HHHHHHHHHHHHTTEEEEEEEEEEEES-
T ss_pred CCccEEEEhhhhhhhcCC----------------------------------hHHHHHHHHHHHhhCCCCcEEEEEecC-
Confidence 899999999999975421 125667899999999999999998865
Q ss_pred cCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEEec
Q 017702 229 VPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLSQ 300 (367)
Q Consensus 229 ~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~~~ 300 (367)
..+.. . .| ....+.+..+.+++.+++++.| |++..++....
T Consensus 201 ~~~~~-----------~-----------~~--------~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~~~ 241 (265)
T 2i62_A 201 KSSYY-----------M-----------IG--------EQKFSSLPLGWETVRDAVEEAG-YTIEQFEVISQ 241 (265)
T ss_dssp SCCEE-----------E-----------ET--------TEEEECCCCCHHHHHHHHHHTT-CEEEEEEEECC
T ss_pred CCceE-----------E-----------cC--------CccccccccCHHHHHHHHHHCC-CEEEEEEEecc
Confidence 22100 0 11 1112344678999999999997 99999887653
|
| >2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.70 E-value=5e-07 Score=86.45 Aligned_cols=149 Identities=18% Similarity=0.232 Sum_probs=92.0
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc----cccceeeccCc
Q 017702 64 FKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH----ARKYFAAGLPG 139 (367)
Q Consensus 64 ~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~----~~~~f~~gvp~ 139 (367)
.+|+|+|||+|..+..+.+. .| ..+++.-|+| .-....-+.+.. .+--| +.+
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~-----------------~p---~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~---~~~ 224 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQA-----------------EP---SARGVMLDRE-GSLGVARDNLSSLLAGERVSL---VGG 224 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHH-----------------CT---TCEEEEEECT-TCTHHHHHHTHHHHHTTSEEE---EES
T ss_pred CEEEEeCCCchHHHHHHHHH-----------------CC---CCEEEEeCcH-HHHHHHHHHHhhcCCCCcEEE---ecC
Confidence 89999999999888776522 13 3478888984 222222112211 11223 344
Q ss_pred cccccCCCCCceeEEEeccccc-cccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccC
Q 017702 140 SFHSRLFPRSSIHFVHTSYALH-WLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPG 218 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alh-WLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 218 (367)
+|.+ -+| +++|++++..++| | + + .+...+|+.-++-|+||
T Consensus 225 d~~~-~~~-~~~D~v~~~~vl~~~-~---~---------------------------------~~~~~~l~~~~~~L~pg 265 (334)
T 2ip2_A 225 DMLQ-EVP-SNGDIYLLSRIIGDL-D---E---------------------------------AASLRLLGNCREAMAGD 265 (334)
T ss_dssp CTTT-CCC-SSCSEEEEESCGGGC-C---H---------------------------------HHHHHHHHHHHHHSCTT
T ss_pred CCCC-CCC-CCCCEEEEchhccCC-C---H---------------------------------HHHHHHHHHHHHhcCCC
Confidence 5666 345 7899999999998 5 2 1 13356899999999999
Q ss_pred ceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEE
Q 017702 219 GLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKL 298 (367)
Q Consensus 219 G~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~ 298 (367)
|++++.-.. .++... . .+..+.+ +.-|...+ -..++.+|+++++++.| |++.++...
T Consensus 266 G~l~i~e~~-~~~~~~---~----~~~~~~~-~~~~~~~~-------------~~~~t~~e~~~ll~~aG-f~~~~~~~~ 322 (334)
T 2ip2_A 266 GRVVVIERT-ISASEP---S----PMSVLWD-VHLFMACA-------------GRHRTTEEVVDLLGRGG-FAVERIVDL 322 (334)
T ss_dssp CEEEEEECC-BCSSSC---C----HHHHHHH-HHHHHHHS-------------CCCCBHHHHHHHHHHTT-EEEEEEEEE
T ss_pred CEEEEEEec-cCCCCC---c----chhHHhh-hHhHhhCC-------------CcCCCHHHHHHHHHHCC-CceeEEEEC
Confidence 999988765 433211 0 1111111 11111111 12568999999999997 998877543
|
| >3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.69 E-value=1.4e-07 Score=92.06 Aligned_cols=157 Identities=17% Similarity=0.141 Sum_probs=93.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCcc--chHHHhhcCCc-cccceeeccC
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDN--DFNTLFKSLPH-ARKYFAAGLP 138 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~N--DFn~lf~~l~~-~~~~f~~gvp 138 (367)
+..+|+|+|||+|..+..+++.. | ..+++.-|+|.. .....+..... .+--| +.
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~-----------------p---~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~---~~ 235 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYN-----------------K---EVEVTIVDLPQQLEMMRKQTAGLSGSERIHG---HG 235 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHS-----------------T---TCEEEEEECHHHHHHHHHHHTTCTTGGGEEE---EE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhC-----------------C---CCEEEEEeCHHHHHHHHHHHHhcCcccceEE---EE
Confidence 45799999999999988776322 3 457888898631 11111111111 12223 34
Q ss_pred cccccc--CCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhc
Q 017702 139 GSFHSR--LFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELV 216 (367)
Q Consensus 139 ~SFy~~--l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~ 216 (367)
++|++. -+| +++|++++..++|.+++ .+...+|+..++-|+
T Consensus 236 ~d~~~~~~~~p-~~~D~v~~~~vlh~~~~------------------------------------~~~~~~l~~~~~~L~ 278 (363)
T 3dp7_A 236 ANLLDRDVPFP-TGFDAVWMSQFLDCFSE------------------------------------EEVISILTRVAQSIG 278 (363)
T ss_dssp CCCCSSSCCCC-CCCSEEEEESCSTTSCH------------------------------------HHHHHHHHHHHHHCC
T ss_pred ccccccCCCCC-CCcCEEEEechhhhCCH------------------------------------HHHHHHHHHHHHhcC
Confidence 556654 255 89999999999985331 245578999999999
Q ss_pred cCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEE
Q 017702 217 PGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKME 296 (367)
Q Consensus 217 pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE 296 (367)
|||++++.-.. .++... ....+.. ......|... ....-..++.+|+++++++.| |++.++.
T Consensus 279 pgG~l~i~e~~-~~~~~~-----~~~~~~~-~~~~~~~~~~----------~~~~~~~~t~~e~~~ll~~AG-f~~v~~~ 340 (363)
T 3dp7_A 279 KDSKVYIMETL-WDRQRY-----ETASYCL-TQISLYFTAM----------ANGNSKMFHSDDLIRCIENAG-LEVEEIQ 340 (363)
T ss_dssp TTCEEEEEECC-TTSCSS-----HHHHHHH-HHHHHHHHHS----------SCSSCCSCCHHHHHHHHHTTT-EEESCCC
T ss_pred CCcEEEEEeec-cCCccc-----cchhhHH-HHhhhhHHhh----------hCCCCcccCHHHHHHHHHHcC-CeEEEEE
Confidence 99999887654 332211 1111111 0011111100 011223579999999999997 9887653
|
| >3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A* | Back alignment and structure |
|---|
Probab=98.68 E-value=1.3e-07 Score=88.57 Aligned_cols=113 Identities=17% Similarity=0.219 Sum_probs=72.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC----Cc---ccccee
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL----PH---ARKYFA 134 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l----~~---~~~~f~ 134 (367)
+..+|+|+|||+|..+..+.+. ..+|+-.|+...--...-+.. .. .+-.+.
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~----------------------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~ 114 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEE----------------------GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIE 114 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHT----------------------TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHC----------------------CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEe
Confidence 3579999999999998877521 125777777643222221111 00 011123
Q ss_pred eccCccccccCCCCCceeEEEec-cccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHH
Q 017702 135 AGLPGSFHSRLFPRSSIHFVHTS-YALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAE 213 (367)
Q Consensus 135 ~gvp~SFy~~l~P~~svd~~~S~-~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~ 213 (367)
.+....+-+.+++++++|+|+|+ .++|++...... ..++..+|+.-++
T Consensus 115 ~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~-------------------------------~~~~~~~l~~~~~ 163 (293)
T 3thr_A 115 EANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGD-------------------------------QSEHRLALKNIAS 163 (293)
T ss_dssp ECCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSS-------------------------------SHHHHHHHHHHHH
T ss_pred ecChhhCccccccCCCeEEEEEcChHHhhcCccccC-------------------------------HHHHHHHHHHHHH
Confidence 33322211233788999999998 899997753321 1367789999999
Q ss_pred hhccCceEEEEeec
Q 017702 214 ELVPGGLMVLILAA 227 (367)
Q Consensus 214 EL~pGG~lvl~~~g 227 (367)
-|+|||+|++....
T Consensus 164 ~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 164 MVRPGGLLVIDHRN 177 (293)
T ss_dssp TEEEEEEEEEEEEC
T ss_pred HcCCCeEEEEEeCC
Confidence 99999999998864
|
| >3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.68 E-value=6.5e-08 Score=91.45 Aligned_cols=50 Identities=16% Similarity=0.242 Sum_probs=39.3
Q ss_pred CCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEEEEe
Q 017702 146 FPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLIL 225 (367)
Q Consensus 146 ~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~ 225 (367)
++++++|+|+|..++||+. ......++..+|+.-++-|+|||+|++..
T Consensus 173 ~~~~~fD~I~~~~vl~~ih--------------------------------l~~~~~~~~~~l~~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 173 AQTPEYDVVLCLSLTKWVH--------------------------------LNWGDEGLKRMFRRIYRHLRPGGILVLEP 220 (292)
T ss_dssp TCCCCEEEEEEESCHHHHH--------------------------------HHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccCCCcCEEEEChHHHHhh--------------------------------hcCCHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 4678999999999999953 01122467789999999999999999976
Q ss_pred ec
Q 017702 226 AA 227 (367)
Q Consensus 226 ~g 227 (367)
..
T Consensus 221 ~~ 222 (292)
T 3g07_A 221 QP 222 (292)
T ss_dssp CC
T ss_pred CC
Confidence 43
|
| >3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=5.8e-08 Score=86.65 Aligned_cols=106 Identities=15% Similarity=0.153 Sum_probs=71.1
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCcc-ccceeeccCc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHA-RKYFAAGLPG 139 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~-~~~f~~gvp~ 139 (367)
.+..+|+|+|||+|..+..+.+. -.+++--|....-....-+.+... +-.|..+.
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~----------------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d-- 105 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPH----------------------CKRLTVIDVMPRAIGRACQRTKRWSHISWAATD-- 105 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGG----------------------EEEEEEEESCHHHHHHHHHHTTTCSSEEEEECC--
T ss_pred CCCCcEEEEcCCCCHHHHHHHHc----------------------CCEEEEEECCHHHHHHHHHhcccCCCeEEEEcc--
Confidence 45689999999999988876521 125666676543222222222221 22244443
Q ss_pred cccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 140 SFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
+ ..+.|++++|+++++.++||+.+. .++..+|+.-++-|+|||
T Consensus 106 -~-~~~~~~~~fD~v~~~~~l~~~~~~-----------------------------------~~~~~~l~~~~~~L~pgG 148 (216)
T 3ofk_A 106 -I-LQFSTAELFDLIVVAEVLYYLEDM-----------------------------------TQMRTAIDNMVKMLAPGG 148 (216)
T ss_dssp -T-TTCCCSCCEEEEEEESCGGGSSSH-----------------------------------HHHHHHHHHHHHTEEEEE
T ss_pred -h-hhCCCCCCccEEEEccHHHhCCCH-----------------------------------HHHHHHHHHHHHHcCCCC
Confidence 2 233378999999999999997642 145578999999999999
Q ss_pred eEEEEeec
Q 017702 220 LMVLILAA 227 (367)
Q Consensus 220 ~lvl~~~g 227 (367)
++++....
T Consensus 149 ~l~~~~~~ 156 (216)
T 3ofk_A 149 HLVFGSAR 156 (216)
T ss_dssp EEEEEEEC
T ss_pred EEEEEecC
Confidence 99998875
|
| >3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=98.67 E-value=2.6e-07 Score=83.30 Aligned_cols=103 Identities=17% Similarity=0.210 Sum_probs=65.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCccc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSF 141 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SF 141 (367)
+..+|+|+|||+|..+..+.+.. + +++.-|+...-....-+.++ +--|..+. +
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~-----------------~-----~v~~~D~s~~~~~~a~~~~~--~~~~~~~d---~ 92 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEF-----------------G-----DTAGLELSEDMLTHARKRLP--DATLHQGD---M 92 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHH-----------------S-----EEEEEESCHHHHHHHHHHCT--TCEEEECC---T
T ss_pred CCCeEEEecccCCHHHHHHHHhC-----------------C-----cEEEEeCCHHHHHHHHHhCC--CCEEEECC---H
Confidence 34799999999999998776432 1 35555654322111111111 11233332 2
Q ss_pred cccCCCCCceeEEEe-ccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCce
Q 017702 142 HSRLFPRSSIHFVHT-SYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGL 220 (367)
Q Consensus 142 y~~l~P~~svd~~~S-~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~ 220 (367)
.+ +.+++++|+++| ..++||+... .|+..+|+.-++-|+|||+
T Consensus 93 ~~-~~~~~~~D~v~~~~~~~~~~~~~-----------------------------------~~~~~~l~~~~~~L~pgG~ 136 (239)
T 3bxo_A 93 RD-FRLGRKFSAVVSMFSSVGYLKTT-----------------------------------EELGAAVASFAEHLEPGGV 136 (239)
T ss_dssp TT-CCCSSCEEEEEECTTGGGGCCSH-----------------------------------HHHHHHHHHHHHTEEEEEE
T ss_pred HH-cccCCCCcEEEEcCchHhhcCCH-----------------------------------HHHHHHHHHHHHhcCCCeE
Confidence 22 223679999995 4599996431 2666799999999999999
Q ss_pred EEEEeec
Q 017702 221 MVLILAA 227 (367)
Q Consensus 221 lvl~~~g 227 (367)
+++....
T Consensus 137 l~~~~~~ 143 (239)
T 3bxo_A 137 VVVEPWW 143 (239)
T ss_dssp EEECCCC
T ss_pred EEEEecc
Confidence 9998765
|
| >1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A* | Back alignment and structure |
|---|
Probab=98.64 E-value=4.8e-07 Score=88.28 Aligned_cols=152 Identities=16% Similarity=0.154 Sum_probs=92.4
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCcc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGS 140 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~S 140 (367)
++..+|+|+|||+|..+..+.+.. | .++++.-|+|. .......... +.-+.++
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~-----------------~---~~~~~~~D~~~-----~~~~a~~~~~--v~~~~~d 260 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKY-----------------P---LIKGINFDLPQ-----VIENAPPLSG--IEHVGGD 260 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHC-----------------T---TCEEEEEECHH-----HHTTCCCCTT--EEEEECC
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHC-----------------C---CCeEEEeChHH-----HHHhhhhcCC--CEEEeCC
Confidence 345799999999999988776322 3 45677778842 1111111111 2334456
Q ss_pred ccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCce
Q 017702 141 FHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGL 220 (367)
Q Consensus 141 Fy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~ 220 (367)
|.+ -+|. +|+++++.++|++++ .+...+|+.-++-|+|||+
T Consensus 261 ~~~-~~~~--~D~v~~~~~lh~~~d------------------------------------~~~~~~l~~~~~~L~pgG~ 301 (372)
T 1fp1_D 261 MFA-SVPQ--GDAMILKAVCHNWSD------------------------------------EKCIEFLSNCHKALSPNGK 301 (372)
T ss_dssp TTT-CCCC--EEEEEEESSGGGSCH------------------------------------HHHHHHHHHHHHHEEEEEE
T ss_pred ccc-CCCC--CCEEEEecccccCCH------------------------------------HHHHHHHHHHHHhcCCCCE
Confidence 766 4564 899999999997542 1334689999999999999
Q ss_pred EEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHH-HcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEE
Q 017702 221 MVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLA-KMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKL 298 (367)
Q Consensus 221 lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~-~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~ 298 (367)
+++.-.. .++... ......+..+.+.+ -|+ ..| ..++.+|+++++++.| |++.++...
T Consensus 302 l~i~e~~-~~~~~~---~~~~~~~~~~~d~~-~~~~~~~--------------~~~t~~e~~~ll~~aG-f~~~~~~~~ 360 (372)
T 1fp1_D 302 VIIVEFI-LPEEPN---TSEESKLVSTLDNL-MFITVGG--------------RERTEKQYEKLSKLSG-FSKFQVACR 360 (372)
T ss_dssp EEEEEEE-ECSSCC---SSHHHHHHHHHHHH-HHHHHSC--------------CCEEHHHHHHHHHHTT-CSEEEEEEE
T ss_pred EEEEEec-cCCCCc---cchHHHHHHHhhHH-HHhccCC--------------ccCCHHHHHHHHHHCC-CceEEEEEc
Confidence 9988654 333211 00000001111111 111 112 2469999999999997 988776553
|
| >1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A* | Back alignment and structure |
|---|
Probab=98.64 E-value=2.1e-07 Score=90.36 Aligned_cols=154 Identities=19% Similarity=0.209 Sum_probs=90.9
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC---Cc-cccceeec
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL---PH-ARKYFAAG 136 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l---~~-~~~~f~~g 136 (367)
.+..+|+|+|||+|..+..+.+.. | ..+++.-|+| .-....-+.+ .. .+-.|..
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~-----------------~---~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~- 238 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRA-----------------P---HLRGTLVELA-GPAERARRRFADAGLADRVTVAE- 238 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHC-----------------T---TCEEEEEECH-HHHHHHHHHHHHTTCTTTEEEEE-
T ss_pred CCCCEEEEECCCcCHHHHHHHHHC-----------------C---CCEEEEEeCH-HHHHHHHHHHHhcCCCCceEEEe-
Confidence 346899999999998887765321 2 3467888883 2211111111 11 1222333
Q ss_pred cCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhc
Q 017702 137 LPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELV 216 (367)
Q Consensus 137 vp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~ 216 (367)
++|.+ -+|. .+|+++++.++|++++ .+...+|+...+-|+
T Consensus 239 --~d~~~-~~~~-~~D~v~~~~vl~~~~~------------------------------------~~~~~~l~~~~~~L~ 278 (374)
T 1qzz_A 239 --GDFFK-PLPV-TADVVLLSFVLLNWSD------------------------------------EDALTILRGCVRALE 278 (374)
T ss_dssp --CCTTS-CCSC-CEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHEE
T ss_pred --CCCCC-cCCC-CCCEEEEeccccCCCH------------------------------------HHHHHHHHHHHHhcC
Confidence 44555 3454 4999999999987431 133468888899999
Q ss_pred cCceEEEEee--cccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeE
Q 017702 217 PGGLMVLILA--AVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEK 294 (367)
Q Consensus 217 pGG~lvl~~~--g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~ 294 (367)
|||++++.-. . .++.. ...+..+.+.+. ++..| ...++.+|+++++++.| |++.+
T Consensus 279 pgG~l~i~e~~~~-~~~~~-------~~~~~~~~~~~~-~~~~~-------------~~~~~~~~~~~ll~~aG-f~~~~ 335 (374)
T 1qzz_A 279 PGGRLLVLDRADV-EGDGA-------DRFFSTLLDLRM-LTFMG-------------GRVRTRDEVVDLAGSAG-LALAS 335 (374)
T ss_dssp EEEEEEEEECCH---------------HHHHHHHHHHH-HHHHS-------------CCCCCHHHHHHHHHTTT-EEEEE
T ss_pred CCcEEEEEechhh-cCCCC-------CcchhhhcchHH-HHhCC-------------CcCCCHHHHHHHHHHCC-CceEE
Confidence 9999998766 3 22211 011121111111 11111 13689999999999997 99988
Q ss_pred EEEEe
Q 017702 295 MEKLS 299 (367)
Q Consensus 295 lE~~~ 299 (367)
+....
T Consensus 336 ~~~~~ 340 (374)
T 1qzz_A 336 ERTSG 340 (374)
T ss_dssp EEEEC
T ss_pred EEECC
Confidence 77653
|
| >2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A | Back alignment and structure |
|---|
Probab=98.63 E-value=5.6e-07 Score=77.90 Aligned_cols=138 Identities=16% Similarity=0.121 Sum_probs=85.8
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCcc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGS 140 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~S 140 (367)
...-+|+|+|||... +-+-...++..+++... .+++..-|...-+
T Consensus 11 ~~g~~vL~~~~g~v~--vD~s~~ml~~a~~~~~~-----------~~~~~~~d~~~~~---------------------- 55 (176)
T 2ld4_A 11 SAGQFVAVVWDKSSP--VEALKGLVDKLQALTGN-----------EGRVSVENIKQLL---------------------- 55 (176)
T ss_dssp CTTSEEEEEECTTSC--HHHHHHHHHHHHHHTTT-----------TSEEEEEEGGGGG----------------------
T ss_pred CCCCEEEEecCCcee--eeCCHHHHHHHHHhccc-----------CcEEEEechhcCc----------------------
Confidence 345799999999754 44445555555544221 2344444432100
Q ss_pred ccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCce
Q 017702 141 FHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGL 220 (367)
Q Consensus 141 Fy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~ 220 (367)
| .-+|++++|+++|+.++||+. + |+..+|+.-++-|||||+
T Consensus 56 ~--~~~~~~~fD~V~~~~~l~~~~--~-----------------------------------~~~~~l~~~~r~LkpgG~ 96 (176)
T 2ld4_A 56 Q--SAHKESSFDIILSGLVPGSTT--L-----------------------------------HSAEILAEIARILRPGGC 96 (176)
T ss_dssp G--GCCCSSCEEEEEECCSTTCCC--C-----------------------------------CCHHHHHHHHHHEEEEEE
T ss_pred c--ccCCCCCEeEEEECChhhhcc--c-----------------------------------CHHHHHHHHHHHCCCCEE
Confidence 0 013678999999999999972 1 223588999999999999
Q ss_pred EEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEEec
Q 017702 221 MVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLSQ 300 (367)
Q Consensus 221 lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~~~ 300 (367)
|++..+. .... + .+.|.++.+++.+.+++.| | |+ ++....
T Consensus 97 l~~~~~~-~~~~-------------------------~-----------~~~~~~~~~~~~~~l~~aG-f-i~-~~~~~~ 136 (176)
T 2ld4_A 97 LFLKEPV-ETAV-------------------------D-----------NNSKVKTASKLCSALTLSG-L-VE-VKELQR 136 (176)
T ss_dssp EEEEEEE-ESSS-------------------------C-----------SSSSSCCHHHHHHHHHHTT-C-EE-EEEEEE
T ss_pred EEEEccc-cccc-------------------------c-----------cccccCCHHHHHHHHHHCC-C-cE-eecCcc
Confidence 9996543 1110 0 0556788999999999997 8 76 444322
Q ss_pred CCCCCCHHHHHHhH
Q 017702 301 PRRRITANEYASGI 314 (367)
Q Consensus 301 p~~~~~~~~v~~~i 314 (367)
. +.+++.+..|.
T Consensus 137 ~--~~~~~~~~~~~ 148 (176)
T 2ld4_A 137 E--PLTPEEVQSVR 148 (176)
T ss_dssp E--CCCHHHHHHHH
T ss_pred c--CCCHHHHHHHH
Confidence 1 33455555443
|
| >3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A | Back alignment and structure |
|---|
Probab=98.62 E-value=1.7e-07 Score=83.89 Aligned_cols=106 Identities=20% Similarity=0.115 Sum_probs=67.7
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCcc--------ccce
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHA--------RKYF 133 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~--------~~~f 133 (367)
+..+|+|+|||+|..+..+.+. .| ..+++--|+...-....-+.+... +--|
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~-----------------~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~ 88 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSLLLKD-----------------KS---FEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISL 88 (219)
T ss_dssp TCCEEEEETCTTCHHHHHHHTS-----------------TT---CCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEE
T ss_pred CCCEEEEecCCCCHHHHHHHhc-----------------CC---CCEEEEEECCHHHHHHHHHHHHhhccccccCcceEE
Confidence 3469999999999988877521 12 246777787643322222222110 1223
Q ss_pred eeccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHH
Q 017702 134 AAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAE 213 (367)
Q Consensus 134 ~~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~ 213 (367)
..+. +....++++++|+|+++.++||+.. .++..+|+.-++
T Consensus 89 ~~~d---~~~~~~~~~~fD~V~~~~~l~~~~~------------------------------------~~~~~~l~~~~~ 129 (219)
T 3jwg_A 89 FQSS---LVYRDKRFSGYDAATVIEVIEHLDE------------------------------------NRLQAFEKVLFE 129 (219)
T ss_dssp EECC---SSSCCGGGTTCSEEEEESCGGGCCH------------------------------------HHHHHHHHHHHT
T ss_pred EeCc---ccccccccCCCCEEEEHHHHHhCCH------------------------------------HHHHHHHHHHHH
Confidence 3333 3333446689999999999999742 145679999999
Q ss_pred hhccCceEEEEee
Q 017702 214 ELVPGGLMVLILA 226 (367)
Q Consensus 214 EL~pGG~lvl~~~ 226 (367)
-|+|||.++.+..
T Consensus 130 ~LkpgG~~i~~~~ 142 (219)
T 3jwg_A 130 FTRPQTVIVSTPN 142 (219)
T ss_dssp TTCCSEEEEEEEB
T ss_pred hhCCCEEEEEccc
Confidence 9999996655443
|
| >3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=98.59 E-value=1.7e-07 Score=85.29 Aligned_cols=161 Identities=17% Similarity=0.043 Sum_probs=87.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCccc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSF 141 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SF 141 (367)
...+|+|+|||+|.++..+.+.. + +|+--|....-....-+..+..+--|..+.-..+
T Consensus 56 ~~~~vLD~GcG~G~~~~~la~~~-----------------~-----~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~ 113 (245)
T 3ggd_A 56 PELPLIDFACGNGTQTKFLSQFF-----------------P-----RVIGLDVSKSALEIAAKENTAANISYRLLDGLVP 113 (245)
T ss_dssp TTSCEEEETCTTSHHHHHHHHHS-----------------S-----CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCH
T ss_pred CCCeEEEEcCCCCHHHHHHHHhC-----------------C-----CEEEEECCHHHHHHHHHhCcccCceEEECccccc
Confidence 45789999999999999887421 1 2344444322211111112111112222221110
Q ss_pred c--ccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 142 H--SRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 142 y--~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
- ..+-...++|+++++.++||+.. .|...+|+.-.+-|+|||
T Consensus 114 ~~~~~~~~~~~~d~v~~~~~~~~~~~------------------------------------~~~~~~l~~~~~~LkpgG 157 (245)
T 3ggd_A 114 EQAAQIHSEIGDANIYMRTGFHHIPV------------------------------------EKRELLGQSLRILLGKQG 157 (245)
T ss_dssp HHHHHHHHHHCSCEEEEESSSTTSCG------------------------------------GGHHHHHHHHHHHHTTTC
T ss_pred ccccccccccCccEEEEcchhhcCCH------------------------------------HHHHHHHHHHHHHcCCCC
Confidence 0 00001134899999999999642 255678999999999999
Q ss_pred eEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhh---hhccCCCcccCCHHHHHHHHHhCCceEEeEEE
Q 017702 220 LMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEK---VDSFNLPTYNATPKELEAIIRTNGNFTIEKME 296 (367)
Q Consensus 220 ~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~---~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE 296 (367)
++++.-++ .++. .++..+... ..| ..... +..-..| ...+.+|+.+.+ .| |++..-.
T Consensus 158 ~l~i~~~~-~~~~---------~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~--aG-f~~~~~~ 217 (245)
T 3ggd_A 158 AMYLIELG-TGCI---------DFFNSLLEK-----YGQ-LPYELLLVMEHGIRP-GIFTAEDIELYF--PD-FEILSQG 217 (245)
T ss_dssp EEEEEEEC-TTHH---------HHHHHHHHH-----HSS-CCHHHHHHHTTTCCC-CCCCHHHHHHHC--TT-EEEEEEE
T ss_pred EEEEEeCC-cccc---------HHHHHHHhC-----CCC-CchhhhhccccCCCC-CccCHHHHHHHh--CC-CEEEecc
Confidence 99888877 3321 111111110 011 11110 1111223 346899999998 65 9998776
Q ss_pred EEec
Q 017702 297 KLSQ 300 (367)
Q Consensus 297 ~~~~ 300 (367)
....
T Consensus 218 ~~~~ 221 (245)
T 3ggd_A 218 EGLF 221 (245)
T ss_dssp CCBC
T ss_pred cccc
Confidence 6543
|
| >3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=98.58 E-value=3.3e-07 Score=79.53 Aligned_cols=128 Identities=15% Similarity=0.194 Sum_probs=83.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCccc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSF 141 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SF 141 (367)
...+|+|+|||+|..+..+... ..+++..|....-....-+.++. --+..+ ++
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~----------------------~~~v~~~D~~~~~~~~a~~~~~~--~~~~~~---d~ 98 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQ----------------------GHDVLGTDLDPILIDYAKQDFPE--ARWVVG---DL 98 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHT----------------------TCEEEEEESCHHHHHHHHHHCTT--SEEEEC---CT
T ss_pred CCCeEEEECCCCCHHHHHHHHC----------------------CCcEEEEcCCHHHHHHHHHhCCC--CcEEEc---cc
Confidence 3469999999999988876521 11466666643222222222211 122222 23
Q ss_pred cccCCCCCceeEEEec-cccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCce
Q 017702 142 HSRLFPRSSIHFVHTS-YALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGL 220 (367)
Q Consensus 142 y~~l~P~~svd~~~S~-~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~ 220 (367)
.+-.+|++++|+++++ ..+|+++. .+...+|+.-.+-|+|||+
T Consensus 99 ~~~~~~~~~~D~i~~~~~~~~~~~~------------------------------------~~~~~~l~~~~~~l~~~G~ 142 (195)
T 3cgg_A 99 SVDQISETDFDLIVSAGNVMGFLAE------------------------------------DGREPALANIHRALGADGR 142 (195)
T ss_dssp TTSCCCCCCEEEEEECCCCGGGSCH------------------------------------HHHHHHHHHHHHHEEEEEE
T ss_pred ccCCCCCCceeEEEECCcHHhhcCh------------------------------------HHHHHHHHHHHHHhCCCCE
Confidence 3333577899999998 67887531 1456788888999999999
Q ss_pred EEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEE
Q 017702 221 MVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEK 297 (367)
Q Consensus 221 lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~ 297 (367)
+++.... .. ..+.+++.+.+++.| |++.+...
T Consensus 143 l~~~~~~-~~-------------------------------------------~~~~~~~~~~l~~~G-f~~~~~~~ 174 (195)
T 3cgg_A 143 AVIGFGA-GR-------------------------------------------GWVFGDFLEVAERVG-LELENAFE 174 (195)
T ss_dssp EEEEEET-TS-------------------------------------------SCCHHHHHHHHHHHT-EEEEEEES
T ss_pred EEEEeCC-CC-------------------------------------------CcCHHHHHHHHHHcC-CEEeeeec
Confidence 9998765 11 145778888888886 88876643
|
| >1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43 | Back alignment and structure |
|---|
Probab=98.58 E-value=5.2e-07 Score=80.68 Aligned_cols=104 Identities=16% Similarity=0.201 Sum_probs=64.1
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC--ccccceeeccCcc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP--HARKYFAAGLPGS 140 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~--~~~~~f~~gvp~S 140 (367)
..+|+|+|||+|..+..+... .+ +++..|+...-....-+... ..+--|..+.
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~-----------------~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d--- 93 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDY-----------------GF-----EVVGVDISEDMIRKAREYAKSRESNVEFIVGD--- 93 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHT-----------------TC-----EEEEEESCHHHHHHHHHHHHHTTCCCEEEECC---
T ss_pred CCeEEEEeccCCHHHHHHHHc-----------------CC-----EEEEEECCHHHHHHHHHHHHhcCCCceEEECc---
Confidence 579999999999988766521 12 45666664321111111110 0111233332
Q ss_pred ccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCce
Q 017702 141 FHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGL 220 (367)
Q Consensus 141 Fy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~ 220 (367)
+.+--+|++++|+++++.++|+... .|...+|+.-++-|+|||+
T Consensus 94 ~~~~~~~~~~~D~v~~~~~~~~~~~------------------------------------~~~~~~l~~~~~~L~~gG~ 137 (227)
T 1ve3_A 94 ARKLSFEDKTFDYVIFIDSIVHFEP------------------------------------LELNQVFKEVRRVLKPSGK 137 (227)
T ss_dssp TTSCCSCTTCEEEEEEESCGGGCCH------------------------------------HHHHHHHHHHHHHEEEEEE
T ss_pred hhcCCCCCCcEEEEEEcCchHhCCH------------------------------------HHHHHHHHHHHHHcCCCcE
Confidence 3332357789999999998554220 2456789999999999999
Q ss_pred EEEEeec
Q 017702 221 MVLILAA 227 (367)
Q Consensus 221 lvl~~~g 227 (367)
+++..+.
T Consensus 138 l~~~~~~ 144 (227)
T 1ve3_A 138 FIMYFTD 144 (227)
T ss_dssp EEEEEEC
T ss_pred EEEEecC
Confidence 9998875
|
| >3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A | Back alignment and structure |
|---|
Probab=98.58 E-value=2.6e-07 Score=82.69 Aligned_cols=105 Identities=15% Similarity=0.084 Sum_probs=66.9
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCcc--------cccee
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHA--------RKYFA 134 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~--------~~~f~ 134 (367)
..+|+|+|||+|..+..+.+. .+ ..+++--|+...-....-+.+... +--|.
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~-----------------~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~ 89 (217)
T 3jwh_A 30 ARRVIDLGCGQGNLLKILLKD-----------------SF---FEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLI 89 (217)
T ss_dssp CCEEEEETCTTCHHHHHHHHC-----------------TT---CSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEE
T ss_pred CCEEEEeCCCCCHHHHHHHhh-----------------CC---CCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEE
Confidence 469999999999998877521 11 236777777643322222222110 12233
Q ss_pred eccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHh
Q 017702 135 AGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEE 214 (367)
Q Consensus 135 ~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~E 214 (367)
.+. +...-.+.+++|+++++.++||+.+ .++..+|+..++-
T Consensus 90 ~~d---~~~~~~~~~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~ 130 (217)
T 3jwh_A 90 QGA---LTYQDKRFHGYDAATVIEVIEHLDL------------------------------------SRLGAFERVLFEF 130 (217)
T ss_dssp ECC---TTSCCGGGCSCSEEEEESCGGGCCH------------------------------------HHHHHHHHHHHTT
T ss_pred eCC---cccccccCCCcCEEeeHHHHHcCCH------------------------------------HHHHHHHHHHHHH
Confidence 332 2223345589999999999999742 1556789999999
Q ss_pred hccCceEEEEee
Q 017702 215 LVPGGLMVLILA 226 (367)
Q Consensus 215 L~pGG~lvl~~~ 226 (367)
|+|||+++++..
T Consensus 131 LkpgG~li~~~~ 142 (217)
T 3jwh_A 131 AQPKIVIVTTPN 142 (217)
T ss_dssp TCCSEEEEEEEB
T ss_pred cCCCEEEEEccC
Confidence 999996665543
|
| >2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=1.5e-07 Score=82.32 Aligned_cols=137 Identities=18% Similarity=0.227 Sum_probs=83.0
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC---ccccceeeccCc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP---HARKYFAAGLPG 139 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~---~~~~~f~~gvp~ 139 (367)
..+|+|+|||+|..+..+.+. ..+++..|....-....-+... ..+--|..+
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~----------------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~--- 87 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLAAN----------------------GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVV--- 87 (199)
T ss_dssp SCEEEEETCTTSHHHHHHHHT----------------------TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEEC---
T ss_pred CCeEEEEcCCCCHHHHHHHHC----------------------CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEc---
Confidence 469999999999998877521 1245666654322111111110 001122222
Q ss_pred cccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 140 SFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
.+.+-.+ ++++|+++++.++||++. .|+..+|+.-.+-|+|||
T Consensus 88 d~~~~~~-~~~~D~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~L~~gG 130 (199)
T 2xvm_A 88 DLNNLTF-DRQYDFILSTVVLMFLEA------------------------------------KTIPGLIANMQRCTKPGG 130 (199)
T ss_dssp CGGGCCC-CCCEEEEEEESCGGGSCG------------------------------------GGHHHHHHHHHHTEEEEE
T ss_pred chhhCCC-CCCceEEEEcchhhhCCH------------------------------------HHHHHHHHHHHHhcCCCe
Confidence 2232223 789999999999999651 145678999999999999
Q ss_pred eEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEE
Q 017702 220 LMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEK 297 (367)
Q Consensus 220 ~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~ 297 (367)
++++.... ..+..+ .+ ....+..+.+|++++++. |++.+.+.
T Consensus 131 ~l~~~~~~-~~~~~~----------------------~~----------~~~~~~~~~~~l~~~~~~---f~~~~~~~ 172 (199)
T 2xvm_A 131 YNLIVAAM-DTADYP----------------------CT----------VGFPFAFKEGELRRYYEG---WERVKYNE 172 (199)
T ss_dssp EEEEEEEB-CCSSSC----------------------CC----------SCCSCCBCTTHHHHHTTT---SEEEEEEC
T ss_pred EEEEEEee-ccCCcC----------------------CC----------CCCCCccCHHHHHHHhcC---CeEEEecc
Confidence 98876654 222110 00 011235688999999864 99988764
|
| >2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.58 E-value=5.8e-07 Score=79.78 Aligned_cols=99 Identities=18% Similarity=0.166 Sum_probs=65.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCccc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSF 141 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SF 141 (367)
+..+|+|+|||+|..+..+ . .+ +++..|....-....-+.. .+-.+..+. +
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-------------~------~~-----~v~~vD~s~~~~~~a~~~~--~~~~~~~~d---~ 86 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-------------P------YP-----QKVGVEPSEAMLAVGRRRA--PEATWVRAW---G 86 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-------------C------CS-----EEEEECCCHHHHHHHHHHC--TTSEEECCC---T
T ss_pred CCCeEEEECCCCCHhHHhC-------------C------CC-----eEEEEeCCHHHHHHHHHhC--CCcEEEEcc---c
Confidence 4579999999999877654 0 11 4666676543222221212 111233332 2
Q ss_pred cccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceE
Q 017702 142 HSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLM 221 (367)
Q Consensus 142 y~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~l 221 (367)
.+--+|++++|+++++.++||+. |...+|+.-.+-|+|||++
T Consensus 87 ~~~~~~~~~fD~v~~~~~l~~~~--------------------------------------~~~~~l~~~~~~L~pgG~l 128 (211)
T 2gs9_A 87 EALPFPGESFDVVLLFTTLEFVE--------------------------------------DVERVLLEARRVLRPGGAL 128 (211)
T ss_dssp TSCCSCSSCEEEEEEESCTTTCS--------------------------------------CHHHHHHHHHHHEEEEEEE
T ss_pred ccCCCCCCcEEEEEEcChhhhcC--------------------------------------CHHHHHHHHHHHcCCCCEE
Confidence 33335788999999999999965 2235888888999999999
Q ss_pred EEEeec
Q 017702 222 VLILAA 227 (367)
Q Consensus 222 vl~~~g 227 (367)
++..+.
T Consensus 129 ~i~~~~ 134 (211)
T 2gs9_A 129 VVGVLE 134 (211)
T ss_dssp EEEEEC
T ss_pred EEEecC
Confidence 999987
|
| >3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15} | Back alignment and structure |
|---|
Probab=98.57 E-value=1.2e-06 Score=79.08 Aligned_cols=103 Identities=20% Similarity=0.290 Sum_probs=62.7
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC--ccccceeeccCcc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP--HARKYFAAGLPGS 140 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~--~~~~~f~~gvp~S 140 (367)
..+|+|+|||+|..+..+.+. .+++.-|+...-....-+... ..+--|..+.
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~~-----------------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d--- 87 (243)
T 3d2l_A 34 GKRIADIGCGTGTATLLLADH-----------------------YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQD--- 87 (243)
T ss_dssp TCEEEEESCTTCHHHHHHTTT-----------------------SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECC---
T ss_pred CCeEEEecCCCCHHHHHHhhC-----------------------CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcC---
Confidence 379999999999988876521 134444553221111111110 0111222222
Q ss_pred ccccCCCCCceeEEEecc-ccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 141 FHSRLFPRSSIHFVHTSY-ALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 141 Fy~~l~P~~svd~~~S~~-alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
+.+ +.+++++|++++.. ++||+... .|...+|+.-++-|+|||
T Consensus 88 ~~~-~~~~~~fD~v~~~~~~~~~~~~~-----------------------------------~~~~~~l~~~~~~L~pgG 131 (243)
T 3d2l_A 88 MRE-LELPEPVDAITILCDSLNYLQTE-----------------------------------ADVKQTFDSAARLLTDGG 131 (243)
T ss_dssp GGG-CCCSSCEEEEEECTTGGGGCCSH-----------------------------------HHHHHHHHHHHHHEEEEE
T ss_pred hhh-cCCCCCcCEEEEeCCchhhcCCH-----------------------------------HHHHHHHHHHHHhcCCCe
Confidence 222 22338999999987 99996421 256678999999999999
Q ss_pred eEEEEeec
Q 017702 220 LMVLILAA 227 (367)
Q Consensus 220 ~lvl~~~g 227 (367)
++++.+..
T Consensus 132 ~l~~~~~~ 139 (243)
T 3d2l_A 132 KLLFDVHS 139 (243)
T ss_dssp EEEEEEEC
T ss_pred EEEEEcCC
Confidence 99998765
|
| >1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=8.2e-07 Score=86.07 Aligned_cols=153 Identities=12% Similarity=0.094 Sum_probs=93.8
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC---C-ccccceeec
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL---P-HARKYFAAG 136 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l---~-~~~~~f~~g 136 (367)
.+..+|+|+|||+|..+..+.+.. | ..+++.-|+|. -....-+.+ . ..+--|.
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~-----------------p---~~~~~~~D~~~-~~~~a~~~~~~~~~~~~v~~~-- 245 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHF-----------------P---ELDSTILNLPG-AIDLVNENAAEKGVADRMRGI-- 245 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHC-----------------T---TCEEEEEECGG-GHHHHHHHHHHTTCTTTEEEE--
T ss_pred CCCCEEEEECCcccHHHHHHHHHC-----------------C---CCeEEEEecHH-HHHHHHHHHHhcCCCCCEEEE--
Confidence 346799999999999988776321 2 34678889842 211111111 1 1112233
Q ss_pred cCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhc
Q 017702 137 LPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELV 216 (367)
Q Consensus 137 vp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~ 216 (367)
.++|.+..+|+. |+++++.++|.+++ .+...+|+.-++-|+
T Consensus 246 -~~d~~~~~~~~~--D~v~~~~vlh~~~d------------------------------------~~~~~~l~~~~~~L~ 286 (359)
T 1x19_A 246 -AVDIYKESYPEA--DAVLFCRILYSANE------------------------------------QLSTIMCKKAFDAMR 286 (359)
T ss_dssp -ECCTTTSCCCCC--SEEEEESCGGGSCH------------------------------------HHHHHHHHHHHTTCC
T ss_pred -eCccccCCCCCC--CEEEEechhccCCH------------------------------------HHHHHHHHHHHHhcC
Confidence 345665545544 99999999985321 245679999999999
Q ss_pred cCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHH---HcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEe
Q 017702 217 PGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLA---KMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIE 293 (367)
Q Consensus 217 pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~---~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~ 293 (367)
|||++++.-.. .++.. . ..+..+. .|. ..| .....+++.+|+++++++.| |++.
T Consensus 287 pgG~l~i~e~~-~~~~~---~----~~~~~~~----~~~~~~~~g----------~~~~~~~t~~e~~~ll~~aG-f~~v 343 (359)
T 1x19_A 287 SGGRLLILDMV-IDDPE---N----PNFDYLS----HYILGAGMP----------FSVLGFKEQARYKEILESLG-YKDV 343 (359)
T ss_dssp TTCEEEEEEEC-CCCTT---S----CCHHHHH----HHGGGGGSS----------CCCCCCCCGGGHHHHHHHHT-CEEE
T ss_pred CCCEEEEEecc-cCCCC---C----chHHHHH----HHHHhcCCC----------CcccCCCCHHHHHHHHHHCC-CceE
Confidence 99999777665 43321 0 1112111 221 112 11223589999999999997 9988
Q ss_pred EEEEE
Q 017702 294 KMEKL 298 (367)
Q Consensus 294 ~lE~~ 298 (367)
+....
T Consensus 344 ~~~~~ 348 (359)
T 1x19_A 344 TMVRK 348 (359)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 77654
|
| >2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.54 E-value=2.1e-07 Score=82.99 Aligned_cols=111 Identities=16% Similarity=0.194 Sum_probs=77.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCccc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSF 141 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SF 141 (367)
...+|+|+|||+|..+..+. .+++.-|+... +.-|..+ .+
T Consensus 67 ~~~~vLDiG~G~G~~~~~l~-------------------------~~v~~~D~s~~------------~~~~~~~---d~ 106 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSIR-------------------------NPVHCFDLASL------------DPRVTVC---DM 106 (215)
T ss_dssp TTSCEEEETCTTCHHHHHCC-------------------------SCEEEEESSCS------------STTEEES---CT
T ss_pred CCCeEEEECCcCCHHHHHhh-------------------------ccEEEEeCCCC------------CceEEEe---cc
Confidence 45799999999999876541 02455566543 1112222 22
Q ss_pred cccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceE
Q 017702 142 HSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLM 221 (367)
Q Consensus 142 y~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~l 221 (367)
.+--+|++++|+++++.++|| . |...+|+.-++-|+|||++
T Consensus 107 ~~~~~~~~~fD~v~~~~~l~~-~--------------------------------------~~~~~l~~~~~~L~~gG~l 147 (215)
T 2zfu_A 107 AQVPLEDESVDVAVFCLSLMG-T--------------------------------------NIRDFLEEANRVLKPGGLL 147 (215)
T ss_dssp TSCSCCTTCEEEEEEESCCCS-S--------------------------------------CHHHHHHHHHHHEEEEEEE
T ss_pred ccCCCCCCCEeEEEEehhccc-c--------------------------------------CHHHHHHHHHHhCCCCeEE
Confidence 333367889999999999996 1 3345888888999999999
Q ss_pred EEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEE
Q 017702 222 VLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKME 296 (367)
Q Consensus 222 vl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE 296 (367)
++..+. .. +++.+++.+++++.| |++....
T Consensus 148 ~i~~~~-~~-------------------------------------------~~~~~~~~~~l~~~G-f~~~~~~ 177 (215)
T 2zfu_A 148 KVAEVS-SR-------------------------------------------FEDVRTFLRAVTKLG-FKIVSKD 177 (215)
T ss_dssp EEEECG-GG-------------------------------------------CSCHHHHHHHHHHTT-EEEEEEE
T ss_pred EEEEcC-CC-------------------------------------------CCCHHHHHHHHHHCC-CEEEEEe
Confidence 998654 10 237899999999997 9887754
|
| >3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi} | Back alignment and structure |
|---|
Probab=98.53 E-value=9.7e-07 Score=76.56 Aligned_cols=102 Identities=15% Similarity=0.080 Sum_probs=64.1
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCcccc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSFH 142 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SFy 142 (367)
..+|+|+|||+|..++.+.+ . - +|+--|+...-... ..+--|..+. +.
T Consensus 24 ~~~vLD~GcG~G~~~~~l~~-------------------~---~-~v~gvD~s~~~~~~------~~~~~~~~~d---~~ 71 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLRK-------------------R---N-TVVSTDLNIRALES------HRGGNLVRAD---LL 71 (170)
T ss_dssp SCEEEEETCTTCHHHHHHTT-------------------T---S-EEEEEESCHHHHHT------CSSSCEEECS---TT
T ss_pred CCeEEEeccCccHHHHHHHh-------------------c---C-cEEEEECCHHHHhc------ccCCeEEECC---hh
Confidence 35999999999999887751 1 2 56666664322111 1122244443 33
Q ss_pred ccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEE
Q 017702 143 SRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMV 222 (367)
Q Consensus 143 ~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lv 222 (367)
+ .++++++|+++|+..+||.+..+... .| .|...+++.-.+.| |||+++
T Consensus 72 ~-~~~~~~fD~i~~n~~~~~~~~~~~~~---------~~--------------------~~~~~~~~~~~~~l-pgG~l~ 120 (170)
T 3q87_B 72 C-SINQESVDVVVFNPPYVPDTDDPIIG---------GG--------------------YLGREVIDRFVDAV-TVGMLY 120 (170)
T ss_dssp T-TBCGGGCSEEEECCCCBTTCCCTTTB---------CC--------------------GGGCHHHHHHHHHC-CSSEEE
T ss_pred h-hcccCCCCEEEECCCCccCCcccccc---------CC--------------------cchHHHHHHHHhhC-CCCEEE
Confidence 3 45668999999999999977653200 00 12223566666677 999999
Q ss_pred EEeec
Q 017702 223 LILAA 227 (367)
Q Consensus 223 l~~~g 227 (367)
+...+
T Consensus 121 ~~~~~ 125 (170)
T 3q87_B 121 LLVIE 125 (170)
T ss_dssp EEEEG
T ss_pred EEEec
Confidence 98876
|
| >1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A* | Back alignment and structure |
|---|
Probab=98.52 E-value=8.5e-07 Score=85.73 Aligned_cols=154 Identities=18% Similarity=0.213 Sum_probs=91.6
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC---Cc-cccceeec
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL---PH-ARKYFAAG 136 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l---~~-~~~~f~~g 136 (367)
.+..+|+|+|||+|..+..+.+. .| .++++.-|+| .-....-+.+ .. .+-.|..
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~-----------------~~---~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~- 239 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARR-----------------AP---HVSATVLEMA-GTVDTARSYLKDEGLSDRVDVVE- 239 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHH-----------------CT---TCEEEEEECT-THHHHHHHHHHHTTCTTTEEEEE-
T ss_pred ccCcEEEEeCCcCcHHHHHHHHh-----------------CC---CCEEEEecCH-HHHHHHHHHHHhcCCCCceEEEe-
Confidence 34579999999999988877622 12 3567778884 2211111111 11 1222333
Q ss_pred cCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhc
Q 017702 137 LPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELV 216 (367)
Q Consensus 137 vp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~ 216 (367)
+++.+ -+|. .+|+++++.++|.+++ .+...+|+.-.+-|+
T Consensus 240 --~d~~~-~~~~-~~D~v~~~~vl~~~~~------------------------------------~~~~~~l~~~~~~L~ 279 (360)
T 1tw3_A 240 --GDFFE-PLPR-KADAIILSFVLLNWPD------------------------------------HDAVRILTRCAEALE 279 (360)
T ss_dssp --CCTTS-CCSS-CEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHTEE
T ss_pred --CCCCC-CCCC-CccEEEEcccccCCCH------------------------------------HHHHHHHHHHHHhcC
Confidence 34554 3454 4999999999986431 134568888899999
Q ss_pred cCceEEEEeec-ccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEE
Q 017702 217 PGGLMVLILAA-VVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKM 295 (367)
Q Consensus 217 pGG~lvl~~~g-~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~l 295 (367)
|||++++.-.. ..++.. ..+..+.+. ..|+..| ...++.+|+++++++.| |++.++
T Consensus 280 pgG~l~i~e~~~~~~~~~--------~~~~~~~~~-~~~~~~~-------------~~~~t~~e~~~ll~~aG-f~~~~~ 336 (360)
T 1tw3_A 280 PGGRILIHERDDLHENSF--------NEQFTELDL-RMLVFLG-------------GALRTREKWDGLAASAG-LVVEEV 336 (360)
T ss_dssp EEEEEEEEECCBCGGGCC--------SHHHHHHHH-HHHHHHS-------------CCCCBHHHHHHHHHHTT-EEEEEE
T ss_pred CCcEEEEEEEeccCCCCC--------cchhhhccH-HHhhhcC-------------CcCCCHHHHHHHHHHCC-CeEEEE
Confidence 99999876542 111111 011111111 1111112 13679999999999997 999887
Q ss_pred EEEe
Q 017702 296 EKLS 299 (367)
Q Consensus 296 E~~~ 299 (367)
....
T Consensus 337 ~~~~ 340 (360)
T 1tw3_A 337 RQLP 340 (360)
T ss_dssp EEEE
T ss_pred EeCC
Confidence 7654
|
| >3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=98.51 E-value=2.8e-07 Score=86.11 Aligned_cols=138 Identities=19% Similarity=0.287 Sum_probs=86.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCcc--ccceeeccCc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHA--RKYFAAGLPG 139 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~--~~~f~~gvp~ 139 (367)
...+|+|+|||+|.++..+.+. ..+|+-.|....-....-+.+... +--|..+.
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~----------------------g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d-- 175 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL----------------------GYDVTSWDHNENSIAFLNETKEKENLNISTALYD-- 175 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT----------------------TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECC--
T ss_pred CCCcEEEECCCCCHHHHHHHHC----------------------CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEec--
Confidence 3579999999999999877521 124666666532222111111110 12233332
Q ss_pred cccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 140 SFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
+.. +.+++++|+|+|+.++||++. .++..+|+.-.+-|+|||
T Consensus 176 -~~~-~~~~~~fD~i~~~~~~~~~~~------------------------------------~~~~~~l~~~~~~LkpgG 217 (286)
T 3m70_A 176 -INA-ANIQENYDFIVSTVVFMFLNR------------------------------------ERVPSIIKNMKEHTNVGG 217 (286)
T ss_dssp -GGG-CCCCSCEEEEEECSSGGGSCG------------------------------------GGHHHHHHHHHHTEEEEE
T ss_pred -ccc-ccccCCccEEEEccchhhCCH------------------------------------HHHHHHHHHHHHhcCCCc
Confidence 222 233789999999999999752 155679999999999999
Q ss_pred eEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEE
Q 017702 220 LMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEK 297 (367)
Q Consensus 220 ~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~ 297 (367)
++++.... .....+. -..+.+..+.+|+++.+.. |++..++.
T Consensus 218 ~l~i~~~~-~~~~~~~--------------------------------~~~~~~~~~~~~l~~~~~~---~~~~~~~~ 259 (286)
T 3m70_A 218 YNLIVAAM-STDDVPC--------------------------------PLPFSFTFAENELKEYYKD---WEFLEYNE 259 (286)
T ss_dssp EEEEEEEB-CCSSSCC--------------------------------SSCCSCCBCTTHHHHHTTT---SEEEEEEC
T ss_pred EEEEEEec-CCCCCCC--------------------------------CCCccccCCHHHHHHHhcC---CEEEEEEc
Confidence 98887765 2221100 0122456788899998753 88887753
|
| >1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=1.6e-06 Score=84.07 Aligned_cols=151 Identities=17% Similarity=0.160 Sum_probs=91.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCccc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSF 141 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SF 141 (367)
+..+|+|+|||+|..+..+.+.. | .++++.-|+| . .......... +.-+.++|
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~-----------------p---~~~~~~~D~~--~---~~~~a~~~~~--v~~~~~d~ 245 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIF-----------------P---HLKCTVFDQP--Q---VVGNLTGNEN--LNFVGGDM 245 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHC-----------------T---TSEEEEEECH--H---HHSSCCCCSS--EEEEECCT
T ss_pred CCCEEEEECCCcCHHHHHHHHHC-----------------C---CCeEEEeccH--H---HHhhcccCCC--cEEEeCcc
Confidence 34799999999999988776322 3 3466777885 2 1222211111 33345567
Q ss_pred cccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc---C
Q 017702 142 HSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP---G 218 (367)
Q Consensus 142 y~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p---G 218 (367)
++ -+| ++|+++++.++|++++ .+...+|+.-.+-|+| |
T Consensus 246 ~~-~~~--~~D~v~~~~vlh~~~d------------------------------------~~~~~~l~~~~~~L~p~~~g 286 (358)
T 1zg3_A 246 FK-SIP--SADAVLLKWVLHDWND------------------------------------EQSLKILKNSKEAISHKGKD 286 (358)
T ss_dssp TT-CCC--CCSEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHTGGGGGG
T ss_pred CC-CCC--CceEEEEcccccCCCH------------------------------------HHHHHHHHHHHHhCCCCCCC
Confidence 76 455 4999999999997542 1344689999999999 9
Q ss_pred ceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEE
Q 017702 219 GLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEK 297 (367)
Q Consensus 219 G~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~ 297 (367)
|++++.-.. .++... .........+.+. .-|+..| -..++.+|+++++++.| |++.++..
T Consensus 287 G~l~i~e~~-~~~~~~---~~~~~~~~~~~d~-~~~~~~~-------------g~~~t~~e~~~ll~~aG-f~~~~~~~ 346 (358)
T 1zg3_A 287 GKVIIIDIS-IDETSD---DRGLTELQLDYDL-VMLTMFL-------------GKERTKQEWEKLIYDAG-FSSYKITP 346 (358)
T ss_dssp CEEEEEECE-ECTTCS---CHHHHHHHHHHHH-HHHHHHS-------------CCCEEHHHHHHHHHHTT-CCEEEEEE
T ss_pred cEEEEEEec-cCCCCc---cchhhhHHHhhCH-HHhccCC-------------CCCCCHHHHHHHHHHcC-CCeeEEEe
Confidence 999887654 332210 0000001111111 1111111 12579999999999997 98877654
|
| >1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A* | Back alignment and structure |
|---|
Probab=98.45 E-value=4.6e-06 Score=80.58 Aligned_cols=150 Identities=15% Similarity=0.225 Sum_probs=91.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCccc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSF 141 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SF 141 (367)
+..+|+|+|||+|..+..+.+. .| ..+++.-|+|. .......... +.-+.++|
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~-----------------~p---~~~~~~~D~~~-----~~~~a~~~~~--v~~~~~d~ 240 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICET-----------------FP---KLKCIVFDRPQ-----VVENLSGSNN--LTYVGGDM 240 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHH-----------------CT---TCEEEEEECHH-----HHTTCCCBTT--EEEEECCT
T ss_pred cCceEEEeCCCccHHHHHHHHH-----------------CC---CCeEEEeeCHH-----HHhhcccCCC--cEEEeccc
Confidence 4579999999999988877622 13 45788888842 2222211111 23344567
Q ss_pred cccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc---C
Q 017702 142 HSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP---G 218 (367)
Q Consensus 142 y~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p---G 218 (367)
++ -+|+ +|+++++.++|.+++ .+...+|+..++-|+| |
T Consensus 241 ~~-~~p~--~D~v~~~~~lh~~~d------------------------------------~~~~~~l~~~~~~L~p~~~g 281 (352)
T 1fp2_A 241 FT-SIPN--ADAVLLKYILHNWTD------------------------------------KDCLRILKKCKEAVTNDGKR 281 (352)
T ss_dssp TT-CCCC--CSEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHHSGGGCC
T ss_pred cC-CCCC--ccEEEeehhhccCCH------------------------------------HHHHHHHHHHHHhCCCCCCC
Confidence 66 3563 999999999995431 1334689999999999 9
Q ss_pred ceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEE
Q 017702 219 GLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEK 297 (367)
Q Consensus 219 G~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~ 297 (367)
|++++.-.. .++... . ..... . ..+.++.-- . + +-..++.+|+++++++.| |++.++..
T Consensus 282 G~l~i~e~~-~~~~~~----~-~~~~~-~-~~~~d~~~~--------~-~--~g~~~t~~e~~~ll~~aG-f~~~~~~~ 340 (352)
T 1fp2_A 282 GKVTIIDMV-IDKKKD----E-NQVTQ-I-KLLMDVNMA--------C-L--NGKERNEEEWKKLFIEAG-FQHYKISP 340 (352)
T ss_dssp CEEEEEECE-ECTTTS----C-HHHHH-H-HHHHHHHGG--------G-G--TCCCEEHHHHHHHHHHTT-CCEEEEEE
T ss_pred cEEEEEEee-cCCCCC----c-cchhh-h-HhhccHHHH--------h-c--cCCCCCHHHHHHHHHHCC-CCeeEEEe
Confidence 999888765 333211 0 00001 1 111221100 0 0 122468999999999997 98877654
|
| >2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=98.40 E-value=4e-07 Score=80.47 Aligned_cols=109 Identities=17% Similarity=0.193 Sum_probs=69.7
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC--ccccceeeccCc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP--HARKYFAAGLPG 139 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~--~~~~~f~~gvp~ 139 (367)
...+|+|+|||+|..+..++.. + ..+++--|....-....-+.+. ..+-.|..+.
T Consensus 23 ~~~~vLDiGcG~G~~~~~~~~~------------------~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d-- 79 (209)
T 2p8j_A 23 LDKTVLDCGAGGDLPPLSIFVE------------------D---GYKTYGIEISDLQLKKAENFSRENNFKLNISKGD-- 79 (209)
T ss_dssp SCSEEEEESCCSSSCTHHHHHH------------------T---TCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECC--
T ss_pred CCCEEEEECCCCCHHHHHHHHh------------------C---CCEEEEEECCHHHHHHHHHHHHhcCCceEEEECc--
Confidence 3579999999999987655421 1 2256666765322221111110 0111233332
Q ss_pred cccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 140 SFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
+..--+|++++|+++++.++|+++ + .|...+|+.-++-|+|||
T Consensus 80 -~~~~~~~~~~fD~v~~~~~l~~~~--~----------------------------------~~~~~~l~~~~~~LkpgG 122 (209)
T 2p8j_A 80 -IRKLPFKDESMSFVYSYGTIFHMR--K----------------------------------NDVKEAIDEIKRVLKPGG 122 (209)
T ss_dssp -TTSCCSCTTCEEEEEECSCGGGSC--H----------------------------------HHHHHHHHHHHHHEEEEE
T ss_pred -hhhCCCCCCceeEEEEcChHHhCC--H----------------------------------HHHHHHHHHHHHHcCCCc
Confidence 223235788999999999999863 1 256678999999999999
Q ss_pred eEEEEeecccCC
Q 017702 220 LMVLILAAVVPD 231 (367)
Q Consensus 220 ~lvl~~~g~~~n 231 (367)
++++..+. .++
T Consensus 123 ~l~~~~~~-~~~ 133 (209)
T 2p8j_A 123 LACINFLT-TKD 133 (209)
T ss_dssp EEEEEEEE-TTS
T ss_pred EEEEEEec-ccc
Confidence 99999998 544
|
| >3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=98.40 E-value=1.2e-06 Score=78.31 Aligned_cols=151 Identities=13% Similarity=0.094 Sum_probs=83.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC-------Ccccccee
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL-------PHARKYFA 134 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l-------~~~~~~f~ 134 (367)
...+|+|+|||+|..+..+.+. .| ..+|+--|+...-...+.+.. ...+-.|.
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~-----------------~p---~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~ 86 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQ-----------------NP---SRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYL 86 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHH-----------------CT---TEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHH-----------------CC---CCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEE
Confidence 4589999999999999887632 12 347888888765444332111 00122344
Q ss_pred eccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHh
Q 017702 135 AGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEE 214 (367)
Q Consensus 135 ~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~E 214 (367)
.+. +.+--+++++ |.++. .+.|..... ..-.|...+|+.-++-
T Consensus 87 ~~d---~~~l~~~~~~-d~v~~--~~~~~~~~~-------------------------------~~~~~~~~~l~~~~~~ 129 (218)
T 3mq2_A 87 WAT---AERLPPLSGV-GELHV--LMPWGSLLR-------------------------------GVLGSSPEMLRGMAAV 129 (218)
T ss_dssp ECC---STTCCSCCCE-EEEEE--ESCCHHHHH-------------------------------HHHTSSSHHHHHHHHT
T ss_pred ecc---hhhCCCCCCC-CEEEE--Eccchhhhh-------------------------------hhhccHHHHHHHHHHH
Confidence 443 3333345555 66662 222322100 0001223588888999
Q ss_pred hccCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCccc--CCHHHHHHHHHhCCceEE
Q 017702 215 LVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYN--ATPKELEAIIRTNGNFTI 292 (367)
Q Consensus 215 L~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~--~s~eE~~~~l~~~g~F~I 292 (367)
|||||++++.+.. ..-... . . ++. ..|.+. ...+++...+++.| |+|
T Consensus 130 LkpgG~l~~~~~~-~~~~~~-~-------------------------~-~~~--~~~~~~~~~~~~~l~~~l~~aG-f~i 178 (218)
T 3mq2_A 130 CRPGASFLVALNL-HAWRPS-V-------------------------P-EVG--EHPEPTPDSADEWLAPRYAEAG-WKL 178 (218)
T ss_dssp EEEEEEEEEEEEG-GGBTTB-C-------------------------G-GGT--TCCCCCHHHHHHHHHHHHHHTT-EEE
T ss_pred cCCCcEEEEEecc-cccccc-c-------------------------c-ccc--cCCccchHHHHHHHHHHHHHcC-CCc
Confidence 9999999997754 211000 0 0 001 111111 12456888899887 999
Q ss_pred eEEEEEec
Q 017702 293 EKMEKLSQ 300 (367)
Q Consensus 293 ~~lE~~~~ 300 (367)
..++.+..
T Consensus 179 ~~~~~~~~ 186 (218)
T 3mq2_A 179 ADCRYLEP 186 (218)
T ss_dssp EEEEEECH
T ss_pred eeeeccch
Confidence 99887743
|
| >1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53 | Back alignment and structure |
|---|
Probab=98.39 E-value=9.6e-07 Score=79.06 Aligned_cols=113 Identities=11% Similarity=0.062 Sum_probs=68.3
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC---ccccceeeccCc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP---HARKYFAAGLPG 139 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~---~~~~~f~~gvp~ 139 (367)
.-+|+|+|||+|..++.+.... | ..+++--|+...-....-+.+. ..+-.|..+...
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~-----------------p---~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~ 101 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQN-----------------P---DINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGS 101 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHC-----------------T---TSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSS
T ss_pred CCeEEEEccCcCHHHHHHHHHC-----------------C---CCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHH
Confidence 4689999999999998776321 2 3467777775422222211111 112234444433
Q ss_pred cccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 140 SFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
. +...+|++++|+++++...+|........ + -+...||+.-++-|+|||
T Consensus 102 ~-~~~~~~~~~~D~i~~~~~~~~~~~~~~~~-----------~-------------------~~~~~~l~~~~~~LkpgG 150 (214)
T 1yzh_A 102 D-LTDYFEDGEIDRLYLNFSDPWPKKRHEKR-----------R-------------------LTYKTFLDTFKRILPENG 150 (214)
T ss_dssp C-GGGTSCTTCCSEEEEESCCCCCSGGGGGG-----------S-------------------TTSHHHHHHHHHHSCTTC
T ss_pred H-HHhhcCCCCCCEEEEECCCCccccchhhh-----------c-------------------cCCHHHHHHHHHHcCCCc
Confidence 3 23447788999999998777743110000 0 023358888889999999
Q ss_pred eEEEEee
Q 017702 220 LMVLILA 226 (367)
Q Consensus 220 ~lvl~~~ 226 (367)
.+++.+.
T Consensus 151 ~l~~~~~ 157 (214)
T 1yzh_A 151 EIHFKTD 157 (214)
T ss_dssp EEEEEES
T ss_pred EEEEEeC
Confidence 9988763
|
| >4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=98.35 E-value=1.1e-06 Score=80.94 Aligned_cols=107 Identities=13% Similarity=0.071 Sum_probs=72.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCcc-ccceeeccCcc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHA-RKYFAAGLPGS 140 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~-~~~f~~gvp~S 140 (367)
.-.+|+|+|||+|..|..+.+.+ -| +=.||--|....--..+-+..... +-..+.+..+.
T Consensus 77 pG~~VldlG~G~G~~~~~la~~V----------------G~---~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~ 137 (233)
T 4df3_A 77 EGDRILYLGIASGTTASHMSDII----------------GP---RGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARF 137 (233)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH----------------CT---TCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTC
T ss_pred CCCEEEEecCcCCHHHHHHHHHh----------------CC---CceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccC
Confidence 34899999999999999887544 11 225777776643333333333322 23456677666
Q ss_pred ccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCce
Q 017702 141 FHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGL 220 (367)
Q Consensus 141 Fy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~ 220 (367)
...-.++.+++|++++..+.|| |-..++..-..-|||||+
T Consensus 138 p~~~~~~~~~vDvVf~d~~~~~----------------------------------------~~~~~l~~~~r~LKpGG~ 177 (233)
T 4df3_A 138 PEKYRHLVEGVDGLYADVAQPE----------------------------------------QAAIVVRNARFFLRDGGY 177 (233)
T ss_dssp GGGGTTTCCCEEEEEECCCCTT----------------------------------------HHHHHHHHHHHHEEEEEE
T ss_pred ccccccccceEEEEEEeccCCh----------------------------------------hHHHHHHHHHHhccCCCE
Confidence 6666677889999998665555 223577777888999999
Q ss_pred EEEEeec
Q 017702 221 MVLILAA 227 (367)
Q Consensus 221 lvl~~~g 227 (367)
++++.-.
T Consensus 178 lvI~ik~ 184 (233)
T 4df3_A 178 MLMAIKA 184 (233)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 9998754
|
| >2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41 | Back alignment and structure |
|---|
Probab=98.28 E-value=3.1e-06 Score=77.94 Aligned_cols=162 Identities=18% Similarity=0.255 Sum_probs=90.7
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCccc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSF 141 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SF 141 (367)
...+|+|+|||+|..+..+.+. ..+++..|+...-....-+... ..+..+. +
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~----------------------~~~v~gvD~s~~~l~~a~~~~~---~~~~~~d---~ 105 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER----------------------GFEVVLVDPSKEMLEVAREKGV---KNVVEAK---A 105 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT----------------------TCEEEEEESCHHHHHHHHHHTC---SCEEECC---T
T ss_pred CCCeEEEeCCCcCHHHHHHHHc----------------------CCeEEEEeCCHHHHHHHHhhcC---CCEEECc---H
Confidence 4579999999999998876511 1257777775432222211222 1144443 3
Q ss_pred cccCCCCCceeEEEecc-ccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCce
Q 017702 142 HSRLFPRSSIHFVHTSY-ALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGL 220 (367)
Q Consensus 142 y~~l~P~~svd~~~S~~-alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~ 220 (367)
..--+|++++|+++++. .+||..+ ...+|+.-.+-|+|||+
T Consensus 106 ~~~~~~~~~fD~v~~~~~~~~~~~~--------------------------------------~~~~l~~~~~~LkpgG~ 147 (260)
T 2avn_A 106 EDLPFPSGAFEAVLALGDVLSYVEN--------------------------------------KDKAFSEIRRVLVPDGL 147 (260)
T ss_dssp TSCCSCTTCEEEEEECSSHHHHCSC--------------------------------------HHHHHHHHHHHEEEEEE
T ss_pred HHCCCCCCCEEEEEEcchhhhcccc--------------------------------------HHHHHHHHHHHcCCCeE
Confidence 33346789999999976 5677442 33588888999999999
Q ss_pred EEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEEec
Q 017702 221 MVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLSQ 300 (367)
Q Consensus 221 lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~~~ 300 (367)
+++..++ ...... .......|+ .+..+...|...... ....++.++.+++|++++ .| |++.+.+....
T Consensus 148 l~~~~~~-~~~~~~--~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l---aG-f~~~~~~~~~~ 215 (260)
T 2avn_A 148 LIATVDN-FYTFLQ--QMIEKDAWD----QITRFLKTQTTSVGT-TLFSFNSYAFKPEDLDSL---EG-FETVDIRGIGV 215 (260)
T ss_dssp EEEEEEB-HHHHHH--HHHHTTCHH----HHHHHHHHCEEEEEC-SSEEEEEECBCGGGGSSC---TT-EEEEEEEEECS
T ss_pred EEEEeCC-hHHHHH--HhhcchhHH----HHHHHHhccccccCC-CceeEEEeccCHHHHHHh---cC-ceEEEEECCCC
Confidence 9999887 321000 000000011 112222334221000 001112236788998887 65 99988877654
Q ss_pred C
Q 017702 301 P 301 (367)
Q Consensus 301 p 301 (367)
.
T Consensus 216 ~ 216 (260)
T 2avn_A 216 M 216 (260)
T ss_dssp S
T ss_pred c
Confidence 3
|
| >3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A* | Back alignment and structure |
|---|
Probab=98.28 E-value=8.7e-07 Score=80.42 Aligned_cols=144 Identities=13% Similarity=0.183 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHHHHH-HHhhhcc-cccCCCCCCCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcce
Q 017702 29 TYQRGVVDAAKELISEA-IADKLDL-KILGFDDTLKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALE 106 (367)
Q Consensus 29 ~~Q~~~~~~~~~ll~~a-i~~~~~~-~~~~~~~~~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e 106 (367)
..|+++++...|.+.-- -...++. ..+ ....-+|+|+|||+|..++.+.+. .| +
T Consensus 3 ~~q~~~~~~~~~~~~~~~~~~~~d~~~~f----~~~~~~vLDiGcG~G~~~~~lA~~-----------------~p---~ 58 (218)
T 3dxy_A 3 SGQEHALENYWPVMGVEFSEDMLDFPALF----GREAPVTLEIGFGMGASLVAMAKD-----------------RP---E 58 (218)
T ss_dssp ----CHHHHHHHHHBCCCCSSCCCHHHHH----SSCCCEEEEESCTTCHHHHHHHHH-----------------CT---T
T ss_pred HHHHHHHHHHhHHhCCCCCCCCCCHHHHc----CCCCCeEEEEeeeChHHHHHHHHH-----------------CC---C
Confidence 45777777777765310 0000000 011 124579999999999999877632 13 3
Q ss_pred eEEEEcCCCccchHHHhhcC---CccccceeeccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcc
Q 017702 107 FQVFLNDHSDNDFNTLFKSL---PHARKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSI 183 (367)
Q Consensus 107 ~~v~~nDlp~NDFn~lf~~l---~~~~~~f~~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i 183 (367)
..|+--|...+-....-+.+ ...+-.|..+....+....+|++++|.+++++...|-..... +.++
T Consensus 59 ~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~~~p~~~~~~~-----------~rr~ 127 (218)
T 3dxy_A 59 QDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFFPDPWHKARHN-----------KRRI 127 (218)
T ss_dssp SEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEESCCCCCSGGGG-----------GGSS
T ss_pred CeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeCCCCccchhhh-----------hhhh
Confidence 46777777654333322222 111233555554444445688999999999998888432110 0000
Q ss_pred cccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEEEEee
Q 017702 184 QCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILA 226 (367)
Q Consensus 184 ~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~ 226 (367)
. -..||+.-++-|+|||+|++.+-
T Consensus 128 ~-------------------~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 128 V-------------------QVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp C-------------------SHHHHHHHHHHEEEEEEEEEEES
T ss_pred h-------------------hHHHHHHHHHHcCCCcEEEEEeC
Confidence 0 01488888899999999988874
|
| >3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=98.27 E-value=1.5e-06 Score=79.87 Aligned_cols=67 Identities=16% Similarity=0.238 Sum_probs=42.6
Q ss_pred HHHHHHHhhccCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHh
Q 017702 207 FLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRT 286 (367)
Q Consensus 207 fL~~Ra~EL~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~ 286 (367)
+|+.-++-|+|||+|++.+ . +. |+ ..+..+-..|++.... .+..+.+++.+++++
T Consensus 119 ~l~~i~rvLkpgG~lv~~~-~--p~------------~e---~~~~~~~~~G~~~d~~-------~~~~~~~~l~~~l~~ 173 (232)
T 3opn_A 119 ILPPLYEILEKNGEVAALI-K--PQ------------FE---AGREQVGKNGIIRDPK-------VHQMTIEKVLKTATQ 173 (232)
T ss_dssp THHHHHHHSCTTCEEEEEE-C--HH------------HH---SCHHHHC-CCCCCCHH-------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCCEEEEEE-C--cc------------cc---cCHHHhCcCCeecCcc-------hhHHHHHHHHHHHHH
Confidence 6788889999999999965 2 11 11 1122222345443211 123478999999999
Q ss_pred CCceEEeEEEEEe
Q 017702 287 NGNFTIEKMEKLS 299 (367)
Q Consensus 287 ~g~F~I~~lE~~~ 299 (367)
.| |++..++...
T Consensus 174 aG-f~v~~~~~~p 185 (232)
T 3opn_A 174 LG-FSVKGLTFSP 185 (232)
T ss_dssp HT-EEEEEEEECS
T ss_pred CC-CEEEEEEEcc
Confidence 97 9998887653
|
| >1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43 | Back alignment and structure |
|---|
Probab=98.24 E-value=6.3e-06 Score=75.03 Aligned_cols=104 Identities=17% Similarity=0.311 Sum_probs=63.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc--cccceeeccCc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH--ARKYFAAGLPG 139 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~--~~~~f~~gvp~ 139 (367)
+..+|+|+|||+|..+..+.+. ..+++-.|+...-....-+.... .+-.|..+.
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~----------------------~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d-- 96 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAER----------------------GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGD-- 96 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHT----------------------TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESC--
T ss_pred CCCEEEEeCCCCCHHHHHHHHC----------------------CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECC--
Confidence 4579999999999998877521 12466667653221111111110 111233333
Q ss_pred cccccCCCCCceeEEEecc-ccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccC
Q 017702 140 SFHSRLFPRSSIHFVHTSY-ALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPG 218 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~-alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 218 (367)
+.+ +.+++++|++++.. .+++++ ..|...+|+.-++-|+||
T Consensus 97 -~~~-~~~~~~fD~v~~~~~~~~~~~------------------------------------~~~~~~~l~~~~~~L~pg 138 (252)
T 1wzn_A 97 -VLE-IAFKNEFDAVTMFFSTIMYFD------------------------------------EEDLRKLFSKVAEALKPG 138 (252)
T ss_dssp -GGG-CCCCSCEEEEEECSSGGGGSC------------------------------------HHHHHHHHHHHHHHEEEE
T ss_pred -hhh-cccCCCccEEEEcCCchhcCC------------------------------------HHHHHHHHHHHHHHcCCC
Confidence 222 33457899999864 455532 025667899999999999
Q ss_pred ceEEEEeec
Q 017702 219 GLMVLILAA 227 (367)
Q Consensus 219 G~lvl~~~g 227 (367)
|++++.+..
T Consensus 139 G~li~~~~~ 147 (252)
T 1wzn_A 139 GVFITDFPC 147 (252)
T ss_dssp EEEEEEEEC
T ss_pred eEEEEeccc
Confidence 999988754
|
| >3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp} | Back alignment and structure |
|---|
Probab=98.23 E-value=4e-06 Score=74.12 Aligned_cols=99 Identities=14% Similarity=0.124 Sum_probs=60.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC---CccccceeeccC
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL---PHARKYFAAGLP 138 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l---~~~~~~f~~gvp 138 (367)
...+|+|+|||+|..++.+.+ .+ .-+++..|....-....-+.+ ...+--+..+.
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~~------------------~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d- 117 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAHK------------------LG---AKSVLATDISDESMTAAEENAALNGIYDIALQKTS- 117 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHHH------------------TT---CSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESS-
T ss_pred CCCEEEEECCCCCHHHHHHHH------------------CC---CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecc-
Confidence 347999999999988876541 01 125777777532211111111 11111233333
Q ss_pred ccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccC
Q 017702 139 GSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPG 218 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 218 (367)
+.. ++++++|+++++..+||+ ..+|+.-.+-|+||
T Consensus 118 --~~~--~~~~~fD~i~~~~~~~~~-----------------------------------------~~~l~~~~~~L~~g 152 (205)
T 3grz_A 118 --LLA--DVDGKFDLIVANILAEIL-----------------------------------------LDLIPQLDSHLNED 152 (205)
T ss_dssp --TTT--TCCSCEEEEEEESCHHHH-----------------------------------------HHHGGGSGGGEEEE
T ss_pred --ccc--cCCCCceEEEECCcHHHH-----------------------------------------HHHHHHHHHhcCCC
Confidence 222 346899999998777663 24666677889999
Q ss_pred ceEEEEeec
Q 017702 219 GLMVLILAA 227 (367)
Q Consensus 219 G~lvl~~~g 227 (367)
|++++....
T Consensus 153 G~l~~~~~~ 161 (205)
T 3grz_A 153 GQVIFSGID 161 (205)
T ss_dssp EEEEEEEEE
T ss_pred CEEEEEecC
Confidence 999998765
|
| >3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=98.21 E-value=1.2e-06 Score=81.97 Aligned_cols=101 Identities=12% Similarity=0.034 Sum_probs=64.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCccc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSF 141 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SF 141 (367)
...+|+|+|||+|..|+.+.+. -.+|+--|+..+-....=+.+... + +.+.+
T Consensus 45 ~g~~VLDlGcGtG~~a~~La~~----------------------g~~V~gvD~S~~ml~~Ar~~~~~~---~---v~~~~ 96 (261)
T 3iv6_A 45 PGSTVAVIGASTRFLIEKALER----------------------GASVTVFDFSQRMCDDLAEALADR---C---VTIDL 96 (261)
T ss_dssp TTCEEEEECTTCHHHHHHHHHT----------------------TCEEEEEESCHHHHHHHHHHTSSS---C---CEEEE
T ss_pred CcCEEEEEeCcchHHHHHHHhc----------------------CCEEEEEECCHHHHHHHHHHHHhc---c---ceeee
Confidence 4579999999999999887621 014666676543322222222211 1 12222
Q ss_pred cccC-----CCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhc
Q 017702 142 HSRL-----FPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELV 216 (367)
Q Consensus 142 y~~l-----~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~ 216 (367)
..-- .+++++|+++|+.++||+.. .|+..+|+.-++-|
T Consensus 97 ~~~~~~~~~~~~~~fD~Vv~~~~l~~~~~------------------------------------~~~~~~l~~l~~lL- 139 (261)
T 3iv6_A 97 LDITAEIPKELAGHFDFVLNDRLINRFTT------------------------------------EEARRACLGMLSLV- 139 (261)
T ss_dssp CCTTSCCCGGGTTCCSEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHH-
T ss_pred eecccccccccCCCccEEEEhhhhHhCCH------------------------------------HHHHHHHHHHHHhC-
Confidence 2111 12578999999999998641 25566788888888
Q ss_pred cCceEEEEeec
Q 017702 217 PGGLMVLILAA 227 (367)
Q Consensus 217 pGG~lvl~~~g 227 (367)
|||++++++.-
T Consensus 140 PGG~l~lS~~~ 150 (261)
T 3iv6_A 140 GSGTVRASVKL 150 (261)
T ss_dssp TTSEEEEEEEB
T ss_pred cCcEEEEEecc
Confidence 99999998863
|
| >1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=3e-06 Score=71.84 Aligned_cols=112 Identities=17% Similarity=0.137 Sum_probs=68.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCccc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSF 141 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SF 141 (367)
...+|+|+|||+|..+..+.+.. .| ..+++..|+.. - ..+ .+-.+..+.....
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~~----------------~~---~~~v~~~D~~~-~-----~~~--~~~~~~~~d~~~~ 74 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQI----------------GG---KGRIIACDLLP-M-----DPI--VGVDFLQGDFRDE 74 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHH----------------CT---TCEEEEEESSC-C-----CCC--TTEEEEESCTTSH
T ss_pred CCCeEEEeCCCCCHHHHHHHHHh----------------CC---CCeEEEEECcc-c-----ccc--CcEEEEEcccccc
Confidence 34699999999999998776433 11 23566767643 1 111 1222333332111
Q ss_pred -----cccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhc
Q 017702 142 -----HSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELV 216 (367)
Q Consensus 142 -----y~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~ 216 (367)
..+.++++++|+++++..+||...... +. .........+|+.-.+-|+
T Consensus 75 ~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~----------------------~~-----~~~~~~~~~~l~~~~~~L~ 127 (180)
T 1ej0_A 75 LVMKALLERVGDSKVQVVMSDMAPNMSGTPAV----------------------DI-----PRAMYLVELALEMCRDVLA 127 (180)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCCCCCSCHHH----------------------HH-----HHHHHHHHHHHHHHHHHEE
T ss_pred hhhhhhhccCCCCceeEEEECCCccccCCCcc----------------------ch-----HHHHHHHHHHHHHHHHHcC
Confidence 011167789999999999999653210 00 0011223678888889999
Q ss_pred cCceEEEEeec
Q 017702 217 PGGLMVLILAA 227 (367)
Q Consensus 217 pGG~lvl~~~g 227 (367)
|||++++..+.
T Consensus 128 ~gG~l~~~~~~ 138 (180)
T 1ej0_A 128 PGGSFVVKVFQ 138 (180)
T ss_dssp EEEEEEEEEES
T ss_pred CCcEEEEEEec
Confidence 99999998876
|
| >3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=9.2e-06 Score=78.80 Aligned_cols=102 Identities=16% Similarity=0.151 Sum_probs=65.2
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC----Cc-cccceeecc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL----PH-ARKYFAAGL 137 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l----~~-~~~~f~~gv 137 (367)
..+|+|+|||+|..++.+.+. + .-+|+--|+. . .-...+.. .- .+--|..+.
T Consensus 67 ~~~VLDvGcG~G~~~~~la~~------------------g---~~~v~gvD~s-~-~l~~a~~~~~~~~~~~~v~~~~~d 123 (349)
T 3q7e_A 67 DKVVLDVGSGTGILCMFAAKA------------------G---ARKVIGIECS-S-ISDYAVKIVKANKLDHVVTIIKGK 123 (349)
T ss_dssp TCEEEEESCTTSHHHHHHHHT------------------T---CSEEEEEECS-T-HHHHHHHHHHHTTCTTTEEEEESC
T ss_pred CCEEEEEeccchHHHHHHHHC------------------C---CCEEEEECcH-H-HHHHHHHHHHHcCCCCcEEEEECc
Confidence 479999999999988877521 1 1257777775 2 22222221 11 112344443
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
..+--+|.+++|+|+|....+++...+ ++..+|..+.+-|+|
T Consensus 124 ---~~~~~~~~~~fD~Iis~~~~~~l~~~~-----------------------------------~~~~~l~~~~r~Lkp 165 (349)
T 3q7e_A 124 ---VEEVELPVEKVDIIISEWMGYCLFYES-----------------------------------MLNTVLHARDKWLAP 165 (349)
T ss_dssp ---TTTCCCSSSCEEEEEECCCBBTBTBTC-----------------------------------CHHHHHHHHHHHEEE
T ss_pred ---HHHccCCCCceEEEEEccccccccCch-----------------------------------hHHHHHHHHHHhCCC
Confidence 333346789999999987666654322 555799999999999
Q ss_pred CceEEEEe
Q 017702 218 GGLMVLIL 225 (367)
Q Consensus 218 GG~lvl~~ 225 (367)
||+|+...
T Consensus 166 gG~li~~~ 173 (349)
T 3q7e_A 166 DGLIFPDR 173 (349)
T ss_dssp EEEEESCE
T ss_pred CCEEcccc
Confidence 99997443
|
| >3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae} | Back alignment and structure |
|---|
Probab=98.14 E-value=5.9e-06 Score=70.82 Aligned_cols=101 Identities=13% Similarity=0.112 Sum_probs=65.3
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC---Cccccceeecc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL---PHARKYFAAGL 137 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l---~~~~~~f~~gv 137 (367)
....+|+|+|||+|..++.+... .| ..+++..|....-....-+.+ ....++++.+.
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~-----------------~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d 83 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRS-----------------TP---QTTAVCFEISEERRERILSNAINLGVSDRIAVQQG 83 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTT-----------------SS---SEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECC
T ss_pred cCCCeEEEeCCCCCHHHHHHHHH-----------------CC---CCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecc
Confidence 34579999999999998877621 12 347888888643322222211 11112344433
Q ss_pred CccccccCCCC--CceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhh
Q 017702 138 PGSFHSRLFPR--SSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEEL 215 (367)
Q Consensus 138 p~SFy~~l~P~--~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL 215 (367)
..+ .+|. +++|+++++.++|| + .+|+.-.+-|
T Consensus 84 ---~~~-~~~~~~~~~D~i~~~~~~~~----~--------------------------------------~~l~~~~~~L 117 (178)
T 3hm2_A 84 ---APR-AFDDVPDNPDVIFIGGGLTA----P--------------------------------------GVFAAAWKRL 117 (178)
T ss_dssp ---TTG-GGGGCCSCCSEEEECC-TTC----T--------------------------------------THHHHHHHTC
T ss_pred ---hHh-hhhccCCCCCEEEECCcccH----H--------------------------------------HHHHHHHHhc
Confidence 222 3344 89999999999988 1 2788888999
Q ss_pred ccCceEEEEeec
Q 017702 216 VPGGLMVLILAA 227 (367)
Q Consensus 216 ~pGG~lvl~~~g 227 (367)
+|||++++....
T Consensus 118 ~~gG~l~~~~~~ 129 (178)
T 3hm2_A 118 PVGGRLVANAVT 129 (178)
T ss_dssp CTTCEEEEEECS
T ss_pred CCCCEEEEEeec
Confidence 999999988875
|
| >2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=98.13 E-value=1.2e-05 Score=70.56 Aligned_cols=55 Identities=9% Similarity=0.041 Sum_probs=37.0
Q ss_pred CCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEEEEe
Q 017702 146 FPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLIL 225 (367)
Q Consensus 146 ~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~ 225 (367)
++++++|+++|..++||..... .+. + ...+....+|+.-.+-|+|||+|++.+
T Consensus 102 ~~~~~fD~v~~~~~~~~~g~~~----------------------~d~---~--~~~~~~~~~l~~~~~~LkpgG~lv~~~ 154 (201)
T 2plw_A 102 LQDKKIDIILSDAAVPCIGNKI----------------------DDH---L--NSCELTLSITHFMEQYINIGGTYIVKM 154 (201)
T ss_dssp HTTCCEEEEEECCCCCCCSCHH----------------------HHH---H--HHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCCcccEEEeCCCcCCCCCcc----------------------cCH---H--HHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 5778999999999999842100 000 0 011223457777788999999999987
Q ss_pred ec
Q 017702 226 AA 227 (367)
Q Consensus 226 ~g 227 (367)
+.
T Consensus 155 ~~ 156 (201)
T 2plw_A 155 YL 156 (201)
T ss_dssp EC
T ss_pred eC
Confidence 76
|
| >3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.13 E-value=1.9e-05 Score=69.03 Aligned_cols=107 Identities=15% Similarity=0.133 Sum_probs=64.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC---ccccceeeccC
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP---HARKYFAAGLP 138 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~---~~~~~f~~gvp 138 (367)
+..+|+|+|||+|..++.+++. + .-+|+.-|+...-....-+.+. ..+-.|..+.-
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~~------------------~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~ 102 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALSR------------------G---AASVLFVESDQRSAAVIARNIEALGLSGATLRRGAV 102 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT------------------T---CSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCH
T ss_pred CCCEEEEeCCCcCHHHHHHHHC------------------C---CCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccH
Confidence 3478999999999999876520 1 1156666765322221111111 01222444432
Q ss_pred ccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHH--hhc
Q 017702 139 GSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAE--ELV 216 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~--EL~ 216 (367)
..+... ++++++|++++...+||.. .++..+|....+ -|+
T Consensus 103 ~~~~~~-~~~~~fD~i~~~~p~~~~~-------------------------------------~~~~~~l~~~~~~~~L~ 144 (189)
T 3p9n_A 103 AAVVAA-GTTSPVDLVLADPPYNVDS-------------------------------------ADVDAILAALGTNGWTR 144 (189)
T ss_dssp HHHHHH-CCSSCCSEEEECCCTTSCH-------------------------------------HHHHHHHHHHHHSSSCC
T ss_pred HHHHhh-ccCCCccEEEECCCCCcch-------------------------------------hhHHHHHHHHHhcCccC
Confidence 222111 3578999999987776621 255567777777 899
Q ss_pred cCceEEEEeec
Q 017702 217 PGGLMVLILAA 227 (367)
Q Consensus 217 pGG~lvl~~~g 227 (367)
|||++++....
T Consensus 145 pgG~l~~~~~~ 155 (189)
T 3p9n_A 145 EGTVAVVERAT 155 (189)
T ss_dssp TTCEEEEEEET
T ss_pred CCeEEEEEecC
Confidence 99999999876
|
| >2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53 | Back alignment and structure |
|---|
Probab=98.11 E-value=1.5e-05 Score=71.65 Aligned_cols=114 Identities=12% Similarity=0.117 Sum_probs=66.8
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC---CccccceeeccCc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL---PHARKYFAAGLPG 139 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l---~~~~~~f~~gvp~ 139 (367)
..+|+|+|||+|..++.+.+. .| ..+++--|....-....-+.+ ...+--|..+.-.
T Consensus 39 ~~~vLDiGcG~G~~~~~la~~-----------------~p---~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~ 98 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISGMAKQ-----------------NP---DINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDAD 98 (213)
T ss_dssp CCEEEEECCTTSHHHHHHHHH-----------------CT---TSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGG
T ss_pred CceEEEEecCCCHHHHHHHHH-----------------CC---CCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHH
Confidence 468999999999999887632 12 345677776543222211111 1111223333322
Q ss_pred cccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 140 SFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
. ....+|++++|.++++++..|...... +.++ ....||+.-++-|+|||
T Consensus 99 ~-l~~~~~~~~~d~v~~~~~~p~~~~~~~-----------~~rl-------------------~~~~~l~~~~~~LkpgG 147 (213)
T 2fca_A 99 T-LTDVFEPGEVKRVYLNFSDPWPKKRHE-----------KRRL-------------------TYSHFLKKYEEVMGKGG 147 (213)
T ss_dssp G-HHHHCCTTSCCEEEEESCCCCCSGGGG-----------GGST-------------------TSHHHHHHHHHHHTTSC
T ss_pred H-HHhhcCcCCcCEEEEECCCCCcCcccc-----------cccc-------------------CcHHHHHHHHHHcCCCC
Confidence 2 223478899999998877777432100 0000 01358888889999999
Q ss_pred eEEEEeec
Q 017702 220 LMVLILAA 227 (367)
Q Consensus 220 ~lvl~~~g 227 (367)
.|++.+..
T Consensus 148 ~l~~~td~ 155 (213)
T 2fca_A 148 SIHFKTDN 155 (213)
T ss_dssp EEEEEESC
T ss_pred EEEEEeCC
Confidence 99988743
|
| >3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A* | Back alignment and structure |
|---|
Probab=98.10 E-value=1.9e-05 Score=77.80 Aligned_cols=108 Identities=20% Similarity=0.231 Sum_probs=69.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc--cccceeeccCc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH--ARKYFAAGLPG 139 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~--~~~~f~~gvp~ 139 (367)
+..+|+|+|||+|..++.+.+. ..+|+..|....-....-+++.. ..--|..+
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~----------------------g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~--- 287 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM----------------------GAEVVGVEDDLASVLSLQKGLEANALKAQALHS--- 287 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT----------------------TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEEC---
T ss_pred CCCEEEEEeeeCCHHHHHHHHc----------------------CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEc---
Confidence 3579999999999999988621 12566666643222111111111 01123333
Q ss_pred cccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 140 SFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
++..-+.+++++|+|+|+..+||...... .+...||+.-.+-|+|||
T Consensus 288 D~~~~~~~~~~fD~Ii~npp~~~~~~~~~---------------------------------~~~~~~l~~~~~~LkpGG 334 (381)
T 3dmg_A 288 DVDEALTEEARFDIIVTNPPFHVGGAVIL---------------------------------DVAQAFVNVAAARLRPGG 334 (381)
T ss_dssp STTTTSCTTCCEEEEEECCCCCTTCSSCC---------------------------------HHHHHHHHHHHHHEEEEE
T ss_pred chhhccccCCCeEEEEECCchhhcccccH---------------------------------HHHHHHHHHHHHhcCcCc
Confidence 33444455689999999999998544321 256678999999999999
Q ss_pred eEEEEeec
Q 017702 220 LMVLILAA 227 (367)
Q Consensus 220 ~lvl~~~g 227 (367)
+++++...
T Consensus 335 ~l~iv~n~ 342 (381)
T 3dmg_A 335 VFFLVSNP 342 (381)
T ss_dssp EEEEEECT
T ss_pred EEEEEEcC
Confidence 99998753
|
| >3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A* | Back alignment and structure |
|---|
Probab=98.08 E-value=1.9e-05 Score=68.40 Aligned_cols=25 Identities=12% Similarity=0.204 Sum_probs=19.7
Q ss_pred hHHHHHHHHHHhhccCceEEEEeec
Q 017702 203 DMESFLNARAEELVPGGLMVLILAA 227 (367)
Q Consensus 203 D~~~fL~~Ra~EL~pGG~lvl~~~g 227 (367)
+...+|+.-.+-|+|||+|++....
T Consensus 113 ~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 113 TTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred hHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 4445778888999999999998764
|
| >2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A* | Back alignment and structure |
|---|
Probab=98.07 E-value=4.9e-06 Score=77.01 Aligned_cols=98 Identities=19% Similarity=0.188 Sum_probs=59.0
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCcc--ccceeeccCcc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHA--RKYFAAGLPGS 140 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~--~~~f~~gvp~S 140 (367)
..+|+|+|||+|..++.+... . . +|+-.|....-....-++.... .--|.. ++
T Consensus 121 ~~~VLDiGcG~G~l~~~la~~-----------------g----~-~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~---~d 175 (254)
T 2nxc_A 121 GDKVLDLGTGSGVLAIAAEKL-----------------G----G-KALGVDIDPMVLPQAEANAKRNGVRPRFLE---GS 175 (254)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-----------------T----C-EEEEEESCGGGHHHHHHHHHHTTCCCEEEE---SC
T ss_pred CCEEEEecCCCcHHHHHHHHh-----------------C----C-eEEEEECCHHHHHHHHHHHHHcCCcEEEEE---CC
Confidence 469999999999988765410 1 2 5667776532222211111100 011222 22
Q ss_pred ccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCce
Q 017702 141 FHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGL 220 (367)
Q Consensus 141 Fy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~ 220 (367)
+.. .+|++++|+++++...|++ ..++..-.+-|+|||+
T Consensus 176 ~~~-~~~~~~fD~Vv~n~~~~~~-----------------------------------------~~~l~~~~~~LkpgG~ 213 (254)
T 2nxc_A 176 LEA-ALPFGPFDLLVANLYAELH-----------------------------------------AALAPRYREALVPGGR 213 (254)
T ss_dssp HHH-HGGGCCEEEEEEECCHHHH-----------------------------------------HHHHHHHHHHEEEEEE
T ss_pred hhh-cCcCCCCCEEEECCcHHHH-----------------------------------------HHHHHHHHHHcCCCCE
Confidence 222 2567899999997554442 2477777888999999
Q ss_pred EEEEeec
Q 017702 221 MVLILAA 227 (367)
Q Consensus 221 lvl~~~g 227 (367)
++++...
T Consensus 214 lils~~~ 220 (254)
T 2nxc_A 214 ALLTGIL 220 (254)
T ss_dssp EEEEEEE
T ss_pred EEEEeec
Confidence 9997665
|
| >3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405} | Back alignment and structure |
|---|
Probab=98.06 E-value=7.9e-06 Score=71.63 Aligned_cols=114 Identities=19% Similarity=0.228 Sum_probs=66.3
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc----cccceeeccC
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH----ARKYFAAGLP 138 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~----~~~~f~~gvp 138 (367)
..+|+|+|||+|..++.+.+.+ .| .-+++--|+...-....-+.+.. .+--|..+.
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~----------------~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d- 82 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLASLV----------------GE---NGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDG- 82 (197)
T ss_dssp TCEEEESCCTTSHHHHHHHHHH----------------CT---TCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSC-
T ss_pred CCEEEEcCCCCCHHHHHHHHHh----------------CC---CCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECC-
Confidence 4699999999999998877443 12 22677888764332222121111 122244443
Q ss_pred ccccccC-CCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 139 GSFHSRL-FPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 139 ~SFy~~l-~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
+.+-. ++++++|+++++..+ .|.. ++ .+. ..+ .|...+|+.-.+-|+|
T Consensus 83 --~~~~~~~~~~~fD~v~~~~~~-----~~~~--~~--------~~~---~~~-----------~~~~~~l~~~~~~Lk~ 131 (197)
T 3eey_A 83 --HQNMDKYIDCPVKAVMFNLGY-----LPSG--DH--------SIS---TRP-----------ETTIQALSKAMELLVT 131 (197)
T ss_dssp --GGGGGGTCCSCEEEEEEEESB-----CTTS--CT--------TCB---CCH-----------HHHHHHHHHHHHHEEE
T ss_pred --HHHHhhhccCCceEEEEcCCc-----ccCc--cc--------ccc---cCc-----------ccHHHHHHHHHHhCcC
Confidence 22221 456899999997655 2211 00 000 001 1445588888899999
Q ss_pred CceEEEEeec
Q 017702 218 GGLMVLILAA 227 (367)
Q Consensus 218 GG~lvl~~~g 227 (367)
||++++....
T Consensus 132 gG~l~~~~~~ 141 (197)
T 3eey_A 132 GGIITVVIYY 141 (197)
T ss_dssp EEEEEEEECC
T ss_pred CCEEEEEEcc
Confidence 9999998764
|
| >2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.05 E-value=1e-05 Score=71.22 Aligned_cols=119 Identities=18% Similarity=0.200 Sum_probs=72.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc-cccceeeccCcc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH-ARKYFAAGLPGS 140 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~-~~~~f~~gvp~S 140 (367)
...+|+|+|||+|..+..+.+. .+ . +++-.|....-....-+.... .+-.+..+.
T Consensus 42 ~~~~vLdiGcG~G~~~~~l~~~-----------------~~---~-~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d--- 97 (215)
T 2pxx_A 42 PEDRILVLGCGNSALSYELFLG-----------------GF---P-NVTSVDYSSVVVAAMQACYAHVPQLRWETMD--- 97 (215)
T ss_dssp TTCCEEEETCTTCSHHHHHHHT-----------------TC---C-CEEEEESCHHHHHHHHHHTTTCTTCEEEECC---
T ss_pred CCCeEEEECCCCcHHHHHHHHc-----------------CC---C-cEEEEeCCHHHHHHHHHhcccCCCcEEEEcc---
Confidence 3579999999999999877521 11 2 466666653322222222221 112233333
Q ss_pred ccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCce
Q 017702 141 FHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGL 220 (367)
Q Consensus 141 Fy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~ 220 (367)
+.+--++++++|+|+++.++|.+..... ..|.. . .....|...+|+.-.+-|+|||+
T Consensus 98 ~~~~~~~~~~fD~v~~~~~~~~~~~~~~-------~~~~~--------~--------~~~~~~~~~~l~~~~~~LkpgG~ 154 (215)
T 2pxx_A 98 VRKLDFPSASFDVVLEKGTLDALLAGER-------DPWTV--------S--------SEGVHTVDQVLSEVSRVLVPGGR 154 (215)
T ss_dssp TTSCCSCSSCEEEEEEESHHHHHTTTCS-------CTTSC--------C--------HHHHHHHHHHHHHHHHHEEEEEE
T ss_pred hhcCCCCCCcccEEEECcchhhhccccc-------ccccc--------c--------cchhHHHHHHHHHHHHhCcCCCE
Confidence 2222467789999999999987642211 11111 0 11234667899999999999999
Q ss_pred EEEEeec
Q 017702 221 MVLILAA 227 (367)
Q Consensus 221 lvl~~~g 227 (367)
+++..++
T Consensus 155 li~~~~~ 161 (215)
T 2pxx_A 155 FISMTSA 161 (215)
T ss_dssp EEEEESC
T ss_pred EEEEeCC
Confidence 9999987
|
| >1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4 | Back alignment and structure |
|---|
Probab=98.04 E-value=5.6e-06 Score=71.51 Aligned_cols=103 Identities=13% Similarity=0.103 Sum_probs=64.7
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC---Cccc--cceeec
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL---PHAR--KYFAAG 136 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l---~~~~--~~f~~g 136 (367)
...+|+|+|||+|..+..+... ..+++..|+...-....-+.+ .... -.+..+
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~----------------------~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 109 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADE----------------------VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHS 109 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGG----------------------SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEEC
T ss_pred CCCeEEEeCCCCCHHHHHHHHc----------------------CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEEC
Confidence 4579999999999998876521 114566665432211111111 1111 223333
Q ss_pred cCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhc
Q 017702 137 LPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELV 216 (367)
Q Consensus 137 vp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~ 216 (367)
. +.+ .++++++|+++++..+||- ..++..+|+.-.+-|+
T Consensus 110 d---~~~-~~~~~~~D~v~~~~~~~~~-------------------------------------~~~~~~~l~~~~~~L~ 148 (194)
T 1dus_A 110 D---LYE-NVKDRKYNKIITNPPIRAG-------------------------------------KEVLHRIIEEGKELLK 148 (194)
T ss_dssp S---TTT-TCTTSCEEEEEECCCSTTC-------------------------------------HHHHHHHHHHHHHHEE
T ss_pred c---hhc-ccccCCceEEEECCCcccc-------------------------------------hhHHHHHHHHHHHHcC
Confidence 2 222 3457899999998888871 1255678899999999
Q ss_pred cCceEEEEeec
Q 017702 217 PGGLMVLILAA 227 (367)
Q Consensus 217 pGG~lvl~~~g 227 (367)
|||++++....
T Consensus 149 ~gG~l~~~~~~ 159 (194)
T 1dus_A 149 DNGEIWVVIQT 159 (194)
T ss_dssp EEEEEEEEEES
T ss_pred CCCEEEEEECC
Confidence 99999999986
|
| >3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus} | Back alignment and structure |
|---|
Probab=98.03 E-value=1.6e-05 Score=75.57 Aligned_cols=149 Identities=19% Similarity=0.202 Sum_probs=84.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCccc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSF 141 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SF 141 (367)
...+|+|+|||||..|..+++. . .-+|+--|+..+.-..-.+.-+ +........-..
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~------------------g---a~~V~aVDvs~~mL~~a~r~~~--rv~~~~~~ni~~ 141 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQN------------------G---AKLVYAVDVGTNQLVWKLRQDD--RVRSMEQYNFRY 141 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT------------------T---CSEEEEECSSSSCSCHHHHTCT--TEEEECSCCGGG
T ss_pred cccEEEecCCCccHHHHHHHhC------------------C---CCEEEEEECCHHHHHHHHHhCc--ccceecccCcee
Confidence 4579999999999999877521 0 1167888887654332122111 000000000000
Q ss_pred c-ccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCce
Q 017702 142 H-SRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGL 220 (367)
Q Consensus 142 y-~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~ 220 (367)
. ..-+|..++|++++..++|||.. +|..-++-|+|||+
T Consensus 142 l~~~~l~~~~fD~v~~d~sf~sl~~-----------------------------------------vL~e~~rvLkpGG~ 180 (291)
T 3hp7_A 142 AEPVDFTEGLPSFASIDVSFISLNL-----------------------------------------ILPALAKILVDGGQ 180 (291)
T ss_dssp CCGGGCTTCCCSEEEECCSSSCGGG-----------------------------------------THHHHHHHSCTTCE
T ss_pred cchhhCCCCCCCEEEEEeeHhhHHH-----------------------------------------HHHHHHHHcCcCCE
Confidence 0 11246667999999999998632 56777788999999
Q ss_pred EEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEEec
Q 017702 221 MVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLSQ 300 (367)
Q Consensus 221 lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~~~ 300 (367)
|++..- +.-.. .... +-..|++.... .+..+.+++.++++..| |.+..+.....
T Consensus 181 lv~lvk---Pqfe~-~~~~--------------~~~~G~vrd~~-------~~~~~~~~v~~~~~~~G-f~v~~~~~spi 234 (291)
T 3hp7_A 181 VVALVK---PQFEA-GREQ--------------IGKNGIVRESS-------IHEKVLETVTAFAVDYG-FSVKGLDFSPI 234 (291)
T ss_dssp EEEEEC---GGGTS-CGGG--------------CC-CCCCCCHH-------HHHHHHHHHHHHHHHTT-EEEEEEEECSS
T ss_pred EEEEEC---ccccc-Chhh--------------cCCCCccCCHH-------HHHHHHHHHHHHHHHCC-CEEEEEEECCC
Confidence 999732 11000 0000 00124332111 12346789999999997 99988766433
|
| >3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=98.02 E-value=9.4e-06 Score=79.57 Aligned_cols=104 Identities=16% Similarity=0.220 Sum_probs=66.3
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC-Cc----cccceee
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL-PH----ARKYFAA 135 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l-~~----~~~~f~~ 135 (367)
.+..+|+|+|||+|..++.+.+. .. . +|+.-|.. +- -...+.. .. .+-.|..
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~-----------------g~---~-~V~gvD~s-~~-~~~a~~~~~~~~~~~~v~~~~ 118 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQA-----------------GA---R-KVYAVEAT-KM-ADHARALVKANNLDHIVEVIE 118 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHT-----------------TC---S-EEEEEESS-TT-HHHHHHHHHHTTCTTTEEEEE
T ss_pred CCCCEEEEeccCcCHHHHHHHhc-----------------CC---C-EEEEEccH-HH-HHHHHHHHHHcCCCCeEEEEE
Confidence 34579999999999998876521 01 2 67787875 32 2222221 11 1123444
Q ss_pred ccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhh
Q 017702 136 GLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEEL 215 (367)
Q Consensus 136 gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL 215 (367)
+. ..+-.+| +++|+|+|....|++...+ ++..+|+.+.+-|
T Consensus 119 ~d---~~~~~~~-~~~D~Iv~~~~~~~l~~e~-----------------------------------~~~~~l~~~~~~L 159 (376)
T 3r0q_C 119 GS---VEDISLP-EKVDVIISEWMGYFLLRES-----------------------------------MFDSVISARDRWL 159 (376)
T ss_dssp SC---GGGCCCS-SCEEEEEECCCBTTBTTTC-----------------------------------THHHHHHHHHHHE
T ss_pred Cc---hhhcCcC-CcceEEEEcChhhcccchH-----------------------------------HHHHHHHHHHhhC
Confidence 43 2222334 8999999977777765321 4667999999999
Q ss_pred ccCceEEEEee
Q 017702 216 VPGGLMVLILA 226 (367)
Q Consensus 216 ~pGG~lvl~~~ 226 (367)
+|||+|++...
T Consensus 160 kpgG~li~~~~ 170 (376)
T 3r0q_C 160 KPTGVMYPSHA 170 (376)
T ss_dssp EEEEEEESSEE
T ss_pred CCCeEEEEecC
Confidence 99999976544
|
| >3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.02 E-value=1.8e-05 Score=70.04 Aligned_cols=79 Identities=10% Similarity=0.006 Sum_probs=45.5
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC---Cccccceeecc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL---PHARKYFAAGL 137 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l---~~~~~~f~~gv 137 (367)
.+..+|+|+|||+|..+..+.+.. .+|+--|....-....-+.+ ...+-.|..+
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~~----------------------~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~- 132 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHLV----------------------QHVCSVERIKGLQWQARRRLKNLDLHNVSTRHG- 132 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS----------------------SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES-
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhC----------------------CEEEEEecCHHHHHHHHHHHHHcCCCceEEEEC-
Confidence 345799999999999998776320 13555565432211111111 1111123333
Q ss_pred CccccccCCCCCceeEEEecccccccc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLS 164 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs 164 (367)
+..+.+.+.+++|++++..++||+.
T Consensus 133 --d~~~~~~~~~~~D~i~~~~~~~~~~ 157 (210)
T 3lbf_A 133 --DGWQGWQARAPFDAIIVTAAPPEIP 157 (210)
T ss_dssp --CGGGCCGGGCCEEEEEESSBCSSCC
T ss_pred --CcccCCccCCCccEEEEccchhhhh
Confidence 2344444568999999999998843
|
| >2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A* | Back alignment and structure |
|---|
Probab=98.00 E-value=4.1e-05 Score=73.93 Aligned_cols=100 Identities=18% Similarity=0.234 Sum_probs=60.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhc-C---Cc-cccceeec
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKS-L---PH-ARKYFAAG 136 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~-l---~~-~~~~f~~g 136 (367)
+..+|+|+|||+|..++.+.+. + .-+|+--|... .-...+. + .- .+-.+..+
T Consensus 64 ~~~~VLDiGcGtG~ls~~la~~------------------g---~~~v~gvD~s~--~~~~a~~~~~~~~~~~~i~~~~~ 120 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFAAKA------------------G---AKKVLGVDQSE--ILYQAMDIIRLNKLEDTITLIKG 120 (340)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT------------------T---CSEEEEEESST--HHHHHHHHHHHTTCTTTEEEEES
T ss_pred CCCEEEEeeccCcHHHHHHHHc------------------C---CCEEEEEChHH--HHHHHHHHHHHcCCCCcEEEEEe
Confidence 3469999999999988766521 0 12577777652 2222221 1 10 12223333
Q ss_pred cCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhc
Q 017702 137 LPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELV 216 (367)
Q Consensus 137 vp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~ 216 (367)
. ..+--+|++++|+++|....+-+... .++..+|..+.+-|+
T Consensus 121 d---~~~~~~~~~~~D~Ivs~~~~~~l~~~-----------------------------------~~~~~~l~~~~~~Lk 162 (340)
T 2fyt_A 121 K---IEEVHLPVEKVDVIISEWMGYFLLFE-----------------------------------SMLDSVLYAKNKYLA 162 (340)
T ss_dssp C---TTTSCCSCSCEEEEEECCCBTTBTTT-----------------------------------CHHHHHHHHHHHHEE
T ss_pred e---HHHhcCCCCcEEEEEEcCchhhccCH-----------------------------------HHHHHHHHHHHhhcC
Confidence 3 33334677899999996522211111 256679999999999
Q ss_pred cCceEE
Q 017702 217 PGGLMV 222 (367)
Q Consensus 217 pGG~lv 222 (367)
|||+++
T Consensus 163 pgG~li 168 (340)
T 2fyt_A 163 KGGSVY 168 (340)
T ss_dssp EEEEEE
T ss_pred CCcEEE
Confidence 999998
|
| >3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=97.99 E-value=2.5e-05 Score=69.00 Aligned_cols=102 Identities=14% Similarity=0.117 Sum_probs=61.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC---CccccceeeccC
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL---PHARKYFAAGLP 138 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l---~~~~~~f~~gvp 138 (367)
...+|+|+|||+|..++.+.+.. | ..+++..|....-....-+.+ ...+-.+..+
T Consensus 40 ~~~~vLDiG~G~G~~~~~la~~~-----------------~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~-- 97 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIEASNLM-----------------P---NGRIFALERNPQYLGFIRDNLKKFVARNVTLVEA-- 97 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHC-----------------T---TSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEEC--
T ss_pred CCCEEEEECCCCCHHHHHHHHHC-----------------C---CCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeC--
Confidence 45799999999999998776321 1 235777777532211111111 1111112222
Q ss_pred ccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccC
Q 017702 139 GSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPG 218 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 218 (367)
++.+.+.+..++|++++..+++ +...+|+.-.+-|+||
T Consensus 98 -d~~~~~~~~~~~D~i~~~~~~~-----------------------------------------~~~~~l~~~~~~Lkpg 135 (204)
T 3e05_A 98 -FAPEGLDDLPDPDRVFIGGSGG-----------------------------------------MLEEIIDAVDRRLKSE 135 (204)
T ss_dssp -CTTTTCTTSCCCSEEEESCCTT-----------------------------------------CHHHHHHHHHHHCCTT
T ss_pred -ChhhhhhcCCCCCEEEECCCCc-----------------------------------------CHHHHHHHHHHhcCCC
Confidence 2333333346789998865543 2335888888999999
Q ss_pred ceEEEEeec
Q 017702 219 GLMVLILAA 227 (367)
Q Consensus 219 G~lvl~~~g 227 (367)
|++++....
T Consensus 136 G~l~~~~~~ 144 (204)
T 3e05_A 136 GVIVLNAVT 144 (204)
T ss_dssp CEEEEEECB
T ss_pred eEEEEEecc
Confidence 999998765
|
| >4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.98 E-value=1.8e-05 Score=77.90 Aligned_cols=132 Identities=17% Similarity=0.234 Sum_probs=72.3
Q ss_pred chHHHhhHHHHHHHHHH-HHHHHHHHHhhhcccccCCCCCCCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCC
Q 017702 22 YSYANNSTYQRGVVDAA-KELISEAIADKLDLKILGFDDTLKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQ 100 (367)
Q Consensus 22 ~sY~~nS~~Q~~~~~~~-~~ll~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~ 100 (367)
.||+..+..+.-+-+.. ....++||.++... -+--+|+|+|||+|.+|+.+++. +
T Consensus 50 ~sY~~~~iH~~ML~D~~Rt~aY~~Ai~~~~~~--------~~~k~VLDvG~GtGiLs~~Aa~a------------G---- 105 (376)
T 4hc4_A 50 ECYSDVSVHEEMIADRVRTDAYRLGILRNWAA--------LRGKTVLDVGAGTGILSIFCAQA------------G---- 105 (376)
T ss_dssp CCHHHHHHHHHHHHCHHHHHHHHHHHHTTHHH--------HTTCEEEEETCTTSHHHHHHHHT------------T----
T ss_pred hhccCcHHHHHHhCCHHHHHHHHHHHHhCHHh--------cCCCEEEEeCCCccHHHHHHHHh------------C----
Confidence 38887766554444333 23345566543221 12247999999999888766521 1
Q ss_pred CCCcceeEEEEcCCCccchHHHhhcCC-----ccccceeeccCccccccCCCCCceeEEEeccccccccCCCccccCCCC
Q 017702 101 KPSALEFQVFLNDHSDNDFNTLFKSLP-----HARKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCS 175 (367)
Q Consensus 101 ~p~~~e~~v~~nDlp~NDFn~lf~~l~-----~~~~~f~~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~ 175 (367)
+ . .||--|.. +.-...+.+- ..+-.++.|. .+.+-.+..+|+++|- |+...-.
T Consensus 106 -A---~-~V~ave~s--~~~~~a~~~~~~n~~~~~i~~i~~~----~~~~~lpe~~DvivsE----~~~~~l~------- 163 (376)
T 4hc4_A 106 -A---R-RVYAVEAS--AIWQQAREVVRFNGLEDRVHVLPGP----VETVELPEQVDAIVSE----WMGYGLL------- 163 (376)
T ss_dssp -C---S-EEEEEECS--TTHHHHHHHHHHTTCTTTEEEEESC----TTTCCCSSCEEEEECC----CCBTTBT-------
T ss_pred -C---C-EEEEEeCh--HHHHHHHHHHHHcCCCceEEEEeee----eeeecCCccccEEEee----ccccccc-------
Confidence 1 1 46666643 1112222211 1112233333 2344455889999993 3321110
Q ss_pred CCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEEE
Q 017702 176 PAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVL 223 (367)
Q Consensus 176 ~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl 223 (367)
+ +..+..+|.+|.+-|+|||+++-
T Consensus 164 ---~---------------------e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 164 ---H---------------------ESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp ---T---------------------TCSHHHHHHHHHHHEEEEEEEES
T ss_pred ---c---------------------cchhhhHHHHHHhhCCCCceECC
Confidence 0 12456799999999999999874
|
| >1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20 | Back alignment and structure |
|---|
Probab=97.97 E-value=2.5e-05 Score=71.14 Aligned_cols=99 Identities=17% Similarity=0.158 Sum_probs=59.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHH---hhcCCccccceeeccC
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTL---FKSLPHARKYFAAGLP 138 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~l---f~~l~~~~~~f~~gvp 138 (367)
+..+|+|+|||+|..++.+... .| ..+|+.-|....--..+ ++.....+--|..+
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~-----------------~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~-- 127 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKIC-----------------FP---HLHVTIVDSLNKRITFLEKLSEALQLENTTFCHD-- 127 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHH-----------------CT---TCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEES--
T ss_pred CCCEEEEecCCCCHHHHHHHHh-----------------CC---CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEec--
Confidence 4579999999999999987621 12 23677777753211111 11111111223333
Q ss_pred ccccccCCC---CCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhh
Q 017702 139 GSFHSRLFP---RSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEEL 215 (367)
Q Consensus 139 ~SFy~~l~P---~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL 215 (367)
++.+-.++ ++++|+++|... + |+..+|+...+-|
T Consensus 128 -d~~~~~~~~~~~~~fD~V~~~~~-------~-----------------------------------~~~~~l~~~~~~L 164 (240)
T 1xdz_A 128 -RAETFGQRKDVRESYDIVTARAV-------A-----------------------------------RLSVLSELCLPLV 164 (240)
T ss_dssp -CHHHHTTCTTTTTCEEEEEEECC-------S-----------------------------------CHHHHHHHHGGGE
T ss_pred -cHHHhcccccccCCccEEEEecc-------C-----------------------------------CHHHHHHHHHHhc
Confidence 23222222 579999998441 1 3456888889999
Q ss_pred ccCceEEEEe
Q 017702 216 VPGGLMVLIL 225 (367)
Q Consensus 216 ~pGG~lvl~~ 225 (367)
+|||++++..
T Consensus 165 kpgG~l~~~~ 174 (240)
T 1xdz_A 165 KKNGLFVALK 174 (240)
T ss_dssp EEEEEEEEEE
T ss_pred CCCCEEEEEe
Confidence 9999998864
|
| >1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3 | Back alignment and structure |
|---|
Probab=97.96 E-value=2.7e-05 Score=70.01 Aligned_cols=104 Identities=13% Similarity=0.028 Sum_probs=59.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccc---hHHHhhcCCccccceeeccC
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDND---FNTLFKSLPHARKYFAAGLP 138 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~ND---Fn~lf~~l~~~~~~f~~gvp 138 (367)
+..+|+|+|||+|..|..+.+.+ . .-+|+--|+...- .....+... +-.+..+..
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~~--------~------------~~~V~gvD~s~~~l~~~~~~a~~~~--~v~~~~~d~ 114 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADIV--------D------------EGIIYAVEYSAKPFEKLLELVRERN--NIIPLLFDA 114 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHT--------T------------TSEEEEECCCHHHHHHHHHHHHHCS--SEEEECSCT
T ss_pred CCCEEEEECCcCCHHHHHHHHHc--------C------------CCEEEEEECCHHHHHHHHHHHhcCC--CeEEEEcCC
Confidence 44699999999999988776332 1 1157777775421 112222211 122333322
Q ss_pred ccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccC
Q 017702 139 GSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPG 218 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 218 (367)
........+.+++|+++|+.+- | .+...+|+.-++-||||
T Consensus 115 ~~~~~~~~~~~~fD~V~~~~~~------~----------------------------------~~~~~~l~~~~r~Lkpg 154 (210)
T 1nt2_A 115 SKPWKYSGIVEKVDLIYQDIAQ------K----------------------------------NQIEILKANAEFFLKEK 154 (210)
T ss_dssp TCGGGTTTTCCCEEEEEECCCS------T----------------------------------THHHHHHHHHHHHEEEE
T ss_pred CCchhhcccccceeEEEEeccC------h----------------------------------hHHHHHHHHHHHHhCCC
Confidence 1111102234899999996211 1 02234677788899999
Q ss_pred ceEEEEeec
Q 017702 219 GLMVLILAA 227 (367)
Q Consensus 219 G~lvl~~~g 227 (367)
|+|++.+..
T Consensus 155 G~l~i~~~~ 163 (210)
T 1nt2_A 155 GEVVIMVKA 163 (210)
T ss_dssp EEEEEEEEH
T ss_pred CEEEEEEec
Confidence 999999754
|
| >3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=97.95 E-value=2.1e-05 Score=70.83 Aligned_cols=69 Identities=12% Similarity=0.079 Sum_probs=39.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCccc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSF 141 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SF 141 (367)
...+|+|+|||+|..+..+.+. ..+|+-.|+...-....-+..+ +-.|..+. +
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~----------------------~~~v~~vD~s~~~~~~a~~~~~--~~~~~~~d---~ 100 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQ----------------------AARWAAYDFSPELLKLARANAP--HADVYEWN---G 100 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGG----------------------SSEEEEEESCHHHHHHHHHHCT--TSEEEECC---S
T ss_pred CCCeEEEeCCCCCHHHHHHHHc----------------------CCEEEEEECCHHHHHHHHHhCC--CceEEEcc---h
Confidence 3479999999999988877521 1256677765322211111111 12233333 2
Q ss_pred cccC-CC-CCceeEEEec
Q 017702 142 HSRL-FP-RSSIHFVHTS 157 (367)
Q Consensus 142 y~~l-~P-~~svd~~~S~ 157 (367)
.+.+ ++ ++++|+|+|+
T Consensus 101 ~~~~~~~~~~~fD~v~~~ 118 (226)
T 3m33_A 101 KGELPAGLGAPFGLIVSR 118 (226)
T ss_dssp CSSCCTTCCCCEEEEEEE
T ss_pred hhccCCcCCCCEEEEEeC
Confidence 2222 45 7899999996
|
| >1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A* | Back alignment and structure |
|---|
Probab=97.95 E-value=1.8e-05 Score=71.78 Aligned_cols=108 Identities=15% Similarity=0.203 Sum_probs=64.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc--cccceeeccCc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH--ARKYFAAGLPG 139 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~--~~~~f~~gvp~ 139 (367)
...+|+|+|||+|..+..+... .+ . +|+--|+..+-....-+.... .+-.|..+.
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~-----------------~~---~-~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d-- 116 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEA-----------------PI---D-EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGL-- 116 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTS-----------------CE---E-EEEEEECCHHHHHHHHHHGGGCSSEEEEEESC--
T ss_pred CCCeEEEEeccCCHHHHHHHhc-----------------CC---C-eEEEEcCCHHHHHHHHHHHHhcCCCeEEEecC--
Confidence 3579999999999988876410 12 2 677777764322221111111 112233333
Q ss_pred ccccc--CCCCCceeEEEe-ccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhc
Q 017702 140 SFHSR--LFPRSSIHFVHT-SYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELV 216 (367)
Q Consensus 140 SFy~~--l~P~~svd~~~S-~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~ 216 (367)
+.+. -+|++++|+|++ .+++++ .... ..++..+|+.-++-||
T Consensus 117 -~~~~~~~~~~~~fD~V~~d~~~~~~-~~~~---------------------------------~~~~~~~l~~~~r~Lk 161 (236)
T 1zx0_A 117 -WEDVAPTLPDGHFDGILYDTYPLSE-ETWH---------------------------------THQFNFIKNHAFRLLK 161 (236)
T ss_dssp -HHHHGGGSCTTCEEEEEECCCCCBG-GGTT---------------------------------THHHHHHHHTHHHHEE
T ss_pred -HHHhhcccCCCceEEEEECCcccch-hhhh---------------------------------hhhHHHHHHHHHHhcC
Confidence 3332 367899999999 666522 2111 1245568888899999
Q ss_pred cCceEEEEeec
Q 017702 217 PGGLMVLILAA 227 (367)
Q Consensus 217 pGG~lvl~~~g 227 (367)
|||+|++....
T Consensus 162 pgG~l~~~~~~ 172 (236)
T 1zx0_A 162 PGGVLTYCNLT 172 (236)
T ss_dssp EEEEEEECCHH
T ss_pred CCeEEEEEecC
Confidence 99999876554
|
| >3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.93 E-value=3.7e-05 Score=70.41 Aligned_cols=117 Identities=15% Similarity=0.101 Sum_probs=64.3
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHH---HhhcC-----Cc-ccc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNT---LFKSL-----PH-ARK 131 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~---lf~~l-----~~-~~~ 131 (367)
.+..+|+|+|||+|..++.+... .| ...++--|....--.. ..+.+ .. .+-
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~-----------------~p---~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv 104 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPL-----------------FP---DTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNI 104 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGG-----------------ST---TSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTE
T ss_pred CCCCeEEEEccCCcHHHHHHHHH-----------------CC---CCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 34579999999999999877521 12 3356666654321110 01110 01 112
Q ss_pred ceeeccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHH
Q 017702 132 YFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNAR 211 (367)
Q Consensus 132 ~f~~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~R 211 (367)
.|+.+.-..+....+|++++|.+++.+.-.|..+... |.++ ....||+.-
T Consensus 105 ~~~~~d~~~~l~~~~~~~~~D~v~~~~~dp~~k~~h~-----------krr~-------------------~~~~~l~~~ 154 (235)
T 3ckk_A 105 ACLRSNAMKHLPNFFYKGQLTKMFFLFPDPHFKRTKH-----------KWRI-------------------ISPTLLAEY 154 (235)
T ss_dssp EEEECCTTTCHHHHCCTTCEEEEEEESCC----------------------C-------------------CCHHHHHHH
T ss_pred EEEECcHHHhhhhhCCCcCeeEEEEeCCCchhhhhhh-----------hhhh-------------------hhHHHHHHH
Confidence 2444443333334578899999998877777432100 0000 113588888
Q ss_pred HHhhccCceEEEEeec
Q 017702 212 AEELVPGGLMVLILAA 227 (367)
Q Consensus 212 a~EL~pGG~lvl~~~g 227 (367)
++-|+|||+|++.+..
T Consensus 155 ~~~LkpGG~l~~~td~ 170 (235)
T 3ckk_A 155 AYVLRVGGLVYTITDV 170 (235)
T ss_dssp HHHEEEEEEEEEEESC
T ss_pred HHHCCCCCEEEEEeCC
Confidence 9999999999988743
|
| >3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=97.93 E-value=3.1e-05 Score=69.52 Aligned_cols=125 Identities=12% Similarity=0.081 Sum_probs=65.0
Q ss_pred CCceEEeeecCC-CCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc--cccceeecc
Q 017702 61 LKPFKIADLGCS-VGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH--ARKYFAAGL 137 (367)
Q Consensus 61 ~~~~~IaD~GCs-~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~--~~~~f~~gv 137 (367)
.+..+|+|+||| +|..++.+.... ..+|+..|....-....-+.+.. .+-.+..+.
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~---------------------~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d 112 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFF---------------------NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSN 112 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHH---------------------CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECS
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhc---------------------CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCC
Confidence 345799999999 999998776432 01466666643222111111110 012233333
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
... . .-+|++++|+|+++-.++|...... .+. ..++..+. . ...+...+|+.-.+-|+|
T Consensus 113 ~~~-~-~~~~~~~fD~I~~npp~~~~~~~~~--~~~-~~~~~~~~-----~-----------~~~~~~~~l~~~~~~Lkp 171 (230)
T 3evz_A 113 GGI-I-KGVVEGTFDVIFSAPPYYDKPLGRV--LTE-REAIGGGK-----Y-----------GEEFSVKLLEEAFDHLNP 171 (230)
T ss_dssp SCS-S-TTTCCSCEEEEEECCCCC------------------CCS-----S-----------SCHHHHHHHHHHGGGEEE
T ss_pred chh-h-hhcccCceeEEEECCCCcCCccccc--cCh-hhhhccCc-----c-----------chHHHHHHHHHHHHHhCC
Confidence 111 1 1235689999999888877554111 000 00111000 0 012345688888899999
Q ss_pred CceEEEEeec
Q 017702 218 GGLMVLILAA 227 (367)
Q Consensus 218 GG~lvl~~~g 227 (367)
||++++.+..
T Consensus 172 gG~l~~~~~~ 181 (230)
T 3evz_A 172 GGKVALYLPD 181 (230)
T ss_dssp EEEEEEEEES
T ss_pred CeEEEEEecc
Confidence 9999998764
|
| >2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.91 E-value=1.3e-05 Score=71.21 Aligned_cols=80 Identities=11% Similarity=0.034 Sum_probs=45.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC---CccccceeeccC
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL---PHARKYFAAGLP 138 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l---~~~~~~f~~gvp 138 (367)
...+|+|+|||+|..+..+.... .| ..+|+..|...+-....-+.+ ...+-.|..+
T Consensus 77 ~~~~vLdiG~G~G~~~~~l~~~~----------------~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~-- 135 (215)
T 2yxe_A 77 PGMKVLEIGTGCGYHAAVTAEIV----------------GE---DGLVVSIERIPELAEKAERTLRKLGYDNVIVIVG-- 135 (215)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH----------------CT---TSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEES--
T ss_pred CCCEEEEECCCccHHHHHHHHHh----------------CC---CCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEEC--
Confidence 34699999999999998876432 11 225677676532211111111 1011123333
Q ss_pred ccccccCCCCCceeEEEeccccccc
Q 017702 139 GSFHSRLFPRSSIHFVHTSYALHWL 163 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~~alhWL 163 (367)
.+...+.+.+++|+++++.++|++
T Consensus 136 -d~~~~~~~~~~fD~v~~~~~~~~~ 159 (215)
T 2yxe_A 136 -DGTLGYEPLAPYDRIYTTAAGPKI 159 (215)
T ss_dssp -CGGGCCGGGCCEEEEEESSBBSSC
T ss_pred -CcccCCCCCCCeeEEEECCchHHH
Confidence 232222236789999999999974
|
| >3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=2.7e-05 Score=71.10 Aligned_cols=23 Identities=22% Similarity=0.303 Sum_probs=19.3
Q ss_pred hHHHHHHHHHHhhccCceEEEEe
Q 017702 203 DMESFLNARAEELVPGGLMVLIL 225 (367)
Q Consensus 203 D~~~fL~~Ra~EL~pGG~lvl~~ 225 (367)
|...||+.-++-|||||+|++..
T Consensus 148 ~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 148 QFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp HHHHHHHTHHHHEEEEEEEEECC
T ss_pred chhhhhhhhhheeCCCCEEEEEe
Confidence 66778998999999999987644
|
| >3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=3.3e-05 Score=70.24 Aligned_cols=71 Identities=13% Similarity=0.167 Sum_probs=40.5
Q ss_pred hHHHHHHHHHHhhccCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHH
Q 017702 203 DMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEA 282 (367)
Q Consensus 203 D~~~fL~~Ra~EL~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~ 282 (367)
+...+|+.-++-|||||+|++.... ... . +.+...++ +. ....|.|++. +|+.+
T Consensus 117 ~~~~~l~~~~r~LkpGG~l~i~~~~-~~~-~-----------~~~~~~~~-----~~-------~~~~~~~~~~-~el~~ 170 (225)
T 3p2e_A 117 PNRDILSNVADLAKKEAHFEFVTTY-SDS-Y-----------EEAEIKKR-----GL-------PLLSKAYFLS-EQYKA 170 (225)
T ss_dssp TCHHHHHHHHTTEEEEEEEEEEECC-CC--------------------------------------CCHHHHHS-HHHHH
T ss_pred chHHHHHHHHHhcCCCcEEEEEEec-ccc-c-----------hhchhhhc-----CC-------CCCChhhcch-HHHHH
Confidence 3346888889999999999995433 111 1 10000000 10 0011223332 46999
Q ss_pred HHHhCCceEEeEEEEEec
Q 017702 283 IIRTNGNFTIEKMEKLSQ 300 (367)
Q Consensus 283 ~l~~~g~F~I~~lE~~~~ 300 (367)
.+++.| |+|...+.+..
T Consensus 171 ~l~~aG-f~v~~~~~~~~ 187 (225)
T 3p2e_A 171 ELSNSG-FRIDDVKELDN 187 (225)
T ss_dssp HHHHHT-CEEEEEEEECH
T ss_pred HHHHcC-CCeeeeeecCH
Confidence 999987 99999988863
|
| >3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C* | Back alignment and structure |
|---|
Probab=97.89 E-value=5.6e-05 Score=69.00 Aligned_cols=100 Identities=17% Similarity=0.220 Sum_probs=62.7
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC---Cccc-cceeecc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL---PHAR-KYFAAGL 137 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l---~~~~-~~f~~gv 137 (367)
...+|+|+|||+|..+..+.+.+ .| ..+++..|+...-....-+.+ .-.. -.+..+
T Consensus 93 ~~~~vldiG~G~G~~~~~l~~~~----------------~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~- 152 (255)
T 3mb5_A 93 PGDFIVEAGVGSGALTLFLANIV----------------GP---EGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLK- 152 (255)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH----------------CT---TSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECS-
T ss_pred CCCEEEEecCCchHHHHHHHHHh----------------CC---CeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEEC-
Confidence 45799999999999999887443 12 236788888642222211111 1111 223333
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
++. ..+|++++|++++. .|.. ..+|+.-.+-|+|
T Consensus 153 --d~~-~~~~~~~~D~v~~~--------~~~~-----------------------------------~~~l~~~~~~L~~ 186 (255)
T 3mb5_A 153 --DIY-EGIEEENVDHVILD--------LPQP-----------------------------------ERVVEHAAKALKP 186 (255)
T ss_dssp --CGG-GCCCCCSEEEEEEC--------SSCG-----------------------------------GGGHHHHHHHEEE
T ss_pred --chh-hccCCCCcCEEEEC--------CCCH-----------------------------------HHHHHHHHHHcCC
Confidence 333 44788999999983 2211 1367788899999
Q ss_pred CceEEEEeec
Q 017702 218 GGLMVLILAA 227 (367)
Q Consensus 218 GG~lvl~~~g 227 (367)
||++++....
T Consensus 187 gG~l~~~~~~ 196 (255)
T 3mb5_A 187 GGFFVAYTPC 196 (255)
T ss_dssp EEEEEEEESS
T ss_pred CCEEEEEECC
Confidence 9999988765
|
| >2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.87 E-value=3e-05 Score=70.09 Aligned_cols=105 Identities=17% Similarity=0.140 Sum_probs=62.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCcc---chHHHhhcCCccccceeeccC
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDN---DFNTLFKSLPHARKYFAAGLP 138 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~N---DFn~lf~~l~~~~~~f~~gvp 138 (367)
...+|+|+|||+|..+..+.+.. .| .-+|+--|+... +.....+.. .+-.|..+.-
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~----------------g~---~~~v~gvD~s~~~i~~~~~~a~~~--~~v~~~~~d~ 135 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIV----------------GP---DGLVYAVEFSHRSGRDLINLAKKR--TNIIPVIEDA 135 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH----------------CT---TCEEEEECCCHHHHHHHHHHHHHC--TTEEEECSCT
T ss_pred CCCEEEEEcccCCHHHHHHHHHh----------------CC---CcEEEEEECCHHHHHHHHHHhhcc--CCeEEEEccc
Confidence 35799999999999999887443 11 225777787642 222222221 1222444432
Q ss_pred ccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccC
Q 017702 139 GSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPG 218 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 218 (367)
......-++.+++|++++..+ .|. ....++..-.+-|+||
T Consensus 136 ~~~~~~~~~~~~~D~V~~~~~------~~~----------------------------------~~~~~~~~~~~~Lkpg 175 (233)
T 2ipx_A 136 RHPHKYRMLIAMVDVIFADVA------QPD----------------------------------QTRIVALNAHTFLRNG 175 (233)
T ss_dssp TCGGGGGGGCCCEEEEEECCC------CTT----------------------------------HHHHHHHHHHHHEEEE
T ss_pred CChhhhcccCCcEEEEEEcCC------Ccc----------------------------------HHHHHHHHHHHHcCCC
Confidence 221111235689999999433 110 2234677778899999
Q ss_pred ceEEEEeec
Q 017702 219 GLMVLILAA 227 (367)
Q Consensus 219 G~lvl~~~g 227 (367)
|++++.+..
T Consensus 176 G~l~i~~~~ 184 (233)
T 2ipx_A 176 GHFVISIKA 184 (233)
T ss_dssp EEEEEEEEH
T ss_pred eEEEEEEcc
Confidence 999997764
|
| >1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A | Back alignment and structure |
|---|
Probab=97.87 E-value=9.7e-05 Score=66.71 Aligned_cols=104 Identities=14% Similarity=0.136 Sum_probs=59.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc-cccceeeccCcc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH-ARKYFAAGLPGS 140 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~-~~~~f~~gvp~S 140 (367)
...+|+|+|||+|..+..+.+.. . .-+|+--|....-...+-+.... .+-.|..+....
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~--------~------------~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~ 133 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIA--------D------------KGIVYAIEYAPRIMRELLDACAERENIIPILGDANK 133 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHT--------T------------TSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTC
T ss_pred CCCEEEEEcccCCHHHHHHHHHc--------C------------CcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCC
Confidence 45799999999999998876432 0 11466666654222222122211 122344443222
Q ss_pred ccc-cCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 141 FHS-RLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 141 Fy~-~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
... ..++ +++|+++ |++.+ | .....+|+.-.+-|+|||
T Consensus 134 ~~~~~~~~-~~~D~v~-----~~~~~-~----------------------------------~~~~~~l~~~~~~LkpgG 172 (230)
T 1fbn_A 134 PQEYANIV-EKVDVIY-----EDVAQ-P----------------------------------NQAEILIKNAKWFLKKGG 172 (230)
T ss_dssp GGGGTTTS-CCEEEEE-----ECCCS-T----------------------------------THHHHHHHHHHHHEEEEE
T ss_pred cccccccC-ccEEEEE-----EecCC-h----------------------------------hHHHHHHHHHHHhCCCCc
Confidence 111 2234 7899998 43221 1 022357888888999999
Q ss_pred eEEEEee
Q 017702 220 LMVLILA 226 (367)
Q Consensus 220 ~lvl~~~ 226 (367)
++++.+.
T Consensus 173 ~l~i~~~ 179 (230)
T 1fbn_A 173 YGMIAIK 179 (230)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 9999844
|
| >1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6 | Back alignment and structure |
|---|
Probab=97.86 E-value=5.8e-05 Score=72.41 Aligned_cols=100 Identities=22% Similarity=0.301 Sum_probs=60.4
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC-Cc----cccceeecc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL-PH----ARKYFAAGL 137 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l-~~----~~~~f~~gv 137 (367)
..+|+|+|||+|..++.+.+. + .-+|+--|.. . .-...+.. .. .+--+..+.
T Consensus 39 ~~~VLDiGcGtG~ls~~la~~------------------g---~~~v~~vD~s-~-~~~~a~~~~~~~~~~~~i~~~~~d 95 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAAKH------------------G---AKHVIGVDMS-S-IIEMAKELVELNGFSDKITLLRGK 95 (328)
T ss_dssp TCEEEEETCTTSHHHHHHHHT------------------C---CSEEEEEESS-T-HHHHHHHHHHHTTCTTTEEEEESC
T ss_pred CCEEEEecCccHHHHHHHHHC------------------C---CCEEEEEChH-H-HHHHHHHHHHHcCCCCCEEEEECc
Confidence 369999999999988766511 1 1257777775 2 22222221 10 112233333
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
+.+--+|.+++|+++|....+.+... .++..+|..+.+-|+|
T Consensus 96 ---~~~~~~~~~~~D~Ivs~~~~~~l~~~-----------------------------------~~~~~~l~~~~~~Lkp 137 (328)
T 1g6q_1 96 ---LEDVHLPFPKVDIIISEWMGYFLLYE-----------------------------------SMMDTVLYARDHYLVE 137 (328)
T ss_dssp ---TTTSCCSSSCEEEEEECCCBTTBSTT-----------------------------------CCHHHHHHHHHHHEEE
T ss_pred ---hhhccCCCCcccEEEEeCchhhcccH-----------------------------------HHHHHHHHHHHhhcCC
Confidence 33333567899999997544433211 1455789999999999
Q ss_pred CceEEE
Q 017702 218 GGLMVL 223 (367)
Q Consensus 218 GG~lvl 223 (367)
||+++.
T Consensus 138 gG~li~ 143 (328)
T 1g6q_1 138 GGLIFP 143 (328)
T ss_dssp EEEEES
T ss_pred CeEEEE
Confidence 999973
|
| >2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.86 E-value=3e-05 Score=67.64 Aligned_cols=117 Identities=16% Similarity=0.147 Sum_probs=66.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCcccccee-eccCcc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFA-AGLPGS 140 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~-~gvp~S 140 (367)
...+|+|+|||+|..|+.+.+.. ...+.....+ .-+|+-.|+.... .++ +-.+. .+ .
T Consensus 22 ~~~~vLDlGcG~G~~~~~la~~~--------~~~~~~~~~~---~~~v~~vD~s~~~------~~~--~~~~~~~~---d 79 (196)
T 2nyu_A 22 PGLRVLDCGAAPGAWSQVAVQKV--------NAAGTDPSSP---VGFVLGVDLLHIF------PLE--GATFLCPA---D 79 (196)
T ss_dssp TTCEEEEETCCSCHHHHHHHHHT--------TTTCCCTTSC---CCEEEEECSSCCC------CCT--TCEEECSC---C
T ss_pred CCCEEEEeCCCCCHHHHHHHHHh--------ccccccccCC---CceEEEEechhcc------cCC--CCeEEEec---c
Confidence 35799999999999998876332 1100000012 2467888876421 011 11122 22 2
Q ss_pred ccc--------cCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHH
Q 017702 141 FHS--------RLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARA 212 (367)
Q Consensus 141 Fy~--------~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra 212 (367)
+.. ..++.+++|+++|..++||.-... .. ..........+|+.-.
T Consensus 80 ~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~-------------------------~~--~~~~~~~~~~~l~~~~ 132 (196)
T 2nyu_A 80 VTDPRTSQRILEVLPGRRADVILSDMAPNATGFRD-------------------------LD--HDRLISLCLTLLSVTP 132 (196)
T ss_dssp TTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHH-------------------------HH--HHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcc-------------------------cC--HHHHHHHHHHHHHHHH
Confidence 221 124667999999987766632100 00 0011123356788888
Q ss_pred HhhccCceEEEEeec
Q 017702 213 EELVPGGLMVLILAA 227 (367)
Q Consensus 213 ~EL~pGG~lvl~~~g 227 (367)
+-|+|||+|++..+.
T Consensus 133 ~~LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 133 DILQPGGTFLCKTWA 147 (196)
T ss_dssp HHEEEEEEEEEEECC
T ss_pred HHhcCCCEEEEEecC
Confidence 999999999998765
|
| >1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=97.86 E-value=7.3e-05 Score=69.16 Aligned_cols=101 Identities=17% Similarity=0.279 Sum_probs=62.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC------ccccceee
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP------HARKYFAA 135 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~------~~~~~f~~ 135 (367)
...+|+|+|||+|..+..+...+ .| ..+++--|....-....-+.+. ..+-.+.
T Consensus 99 ~~~~vLdiG~G~G~~~~~l~~~~----------------~~---~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~- 158 (280)
T 1i9g_A 99 PGARVLEAGAGSGALTLSLLRAV----------------GP---AGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLV- 158 (280)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH----------------CT---TSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEE-
T ss_pred CCCEEEEEcccccHHHHHHHHHh----------------CC---CCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEE-
Confidence 34699999999999999877433 12 2367777875322211111111 0111222
Q ss_pred ccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhh
Q 017702 136 GLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEEL 215 (367)
Q Consensus 136 gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL 215 (367)
.+++.+..++++++|++++...-.| .+|..-.+-|
T Consensus 159 --~~d~~~~~~~~~~~D~v~~~~~~~~-------------------------------------------~~l~~~~~~L 193 (280)
T 1i9g_A 159 --VSDLADSELPDGSVDRAVLDMLAPW-------------------------------------------EVLDAVSRLL 193 (280)
T ss_dssp --CSCGGGCCCCTTCEEEEEEESSCGG-------------------------------------------GGHHHHHHHE
T ss_pred --ECchHhcCCCCCceeEEEECCcCHH-------------------------------------------HHHHHHHHhC
Confidence 2344555567889999998321111 2677888899
Q ss_pred ccCceEEEEeec
Q 017702 216 VPGGLMVLILAA 227 (367)
Q Consensus 216 ~pGG~lvl~~~g 227 (367)
+|||++++..+.
T Consensus 194 ~pgG~l~~~~~~ 205 (280)
T 1i9g_A 194 VAGGVLMVYVAT 205 (280)
T ss_dssp EEEEEEEEEESS
T ss_pred CCCCEEEEEeCC
Confidence 999999998865
|
| >3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.85 E-value=8e-05 Score=68.58 Aligned_cols=125 Identities=14% Similarity=0.089 Sum_probs=65.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC---Ccc-ccceeecc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL---PHA-RKYFAAGL 137 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l---~~~-~~~f~~gv 137 (367)
+..+|+|+|||+|..++.+.+. .+ . +|+-.|+...-....-+++ .-. +-.+..+.
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~-----------------~~---~-~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D 107 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTR-----------------TK---A-KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYD 107 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTT-----------------CC---C-EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSC
T ss_pred CCCEEEEcCCchhHHHHHHHHh-----------------cC---C-cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECc
Confidence 4579999999999988876521 12 3 6777777543222221111 111 12344443
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
-..+. ..++++++|+|+|+-.++..... ...+ +.+....-......++..||+.-.+-|+|
T Consensus 108 ~~~~~-~~~~~~~fD~Ii~npPy~~~~~~--~~~~----------------~~~~~~~a~~~~~~~~~~~l~~~~~~Lkp 168 (259)
T 3lpm_A 108 LKKIT-DLIPKERADIVTCNPPYFATPDT--SLKN----------------TNEHFRIARHEVMCTLEDTIRVAASLLKQ 168 (259)
T ss_dssp GGGGG-GTSCTTCEEEEEECCCC-----------------------------------------HHHHHHHHHHHHHEEE
T ss_pred HHHhh-hhhccCCccEEEECCCCCCCccc--cCCC----------------CchHHHhhhccccCCHHHHHHHHHHHccC
Confidence 22221 22568999999997554432100 0000 00000000111235678899999999999
Q ss_pred CceEEEEee
Q 017702 218 GGLMVLILA 226 (367)
Q Consensus 218 GG~lvl~~~ 226 (367)
||+|++...
T Consensus 169 gG~l~~~~~ 177 (259)
T 3lpm_A 169 GGKANFVHR 177 (259)
T ss_dssp EEEEEEEEC
T ss_pred CcEEEEEEc
Confidence 999999654
|
| >2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=97.85 E-value=3.6e-05 Score=73.74 Aligned_cols=76 Identities=13% Similarity=0.075 Sum_probs=24.3
Q ss_pred HHHHHHHhhccCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCC-CCHhh-hhccCCCccc----CCHHHH
Q 017702 207 FLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGV-LSEEK-VDSFNLPTYN----ATPKEL 280 (367)
Q Consensus 207 fL~~Ra~EL~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~-i~~~~-~d~f~~P~y~----~s~eE~ 280 (367)
+|..-.+-|+|||+|++.... . +.+...+..|...+. +..++ .....-.|.. +...+|
T Consensus 201 ~l~~~~~~LkpgG~lv~~~~~-~---------------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~~~~~~~~g~y 264 (336)
T 2b25_A 201 TLPVFYPHLKHGGVCAVYVVN-I---------------TQVIELLDGIRTCELALSCEKISEVIVRDWLVCLAKQKNGIL 264 (336)
T ss_dssp THHHHGGGEEEEEEEEEEESS-H---------------HHHHHHHHHHHHHTCCEEEEEEECCCCCCEEECC--------
T ss_pred HHHHHHHhcCCCcEEEEEeCC-H---------------HHHHHHHHHHHhcCCCcccceEEEecccceEEEeecccccch
Confidence 567777899999999977654 1 223333443433211 11110 1111122222 223389
Q ss_pred HHHHHhCCceEEeEEEEEe
Q 017702 281 EAIIRTNGNFTIEKMEKLS 299 (367)
Q Consensus 281 ~~~l~~~g~F~I~~lE~~~ 299 (367)
.+.++++| |+..+++...
T Consensus 265 ~~~l~~aG-F~~v~~~~~~ 282 (336)
T 2b25_A 265 AQKVESKI-NTDVQLDSQE 282 (336)
T ss_dssp -------------------
T ss_pred hhhhcccc-cccccccccc
Confidence 99999997 9888776654
|
| >1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7 | Back alignment and structure |
|---|
Probab=97.84 E-value=2.5e-05 Score=70.19 Aligned_cols=77 Identities=17% Similarity=0.037 Sum_probs=43.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCcc-ccceeeccCcc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHA-RKYFAAGLPGS 140 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~-~~~f~~gvp~S 140 (367)
...+|+|+|||+|..+..+.... .+|+--|....-....-+.+... +--|..+.
T Consensus 70 ~~~~vLdiG~G~G~~~~~l~~~~----------------------~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d--- 124 (231)
T 1vbf_A 70 KGQKVLEIGTGIGYYTALIAEIV----------------------DKVVSVEINEKMYNYASKLLSYYNNIKLILGD--- 124 (231)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS----------------------SEEEEEESCHHHHHHHHHHHTTCSSEEEEESC---
T ss_pred CCCEEEEEcCCCCHHHHHHHHHc----------------------CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECC---
Confidence 34699999999999998876321 03455555422111111111111 11233332
Q ss_pred ccccCCCCCceeEEEeccccccc
Q 017702 141 FHSRLFPRSSIHFVHTSYALHWL 163 (367)
Q Consensus 141 Fy~~l~P~~svd~~~S~~alhWL 163 (367)
+.+.+.+.+++|++++..++|++
T Consensus 125 ~~~~~~~~~~fD~v~~~~~~~~~ 147 (231)
T 1vbf_A 125 GTLGYEEEKPYDRVVVWATAPTL 147 (231)
T ss_dssp GGGCCGGGCCEEEEEESSBBSSC
T ss_pred cccccccCCCccEEEECCcHHHH
Confidence 33323346799999999999874
|
| >4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.82 E-value=1.3e-05 Score=78.62 Aligned_cols=108 Identities=17% Similarity=0.131 Sum_probs=64.2
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc---c---ccceeec
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH---A---RKYFAAG 136 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~---~---~~~f~~g 136 (367)
..+|+|+|||+|..++.+... .| ..+|+..|....--...-+++.. . +--|..+
T Consensus 223 ~~~VLDlGcG~G~~s~~la~~-----------------~p---~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~ 282 (375)
T 4dcm_A 223 EGEIVDLGCGNGVIGLTLLDK-----------------NP---QAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMIN 282 (375)
T ss_dssp CSEEEEETCTTCHHHHHHHHH-----------------CT---TCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEEC
T ss_pred CCeEEEEeCcchHHHHHHHHH-----------------CC---CCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEec
Confidence 379999999999999887632 12 23678878753221111111110 0 1113333
Q ss_pred cCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhc
Q 017702 137 LPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELV 216 (367)
Q Consensus 137 vp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~ 216 (367)
. +++ .+|++++|+|+|+-.+|+...++.. ....||+.-.+-|+
T Consensus 283 D---~~~-~~~~~~fD~Ii~nppfh~~~~~~~~---------------------------------~~~~~l~~~~~~Lk 325 (375)
T 4dcm_A 283 N---ALS-GVEPFRFNAVLCNPPFHQQHALTDN---------------------------------VAWEMFHHARRCLK 325 (375)
T ss_dssp S---TTT-TCCTTCEEEEEECCCC-------CC---------------------------------HHHHHHHHHHHHEE
T ss_pred h---hhc-cCCCCCeeEEEECCCcccCcccCHH---------------------------------HHHHHHHHHHHhCC
Confidence 3 333 4578899999999999985544321 12258888889999
Q ss_pred cCceEEEEeec
Q 017702 217 PGGLMVLILAA 227 (367)
Q Consensus 217 pGG~lvl~~~g 227 (367)
|||+++++...
T Consensus 326 pgG~l~iv~n~ 336 (375)
T 4dcm_A 326 INGELYIVANR 336 (375)
T ss_dssp EEEEEEEEEET
T ss_pred CCcEEEEEEEC
Confidence 99999997643
|
| >3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E* | Back alignment and structure |
|---|
Probab=97.81 E-value=5.3e-05 Score=69.64 Aligned_cols=106 Identities=11% Similarity=0.021 Sum_probs=57.3
Q ss_pred hHHHhhHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCC
Q 017702 23 SYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKP 102 (367)
Q Consensus 23 sY~~nS~~Q~~~~~~~~~ll~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p 102 (367)
.|......|.+....+...++ . +. .....+|+|+|||+|..|..+.+.+ .|
T Consensus 50 ~yr~w~~~~skla~~ll~~l~----~---~~------l~~g~~VLDlG~GtG~~t~~la~~v----------------~~ 100 (232)
T 3id6_C 50 EYREWNAFRSKLAGAILKGLK----T---NP------IRKGTKVLYLGAASGTTISHVSDII----------------EL 100 (232)
T ss_dssp EEEECCTTTCHHHHHHHTTCS----C---CS------CCTTCEEEEETCTTSHHHHHHHHHH----------------TT
T ss_pred chhhhchHHHHHHHHHHhhhh----h---cC------CCCCCEEEEEeecCCHHHHHHHHHh----------------CC
Confidence 376677778777665433321 0 11 2335899999999999998886443 11
Q ss_pred CcceeEEEEcCCCccchHHHhhcCC-ccccceeeccCccccccCCCCCceeEEEecccc
Q 017702 103 SALEFQVFLNDHSDNDFNTLFKSLP-HARKYFAAGLPGSFHSRLFPRSSIHFVHTSYAL 160 (367)
Q Consensus 103 ~~~e~~v~~nDlp~NDFn~lf~~l~-~~~~~f~~gvp~SFy~~l~P~~svd~~~S~~al 160 (367)
.=+|+--|+....-..+.+... ..+-.+..+............+++|+++|..+.
T Consensus 101 ---~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~a~ 156 (232)
T 3id6_C 101 ---NGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVDIAQ 156 (232)
T ss_dssp ---TSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEECCCC
T ss_pred ---CCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEecCCC
Confidence 2267777775432212211110 012234444433211111224689999997653
|
| >3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.80 E-value=6.3e-05 Score=72.30 Aligned_cols=112 Identities=14% Similarity=0.128 Sum_probs=70.2
Q ss_pred CCCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhh-cCC---ccccceee
Q 017702 60 TLKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFK-SLP---HARKYFAA 135 (367)
Q Consensus 60 ~~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~-~l~---~~~~~f~~ 135 (367)
.+++.+|+|+|||+|..+..+.+.. | ..++..-|+-..- -.+.+ .++ ..+--+..
T Consensus 87 ~p~~~rVLdIG~G~G~la~~la~~~-----------------p---~~~v~~VEidp~v-i~~Ar~~~~~~~~~rv~v~~ 145 (317)
T 3gjy_A 87 DASKLRITHLGGGACTMARYFADVY-----------------P---QSRNTVVELDAEL-ARLSREWFDIPRAPRVKIRV 145 (317)
T ss_dssp CGGGCEEEEESCGGGHHHHHHHHHS-----------------T---TCEEEEEESCHHH-HHHHHHHSCCCCTTTEEEEE
T ss_pred CCCCCEEEEEECCcCHHHHHHHHHC-----------------C---CcEEEEEECCHHH-HHHHHHhccccCCCceEEEE
Confidence 3456799999999998888776321 2 2355666664311 11111 111 12334566
Q ss_pred ccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhh
Q 017702 136 GLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEEL 215 (367)
Q Consensus 136 gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL 215 (367)
+....|... ++++++|+|++....+| ..|..+. ...|++..++-|
T Consensus 146 ~Da~~~l~~-~~~~~fDvIi~D~~~~~--~~~~~L~--------------------------------t~efl~~~~r~L 190 (317)
T 3gjy_A 146 DDARMVAES-FTPASRDVIIRDVFAGA--ITPQNFT--------------------------------TVEFFEHCHRGL 190 (317)
T ss_dssp SCHHHHHHT-CCTTCEEEEEECCSTTS--CCCGGGS--------------------------------BHHHHHHHHHHE
T ss_pred CcHHHHHhh-ccCCCCCEEEECCCCcc--ccchhhh--------------------------------HHHHHHHHHHhc
Confidence 665555443 36789999999877666 2232221 125899999999
Q ss_pred ccCceEEEEeec
Q 017702 216 VPGGLMVLILAA 227 (367)
Q Consensus 216 ~pGG~lvl~~~g 227 (367)
+|||+|++....
T Consensus 191 kpgGvlv~~~~~ 202 (317)
T 3gjy_A 191 APGGLYVANCGD 202 (317)
T ss_dssp EEEEEEEEEEEE
T ss_pred CCCcEEEEEecC
Confidence 999999998875
|
| >1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A* | Back alignment and structure |
|---|
Probab=97.79 E-value=3.9e-05 Score=72.24 Aligned_cols=40 Identities=18% Similarity=0.290 Sum_probs=32.8
Q ss_pred CCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEEE
Q 017702 148 RSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVL 223 (367)
Q Consensus 148 ~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl 223 (367)
.+++|+|+|.+.|+|+.. .+..+.|+.-++-|+|||+|++
T Consensus 211 ~~~fDlI~crnvliyf~~------------------------------------~~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 211 PGPFDAIFCRNVMIYFDK------------------------------------TTQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp CCCEEEEEECSSGGGSCH------------------------------------HHHHHHHHHHGGGEEEEEEEEE
T ss_pred CCCeeEEEECCchHhCCH------------------------------------HHHHHHHHHHHHHhCCCcEEEE
Confidence 578999999999999752 1335688888999999999976
|
| >3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A* | Back alignment and structure |
|---|
Probab=97.77 E-value=0.00016 Score=71.99 Aligned_cols=21 Identities=29% Similarity=0.321 Sum_probs=17.9
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAVQ 82 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~ 82 (367)
...+|+|+|||+|..++.+..
T Consensus 173 ~gd~VLDLGCGtG~l~l~lA~ 193 (438)
T 3uwp_A 173 DDDLFVDLGSGVGQVVLQVAA 193 (438)
T ss_dssp TTCEEEEESCTTSHHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHH
Confidence 457899999999999988763
|
| >3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.77 E-value=1.4e-05 Score=71.54 Aligned_cols=82 Identities=18% Similarity=0.147 Sum_probs=49.3
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHH---hhcCCccccceeecc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTL---FKSLPHARKYFAAGL 137 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~l---f~~l~~~~~~f~~gv 137 (367)
+.+-+|+|+|||+|+.++.++.. .| ..+++-.|....--.-. +.......++-+ +
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~-----------------~p---~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~-~- 105 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNE-----------------NE---KIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF-L- 105 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCS-----------------SC---CCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE-E-
T ss_pred CCCCeEEEecCCCCHHHHHHHhc-----------------CC---CCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE-e-
Confidence 34689999999999999988611 34 44677777753111100 001111112222 1
Q ss_pred CccccccCCCCCceeEEEeccccccccCCC
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVP 167 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P 167 (367)
..-. ..|+.++|++.++..+|-|.+.+
T Consensus 106 --d~~~-~~~~~~~DvVLa~k~LHlL~~~~ 132 (200)
T 3fzg_A 106 --NKES-DVYKGTYDVVFLLKMLPVLKQQD 132 (200)
T ss_dssp --CCHH-HHTTSEEEEEEEETCHHHHHHTT
T ss_pred --cccc-cCCCCCcChhhHhhHHHhhhhhH
Confidence 1222 26889999999999999995544
|
| >2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.76 E-value=7.2e-06 Score=79.22 Aligned_cols=107 Identities=16% Similarity=0.220 Sum_probs=66.9
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC--ccccceeeccCcc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP--HARKYFAAGLPGS 140 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~--~~~~~f~~gvp~S 140 (367)
..+|+|+|||+|..++.+.... | ..+|+..|....-....-+.+. .....+..+ .
T Consensus 197 ~~~VLDlGcG~G~~~~~la~~~-----------------~---~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~---d 253 (343)
T 2pjd_A 197 KGKVLDVGCGAGVLSVAFARHS-----------------P---KIRLTLCDVSAPAVEASRATLAANGVEGEVFAS---N 253 (343)
T ss_dssp CSBCCBTTCTTSHHHHHHHHHC-----------------T---TCBCEEEESBHHHHHHHHHHHHHTTCCCEEEEC---S
T ss_pred CCeEEEecCccCHHHHHHHHHC-----------------C---CCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEc---c
Confidence 3589999999999998776221 2 2357777775322111111111 001122222 3
Q ss_pred ccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCce
Q 017702 141 FHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGL 220 (367)
Q Consensus 141 Fy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~ 220 (367)
+.. ++++++|+|+|+..+||.... ...+...+|+.-.+-|+|||.
T Consensus 254 ~~~--~~~~~fD~Iv~~~~~~~g~~~---------------------------------~~~~~~~~l~~~~~~LkpgG~ 298 (343)
T 2pjd_A 254 VFS--EVKGRFDMIISNPPFHDGMQT---------------------------------SLDAAQTLIRGAVRHLNSGGE 298 (343)
T ss_dssp TTT--TCCSCEEEEEECCCCCSSSHH---------------------------------HHHHHHHHHHHHGGGEEEEEE
T ss_pred ccc--cccCCeeEEEECCCcccCccC---------------------------------CHHHHHHHHHHHHHhCCCCcE
Confidence 333 246899999999999983210 123567899999999999999
Q ss_pred EEEEeec
Q 017702 221 MVLILAA 227 (367)
Q Consensus 221 lvl~~~g 227 (367)
|++....
T Consensus 299 l~i~~~~ 305 (343)
T 2pjd_A 299 LRIVANA 305 (343)
T ss_dssp EEEEEET
T ss_pred EEEEEcC
Confidence 9987654
|
| >2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=97.76 E-value=8.2e-05 Score=68.88 Aligned_cols=125 Identities=18% Similarity=0.196 Sum_probs=66.7
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc-------ccccee
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH-------ARKYFA 134 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~-------~~~~f~ 134 (367)
...+|+|+|||+|..++.+.+.. | ..+++..|+-..-....-+++.. .+-.+.
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~-----------------~---~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~ 95 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARL-----------------E---KAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVL 95 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHC-----------------T---TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEE
T ss_pred CCCEEEEeCChHhHHHHHHHHhC-----------------C---CCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEE
Confidence 45799999999999998776321 2 23567777653222221112211 012233
Q ss_pred eccCccccc----cCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHH-HHHhhHHHHHH
Q 017702 135 AGLPGSFHS----RLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYST-QYKNDMESFLN 209 (367)
Q Consensus 135 ~gvp~SFy~----~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~-Q~~~D~~~fL~ 209 (367)
.+.-..+.. ..++++++|+|+|+-.+++..... +++...+.+. ....++..||+
T Consensus 96 ~~D~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~---------------------~~~~~~~~a~~~~~~~~~~~l~ 154 (260)
T 2ozv_A 96 EADVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRR---------------------TPDALKAEAHAMTEGLFEDWIR 154 (260)
T ss_dssp ECCTTCCHHHHHHTTCCTTCEEEEEECCCC------------------------------------------CCHHHHHH
T ss_pred eCCHHHHhhhhhhhccCCCCcCEEEECCCCcCCCCCC---------------------CcCHHHHHHhhcCcCCHHHHHH
Confidence 343222211 236788999999975555532100 0111111111 11235778999
Q ss_pred HHHHhhccCceEEEEeec
Q 017702 210 ARAEELVPGGLMVLILAA 227 (367)
Q Consensus 210 ~Ra~EL~pGG~lvl~~~g 227 (367)
.-++-|+|||+|++....
T Consensus 155 ~~~~~LkpgG~l~~~~~~ 172 (260)
T 2ozv_A 155 TASAIMVSGGQLSLISRP 172 (260)
T ss_dssp HHHHHEEEEEEEEEEECG
T ss_pred HHHHHcCCCCEEEEEEcH
Confidence 999999999999997754
|
| >1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A | Back alignment and structure |
|---|
Probab=97.75 E-value=0.00012 Score=65.52 Aligned_cols=106 Identities=12% Similarity=0.072 Sum_probs=59.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc-cccceeeccCcc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH-ARKYFAAGLPGS 140 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~-~~~~f~~gvp~S 140 (367)
...+|+|+|||+|..|..+.+.+ .| .-+|+--|....-...+-+.... .+-.|..+.-..
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~----------------~~---~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~ 133 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIV----------------GW---EGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATK 133 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHH----------------CT---TSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTC
T ss_pred CCCEEEEEeccCCHHHHHHHHHh----------------CC---CeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCC
Confidence 34699999999999999887443 11 12466667654321122222111 122344443222
Q ss_pred ccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCce
Q 017702 141 FHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGL 220 (367)
Q Consensus 141 Fy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~ 220 (367)
......+++++|++++... .|. ....+|+.-.+-|+|||+
T Consensus 134 ~~~~~~~~~~~D~v~~~~~------~~~----------------------------------~~~~~l~~~~~~LkpgG~ 173 (227)
T 1g8a_A 134 PEEYRALVPKVDVIFEDVA------QPT----------------------------------QAKILIDNAEVYLKRGGY 173 (227)
T ss_dssp GGGGTTTCCCEEEEEECCC------STT----------------------------------HHHHHHHHHHHHEEEEEE
T ss_pred cchhhcccCCceEEEECCC------CHh----------------------------------HHHHHHHHHHHhcCCCCE
Confidence 1100122468999997543 010 112357788899999999
Q ss_pred EEEEee
Q 017702 221 MVLILA 226 (367)
Q Consensus 221 lvl~~~ 226 (367)
+++.+.
T Consensus 174 l~~~~~ 179 (227)
T 1g8a_A 174 GMIAVK 179 (227)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999943
|
| >1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=97.74 E-value=3.3e-05 Score=71.92 Aligned_cols=100 Identities=10% Similarity=0.178 Sum_probs=62.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC----Cccccceeecc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL----PHARKYFAAGL 137 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l----~~~~~~f~~gv 137 (367)
...+|+|+|||+|..+..+.+.+ .| ..+|+.-|+...-....-+.+ ...+-.|..+.
T Consensus 110 ~~~~VLD~G~G~G~~~~~la~~~----------------~~---~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d 170 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYILYAL----------------NG---KGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSD 170 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH----------------TT---SSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSC
T ss_pred CcCEEEEecCCCCHHHHHHHHHc----------------CC---CCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECc
Confidence 45799999999999998876443 12 236788887542222111111 11122233333
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
+.+ .+|++++|++++ | +|.. ..+|+.-.+-|+|
T Consensus 171 ---~~~-~~~~~~fD~Vi~----~----~~~~-----------------------------------~~~l~~~~~~Lkp 203 (275)
T 1yb2_A 171 ---IAD-FISDQMYDAVIA----D----IPDP-----------------------------------WNHVQKIASMMKP 203 (275)
T ss_dssp ---TTT-CCCSCCEEEEEE----C----CSCG-----------------------------------GGSHHHHHHTEEE
T ss_pred ---hhc-cCcCCCccEEEE----c----CcCH-----------------------------------HHHHHHHHHHcCC
Confidence 333 567789999998 2 2311 1378888899999
Q ss_pred CceEEEEeec
Q 017702 218 GGLMVLILAA 227 (367)
Q Consensus 218 GG~lvl~~~g 227 (367)
||++++....
T Consensus 204 gG~l~i~~~~ 213 (275)
T 1yb2_A 204 GSVATFYLPN 213 (275)
T ss_dssp EEEEEEEESS
T ss_pred CCEEEEEeCC
Confidence 9999998864
|
| >3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A* | Back alignment and structure |
|---|
Probab=97.73 E-value=4e-05 Score=75.94 Aligned_cols=101 Identities=19% Similarity=0.228 Sum_probs=65.6
Q ss_pred CceEEeeecCC------CCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceee
Q 017702 62 KPFKIADLGCS------VGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAA 135 (367)
Q Consensus 62 ~~~~IaD~GCs------~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~ 135 (367)
++.+|+|+||| +|..|+.++... .| .-+|+--|+..+. .+ ...+--|..
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~----------------fP---~a~V~GVDiSp~m---~~---~~~rI~fv~ 270 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSF----------------FP---RGQIYGLDIMDKS---HV---DELRIRTIQ 270 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHH----------------CT---TCEEEEEESSCCG---GG---CBTTEEEEE
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHh----------------CC---CCEEEEEECCHHH---hh---cCCCcEEEE
Confidence 46899999999 888888776332 12 2368888886553 11 112333555
Q ss_pred ccCcc--ccccCC-CCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHH
Q 017702 136 GLPGS--FHSRLF-PRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARA 212 (367)
Q Consensus 136 gvp~S--Fy~~l~-P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra 212 (367)
|.-.+ |...+. +.+++|+|+|..+ ||.. |+..+|+.-.
T Consensus 271 GDa~dlpf~~~l~~~d~sFDlVisdgs-H~~~--------------------------------------d~~~aL~el~ 311 (419)
T 3sso_A 271 GDQNDAEFLDRIARRYGPFDIVIDDGS-HINA--------------------------------------HVRTSFAALF 311 (419)
T ss_dssp CCTTCHHHHHHHHHHHCCEEEEEECSC-CCHH--------------------------------------HHHHHHHHHG
T ss_pred ecccccchhhhhhcccCCccEEEECCc-ccch--------------------------------------hHHHHHHHHH
Confidence 55322 111111 1589999999765 5421 5556888888
Q ss_pred HhhccCceEEEEee
Q 017702 213 EELVPGGLMVLILA 226 (367)
Q Consensus 213 ~EL~pGG~lvl~~~ 226 (367)
+-|||||+|++.-.
T Consensus 312 rvLKPGGvlVi~Dl 325 (419)
T 3sso_A 312 PHVRPGGLYVIEDM 325 (419)
T ss_dssp GGEEEEEEEEEECG
T ss_pred HhcCCCeEEEEEec
Confidence 99999999999754
|
| >2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00016 Score=61.61 Aligned_cols=72 Identities=15% Similarity=0.134 Sum_probs=40.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC---CccccceeeccC
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL---PHARKYFAAGLP 138 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l---~~~~~~f~~gvp 138 (367)
+..+|+|+|||+|..+..+.. + ..+++..|....-....-+.+ ...+-.+..+
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~~-------------------~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~-- 90 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIAK-------------------R---CKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKG-- 90 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHHT-------------------T---SSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEES--
T ss_pred CCCEEEEeCCCCCHHHHHHHh-------------------c---CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEEC--
Confidence 346999999999999988762 1 225667676532222111111 1011122222
Q ss_pred ccccccCCCCCceeEEEeccc
Q 017702 139 GSFHSRLFPRSSIHFVHTSYA 159 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~~a 159 (367)
++.+ .+|++++|+++++.+
T Consensus 91 -d~~~-~~~~~~~D~i~~~~~ 109 (183)
T 2yxd_A 91 -RAED-VLDKLEFNKAFIGGT 109 (183)
T ss_dssp -CHHH-HGGGCCCSEEEECSC
T ss_pred -Cccc-cccCCCCcEEEECCc
Confidence 3333 456678999999765
|
| >1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33 | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00011 Score=67.63 Aligned_cols=96 Identities=25% Similarity=0.345 Sum_probs=59.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCccc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSF 141 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SF 141 (367)
...+|+|+|||+|..+..+.+.. | ..+++--|...+--...-+..+ +-.|..+. +
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~-----------------~---~~~v~~vD~s~~~~~~a~~~~~--~~~~~~~d---~ 139 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADAL-----------------P---EITTFGLDVSKVAIKAAAKRYP--QVTFCVAS---S 139 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTC-----------------T---TSEEEEEESCHHHHHHHHHHCT--TSEEEECC---T
T ss_pred CCCEEEEECCCCCHHHHHHHHhC-----------------C---CCeEEEEeCCHHHHHHHHHhCC--CcEEEEcc---h
Confidence 45799999999999998776321 1 1257777775432222111111 11233333 2
Q ss_pred cccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceE
Q 017702 142 HSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLM 221 (367)
Q Consensus 142 y~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~l 221 (367)
..--++++++|+++|+.+ |. +|+.-.+-|+|||++
T Consensus 140 ~~~~~~~~~fD~v~~~~~-------~~--------------------------------------~l~~~~~~L~pgG~l 174 (269)
T 1p91_A 140 HRLPFSDTSMDAIIRIYA-------PC--------------------------------------KAEELARVVKPGGWV 174 (269)
T ss_dssp TSCSBCTTCEEEEEEESC-------CC--------------------------------------CHHHHHHHEEEEEEE
T ss_pred hhCCCCCCceeEEEEeCC-------hh--------------------------------------hHHHHHHhcCCCcEE
Confidence 233367789999998543 11 355556789999999
Q ss_pred EEEeec
Q 017702 222 VLILAA 227 (367)
Q Consensus 222 vl~~~g 227 (367)
++..++
T Consensus 175 ~~~~~~ 180 (269)
T 1p91_A 175 ITATPG 180 (269)
T ss_dssp EEEEEC
T ss_pred EEEEcC
Confidence 999987
|
| >1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=9.4e-05 Score=63.53 Aligned_cols=22 Identities=23% Similarity=0.460 Sum_probs=19.1
Q ss_pred HHHHHHHHhhccCceEEEEeec
Q 017702 206 SFLNARAEELVPGGLMVLILAA 227 (367)
Q Consensus 206 ~fL~~Ra~EL~pGG~lvl~~~g 227 (367)
.+|+.-.+-|+|||++++....
T Consensus 115 ~~l~~~~~~l~~gG~l~~~~~~ 136 (192)
T 1l3i_A 115 EILRIIKDKLKPGGRIIVTAIL 136 (192)
T ss_dssp HHHHHHHHTEEEEEEEEEEECB
T ss_pred HHHHHHHHhcCCCcEEEEEecC
Confidence 5888888999999999988765
|
| >3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A* | Back alignment and structure |
|---|
Probab=97.70 E-value=7.6e-05 Score=68.89 Aligned_cols=104 Identities=16% Similarity=0.121 Sum_probs=60.5
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhc---CCccccceeecc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKS---LPHARKYFAAGL 137 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~---l~~~~~~f~~gv 137 (367)
....+|+|+|||+|..++.+... .| ..+|+.-|....-...+-+. +.-.+-.|..+.
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~-----------------~~---~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d 138 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIV-----------------RP---ELELVLVDATRKKVAFVERAIEVLGLKGARALWGR 138 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHH-----------------CT---TCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECC
T ss_pred CCCCEEEEEcCCCCHHHHHHHHH-----------------CC---CCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECc
Confidence 34679999999999999887622 12 34677777754221111111 111112233333
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
--.+-....+++++|+|+|...- |+..++.....-|+|
T Consensus 139 ~~~~~~~~~~~~~fD~I~s~a~~------------------------------------------~~~~ll~~~~~~Lkp 176 (249)
T 3g89_A 139 AEVLAREAGHREAYARAVARAVA------------------------------------------PLCVLSELLLPFLEV 176 (249)
T ss_dssp HHHHTTSTTTTTCEEEEEEESSC------------------------------------------CHHHHHHHHGGGEEE
T ss_pred HHHhhcccccCCCceEEEECCcC------------------------------------------CHHHHHHHHHHHcCC
Confidence 11111111224899999984311 344688888899999
Q ss_pred CceEEEEee
Q 017702 218 GGLMVLILA 226 (367)
Q Consensus 218 GG~lvl~~~ 226 (367)
||+|++...
T Consensus 177 gG~l~~~~g 185 (249)
T 3g89_A 177 GGAAVAMKG 185 (249)
T ss_dssp EEEEEEEEC
T ss_pred CeEEEEEeC
Confidence 999987653
|
| >4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=97.68 E-value=2.3e-05 Score=68.89 Aligned_cols=127 Identities=12% Similarity=0.009 Sum_probs=61.1
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCcc--ccceeeccC
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHA--RKYFAAGLP 138 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~--~~~f~~gvp 138 (367)
.+..+|+|+|||+|..++.+.+.. | ..+++--|+...-....-+.+... +-.|..
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~-----------------~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~--- 85 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALAC-----------------P---GVSVTAVDLSMDALAVARRNAERFGAVVDWAA--- 85 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHC-----------------T---TEEEEEEECC-------------------CCH---
T ss_pred CCCCEEEEecCCHhHHHHHHHHhC-----------------C---CCeEEEEECCHHHHHHHHHHHHHhCCceEEEE---
Confidence 456899999999999998776321 2 236777777532211111111110 111222
Q ss_pred ccccccCCCC-----CceeEEEeccccccccCCC---ccccCCC-CCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHH
Q 017702 139 GSFHSRLFPR-----SSIHFVHTSYALHWLSKVP---KEIVDPC-SPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLN 209 (367)
Q Consensus 139 ~SFy~~l~P~-----~svd~~~S~~alhWLs~~P---~~~~~~~-~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~ 209 (367)
+++.+ .+++ +++|+++++-.+++..... ..+.... ..++.. .......+..||+
T Consensus 86 ~d~~~-~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~l~ 148 (215)
T 4dzr_A 86 ADGIE-WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDG----------------GEDGLQFYRRMAA 148 (215)
T ss_dssp HHHHH-HHHHHHHTTCCBSEEEECCCCCC----------------------------------------CTTHHHHHHHT
T ss_pred cchHh-hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccC----------------CCcHHHHHHHHHH
Confidence 23333 4444 8999999987766544321 1111000 000000 0001123467888
Q ss_pred HHHHhhccCceEEEEeec
Q 017702 210 ARAEELVPGGLMVLILAA 227 (367)
Q Consensus 210 ~Ra~EL~pGG~lvl~~~g 227 (367)
.-.+-|+|||++++...+
T Consensus 149 ~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 149 LPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp CCGGGBCSSSEEEEEECT
T ss_pred HHHHHhcCCCeEEEEEEC
Confidence 888999999995444444
|
| >2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46 | Back alignment and structure |
|---|
Probab=97.67 E-value=7.8e-05 Score=66.16 Aligned_cols=18 Identities=17% Similarity=-0.045 Sum_probs=16.0
Q ss_pred eEEeeecCCCCcccHHHH
Q 017702 64 FKIADLGCSVGPNTLLAV 81 (367)
Q Consensus 64 ~~IaD~GCs~G~nT~~~~ 81 (367)
.+|+|+|||+|..++.++
T Consensus 55 ~~vLDlGcGtG~~~~~~~ 72 (201)
T 2ift_A 55 SECLDGFAGSGSLGFEAL 72 (201)
T ss_dssp CEEEETTCTTCHHHHHHH
T ss_pred CeEEEcCCccCHHHHHHH
Confidence 689999999999998755
|
| >1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20 | Back alignment and structure |
|---|
Probab=97.66 E-value=4.5e-05 Score=67.16 Aligned_cols=98 Identities=10% Similarity=-0.024 Sum_probs=59.9
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC---CccccceeeccCc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL---PHARKYFAAGLPG 139 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l---~~~~~~f~~gvp~ 139 (367)
..+|+|+|||+|..++.+.... | ..+++..|....-....-+.+ ...+-.|..+.
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~-----------------~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d-- 123 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVR-----------------P---EAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSR-- 123 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHC-----------------T---TSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECC--
T ss_pred CCeEEEECCCCCHHHHHHHHHC-----------------C---CCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecc--
Confidence 4699999999999998876321 2 236777777532222111111 11111233332
Q ss_pred cccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 140 SFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
+. .+.|++++|+++|... .++..+|+.-.+-|+|||
T Consensus 124 -~~-~~~~~~~~D~i~~~~~------------------------------------------~~~~~~l~~~~~~L~~gG 159 (207)
T 1jsx_A 124 -VE-EFPSEPPFDGVISRAF------------------------------------------ASLNDMVSWCHHLPGEQG 159 (207)
T ss_dssp -TT-TSCCCSCEEEEECSCS------------------------------------------SSHHHHHHHHTTSEEEEE
T ss_pred -hh-hCCccCCcCEEEEecc------------------------------------------CCHHHHHHHHHHhcCCCc
Confidence 22 2336689999998421 134468888889999999
Q ss_pred eEEEEee
Q 017702 220 LMVLILA 226 (367)
Q Consensus 220 ~lvl~~~ 226 (367)
++++...
T Consensus 160 ~l~~~~~ 166 (207)
T 1jsx_A 160 RFYALKG 166 (207)
T ss_dssp EEEEEES
T ss_pred EEEEEeC
Confidence 9998754
|
| >3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ... | Back alignment and structure |
|---|
Probab=97.65 E-value=2e-05 Score=70.84 Aligned_cols=107 Identities=11% Similarity=0.076 Sum_probs=60.9
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC---Cc-cccceeeccC
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL---PH-ARKYFAAGLP 138 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l---~~-~~~~f~~gvp 138 (367)
..+|+|+|||+|..|+.+.+.+ .+ .-+|+--|+...-....-+.+ .. .+--|..|..
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~----------------~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 119 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLL----------------QP---GARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGAS 119 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTS----------------CT---TCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCH
T ss_pred CCEEEEECCCCCHHHHHHHHhC----------------CC---CCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCH
Confidence 4799999999999999887322 11 235677776532221111111 11 1123444443
Q ss_pred ccccccCC---CCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhh
Q 017702 139 GSFHSRLF---PRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEEL 215 (367)
Q Consensus 139 ~SFy~~l~---P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL 215 (367)
..+...+- +.+++|++++....++.. +...++... +-|
T Consensus 120 ~~~l~~~~~~~~~~~fD~V~~d~~~~~~~--------------------------------------~~~~~~~~~-~~L 160 (221)
T 3u81_A 120 QDLIPQLKKKYDVDTLDMVFLDHWKDRYL--------------------------------------PDTLLLEKC-GLL 160 (221)
T ss_dssp HHHGGGTTTTSCCCCCSEEEECSCGGGHH--------------------------------------HHHHHHHHT-TCC
T ss_pred HHHHHHHHHhcCCCceEEEEEcCCcccch--------------------------------------HHHHHHHhc-ccc
Confidence 22222222 237899999876555521 223466665 889
Q ss_pred ccCceEEEEeec
Q 017702 216 VPGGLMVLILAA 227 (367)
Q Consensus 216 ~pGG~lvl~~~g 227 (367)
+|||+|++....
T Consensus 161 kpgG~lv~~~~~ 172 (221)
T 3u81_A 161 RKGTVLLADNVI 172 (221)
T ss_dssp CTTCEEEESCCC
T ss_pred CCCeEEEEeCCC
Confidence 999999886654
|
| >2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=97.64 E-value=2.2e-05 Score=70.46 Aligned_cols=83 Identities=8% Similarity=-0.045 Sum_probs=45.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC--------ccccce
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP--------HARKYF 133 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~--------~~~~~f 133 (367)
...+|+|+|||+|..+..+.+.. .. . ..| ..+|+-.|....-....-+.+. ..+-.|
T Consensus 80 ~~~~VLdiG~G~G~~~~~la~~~--------~~-~---~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~ 144 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCMAIKM--------NV-L---ENK---NSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKI 144 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHT--------TT-T---TCT---TCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHHh--------cc-c---CCC---CCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEE
Confidence 34799999999999888776322 10 0 012 3367777765322111111111 112223
Q ss_pred eeccCccccccC----CCCCceeEEEecccccc
Q 017702 134 AAGLPGSFHSRL----FPRSSIHFVHTSYALHW 162 (367)
Q Consensus 134 ~~gvp~SFy~~l----~P~~svd~~~S~~alhW 162 (367)
..+. ..+.. .+.+++|++++..++|+
T Consensus 145 ~~~d---~~~~~~~~~~~~~~fD~I~~~~~~~~ 174 (227)
T 2pbf_A 145 IHKN---IYQVNEEEKKELGLFDAIHVGASASE 174 (227)
T ss_dssp EECC---GGGCCHHHHHHHCCEEEEEECSBBSS
T ss_pred EECC---hHhcccccCccCCCcCEEEECCchHH
Confidence 3333 23323 44578999999998886
|
| >1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1 | Back alignment and structure |
|---|
Probab=97.64 E-value=6.9e-05 Score=71.39 Aligned_cols=80 Identities=13% Similarity=0.076 Sum_probs=46.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhc---CCccccceeeccC
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKS---LPHARKYFAAGLP 138 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~---l~~~~~~f~~gvp 138 (367)
...+|+|+|||+|..++.+.+.. . . ..+|+-.|+..+-....-+. ....+--|..+.
T Consensus 75 ~~~~VLDiGcG~G~~~~~la~~~--------~-------~----~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d- 134 (317)
T 1dl5_A 75 KGMRVLEIGGGTGYNAAVMSRVV--------G-------E----KGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGD- 134 (317)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH--------C-------T----TCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC-
T ss_pred CcCEEEEecCCchHHHHHHHHhc--------C-------C----CCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECC-
Confidence 34699999999999998776432 0 0 12466767653222111111 111112233333
Q ss_pred ccccccCCCCCceeEEEeccccccc
Q 017702 139 GSFHSRLFPRSSIHFVHTSYALHWL 163 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~~alhWL 163 (367)
+.+.+.+.+++|+|++...+|++
T Consensus 135 --~~~~~~~~~~fD~Iv~~~~~~~~ 157 (317)
T 1dl5_A 135 --GYYGVPEFSPYDVIFVTVGVDEV 157 (317)
T ss_dssp --GGGCCGGGCCEEEEEECSBBSCC
T ss_pred --hhhccccCCCeEEEEEcCCHHHH
Confidence 33334456889999999999874
|
| >1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00021 Score=65.20 Aligned_cols=22 Identities=14% Similarity=0.249 Sum_probs=18.6
Q ss_pred hHHHHHHHHHHhhccCceEEEE
Q 017702 203 DMESFLNARAEELVPGGLMVLI 224 (367)
Q Consensus 203 D~~~fL~~Ra~EL~pGG~lvl~ 224 (367)
+...||+.-++-|+|||+|+++
T Consensus 192 ~~~~~l~~~~~~LkpgG~l~~~ 213 (250)
T 1o9g_A 192 PVAGLLRSLASALPAHAVIAVT 213 (250)
T ss_dssp HHHHHHHHHHHHSCTTCEEEEE
T ss_pred HHHHHHHHHHHhcCCCcEEEEe
Confidence 5567888888999999999983
|
| >1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=97.61 E-value=0.0001 Score=68.48 Aligned_cols=100 Identities=15% Similarity=0.196 Sum_probs=61.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC---Cc-cccceeecc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL---PH-ARKYFAAGL 137 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l---~~-~~~~f~~gv 137 (367)
...+|+|+|||+|..++.+.+.+ .| ..+++..|....-....-+.+ .- .+-.+..+
T Consensus 112 ~~~~VLDiG~G~G~~~~~la~~~----------------~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~- 171 (277)
T 1o54_A 112 EGDRIIDTGVGSGAMCAVLARAV----------------GS---SGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVR- 171 (277)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHT----------------TT---TCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECC-
T ss_pred CCCEEEEECCcCCHHHHHHHHHh----------------CC---CcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEEC-
Confidence 34699999999999998876432 12 236888887542222221111 10 11123333
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
++.+. +|++++|++++. .|.. ..+|..-.+-|+|
T Consensus 172 --d~~~~-~~~~~~D~V~~~--------~~~~-----------------------------------~~~l~~~~~~L~p 205 (277)
T 1o54_A 172 --DISEG-FDEKDVDALFLD--------VPDP-----------------------------------WNYIDKCWEALKG 205 (277)
T ss_dssp --CGGGC-CSCCSEEEEEEC--------CSCG-----------------------------------GGTHHHHHHHEEE
T ss_pred --CHHHc-ccCCccCEEEEC--------CcCH-----------------------------------HHHHHHHHHHcCC
Confidence 33333 777899999982 2211 1367777888999
Q ss_pred CceEEEEeec
Q 017702 218 GGLMVLILAA 227 (367)
Q Consensus 218 GG~lvl~~~g 227 (367)
||++++....
T Consensus 206 gG~l~~~~~~ 215 (277)
T 1o54_A 206 GGRFATVCPT 215 (277)
T ss_dssp EEEEEEEESS
T ss_pred CCEEEEEeCC
Confidence 9999998864
|
| >2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00025 Score=64.41 Aligned_cols=101 Identities=14% Similarity=0.129 Sum_probs=61.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC----Cccccceeecc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL----PHARKYFAAGL 137 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l----~~~~~~f~~gv 137 (367)
...+|+|+|||+|..+..+.+.+ .| ..+++..|....-....-+.+ ...+-.|..+
T Consensus 96 ~~~~vLdiG~G~G~~~~~l~~~~----------------~~---~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~- 155 (258)
T 2pwy_A 96 PGMRVLEAGTGSGGLTLFLARAV----------------GE---KGLVESYEARPHHLAQAERNVRAFWQVENVRFHLG- 155 (258)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH----------------CT---TSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEES-
T ss_pred CCCEEEEECCCcCHHHHHHHHHh----------------CC---CCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEEC-
Confidence 34699999999999998876443 11 235777777532222211111 1111223333
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
++.+.-+|++++|++++. + |. ...+|+.-.+-|+|
T Consensus 156 --d~~~~~~~~~~~D~v~~~----~----~~-----------------------------------~~~~l~~~~~~L~~ 190 (258)
T 2pwy_A 156 --KLEEAELEEAAYDGVALD----L----ME-----------------------------------PWKVLEKAALALKP 190 (258)
T ss_dssp --CGGGCCCCTTCEEEEEEE----S----SC-----------------------------------GGGGHHHHHHHEEE
T ss_pred --chhhcCCCCCCcCEEEEC----C----cC-----------------------------------HHHHHHHHHHhCCC
Confidence 333333677899999982 2 21 01377888899999
Q ss_pred CceEEEEeec
Q 017702 218 GGLMVLILAA 227 (367)
Q Consensus 218 GG~lvl~~~g 227 (367)
||++++..+.
T Consensus 191 gG~l~~~~~~ 200 (258)
T 2pwy_A 191 DRFLVAYLPN 200 (258)
T ss_dssp EEEEEEEESC
T ss_pred CCEEEEEeCC
Confidence 9999998865
|
| >3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus} | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00035 Score=62.14 Aligned_cols=21 Identities=24% Similarity=0.216 Sum_probs=18.0
Q ss_pred HHHHHHHhhccCceEEEEeec
Q 017702 207 FLNARAEELVPGGLMVLILAA 227 (367)
Q Consensus 207 fL~~Ra~EL~pGG~lvl~~~g 227 (367)
+|+.-.+-|+|||++++....
T Consensus 136 ~l~~~~~~LkpgG~lv~~~~~ 156 (204)
T 3njr_A 136 LYDRLWEWLAPGTRIVANAVT 156 (204)
T ss_dssp HHHHHHHHSCTTCEEEEEECS
T ss_pred HHHHHHHhcCCCcEEEEEecC
Confidence 677777889999999998875
|
| >2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A* | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00014 Score=67.57 Aligned_cols=123 Identities=15% Similarity=0.182 Sum_probs=69.4
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC---CccccceeeccCc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL---PHARKYFAAGLPG 139 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l---~~~~~~f~~gvp~ 139 (367)
..+|+|+|||+|..++.+.... | ..+++..|....-....-++. ...+-.|..+.
T Consensus 110 ~~~vLDlG~GsG~~~~~la~~~-----------------~---~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d-- 167 (276)
T 2b3t_A 110 PCRILDLGTGTGAIALALASER-----------------P---DCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSD-- 167 (276)
T ss_dssp CCEEEEETCTTSHHHHHHHHHC-----------------T---TSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCS--
T ss_pred CCEEEEecCCccHHHHHHHHhC-----------------C---CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcc--
Confidence 4699999999999998776321 2 236788887532211111111 11122233333
Q ss_pred cccccCCCCCceeEEEeccccccccCCCc---cccCC-CCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhh
Q 017702 140 SFHSRLFPRSSIHFVHTSYALHWLSKVPK---EIVDP-CSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEEL 215 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alhWLs~~P~---~~~~~-~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL 215 (367)
+.+ .+|++++|+++|+-..+|... +. .+... ...++.. ......++..+++.-.+-|
T Consensus 168 -~~~-~~~~~~fD~Iv~npPy~~~~~-~~l~~~v~~~~p~~al~~----------------~~~g~~~~~~~l~~~~~~L 228 (276)
T 2b3t_A 168 -WFS-ALAGQQFAMIVSNPPYIDEQD-PHLQQGDVRFEPLTALVA----------------ADSGMADIVHIIEQSRNAL 228 (276)
T ss_dssp -TTG-GGTTCCEEEEEECCCCBCTTC-HHHHSSGGGSSCSTTTBC----------------HHHHTHHHHHHHHHHGGGE
T ss_pred -hhh-hcccCCccEEEECCCCCCccc-cccChhhhhcCcHHHHcC----------------CCcHHHHHHHHHHHHHHhc
Confidence 333 345789999999877777543 11 00000 0001100 0112245677999999999
Q ss_pred ccCceEEEEee
Q 017702 216 VPGGLMVLILA 226 (367)
Q Consensus 216 ~pGG~lvl~~~ 226 (367)
+|||++++...
T Consensus 229 kpgG~l~~~~~ 239 (276)
T 2b3t_A 229 VSGGFLLLEHG 239 (276)
T ss_dssp EEEEEEEEECC
T ss_pred CCCCEEEEEEC
Confidence 99999998753
|
| >2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A* | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00043 Score=64.71 Aligned_cols=98 Identities=8% Similarity=-0.020 Sum_probs=61.2
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC---ccc-cceeeccC
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP---HAR-KYFAAGLP 138 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~---~~~-~~f~~gvp 138 (367)
..+|+|+|||+|..|+.+.... + . +|+-.|+...-....-+++. -.. --|..+..
T Consensus 126 ~~~VLDlgcG~G~~~~~la~~~-----------------~---~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~ 184 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPIAVYG-----------------K---A-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDN 184 (278)
T ss_dssp TCEEEETTCTTTTTHHHHHHHT-----------------C---C-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCT
T ss_pred CCEEEEecccCCHHHHHHHHhC-----------------C---C-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCH
Confidence 4699999999999999886321 2 3 57888886432222222111 111 22555552
Q ss_pred ccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccC
Q 017702 139 GSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPG 218 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 218 (367)
..+.+++++|++++. .|... ..+|..-.+-|+||
T Consensus 185 ----~~~~~~~~fD~Vi~~--------~p~~~----------------------------------~~~l~~~~~~Lkpg 218 (278)
T 2frn_A 185 ----RDFPGENIADRILMG--------YVVRT----------------------------------HEFIPKALSIAKDG 218 (278)
T ss_dssp ----TTCCCCSCEEEEEEC--------CCSSG----------------------------------GGGHHHHHHHEEEE
T ss_pred ----HHhcccCCccEEEEC--------CchhH----------------------------------HHHHHHHHHHCCCC
Confidence 233347899999883 22110 13677777899999
Q ss_pred ceEEEEeec
Q 017702 219 GLMVLILAA 227 (367)
Q Consensus 219 G~lvl~~~g 227 (367)
|++++...+
T Consensus 219 G~l~~~~~~ 227 (278)
T 2frn_A 219 AIIHYHNTV 227 (278)
T ss_dssp EEEEEEEEE
T ss_pred eEEEEEEee
Confidence 999998887
|
| >1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A* | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00011 Score=65.84 Aligned_cols=100 Identities=18% Similarity=0.158 Sum_probs=58.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc--------cccce
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH--------ARKYF 133 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~--------~~~~f 133 (367)
...+|+|+|||+|..|..+.+.. .+ ..+|+-.|....-....-+.+.. .+-.+
T Consensus 77 ~~~~vLDiG~G~G~~~~~la~~~----------------~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~ 137 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFARMV----------------GC---TGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQL 137 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH----------------CT---TCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHHh----------------CC---CcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEE
Confidence 34799999999999998876432 11 23567777653221111111110 11223
Q ss_pred eeccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHH
Q 017702 134 AAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAE 213 (367)
Q Consensus 134 ~~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~ 213 (367)
..+. ......+.+++|++++...++.+ +..-.+
T Consensus 138 ~~~d---~~~~~~~~~~fD~i~~~~~~~~~--------------------------------------------~~~~~~ 170 (226)
T 1i1n_A 138 VVGD---GRMGYAEEAPYDAIHVGAAAPVV--------------------------------------------PQALID 170 (226)
T ss_dssp EESC---GGGCCGGGCCEEEEEECSBBSSC--------------------------------------------CHHHHH
T ss_pred EECC---cccCcccCCCcCEEEECCchHHH--------------------------------------------HHHHHH
Confidence 3333 22223346789999988776431 223347
Q ss_pred hhccCceEEEEeec
Q 017702 214 ELVPGGLMVLILAA 227 (367)
Q Consensus 214 EL~pGG~lvl~~~g 227 (367)
-|+|||+|++....
T Consensus 171 ~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 171 QLKPGGRLILPVGP 184 (226)
T ss_dssp TEEEEEEEEEEESC
T ss_pred hcCCCcEEEEEEec
Confidence 79999999998864
|
| >1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A* | Back alignment and structure |
|---|
Probab=97.54 E-value=9.1e-05 Score=67.06 Aligned_cols=21 Identities=24% Similarity=0.346 Sum_probs=17.7
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAVQ 82 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~ 82 (367)
...+|+|+|||+|..+..+.+
T Consensus 91 ~~~~vLdiG~G~G~~~~~la~ 111 (235)
T 1jg1_A 91 PGMNILEVGTGSGWNAALISE 111 (235)
T ss_dssp TTCCEEEECCTTSHHHHHHHH
T ss_pred CCCEEEEEeCCcCHHHHHHHH
Confidence 346999999999999988764
|
| >2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00033 Score=67.65 Aligned_cols=20 Identities=30% Similarity=0.534 Sum_probs=16.9
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAV 81 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~ 81 (367)
+..+|+|+|||+|..++.+.
T Consensus 50 ~~~~VLDiGcGtG~ls~~la 69 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAA 69 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHH
T ss_pred CcCEEEEcCCCccHHHHHHH
Confidence 34699999999999888665
|
| >3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A* | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00015 Score=68.91 Aligned_cols=112 Identities=14% Similarity=0.074 Sum_probs=62.1
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC-------Cccccce
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL-------PHARKYF 133 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l-------~~~~~~f 133 (367)
+++.+|+|+|||+|..+..+++. .+ .-+|+.-|+...-....-+.+ ...+--+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~-----------------~~---~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~ 153 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRH-----------------GT---VEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATV 153 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTC-----------------TT---CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhC-----------------CC---CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEE
Confidence 34579999999999998877521 11 226777776532111111111 1112234
Q ss_pred eeccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHH
Q 017702 134 AAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAE 213 (367)
Q Consensus 134 ~~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~ 213 (367)
..+....+-.. .+++++|+|++....++.. +..+. -..||+.-.+
T Consensus 154 ~~~D~~~~~~~-~~~~~fDvIi~d~~~~~~~--~~~l~--------------------------------~~~~l~~~~~ 198 (304)
T 3bwc_A 154 RVGDGLAFVRQ-TPDNTYDVVIIDTTDPAGP--ASKLF--------------------------------GEAFYKDVLR 198 (304)
T ss_dssp EESCHHHHHHS-SCTTCEEEEEEECC-----------C--------------------------------CHHHHHHHHH
T ss_pred EECcHHHHHHh-ccCCceeEEEECCCCcccc--chhhh--------------------------------HHHHHHHHHH
Confidence 44443333221 1578999999977666521 10000 0258888889
Q ss_pred hhccCceEEEEeec
Q 017702 214 ELVPGGLMVLILAA 227 (367)
Q Consensus 214 EL~pGG~lvl~~~g 227 (367)
-|+|||+|++....
T Consensus 199 ~LkpgG~lv~~~~~ 212 (304)
T 3bwc_A 199 ILKPDGICCNQGES 212 (304)
T ss_dssp HEEEEEEEEEEECC
T ss_pred hcCCCcEEEEecCC
Confidence 99999999988543
|
| >2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00016 Score=66.10 Aligned_cols=114 Identities=19% Similarity=0.232 Sum_probs=64.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHH---hhcC--------Cccc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTL---FKSL--------PHAR 130 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~l---f~~l--------~~~~ 130 (367)
+..+|+|+|||+|..++.+.... | ...|+--|....-.... ++.. ...+
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~-----------------~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~n 108 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAF-----------------P---EDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQN 108 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHS-----------------T---TSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTT
T ss_pred CCCEEEEEcCCCCHHHHHHHHhC-----------------C---CCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCc
Confidence 45799999999999998876321 2 23566666653211111 1100 1112
Q ss_pred cceeeccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHH
Q 017702 131 KYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNA 210 (367)
Q Consensus 131 ~~f~~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~ 210 (367)
-.|..+....+....++.+++|.++....=-|..... .+.++. ...+|+.
T Consensus 109 v~~~~~D~~~~l~~~~~~~~~d~v~~~~p~p~~k~~~-----------~~~r~~-------------------~~~~l~~ 158 (246)
T 2vdv_E 109 INVLRGNAMKFLPNFFEKGQLSKMFFCFPDPHFKQRK-----------HKARII-------------------TNTLLSE 158 (246)
T ss_dssp EEEEECCTTSCGGGTSCTTCEEEEEEESCCCC-----------------CSSCC-------------------CHHHHHH
T ss_pred EEEEeccHHHHHHHhccccccCEEEEECCCcccccch-----------hHHhhc-------------------cHHHHHH
Confidence 2345555444555668889999998644322211100 000010 0258888
Q ss_pred HHHhhccCceEEEEe
Q 017702 211 RAEELVPGGLMVLIL 225 (367)
Q Consensus 211 Ra~EL~pGG~lvl~~ 225 (367)
-++-|+|||+|++.+
T Consensus 159 ~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 159 YAYVLKEGGVVYTIT 173 (246)
T ss_dssp HHHHEEEEEEEEEEE
T ss_pred HHHHcCCCCEEEEEe
Confidence 889999999999865
|
| >3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=97.51 E-value=4.2e-05 Score=69.34 Aligned_cols=103 Identities=18% Similarity=0.185 Sum_probs=61.6
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHH---hhcCCc--cccceeecc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTL---FKSLPH--ARKYFAAGL 137 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~l---f~~l~~--~~~~f~~gv 137 (367)
..+|+|+|||+|..|+.+...+ .+ .-+|+-.|....-.... ++...- .+--|..|.
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~----------------~~---~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gd 117 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGL----------------AD---NTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSR 117 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHS----------------CT---TSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSC
T ss_pred CCCEEEEcCCchHHHHHHHHhC----------------CC---CCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcC
Confidence 4599999999999999887433 12 23677778764322211 222111 122344444
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
...+... ++++++|++|+.... .++..+|+.-.+-|+|
T Consensus 118 a~~~l~~-~~~~~fD~V~~d~~~-----------------------------------------~~~~~~l~~~~~~Lkp 155 (221)
T 3dr5_A 118 PLDVMSR-LANDSYQLVFGQVSP-----------------------------------------MDLKALVDAAWPLLRR 155 (221)
T ss_dssp HHHHGGG-SCTTCEEEEEECCCT-----------------------------------------TTHHHHHHHHHHHEEE
T ss_pred HHHHHHH-hcCCCcCeEEEcCcH-----------------------------------------HHHHHHHHHHHHHcCC
Confidence 3333222 246899999874210 1333577777889999
Q ss_pred CceEEEEee
Q 017702 218 GGLMVLILA 226 (367)
Q Consensus 218 GG~lvl~~~ 226 (367)
||++++...
T Consensus 156 GG~lv~dn~ 164 (221)
T 3dr5_A 156 GGALVLADA 164 (221)
T ss_dssp EEEEEETTT
T ss_pred CcEEEEeCC
Confidence 999998543
|
| >2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46 | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00048 Score=59.00 Aligned_cols=20 Identities=25% Similarity=0.175 Sum_probs=17.1
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAV 81 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~ 81 (367)
+..+|+|+|||+|..++.+.
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~ 50 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAV 50 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHH
T ss_pred CCCeEEEeCCCCCHHHHHHH
Confidence 34699999999999998765
|
| >1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A* | Back alignment and structure |
|---|
Probab=97.49 E-value=8.1e-05 Score=71.12 Aligned_cols=112 Identities=13% Similarity=0.151 Sum_probs=67.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC--------ccccce
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP--------HARKYF 133 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~--------~~~~~f 133 (367)
.+.+|+|+|||+|..+..+++. .+ .-+++.-|+...-....-+.++ ..+--+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~-----------------~~---~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~ 136 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKH-----------------PT---VEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVL 136 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTS-----------------TT---CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhc-----------------CC---CCEEEEEECCHHHHHHHHHHhHhhccccccCCceEE
Confidence 4579999999999998877521 11 2256676765321111111111 112234
Q ss_pred eeccCccccccCCCCCceeEEEecccccc-ccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHH
Q 017702 134 AAGLPGSFHSRLFPRSSIHFVHTSYALHW-LSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARA 212 (367)
Q Consensus 134 ~~gvp~SFy~~l~P~~svd~~~S~~alhW-Ls~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra 212 (367)
..+....|... +++++|+|++....|| ++..+..+ ....|++...
T Consensus 137 ~~~D~~~~l~~--~~~~fD~Ii~d~~~~~~~~~~~~~l--------------------------------~~~~~l~~~~ 182 (314)
T 1uir_A 137 VIDDARAYLER--TEERYDVVIIDLTDPVGEDNPARLL--------------------------------YTVEFYRLVK 182 (314)
T ss_dssp EESCHHHHHHH--CCCCEEEEEEECCCCBSTTCGGGGG--------------------------------SSHHHHHHHH
T ss_pred EEchHHHHHHh--cCCCccEEEECCCCcccccCcchhc--------------------------------cHHHHHHHHH
Confidence 55554444322 4689999999888777 22111111 0135888889
Q ss_pred HhhccCceEEEEeec
Q 017702 213 EELVPGGLMVLILAA 227 (367)
Q Consensus 213 ~EL~pGG~lvl~~~g 227 (367)
+-|+|||+|++....
T Consensus 183 ~~LkpgG~lv~~~~~ 197 (314)
T 1uir_A 183 AHLNPGGVMGMQTGM 197 (314)
T ss_dssp HTEEEEEEEEEEEEE
T ss_pred HhcCCCcEEEEEccC
Confidence 999999999998655
|
| >3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A* | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00027 Score=67.27 Aligned_cols=100 Identities=6% Similarity=-0.042 Sum_probs=61.5
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccch---HHHhhcCCccccceeecc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDF---NTLFKSLPHARKYFAAGL 137 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDF---n~lf~~l~~~~~~f~~gv 137 (367)
....+|+|+|||+|+.|..++... + ..+|+--|....-- ...++...-.+--|..|.
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA~~-----------------~---ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gD 180 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLSHV-----------------Y---GMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGD 180 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHHHT-----------------T---CCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESC
T ss_pred CCcCEEEEECCCccHHHHHHHHHc-----------------c---CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECc
Confidence 446899999999999887665321 1 22566666643111 111111111223455555
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
... +|.+++|++++... +| |...+|+.-.+-|+|
T Consensus 181 a~~-----l~d~~FDvV~~~a~------~~-----------------------------------d~~~~l~el~r~LkP 214 (298)
T 3fpf_A 181 ETV-----IDGLEFDVLMVAAL------AE-----------------------------------PKRRVFRNIHRYVDT 214 (298)
T ss_dssp GGG-----GGGCCCSEEEECTT------CS-----------------------------------CHHHHHHHHHHHCCT
T ss_pred hhh-----CCCCCcCEEEECCC------cc-----------------------------------CHHHHHHHHHHHcCC
Confidence 332 36789999998543 22 344688889999999
Q ss_pred CceEEEEee
Q 017702 218 GGLMVLILA 226 (367)
Q Consensus 218 GG~lvl~~~ 226 (367)
||+|++...
T Consensus 215 GG~Lvv~~~ 223 (298)
T 3fpf_A 215 ETRIIYRTY 223 (298)
T ss_dssp TCEEEEEEC
T ss_pred CcEEEEEcC
Confidence 999998763
|
| >1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7 | Back alignment and structure |
|---|
Probab=97.49 E-value=0.0001 Score=66.25 Aligned_cols=83 Identities=14% Similarity=0.093 Sum_probs=45.0
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC--------cccccee
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP--------HARKYFA 134 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~--------~~~~~f~ 134 (367)
..+|+|+|||+|..|..+.+.. ...+. .+ .-+|+-.|....-....-+.+. ..+-.|.
T Consensus 85 ~~~VLdiG~G~G~~~~~la~~~--------~~~~~---~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~ 150 (227)
T 1r18_A 85 GARILDVGSGSGYLTACFYRYI--------KAKGV---DA---DTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIV 150 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHH--------HHSCC---CT---TCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred CCEEEEECCCccHHHHHHHHhc--------ccccC---Cc---cCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEE
Confidence 4699999999999999876433 11000 11 1256776765321111111111 0112233
Q ss_pred eccCccccccCCCC-CceeEEEeccccccc
Q 017702 135 AGLPGSFHSRLFPR-SSIHFVHTSYALHWL 163 (367)
Q Consensus 135 ~gvp~SFy~~l~P~-~svd~~~S~~alhWL 163 (367)
.+. ... .+|+ +++|++++..++||+
T Consensus 151 ~~d---~~~-~~~~~~~fD~I~~~~~~~~~ 176 (227)
T 1r18_A 151 EGD---GRK-GYPPNAPYNAIHVGAAAPDT 176 (227)
T ss_dssp ESC---GGG-CCGGGCSEEEEEECSCBSSC
T ss_pred ECC---ccc-CCCcCCCccEEEECCchHHH
Confidence 333 223 3444 789999999998873
|
| >3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00015 Score=66.56 Aligned_cols=106 Identities=11% Similarity=0.077 Sum_probs=62.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHH---HhhcCCcc-ccceeecc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNT---LFKSLPHA-RKYFAAGL 137 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~---lf~~l~~~-~~~f~~gv 137 (367)
+..+|+|+|||+|..|+.+...+ ++ .-+|+--|+...-... .++...-. +--|..|.
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~----------------~~---~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d 123 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMAREL----------------PA---DGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGP 123 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTS----------------CT---TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESC
T ss_pred CCCEEEEecCCchHHHHHHHHhC----------------CC---CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC
Confidence 35799999999999999876322 11 2367777775322211 12211111 22345554
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
...+...+...+++|+|++.... .+...+|+.-.+-|+|
T Consensus 124 ~~~~l~~~~~~~~fD~V~~d~~~-----------------------------------------~~~~~~l~~~~~~Lkp 162 (248)
T 3tfw_A 124 ALQSLESLGECPAFDLIFIDADK-----------------------------------------PNNPHYLRWALRYSRP 162 (248)
T ss_dssp HHHHHHTCCSCCCCSEEEECSCG-----------------------------------------GGHHHHHHHHHHTCCT
T ss_pred HHHHHHhcCCCCCeEEEEECCch-----------------------------------------HHHHHHHHHHHHhcCC
Confidence 33333334334689999984311 1233478888899999
Q ss_pred CceEEEEeec
Q 017702 218 GGLMVLILAA 227 (367)
Q Consensus 218 GG~lvl~~~g 227 (367)
||++++...-
T Consensus 163 GG~lv~~~~~ 172 (248)
T 3tfw_A 163 GTLIIGDNVV 172 (248)
T ss_dssp TCEEEEECCS
T ss_pred CeEEEEeCCC
Confidence 9999887654
|
| >1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31 | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00069 Score=67.73 Aligned_cols=22 Identities=32% Similarity=0.344 Sum_probs=18.8
Q ss_pred CceEEeeecCCCCcccHHHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAVQN 83 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ 83 (367)
...+|+|+|||+|..++.+...
T Consensus 242 ~g~~VLDLGCGsG~la~~LA~~ 263 (433)
T 1u2z_A 242 KGDTFMDLGSGVGNCVVQAALE 263 (433)
T ss_dssp TTCEEEEESCTTSHHHHHHHHH
T ss_pred CCCEEEEeCCCcCHHHHHHHHH
Confidence 4579999999999999988753
|
| >2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46 | Back alignment and structure |
|---|
Probab=97.47 E-value=0.0001 Score=65.41 Aligned_cols=18 Identities=22% Similarity=0.058 Sum_probs=16.1
Q ss_pred eEEeeecCCCCcccHHHH
Q 017702 64 FKIADLGCSVGPNTLLAV 81 (367)
Q Consensus 64 ~~IaD~GCs~G~nT~~~~ 81 (367)
.+|+|+|||+|..++.++
T Consensus 56 ~~vLDlgcG~G~~~~~l~ 73 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEAL 73 (202)
T ss_dssp CEEEETTCTTCHHHHHHH
T ss_pred CeEEEeCCCcCHHHHHHH
Confidence 689999999999998765
|
| >3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00029 Score=65.90 Aligned_cols=106 Identities=15% Similarity=0.154 Sum_probs=63.1
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhc-C-----Cc--------
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKS-L-----PH-------- 128 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~-l-----~~-------- 128 (367)
..+|+|+|||+|..++.+... .. . +|+..|+++.+.-...+. . ..
T Consensus 80 ~~~vLDlG~G~G~~~~~~a~~-----------------~~---~-~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~ 138 (281)
T 3bzb_A 80 GKTVCELGAGAGLVSIVAFLA-----------------GA---D-QVVATDYPDPEILNSLESNIREHTANSCSSETVKR 138 (281)
T ss_dssp TCEEEETTCTTSHHHHHHHHT-----------------TC---S-EEEEEECSCHHHHHHHHHHHHTTCC----------
T ss_pred CCeEEEecccccHHHHHHHHc-----------------CC---C-EEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCC
Confidence 469999999999998866411 01 1 578888842222111111 1 00
Q ss_pred cccceeeccCccccccCC---CCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHH
Q 017702 129 ARKYFAAGLPGSFHSRLF---PRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDME 205 (367)
Q Consensus 129 ~~~~f~~gvp~SFy~~l~---P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~ 205 (367)
.+-.+....-+.....+. +++++|+|+++.++++.. +..
T Consensus 139 ~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~--------------------------------------~~~ 180 (281)
T 3bzb_A 139 ASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQ--------------------------------------AHD 180 (281)
T ss_dssp CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGG--------------------------------------GHH
T ss_pred CCeEEEEecCCCccHHHHhhccCCCCCEEEEeCcccChH--------------------------------------HHH
Confidence 011122122222222332 578999999988888733 344
Q ss_pred HHHHHHHHhhc---c--CceEEEEeec
Q 017702 206 SFLNARAEELV---P--GGLMVLILAA 227 (367)
Q Consensus 206 ~fL~~Ra~EL~---p--GG~lvl~~~g 227 (367)
.+|+.-.+-|+ | ||++++.+..
T Consensus 181 ~ll~~l~~~Lk~~~p~~gG~l~v~~~~ 207 (281)
T 3bzb_A 181 ALLRSVKMLLALPANDPTAVALVTFTH 207 (281)
T ss_dssp HHHHHHHHHBCCTTTCTTCEEEEEECC
T ss_pred HHHHHHHHHhcccCCCCCCEEEEEEEe
Confidence 57888888899 9 9998887654
|
| >2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A* | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00085 Score=63.55 Aligned_cols=25 Identities=12% Similarity=0.167 Sum_probs=20.4
Q ss_pred hHHHHHHHHHHhhccCceEEEEeec
Q 017702 203 DMESFLNARAEELVPGGLMVLILAA 227 (367)
Q Consensus 203 D~~~fL~~Ra~EL~pGG~lvl~~~g 227 (367)
.+..+|+.-.+-|+|||+|++..+.
T Consensus 149 l~~~~l~~a~r~LkpGG~~v~~~~~ 173 (290)
T 2xyq_A 149 FFTYLCGFIKQKLALGGSIAVKITE 173 (290)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEec
Confidence 3456788888999999999997765
|
| >2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00014 Score=65.50 Aligned_cols=103 Identities=17% Similarity=0.274 Sum_probs=59.7
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHH---hhcCCc-cccceeeccC
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTL---FKSLPH-ARKYFAAGLP 138 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~l---f~~l~~-~~~~f~~gvp 138 (367)
..+|+|+|||+|..++.+.+.. | ..+|+..|....-.... ++.... .+--+..+..
T Consensus 55 ~~~vLdiG~G~G~~~~~la~~~-----------------~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 114 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMAQAL-----------------P---EATIVSIERDERRYEEAHKHVKALGLESRIELLFGDA 114 (233)
T ss_dssp CSEEEEECCTTSHHHHHHHHHC-----------------T---TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCG
T ss_pred CCEEEEecCCCcHHHHHHHHHC-----------------C---CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCH
Confidence 4699999999999998776332 1 12567777653221111 111111 1122333332
Q ss_pred ccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccC
Q 017702 139 GSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPG 218 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 218 (367)
..+...+..++++|++++....+ ++..+|+.-.+-|+||
T Consensus 115 ~~~~~~~~~~~~fD~I~~~~~~~-----------------------------------------~~~~~l~~~~~~L~pg 153 (233)
T 2gpy_A 115 LQLGEKLELYPLFDVLFIDAAKG-----------------------------------------QYRRFFDMYSPMVRPG 153 (233)
T ss_dssp GGSHHHHTTSCCEEEEEEEGGGS-----------------------------------------CHHHHHHHHGGGEEEE
T ss_pred HHHHHhcccCCCccEEEECCCHH-----------------------------------------HHHHHHHHHHHHcCCC
Confidence 22211121257899999854422 3345888888999999
Q ss_pred ceEEEEee
Q 017702 219 GLMVLILA 226 (367)
Q Consensus 219 G~lvl~~~ 226 (367)
|++++...
T Consensus 154 G~lv~~~~ 161 (233)
T 2gpy_A 154 GLILSDNV 161 (233)
T ss_dssp EEEEEETT
T ss_pred eEEEEEcC
Confidence 99998754
|
| >1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46 | Back alignment and structure |
|---|
Probab=97.41 E-value=8e-05 Score=63.07 Aligned_cols=19 Identities=21% Similarity=0.017 Sum_probs=16.7
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017702 63 PFKIADLGCSVGPNTLLAV 81 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~ 81 (367)
..+|+|+|||+|..++.+.
T Consensus 42 ~~~vLD~GcG~G~~~~~l~ 60 (171)
T 1ws6_A 42 RGRFLDPFAGSGAVGLEAA 60 (171)
T ss_dssp CCEEEEETCSSCHHHHHHH
T ss_pred CCeEEEeCCCcCHHHHHHH
Confidence 4689999999999988776
|
| >2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46 | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00015 Score=62.43 Aligned_cols=20 Identities=25% Similarity=0.051 Sum_probs=17.1
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAV 81 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~ 81 (367)
...+|+|+|||+|..++.++
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~ 63 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAV 63 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHH
T ss_pred CCCCEEEeCCccCHHHHHHH
Confidence 34699999999999998765
|
| >1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38 | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00051 Score=65.50 Aligned_cols=125 Identities=14% Similarity=0.099 Sum_probs=67.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC---ccccceeeccC
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP---HARKYFAAGLP 138 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~---~~~~~f~~gvp 138 (367)
...+|+|+|||+|..|..+.+.. .+ .-+|+-.|....-...+-+.+. ..+-.+..+..
T Consensus 118 ~g~~VLDlg~G~G~~t~~la~~~----------------~~---~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~ 178 (315)
T 1ixk_A 118 PGEIVADMAAAPGGKTSYLAQLM----------------RN---DGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSS 178 (315)
T ss_dssp TTCEEEECCSSCSHHHHHHHHHT----------------TT---CSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCG
T ss_pred CCCEEEEeCCCCCHHHHHHHHHh----------------CC---CCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECCh
Confidence 34699999999999999887432 11 2367888876543333322221 11222444432
Q ss_pred ccccccCCCCCceeEEEecc---ccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhh
Q 017702 139 GSFHSRLFPRSSIHFVHTSY---ALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEEL 215 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~~---alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL 215 (367)
..+ ..+++++|.|++.. .+.-+.+.|... .. ..++.. ....+....+|+.-++-|
T Consensus 179 ~~~---~~~~~~fD~Il~d~Pcsg~g~~~~~p~~~--------------~~-~~~~~~----~~~~~~q~~~L~~~~~~L 236 (315)
T 1ixk_A 179 LHI---GELNVEFDKILLDAPCTGSGTIHKNPERK--------------WN-RTMDDI----KFCQGLQMRLLEKGLEVL 236 (315)
T ss_dssp GGG---GGGCCCEEEEEEECCTTSTTTCC-----------------------CCHHHH----HHHHHHHHHHHHHHHHHE
T ss_pred hhc---ccccccCCEEEEeCCCCCcccccCChhHh--------------hc-CCHHHH----HHHHHHHHHHHHHHHHhC
Confidence 222 11457899999831 121112222110 00 011111 223334567899999999
Q ss_pred ccCceEEEEeec
Q 017702 216 VPGGLMVLILAA 227 (367)
Q Consensus 216 ~pGG~lvl~~~g 227 (367)
+|||+|++++..
T Consensus 237 kpGG~lv~stcs 248 (315)
T 1ixk_A 237 KPGGILVYSTCS 248 (315)
T ss_dssp EEEEEEEEEESC
T ss_pred CCCCEEEEEeCC
Confidence 999999998765
|
| >3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00039 Score=74.44 Aligned_cols=107 Identities=11% Similarity=0.072 Sum_probs=67.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC----C----c-cccc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL----P----H-ARKY 132 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l----~----~-~~~~ 132 (367)
+..+|+|+|||+|..++.+.+.. .| ..+|+--|+...--...-+.+ . . .+-.
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g----------------~p---~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVe 781 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYP----------------TS---LQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSAT 781 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSC----------------CC---CCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhC----------------CC---CCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceE
Confidence 35799999999999998775211 12 236777777543222211111 0 0 1122
Q ss_pred eeeccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHH
Q 017702 133 FAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARA 212 (367)
Q Consensus 133 f~~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra 212 (367)
|..|. ..+.-++.+++|+|+++.++||+.+ .+...||+.-.
T Consensus 782 fiqGD---a~dLp~~d~sFDlVV~~eVLeHL~d------------------------------------p~l~~~L~eI~ 822 (950)
T 3htx_A 782 LYDGS---ILEFDSRLHDVDIGTCLEVIEHMEE------------------------------------DQACEFGEKVL 822 (950)
T ss_dssp EEESC---TTSCCTTSCSCCEEEEESCGGGSCH------------------------------------HHHHHHHHHHH
T ss_pred EEECc---hHhCCcccCCeeEEEEeCchhhCCh------------------------------------HHHHHHHHHHH
Confidence 33333 3444456799999999999999653 13345888889
Q ss_pred HhhccCceEEEEeec
Q 017702 213 EELVPGGLMVLILAA 227 (367)
Q Consensus 213 ~EL~pGG~lvl~~~g 227 (367)
+-|+|| .+++..+.
T Consensus 823 RvLKPG-~LIISTPN 836 (950)
T 3htx_A 823 SLFHPK-LLIVSTPN 836 (950)
T ss_dssp HTTCCS-EEEEEECB
T ss_pred HHcCCC-EEEEEecC
Confidence 999999 77777765
|
| >3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00039 Score=61.39 Aligned_cols=25 Identities=16% Similarity=0.094 Sum_probs=20.3
Q ss_pred hHHHHHHHHHHhhccCceEEEEeec
Q 017702 203 DMESFLNARAEELVPGGLMVLILAA 227 (367)
Q Consensus 203 D~~~fL~~Ra~EL~pGG~lvl~~~g 227 (367)
.....|+.-.+-|+|||.|++..+.
T Consensus 117 l~~~~l~~a~~~LkpGG~lv~k~~~ 141 (191)
T 3dou_A 117 IGQRVMEIAVRYLRNGGNVLLKQFQ 141 (191)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHccCCCEEEEEEcC
Confidence 3456777778899999999998875
|
| >1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A* | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00015 Score=68.72 Aligned_cols=111 Identities=12% Similarity=0.074 Sum_probs=60.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC-------Ccccccee
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL-------PHARKYFA 134 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l-------~~~~~~f~ 134 (367)
.+.+|+|+|||+|..+..+++. .+ .-+|+.-|+...-....-+.+ ...+--+.
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~-----------------~~---~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~ 149 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKH-----------------DS---VEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIV 149 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTS-----------------TT---CSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhc-----------------CC---CCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEE
Confidence 3579999999999999877521 11 225677776532111111111 11122344
Q ss_pred eccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHh
Q 017702 135 AGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEE 214 (367)
Q Consensus 135 ~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~E 214 (367)
.+....|... +++++|+|++...-+|... +..+ ....|++.-++-
T Consensus 150 ~~D~~~~l~~--~~~~fD~Ii~d~~~~~~~~-~~~l--------------------------------~~~~~l~~~~~~ 194 (296)
T 1inl_A 150 IANGAEYVRK--FKNEFDVIIIDSTDPTAGQ-GGHL--------------------------------FTEEFYQACYDA 194 (296)
T ss_dssp ESCHHHHGGG--CSSCEEEEEEEC-----------C--------------------------------CSHHHHHHHHHH
T ss_pred ECcHHHHHhh--CCCCceEEEEcCCCcccCc-hhhh--------------------------------hHHHHHHHHHHh
Confidence 5544333322 3578999999765555421 1000 113588888899
Q ss_pred hccCceEEEEeec
Q 017702 215 LVPGGLMVLILAA 227 (367)
Q Consensus 215 L~pGG~lvl~~~g 227 (367)
|+|||+|++....
T Consensus 195 LkpgG~lv~~~~~ 207 (296)
T 1inl_A 195 LKEDGVFSAETED 207 (296)
T ss_dssp EEEEEEEEEECCC
T ss_pred cCCCcEEEEEccC
Confidence 9999999998643
|
| >3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00018 Score=65.09 Aligned_cols=102 Identities=9% Similarity=0.067 Sum_probs=60.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHH---HhhcCCc-cccceeecc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNT---LFKSLPH-ARKYFAAGL 137 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~---lf~~l~~-~~~~f~~gv 137 (367)
+..+|+|+|||+|..|+.+... .| ..+|+--|+...-... .++.... .+--|..+.
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~-----------------~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d 130 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASI-----------------SD---DIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGN 130 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTT-----------------CT---TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESC
T ss_pred CCCEEEEEeCchhHHHHHHHHh-----------------CC---CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECC
Confidence 3479999999999999887621 12 2367777775322111 1111111 122345554
Q ss_pred Cccccc-cCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhc
Q 017702 138 PGSFHS-RLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELV 216 (367)
Q Consensus 138 p~SFy~-~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~ 216 (367)
...+.. .+ ++++|++++.. |. .++..+|+.-.+-|+
T Consensus 131 ~~~~~~~~~--~~~fD~V~~~~---~~--------------------------------------~~~~~~l~~~~~~Lk 167 (232)
T 3ntv_A 131 ALEQFENVN--DKVYDMIFIDA---AK--------------------------------------AQSKKFFEIYTPLLK 167 (232)
T ss_dssp GGGCHHHHT--TSCEEEEEEET---TS--------------------------------------SSHHHHHHHHGGGEE
T ss_pred HHHHHHhhc--cCCccEEEEcC---cH--------------------------------------HHHHHHHHHHHHhcC
Confidence 222211 11 68999999642 10 123458888889999
Q ss_pred cCceEEEEee
Q 017702 217 PGGLMVLILA 226 (367)
Q Consensus 217 pGG~lvl~~~ 226 (367)
|||+|++...
T Consensus 168 pgG~lv~d~~ 177 (232)
T 3ntv_A 168 HQGLVITDNV 177 (232)
T ss_dssp EEEEEEEECT
T ss_pred CCeEEEEeeC
Confidence 9999988544
|
| >3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A* | Back alignment and structure |
|---|
Probab=97.30 E-value=1.8e-05 Score=71.72 Aligned_cols=80 Identities=19% Similarity=0.056 Sum_probs=48.7
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC---Cc-cccceeecc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL---PH-ARKYFAAGL 137 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l---~~-~~~~f~~gv 137 (367)
...+|+|+|||+|..++.+.+. ..+|+-.|+...-....-+.+ .- .+-.|..+.
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~----------------------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d 135 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALT----------------------GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGD 135 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHT----------------------TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESC
T ss_pred CCCEEEECccccCHHHHHHHHc----------------------CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECC
Confidence 3479999999999999988631 014666666532222211111 11 122344443
Q ss_pred CccccccCCCCCceeEEEeccccccccCCC
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVP 167 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P 167 (367)
+. .+.+++++|+++++..+||.....
T Consensus 136 ---~~-~~~~~~~~D~v~~~~~~~~~~~~~ 161 (241)
T 3gdh_A 136 ---FL-LLASFLKADVVFLSPPWGGPDYAT 161 (241)
T ss_dssp ---HH-HHGGGCCCSEEEECCCCSSGGGGG
T ss_pred ---hH-HhcccCCCCEEEECCCcCCcchhh
Confidence 22 233678999999999999977544
|
| >2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54 | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00017 Score=65.79 Aligned_cols=22 Identities=14% Similarity=-0.055 Sum_probs=18.3
Q ss_pred CceEEeeecCCCCcccHHHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAVQN 83 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ 83 (367)
+..+|+|+|||+|..++.+...
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~ 86 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGAT 86 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHH
T ss_pred CCCEEEEeCCChhHHHHHHHHh
Confidence 3579999999999999887643
|
| >1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17 | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00043 Score=64.76 Aligned_cols=110 Identities=11% Similarity=0.071 Sum_probs=64.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHH---Hhh----cCCcccccee
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNT---LFK----SLPHARKYFA 134 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~---lf~----~l~~~~~~f~ 134 (367)
.+.+|+|+|||+|..+..+++. .+ .-+|..-|+-..--.. -|. .+...+--+.
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~-----------------~~---~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~ 134 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKH-----------------PS---VKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQ 134 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTC-----------------TT---CSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhC-----------------CC---CceEEEEECCHHHHHHHHHHhHhhccccCCCceEEE
Confidence 4679999999999988876521 11 1256666664211111 111 1112223355
Q ss_pred eccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHh
Q 017702 135 AGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEE 214 (367)
Q Consensus 135 ~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~E 214 (367)
.+....|... +++++|+|++....+|.. +..+ +. ..|++...+-
T Consensus 135 ~~D~~~~l~~--~~~~fD~Ii~d~~~~~~~--~~~l-------~~-------------------------~~~~~~~~~~ 178 (275)
T 1iy9_A 135 VDDGFMHIAK--SENQYDVIMVDSTEPVGP--AVNL-------FT-------------------------KGFYAGIAKA 178 (275)
T ss_dssp ESCSHHHHHT--CCSCEEEEEESCSSCCSC--CCCC-------ST-------------------------THHHHHHHHH
T ss_pred ECcHHHHHhh--CCCCeeEEEECCCCCCCc--chhh-------hH-------------------------HHHHHHHHHh
Confidence 5554444333 357899999976665521 1111 11 1488888899
Q ss_pred hccCceEEEEeec
Q 017702 215 LVPGGLMVLILAA 227 (367)
Q Consensus 215 L~pGG~lvl~~~g 227 (367)
|+|||+|++....
T Consensus 179 L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 179 LKEDGIFVAQTDN 191 (275)
T ss_dssp EEEEEEEEEECCC
T ss_pred cCCCcEEEEEcCC
Confidence 9999999998643
|
| >3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A* | Back alignment and structure |
|---|
Probab=97.24 E-value=9.6e-05 Score=65.98 Aligned_cols=106 Identities=11% Similarity=0.102 Sum_probs=60.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHH---HhhcCCcc-ccceeecc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNT---LFKSLPHA-RKYFAAGL 137 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~---lf~~l~~~-~~~f~~gv 137 (367)
+..+|+|+|||+|..|+.+.+.+ ++ .-+|+-.|+...-... .++..... +--+..+.
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~----------------~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d 118 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGL----------------SS---GGRVVTLEASEKHADIARSNIERANLNDRVEVRTGL 118 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTC----------------CS---SCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESC
T ss_pred CCCEEEEecCCccHHHHHHHHhC----------------CC---CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC
Confidence 35799999999999999876322 11 2367777775322211 11111111 12244444
Q ss_pred CccccccCCC--CCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhh
Q 017702 138 PGSFHSRLFP--RSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEEL 215 (367)
Q Consensus 138 p~SFy~~l~P--~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL 215 (367)
...+...+.. .+++|++++....+ +...+|+.-.+-|
T Consensus 119 ~~~~~~~~~~~~~~~fD~v~~d~~~~-----------------------------------------~~~~~l~~~~~~L 157 (223)
T 3duw_A 119 ALDSLQQIENEKYEPFDFIFIDADKQ-----------------------------------------NNPAYFEWALKLS 157 (223)
T ss_dssp HHHHHHHHHHTTCCCCSEEEECSCGG-----------------------------------------GHHHHHHHHHHTC
T ss_pred HHHHHHHHHhcCCCCcCEEEEcCCcH-----------------------------------------HHHHHHHHHHHhc
Confidence 2222222211 15799998743311 2335788888999
Q ss_pred ccCceEEEEeec
Q 017702 216 VPGGLMVLILAA 227 (367)
Q Consensus 216 ~pGG~lvl~~~g 227 (367)
+|||++++....
T Consensus 158 ~pgG~lv~~~~~ 169 (223)
T 3duw_A 158 RPGTVIIGDNVV 169 (223)
T ss_dssp CTTCEEEEESCS
T ss_pred CCCcEEEEeCCC
Confidence 999998886554
|
| >3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00023 Score=65.21 Aligned_cols=105 Identities=13% Similarity=0.163 Sum_probs=61.3
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccch---HHHhhcCCcc-ccceeeccC
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDF---NTLFKSLPHA-RKYFAAGLP 138 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDF---n~lf~~l~~~-~~~f~~gvp 138 (367)
+.+|+|+|||+|..|+.+...+ .+ .-+|+--|+...-. ...++..... +--|..|..
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~----------------~~---~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda 121 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLAL----------------PD---DGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPA 121 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTS----------------CT---TCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCH
T ss_pred cCEEEEeeCCcCHHHHHHHHhC----------------CC---CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 4699999999999999886332 11 23566666653211 1222222211 223444442
Q ss_pred ccccccCCC---CCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhh
Q 017702 139 GSFHSRLFP---RSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEEL 215 (367)
Q Consensus 139 ~SFy~~l~P---~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL 215 (367)
..+...+.. ++++|++++... + .++..+|+.-.+-|
T Consensus 122 ~~~l~~~~~~~~~~~fD~V~~d~~-------~----------------------------------~~~~~~l~~~~~~L 160 (242)
T 3r3h_A 122 LDTLHSLLNEGGEHQFDFIFIDAD-------K----------------------------------TNYLNYYELALKLV 160 (242)
T ss_dssp HHHHHHHHHHHCSSCEEEEEEESC-------G----------------------------------GGHHHHHHHHHHHE
T ss_pred HHHHHHHhhccCCCCEeEEEEcCC-------h----------------------------------HHhHHHHHHHHHhc
Confidence 222222211 479999987532 0 13445788888999
Q ss_pred ccCceEEEEeec
Q 017702 216 VPGGLMVLILAA 227 (367)
Q Consensus 216 ~pGG~lvl~~~g 227 (367)
+|||+|++....
T Consensus 161 kpGG~lv~d~~~ 172 (242)
T 3r3h_A 161 TPKGLIAIDNIF 172 (242)
T ss_dssp EEEEEEEEECSS
T ss_pred CCCeEEEEECCc
Confidence 999999986553
|
| >2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00012 Score=66.36 Aligned_cols=21 Identities=19% Similarity=0.284 Sum_probs=18.0
Q ss_pred ceEEeeecCCCCcccHHHHHH
Q 017702 63 PFKIADLGCSVGPNTLLAVQN 83 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ 83 (367)
..+|+|+|||+|..|..+...
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~ 81 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASA 81 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHH
T ss_pred cCEEEEEeCCCCHHHHHHHHh
Confidence 469999999999999988743
|
| >1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A* | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00039 Score=65.20 Aligned_cols=107 Identities=15% Similarity=0.140 Sum_probs=61.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHH---HhhcC-----------C
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNT---LFKSL-----------P 127 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~---lf~~l-----------~ 127 (367)
.+.+|+|+|||+|..+..+++. + .-+++.-|+-..--.. .| .+ .
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~------------------~---~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~ 132 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQH------------------D---VDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGK 132 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTS------------------C---CSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTC
T ss_pred CCCeEEEEcCCcCHHHHHHHhC------------------C---CCEEEEEECCHHHHHHHHHHH-hhccccccccccCC
Confidence 4579999999999998877511 1 1256666664211111 11 11 1
Q ss_pred ccccceeeccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHH
Q 017702 128 HARKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESF 207 (367)
Q Consensus 128 ~~~~~f~~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~f 207 (367)
..+--+..+....|... ++++|+|++....+|-. +..+ ....|
T Consensus 133 ~~~v~~~~~D~~~~l~~---~~~fD~Ii~d~~~~~~~--~~~l--------------------------------~~~~~ 175 (281)
T 1mjf_A 133 HEKAKLTIGDGFEFIKN---NRGFDVIIADSTDPVGP--AKVL--------------------------------FSEEF 175 (281)
T ss_dssp CSSEEEEESCHHHHHHH---CCCEEEEEEECCCCC-------T--------------------------------TSHHH
T ss_pred CCcEEEEECchHHHhcc---cCCeeEEEECCCCCCCc--chhh--------------------------------hHHHH
Confidence 11223444544444333 57899999976655511 1100 01358
Q ss_pred HHHHHHhhccCceEEEEeec
Q 017702 208 LNARAEELVPGGLMVLILAA 227 (367)
Q Consensus 208 L~~Ra~EL~pGG~lvl~~~g 227 (367)
++..++-|+|||+|++....
T Consensus 176 l~~~~~~L~pgG~lv~~~~~ 195 (281)
T 1mjf_A 176 YRYVYDALNNPGIYVTQAGS 195 (281)
T ss_dssp HHHHHHHEEEEEEEEEEEEE
T ss_pred HHHHHHhcCCCcEEEEEcCC
Confidence 88888999999999998654
|
| >3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00054 Score=63.79 Aligned_cols=124 Identities=10% Similarity=-0.022 Sum_probs=64.8
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC---ccccceeeccC
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP---HARKYFAAGLP 138 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~---~~~~~f~~gvp 138 (367)
...+|+|+|||+|..|..+.+.. . . .-+|+-.|....-...+-+.+. ..+-.+..+..
T Consensus 83 ~g~~VLDlgaG~G~~t~~la~~~--------~--------~---~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~ 143 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHLAQLM--------K--------N---KGTIVAVEISKTRTKALKSNINRMGVLNTIIINADM 143 (274)
T ss_dssp TTCEEEETTCTTCHHHHHHHHHT--------T--------T---CSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCH
T ss_pred CcCEEEEeCCCccHHHHHHHHHc--------C--------C---CCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCCh
Confidence 34699999999999999876432 0 1 1357777775433222222211 11122333332
Q ss_pred ccccccC-CCCCceeEEEecc---ccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHh
Q 017702 139 GSFHSRL-FPRSSIHFVHTSY---ALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEE 214 (367)
Q Consensus 139 ~SFy~~l-~P~~svd~~~S~~---alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~E 214 (367)
..+-..+ .+.+++|+|++.. .+..+.+.| .|+ ..-......+...+|+.-.+-
T Consensus 144 ~~~~~~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p---------~~~--------------~~~~~~~~~~~~~~l~~~~~~ 200 (274)
T 3ajd_A 144 RKYKDYLLKNEIFFDKILLDAPCSGNIIKDKNR---------NVS--------------EEDIKYCSLRQKELIDIGIDL 200 (274)
T ss_dssp HHHHHHHHHTTCCEEEEEEEECCC-----------------------------------HHHHTGGGTCHHHHHHHHHHH
T ss_pred HhcchhhhhccccCCEEEEcCCCCCCcccccCC---------CCC--------------HHHHHHHHHHHHHHHHHHHHh
Confidence 2111100 0257899998742 112222211 011 011112234567899999999
Q ss_pred hccCceEEEEeec
Q 017702 215 LVPGGLMVLILAA 227 (367)
Q Consensus 215 L~pGG~lvl~~~g 227 (367)
|+|||+|++++..
T Consensus 201 LkpgG~lv~stcs 213 (274)
T 3ajd_A 201 LKKDGELVYSTCS 213 (274)
T ss_dssp EEEEEEEEEEESC
T ss_pred CCCCCEEEEEECC
Confidence 9999999998875
|
| >3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00017 Score=64.27 Aligned_cols=105 Identities=10% Similarity=0.091 Sum_probs=59.9
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHH---HhhcCCcc-ccceeeccC
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNT---LFKSLPHA-RKYFAAGLP 138 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~---lf~~l~~~-~~~f~~gvp 138 (367)
..+|+|+|||+|..|+.+.+.+ .+ ..+|+.-|....-... .++..... +-.|..+..
T Consensus 65 ~~~vLdiG~G~G~~~~~la~~~----------------~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 125 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSAIAMGLAL----------------PK---DGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPA 125 (225)
T ss_dssp CSEEEEECCTTSHHHHHHHTTC----------------CT---TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCH
T ss_pred CCEEEEeCCcchHHHHHHHHhC----------------CC---CCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCH
Confidence 4699999999999999886322 11 2357777765322111 12111111 122444432
Q ss_pred ccccccCCCC---CceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhh
Q 017702 139 GSFHSRLFPR---SSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEEL 215 (367)
Q Consensus 139 ~SFy~~l~P~---~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL 215 (367)
..+...+... +++|++++.. | ..+...+|+.-.+-|
T Consensus 126 ~~~~~~~~~~~~~~~fD~v~~~~---~--------------------------------------~~~~~~~l~~~~~~L 164 (225)
T 3tr6_A 126 KDTLAELIHAGQAWQYDLIYIDA---D--------------------------------------KANTDLYYEESLKLL 164 (225)
T ss_dssp HHHHHHHHTTTCTTCEEEEEECS---C--------------------------------------GGGHHHHHHHHHHHE
T ss_pred HHHHHHhhhccCCCCccEEEECC---C--------------------------------------HHHHHHHHHHHHHhc
Confidence 2222222111 7899998532 1 013445788888999
Q ss_pred ccCceEEEEeec
Q 017702 216 VPGGLMVLILAA 227 (367)
Q Consensus 216 ~pGG~lvl~~~g 227 (367)
+|||+|++....
T Consensus 165 ~pgG~lv~~~~~ 176 (225)
T 3tr6_A 165 REGGLIAVDNVL 176 (225)
T ss_dssp EEEEEEEEECSS
T ss_pred CCCcEEEEeCCC
Confidence 999999986553
|
| >1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A* | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00028 Score=64.87 Aligned_cols=105 Identities=12% Similarity=0.185 Sum_probs=60.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHH---HhhcCCc-cccceeecc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNT---LFKSLPH-ARKYFAAGL 137 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~---lf~~l~~-~~~~f~~gv 137 (367)
++.+|+|+|||+|..|+.+...+ ++ ..+|+.-|....-... .++...- .+--|..|.
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~----------------~~---~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gd 139 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAI----------------PE---DGKILAMDINKENYELGLPVIKKAGVDHKIDFREGP 139 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHS----------------CT---TCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESC
T ss_pred CcCEEEEeCCCcCHHHHHHHHhC----------------CC---CCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECC
Confidence 35699999999999999887432 11 2357777775322111 1111111 112244443
Q ss_pred CccccccCC----CCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHH
Q 017702 138 PGSFHSRLF----PRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAE 213 (367)
Q Consensus 138 p~SFy~~l~----P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~ 213 (367)
...+...+. +++++|++++... . .+...+|+.-.+
T Consensus 140 a~~~l~~l~~~~~~~~~fD~V~~d~~--------~---------------------------------~~~~~~l~~~~~ 178 (247)
T 1sui_A 140 ALPVLDEMIKDEKNHGSYDFIFVDAD--------K---------------------------------DNYLNYHKRLID 178 (247)
T ss_dssp HHHHHHHHHHSGGGTTCBSEEEECSC--------S---------------------------------TTHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCCEEEEEEcCc--------h---------------------------------HHHHHHHHHHHH
Confidence 222222221 2678999998421 0 123357777778
Q ss_pred hhccCceEEEEee
Q 017702 214 ELVPGGLMVLILA 226 (367)
Q Consensus 214 EL~pGG~lvl~~~ 226 (367)
-|+|||++++...
T Consensus 179 ~LkpGG~lv~d~~ 191 (247)
T 1sui_A 179 LVKVGGVIGYDNT 191 (247)
T ss_dssp HBCTTCCEEEECT
T ss_pred hCCCCeEEEEecC
Confidence 9999999998653
|
| >2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A* | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0013 Score=59.94 Aligned_cols=20 Identities=20% Similarity=0.110 Sum_probs=17.5
Q ss_pred eEEeeecCCCCcccHHHHHH
Q 017702 64 FKIADLGCSVGPNTLLAVQN 83 (367)
Q Consensus 64 ~~IaD~GCs~G~nT~~~~~~ 83 (367)
.+|+|+|||+|..|..+.+.
T Consensus 83 ~~VLDiG~GtG~~t~~la~~ 102 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRDL 102 (236)
T ss_dssp SEEEEECCTTSHHHHHHHHH
T ss_pred CEEEEEeCCCCHHHHHHHHh
Confidence 59999999999999987643
|
| >2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A* | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0029 Score=61.88 Aligned_cols=121 Identities=13% Similarity=0.180 Sum_probs=64.5
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCcccc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSFH 142 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SFy 142 (367)
..+|+|+|||+|..++.+.+.. . + ..+++-.|+-..-.... .+--+..+ ++.
T Consensus 40 ~~~vLD~gcGtG~~~~~~~~~~--------~--------~---~~~i~gvDi~~~~~~~a------~~~~~~~~---D~~ 91 (421)
T 2ih2_A 40 GGRVLEPACAHGPFLRAFREAH--------G--------T---AYRFVGVEIDPKALDLP------PWAEGILA---DFL 91 (421)
T ss_dssp TCEEEEETCTTCHHHHHHHHHH--------C--------S---CSEEEEEESCTTTCCCC------TTEEEEES---CGG
T ss_pred CCEEEECCCCChHHHHHHHHHh--------C--------C---CCeEEEEECCHHHHHhC------CCCcEEeC---Chh
Confidence 4599999999999888776432 0 1 22566666643211110 11112222 233
Q ss_pred ccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHH------HhhHHHHHHHHHHhhc
Q 017702 143 SRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQY------KNDMESFLNARAEELV 216 (367)
Q Consensus 143 ~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~------~~D~~~fL~~Ra~EL~ 216 (367)
. ..+.+++|+|+++=-....... ..++ .+..++..+.|.... ...+..|++.-.+-|+
T Consensus 92 ~-~~~~~~fD~Ii~NPPy~~~~~~---------~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk 155 (421)
T 2ih2_A 92 L-WEPGEAFDLILGNPPYGIVGEA---------SKYP------IHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLK 155 (421)
T ss_dssp G-CCCSSCEEEEEECCCCCCBSCT---------TTCS------BCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEE
T ss_pred h-cCccCCCCEEEECcCccCcccc---------cccc------cccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhC
Confidence 2 3356789999994222111110 0000 001233443333211 1134578999999999
Q ss_pred cCceEEEEeec
Q 017702 217 PGGLMVLILAA 227 (367)
Q Consensus 217 pGG~lvl~~~g 227 (367)
|||++++.++.
T Consensus 156 ~~G~~~~i~p~ 166 (421)
T 2ih2_A 156 PGGVLVFVVPA 166 (421)
T ss_dssp EEEEEEEEEEG
T ss_pred CCCEEEEEECh
Confidence 99999999875
|
| >3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae} | Back alignment and structure |
|---|
Probab=97.12 E-value=0.006 Score=55.78 Aligned_cols=20 Identities=15% Similarity=0.255 Sum_probs=17.8
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAV 81 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~ 81 (367)
+..+|+|+|||||..++.++
T Consensus 21 ~g~~VlDIGtGsG~l~i~la 40 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLL 40 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHH
T ss_pred CCCEEEEECCchHHHHHHHH
Confidence 34899999999999999886
|
| >3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00077 Score=65.00 Aligned_cols=114 Identities=13% Similarity=0.056 Sum_probs=64.7
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc---cccceeeccC
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH---ARKYFAAGLP 138 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~---~~~~f~~gvp 138 (367)
...+|+|+|||+|..++.+.... .| ...++-.|....--...-+++.. ..--|..+.
T Consensus 203 ~~~~vLD~gcGsG~~~ie~a~~~----------------~~---~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D- 262 (354)
T 3tma_A 203 PGMRVLDPFTGSGTIALEAASTL----------------GP---TSPVYAGDLDEKRLGLAREAALASGLSWIRFLRAD- 262 (354)
T ss_dssp TTCCEEESSCTTSHHHHHHHHHH----------------CT---TSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECC-
T ss_pred CCCEEEeCCCCcCHHHHHHHHhh----------------CC---CceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCC-
Confidence 35789999999999988876432 01 23466667653222111111110 111233333
Q ss_pred ccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccC
Q 017702 139 GSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPG 218 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 218 (367)
+.+-..|..++|+++++-..+|.. . .. .+.......+++.-.+-|+||
T Consensus 263 --~~~~~~~~~~~D~Ii~npPyg~r~--~--------------------~~--------~~~~~~~~~~~~~~~~~Lkpg 310 (354)
T 3tma_A 263 --ARHLPRFFPEVDRILANPPHGLRL--G--------------------RK--------EGLFHLYWDFLRGALALLPPG 310 (354)
T ss_dssp --GGGGGGTCCCCSEEEECCCSCC--------------------------C--------HHHHHHHHHHHHHHHHTSCTT
T ss_pred --hhhCccccCCCCEEEECCCCcCcc--C--------------------Cc--------ccHHHHHHHHHHHHHHhcCCC
Confidence 333334556789999965444311 0 00 122334467898889999999
Q ss_pred ceEEEEeec
Q 017702 219 GLMVLILAA 227 (367)
Q Consensus 219 G~lvl~~~g 227 (367)
|++++.+..
T Consensus 311 G~l~i~t~~ 319 (354)
T 3tma_A 311 GRVALLTLR 319 (354)
T ss_dssp CEEEEEESC
T ss_pred cEEEEEeCC
Confidence 999998754
|
| >2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A* | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00038 Score=65.34 Aligned_cols=108 Identities=11% Similarity=0.078 Sum_probs=64.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC-------cccccee
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP-------HARKYFA 134 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~-------~~~~~f~ 134 (367)
.+.+|+|+|||+|..+..+.+. .| .-++...|+-..-....-+.++ ..+--+.
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~-----------------~~---~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~ 137 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKY-----------------KS---VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVF 137 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTC-----------------TT---CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHc-----------------CC---CCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEE
Confidence 4579999999999998877511 12 2256777764321111111122 1122345
Q ss_pred eccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhH--HHHHHHHH
Q 017702 135 AGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDM--ESFLNARA 212 (367)
Q Consensus 135 ~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~--~~fL~~Ra 212 (367)
.+....|.... ++++|+|++....+|. |. .++ ..|++...
T Consensus 138 ~~D~~~~l~~~--~~~fD~Ii~d~~~~~~---~~---------------------------------~~l~~~~~l~~~~ 179 (283)
T 2i7c_A 138 IEDASKFLENV--TNTYDVIIVDSSDPIG---PA---------------------------------ETLFNQNFYEKIY 179 (283)
T ss_dssp ESCHHHHHHHC--CSCEEEEEEECCCTTT---GG---------------------------------GGGSSHHHHHHHH
T ss_pred ECChHHHHHhC--CCCceEEEEcCCCCCC---cc---------------------------------hhhhHHHHHHHHH
Confidence 55544443322 6789999997665552 11 011 35889999
Q ss_pred HhhccCceEEEEeec
Q 017702 213 EELVPGGLMVLILAA 227 (367)
Q Consensus 213 ~EL~pGG~lvl~~~g 227 (367)
+-|+|||+|++....
T Consensus 180 ~~L~pgG~lv~~~~~ 194 (283)
T 2i7c_A 180 NALKPNGYCVAQCES 194 (283)
T ss_dssp HHEEEEEEEEEECCC
T ss_pred HhcCCCcEEEEECCC
Confidence 999999999987643
|
| >1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0008 Score=66.85 Aligned_cols=126 Identities=16% Similarity=0.154 Sum_probs=71.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc--cccceeeccCc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH--ARKYFAAGLPG 139 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~--~~~~f~~gvp~ 139 (367)
...+|+|+|||+|..|..+.+.. + .-+|+-+|....-...+-+.+.. ....+..+...
T Consensus 246 ~g~~VLDlgaG~G~~t~~la~~~-----------------~---~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~ 305 (429)
T 1sqg_A 246 NGEHILDLCAAPGGKTTHILEVA-----------------P---EAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGR 305 (429)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHC-----------------T---TCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTT
T ss_pred CcCeEEEECCCchHHHHHHHHHc-----------------C---CCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchh
Confidence 34699999999999999886432 1 13678888865444443333211 11223333322
Q ss_pred cccccCCCCCceeEEEe---ccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhc
Q 017702 140 SFHSRLFPRSSIHFVHT---SYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELV 216 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S---~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~ 216 (367)
.+- ..++++++|.|++ ++....+.+.|.... ..++.++ ....+....+|+.-.+-|+
T Consensus 306 ~~~-~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~--------------~~~~~~~-----~~l~~~q~~~L~~a~~~Lk 365 (429)
T 1sqg_A 306 YPS-QWCGEQQFDRILLDAPCSATGVIRRHPDIKW--------------LRRDRDI-----PELAQLQSEILDAIWPHLK 365 (429)
T ss_dssp CTH-HHHTTCCEEEEEEECCCCCGGGTTTCTTHHH--------------HCCTTHH-----HHHHHHHHHHHHHHGGGEE
T ss_pred hch-hhcccCCCCEEEEeCCCCcccccCCCcchhh--------------cCCHHHH-----HHHHHHHHHHHHHHHHhcC
Confidence 221 1145688999997 334444444443110 0111111 1222334578888889999
Q ss_pred cCceEEEEeec
Q 017702 217 PGGLMVLILAA 227 (367)
Q Consensus 217 pGG~lvl~~~g 227 (367)
|||+|++++..
T Consensus 366 pGG~lvystcs 376 (429)
T 1sqg_A 366 TGGTLVYATCS 376 (429)
T ss_dssp EEEEEEEEESC
T ss_pred CCCEEEEEECC
Confidence 99999998865
|
| >2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17 | Back alignment and structure |
|---|
Probab=97.09 E-value=0.00038 Score=66.61 Aligned_cols=107 Identities=14% Similarity=0.147 Sum_probs=60.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC-------cccccee
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP-------HARKYFA 134 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~-------~~~~~f~ 134 (367)
.+.+|+|+|||+|..+..++.. .| ..+|+.-|+...-....-+.++ ..+--+.
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~-----------------~~---~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~ 167 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKH-----------------ES---VEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLF 167 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTC-----------------TT---CCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHc-----------------CC---CCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEE
Confidence 4579999999999999877521 12 2367777775321111111121 1122344
Q ss_pred eccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhH--HHHHHHHH
Q 017702 135 AGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDM--ESFLNARA 212 (367)
Q Consensus 135 ~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~--~~fL~~Ra 212 (367)
.+....|... +++++|+|++...-+| .|. +++ ..|++...
T Consensus 168 ~~D~~~~l~~--~~~~fD~Ii~d~~~~~---~~~---------------------------------~~l~t~~~l~~~~ 209 (314)
T 2b2c_A 168 CGDGFEFLKN--HKNEFDVIITDSSDPV---GPA---------------------------------ESLFGQSYYELLR 209 (314)
T ss_dssp CSCHHHHHHH--CTTCEEEEEECCC-------------------------------------------------HHHHHH
T ss_pred EChHHHHHHh--cCCCceEEEEcCCCCC---Ccc---------------------------------hhhhHHHHHHHHH
Confidence 4444343332 5689999999665443 111 011 35888889
Q ss_pred HhhccCceEEEEee
Q 017702 213 EELVPGGLMVLILA 226 (367)
Q Consensus 213 ~EL~pGG~lvl~~~ 226 (367)
+-|+|||+|++...
T Consensus 210 ~~LkpgG~lv~~~~ 223 (314)
T 2b2c_A 210 DALKEDGILSSQGE 223 (314)
T ss_dssp HHEEEEEEEEEECC
T ss_pred hhcCCCeEEEEECC
Confidence 99999999998763
|
| >3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A* | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0066 Score=55.30 Aligned_cols=20 Identities=15% Similarity=0.094 Sum_probs=17.8
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAV 81 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~ 81 (367)
+..+|+|+|||||..++.++
T Consensus 15 ~g~~VlDIGtGsG~l~i~la 34 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELV 34 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHH
Confidence 34799999999999999886
|
| >2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0012 Score=66.08 Aligned_cols=126 Identities=11% Similarity=0.046 Sum_probs=68.6
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC---CccccceeeccCc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL---PHARKYFAAGLPG 139 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l---~~~~~~f~~gvp~ 139 (367)
..+|+|+|||+|..|..+.+.+ . . .-+|+-+|....-...+-+.+ ...+-.+..+...
T Consensus 260 g~~VLDlgaG~G~~t~~la~~~--------~--------~---~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~ 320 (450)
T 2yxl_A 260 GETVVDLAAAPGGKTTHLAELM--------K--------N---KGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDAR 320 (450)
T ss_dssp TCEEEESSCTTCHHHHHHHHHT--------T--------T---CSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTT
T ss_pred cCEEEEeCCCccHHHHHHHHHc--------C--------C---CCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChh
Confidence 4699999999999999886433 0 1 136788888653333222222 1112223334322
Q ss_pred cccccCCCCCceeEEEe---ccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhc
Q 017702 140 SFHSRLFPRSSIHFVHT---SYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELV 216 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S---~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~ 216 (367)
.+- .-++++++|.|++ ++.+.-+.+.|.... ..++.+. ......-..+|+.-++-|+
T Consensus 321 ~~~-~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~--------------~~~~~~~-----~~l~~~q~~iL~~a~~~Lk 380 (450)
T 2yxl_A 321 KAP-EIIGEEVADKVLLDAPCTSSGTIGKNPELRW--------------RLREDKI-----NEMSQLQRELLESAARLVK 380 (450)
T ss_dssp CCS-SSSCSSCEEEEEEECCCCCGGGTTTSTTHHH--------------HCCTTSH-----HHHHHHHHHHHHHHHTTEE
T ss_pred hcc-hhhccCCCCEEEEcCCCCCCeeeccChhhhh--------------hCCHHHH-----HHHHHHHHHHHHHHHHhcC
Confidence 221 1145578999997 233333333332110 0000001 1112222568888889999
Q ss_pred cCceEEEEeec
Q 017702 217 PGGLMVLILAA 227 (367)
Q Consensus 217 pGG~lvl~~~g 227 (367)
|||+|+.++..
T Consensus 381 pGG~lvy~tcs 391 (450)
T 2yxl_A 381 PGGRLLYTTCS 391 (450)
T ss_dssp EEEEEEEEESC
T ss_pred CCcEEEEEeCC
Confidence 99999988875
|
| >2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A* | Back alignment and structure |
|---|
Probab=97.07 E-value=0.00028 Score=67.11 Aligned_cols=111 Identities=16% Similarity=0.098 Sum_probs=62.5
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC-------ccccce
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP-------HARKYF 133 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~-------~~~~~f 133 (367)
+.+.+|+|+|||+|..++.+++. .+ ..+++.-|+-..-....-+.++ ..+--+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~-----------------~~---~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v 153 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKH-----------------PS---VESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTL 153 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTC-----------------TT---CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHc-----------------CC---CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEE
Confidence 34579999999999999877521 12 2367777765321111111111 112234
Q ss_pred eeccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHH
Q 017702 134 AAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAE 213 (367)
Q Consensus 134 ~~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~ 213 (367)
..+....|... +++++|+|++....+|- |... -....|++...+
T Consensus 154 ~~~Da~~~l~~--~~~~fD~Ii~d~~~~~~---~~~~-------------------------------l~~~~~l~~~~~ 197 (304)
T 2o07_A 154 HVGDGFEFMKQ--NQDAFDVIITDSSDPMG---PAES-------------------------------LFKESYYQLMKT 197 (304)
T ss_dssp EESCHHHHHHT--CSSCEEEEEEECC---------------------------------------------CHHHHHHHH
T ss_pred EECcHHHHHhh--CCCCceEEEECCCCCCC---cchh-------------------------------hhHHHHHHHHHh
Confidence 45544333332 46889999997665551 1100 011258888889
Q ss_pred hhccCceEEEEeec
Q 017702 214 ELVPGGLMVLILAA 227 (367)
Q Consensus 214 EL~pGG~lvl~~~g 227 (367)
-|+|||+|++....
T Consensus 198 ~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 198 ALKEDGVLCCQGEC 211 (304)
T ss_dssp HEEEEEEEEEEEEC
T ss_pred ccCCCeEEEEecCC
Confidence 99999999998754
|
| >1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00035 Score=67.46 Aligned_cols=110 Identities=17% Similarity=0.128 Sum_probs=63.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC-------cccccee
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP-------HARKYFA 134 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~-------~~~~~f~ 134 (367)
.+.+|+|+|||+|..++.+++. .| ..+|+.-|+...-....-+.++ ..+--+.
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~-----------------~~---~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~ 179 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARH-----------------AS---IEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLV 179 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTC-----------------TT---CCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHc-----------------CC---CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEE
Confidence 4579999999999998877521 12 2367777775322111111111 1122345
Q ss_pred eccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHh
Q 017702 135 AGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEE 214 (367)
Q Consensus 135 ~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~E 214 (367)
.+....|... ++++++|+|++...-+|- .+..+ ....|++...+-
T Consensus 180 ~~D~~~~l~~-~~~~~fDlIi~d~~~p~~--~~~~l--------------------------------~~~~~l~~~~~~ 224 (334)
T 1xj5_A 180 IGDGVAFLKN-AAEGSYDAVIVDSSDPIG--PAKEL--------------------------------FEKPFFQSVARA 224 (334)
T ss_dssp ESCHHHHHHT-SCTTCEEEEEECCCCTTS--GGGGG--------------------------------GSHHHHHHHHHH
T ss_pred ECCHHHHHHh-ccCCCccEEEECCCCccC--cchhh--------------------------------hHHHHHHHHHHh
Confidence 5543333222 356799999996654331 00000 123588888999
Q ss_pred hccCceEEEEee
Q 017702 215 LVPGGLMVLILA 226 (367)
Q Consensus 215 L~pGG~lvl~~~ 226 (367)
|+|||+|++...
T Consensus 225 LkpgG~lv~~~~ 236 (334)
T 1xj5_A 225 LRPGGVVCTQAE 236 (334)
T ss_dssp EEEEEEEEEECC
T ss_pred cCCCcEEEEecC
Confidence 999999998743
|
| >2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A* | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00077 Score=64.17 Aligned_cols=20 Identities=30% Similarity=0.418 Sum_probs=17.5
Q ss_pred ceEEeeecCCCCcccHHHHH
Q 017702 63 PFKIADLGCSVGPNTLLAVQ 82 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~ 82 (367)
..+|+|+|||+|..|..+.+
T Consensus 83 g~~VLDlGcG~G~~s~~la~ 102 (305)
T 2p41_A 83 EGKVVDLGCGRGGWSYYCGG 102 (305)
T ss_dssp CEEEEEETCTTSHHHHHHHT
T ss_pred CCEEEEEcCCCCHHHHHHHh
Confidence 47999999999999988763
|
| >2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0015 Score=66.16 Aligned_cols=126 Identities=13% Similarity=0.156 Sum_probs=72.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC---ccccceeeccC
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP---HARKYFAAGLP 138 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~---~~~~~f~~gvp 138 (367)
...+|+|+|||+|..|..+.+.+ .+ .-+|+-+|....-...+-+++. ..+-.+..+..
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~----------------~~---~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~ 177 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARM----------------NN---EGAILANEFSASRVKVLHANISRCGISNVALTHFDG 177 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHT----------------TT---CSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCS
T ss_pred CCCEEEEeCCCCCHHHHHHHHhC----------------CC---CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCH
Confidence 34799999999999999887433 11 2268888886544333333321 11222444443
Q ss_pred ccccccCCCCCceeEEEe---ccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhh
Q 017702 139 GSFHSRLFPRSSIHFVHT---SYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEEL 215 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S---~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL 215 (367)
..+-. .+++++|.|++ ++...-+.+.|.... .-.++.. ....+.-..+|..-++-|
T Consensus 178 ~~~~~--~~~~~fD~Il~D~PcSg~G~~~~~pd~~~---------------~~~~~~~----~~l~~~q~~iL~~a~~~L 236 (479)
T 2frx_A 178 RVFGA--AVPEMFDAILLDAPCSGEGVVRKDPDALK---------------NWSPESN----QEIAATQRELIDSAFHAL 236 (479)
T ss_dssp TTHHH--HSTTCEEEEEEECCCCCGGGGGTCTTSSS---------------SCCHHHH----HHHHHHHHHHHHHHHHHE
T ss_pred HHhhh--hccccCCEEEECCCcCCcccccCCHHHHh---------------hcCHhHH----HHHHHHHHHHHHHHHHhc
Confidence 33211 14578999998 333333344443211 0112221 122223356888888999
Q ss_pred ccCceEEEEeec
Q 017702 216 VPGGLMVLILAA 227 (367)
Q Consensus 216 ~pGG~lvl~~~g 227 (367)
||||+||.++..
T Consensus 237 kpGG~LvysTcs 248 (479)
T 2frx_A 237 RPGGTLVYSTCT 248 (479)
T ss_dssp EEEEEEEEEESC
T ss_pred CCCCEEEEeccc
Confidence 999999998875
|
| >3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.00044 Score=62.97 Aligned_cols=105 Identities=12% Similarity=0.088 Sum_probs=60.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHH---hhcCCcc-ccceeecc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTL---FKSLPHA-RKYFAAGL 137 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~l---f~~l~~~-~~~f~~gv 137 (367)
++.+|+|+|||+|..|+.+...+ ++ .-+++-.|....-.... ++...-. +--+..|.
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~----------------~~---~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd 130 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSI----------------PD---DGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESD 130 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHS----------------CT---TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhC----------------CC---CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC
Confidence 35699999999999999887432 11 22566666643211111 1111111 12244443
Q ss_pred CccccccCC----CCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHH
Q 017702 138 PGSFHSRLF----PRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAE 213 (367)
Q Consensus 138 p~SFy~~l~----P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~ 213 (367)
...+...+. +++++|++++.. |. .+...+|+.-.+
T Consensus 131 a~~~l~~l~~~~~~~~~fD~I~~d~---~~--------------------------------------~~~~~~l~~~~~ 169 (237)
T 3c3y_A 131 AMLALDNLLQGQESEGSYDFGFVDA---DK--------------------------------------PNYIKYHERLMK 169 (237)
T ss_dssp HHHHHHHHHHSTTCTTCEEEEEECS---CG--------------------------------------GGHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCCcCEEEECC---ch--------------------------------------HHHHHHHHHHHH
Confidence 222222221 357899999741 10 134457888888
Q ss_pred hhccCceEEEEee
Q 017702 214 ELVPGGLMVLILA 226 (367)
Q Consensus 214 EL~pGG~lvl~~~ 226 (367)
-|+|||++++...
T Consensus 170 ~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 170 LVKVGGIVAYDNT 182 (237)
T ss_dssp HEEEEEEEEEECT
T ss_pred hcCCCeEEEEecC
Confidence 9999999998654
|
| >2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A* | Back alignment and structure |
|---|
Probab=96.99 E-value=0.00052 Score=65.77 Aligned_cols=108 Identities=11% Similarity=0.073 Sum_probs=63.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc-------ccccee
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH-------ARKYFA 134 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~-------~~~~f~ 134 (367)
.+.+|+|+|||+|..+..+.+. .| ..+++.-|+...-....-+.++. .+--+.
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~-----------------~~---~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~ 175 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKY-----------------KS---VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVF 175 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTC-----------------TT---CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHc-----------------CC---CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEE
Confidence 4579999999999998877521 12 23677777753221111111221 122344
Q ss_pred eccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhH--HHHHHHHH
Q 017702 135 AGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDM--ESFLNARA 212 (367)
Q Consensus 135 ~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~--~~fL~~Ra 212 (367)
.+....|... +++++|+|++...-+| -|. .++ ..|++.-.
T Consensus 176 ~~D~~~~l~~--~~~~fDvIi~d~~~p~---~~~---------------------------------~~l~~~~~l~~~~ 217 (321)
T 2pt6_A 176 IEDASKFLEN--VTNTYDVIIVDSSDPI---GPA---------------------------------ETLFNQNFYEKIY 217 (321)
T ss_dssp ESCHHHHHHH--CCSCEEEEEEECCCSS---SGG---------------------------------GGGSSHHHHHHHH
T ss_pred EccHHHHHhh--cCCCceEEEECCcCCC---Ccc---------------------------------hhhhHHHHHHHHH
Confidence 5543333222 3678999999754333 110 011 35888888
Q ss_pred HhhccCceEEEEeec
Q 017702 213 EELVPGGLMVLILAA 227 (367)
Q Consensus 213 ~EL~pGG~lvl~~~g 227 (367)
+-|+|||+|++....
T Consensus 218 ~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 218 NALKPNGYCVAQCES 232 (321)
T ss_dssp HHEEEEEEEEEEECC
T ss_pred HhcCCCcEEEEEcCC
Confidence 999999999998643
|
| >3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str} | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0042 Score=57.32 Aligned_cols=20 Identities=35% Similarity=0.351 Sum_probs=17.8
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAV 81 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~ 81 (367)
+.-+|+|+|||+|..++.+.
T Consensus 21 ~g~~VlDIGtGsG~l~i~la 40 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAV 40 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHH
T ss_pred CCCEEEEECCccHHHHHHHH
Confidence 34799999999999999886
|
| >3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A* | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0013 Score=66.40 Aligned_cols=126 Identities=13% Similarity=0.103 Sum_probs=70.1
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCcc--ccceeeccCc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHA--RKYFAAGLPG 139 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~--~~~f~~gvp~ 139 (367)
...+|+|+|||+|..|+.+.+.+ .+ .-+|+-+|+...-...+-+++... .-.+..+...
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA~~~----------------~~---~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~ 161 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLAARM----------------GG---KGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPR 161 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHT----------------TT---CSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHH
T ss_pred CCCEEEEEcCCcCHHHHHHHHhC----------------CC---CCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHH
Confidence 35799999999999999887433 11 226888888654433333332110 1223344432
Q ss_pred cccccCCCCCceeEEEe---ccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhc
Q 017702 140 SFHSRLFPRSSIHFVHT---SYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELV 216 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S---~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~ 216 (367)
.+-. ++++++|.|++ ++..--+.+.|... + ..++..+ ....+....+|..-.+-|+
T Consensus 162 ~l~~--~~~~~FD~Il~D~PcSg~G~~rr~pd~~-------------~-~~~~~~~-----~~l~~~Q~~iL~~a~~~Lk 220 (464)
T 3m6w_A 162 ALAE--AFGTYFHRVLLDAPCSGEGMFRKDREAA-------------R-HWGPSAP-----KRMAEVQKALLAQASRLLG 220 (464)
T ss_dssp HHHH--HHCSCEEEEEEECCCCCGGGTTTCTTSG-------------G-GCCTTHH-----HHHHHHHHHHHHHHHTTEE
T ss_pred Hhhh--hccccCCEEEECCCcCCccccccChHHh-------------h-hcCHHHH-----HHHHHHHHHHHHHHHHhcC
Confidence 2211 13578999996 12222222233211 1 1111111 1222344678999999999
Q ss_pred cCceEEEEeec
Q 017702 217 PGGLMVLILAA 227 (367)
Q Consensus 217 pGG~lvl~~~g 227 (367)
|||+||.++..
T Consensus 221 pGG~LvysTCs 231 (464)
T 3m6w_A 221 PGGVLVYSTCT 231 (464)
T ss_dssp EEEEEEEEESC
T ss_pred CCcEEEEEecc
Confidence 99999998765
|
| >2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1 | Back alignment and structure |
|---|
Probab=96.92 E-value=0.00041 Score=62.00 Aligned_cols=20 Identities=30% Similarity=0.308 Sum_probs=17.4
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAV 81 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~ 81 (367)
+..+|+|+|||+|..|+.+.
T Consensus 69 ~~~~vLdiG~G~G~~~~~la 88 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALA 88 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHH
T ss_pred CCCEEEEEcCCccHHHHHHH
Confidence 34699999999999998876
|
| >3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0018 Score=60.24 Aligned_cols=100 Identities=12% Similarity=0.082 Sum_probs=61.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC---CccccceeeccC
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL---PHARKYFAAGLP 138 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l---~~~~~~f~~gvp 138 (367)
+.-+|+|+|||+|..|+.+.... + .-+|+-.|+...-....-+++ .-.+..|..|..
T Consensus 119 ~~~~VLDlgcG~G~~s~~la~~~-----------------~---~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~ 178 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPLAKYS-----------------K---PKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADN 178 (272)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHT-----------------C---CSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCG
T ss_pred CCCEEEEecCcCCHHHHHHHHhC-----------------C---CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECCh
Confidence 34699999999999999886332 1 125777777532222221111 111233666654
Q ss_pred ccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccC
Q 017702 139 GSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPG 218 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 218 (367)
..+ .. .+++|++++.. |. +...+|..-.+.|+||
T Consensus 179 ~~~-~~---~~~~D~Vi~d~--------p~----------------------------------~~~~~l~~~~~~Lkpg 212 (272)
T 3a27_A 179 RDV-EL---KDVADRVIMGY--------VH----------------------------------KTHKFLDKTFEFLKDR 212 (272)
T ss_dssp GGC-CC---TTCEEEEEECC--------CS----------------------------------SGGGGHHHHHHHEEEE
T ss_pred HHc-Cc---cCCceEEEECC--------cc----------------------------------cHHHHHHHHHHHcCCC
Confidence 433 11 57899998742 21 1113666667889999
Q ss_pred ceEEEEeec
Q 017702 219 GLMVLILAA 227 (367)
Q Consensus 219 G~lvl~~~g 227 (367)
|++++.+..
T Consensus 213 G~l~~s~~~ 221 (272)
T 3a27_A 213 GVIHYHETV 221 (272)
T ss_dssp EEEEEEEEE
T ss_pred CEEEEEEcC
Confidence 999998886
|
| >3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A* | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0008 Score=62.98 Aligned_cols=80 Identities=14% Similarity=0.017 Sum_probs=46.1
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccc--hHHHh-hcCCccccceeecc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDND--FNTLF-KSLPHARKYFAAGL 137 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~ND--Fn~lf-~~l~~~~~~f~~gv 137 (367)
+.+-+|+|+|||.|+.|+.++.. .| .-+++..|.-..- |-.-+ ..+.. ..-|....
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~-----------------~p---~a~y~a~DId~~~le~a~~~l~~~g~-~~~~~v~D 189 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGL-----------------PA---ETVYIASDIDARLVGFVDEALTRLNV-PHRTNVAD 189 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTC-----------------CT---TCEEEEEESBHHHHHHHHHHHHHTTC-CEEEEECC
T ss_pred CCCceeeeeccCccHHHHHHHhh-----------------CC---CCEEEEEeCCHHHHHHHHHHHHhcCC-CceEEEee
Confidence 44789999999999999988621 23 3366666664211 11100 00110 01111111
Q ss_pred CccccccCCCCCceeEEEeccccccccC
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSK 165 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~ 165 (367)
+-.-.|+...|++.++=++|-|.+
T Consensus 190 ----~~~~~p~~~~DvaL~lkti~~Le~ 213 (281)
T 3lcv_B 190 ----LLEDRLDEPADVTLLLKTLPCLET 213 (281)
T ss_dssp ----TTTSCCCSCCSEEEETTCHHHHHH
T ss_pred ----ecccCCCCCcchHHHHHHHHHhhh
Confidence 112237789999999999999864
|
| >2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0012 Score=61.58 Aligned_cols=20 Identities=30% Similarity=0.489 Sum_probs=17.3
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAV 81 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~ 81 (367)
...+|+|+|||+|..|..+.
T Consensus 74 ~g~~VLDlGcGtG~~s~~la 93 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAA 93 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHH
T ss_pred CCCEEEEeCcCCCHHHHHHH
Confidence 35799999999999998776
|
| >2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A* | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0019 Score=60.54 Aligned_cols=20 Identities=30% Similarity=0.468 Sum_probs=17.4
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAV 81 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~ 81 (367)
...+|+|+|||+|..|..+.
T Consensus 82 ~g~~VLDlGcGtG~~s~~la 101 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAA 101 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHH
T ss_pred CCCEEEEeccCCCHHHHHHH
Confidence 45799999999999998776
|
| >2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0017 Score=58.37 Aligned_cols=98 Identities=16% Similarity=0.222 Sum_probs=57.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC---Cc-cccceeecc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL---PH-ARKYFAAGL 137 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l---~~-~~~~f~~gv 137 (367)
...+|+|+|||+|..++.+.+. . . +++..|....-....-+.+ .- .+-.+..
T Consensus 91 ~~~~vldiG~G~G~~~~~l~~~----------~-----------~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~-- 146 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLSEV----------A-----------G-EVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFN-- 146 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH----------S-----------S-EEEEECSCHHHHHHHHHHHHHTTCCTTEEEEC--
T ss_pred CCCEEEEeCCCccHHHHHHHHh----------C-----------C-EEEEEecCHHHHHHHHHHHHHcCCCCcEEEEE--
Confidence 3469999999999999877632 0 1 4666676532221111111 10 1112222
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
+++.+..++++++|++++. .|. ...+|+.-.+-|+|
T Consensus 147 -~d~~~~~~~~~~~D~v~~~--------~~~-----------------------------------~~~~l~~~~~~L~~ 182 (248)
T 2yvl_A 147 -VDFKDAEVPEGIFHAAFVD--------VRE-----------------------------------PWHYLEKVHKSLME 182 (248)
T ss_dssp -SCTTTSCCCTTCBSEEEEC--------SSC-----------------------------------GGGGHHHHHHHBCT
T ss_pred -cChhhcccCCCcccEEEEC--------CcC-----------------------------------HHHHHHHHHHHcCC
Confidence 2333333367889999982 121 01256777788999
Q ss_pred CceEEEEeec
Q 017702 218 GGLMVLILAA 227 (367)
Q Consensus 218 GG~lvl~~~g 227 (367)
||++++....
T Consensus 183 gG~l~~~~~~ 192 (248)
T 2yvl_A 183 GAPVGFLLPT 192 (248)
T ss_dssp TCEEEEEESS
T ss_pred CCEEEEEeCC
Confidence 9999998875
|
| >3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.00044 Score=62.59 Aligned_cols=25 Identities=24% Similarity=0.312 Sum_probs=19.4
Q ss_pred hHHHHHHHHHHhhccCceEEEEeec
Q 017702 203 DMESFLNARAEELVPGGLMVLILAA 227 (367)
Q Consensus 203 D~~~fL~~Ra~EL~pGG~lvl~~~g 227 (367)
++..+|+.-.+-|+|||++++....
T Consensus 160 ~~~~~l~~~~~~LkpgG~lv~~~~~ 184 (232)
T 3cbg_A 160 NYPRYYEIGLNLLRRGGLMVIDNVL 184 (232)
T ss_dssp GHHHHHHHHHHTEEEEEEEEEECTT
T ss_pred HHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 3445778888999999999986553
|
| >3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0026 Score=64.35 Aligned_cols=20 Identities=30% Similarity=0.534 Sum_probs=16.4
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAV 81 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~ 81 (367)
+..+|+|+|||+|..++.+.
T Consensus 158 ~~~~VLDiGcGtG~la~~la 177 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAA 177 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHH
T ss_pred CCCEEEEecCcccHHHHHHH
Confidence 34799999999999877554
|
| >2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51 | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0039 Score=59.92 Aligned_cols=27 Identities=22% Similarity=0.253 Sum_probs=22.8
Q ss_pred HhhHHHHHHHHHHhhccCceEEEEeec
Q 017702 201 KNDMESFLNARAEELVPGGLMVLILAA 227 (367)
Q Consensus 201 ~~D~~~fL~~Ra~EL~pGG~lvl~~~g 227 (367)
.+|+..+|+.-.+-|+|||.++++...
T Consensus 248 ~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 248 FDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp HHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred HHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 356778999999999999998888865
|
| >3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca} | Back alignment and structure |
|---|
Probab=96.71 E-value=0.00036 Score=61.75 Aligned_cols=19 Identities=16% Similarity=0.135 Sum_probs=16.9
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017702 63 PFKIADLGCSVGPNTLLAV 81 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~ 81 (367)
..+|+|+|||+|..|+.+.
T Consensus 57 ~~~vLdiG~G~G~~~~~la 75 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFA 75 (210)
T ss_dssp CSEEEEESCGGGHHHHHHH
T ss_pred CCEEEEEcCCccHHHHHHH
Confidence 4699999999999998876
|
| >3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium} | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0026 Score=63.95 Aligned_cols=125 Identities=10% Similarity=0.083 Sum_probs=72.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC---ccccceeeccC
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP---HARKYFAAGLP 138 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~---~~~~~f~~gvp 138 (367)
...+|+|+|||+|..|+.+.+.+ .+ .-+|+-+|+...-...+-+++. ..+-.+..+.+
T Consensus 105 ~g~~VLDlcaGpGgkt~~lA~~~----------------~~---~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da 165 (456)
T 3m4x_A 105 PGEKVLDLCAAPGGKSTQLAAQM----------------KG---KGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAP 165 (456)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHH----------------TT---CSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCH
T ss_pred CCCEEEEECCCcCHHHHHHHHHc----------------CC---CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCH
Confidence 34799999999999999887544 11 2268888886544333333321 11223444443
Q ss_pred ccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHH----HHHHHHHhhHHHHHHHHHHh
Q 017702 139 GSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVR----AYSTQYKNDMESFLNARAEE 214 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~----~y~~Q~~~D~~~fL~~Ra~E 214 (367)
..+-. .+++++|.|++ ++|+.-... + ...|+... ............+|..-.+-
T Consensus 166 ~~l~~--~~~~~FD~Il~--------DaPCSg~G~----~--------rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~ 223 (456)
T 3m4x_A 166 AELVP--HFSGFFDRIVV--------DAPCSGEGM----F--------RKDPNAIKEWTEESPLYCQKRQQEILSSAIKM 223 (456)
T ss_dssp HHHHH--HHTTCEEEEEE--------ECCCCCGGG----T--------TTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHT
T ss_pred HHhhh--hccccCCEEEE--------CCCCCCccc----c--------ccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHh
Confidence 33321 13578999987 455432110 0 01222221 11223334445789999999
Q ss_pred hccCceEEEEeec
Q 017702 215 LVPGGLMVLILAA 227 (367)
Q Consensus 215 L~pGG~lvl~~~g 227 (367)
|+|||+||.++..
T Consensus 224 LkpGG~LvYsTCs 236 (456)
T 3m4x_A 224 LKNKGQLIYSTCT 236 (456)
T ss_dssp EEEEEEEEEEESC
T ss_pred cCCCcEEEEEEee
Confidence 9999999998875
|
| >4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0041 Score=61.27 Aligned_cols=112 Identities=16% Similarity=0.095 Sum_probs=62.9
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC--ccccceeeccCcc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP--HARKYFAAGLPGS 140 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~--~~~~~f~~gvp~S 140 (367)
..+|+|+|||+|..|+.+... .. . |+-.|+...-....-+++. ....-+..+.-..
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~-----------------ga---~--V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~ 272 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARK-----------------GA---Y--ALAVDKDLEALGVLDQAALRLGLRVDIRHGEALP 272 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHT-----------------TC---E--EEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHH
T ss_pred CCeEEEcccchhHHHHHHHHc-----------------CC---e--EEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHH
Confidence 469999999999999988631 12 2 6666765322221111110 0011123333222
Q ss_pred ccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCce
Q 017702 141 FHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGL 220 (367)
Q Consensus 141 Fy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~ 220 (367)
+...+ + +.+|+|++. .|. +.++. . -.....+|+..++..-.+-|+|||+
T Consensus 273 ~l~~~-~-~~fD~Ii~d--------pP~---------f~~~~-------~-----~~~~~~~~~~~ll~~a~~~LkpGG~ 321 (393)
T 4dmg_A 273 TLRGL-E-GPFHHVLLD--------PPT---------LVKRP-------E-----ELPAMKRHLVDLVREALRLLAEEGF 321 (393)
T ss_dssp HHHTC-C-CCEEEEEEC--------CCC---------CCSSG-------G-----GHHHHHHHHHHHHHHHHHTEEEEEE
T ss_pred HHHHh-c-CCCCEEEEC--------CCc---------CCCCH-------H-----HHHHHHHHHHHHHHHHHHhcCCCCE
Confidence 22222 3 349999973 222 11110 0 1234566788899999999999999
Q ss_pred EEEEeec
Q 017702 221 MVLILAA 227 (367)
Q Consensus 221 lvl~~~g 227 (367)
|++....
T Consensus 322 Lv~~s~s 328 (393)
T 4dmg_A 322 LWLSSCS 328 (393)
T ss_dssp EEEEECC
T ss_pred EEEEECC
Confidence 9966654
|
| >2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45 | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0077 Score=57.72 Aligned_cols=126 Identities=10% Similarity=0.085 Sum_probs=68.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC--ccccceeeccCc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP--HARKYFAAGLPG 139 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~--~~~~~f~~gvp~ 139 (367)
...+|+|.|||+|..++.+.+.+- ... .. ..+++-.|+-..-....-..+. ....-+..|.
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~--------~~~----~~---~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D-- 192 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLE--------LKG----DV---DVHASGVDVDDLLISLALVGADLQRQKMTLLHQD-- 192 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHH--------TTS----SC---EEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESC--
T ss_pred CCCEEEeCCCCccHHHHHHHHHHH--------Hhc----CC---CceEEEEECCHHHHHHHHHHHHhCCCCceEEECC--
Confidence 468999999999999988775441 100 01 3578888875322111111110 0011222232
Q ss_pred cccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHH-HHHHHHHHhhccC
Q 017702 140 SFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDME-SFLNARAEELVPG 218 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~-~fL~~Ra~EL~pG 218 (367)
+.. ..+...+|+|+++-.++|...-. ....-.+...+| ..|.. .|+..-.+-|+||
T Consensus 193 -~l~-~~~~~~fD~Ii~NPPfg~~~~~~--~~~~~~~~~~~g-------------------~~~~~~~~l~~~~~~Lk~g 249 (344)
T 2f8l_A 193 -GLA-NLLVDPVDVVISDLPVGYYPDDE--NAKTFELCREEG-------------------HSFAHFLFIEQGMRYTKPG 249 (344)
T ss_dssp -TTS-CCCCCCEEEEEEECCCSEESCHH--HHTTSTTCCSSS-------------------CEEHHHHHHHHHHHTEEEE
T ss_pred -CCC-ccccCCccEEEECCCCCCcCchh--hhhhccccCCCC-------------------cchHHHHHHHHHHHHhCCC
Confidence 222 23567899999998877643210 000000000111 01222 4888888999999
Q ss_pred ceEEEEeec
Q 017702 219 GLMVLILAA 227 (367)
Q Consensus 219 G~lvl~~~g 227 (367)
|++++.++.
T Consensus 250 G~~~~v~p~ 258 (344)
T 2f8l_A 250 GYLFFLVPD 258 (344)
T ss_dssp EEEEEEEEG
T ss_pred CEEEEEECc
Confidence 999999865
|
| >3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A* | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0011 Score=61.27 Aligned_cols=81 Identities=15% Similarity=0.044 Sum_probs=45.0
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC--CccccceeeccC
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL--PHARKYFAAGLP 138 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l--~~~~~~f~~gvp 138 (367)
..+-+|+|+|||+|+.++.++. ...+...|+...--+.+=..+ ...+.-|..+.
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~~-----------------------~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D- 159 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYERG-----------------------IASVWGCDIHQGLGDVITPFAREKDWDFTFALQD- 159 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHTT-----------------------CSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECC-
T ss_pred CCCCeEEEecCCccHHHHHhcc-----------------------CCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEee-
Confidence 3578999999999999997751 124455555421100000000 00011112221
Q ss_pred ccccccCCCCCceeEEEeccccccccCCCc
Q 017702 139 GSFHSRLFPRSSIHFVHTSYALHWLSKVPK 168 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~~alhWLs~~P~ 168 (367)
+-...|+.+.|++.++=++|-|.+-..
T Consensus 160 ---~~~~~~~~~~DvvLllk~lh~LE~q~~ 186 (253)
T 3frh_A 160 ---VLCAPPAEAGDLALIFKLLPLLEREQA 186 (253)
T ss_dssp ---TTTSCCCCBCSEEEEESCHHHHHHHST
T ss_pred ---cccCCCCCCcchHHHHHHHHHhhhhch
Confidence 122335679999999999999876554
|
| >1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A* | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0082 Score=58.51 Aligned_cols=29 Identities=10% Similarity=0.083 Sum_probs=24.6
Q ss_pred HHHhhHHHHHHHHHHhhccCceEEEEeec
Q 017702 199 QYKNDMESFLNARAEELVPGGLMVLILAA 227 (367)
Q Consensus 199 Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g 227 (367)
...+++..++..-.+-|+|||.|+++...
T Consensus 299 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 299 RAYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp HHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 34567788999999999999999988865
|
| >4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A* | Back alignment and structure |
|---|
Probab=96.48 E-value=0.0077 Score=62.89 Aligned_cols=129 Identities=12% Similarity=0.094 Sum_probs=74.1
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCC
Q 017702 24 YANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPS 103 (367)
Q Consensus 24 Y~~nS~~Q~~~~~~~~~ll~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~ 103 (367)
-.+...+|+++..++++++.+ .. ...+..+|+|+|||+|+++...++..-. . .-
T Consensus 331 ~vKy~~Ye~AI~~Al~d~~~~--------~~----~~~~~~vVldVGaGrGpLv~~al~A~a~-----~--------~~- 384 (637)
T 4gqb_A 331 PIKYSQYQQAIYKCLLDRVPE--------EE----KDTNVQVLMVLGAGRGPLVNASLRAAKQ-----A--------DR- 384 (637)
T ss_dssp HHHHHHHHHHHHHHHHHHSCG--------GG----TTTCEEEEEEESCTTSHHHHHHHHHHHH-----T--------TC-
T ss_pred hhhHHHHHHHHHHHHHHhhhh--------cc----ccCCCcEEEEECCCCcHHHHHHHHHHHh-----c--------CC-
Confidence 456778888887766554321 11 1345689999999999998877755421 0 11
Q ss_pred cceeEEEEcCCCccchHHHhhcCC-----ccccceeeccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCC
Q 017702 104 ALEFQVFLNDHSDNDFNTLFKSLP-----HARKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAW 178 (367)
Q Consensus 104 ~~e~~v~~nDlp~NDFn~lf~~l~-----~~~~~f~~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~ 178 (367)
.+.||--+--.|-. +.+.+- .++-..+.|. -+.+-+|..+|+++| -||-. ...
T Consensus 385 --~vkVyAVEknp~A~--~a~~~v~~N~~~dkVtVI~gd----~eev~LPEKVDIIVS----EwMG~----------fLl 442 (637)
T 4gqb_A 385 --RIKLYAVEKNPNAV--VTLENWQFEEWGSQVTVVSSD----MREWVAPEKADIIVS----ELLGS----------FAD 442 (637)
T ss_dssp --EEEEEEEESCHHHH--HHHHHHHHHTTGGGEEEEESC----TTTCCCSSCEEEEEC----CCCBT----------TBG
T ss_pred --CcEEEEEECCHHHH--HHHHHHHhccCCCeEEEEeCc----ceeccCCcccCEEEE----EcCcc----------ccc
Confidence 45666544422211 111111 1112233443 355566789999999 55442 122
Q ss_pred CCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEE
Q 017702 179 NKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMV 222 (367)
Q Consensus 179 n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lv 222 (367)
|.+ +-..|.+|-+=|||||+|+
T Consensus 443 ~E~----------------------mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 443 NEL----------------------SPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp GGC----------------------HHHHHHHHGGGEEEEEEEE
T ss_pred ccC----------------------CHHHHHHHHHhcCCCcEEc
Confidence 221 1246778888999999874
|
| >1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A* | Back alignment and structure |
|---|
Probab=96.26 E-value=0.015 Score=54.39 Aligned_cols=21 Identities=10% Similarity=0.184 Sum_probs=17.6
Q ss_pred HHHHHHH-HhhccCceEEEEee
Q 017702 206 SFLNARA-EELVPGGLMVLILA 226 (367)
Q Consensus 206 ~fL~~Ra-~EL~pGG~lvl~~~ 226 (367)
.|++.-. +.|+|||+|+++..
T Consensus 229 ~~~~~i~~~~l~pgG~l~~e~~ 250 (284)
T 1nv8_A 229 DFYREFFGRYDTSGKIVLMEIG 250 (284)
T ss_dssp HHHHHHHHHCCCTTCEEEEECC
T ss_pred HHHHHHHHhcCCCCCEEEEEEC
Confidence 5778888 99999999998764
|
| >2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A | Back alignment and structure |
|---|
Probab=96.25 E-value=0.0065 Score=56.38 Aligned_cols=20 Identities=10% Similarity=0.210 Sum_probs=17.5
Q ss_pred HHHHHHHhhccCceEEEEee
Q 017702 207 FLNARAEELVPGGLMVLILA 226 (367)
Q Consensus 207 fL~~Ra~EL~pGG~lvl~~~ 226 (367)
|++...+-|+|||+|++...
T Consensus 153 ~~~~~~~~L~pgG~lv~~~~ 172 (262)
T 2cmg_A 153 RIDGLKRMLKEDGVFISVAK 172 (262)
T ss_dssp HHHHHHTTEEEEEEEEEEEE
T ss_pred HHHHHHHhcCCCcEEEEEcC
Confidence 88888999999999998753
|
| >1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32 | Back alignment and structure |
|---|
Probab=96.18 E-value=0.014 Score=50.76 Aligned_cols=75 Identities=11% Similarity=-0.069 Sum_probs=41.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCccc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSF 141 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SF 141 (367)
...+|+|+|||+|..++.+... + .-+|+-.|+...--...-+.+. +--|..+. +
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~------------------~---~~~v~~vD~~~~~~~~a~~~~~--~~~~~~~d---~ 104 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLL------------------G---AESVTAFDIDPDAIETAKRNCG--GVNFMVAD---V 104 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHT------------------T---BSEEEEEESCHHHHHHHHHHCT--TSEEEECC---G
T ss_pred CCCEEEEEeCCccHHHHHHHHc------------------C---CCEEEEEECCHHHHHHHHHhcC--CCEEEECc---H
Confidence 4579999999999998876511 1 1146777764322222112222 22244443 2
Q ss_pred cccCCCCCceeEEEeccccccccC
Q 017702 142 HSRLFPRSSIHFVHTSYALHWLSK 165 (367)
Q Consensus 142 y~~l~P~~svd~~~S~~alhWLs~ 165 (367)
.+ +| +++|+++++-.+||+++
T Consensus 105 ~~--~~-~~~D~v~~~~p~~~~~~ 125 (200)
T 1ne2_A 105 SE--IS-GKYDTWIMNPPFGSVVK 125 (200)
T ss_dssp GG--CC-CCEEEEEECCCC-----
T ss_pred HH--CC-CCeeEEEECCCchhccC
Confidence 22 24 79999999999999753
|
| >1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32 | Back alignment and structure |
|---|
Probab=95.99 E-value=0.055 Score=47.04 Aligned_cols=76 Identities=17% Similarity=0.149 Sum_probs=43.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCcc--ccceeeccCc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHA--RKYFAAGLPG 139 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~--~~~f~~gvp~ 139 (367)
+..+|+|+|||+|..++.+... .+ . +++-.|....-....-+.+... +--+..+.
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~-----------------~~---~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d-- 105 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLL-----------------GA---K-EVICVEVDKEAVDVLIENLGEFKGKFKVFIGD-- 105 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-----------------TC---S-EEEEEESCHHHHHHHHHHTGGGTTSEEEEESC--
T ss_pred CcCEEEEeeCCCCHHHHHHHHc-----------------CC---C-EEEEEECCHHHHHHHHHHHHHcCCCEEEEECc--
Confidence 3479999999999988876521 01 2 5677777532222222222211 12234443
Q ss_pred cccccCCCCCceeEEEecccccccc
Q 017702 140 SFHSRLFPRSSIHFVHTSYALHWLS 164 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alhWLs 164 (367)
+.+ +| +++|+++++-.+|+.+
T Consensus 106 -~~~--~~-~~~D~v~~~~p~~~~~ 126 (207)
T 1wy7_A 106 -VSE--FN-SRVDIVIMNPPFGSQR 126 (207)
T ss_dssp -GGG--CC-CCCSEEEECCCCSSSS
T ss_pred -hHH--cC-CCCCEEEEcCCCcccc
Confidence 222 23 5899999988888755
|
| >2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A* | Back alignment and structure |
|---|
Probab=95.90 E-value=0.016 Score=56.63 Aligned_cols=114 Identities=11% Similarity=0.033 Sum_probs=63.1
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC---Ccc--ccceeeccC
Q 017702 64 FKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL---PHA--RKYFAAGLP 138 (367)
Q Consensus 64 ~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l---~~~--~~~f~~gvp 138 (367)
-+|+|+|||+|..|+.+... .. . +|+..|+...--...-++. .-. +--|..+.-
T Consensus 214 ~~VLDl~cGtG~~sl~la~~-----------------ga---~-~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~ 272 (385)
T 2b78_A 214 KTVLNLFSYTAAFSVAAAMG-----------------GA---M-ATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDV 272 (385)
T ss_dssp CEEEEETCTTTHHHHHHHHT-----------------TB---S-EEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCH
T ss_pred CeEEEEeeccCHHHHHHHHC-----------------CC---C-EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCH
Confidence 58999999999999987621 01 1 4667776542221111111 101 223555543
Q ss_pred ccccccCC-CCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 139 GSFHSRLF-PRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 139 ~SFy~~l~-P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
..+...+. ...++|+|++. .|. ... +++. ..+..+++..++..-.+-|+|
T Consensus 273 ~~~l~~~~~~~~~fD~Ii~D--------PP~-~~~------~~~~--------------~~~~~~~~~~ll~~~~~~L~p 323 (385)
T 2b78_A 273 FDYFKYARRHHLTYDIIIID--------PPS-FAR------NKKE--------------VFSVSKDYHKLIRQGLEILSE 323 (385)
T ss_dssp HHHHHHHHHTTCCEEEEEEC--------CCC-C-----------C--------------CCCHHHHHHHHHHHHHHTEEE
T ss_pred HHHHHHHHHhCCCccEEEEC--------CCC-CCC------Chhh--------------HHHHHHHHHHHHHHHHHhcCC
Confidence 33222221 13589999972 222 100 0010 012345677789999999999
Q ss_pred CceEEEEeec
Q 017702 218 GGLMVLILAA 227 (367)
Q Consensus 218 GG~lvl~~~g 227 (367)
||.+++++..
T Consensus 324 gG~l~~~~~~ 333 (385)
T 2b78_A 324 NGLIIASTNA 333 (385)
T ss_dssp EEEEEEEECC
T ss_pred CcEEEEEeCC
Confidence 9999988865
|
| >3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A* | Back alignment and structure |
|---|
Probab=95.79 E-value=0.0097 Score=56.35 Aligned_cols=21 Identities=19% Similarity=0.094 Sum_probs=18.4
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAVQ 82 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~ 82 (367)
..-+|+|+|||+|..|..+.+
T Consensus 50 ~~~~VLEIG~G~G~lT~~La~ 70 (295)
T 3gru_A 50 KDDVVLEIGLGKGILTEELAK 70 (295)
T ss_dssp TTCEEEEECCTTSHHHHHHHH
T ss_pred CcCEEEEECCCchHHHHHHHh
Confidence 346999999999999998875
|
| >3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A* | Back alignment and structure |
|---|
Probab=95.75 E-value=0.063 Score=50.28 Aligned_cols=69 Identities=10% Similarity=0.007 Sum_probs=42.6
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC--c--cccceeeccC
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP--H--ARKYFAAGLP 138 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~--~--~~~~f~~gvp 138 (367)
.-+|+|+|||+|+.|+.++.. . .-+|+..|+-..-...+-+++. . .+-.+..++.
T Consensus 126 g~~VlD~~aG~G~~~i~~a~~-----------------g----~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~ 184 (278)
T 3k6r_A 126 DELVVDMFAGIGHLSLPIAVY-----------------G----KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDN 184 (278)
T ss_dssp TCEEEETTCTTTTTTHHHHHH-----------------T----CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCT
T ss_pred CCEEEEecCcCcHHHHHHHHh-----------------c----CCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcH
Confidence 479999999999999977521 0 1268898986544444444432 1 1122444553
Q ss_pred ccccccCCCCCceeEEEe
Q 017702 139 GSFHSRLFPRSSIHFVHT 156 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S 156 (367)
.. +.+.+.+|.++.
T Consensus 185 ~~----~~~~~~~D~Vi~ 198 (278)
T 3k6r_A 185 RD----FPGENIADRILM 198 (278)
T ss_dssp TT----CCCCSCEEEEEE
T ss_pred HH----hccccCCCEEEE
Confidence 33 345678898875
|
| >1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24 | Back alignment and structure |
|---|
Probab=95.65 E-value=0.011 Score=55.36 Aligned_cols=21 Identities=14% Similarity=0.186 Sum_probs=18.2
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAVQ 82 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~ 82 (367)
..-+|+|+|||+|..|..+.+
T Consensus 28 ~~~~VLDiG~G~G~lt~~L~~ 48 (285)
T 1zq9_A 28 PTDVVLEVGPGTGNMTVKLLE 48 (285)
T ss_dssp TTCEEEEECCTTSTTHHHHHH
T ss_pred CCCEEEEEcCcccHHHHHHHh
Confidence 456999999999999998874
|
| >3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A* | Back alignment and structure |
|---|
Probab=95.56 E-value=0.054 Score=57.24 Aligned_cols=114 Identities=11% Similarity=0.020 Sum_probs=62.8
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC-----CccccceeeccC
Q 017702 64 FKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL-----PHARKYFAAGLP 138 (367)
Q Consensus 64 ~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l-----~~~~~~f~~gvp 138 (367)
-+|+|+|||+|..|+.++. . .. . +|+..|+...--...-+++ ...+--|..+.-
T Consensus 541 ~~VLDlg~GtG~~sl~aa~------------~-----ga---~-~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~ 599 (703)
T 3v97_A 541 KDFLNLFSYTGSATVHAGL------------G-----GA---R-STTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADC 599 (703)
T ss_dssp CEEEEESCTTCHHHHHHHH------------T-----TC---S-EEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCH
T ss_pred CcEEEeeechhHHHHHHHH------------C-----CC---C-EEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCH
Confidence 5899999999999987752 0 11 2 4677777532211111111 111223444442
Q ss_pred ccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccC
Q 017702 139 GSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPG 218 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 218 (367)
-.+... ..+++|+|++ +.|.-...+.. . . ..+..+|...++..-.+-|+||
T Consensus 600 ~~~l~~--~~~~fD~Ii~--------DPP~f~~~~~~-------~----------~--~~~~~~~~~~ll~~a~~~Lkpg 650 (703)
T 3v97_A 600 LAWLRE--ANEQFDLIFI--------DPPTFSNSKRM-------E----------D--AFDVQRDHLALMKDLKRLLRAG 650 (703)
T ss_dssp HHHHHH--CCCCEEEEEE--------CCCSBC--------------------------CCBHHHHHHHHHHHHHHHEEEE
T ss_pred HHHHHh--cCCCccEEEE--------CCccccCCccc-------h----------h--HHHHHHHHHHHHHHHHHhcCCC
Confidence 222222 3478999998 23321111000 0 0 0123467778999999999999
Q ss_pred ceEEEEeec
Q 017702 219 GLMVLILAA 227 (367)
Q Consensus 219 G~lvl~~~g 227 (367)
|+|++++..
T Consensus 651 G~L~~s~~~ 659 (703)
T 3v97_A 651 GTIMFSNNK 659 (703)
T ss_dssp EEEEEEECC
T ss_pred cEEEEEECC
Confidence 999987765
|
| >2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51 | Back alignment and structure |
|---|
Probab=95.55 E-value=0.013 Score=57.30 Aligned_cols=115 Identities=15% Similarity=0.066 Sum_probs=64.2
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC---Ccc-ccceeeccC
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL---PHA-RKYFAAGLP 138 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l---~~~-~~~f~~gvp 138 (367)
.-+|+|+|||+|..|+.+... + . . +|+-.|+...-....-+++ .-. +-.|..+.-
T Consensus 218 ~~~VLDl~~G~G~~~~~la~~------------g-----~---~-~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~ 276 (396)
T 2as0_A 218 GDRVLDVFTYTGGFAIHAAIA------------G-----A---D-EVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSA 276 (396)
T ss_dssp TCEEEETTCTTTHHHHHHHHT------------T-----C---S-EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCH
T ss_pred CCeEEEecCCCCHHHHHHHHC------------C-----C---C-EEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCH
Confidence 469999999999999987621 0 1 1 4666666432111111111 101 223444432
Q ss_pred ccccccCC-CCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 139 GSFHSRLF-PRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 139 ~SFy~~l~-P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
..+...+. +..++|++++ +.|. +.+. ... .....+++..+|..-.+-|+|
T Consensus 277 ~~~~~~~~~~~~~fD~Vi~--------dpP~---------~~~~-------~~~-----~~~~~~~~~~~l~~~~~~Lkp 327 (396)
T 2as0_A 277 FEEMEKLQKKGEKFDIVVL--------DPPA---------FVQH-------EKD-----LKAGLRAYFNVNFAGLNLVKD 327 (396)
T ss_dssp HHHHHHHHHTTCCEEEEEE--------CCCC---------SCSS-------GGG-----HHHHHHHHHHHHHHHHTTEEE
T ss_pred HHHHHHHHhhCCCCCEEEE--------CCCC---------CCCC-------HHH-----HHHHHHHHHHHHHHHHHhcCC
Confidence 22211111 2568999997 2221 1110 000 123456788899999999999
Q ss_pred CceEEEEeec
Q 017702 218 GGLMVLILAA 227 (367)
Q Consensus 218 GG~lvl~~~g 227 (367)
||.|++....
T Consensus 328 gG~lv~~~~~ 337 (396)
T 2as0_A 328 GGILVTCSCS 337 (396)
T ss_dssp EEEEEEEECC
T ss_pred CcEEEEEECC
Confidence 9999888765
|
| >3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=95.23 E-value=0.012 Score=54.50 Aligned_cols=51 Identities=18% Similarity=0.379 Sum_probs=35.5
Q ss_pred CceEEeeecCCCCcccHHHHH------------HHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHH
Q 017702 62 KPFKIADLGCSVGPNTLLAVQ------------NIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNT 121 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~------------~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~ 121 (367)
..-+|+|+|||+|..|..+++ ..++.+++++.. .+ .++++..|...-||..
T Consensus 29 ~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~------~~---~v~~i~~D~~~~~~~~ 91 (255)
T 3tqs_A 29 KTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQ------QK---NITIYQNDALQFDFSS 91 (255)
T ss_dssp TTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTT------CT---TEEEEESCTTTCCGGG
T ss_pred CcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhh------CC---CcEEEEcchHhCCHHH
Confidence 346899999999999999975 455555555432 12 4677777777655443
|
| >2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A* | Back alignment and structure |
|---|
Probab=95.08 E-value=0.022 Score=54.50 Aligned_cols=94 Identities=14% Similarity=0.159 Sum_probs=56.5
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC--c--cccceeeccC
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP--H--ARKYFAAGLP 138 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~--~--~~~~f~~gvp 138 (367)
..+|+|+|||+|..|+. .. . .-+|+..|+...-...+-+++. . .+-.|..+..
T Consensus 196 ~~~VLDlg~G~G~~~l~-a~-------------------~---~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~ 252 (336)
T 2yx1_A 196 NDVVVDMFAGVGPFSIA-CK-------------------N---AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDV 252 (336)
T ss_dssp TCEEEETTCTTSHHHHH-TT-------------------T---SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCG
T ss_pred CCEEEEccCccCHHHHh-cc-------------------C---CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCh
Confidence 46999999999999987 52 0 1257787775322222222211 0 1223444443
Q ss_pred ccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccC
Q 017702 139 GSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPG 218 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 218 (367)
..+. +++|++++. .|... ..|+..-.+-|+||
T Consensus 253 ~~~~------~~fD~Vi~d--------pP~~~----------------------------------~~~l~~~~~~L~~g 284 (336)
T 2yx1_A 253 REVD------VKGNRVIMN--------LPKFA----------------------------------HKFIDKALDIVEEG 284 (336)
T ss_dssp GGCC------CCEEEEEEC--------CTTTG----------------------------------GGGHHHHHHHEEEE
T ss_pred HHhc------CCCcEEEEC--------CcHhH----------------------------------HHHHHHHHHHcCCC
Confidence 3322 789999972 23210 03677777889999
Q ss_pred ceEEEEeec
Q 017702 219 GLMVLILAA 227 (367)
Q Consensus 219 G~lvl~~~g 227 (367)
|.+++..+.
T Consensus 285 G~l~~~~~~ 293 (336)
T 2yx1_A 285 GVIHYYTIG 293 (336)
T ss_dssp EEEEEEEEE
T ss_pred CEEEEEEee
Confidence 999998876
|
| >2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=95.05 E-value=0.023 Score=53.53 Aligned_cols=20 Identities=20% Similarity=0.423 Sum_probs=17.5
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAV 81 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~ 81 (367)
..-+|+|+|||+|..|..+.
T Consensus 42 ~~~~VLDiG~G~G~lt~~La 61 (299)
T 2h1r_A 42 SSDIVLEIGCGTGNLTVKLL 61 (299)
T ss_dssp TTCEEEEECCTTSTTHHHHT
T ss_pred CcCEEEEEcCcCcHHHHHHH
Confidence 34699999999999999876
|
| >2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638} | Back alignment and structure |
|---|
Probab=94.93 E-value=0.057 Score=52.28 Aligned_cols=102 Identities=9% Similarity=-0.067 Sum_probs=58.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC---ccccceeeccC
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP---HARKYFAAGLP 138 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~---~~~~~f~~gvp 138 (367)
...+|+|+| |+|..++.+... .| .-+|+.-|+...--...-+.+. -.+--|..+.
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~-----------------~~---~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D- 229 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLS-----------------GL---PKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFD- 229 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHH-----------------TC---CSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCC-
T ss_pred CCCEEEEEC-CCCHHHHHHHHh-----------------CC---CCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEECh-
Confidence 347999999 999999877521 11 2368888885322111111111 0122244443
Q ss_pred ccccccCC--CCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhc
Q 017702 139 GSFHSRLF--PRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELV 216 (367)
Q Consensus 139 ~SFy~~l~--P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~ 216 (367)
+.+.+- +++++|+|+++..+++. +...||+.-.+-|+
T Consensus 230 --~~~~l~~~~~~~fD~Vi~~~p~~~~---------------------------------------~~~~~l~~~~~~Lk 268 (373)
T 2qm3_A 230 --LRKPLPDYALHKFDTFITDPPETLE---------------------------------------AIRAFVGRGIATLK 268 (373)
T ss_dssp --TTSCCCTTTSSCBSEEEECCCSSHH---------------------------------------HHHHHHHHHHHTBC
T ss_pred --hhhhchhhccCCccEEEECCCCchH---------------------------------------HHHHHHHHHHHHcc
Confidence 333221 24689999996443331 12578999999999
Q ss_pred cCceE-EEEee
Q 017702 217 PGGLM-VLILA 226 (367)
Q Consensus 217 pGG~l-vl~~~ 226 (367)
|||++ ++++.
T Consensus 269 pgG~~~~~~~~ 279 (373)
T 2qm3_A 269 GPRCAGYFGIT 279 (373)
T ss_dssp STTCEEEEEEC
T ss_pred cCCeEEEEEEe
Confidence 99965 55553
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=94.87 E-value=0.037 Score=56.89 Aligned_cols=82 Identities=17% Similarity=0.256 Sum_probs=44.5
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHH---HhhcCCccccceeecc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNT---LFKSLPHARKYFAAGL 137 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~---lf~~l~~~~~~f~~gv 137 (367)
.++.||+|+|||.|.+|..+... -.+|+--|+....-.. ....-+..+--|..+.
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~----------------------ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~ 122 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASK----------------------GATIVGIDFQQENINVCRALAEENPDFAAEFRVGR 122 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHT----------------------TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECC
T ss_pred CCCCeEEEECCCCcHHHHHHHhC----------------------CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECC
Confidence 35689999999999999887631 0135555554322111 0000000011233332
Q ss_pred CccccccCCCCCceeEEEeccccccccC
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSK 165 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~ 165 (367)
.-.+.. -++++++|+|.|.-.||++.+
T Consensus 123 ~~~~~~-~~~~~~fD~v~~~e~~ehv~~ 149 (569)
T 4azs_A 123 IEEVIA-ALEEGEFDLAIGLSVFHHIVH 149 (569)
T ss_dssp HHHHHH-HCCTTSCSEEEEESCHHHHHH
T ss_pred HHHHhh-hccCCCccEEEECcchhcCCC
Confidence 111111 135678999999999999653
|
| >3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei} | Back alignment and structure |
|---|
Probab=94.82 E-value=0.23 Score=50.84 Aligned_cols=145 Identities=17% Similarity=0.236 Sum_probs=67.9
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC--CccccceeeccCcc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL--PHARKYFAAGLPGS 140 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l--~~~~~~f~~gvp~S 140 (367)
..+|+|.+||||..-+.+...+.+.-... ...... .. ..++++-.|+-..-....-.++ ..-..-+-.-.+-+
T Consensus 245 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~-~~~~~~-~~---~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDt 319 (544)
T 3khk_A 245 KGRVYDPAMGSGGFFVSSDKFIEKHANVK-HYNASE-QK---KQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADS 319 (544)
T ss_dssp SEEEEESSCTTCHHHHHHHHHHHHHHHHH-TSCHHH-HG---GGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCT
T ss_pred CCeEeCcccCcCcHHHHHHHHHHHhcccc-ccchHH-Hh---hhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccch
Confidence 35999999999988777665543221110 000000 00 0357888777432222111111 11000110112224
Q ss_pred ccccCCCCCceeEEEecccc---ccccCCCccccCCCCCCCCCCc---ccccCCCHHHHHHHHHHHHhhHHHHHHHHHHh
Q 017702 141 FHSRLFPRSSIHFVHTSYAL---HWLSKVPKEIVDPCSPAWNKGS---IQCSESNIEVVRAYSTQYKNDMESFLNARAEE 214 (367)
Q Consensus 141 Fy~~l~P~~svd~~~S~~al---hWLs~~P~~~~~~~~~~~n~g~---i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~E 214 (367)
+....++...+|+|+++=-+ .|-... +.. .+-|.-|. ... ..++. ...|+ .|+++-..-
T Consensus 320 L~~~~~~~~~fD~Iv~NPPf~~~~~~~~~---~~~--d~r~~~g~~~~~~~-~~~~~--------~~~~~-~Fl~~~l~~ 384 (544)
T 3khk_A 320 FLDDQHPDLRADFVMTNPPFNMKDWWHEK---LAD--DPRWTINTNGEKRI-LTPPT--------GNANF-AWMLHMLYH 384 (544)
T ss_dssp TTSCSCTTCCEEEEEECCCSSCCSCCCGG---GTT--CGGGEECCC--CEE-CCCCT--------TCTHH-HHHHHHHHT
T ss_pred hcCcccccccccEEEECCCcCCccccchh---hhh--hhhhhcCccccccc-ccCCC--------cchhH-HHHHHHHHH
Confidence 44555677899999995222 242210 100 00000000 000 00000 01133 599999999
Q ss_pred hccCceEEEEeec
Q 017702 215 LVPGGLMVLILAA 227 (367)
Q Consensus 215 L~pGG~lvl~~~g 227 (367)
|+|||++++.++.
T Consensus 385 Lk~gGr~aiVlP~ 397 (544)
T 3khk_A 385 LAPTGSMALLLAN 397 (544)
T ss_dssp EEEEEEEEEEEET
T ss_pred hccCceEEEEecc
Confidence 9999999999863
|
| >3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=94.81 E-value=0.026 Score=55.17 Aligned_cols=26 Identities=12% Similarity=0.195 Sum_probs=21.9
Q ss_pred hhHHHHHHHHHHhhccCceEEEEeec
Q 017702 202 NDMESFLNARAEELVPGGLMVLILAA 227 (367)
Q Consensus 202 ~D~~~fL~~Ra~EL~pGG~lvl~~~g 227 (367)
+++..++..-.+.|+|||.+++++..
T Consensus 316 ~~~~~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 316 RGYKDINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp THHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 36677888899999999999988764
|
| >3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A* | Back alignment and structure |
|---|
Probab=94.47 E-value=0.081 Score=52.00 Aligned_cols=73 Identities=14% Similarity=0.127 Sum_probs=43.8
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC--c--cc-cceeecc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP--H--AR-KYFAAGL 137 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~--~--~~-~~f~~gv 137 (367)
..+|+|++||+|..++.+++.. .. .-+|+.+|.-..-...+-+++. . .+ -.+..++
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~----------------~g---a~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~D 113 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLET----------------SC---VEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGME 113 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHC----------------SC---EEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSC
T ss_pred CCEEEECCCcccHHHHHHHHhC----------------CC---CCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 4799999999999999887422 00 1268888886544333333332 1 11 2355555
Q ss_pred Cccccc-cCCCCCceeEEEe
Q 017702 138 PGSFHS-RLFPRSSIHFVHT 156 (367)
Q Consensus 138 p~SFy~-~l~P~~svd~~~S 156 (367)
...+.. ++ ..++|+|+.
T Consensus 114 a~~~l~~~~--~~~fD~V~l 131 (392)
T 3axs_A 114 ANFFLRKEW--GFGFDYVDL 131 (392)
T ss_dssp HHHHHHSCC--SSCEEEEEE
T ss_pred HHHHHHHhh--CCCCcEEEE
Confidence 444443 33 457899987
|
| >3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A* | Back alignment and structure |
|---|
Probab=94.40 E-value=0.14 Score=47.93 Aligned_cols=19 Identities=32% Similarity=0.490 Sum_probs=16.6
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017702 63 PFKIADLGCSVGPNTLLAV 81 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~ 81 (367)
..+|+|||||.|..|..++
T Consensus 75 ~~~VLDLGaAPGGWSQvAa 93 (277)
T 3evf_A 75 EGRVIDLGCGRGGWCYYAA 93 (277)
T ss_dssp CEEEEEETCTTCHHHHHHH
T ss_pred CCEEEEecCCCCHHHHHHH
Confidence 4689999999999998765
|
| >2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A* | Back alignment and structure |
|---|
Probab=94.30 E-value=0.035 Score=54.31 Aligned_cols=19 Identities=11% Similarity=-0.053 Sum_probs=17.3
Q ss_pred eEEeeecCCCCcccHHHHH
Q 017702 64 FKIADLGCSVGPNTLLAVQ 82 (367)
Q Consensus 64 ~~IaD~GCs~G~nT~~~~~ 82 (367)
.+|+|+|||+|..++.+..
T Consensus 49 ~~VLDl~aGtG~~~l~~a~ 67 (378)
T 2dul_A 49 KIVLDALSATGIRGIRFAL 67 (378)
T ss_dssp SEEEESSCTTSHHHHHHHH
T ss_pred CEEEECCCchhHHHHHHHH
Confidence 6899999999999998874
|
| >2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45 | Back alignment and structure |
|---|
Probab=94.26 E-value=0.17 Score=50.17 Aligned_cols=22 Identities=27% Similarity=0.400 Sum_probs=19.5
Q ss_pred HHHHHHHHhhccCceEEEEeec
Q 017702 206 SFLNARAEELVPGGLMVLILAA 227 (367)
Q Consensus 206 ~fL~~Ra~EL~pGG~lvl~~~g 227 (367)
.||++-.+-|+|||++++.++.
T Consensus 288 ~fl~~~~~~Lk~gG~~a~V~p~ 309 (445)
T 2okc_A 288 NFLQHMMLMLKTGGRAAVVLPD 309 (445)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEH
T ss_pred HHHHHHHHHhccCCEEEEEECC
Confidence 5888888999999999999874
|
| >3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A* | Back alignment and structure |
|---|
Probab=94.22 E-value=0.01 Score=55.41 Aligned_cols=18 Identities=17% Similarity=0.292 Sum_probs=16.9
Q ss_pred EEeeecCCCCcccHHHHH
Q 017702 65 KIADLGCSVGPNTLLAVQ 82 (367)
Q Consensus 65 ~IaD~GCs~G~nT~~~~~ 82 (367)
+|+|+|||+|..|..+++
T Consensus 49 ~VLEIG~G~G~lt~~L~~ 66 (271)
T 3fut_A 49 PVFEVGPGLGALTRALLE 66 (271)
T ss_dssp CEEEECCTTSHHHHHHHH
T ss_pred eEEEEeCchHHHHHHHHH
Confidence 999999999999998875
|
| >1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A* | Back alignment and structure |
|---|
Probab=94.15 E-value=0.62 Score=45.95 Aligned_cols=20 Identities=30% Similarity=0.363 Sum_probs=17.6
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAV 81 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~ 81 (367)
+..+|+|+|||+|..|+.+.
T Consensus 286 ~~~~VLDlgcG~G~~~~~la 305 (433)
T 1uwv_A 286 PEDRVLDLFCGMGNFTLPLA 305 (433)
T ss_dssp TTCEEEEESCTTTTTHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHH
Confidence 34689999999999999886
|
| >1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A | Back alignment and structure |
|---|
Probab=93.87 E-value=0.021 Score=52.15 Aligned_cols=21 Identities=33% Similarity=0.319 Sum_probs=18.2
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAVQ 82 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~ 82 (367)
..-+|+|+|||+|..|..+.+
T Consensus 30 ~~~~VLDiG~G~G~lt~~l~~ 50 (244)
T 1qam_A 30 EHDNIFEIGSGKGHFTLELVQ 50 (244)
T ss_dssp TTCEEEEECCTTSHHHHHHHH
T ss_pred CCCEEEEEeCCchHHHHHHHH
Confidence 457999999999999998874
|
| >3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A* | Back alignment and structure |
|---|
Probab=93.80 E-value=0.16 Score=49.12 Aligned_cols=75 Identities=9% Similarity=-0.042 Sum_probs=41.3
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc----cccceeeccC
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH----ARKYFAAGLP 138 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~----~~~~f~~gvp 138 (367)
..+|+|+|||+|..++.+.... + .-+++-.|+...-....-+++.. .+--|..+.
T Consensus 218 ~~~vLD~gCGsG~~~i~~a~~~-----------------~---~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D- 276 (373)
T 3tm4_A 218 GGSVLDPMCGSGTILIELALRR-----------------Y---SGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGD- 276 (373)
T ss_dssp SCCEEETTCTTCHHHHHHHHTT-----------------C---CSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECC-
T ss_pred CCEEEEccCcCcHHHHHHHHhC-----------------C---CCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECC-
Confidence 3689999999999988775221 1 11466666653222221111110 112233333
Q ss_pred ccccccCCCCCceeEEEecccc
Q 017702 139 GSFHSRLFPRSSIHFVHTSYAL 160 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~~al 160 (367)
+.+-.+|++++|+++++-.+
T Consensus 277 --~~~~~~~~~~fD~Ii~npPy 296 (373)
T 3tm4_A 277 --ATQLSQYVDSVDFAISNLPY 296 (373)
T ss_dssp --GGGGGGTCSCEEEEEEECCC
T ss_pred --hhhCCcccCCcCEEEECCCC
Confidence 34444567899999995443
|
| >2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38 | Back alignment and structure |
|---|
Probab=93.20 E-value=0.29 Score=46.34 Aligned_cols=21 Identities=14% Similarity=0.011 Sum_probs=18.3
Q ss_pred ceEEeeecCCCCcccHHHHHH
Q 017702 63 PFKIADLGCSVGPNTLLAVQN 83 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ 83 (367)
..+|+|+|||+|.-|+.+.+.
T Consensus 103 g~~VLDlcaG~G~kt~~la~~ 123 (309)
T 2b9e_A 103 GSHVIDACAAPGNKTSHLAAL 123 (309)
T ss_dssp TCEEEESSCTTCHHHHHHHHH
T ss_pred CCEEEEeCCChhHHHHHHHHH
Confidence 469999999999999988754
|
| >3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus} | Back alignment and structure |
|---|
Probab=92.95 E-value=0.69 Score=49.54 Aligned_cols=24 Identities=21% Similarity=0.278 Sum_probs=21.3
Q ss_pred HHHHHHHHHHhhccCceEEEEeec
Q 017702 204 MESFLNARAEELVPGGLMVLILAA 227 (367)
Q Consensus 204 ~~~fL~~Ra~EL~pGG~lvl~~~g 227 (367)
...|+.+-.+-|+|||++++.++.
T Consensus 444 y~aFIe~Al~lLKpGGrLAfIlP~ 467 (878)
T 3s1s_A 444 EALFLELVTELVQDGTVISAIMPK 467 (878)
T ss_dssp HHHHHHHHHHHSCTTCEEEEEEET
T ss_pred HHHHHHHHHHhcCCCcEEEEEECh
Confidence 556999999999999999999975
|
| >2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A* | Back alignment and structure |
|---|
Probab=92.39 E-value=0.2 Score=49.59 Aligned_cols=18 Identities=28% Similarity=0.255 Sum_probs=16.4
Q ss_pred eEEeeecCCCCcccHHHH
Q 017702 64 FKIADLGCSVGPNTLLAV 81 (367)
Q Consensus 64 ~~IaD~GCs~G~nT~~~~ 81 (367)
.+|+|+|||+|..|+.+.
T Consensus 292 ~~VLDlgcG~G~~sl~la 309 (425)
T 2jjq_A 292 EKILDMYSGVGTFGIYLA 309 (425)
T ss_dssp SEEEEETCTTTHHHHHHH
T ss_pred CEEEEeeccchHHHHHHH
Confidence 689999999999999876
|
| >3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus} | Back alignment and structure |
|---|
Probab=92.37 E-value=0.28 Score=50.13 Aligned_cols=129 Identities=18% Similarity=0.262 Sum_probs=66.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhc-----CCccccceeec
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKS-----LPHARKYFAAG 136 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~-----l~~~~~~f~~g 136 (367)
...+|+|.+||||...+.+.+.+. . .. ..+++-.|+-..-+...-.+ +.....-...
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~--------~------~~---~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~- 282 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSR--------Q------PQ---TVVYFGQELNTSTYNLARMNMILHGVPIENQFLHN- 282 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCS--------C------TT---TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEE-
T ss_pred CCCEEeecccchhHHHHHHHHHHH--------h------cc---CceEEEEECcHHHHHHHHHHHHHcCCCcCccceEe-
Confidence 457999999999998887765431 0 11 34677777743222221111 1101111112
Q ss_pred cCcccccc---CCCCCceeEEEec--cccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHH
Q 017702 137 LPGSFHSR---LFPRSSIHFVHTS--YALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNAR 211 (367)
Q Consensus 137 vp~SFy~~---l~P~~svd~~~S~--~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~R 211 (367)
|.++.. ..+...+|+|+++ +...|-.. .....+.....| |.+. ..+ ..|+ .|+.+-
T Consensus 283 --gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~-~~~~~d~rf~~~--G~~~-~~s------------~~~~-~Fl~~~ 343 (542)
T 3lkd_A 283 --ADTLDEDWPTQEPTNFDGVLMNPPYSAKWSAS-SGFMDDPRFSPF--GKLA-PKS------------KADF-AFLLHG 343 (542)
T ss_dssp --SCTTTSCSCCSSCCCBSEEEECCCTTCCCCCC-GGGGGSTTTGGG--SSCC-CTT------------CCHH-HHHHHH
T ss_pred --cceecccccccccccccEEEecCCcCCccccc-hhhhhhhhhhhh--hhcC-CCc------------hhhH-HHHHHH
Confidence 222322 2567889999996 33344211 000111100000 1000 000 1133 589999
Q ss_pred HHhhc-cCceEEEEeec
Q 017702 212 AEELV-PGGLMVLILAA 227 (367)
Q Consensus 212 a~EL~-pGG~lvl~~~g 227 (367)
..-|+ |||++++.++.
T Consensus 344 l~~Lk~~gGr~a~VlP~ 360 (542)
T 3lkd_A 344 YYHLKQDNGVMAIVLPH 360 (542)
T ss_dssp HHTBCTTTCEEEEEEET
T ss_pred HHHhCCCceeEEEEecc
Confidence 99999 99999999875
|
| >3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus} | Back alignment and structure |
|---|
Probab=91.98 E-value=0.32 Score=45.54 Aligned_cols=20 Identities=30% Similarity=0.434 Sum_probs=17.0
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAV 81 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~ 81 (367)
...+|+|||||.|..|..++
T Consensus 90 ~~~~VLDLGaAPGGWsQvAa 109 (282)
T 3gcz_A 90 PTGIVVDLGCGRGGWSYYAA 109 (282)
T ss_dssp CCEEEEEETCTTCHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHH
Confidence 34699999999999998766
|
| >3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A* | Back alignment and structure |
|---|
Probab=91.04 E-value=1.3 Score=41.84 Aligned_cols=21 Identities=29% Similarity=0.411 Sum_probs=18.4
Q ss_pred CCceEEeeecCCCCcccHHHH
Q 017702 61 LKPFKIADLGCSVGPNTLLAV 81 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~ 81 (367)
.+..+|+|+|||.|..|..++
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~ 100 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAA 100 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHH
T ss_pred CCCCEEEEcCCCCCHHHHHHH
Confidence 356899999999999998876
|
| >3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=91.02 E-value=0.059 Score=50.41 Aligned_cols=22 Identities=14% Similarity=0.255 Sum_probs=19.1
Q ss_pred CceEEeeecCCCCcccHHHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAVQN 83 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ 83 (367)
...+|+|+|||+|..|..+.+.
T Consensus 42 ~~~~VLEIG~G~G~lt~~La~~ 63 (279)
T 3uzu_A 42 RGERMVEIGPGLGALTGPVIAR 63 (279)
T ss_dssp TTCEEEEECCTTSTTHHHHHHH
T ss_pred CcCEEEEEccccHHHHHHHHHh
Confidence 3479999999999999998854
|
| >1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A | Back alignment and structure |
|---|
Probab=90.55 E-value=0.3 Score=44.77 Aligned_cols=16 Identities=13% Similarity=0.142 Sum_probs=14.8
Q ss_pred ceEEeeecCCCCcccH
Q 017702 63 PFKIADLGCSVGPNTL 78 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~ 78 (367)
.-+|+|+|||+|..|.
T Consensus 22 ~~~VLEIG~G~G~lt~ 37 (252)
T 1qyr_A 22 GQAMVEIGPGLAALTE 37 (252)
T ss_dssp TCCEEEECCTTTTTHH
T ss_pred cCEEEEECCCCcHHHH
Confidence 4689999999999999
|
| >3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str} | Back alignment and structure |
|---|
Probab=90.47 E-value=0.63 Score=45.50 Aligned_cols=22 Identities=18% Similarity=0.090 Sum_probs=17.8
Q ss_pred CceEEeeecCCCCcccHHHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAVQN 83 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ 83 (367)
...+|+|.|||+|...+.+...
T Consensus 201 ~~~~vlDp~CGSGt~~ieaa~~ 222 (393)
T 3k0b_A 201 PDRPFYDPVCGSGTIPIEAALI 222 (393)
T ss_dssp TTSCEEETTCTTSHHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHH
Confidence 3478999999999988877643
|
| >1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24 | Back alignment and structure |
|---|
Probab=90.41 E-value=0.036 Score=50.30 Aligned_cols=21 Identities=14% Similarity=0.162 Sum_probs=18.3
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAVQ 82 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~ 82 (367)
...+|+|+|||+|..|..+.+
T Consensus 29 ~~~~VLDiG~G~G~~~~~l~~ 49 (245)
T 1yub_A 29 ETDTVYEIGTGKGHLTTKLAK 49 (245)
T ss_dssp SSEEEEECSCCCSSCSHHHHH
T ss_pred CCCEEEEEeCCCCHHHHHHHH
Confidence 457999999999999998863
|
| >2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B* | Back alignment and structure |
|---|
Probab=89.96 E-value=0.68 Score=47.23 Aligned_cols=22 Identities=27% Similarity=0.558 Sum_probs=19.6
Q ss_pred HHHHHHHHhhccCceEEEEeec
Q 017702 206 SFLNARAEELVPGGLMVLILAA 227 (367)
Q Consensus 206 ~fL~~Ra~EL~pGG~lvl~~~g 227 (367)
.|+.+-.+-|+|||++++.++.
T Consensus 293 ~Fl~~~l~~Lk~gGr~a~V~p~ 314 (541)
T 2ar0_A 293 CFMQHIIETLHPGGRAAVVVPD 314 (541)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEH
T ss_pred HHHHHHHHHhCCCCEEEEEecC
Confidence 5888889999999999999874
|
| >3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} | Back alignment and structure |
|---|
Probab=89.13 E-value=5.4 Score=37.39 Aligned_cols=111 Identities=13% Similarity=0.155 Sum_probs=64.9
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCc--cchH-HHhhc-----CCccccc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSD--NDFN-TLFKS-----LPHARKY 132 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~--NDFn-~lf~~-----l~~~~~~ 132 (367)
+.+-+|+=+|-|.|.....++.. .+ ++ ++..-|+-. =+.. ..|.. +...+--
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~-----------------~~--v~-~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~ 141 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRH-----------------KN--VE-SITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFK 141 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTC-----------------TT--CC-EEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEE
T ss_pred CCCCeEEEECCCchHHHHHHHHc-----------------CC--cc-eEEEEcCCHHHHHHHHhcCccccccccCCCcEE
Confidence 46789999999999887766521 11 02 444444432 0111 11111 1112334
Q ss_pred eeeccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHH
Q 017702 133 FAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARA 212 (367)
Q Consensus 133 f~~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra 212 (367)
...+++..|.++ .++++|+|+.=.+ .+... ....|.+ .|++...
T Consensus 142 v~~~Dg~~~l~~--~~~~yDvIi~D~~--------dp~~~-~~~L~t~-------------------------eFy~~~~ 185 (294)
T 3o4f_A 142 LVIDDGVNFVNQ--TSQTFDVIISDCT--------DPIGP-GESLFTS-------------------------AFYEGCK 185 (294)
T ss_dssp EEESCTTTTTSC--SSCCEEEEEESCC--------CCCCT-TCCSSCC-------------------------HHHHHHH
T ss_pred EEechHHHHHhh--ccccCCEEEEeCC--------CcCCC-chhhcCH-------------------------HHHHHHH
Confidence 566777777754 5678999998432 21111 1112332 4999999
Q ss_pred HhhccCceEEEEeec
Q 017702 213 EELVPGGLMVLILAA 227 (367)
Q Consensus 213 ~EL~pGG~lvl~~~g 227 (367)
+-|+|||.|+.....
T Consensus 186 ~~L~p~Gv~v~q~~s 200 (294)
T 3o4f_A 186 RCLNPGGIFVAQNGV 200 (294)
T ss_dssp HTEEEEEEEEEEEEE
T ss_pred HHhCCCCEEEEecCC
Confidence 999999999987654
|
| >3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus} | Back alignment and structure |
|---|
Probab=89.00 E-value=0.91 Score=42.98 Aligned_cols=19 Identities=16% Similarity=0.270 Sum_probs=14.6
Q ss_pred HHHHHHhhccCceEEEEee
Q 017702 208 LNARAEELVPGGLMVLILA 226 (367)
Q Consensus 208 L~~Ra~EL~pGG~lvl~~~ 226 (367)
|..-.+-|+|||.|++=.+
T Consensus 200 LdfA~~~LkpGGsFvVKVF 218 (344)
T 3r24_A 200 CGFIKQKLALGGSIAVKIT 218 (344)
T ss_dssp HHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHhCcCCCEEEEEEe
Confidence 3334456999999999887
|
| >3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=88.64 E-value=1.9 Score=41.85 Aligned_cols=22 Identities=18% Similarity=0.110 Sum_probs=18.1
Q ss_pred CceEEeeecCCCCcccHHHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAVQN 83 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ 83 (367)
...+|+|.|||+|...+.+...
T Consensus 195 ~~~~vlDp~CGSGt~lieaa~~ 216 (385)
T 3ldu_A 195 AGRVLVDPMCGSGTILIEAAMI 216 (385)
T ss_dssp TTSCEEETTCTTCHHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHH
Confidence 3478999999999998887643
|
| >3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B* | Back alignment and structure |
|---|
Probab=87.91 E-value=0.042 Score=50.48 Aligned_cols=20 Identities=15% Similarity=0.248 Sum_probs=17.5
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAV 81 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~ 81 (367)
..-+|+|+|||+|..|..+.
T Consensus 31 ~~~~VLDiG~G~G~lt~~L~ 50 (249)
T 3ftd_A 31 EGNTVVEVGGGTGNLTKVLL 50 (249)
T ss_dssp TTCEEEEEESCHHHHHHHHT
T ss_pred CcCEEEEEcCchHHHHHHHH
Confidence 35689999999999999886
|
| >2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A | Back alignment and structure |
|---|
Probab=87.08 E-value=0.84 Score=42.52 Aligned_cols=27 Identities=22% Similarity=0.576 Sum_probs=21.7
Q ss_pred HHhhHHHHHHHHHHhhccCceEEEEee
Q 017702 200 YKNDMESFLNARAEELVPGGLMVLILA 226 (367)
Q Consensus 200 ~~~D~~~fL~~Ra~EL~pGG~lvl~~~ 226 (367)
+..++..+++.-.+-|+|||.+++...
T Consensus 72 ~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 72 FLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp HHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 445566778888889999999999875
|
| >3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=85.85 E-value=3.2 Score=40.35 Aligned_cols=22 Identities=18% Similarity=0.152 Sum_probs=17.8
Q ss_pred CceEEeeecCCCCcccHHHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAVQN 83 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ 83 (367)
...+|+|.+||+|...+.....
T Consensus 194 ~~~~llDp~CGSGt~lIEAa~~ 215 (384)
T 3ldg_A 194 PDKPFVDPTCGSGTFCIEAAMI 215 (384)
T ss_dssp TTSCEEETTCTTSHHHHHHHHH
T ss_pred CCCeEEEeCCcCCHHHHHHHHH
Confidence 3478999999999988877643
|
| >3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A | Back alignment and structure |
|---|
Probab=84.45 E-value=0.89 Score=47.91 Aligned_cols=46 Identities=26% Similarity=0.242 Sum_probs=32.1
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCceEEeeecCCCCcccHHHHHHH
Q 017702 24 YANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIADLGCSVGPNTLLAVQNI 84 (367)
Q Consensus 24 Y~~nS~~Q~~~~~~~~~ll~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~nT~~~~~~i 84 (367)
..+...+|+++..+++++..+ ..+...|+|+|||+|+++...+...
T Consensus 386 ~vRy~~Y~~AI~~al~d~~~~---------------~~~~~VVldVGaGtGpLs~~al~A~ 431 (745)
T 3ua3_A 386 QIKYDVYGEAVVGALKDLGAD---------------GRKTVVIYLLGGGRGPIGTKILKSE 431 (745)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT---------------CCSEEEEEEESCTTCHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHhhcc---------------cCCCcEEEEECCCCCHHHHHHHHHH
Confidence 456677777777765554321 1346899999999999998766544
|
| >2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=81.17 E-value=0.71 Score=42.45 Aligned_cols=24 Identities=29% Similarity=0.293 Sum_probs=20.8
Q ss_pred CCceEEeeecCCCCcccHHHHHHH
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNI 84 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~i 84 (367)
.+.++|+|+|||+|.|++.+++..
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~ 82 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAF 82 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHH
T ss_pred CCCCEEEEECCChHHHHHHHHHHH
Confidence 457999999999999999987654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 367 | ||||
| d1m6ex_ | 359 | c.66.1.35 (X:) Salicylic acid carboxyl methyltrans | 1e-112 |
| >d1m6ex_ c.66.1.35 (X:) Salicylic acid carboxyl methyltransferase (SAMT) {Clarkia breweri [TaxId: 36903]} Length = 359 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Salicylic acid carboxyl methyltransferase (SAMT) domain: Salicylic acid carboxyl methyltransferase (SAMT) species: Clarkia breweri [TaxId: 36903]
Score = 329 bits (846), Expect = e-112
Identities = 120/374 (32%), Positives = 183/374 (48%), Gaps = 35/374 (9%)
Query: 8 NLTEAYPMVGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIA 67
++ + M GG SYA NS QR V+ K + AI + IA
Sbjct: 2 DVRQVLHMKGGAGENSYAMNSFIQRQVISITKPITEAAITALYSGDTVT-----TRLAIA 56
Query: 68 DLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP 127
DLGCS GPN L AV +I+ +E ++ + ++ E+Q+FLND NDFN +F+SLP
Sbjct: 57 DLGCSSGPNALFAVTELIKTVEELRKK----MGRENSPEYQIFLNDLPGNDFNAIFRSLP 112
Query: 128 HARK----YFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSI 183
F G+PGSF+ RLFPR+++HF+H+SY+L WLS+VP I + +
Sbjct: 113 IENDVDGVCFINGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANT- 171
Query: 184 QCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVF 243
V+ AY Q++ D FL RA+E+VPGG MVL + S ++
Sbjct: 172 ----CPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILG-RRSEDRASTECCLIW 226
Query: 244 NNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLSQPR- 302
L N + G++ EEK+D FN+P Y +P E+EA I G+F I+ +E
Sbjct: 227 QL-LAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWS 285
Query: 303 -----------RRITANEYASGIRAGIDGLIKKHFGDEFVDEIFNYFTTKVEENYSIIEE 351
A +RA + L+ HFG+ ++++F+ + + E S +E
Sbjct: 286 SCTKDGDGGGSVEEEGYNVARCMRAVAEPLLLDHFGEAIIEDVFHRYKLLIIERMS--KE 343
Query: 352 KIRNVSNLFISLKR 365
K + + N+ +SL R
Sbjct: 344 KTKFI-NVIVSLIR 356
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 367 | |||
| d1m6ex_ | 359 | Salicylic acid carboxyl methyltransferase (SAMT) { | 100.0 | |
| d1vl5a_ | 231 | Hypothetical protein BH2331 {Bacillus halodurans [ | 99.37 | |
| d1xxla_ | 234 | Hypothetical protein YcgJ {Bacillus subtilis [TaxI | 99.37 | |
| d2a14a1 | 257 | Indolethylamine N-methyltransferase, INMT {Human ( | 99.26 | |
| d2o57a1 | 282 | Putative sarcosine dimethylglycine methyltransfera | 99.25 | |
| d1xtpa_ | 254 | Hypothetical protein Lmaj004091aaa (LmjF30.0810) { | 99.25 | |
| d1jqea_ | 280 | Histamine methyltransferase {Human (Homo sapiens) | 99.19 | |
| d2fk8a1 | 280 | Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri | 99.17 | |
| d2ex4a1 | 222 | Adrenal gland protein AD-003 (C9orf32) {Human (Hom | 99.16 | |
| d2g72a1 | 263 | Phenylethanolamine N-methyltransferase, PNMTase {H | 99.15 | |
| d1tw3a2 | 253 | Carminomycin 4-O-methyltransferase {Streptomyces p | 99.14 | |
| d1vlma_ | 208 | Possible histamine N-methyltransferase TM1293 {The | 99.11 | |
| d1im8a_ | 225 | Hypothetical protein HI0319 (YecO) {Haemophilus in | 99.07 | |
| d1kpia_ | 291 | CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} | 99.07 | |
| d1ve3a1 | 226 | Hypothetical protein PH0226 {Archaeon Pyrococcus h | 99.06 | |
| d1nkva_ | 245 | Hypothetical Protein YjhP {Escherichia coli [TaxId | 99.04 | |
| d1kpga_ | 285 | CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | 99.03 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 98.96 | |
| d2p7ia1 | 225 | Hypothetical protein ECA1738 {Erwinia carotovora [ | 98.95 | |
| d1qzza2 | 256 | Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu | 98.94 | |
| d2bzga1 | 229 | Thiopurine S-methyltransferase {Human (Homo sapien | 98.93 | |
| d1fp1d2 | 244 | Chalcone O-methyltransferase {Alfalfa (Medicago sa | 98.79 | |
| d2i6ga1 | 198 | Putative methyltransferase TehB {Salmonella typhim | 98.76 | |
| d1y8ca_ | 246 | Putative methyltransferase CAC2371 {Clostridium ac | 98.74 | |
| d1wzna1 | 251 | Hypothetical methyltransferase PH1305 {Archaeon Py | 98.74 | |
| d2avna1 | 246 | Hypothetical methyltransferase TM1389 {Thermotoga | 98.71 | |
| d1ri5a_ | 252 | mRNA cap (Guanine N-7) methyltransferase {Fungus ( | 98.66 | |
| d2gh1a1 | 281 | Methyltransferase BC2162 {Bacillus cereus [TaxId: | 98.63 | |
| d1fp2a2 | 244 | Isoflavone O-methyltransferase {Alfalfa (Medicago | 98.59 | |
| d1p91a_ | 268 | rRNA methyltransferase RlmA {Escherichia coli [Tax | 98.56 | |
| d1kyza2 | 243 | Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltra | 98.48 | |
| d1g6q1_ | 328 | Arginine methyltransferase, HMT1 {Baker's yeast (S | 98.3 | |
| d2fcaa1 | 204 | tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil | 98.24 | |
| d1dusa_ | 194 | Hypothetical protein MJ0882 {Archaeon Methanococcu | 98.22 | |
| d1xvaa_ | 292 | Glycine N-methyltransferase {Rat (Rattus norvegicu | 98.2 | |
| d1oria_ | 316 | Protein arginine N-methyltransferase 1, PRMT1 {Rat | 98.15 | |
| d1dl5a1 | 213 | Protein-L-isoaspartyl O-methyltransferase {Thermot | 98.14 | |
| d1g8sa_ | 230 | Fibrillarin homologue {Archaeon Methanococcus jann | 98.09 | |
| d1yb2a1 | 250 | Hypothetical protein Ta0852 {Thermoplasma acidophi | 98.05 | |
| d2nxca1 | 254 | PrmA-like protein TTHA0656 (TT0836) {Thermus therm | 98.04 | |
| d1yzha1 | 204 | tRNA (guanine-N(7)-)-methyltransferase TrmB {Strep | 98.03 | |
| d2fyta1 | 311 | Protein arginine N-methyltransferase 3, PRMT3 {Hum | 98.02 | |
| d1l3ia_ | 186 | Precorrin-6Y methyltransferase (CbiT) {Archaeon Me | 97.98 | |
| d1g8aa_ | 227 | Fibrillarin homologue {Archaeon Pyrococcus horikos | 97.9 | |
| d1i9ga_ | 264 | Probable methyltransferase Rv2118c {Mycobacterium | 97.88 | |
| d1zx0a1 | 229 | Guanidinoacetate methyltransferase {Human (Homo sa | 97.86 | |
| d1nt2a_ | 209 | Fibrillarin homologue {Archaeon Archaeoglobus fulg | 97.83 | |
| d1i1na_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Human ( | 97.75 | |
| d1nw3a_ | 328 | Catalytic, N-terminal domain of histone methyltran | 97.72 | |
| d1o54a_ | 266 | Hypothetical protein TM0748 {Thermotoga maritima [ | 97.65 | |
| d1vbfa_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Sulfolo | 97.61 | |
| d1af7a2 | 193 | Chemotaxis receptor methyltransferase CheR, C-term | 97.5 | |
| d2b3ta1 | 274 | N5-glutamine methyltransferase, HemK {Escherichia | 97.45 | |
| d1u2za_ | 406 | Catalytic, N-terminal domain of histone methyltran | 97.43 | |
| d2b25a1 | 324 | Hypothetical protein FLJ20628 {Human (Homo sapiens | 97.03 | |
| d1jg1a_ | 215 | Protein-L-isoaspartyl O-methyltransferase {Archaeo | 96.91 | |
| d1wxxa2 | 318 | Hypothetical protein TTHA1280, middle and C-termin | 96.74 | |
| d1m6ya2 | 192 | TM0872, methyltransferase domain {Thermotoga marit | 96.62 | |
| d2as0a2 | 324 | Hypothetical protein PH1915, middle and C-terminal | 96.46 | |
| d2esra1 | 152 | Putative methyltransferase SPy1538 {Streptococcus | 96.33 | |
| d1r18a_ | 223 | Protein-L-isoaspartyl O-methyltransferase {Fruit f | 96.31 | |
| d1ws6a1 | 171 | Methyltransferase TTHA0928 {Thermus thermophilus [ | 96.06 | |
| d2frna1 | 260 | Hypothetical protein PH0793 {Pyrococcus horikoshii | 95.72 | |
| d2fpoa1 | 183 | Methylase YhhF {Escherichia coli [TaxId: 562]} | 95.7 | |
| d2igta1 | 309 | Putative methyltransferase Atu0340 {Agrobacterium | 95.4 | |
| d2f8la1 | 328 | Hypothetical protein Lmo1582 {Listeria monocytogen | 95.36 | |
| d2ih2a1 | 223 | DNA methylase TaqI, N-terminal domain {Thermus aqu | 95.01 | |
| d2h00a1 | 250 | Methyltransferase 10 domain containing protein MET | 94.75 | |
| d2fhpa1 | 182 | Putative methylase EF2452 {Enterococcus faecalis [ | 94.4 | |
| d1ne2a_ | 197 | Hypothetical protein Ta1320 {Archaeon Thermoplasma | 94.08 | |
| d2b78a2 | 317 | Hypothetical protein SMu776, middle and C-terminal | 93.94 | |
| d1wy7a1 | 201 | Hypothetical protein PH1948 {Archaeon Pyrococcus h | 93.88 | |
| d1nv8a_ | 271 | N5-glutamine methyltransferase, HemK {Thermotoga m | 92.57 | |
| d1ej0a_ | 180 | RNA methyltransferase FtsJ {Escherichia coli [TaxI | 92.2 | |
| d2ifta1 | 183 | Putative methylase HI0767 {Haemophilus influenzae | 91.92 | |
| d1qama_ | 235 | rRNA adenine dimethylase {Bacillus subtilis, Ermc' | 91.8 | |
| d1uira_ | 312 | Spermidine synthase {Thermus thermophilus [TaxId: | 91.27 | |
| d1susa1 | 227 | Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag | 91.03 | |
| d2avda1 | 219 | COMT domain-containing protein 1, COMTD1 {Human (H | 89.62 | |
| d1g60a_ | 256 | Methyltransferase mboII {Moraxella bovis [TaxId: 4 | 88.48 | |
| d1mjfa_ | 276 | Putative spermidine synthetase PF0127 (SpeE) {Arch | 87.37 | |
| d2okca1 | 425 | Type I restriction enzyme StySJI M protein {Bacter | 87.07 | |
| d1sqga2 | 284 | Ribosomal RNA small subunit methyltransferase B, R | 86.3 | |
| d1qyra_ | 252 | High level kasugamycin resistance protein KsgA {Es | 86.28 | |
| d1inla_ | 295 | Spermidine synthase {Thermotoga maritima [TaxId: 2 | 84.94 | |
| d1yuba_ | 245 | rRNA adenine dimethylase {Streptococcus pneumoniae | 84.49 | |
| d1ixka_ | 313 | Hypothetical methyltransferase PH1374 {Archaeon Py | 83.84 | |
| d1iy9a_ | 274 | Spermidine synthase {Bacillus subtilis [TaxId: 142 | 82.39 | |
| d1eg2a_ | 279 | m.RsrI N6 adenosine-specific DNA methyltransferase | 80.58 |
| >d1m6ex_ c.66.1.35 (X:) Salicylic acid carboxyl methyltransferase (SAMT) {Clarkia breweri [TaxId: 36903]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Salicylic acid carboxyl methyltransferase (SAMT) domain: Salicylic acid carboxyl methyltransferase (SAMT) species: Clarkia breweri [TaxId: 36903]
Probab=100.00 E-value=2e-96 Score=718.48 Aligned_cols=341 Identities=36% Similarity=0.601 Sum_probs=310.3
Q ss_pred CCccceecccCCCCCchHHHhhHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCceEEeeecCCCCcccHHHHHHHHH
Q 017702 7 NNLTEAYPMVGGDDAYSYANNSTYQRGVVDAAKELISEAIADKLDLKILGFDDTLKPFKIADLGCSVGPNTLLAVQNIIE 86 (367)
Q Consensus 7 ~~~~~~~~M~gg~g~~sY~~nS~~Q~~~~~~~~~ll~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~nT~~~~~~ii~ 86 (367)
|++++++||+||+|++||++||..|++++..++|+|++||.+++.... .+++++|||||||+|+||+.+|+.||+
T Consensus 1 m~~~~~l~M~gG~G~~SYa~NS~~Q~~~i~~~kp~leeai~~~~~~~~-----~~~~~~IADlGCS~G~Ntl~~v~~iI~ 75 (359)
T d1m6ex_ 1 MDVRQVLHMKGGAGENSYAMNSFIQRQVISITKPITEAAITALYSGDT-----VTTRLAIADLGCSSGPNALFAVTELIK 75 (359)
T ss_dssp CCCHHHHCCCCCTTSTTTTSSCHHHHHHHHHTHHHHHHHHHHHHSSSS-----SSSEECCEEESCCSSTTTTTGGGTTHH
T ss_pred CCccEeeccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC-----CCCceEEEEeCCCCCccHHHHHHHHHH
Confidence 789999999999999999999999999999999999999998654221 456899999999999999999999999
Q ss_pred HHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCcc----ccceeeccCccccccCCCCCceeEEEecccccc
Q 017702 87 AIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHA----RKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHW 162 (367)
Q Consensus 87 ~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~----~~~f~~gvp~SFy~~l~P~~svd~~~S~~alhW 162 (367)
+|+++|++.+.. ++| ||||||||||+||||+||++|+.. ++||++|||||||+||||++|+||+||++||||
T Consensus 76 ~i~~~~~~~~~~-~~p---e~qvf~nDLP~NDFNtLF~~L~~~~~~~~~~f~~gvpGSFY~rLfP~~Slh~~~Ss~alHW 151 (359)
T d1m6ex_ 76 TVEELRKKMGRE-NSP---EYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFYGRLFPRNTLHFIHSSYSLMW 151 (359)
T ss_dssp HHHHHHHSSSCS-SCC---EEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSSSCCSCTTCBSCEEEESCTTB
T ss_pred HHHHHHHhcCCC-CCC---eEEEEeCCCCcchHHHHHHhccccccCCCCeEEEecCCchhhhcCCCCceEEeeehhhhhh
Confidence 999999865432 257 999999999999999999999863 469999999999999999999999999999999
Q ss_pred ccCCCccccCCCCCCCCCCcccccC-CCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEEEEeecccCCCCCCCCCchh
Q 017702 163 LSKVPKEIVDPCSPAWNKGSIQCSE-SNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVG 241 (367)
Q Consensus 163 Ls~~P~~~~~~~~~~~n~g~i~~~~-~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g~~~n~~~~~~~~~~ 241 (367)
||++|+.+.+ |||+||+.+ ++++|.+||++||++||..||++||+||+|||+||++++| |++..+.+ ++..
T Consensus 152 LS~vP~~l~~------n~~~i~~~~~~~~~v~~ay~~Qf~~D~~~FL~~Ra~ELv~GG~mvl~~~g-r~~~~~~~-~~~~ 223 (359)
T d1m6ex_ 152 LSQVPIGIES------NKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILG-RRSEDRAS-TECC 223 (359)
T ss_dssp CSSCCSCCCC------CTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEE-CSSSSSSS-TTTS
T ss_pred hhcCCccccC------CCCcEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEEEec-cCCCCCCC-Cccc
Confidence 9999998865 778888765 6788899999999999999999999999999999999999 88776544 4567
Q ss_pred hHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEEecCCC------------CCCHHH
Q 017702 242 VFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLSQPRR------------RITANE 309 (367)
Q Consensus 242 ~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~~~p~~------------~~~~~~ 309 (367)
.+|++|.++|++||.+|+|++|++|+||+|+|+||++|++++|+++|+|+|+++|.++.++. ...++.
T Consensus 224 ~~~~~l~~al~dmv~eGlI~eek~dsfn~P~Y~ps~eEv~~~ie~~gsF~i~~~e~~~~~~~~~~~~~~~~~d~~~~~~~ 303 (359)
T d1m6ex_ 224 LIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWSSCTKDGDGGGSVEEEGYN 303 (359)
T ss_dssp TTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEEEEEEETTCCSSCTTCCSSTTTTTTH
T ss_pred hHHHHHHHHHHHHHHcCCCCHHHHHhccCccccCCHHHHHHHhccCCCeeeeeeEeeecccccccccccccccHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999876521 124678
Q ss_pred HHHhHHhhhhhhhhhccCHHHHHHHHHHHHHHHHhhhhHHHHhcCCeEEEEEEEEecC
Q 017702 310 YASGIRAGIDGLIKKHFGDEFVDEIFNYFTTKVEENYSIIEEKIRNVSNLFISLKRFA 367 (367)
Q Consensus 310 v~~~iRa~~~~~l~~~~~~~~~de~f~ry~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 367 (367)
+++++||+.+|++.+|||++++|+||+||++++++++++ ...++++++++|+|||
T Consensus 304 ~a~~~RA~~e~~l~~hfg~~i~D~lF~r~~~~v~~~~~~---~~~~~~~~~~sL~rK~ 358 (359)
T d1m6ex_ 304 VARCMRAVAEPLLLDHFGEAIIEDVFHRYKLLIIERMSK---EKTKFINVIVSLIRKS 358 (359)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHS---SCCEEEEEEEEEEBCC
T ss_pred HHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHhhHhh---cCCceEEEEEEEEecC
Confidence 999999999999999999999999999999999999884 5677999999999997
|
| >d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein BH2331 species: Bacillus halodurans [TaxId: 86665]
Probab=99.37 E-value=4.2e-12 Score=113.08 Aligned_cols=155 Identities=14% Similarity=0.195 Sum_probs=98.4
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHH---HhhcCCccccceeecc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNT---LFKSLPHARKYFAAGL 137 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~---lf~~l~~~~~~f~~gv 137 (367)
.+.-+|+|+|||+|..|..+... -+ +|+-.|+..+--.. .++.....+--|..+
T Consensus 14 ~~~~rVLDiGcG~G~~~~~l~~~-----------------~~-----~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~- 70 (231)
T d1vl5a_ 14 KGNEEVLDVATGGGHVANAFAPF-----------------VK-----KVVAFDLTEDILKVARAFIEGNGHQQVEYVQG- 70 (231)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGG-----------------SS-----EEEEEESCHHHHHHHHHHHHHTTCCSEEEEEC-
T ss_pred CCcCEEEEecccCcHHHHHHHHh-----------------CC-----EEEEEECCHHHHhhhhhccccccccccccccc-
Confidence 44579999999999999876411 12 46666775422111 111111112224444
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
+..+--+|++++|+++|..++||+. |...+|+.-++-|+|
T Consensus 71 --d~~~l~~~~~~fD~v~~~~~l~~~~--------------------------------------d~~~~l~~~~r~Lkp 110 (231)
T d1vl5a_ 71 --DAEQMPFTDERFHIVTCRIAAHHFP--------------------------------------NPASFVSEAYRVLKK 110 (231)
T ss_dssp --CC-CCCSCTTCEEEEEEESCGGGCS--------------------------------------CHHHHHHHHHHHEEE
T ss_pred --ccccccccccccccccccccccccC--------------------------------------CHHHHHHHHHHhcCC
Confidence 3444447899999999999999974 444689999999999
Q ss_pred CceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEE
Q 017702 218 GGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEK 297 (367)
Q Consensus 218 GG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~ 297 (367)
||+|++..+. .++. ..++.+.+.+......+ .....+.+++.+.+++.| |++++++.
T Consensus 111 gG~l~i~~~~-~~~~---------~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~l~~aG-f~~~~~~~ 167 (231)
T d1vl5a_ 111 GGQLLLVDNS-APEN---------DAFDVFYNYVEKERDYS------------HHRAWKKSDWLKMLEEAG-FELEELHC 167 (231)
T ss_dssp EEEEEEEEEE-BCSS---------HHHHHHHHHHHHHHCTT------------CCCCCBHHHHHHHHHHHT-CEEEEEEE
T ss_pred CcEEEEEeCC-CCCC---------HHHHHHHHHHHhhcccC------------cccCCCHHHHHHHHHHCC-CEEEEEEE
Confidence 9999998776 4432 12233333322211111 123567899999999997 99988887
Q ss_pred EecC
Q 017702 298 LSQP 301 (367)
Q Consensus 298 ~~~p 301 (367)
+..+
T Consensus 168 ~~~~ 171 (231)
T d1vl5a_ 168 FHKT 171 (231)
T ss_dssp EEEE
T ss_pred eecC
Confidence 7544
|
| >d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein YcgJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.37 E-value=1.8e-11 Score=109.87 Aligned_cols=154 Identities=18% Similarity=0.267 Sum_probs=96.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHH---HhhcCCccccceeeccC
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNT---LFKSLPHARKYFAAGLP 138 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~---lf~~l~~~~~~f~~gvp 138 (367)
.--||+|+|||+|..|..+.+.. + +|+--|+..+--.. ..+.....+-.|..+.
T Consensus 16 ~~~rILDiGcGtG~~~~~la~~~-----------------~-----~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d- 72 (234)
T d1xxla_ 16 AEHRVLDIGAGAGHTALAFSPYV-----------------Q-----ECIGVDATKEMVEVASSFAQEKGVENVRFQQGT- 72 (234)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGS-----------------S-----EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECB-
T ss_pred CCCEEEEeCCcCcHHHHHHHHhC-----------------C-----eEEEEeCChhhhhhhhhhhcccccccccccccc-
Confidence 34799999999999998775211 1 34555555322111 1111111123344443
Q ss_pred ccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccC
Q 017702 139 GSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPG 218 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 218 (367)
..+--+|++++|+++|+.++||+. |...+|+...+-||||
T Consensus 73 --~~~~~~~~~~fD~v~~~~~l~~~~--------------------------------------d~~~~l~~~~r~Lkpg 112 (234)
T d1xxla_ 73 --AESLPFPDDSFDIITCRYAAHHFS--------------------------------------DVRKAVREVARVLKQD 112 (234)
T ss_dssp --TTBCCSCTTCEEEEEEESCGGGCS--------------------------------------CHHHHHHHHHHHEEEE
T ss_pred --cccccccccccceeeeeceeeccc--------------------------------------CHHHHHHHHHHeeCCC
Confidence 233346899999999999999965 3346899999999999
Q ss_pred ceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEE
Q 017702 219 GLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKL 298 (367)
Q Consensus 219 G~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~ 298 (367)
|++++.... .++. ..++.+.+.+..... .......+..+++.++++.| |.+..++.+
T Consensus 113 G~~~~~~~~-~~~~---------~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~g-f~~~~~~~~ 169 (234)
T d1xxla_ 113 GRFLLVDHY-APED---------PVLDEFVNHLNRLRD------------PSHVRESSLSEWQAMFSANQ-LAYQDIQKW 169 (234)
T ss_dssp EEEEEEEEC-BCSS---------HHHHHHHHHHHHHHC------------TTCCCCCBHHHHHHHHHHTT-EEEEEEEEE
T ss_pred cEEEEEEcC-CCCC---------HHHHHHHHHHHhhCC------------CcccccCCHHHHHHHHHHCC-CceeEEEEe
Confidence 999998776 4431 112222222221111 11222447899999999997 999999887
Q ss_pred ecC
Q 017702 299 SQP 301 (367)
Q Consensus 299 ~~p 301 (367)
..+
T Consensus 170 ~~~ 172 (234)
T d1xxla_ 170 NLP 172 (234)
T ss_dssp EEE
T ss_pred eCc
Confidence 665
|
| >d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arylamine N-methyltransferase domain: Indolethylamine N-methyltransferase, INMT species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.26 E-value=7.2e-12 Score=113.31 Aligned_cols=99 Identities=18% Similarity=0.100 Sum_probs=75.5
Q ss_pred cCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhc
Q 017702 137 LPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELV 216 (367)
Q Consensus 137 vp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~ 216 (367)
+..+.....++.+++|+++|..++||+...+ .|+..+|+..++-||
T Consensus 139 ~~~~~~~~~~~~~~fD~i~~~~~l~~~~~~~----------------------------------~~~~~~l~~i~~~Lk 184 (257)
T d2a14a1 139 VHLGNPLAPAVLPLADCVLTLLAMECACCSL----------------------------------DAYRAALCNLASLLK 184 (257)
T ss_dssp TTSSSTTTTCCCCCEEEEEEESCHHHHCSSH----------------------------------HHHHHHHHHHHTTEE
T ss_pred cccccccccccCCcccEEeehhhHHHhcccH----------------------------------HHHHHHHHHHHhccC
Confidence 3344445677889999999999999976432 377889999999999
Q ss_pred cCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEE
Q 017702 217 PGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKME 296 (367)
Q Consensus 217 pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE 296 (367)
|||+|++.... ..+... ......+.++.+.++++++|+++| |+|+.++
T Consensus 185 pGG~li~~~~~-~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~ 232 (257)
T d2a14a1 185 PGGHLVTTVTL-RLPSYM------------------------------VGKREFSCVALEKGEVEQAVLDAG-FDIEQLL 232 (257)
T ss_dssp EEEEEEEEEES-SCCEEE------------------------------ETTEEEECCCCCHHHHHHHHHHTT-EEEEEEE
T ss_pred CCcEEEEEEec-ccccce------------------------------eccccccccCCCHHHHHHHHHHCC-CEEEEEE
Confidence 99999998886 333210 112235667889999999999997 9999998
Q ss_pred EEecC
Q 017702 297 KLSQP 301 (367)
Q Consensus 297 ~~~~p 301 (367)
.....
T Consensus 233 ~~~~~ 237 (257)
T d2a14a1 233 HSPQS 237 (257)
T ss_dssp EECCC
T ss_pred Eeccc
Confidence 76543
|
| >d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Putative sarcosine dimethylglycine methyltransferase species: Red algae (Galdieria sulphuraria) [TaxId: 130081]
Probab=99.25 E-value=8.7e-10 Score=101.48 Aligned_cols=148 Identities=16% Similarity=0.144 Sum_probs=91.6
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC----Cc-cccceee
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL----PH-ARKYFAA 135 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l----~~-~~~~f~~ 135 (367)
++..+|+|+|||+|..+..+.+.. ..+|+--|+...- -...+.. .- .+--|..
T Consensus 66 ~~~~~vLDiGcG~G~~~~~la~~~---------------------~~~v~gvD~s~~~-i~~a~~~~~~~gl~~~v~~~~ 123 (282)
T d2o57a1 66 QRQAKGLDLGAGYGGAARFLVRKF---------------------GVSIDCLNIAPVQ-NKRNEEYNNQAGLADNITVKY 123 (282)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH---------------------CCEEEEEESCHHH-HHHHHHHHHHHTCTTTEEEEE
T ss_pred CCCCEEEEeCCCCcHHHhhhhccC---------------------CcEEEEEeccchh-hhhhhcccccccccccccccc
Confidence 345899999999999887765322 1245666665322 1111111 00 1222444
Q ss_pred ccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhh
Q 017702 136 GLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEEL 215 (367)
Q Consensus 136 gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL 215 (367)
+ ++.+--+|++++|+|+|..++||+. |...+|+.-.+-|
T Consensus 124 ~---d~~~l~~~~~sfD~V~~~~~l~h~~--------------------------------------d~~~~l~~~~~~L 162 (282)
T d2o57a1 124 G---SFLEIPCEDNSYDFIWSQDAFLHSP--------------------------------------DKLKVFQECARVL 162 (282)
T ss_dssp C---CTTSCSSCTTCEEEEEEESCGGGCS--------------------------------------CHHHHHHHHHHHE
T ss_pred c---ccccccccccccchhhccchhhhcc--------------------------------------CHHHHHHHHHHhc
Confidence 4 3555557899999999999999854 3346899999999
Q ss_pred ccCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEE
Q 017702 216 VPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKM 295 (367)
Q Consensus 216 ~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~l 295 (367)
+|||+|++.... ..+.... ..+ . ..+.. ...| ..++.+++++++++.| |+....
T Consensus 163 kpgG~l~~~~~~-~~~~~~~-----~~~-~---~~~~~--------------~~~~-~~~s~~~~~~~l~~~G-f~~i~~ 216 (282)
T d2o57a1 163 KPRGVMAITDPM-KEDGIDK-----SSI-Q---PILDR--------------IKLH-DMGSLGLYRSLAKECG-LVTLRT 216 (282)
T ss_dssp EEEEEEEEEEEE-ECTTCCG-----GGG-H---HHHHH--------------HTCS-SCCCHHHHHHHHHHTT-EEEEEE
T ss_pred CCCcEEEEEEee-cCCCCch-----hHH-H---HHHHH--------------hccC-CCCCHHHHHHHHHHcC-CceEEE
Confidence 999999998765 4332211 111 1 11111 1111 2568899999999997 877665
Q ss_pred EE
Q 017702 296 EK 297 (367)
Q Consensus 296 E~ 297 (367)
+.
T Consensus 217 ~d 218 (282)
T d2o57a1 217 FS 218 (282)
T ss_dssp EE
T ss_pred EE
Confidence 44
|
| >d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: AD-003 protein-like domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810) species: Leishmania major [TaxId: 5664]
Probab=99.25 E-value=1.9e-11 Score=111.96 Aligned_cols=145 Identities=14% Similarity=0.181 Sum_probs=93.5
Q ss_pred CCCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhc-CCcccc-ceeecc
Q 017702 60 TLKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKS-LPHARK-YFAAGL 137 (367)
Q Consensus 60 ~~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~-l~~~~~-~f~~gv 137 (367)
..+..+|+|+|||+|..|..++... . . +|..-|.... +-...+. +...+. -|..+
T Consensus 91 ~~~~~~vLD~GcG~G~~t~~ll~~~-----------------~---~-~v~~vD~s~~-~l~~a~~~~~~~~~~~~~~~- 147 (254)
T d1xtpa_ 91 GHGTSRALDCGAGIGRITKNLLTKL-----------------Y---A-TTDLLEPVKH-MLEEAKRELAGMPVGKFILA- 147 (254)
T ss_dssp TCCCSEEEEETCTTTHHHHHTHHHH-----------------C---S-EEEEEESCHH-HHHHHHHHTTTSSEEEEEES-
T ss_pred CCCCCeEEEecccCChhhHHHHhhc-----------------C---c-eEEEEcCCHH-HHHhhhccccccccceeEEc-
Confidence 3456899999999999998776322 1 2 4556566532 2222222 222111 13332
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
++.+--++++++|+|+|..++||+.+ .|+..||+..++-|+|
T Consensus 148 --d~~~~~~~~~~fD~I~~~~vl~hl~d------------------------------------~d~~~~l~~~~~~Lkp 189 (254)
T d1xtpa_ 148 --SMETATLPPNTYDLIVIQWTAIYLTD------------------------------------ADFVKFFKHCQQALTP 189 (254)
T ss_dssp --CGGGCCCCSSCEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHEEE
T ss_pred --cccccccCCCccceEEeeccccccch------------------------------------hhhHHHHHHHHHhcCC
Confidence 23344467899999999999999752 2677899999999999
Q ss_pred CceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEE
Q 017702 218 GGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEK 297 (367)
Q Consensus 218 GG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~ 297 (367)
||++++.... ...... + .+ -.-+..+++.++++++++++| |+|.+.+.
T Consensus 190 gG~iii~e~~-~~~~~~-------------------------~----~d-~~d~~~~rs~~~~~~l~~~aG-f~ii~~~~ 237 (254)
T d1xtpa_ 190 NGYIFFKENC-STGDRF-------------------------L----VD-KEDSSLTRSDIHYKRLFNESG-VRVVKEAF 237 (254)
T ss_dssp EEEEEEEEEB-C--CCE-------------------------E----EE-TTTTEEEBCHHHHHHHHHHHT-CCEEEEEE
T ss_pred CcEEEEEecC-CCCCcc-------------------------e----ec-ccCCceeCCHHHHHHHHHHcC-CEEEEEEe
Confidence 9999987654 221110 0 00 012345789999999999997 98876553
|
| >d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Histamine methyltransferase domain: Histamine methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.19 E-value=1.7e-10 Score=106.07 Aligned_cols=159 Identities=14% Similarity=0.156 Sum_probs=93.3
Q ss_pred CCCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchH---HHhhcCCccccc-ee-
Q 017702 60 TLKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFN---TLFKSLPHARKY-FA- 134 (367)
Q Consensus 60 ~~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn---~lf~~l~~~~~~-f~- 134 (367)
..+.++|+|+|||+|..|..++..+. ..+. .. .+.++--|...+... ..+...+....+ |-
T Consensus 38 ~~~~~~VLDiGcG~G~~~~~ll~~l~----~~~~-------~~---~~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~ 103 (280)
T d1jqea_ 38 TKSEIKILSIGGGAGEIDLQILSKVQ----AQYP-------GV---CINNEVVEPSAEQIAKYKELVAKISNLENVKFAW 103 (280)
T ss_dssp TCSEEEEEEETCTTSHHHHHHHHHHH----HHST-------TC---EEEEEEECCCHHHHHHHHHHHTTCCSCTTEEEEE
T ss_pred CCCCCeEEEEcCCCCHHHHHHHHHhh----hhcc-------CC---ceEEEEEeCcHHHHHHHHHHHhhccccccccccc
Confidence 34568999999999999888875552 2221 12 456677776543222 222222211111 10
Q ss_pred eccCc-cc---cccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHH
Q 017702 135 AGLPG-SF---HSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNA 210 (367)
Q Consensus 135 ~gvp~-SF---y~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~ 210 (367)
...+. +| ...-.+++++|+|+|..++||+. |...+|+.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~fD~I~~~~~l~~~~--------------------------------------d~~~~l~~ 145 (280)
T d1jqea_ 104 HKETSSEYQSRMLEKKELQKWDFIHMIQMLYYVK--------------------------------------DIPATLKF 145 (280)
T ss_dssp ECSCHHHHHHHHTTSSSCCCEEEEEEESCGGGCS--------------------------------------CHHHHHHH
T ss_pred hhhhhhhhcchhcccCCCCceeEEEEccceecCC--------------------------------------CHHHHHHH
Confidence 01111 11 13456889999999999999965 33468999
Q ss_pred HHHhhccCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCce
Q 017702 211 RAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNF 290 (367)
Q Consensus 211 Ra~EL~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F 290 (367)
..+-|+|||.|++.... ... ...+ .+..+...- . .. ....+++.+++..++++.| |
T Consensus 146 l~~~LkpgG~l~i~~~~-~~~----------~~~~----l~~~~~~~~-~-----~~--~~~~~~~~~~~~~~L~~~G-~ 201 (280)
T d1jqea_ 146 FHSLLGTNAKMLIIVVS-GSS----------GWDK----LWKKYGSRF-P-----QD--DLCQYITSDDLTQMLDNLG-L 201 (280)
T ss_dssp HHHTEEEEEEEEEEEEC-TTS----------HHHH----HHHHHGGGS-C-----CC--TTSCCCCHHHHHHHHHHHT-C
T ss_pred HHhhCCCCCEEEEEEec-Ccc----------hHHH----HHHHHHHhc-C-----CC--cccccCCHHHHHHHHHHCC-C
Confidence 99999999999998875 221 1112 222222111 0 01 1122567899999999987 7
Q ss_pred EEeE
Q 017702 291 TIEK 294 (367)
Q Consensus 291 ~I~~ 294 (367)
..+.
T Consensus 202 ~~~~ 205 (280)
T d1jqea_ 202 KYEC 205 (280)
T ss_dssp CEEE
T ss_pred ceEE
Confidence 6543
|
| >d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Methoxy mycolic acid synthase 4, Mma4 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.17 E-value=7.4e-10 Score=102.73 Aligned_cols=160 Identities=12% Similarity=0.089 Sum_probs=95.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHH---HhhcCCcc-ccceeecc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNT---LFKSLPHA-RKYFAAGL 137 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~---lf~~l~~~-~~~f~~gv 137 (367)
..-+|+|+|||.|..++.+.+.. + .+|.--|+..+...- ..+..... ...+....
T Consensus 52 ~g~~VLDiGCG~G~~a~~~a~~~-----------------g----~~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~d 110 (280)
T d2fk8a1 52 PGMTLLDIGCGWGTTMRRAVERF-----------------D----VNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQG 110 (280)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH-----------------C----CEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESC
T ss_pred CCCEEEEecCCchHHHHHHHHhC-----------------c----eeEEEecchHHHHHHHHHHHHhhccccchhhhhhh
Confidence 45899999999999887765322 1 245666666544322 11111111 11223333
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
|. .+++++|.++|..+++.+.+ +++..||+.-++-|||
T Consensus 111 ----~~--~~~~~fD~i~si~~~eh~~~------------------------------------~~~~~~f~~i~~~Lkp 148 (280)
T d2fk8a1 111 ----WE--DFAEPVDRIVSIEAFEHFGH------------------------------------ENYDDFFKRCFNIMPA 148 (280)
T ss_dssp ----GG--GCCCCCSEEEEESCGGGTCG------------------------------------GGHHHHHHHHHHHSCT
T ss_pred ----hh--hhccchhhhhHhhHHHHhhh------------------------------------hhHHHHHHHHHhccCC
Confidence 11 24679999999999988542 3677899999999999
Q ss_pred CceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCc-ccCCHHHHHHHHHhCCceEEeEEE
Q 017702 218 GGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPT-YNATPKELEAIIRTNGNFTIEKME 296 (367)
Q Consensus 218 GG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~-y~~s~eE~~~~l~~~g~F~I~~lE 296 (367)
||++++...+ ..+...........-++ ... . .+-+..+.+|. +.||.+|+...++..| |+|...+
T Consensus 149 gG~~~i~~i~-~~~~~~~~~~~~~~~~~----~~~---~-----~dfI~kyifPgg~lPS~~~l~~~~e~aG-f~v~~~~ 214 (280)
T d2fk8a1 149 DGRMTVQSSV-SYHPYEMAARGKKLSFE----TAR---F-----IKFIVTEIFPGGRLPSTEMMVEHGEKAG-FTVPEPL 214 (280)
T ss_dssp TCEEEEEEEE-CCCHHHHHTTCHHHHHH----HHH---H-----HHHHHHHTSTTCCCCCHHHHHHHHHHTT-CBCCCCE
T ss_pred CceEEEEEee-ccCcchhhhcccccccc----ccc---c-----cchhhhhccCCCcccchHhhhhhHHhhc-cccceee
Confidence 9999998876 43311000000000000 000 0 01123345565 5799999999999986 9998877
Q ss_pred EE
Q 017702 297 KL 298 (367)
Q Consensus 297 ~~ 298 (367)
.+
T Consensus 215 ~~ 216 (280)
T d2fk8a1 215 SL 216 (280)
T ss_dssp EC
T ss_pred ec
Confidence 65
|
| >d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: AD-003 protein-like domain: Adrenal gland protein AD-003 (C9orf32) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.16 E-value=4e-11 Score=106.82 Aligned_cols=144 Identities=15% Similarity=0.156 Sum_probs=97.2
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc---cccceeecc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH---ARKYFAAGL 137 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~---~~~~f~~gv 137 (367)
.+..+|+|+|||+|.++..+++. .+ . +|+.-|+..+--...-+.+.. ...-|..
T Consensus 59 ~~~~~vLDiGcG~G~~~~~l~~~-----------------~~---~-~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~-- 115 (222)
T d2ex4a1 59 TGTSCALDCGAGIGRITKRLLLP-----------------LF---R-EVDMVDITEDFLVQAKTYLGEEGKRVRNYFC-- 115 (222)
T ss_dssp CCCSEEEEETCTTTHHHHHTTTT-----------------TC---S-EEEEEESCHHHHHHHHHHTGGGGGGEEEEEE--
T ss_pred CCCCEEEEeccCCCHhhHHHHHh-----------------cC---C-EEEEeecCHHHhhcccccccccccccccccc--
Confidence 45689999999999999876411 12 2 577778765432221112221 1112333
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
+++.+-.++++++|+|+|..++|++.+ .|+..+|+.-++-|+|
T Consensus 116 -~d~~~~~~~~~~fD~I~~~~~l~h~~~------------------------------------~~~~~~l~~i~~~Lk~ 158 (222)
T d2ex4a1 116 -CGLQDFTPEPDSYDVIWIQWVIGHLTD------------------------------------QHLAEFLRRCKGSLRP 158 (222)
T ss_dssp -CCGGGCCCCSSCEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHEEE
T ss_pred -ccccccccccccccccccccccccchh------------------------------------hhhhhHHHHHHHhcCC
Confidence 346666678899999999999999652 2566799999999999
Q ss_pred CceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEE
Q 017702 218 GGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEK 297 (367)
Q Consensus 218 GG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~ 297 (367)
||.+++.... ..+.... + ..-..+.++.++++++++++| |++.+.+.
T Consensus 159 ~G~~~i~~~~-~~~~~~~------------------------------~-~~~~~~~~~~~~~~~l~~~aG-f~ii~~~~ 205 (222)
T d2ex4a1 159 NGIIVIKDNM-AQEGVIL------------------------------D-DVDSSVCRDLDVVRRIICSAG-LSLLAEER 205 (222)
T ss_dssp EEEEEEEEEE-BSSSEEE------------------------------E-TTTTEEEEBHHHHHHHHHHTT-CCEEEEEE
T ss_pred cceEEEEEcc-ccccccc------------------------------c-cCCceeeCCHHHHHHHHHHcC-CEEEEEEE
Confidence 9999998765 3332110 0 012345679999999999997 99987765
|
| >d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arylamine N-methyltransferase domain: Phenylethanolamine N-methyltransferase, PNMTase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.15 E-value=7e-11 Score=108.45 Aligned_cols=98 Identities=15% Similarity=0.206 Sum_probs=74.0
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
++.+...-++++++|++.|++++||++.-+ .|+..+|+..++-|||
T Consensus 145 ~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~----------------------------------~~~~~~l~~~~~~LkP 190 (263)
T d2g72a1 145 PQPLGAGSPAPLPADALVSAFCLEAVSPDL----------------------------------ASFQRALDHITTLLRP 190 (263)
T ss_dssp SSTTCSSCSSCSSEEEEEEESCHHHHCSSH----------------------------------HHHHHHHHHHHTTEEE
T ss_pred CCccccCCcCcCccCeeeeHHHHHHHccCH----------------------------------HHHHHHHHHHHHHcCC
Confidence 344445556778999999999999976432 2677899999999999
Q ss_pred CceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEE
Q 017702 218 GGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEK 297 (367)
Q Consensus 218 GG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~ 297 (367)
||.|++.... ..+... ...-.++.++.+.+|++++|+++| |+|++++.
T Consensus 191 GG~li~~~~~-~~~~~~------------------------------~~~~~~~~~~~t~e~v~~~l~~aG-f~v~~~~~ 238 (263)
T d2g72a1 191 GGHLLLIGAL-EESWYL------------------------------AGEARLTVVPVSEEEVREALVRSG-YKVRDLRT 238 (263)
T ss_dssp EEEEEEEEEE-SCCEEE------------------------------ETTEEEECCCCCHHHHHHHHHHTT-EEEEEEEE
T ss_pred CCEEEEeccc-CCcccc------------------------------cCCcccccCCCCHHHHHHHHHHCC-CeEEEEEE
Confidence 9999998876 332110 011134567889999999999997 99999988
Q ss_pred EecC
Q 017702 298 LSQP 301 (367)
Q Consensus 298 ~~~p 301 (367)
...+
T Consensus 239 ~~~~ 242 (263)
T d2g72a1 239 YIMP 242 (263)
T ss_dssp EECC
T ss_pred eecc
Confidence 7665
|
| >d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Carminomycin 4-O-methyltransferase species: Streptomyces peucetius [TaxId: 1950]
Probab=99.14 E-value=2.6e-10 Score=103.84 Aligned_cols=160 Identities=17% Similarity=0.209 Sum_probs=98.2
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCcc-ccceeeccCc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHA-RKYFAAGLPG 139 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~-~~~f~~gvp~ 139 (367)
.+.-+|+|+|||+|..++.+.+. .| .++++.-|+|. .-...-+.+... ..--+.-++|
T Consensus 79 ~~~~~VLDvGcG~G~~~~~la~~-----------------~p---~~~~~~~D~~~-~~~~a~~~~~~~~~~~rv~~~~~ 137 (253)
T d1tw3a2 79 TNVRHVLDVGGGKGGFAAAIARR-----------------AP---HVSATVLEMAG-TVDTARSYLKDEGLSDRVDVVEG 137 (253)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHH-----------------CT---TCEEEEEECTT-HHHHHHHHHHHTTCTTTEEEEEC
T ss_pred ccCCEEEEeCCCCCHHHHHHHHh-----------------cc---eeEEEEccCHH-HHHHHHHHHHHhhcccchhhccc
Confidence 45679999999999999887632 24 56778888874 111111111110 0111233445
Q ss_pred cccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 140 SFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
+|++. .| .++|+++++++||.+++ .+...+|+.-++-|+|||
T Consensus 138 D~~~~-~~-~~~D~v~~~~vlh~~~d------------------------------------~~~~~~L~~~~~~LkPGG 179 (253)
T d1tw3a2 138 DFFEP-LP-RKADAIILSFVLLNWPD------------------------------------HDAVRILTRCAEALEPGG 179 (253)
T ss_dssp CTTSC-CS-SCEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHTEEEEE
T ss_pred cchhh-cc-cchhheeeccccccCCc------------------------------------hhhHHHHHHHHHhcCCCc
Confidence 67763 33 56899999999996432 244568999999999999
Q ss_pred eEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEEe
Q 017702 220 LMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKLS 299 (367)
Q Consensus 220 ~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~~ 299 (367)
+|++.-.. ....... ......+. +.-|+..| -..||.+||++++++.| |+++++..+.
T Consensus 180 ~l~i~e~~-~~~~~~~-----~~~~~~~d--l~~~~~~~-------------g~~rt~~e~~~ll~~AG-f~~~~v~~~~ 237 (253)
T d1tw3a2 180 RILIHERD-DLHENSF-----NEQFTELD--LRMLVFLG-------------GALRTREKWDGLAASAG-LVVEEVRQLP 237 (253)
T ss_dssp EEEEEECC-BCGGGCC-----SHHHHHHH--HHHHHHHS-------------CCCCBHHHHHHHHHHTT-EEEEEEEEEE
T ss_pred EEEEEecc-CCCCCcc-----hhHHHHhh--HHHHhhCC-------------CcCCCHHHHHHHHHHCC-CeEEEEEECC
Confidence 99886543 2211110 01111111 22222222 12579999999999997 9999988876
Q ss_pred cC
Q 017702 300 QP 301 (367)
Q Consensus 300 ~p 301 (367)
.|
T Consensus 238 ~p 239 (253)
T d1tw3a2 238 SP 239 (253)
T ss_dssp CS
T ss_pred CC
Confidence 66
|
| >d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Possible histamine N-methyltransferase TM1293 species: Thermotoga maritima [TaxId: 2336]
Probab=99.11 E-value=9.7e-10 Score=96.12 Aligned_cols=93 Identities=16% Similarity=0.158 Sum_probs=64.3
Q ss_pred ccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEE
Q 017702 143 SRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMV 222 (367)
Q Consensus 143 ~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lv 222 (367)
.--+|++++|+|+|+.+|||+. |+..+|+.-++-|+|||+|+
T Consensus 84 ~l~~~~~~fD~I~~~~~l~h~~--------------------------------------d~~~~l~~~~~~L~pgG~l~ 125 (208)
T d1vlma_ 84 NLPLKDESFDFALMVTTICFVD--------------------------------------DPERALKEAYRILKKGGYLI 125 (208)
T ss_dssp BCCSCTTCEEEEEEESCGGGSS--------------------------------------CHHHHHHHHHHHEEEEEEEE
T ss_pred cccccccccccccccccccccc--------------------------------------ccccchhhhhhcCCCCceEE
Confidence 3346889999999999999975 33468899999999999999
Q ss_pred EEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEE
Q 017702 223 LILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEK 297 (367)
Q Consensus 223 l~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~ 297 (367)
+..+. ..+. +..+...... ...+..-.+++|.+|+.+++++.| |++.++..
T Consensus 126 i~~~~-~~~~------------------~~~~~~~~~~----~~~~~~~~~~~s~~~l~~~l~~~G-f~~i~v~~ 176 (208)
T d1vlma_ 126 VGIVD-RESF------------------LGREYEKNKE----KSVFYKNARFFSTEELMDLMRKAG-FEEFKVVQ 176 (208)
T ss_dssp EEEEC-SSSH------------------HHHHHHHTTT----C-CCSTTCCCCCHHHHHHHHHHTT-CEEEEEEE
T ss_pred EEecC-Ccch------------------hHHhhhhccc----cccccccccCCCHHHHHHHHHHcC-CeEEEEEE
Confidence 99986 3220 0011111111 112223345789999999999997 98877655
|
| >d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein HI0319 (YecO) domain: Hypothetical protein HI0319 (YecO) species: Haemophilus influenzae [TaxId: 727]
Probab=99.07 E-value=4.5e-10 Score=99.98 Aligned_cols=163 Identities=20% Similarity=0.256 Sum_probs=97.3
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHH---hhcCCccccc-eeecc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTL---FKSLPHARKY-FAAGL 137 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~l---f~~l~~~~~~-f~~gv 137 (367)
...+|+|+|||+|..|..+.+.. ..| ..+|+--|+...--..- .+.......+ +..+
T Consensus 39 ~~~~vLDlGCGtG~~~~~l~~~~---------------~~~---~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~- 99 (225)
T d1im8a_ 39 ADSNVYDLGCSRGAATLSARRNI---------------NQP---NVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCN- 99 (225)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTC---------------CCS---SCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECS-
T ss_pred CCCEEEEeccchhhHHHHHHHhh---------------cCC---CCceEEeCCCHHHHHHHHHHhHhhcccchhhhccc-
Confidence 34689999999999998876322 134 56788888865332221 1111111111 2222
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
.+. -+|....|+++|++++||++. .|..++|+.-.+-|+|
T Consensus 100 --d~~--~~~~~~~d~i~~~~~l~~~~~------------------------------------~d~~~~l~~i~~~Lkp 139 (225)
T d1im8a_ 100 --DIR--HVEIKNASMVILNFTLQFLPP------------------------------------EDRIALLTKIYEGLNP 139 (225)
T ss_dssp --CTT--TCCCCSEEEEEEESCGGGSCG------------------------------------GGHHHHHHHHHHHEEE
T ss_pred --hhh--ccccccceeeEEeeeccccCh------------------------------------hhHHHHHHHHHHhCCC
Confidence 222 236678899999999999752 2677899999999999
Q ss_pred CceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhh----hccCCCcccCCHHHHHHHHHhCCceEEe
Q 017702 218 GGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKV----DSFNLPTYNATPKELEAIIRTNGNFTIE 293 (367)
Q Consensus 218 GG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~----d~f~~P~y~~s~eE~~~~l~~~g~F~I~ 293 (367)
||.|++.-.. .++... .-..+...+..+....-.++.+. .....-.+..+.+|+.+++++.| |+-.
T Consensus 140 gG~li~~~~~-~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~L~~aG-F~~v 209 (225)
T d1im8a_ 140 NGVLVLSEKF-RFEDTK--------INHLLIDLHHQFKRANGYSELEVSQKRTALENVMRTDSIETHKVRLKNVG-FSQV 209 (225)
T ss_dssp EEEEEEEEEC-CCSSHH--------HHHHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCCCHHHHHHHHHHHT-CSEE
T ss_pred Cceeeccccc-ccccch--------hhhHHHHHHHHHHHHcCCCHHHHHHHHHHhhcccCCCCHHHHHHHHHHcC-CCce
Confidence 9999998665 433210 11222233333322222222222 11112234569999999999997 8643
|
| >d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA2 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.07 E-value=2e-08 Score=93.46 Aligned_cols=160 Identities=15% Similarity=0.198 Sum_probs=95.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccch---HHHhhcCCcc-ccceeecc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDF---NTLFKSLPHA-RKYFAAGL 137 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDF---n~lf~~l~~~-~~~f~~gv 137 (367)
.--+|+|+|||.|..++.+++.. + .+|.--|+..+.. +...+..... +..+..+.
T Consensus 61 ~G~~VLDiGCG~G~~~~~~a~~~-----------------g----~~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~~d 119 (291)
T d1kpia_ 61 PGMTLLDIGCGWGSTMRHAVAEY-----------------D----VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQG 119 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH-----------------C----CEEEEEESCHHHHHHHHHHHHHSCCSSCEEEEECC
T ss_pred CCCEEEEecCcchHHHHHHHHhc-----------------C----cceeeccchHHHHHHHHHHHHhhccchhhhhhhhc
Confidence 45799999999999888776322 1 1344444443221 1122222111 11222222
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
| -++++++|.|+|--++..+.+..... ..+.|..||+..++-|||
T Consensus 120 ----~--~~~~~~fD~i~sie~~eH~~~~~~~~-----------------------------~~~~~~~~f~~i~~~Lkp 164 (291)
T d1kpia_ 120 ----W--EEFDEPVDRIVSLGAFEHFADGAGDA-----------------------------GFERYDTFFKKFYNLTPD 164 (291)
T ss_dssp ----G--GGCCCCCSEEEEESCGGGTTCCSSCC-----------------------------STTHHHHHHHHHHHTSCT
T ss_pred ----c--cccccccceEeechhHHhcchhhhhh-----------------------------HHHHHHHHHHHHHHhCCC
Confidence 1 25678999999999986644322110 124677899999999999
Q ss_pred CceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCH-------hhhhccCCCc-ccCCHHHHHHHHHhCCc
Q 017702 218 GGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSE-------EKVDSFNLPT-YNATPKELEAIIRTNGN 289 (367)
Q Consensus 218 GG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~-------~~~d~f~~P~-y~~s~eE~~~~l~~~g~ 289 (367)
||+|++...+ .++... ..+ .+..+. +-+..+.+|- +.||..++...+++.|
T Consensus 165 gG~~~l~~i~-~~~~~~--------~~~-----------~~~~~p~~~~~~~~fi~kyiFpgg~lps~~~~~~~~e~~g- 223 (291)
T d1kpia_ 165 DGRMLLHTIT-IPDKEE--------AQE-----------LGLTSPMSLLRFIKFILTEIFPGGRLPRISQVDYYSSNAG- 223 (291)
T ss_dssp TCEEEEEEEE-CCCHHH--------HHH-----------HTCCCCHHHHHHHHHHHHHTCTTCCCCCHHHHHHHHHHHT-
T ss_pred CCceEEEEEe-ccCcch--------hhh-----------ccCCCchhhcccchHHHHHhcCCCCCCCHHHHHhhhcccc-
Confidence 9999999998 554210 000 011100 0012223443 6799999999999886
Q ss_pred eEEeEEEEE
Q 017702 290 FTIEKMEKL 298 (367)
Q Consensus 290 F~I~~lE~~ 298 (367)
|+|+..+.+
T Consensus 224 l~v~~~~~~ 232 (291)
T d1kpia_ 224 WKVERYHRI 232 (291)
T ss_dssp CEEEEEEEC
T ss_pred cccceeeec
Confidence 999998777
|
| >d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical protein PH0226 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.06 E-value=8.6e-11 Score=103.45 Aligned_cols=103 Identities=17% Similarity=0.251 Sum_probs=70.4
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC-Cc--cccceeeccCc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL-PH--ARKYFAAGLPG 139 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l-~~--~~~~f~~gvp~ 139 (367)
..+|+|+|||+|..|..+.+. -.+|+-.|+..+.. ...+.. .. ...-++.+.
T Consensus 38 ~~~ILDiGcG~G~~~~~la~~----------------------~~~v~giD~S~~~i-~~ak~~~~~~~~~~~~~~~d-- 92 (226)
T d1ve3a1 38 RGKVLDLACGVGGFSFLLEDY----------------------GFEVVGVDISEDMI-RKAREYAKSRESNVEFIVGD-- 92 (226)
T ss_dssp CCEEEEETCTTSHHHHHHHHT----------------------TCEEEEEESCHHHH-HHHHHHHHHTTCCCEEEECC--
T ss_pred CCEEEEECCCcchhhhhHhhh----------------------hcccccccccccch-hhhhhhhccccccccccccc--
Confidence 469999999999999866410 12567778754332 222221 11 112233333
Q ss_pred cccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 140 SFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
..+--+|++++|+|+|+.++||++. .|+..+|+.-++-|||||
T Consensus 93 -~~~l~~~~~~fD~I~~~~~l~~~~~------------------------------------~d~~~~l~~i~~~LkpgG 135 (226)
T d1ve3a1 93 -ARKLSFEDKTFDYVIFIDSIVHFEP------------------------------------LELNQVFKEVRRVLKPSG 135 (226)
T ss_dssp -TTSCCSCTTCEEEEEEESCGGGCCH------------------------------------HHHHHHHHHHHHHEEEEE
T ss_pred -cccccccCcCceEEEEecchhhCCh------------------------------------hHHHHHHHHHHHHcCcCc
Confidence 3334478899999999999999641 377789999999999999
Q ss_pred eEEEEeec
Q 017702 220 LMVLILAA 227 (367)
Q Consensus 220 ~lvl~~~g 227 (367)
+|++.+..
T Consensus 136 ~lii~~~~ 143 (226)
T d1ve3a1 136 KFIMYFTD 143 (226)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEcC
Confidence 99998764
|
| >d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical Protein YjhP domain: Hypothetical Protein YjhP species: Escherichia coli [TaxId: 562]
Probab=99.04 E-value=5.9e-10 Score=100.48 Aligned_cols=146 Identities=15% Similarity=0.030 Sum_probs=93.1
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhc----CCc-cccceeecc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKS----LPH-ARKYFAAGL 137 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~----l~~-~~~~f~~gv 137 (367)
.-+|+|+|||+|..+..+.+.. + .+|+--|+...-. .+.+. ... .+--|..+.
T Consensus 34 g~~VLDiGCG~G~~~~~la~~~-----------------~----~~v~GvD~s~~~~-~~ar~~~~~~gl~~~v~~~~~d 91 (245)
T d1nkva_ 34 GTRILDLGSGSGEMLCTWARDH-----------------G----ITGTGIDMSSLFT-AQAKRRAEELGVSERVHFIHND 91 (245)
T ss_dssp TCEEEEETCTTCHHHHHHHHHT-----------------C----CEEEEEESCHHHH-HHHHHHHHHTTCTTTEEEEESC
T ss_pred CCEEEEEcCCCCHHHHHHHHhc-----------------C----CEEEEEecccchh-hHHHHHHHHhhccccchhhhhH
Confidence 4799999999998877654211 1 2566667754221 12222 111 122365555
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
...++|++++|+++|..++||+.+. ..+|+...+-|||
T Consensus 92 ----~~~~~~~~~fD~v~~~~~~~~~~d~--------------------------------------~~~l~~~~r~LkP 129 (245)
T d1nkva_ 92 ----AAGYVANEKCDVAACVGATWIAGGF--------------------------------------AGAEELLAQSLKP 129 (245)
T ss_dssp ----CTTCCCSSCEEEEEEESCGGGTSSS--------------------------------------HHHHHHHTTSEEE
T ss_pred ----HhhccccCceeEEEEEehhhccCCH--------------------------------------HHHHHHHHHHcCc
Confidence 3446789999999999999997643 3589999999999
Q ss_pred CceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEE
Q 017702 218 GGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEK 297 (367)
Q Consensus 218 GG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~ 297 (367)
||++++...+ ...... . +.+...+. ...+.-+.+..++.+.+++.| |++...+.
T Consensus 130 GG~l~i~~~~-~~~~~~-~--------~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~aG-~~~v~~~~ 183 (245)
T d1nkva_ 130 GGIMLIGEPY-WRQLPA-T--------EEIAQACG---------------VSSTSDFLTLPGLVGAFDDLG-YDVVEMVL 183 (245)
T ss_dssp EEEEEEEEEE-ETTCCS-S--------HHHHHTTT---------------CSCGGGSCCHHHHHHHHHTTT-BCCCEEEE
T ss_pred CcEEEEEecc-ccCCCC-h--------HHHHHHhc---------------cCCCcccCCHHHHHHHHHHcC-CEEEEEEe
Confidence 9999999887 433211 1 11111110 111223678899999999997 88876544
Q ss_pred E
Q 017702 298 L 298 (367)
Q Consensus 298 ~ 298 (367)
.
T Consensus 184 ~ 184 (245)
T d1nkva_ 184 A 184 (245)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA1 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.03 E-value=2.8e-08 Score=92.14 Aligned_cols=154 Identities=11% Similarity=0.159 Sum_probs=85.6
Q ss_pred CCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEEEEeec
Q 017702 148 RSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLILAA 227 (367)
Q Consensus 148 ~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g 227 (367)
++++|-++|..++..+.. +++..||+...+-|+|||++++...+
T Consensus 125 ~~~fD~i~si~~~eh~~~------------------------------------~~~~~~~~~~~r~LkpgG~~~l~~i~ 168 (285)
T d1kpga_ 125 DEPVDRIVSIGAFEHFGH------------------------------------ERYDAFFSLAHRLLPADGVMLLHTIT 168 (285)
T ss_dssp CCCCSEEEEESCGGGTCT------------------------------------TTHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred cccccceeeehhhhhcCc------------------------------------hhHHHHHHHHHhhcCCCCcEEEEEEe
Confidence 468999999888887542 25667999999999999999998887
Q ss_pred ccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCC-cccCCHHHHHHHHHhCCceEEeEEEEEecCCCCCC
Q 017702 228 VVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLP-TYNATPKELEAIIRTNGNFTIEKMEKLSQPRRRIT 306 (367)
Q Consensus 228 ~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P-~y~~s~eE~~~~l~~~g~F~I~~lE~~~~p~~~~~ 306 (367)
........+.....-++ ..... +-+....+| -..||.+++..+++++| |+|+..+.+.
T Consensus 169 -~~~~~~~~~~~~~~~~~-~~~~~-----------~fi~kyiFpgg~lPsl~~~~~~~e~ag-f~v~~~~~~~------- 227 (285)
T d1kpga_ 169 -GLHPKEIHERGLPMSFT-FARFL-----------KFIVTEIFPGGRLPSIPMVQECASANG-FTVTRVQSLQ------- 227 (285)
T ss_dssp -ECCHHHHTTTTCSCHHH-HHHHH-----------HHHHHHTSTTCCCCCHHHHHHHHHTTT-CEEEEEEECH-------
T ss_pred -ccCchhhccccCCcchh-hhchh-----------hHHHHHhccCCCCCChhhHHHHHHHhc-hhhcccccch-------
Confidence 33210000000000001 00000 011222233 35689999999999986 9998887763
Q ss_pred HHHHHHhHHhhhhhhhh------hccCHHHHHHHHHHHHHHHHhhhhHHHHhcCCeEEEEEEEEe
Q 017702 307 ANEYASGIRAGIDGLIK------KHFGDEFVDEIFNYFTTKVEENYSIIEEKIRNVSNLFISLKR 365 (367)
Q Consensus 307 ~~~v~~~iRa~~~~~l~------~~~~~~~~de~f~ry~~~~~~~~~~~~~~~~~~~~~~~~l~~ 365 (367)
..++..++.|...+-+ +..+ +++|.++..-+..--.-+ +.+.....-++|+|
T Consensus 228 -~hYarTl~~W~~~f~~~~~ei~~~~~----~~~~rrw~~Yl~~c~~~F--~~g~~~v~q~~~~k 285 (285)
T d1kpga_ 228 -PHYAKTLDLWSAALQANKGQAIALQS----EEVYERYMKYLTGCAEMF--RIGYIDVNQFTCQK 285 (285)
T ss_dssp -HHHHHHHHHHHHHHHHTHHHHHHHSC----HHHHHHHHHHHHHHHHHH--HTTSEEEEEEEEEC
T ss_pred -hhHHHHHHHHHHHHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHH--HCCCCeEEEEEEEC
Confidence 3344444444443332 2233 445555543332222222 23344455566665
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=98.96 E-value=8.8e-10 Score=94.38 Aligned_cols=143 Identities=10% Similarity=0.089 Sum_probs=91.4
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCcc-----------
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHA----------- 129 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~----------- 129 (367)
++.-||+|+|||+|.++..+.+. -++|+-.|+..+.-...-+.....
T Consensus 19 ~~~~rvLd~GCG~G~~a~~la~~----------------------G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~ 76 (201)
T d1pjza_ 19 VPGARVLVPLCGKSQDMSWLSGQ----------------------GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKV 76 (201)
T ss_dssp CTTCEEEETTTCCSHHHHHHHHH----------------------CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHc----------------------CCceEeecccHHHHHHHHHHhccccchhhhhhhhh
Confidence 45579999999999999988731 124555555543322222221110
Q ss_pred ----ccceeeccCcccccc-CCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhH
Q 017702 130 ----RKYFAAGLPGSFHSR-LFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDM 204 (367)
Q Consensus 130 ----~~~f~~gvp~SFy~~-l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~ 204 (367)
...|..+ ++..- ..+..++|+++|+.++|++.. .++
T Consensus 77 ~~~~~~~~~~~---d~~~l~~~~~~~~D~i~~~~~l~~l~~------------------------------------~~~ 117 (201)
T d1pjza_ 77 YAAPGIEIWCG---DFFALTARDIGHCAAFYDRAAMIALPA------------------------------------DMR 117 (201)
T ss_dssp EECSSSEEEEE---CCSSSTHHHHHSEEEEEEESCGGGSCH------------------------------------HHH
T ss_pred ccccccceecc---cccccccccccceeEEEEEeeeEecch------------------------------------hhh
Confidence 0112222 22221 124578999999999999652 256
Q ss_pred HHHHHHHHHhhccCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHH
Q 017702 205 ESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAII 284 (367)
Q Consensus 205 ~~fL~~Ra~EL~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l 284 (367)
..+++.-++-|||||++++.... ..... ..-|.|..+.+|+++++
T Consensus 118 ~~~~~~i~~~LkpgG~l~l~~~~-~~~~~----------------------------------~~~p~~~~~~~el~~l~ 162 (201)
T d1pjza_ 118 ERYVQHLEALMPQACSGLLITLE-YDQAL----------------------------------LEGPPFSVPQTWLHRVM 162 (201)
T ss_dssp HHHHHHHHHHSCSEEEEEEEEES-SCSSS----------------------------------SSSCCCCCCHHHHHHTS
T ss_pred HHHHHHHHHhcCCCcEEEEEEcc-ccccc----------------------------------CCCccccCCHHHHHHHh
Confidence 67899999999999999988876 33211 12366778899999987
Q ss_pred HhCCceEEeEEEEEecC
Q 017702 285 RTNGNFTIEKMEKLSQP 301 (367)
Q Consensus 285 ~~~g~F~I~~lE~~~~p 301 (367)
.. .|+|..++.....
T Consensus 163 ~~--~~~i~~~~~~~~~ 177 (201)
T d1pjza_ 163 SG--NWEVTKVGGQDTL 177 (201)
T ss_dssp CS--SEEEEEEEESSCT
T ss_pred CC--CcEEEEEEEeccc
Confidence 54 4998887765443
|
| >d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein ECA1738 species: Erwinia carotovora [TaxId: 554]
Probab=98.95 E-value=3.6e-08 Score=87.44 Aligned_cols=152 Identities=13% Similarity=0.112 Sum_probs=89.4
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCcccc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSFH 142 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SFy 142 (367)
.-+|+|+|||+|..+..+.+. -. +|+--|+.. +.-...+.....+--|..+. .
T Consensus 21 ~~~VLDiGcG~G~~~~~l~~~-----------------g~-----~v~giD~s~-~~i~~a~~~~~~~~~~~~~~----~ 73 (225)
T d2p7ia1 21 PGNLLELGSFKGDFTSRLQEH-----------------FN-----DITCVEASE-EAISHAQGRLKDGITYIHSR----F 73 (225)
T ss_dssp SSCEEEESCTTSHHHHHHTTT-----------------CS-----CEEEEESCH-HHHHHHHHHSCSCEEEEESC----G
T ss_pred CCcEEEEeCCCcHHHHHHHHc-----------------CC-----eEEEEeCcH-HHhhhhhccccccccccccc----c
Confidence 458999999999999876511 01 355666543 22222332212222344443 3
Q ss_pred ccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHH-HhhccCceE
Q 017702 143 SRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARA-EELVPGGLM 221 (367)
Q Consensus 143 ~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra-~EL~pGG~l 221 (367)
+.+.+++++|+|+|...|||+++. ..+|+.-. +-|+|||.+
T Consensus 74 ~~~~~~~~fD~I~~~~vleh~~d~--------------------------------------~~~l~~i~~~~Lk~gG~l 115 (225)
T d2p7ia1 74 EDAQLPRRYDNIVLTHVLEHIDDP--------------------------------------VALLKRINDDWLAEGGRL 115 (225)
T ss_dssp GGCCCSSCEEEEEEESCGGGCSSH--------------------------------------HHHHHHHHHTTEEEEEEE
T ss_pred cccccccccccccccceeEecCCH--------------------------------------HHHHHHHHHHhcCCCceE
Confidence 445567999999999999997532 24665554 669999999
Q ss_pred EEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhh----hhccCCCcccCCHHHHHHHHHhCCceEEeEEEE
Q 017702 222 VLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEK----VDSFNLPTYNATPKELEAIIRTNGNFTIEKMEK 297 (367)
Q Consensus 222 vl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~----~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~ 297 (367)
++.++. ... ++..+ . ...|.+.... .+...--....+.++++..+++.| |+|.+.+.
T Consensus 116 ~i~~pn-~~~-----------~~~~~-~-----~~~~~~~~~~~~~~~~~~~~h~~~~~~~~l~~~l~~~G-f~i~~~~~ 176 (225)
T d2p7ia1 116 FLVCPN-ANA-----------VSRQI-A-----VKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAG-LQVTYRSG 176 (225)
T ss_dssp EEEEEC-TTC-----------HHHHH-H-----HHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTT-CEEEEEEE
T ss_pred EEEeCC-ccc-----------HHHHH-H-----HHhhhhhhhhhcCccccceeeeeccCHHHHHHHHHHCC-CEEEEEEE
Confidence 999875 221 11111 0 1112221110 011111123458999999999997 99998876
Q ss_pred E
Q 017702 298 L 298 (367)
Q Consensus 298 ~ 298 (367)
+
T Consensus 177 ~ 177 (225)
T d2p7ia1 177 I 177 (225)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Aclacinomycin-10-hydroxylase RdmB species: Streptomyces purpurascens [TaxId: 1924]
Probab=98.94 E-value=3.6e-09 Score=96.52 Aligned_cols=157 Identities=19% Similarity=0.210 Sum_probs=94.3
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccc--hHHHhhcCCccccceeeccC
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDND--FNTLFKSLPHARKYFAAGLP 138 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~ND--Fn~lf~~l~~~~~~f~~gvp 138 (367)
++.-+|+|+|||+|..+..+.+. .| .++++.-|+|..- ....+........ +.-++
T Consensus 80 ~~~~~vlDvG~G~G~~~~~l~~~-----------------~P---~~~~~~~Dlp~~~~~a~~~~~~~~~~~r--i~~~~ 137 (256)
T d1qzza2 80 SAVRHVLDVGGGNGGMLAAIALR-----------------AP---HLRGTLVELAGPAERARRRFADAGLADR--VTVAE 137 (256)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHH-----------------CT---TCEEEEEECHHHHHHHHHHHHHTTCTTT--EEEEE
T ss_pred ccCCEEEEECCCCCHHHHHHHHh-----------------hc---CcEEEEecChHHHHHHHHHHhhcCCcce--eeeee
Confidence 44569999999999888877622 24 5678888998411 1111222221111 22345
Q ss_pred ccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccC
Q 017702 139 GSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPG 218 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 218 (367)
++|+.. .| .+.|++++.++||-+++ ++...+|+..++.|+||
T Consensus 138 ~d~~~~-~p-~~~D~v~~~~vLh~~~d------------------------------------~~~~~lL~~i~~~Lkpg 179 (256)
T d1qzza2 138 GDFFKP-LP-VTADVVLLSFVLLNWSD------------------------------------EDALTILRGCVRALEPG 179 (256)
T ss_dssp CCTTSC-CS-CCEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHEEEE
T ss_pred eecccc-cc-ccchhhhccccccccCc------------------------------------HHHHHHHHHHHhhcCCc
Confidence 567764 34 45899999999984321 24557899999999999
Q ss_pred ceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEEE
Q 017702 219 GLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEKL 298 (367)
Q Consensus 219 G~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~~ 298 (367)
|++++.-.- ..+... ....+..+.+ +.-|+..| -..+|.+||++++++.| |++.+....
T Consensus 180 G~llI~d~~-~~~~~~-----~~~~~~~~~d-~~ml~~~~-------------g~~rt~~e~~~ll~~AG-f~~~~~~~~ 238 (256)
T d1qzza2 180 GRLLVLDRA-DVEGDG-----ADRFFSTLLD-LRMLTFMG-------------GRVRTRDEVVDLAGSAG-LALASERTS 238 (256)
T ss_dssp EEEEEEECC-H------------HHHHHHHH-HHHHHHHS-------------CCCCCHHHHHHHHHTTT-EEEEEEEEE
T ss_pred ceeEEEEec-cCCCCc-----ccHHHHHHHH-HHHHhhCC-------------CccCCHHHHHHHHHHCC-CceeEEEEe
Confidence 999876542 222110 1111121111 11122211 12579999999999997 999887655
|
| >d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.93 E-value=1.1e-08 Score=91.19 Aligned_cols=146 Identities=12% Similarity=0.061 Sum_probs=94.6
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc------------
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH------------ 128 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~------------ 128 (367)
+...||+|+|||+|.++..+.+. -++|+--|+...--...++..+.
T Consensus 44 ~~~~rvLd~GCG~G~~a~~LA~~----------------------G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~ 101 (229)
T d2bzga1 44 KSGLRVFFPLCGKAVEMKWFADR----------------------GHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPG 101 (229)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHT----------------------TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTT
T ss_pred CCCCEEEEeCCCCcHHHHHHHhC----------------------CCcEEEEeCCHHHHHHHHHHhhccccccchhcccc
Confidence 34579999999999999988741 12455555554222222222111
Q ss_pred cccceeeccCc-----ccccc-CCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHh
Q 017702 129 ARKYFAAGLPG-----SFHSR-LFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKN 202 (367)
Q Consensus 129 ~~~~f~~gvp~-----SFy~~-l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~ 202 (367)
.......++.- +++.. ..+.+++|++++..++|.+. | .
T Consensus 102 ~~~~~~~~~~v~~~~~d~~~l~~~~~~~fd~i~~~~~l~~~~--~----------------------------------~ 145 (229)
T d2bzga1 102 TKVFKSSSGNISLYCCSIFDLPRTNIGKFDMIWDRGALVAIN--P----------------------------------G 145 (229)
T ss_dssp CEEEEETTSSEEEEESCGGGGGGSCCCCEEEEEESSSTTTSC--G----------------------------------G
T ss_pred cceeeecCCcEEEEEcchhhccccccCceeEEEEEEEEEecc--c----------------------------------h
Confidence 00111111111 22322 35678999999999999964 2 1
Q ss_pred hHHHHHHHHHHhhccCceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHH
Q 017702 203 DMESFLNARAEELVPGGLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEA 282 (367)
Q Consensus 203 D~~~fL~~Ra~EL~pGG~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~ 282 (367)
+...+++.-++-|+|||++++.++. .+... ..-|.|+.+.+|++.
T Consensus 146 ~r~~~~~~~~~~LkpgG~~~l~~~~-~~~~~----------------------------------~~gpp~~~~~~el~~ 190 (229)
T d2bzga1 146 DRKCYADTMFSLLGKKFQYLLCVLS-YDPTK----------------------------------HPGPPFYVPHAEIER 190 (229)
T ss_dssp GHHHHHHHHHHTEEEEEEEEEEEEE-CCTTT----------------------------------CCCSSCCCCHHHHHH
T ss_pred hhHHHHHHHHhhcCCcceEEEEEcc-cCCCC----------------------------------CCCCCCCCCHHHHHH
Confidence 4556888889999999999999987 43211 123667889999999
Q ss_pred HHHhCCceEEeEEEEEecC
Q 017702 283 IIRTNGNFTIEKMEKLSQP 301 (367)
Q Consensus 283 ~l~~~g~F~I~~lE~~~~p 301 (367)
++.. .|+|+.+|..+..
T Consensus 191 lf~~--~~~i~~le~~~~~ 207 (229)
T d2bzga1 191 LFGK--ICNIRCLEKVDAF 207 (229)
T ss_dssp HHTT--TEEEEEEEEEECC
T ss_pred HhcC--CCEEEEEEEeccc
Confidence 9965 4999999887654
|
| >d1fp1d2 c.66.1.12 (D:129-372) Chalcone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Chalcone O-methyltransferase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=98.79 E-value=7.3e-08 Score=87.25 Aligned_cols=149 Identities=16% Similarity=0.156 Sum_probs=95.3
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC-ccccceeeccCc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP-HARKYFAAGLPG 139 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~-~~~~~f~~gvp~ 139 (367)
++..+|+|+|||+|..++.+++. .| +++++.-|||. ...... ..+ +..++|
T Consensus 80 ~~~~~vlDiGGG~G~~~~~l~~~-----------------~P---~l~~~v~Dlp~-----vi~~~~~~~r---i~~~~g 131 (244)
T d1fp1d2 80 EGISTLVDVGGGSGRNLELIISK-----------------YP---LIKGINFDLPQ-----VIENAPPLSG---IEHVGG 131 (244)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHH-----------------CT---TCEEEEEECHH-----HHTTCCCCTT---EEEEEC
T ss_pred cCCcEEEEecCCCcHHHHHHHHH-----------------CC---CCeEEEecchh-----hhhccCCCCC---eEEecC
Confidence 45689999999999988877622 35 67888889984 222221 222 334677
Q ss_pred cccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 140 SFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
+|++. .|. -|+++....||..++ ++-.++|+..++.|+|||
T Consensus 132 d~~~~-~p~--~D~~~l~~vLh~~~d------------------------------------e~~~~iL~~~~~aL~pgg 172 (244)
T d1fp1d2 132 DMFAS-VPQ--GDAMILKAVCHNWSD------------------------------------EKCIEFLSNCHKALSPNG 172 (244)
T ss_dssp CTTTC-CCC--EEEEEEESSGGGSCH------------------------------------HHHHHHHHHHHHHEEEEE
T ss_pred Ccccc-ccc--ceEEEEehhhhhCCH------------------------------------HHHHHHHHHHHHHcCCCc
Confidence 88875 353 399999999996432 244468999999999999
Q ss_pred eEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHH-HcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEE
Q 017702 220 LMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLA-KMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKME 296 (367)
Q Consensus 220 ~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~-~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE 296 (367)
++++.=.. .++.... .....+...-+. .-|+ ..|. .||.+||++++++.| |+..++.
T Consensus 173 ~llI~e~v-~~~~~~~---~~~~~~~~~~d~-~m~~~~~g~--------------ert~~e~~~ll~~AG-F~~v~v~ 230 (244)
T d1fp1d2 173 KVIIVEFI-LPEEPNT---SEESKLVSTLDN-LMFITVGGR--------------ERTEKQYEKLSKLSG-FSKFQVA 230 (244)
T ss_dssp EEEEEEEE-ECSSCCS---SHHHHHHHHHHH-HHHHHHSCC--------------CEEHHHHHHHHHHTT-CSEEEEE
T ss_pred EEEEEEEE-ecCCCCC---chHHHHHHHHHH-HHHhhCCCc--------------CCCHHHHHHHHHHcC-CCceEEE
Confidence 98887765 3332110 111001111111 1122 2231 578999999999997 9887664
|
| >d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TehB-like domain: Putative methyltransferase TehB species: Salmonella typhimurium [TaxId: 90371]
Probab=98.76 E-value=2e-08 Score=87.27 Aligned_cols=103 Identities=18% Similarity=0.260 Sum_probs=69.0
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC---ccccceeeccCc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP---HARKYFAAGLPG 139 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~---~~~~~f~~gvp~ 139 (367)
+-+|+|+|||+|.+++.+.+. -.+|+--|+..+-...+=+... -..-.+..+.
T Consensus 31 ~grvLDiGcG~G~~~~~la~~----------------------g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d-- 86 (198)
T d2i6ga1 31 PGRTLDLGCGNGRNSLYLAAN----------------------GYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVD-- 86 (198)
T ss_dssp SCEEEEETCTTSHHHHHHHHT----------------------TCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECC--
T ss_pred CCcEEEECCCCCHHHHHHHHH----------------------hhhhccccCcHHHHHHHHHHhhhccccchhhhhee--
Confidence 459999999999999977621 1245666665433322211111 1111122232
Q ss_pred cccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 140 SFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
...+.|++++|+|+|..++|++.. .++..+|+.-++-|+|||
T Consensus 87 --~~~~~~~~~fD~I~~~~~~~~~~~------------------------------------~~~~~~l~~~~~~L~pgG 128 (198)
T d2i6ga1 87 --LNTLTFDGEYDFILSTVVMMFLEA------------------------------------QTIPGLIANMQRCTKPGG 128 (198)
T ss_dssp --TTTCCCCCCEEEEEEESCGGGSCT------------------------------------THHHHHHHHHHHTEEEEE
T ss_pred --cccccccccccEEEEeeeeecCCH------------------------------------HHHHHHHHHHHHHcCCCc
Confidence 345567899999999999999642 156679999999999999
Q ss_pred eEEEEeec
Q 017702 220 LMVLILAA 227 (367)
Q Consensus 220 ~lvl~~~g 227 (367)
++++..+.
T Consensus 129 ~~~~~~~~ 136 (198)
T d2i6ga1 129 YNLIVAAM 136 (198)
T ss_dssp EEEEEEEB
T ss_pred EEEEEEec
Confidence 99998876
|
| >d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Putative methyltransferase CAC2371 species: Clostridium acetobutylicum [TaxId: 1488]
Probab=98.74 E-value=1.3e-08 Score=91.17 Aligned_cols=106 Identities=15% Similarity=0.200 Sum_probs=68.5
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC--ccccceeeccC
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP--HARKYFAAGLP 138 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~--~~~~~f~~gvp 138 (367)
.++-+|+|+|||+|..|..+.+. -.+++--|+..+--...-+..+ ..+--|..+.
T Consensus 36 ~~~~~vLDiGCG~G~~~~~l~~~----------------------g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d- 92 (246)
T d1y8ca_ 36 LVFDDYLDLACGTGNLTENLCPK----------------------FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQD- 92 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHGGG----------------------SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCC-
T ss_pred CCCCeEEEEeCcCCHHHHHHHHh----------------------CCccEeeccchhhhhhccccccccCccceeeccc-
Confidence 34578999999999999877521 1246666776533222111111 1112244443
Q ss_pred ccccccCCCCCceeEEEec-cccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 139 GSFHSRLFPRSSIHFVHTS-YALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~-~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
+ ..+-+++++|+|+|. .+++|+... +|+.++|+..++-|+|
T Consensus 93 --~-~~~~~~~~fD~i~~~~~~~~~~~~~-----------------------------------~~~~~~l~~~~~~Lkp 134 (246)
T d1y8ca_ 93 --I-SNLNINRKFDLITCCLDSTNYIIDS-----------------------------------DDLKKYFKAVSNHLKE 134 (246)
T ss_dssp --G-GGCCCSCCEEEEEECTTGGGGCCSH-----------------------------------HHHHHHHHHHHTTEEE
T ss_pred --h-hhhcccccccccceeeeeeeccCCH-----------------------------------HHHHHHHHHHHHhCCC
Confidence 2 223356799999986 678886532 3788899999999999
Q ss_pred CceEEEEeec
Q 017702 218 GGLMVLILAA 227 (367)
Q Consensus 218 GG~lvl~~~g 227 (367)
||+|++.+..
T Consensus 135 gG~~i~~~~~ 144 (246)
T d1y8ca_ 135 GGVFIFDINS 144 (246)
T ss_dssp EEEEEEEEEC
T ss_pred CeEEEEEeCC
Confidence 9999987754
|
| >d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical methyltransferase PH1305 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.74 E-value=2.5e-08 Score=89.11 Aligned_cols=105 Identities=17% Similarity=0.272 Sum_probs=69.4
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc--cccceeeccC
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH--ARKYFAAGLP 138 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~--~~~~f~~gvp 138 (367)
.+.-+|+|+|||+|..|+.+.+. -.+|+-.|+..+--...=+..+. .+-.|..+.
T Consensus 40 ~~~~~iLDiGcGtG~~~~~l~~~----------------------~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d- 96 (251)
T d1wzna1 40 REVRRVLDLACGTGIPTLELAER----------------------GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGD- 96 (251)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHT----------------------TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESC-
T ss_pred CCCCEEEEeCCCCCccchhhccc----------------------ceEEEEEeeccccccccccccccccccchheehh-
Confidence 34569999999999998876521 12466667764332221111111 122344444
Q ss_pred ccccccCCCCCceeEEEec-cccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 139 GSFHSRLFPRSSIHFVHTS-YALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~-~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
.+.+-+++++|+|+|. .++||++. .|+..+|+..++-|+|
T Consensus 97 ---~~~l~~~~~fD~I~~~~~~~~~~~~------------------------------------~~~~~~L~~~~~~Lkp 137 (251)
T d1wzna1 97 ---VLEIAFKNEFDAVTMFFSTIMYFDE------------------------------------EDLRKLFSKVAEALKP 137 (251)
T ss_dssp ---GGGCCCCSCEEEEEECSSGGGGSCH------------------------------------HHHHHHHHHHHHHEEE
T ss_pred ---hhhcccccccchHhhhhhhhhcCCh------------------------------------HHHHHHHHHHHHHcCC
Confidence 3455566899999996 67888641 2677899999999999
Q ss_pred CceEEEEeec
Q 017702 218 GGLMVLILAA 227 (367)
Q Consensus 218 GG~lvl~~~g 227 (367)
||++++.+..
T Consensus 138 gG~lii~~~~ 147 (251)
T d1wzna1 138 GGVFITDFPC 147 (251)
T ss_dssp EEEEEEEEEC
T ss_pred CcEEEEEecc
Confidence 9999997754
|
| >d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical methyltransferase TM1389 species: Thermotoga maritima [TaxId: 2336]
Probab=98.71 E-value=2.2e-08 Score=88.67 Aligned_cols=100 Identities=21% Similarity=0.344 Sum_probs=66.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCccc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGSF 141 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~SF 141 (367)
+..+|+|+|||+|..+..+.+. -.+|+-.|+...-- ...+.- ....+..+ +.
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~----------------------~~~v~giD~s~~~l-~~a~~~--~~~~~~~~---~~ 93 (246)
T d2avna1 42 NPCRVLDLGGGTGKWSLFLQER----------------------GFEVVLVDPSKEML-EVAREK--GVKNVVEA---KA 93 (246)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT----------------------TCEEEEEESCHHHH-HHHHHH--TCSCEEEC---CT
T ss_pred CCCEEEEECCCCchhccccccc----------------------ceEEEEeecccccc-cccccc--cccccccc---cc
Confidence 4569999999999999877511 12566767764221 111111 11223332 33
Q ss_pred cccCCCCCceeEEEec-cccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCce
Q 017702 142 HSRLFPRSSIHFVHTS-YALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGL 220 (367)
Q Consensus 142 y~~l~P~~svd~~~S~-~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~ 220 (367)
.+--+|++++|+|+|. .++||+. |...+|+.-.+-|||||+
T Consensus 94 ~~l~~~~~~fD~ii~~~~~~~~~~--------------------------------------d~~~~l~~i~r~Lk~gG~ 135 (246)
T d2avna1 94 EDLPFPSGAFEAVLALGDVLSYVE--------------------------------------NKDKAFSEIRRVLVPDGL 135 (246)
T ss_dssp TSCCSCTTCEEEEEECSSHHHHCS--------------------------------------CHHHHHHHHHHHEEEEEE
T ss_pred cccccccccccceeeecchhhhhh--------------------------------------hHHHHHHHHHhhcCcCcE
Confidence 4444789999999985 5789964 334588888899999999
Q ss_pred EEEEeec
Q 017702 221 MVLILAA 227 (367)
Q Consensus 221 lvl~~~g 227 (367)
+++.+..
T Consensus 136 ~ii~~~~ 142 (246)
T d2avna1 136 LIATVDN 142 (246)
T ss_dssp EEEEEEB
T ss_pred EEEEECC
Confidence 9998864
|
| >d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: mRNA cap (Guanine N-7) methyltransferase domain: mRNA cap (Guanine N-7) methyltransferase species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]
Probab=98.66 E-value=1.4e-07 Score=84.91 Aligned_cols=109 Identities=16% Similarity=0.312 Sum_probs=70.6
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHh---hcCCcc-ccceeecc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLF---KSLPHA-RKYFAAGL 137 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf---~~l~~~-~~~f~~gv 137 (367)
+.-+|+|+|||+|..+..+.+. .. . +|+--|+...--...- +..... +-.|..+.
T Consensus 24 ~~~~VLDlGCG~G~~~~~~~~~-----------------~~---~-~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D 82 (252)
T d1ri5a_ 24 RGDSVLDLGCGKGGDLLKYERA-----------------GI---G-EYYGVDIAEVSINDARVRARNMKRRFKVFFRAQD 82 (252)
T ss_dssp TTCEEEEETCTTTTTHHHHHHH-----------------TC---S-EEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESC
T ss_pred CcCEEEEecccCcHHHHHHHHc-----------------CC---C-eEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcc
Confidence 3478999999999987766421 11 1 4666676654322221 112111 12243433
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
.+-..+.+.+++|+|+|..++||+-.. .+|+..+|+..++-|+|
T Consensus 83 --~~~~~~~~~~~fD~V~~~~~l~~~~~~----------------------------------~~~~~~~l~~i~~~Lk~ 126 (252)
T d1ri5a_ 83 --SYGRHMDLGKEFDVISSQFSFHYAFST----------------------------------SESLDIAQRNIARHLRP 126 (252)
T ss_dssp --TTTSCCCCSSCEEEEEEESCGGGGGSS----------------------------------HHHHHHHHHHHHHTEEE
T ss_pred --hhhhcccccccceEEEEcceeeecCCC----------------------------------HHHHHHHHHHHhceeCC
Confidence 112233467899999999999996532 24788899999999999
Q ss_pred CceEEEEeec
Q 017702 218 GGLMVLILAA 227 (367)
Q Consensus 218 GG~lvl~~~g 227 (367)
||+|+++++.
T Consensus 127 gG~~i~~~~~ 136 (252)
T d1ri5a_ 127 GGYFIMTVPS 136 (252)
T ss_dssp EEEEEEEEEC
T ss_pred CCEEEEEecC
Confidence 9999998864
|
| >d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: BC2162-like domain: Methyltransferase BC2162 species: Bacillus cereus [TaxId: 1396]
Probab=98.63 E-value=2.6e-08 Score=91.66 Aligned_cols=105 Identities=19% Similarity=0.242 Sum_probs=69.0
Q ss_pred CCCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchH---HHhhcCCccccceeec
Q 017702 60 TLKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFN---TLFKSLPHARKYFAAG 136 (367)
Q Consensus 60 ~~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn---~lf~~l~~~~~~f~~g 136 (367)
..++.+|+|+|||+|..+..+.+.+ ++ .-+|+--|+..+-.. ..+...+. +.-|..+
T Consensus 25 ~~~~~~ILDiGcG~G~~~~~la~~~----------------~~---~~~v~giD~s~~~l~~a~~~~~~~~~-~~~f~~~ 84 (281)
T d2gh1a1 25 ITKPVHIVDYGCGYGYLGLVLMPLL----------------PE---GSKYTGIDSGETLLAEARELFRLLPY-DSEFLEG 84 (281)
T ss_dssp CCSCCEEEEETCTTTHHHHHHTTTS----------------CT---TCEEEEEECCHHHHHHHHHHHHSSSS-EEEEEES
T ss_pred cCCcCEEEEecCcCCHHHHHHHHhC----------------CC---CCEEEEEecchhHhhhhhcccccccc-ccccccc
Confidence 3567999999999999888765221 11 125666677543222 12222221 2234444
Q ss_pred cCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhc
Q 017702 137 LPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELV 216 (367)
Q Consensus 137 vp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~ 216 (367)
. + ..+-+++++|+|+|+.++||+++ ...+|+.-.+-||
T Consensus 85 d---~-~~~~~~~~fD~v~~~~~l~~~~d--------------------------------------~~~~l~~~~~~Lk 122 (281)
T d2gh1a1 85 D---A-TEIELNDKYDIAICHAFLLHMTT--------------------------------------PETMLQKMIHSVK 122 (281)
T ss_dssp C---T-TTCCCSSCEEEEEEESCGGGCSS--------------------------------------HHHHHHHHHHTEE
T ss_pred c---c-ccccccCCceEEEEehhhhcCCC--------------------------------------HHHHHHHHHHHcC
Confidence 3 3 33444678999999999999763 3358899999999
Q ss_pred cCceEEEEee
Q 017702 217 PGGLMVLILA 226 (367)
Q Consensus 217 pGG~lvl~~~ 226 (367)
|||++++.-+
T Consensus 123 pgG~lii~~~ 132 (281)
T d2gh1a1 123 KGGKIICFEP 132 (281)
T ss_dssp EEEEEEEEEC
T ss_pred cCcEEEEEEC
Confidence 9999998764
|
| >d1fp2a2 c.66.1.12 (A:109-352) Isoflavone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Isoflavone O-methyltransferase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=98.59 E-value=2.1e-07 Score=84.10 Aligned_cols=151 Identities=17% Similarity=0.217 Sum_probs=94.1
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCcc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGS 140 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~S 140 (367)
.+..+|+|+|||+|..++.+++ + .| +++++.-|||. .....+...+ +.-++|+
T Consensus 79 ~~~~~vvDvGGG~G~~~~~l~~--------~---------~P---~l~~~v~Dlp~-----vi~~~~~~~r--v~~~~gD 131 (244)
T d1fp2a2 79 DGLESIVDVGGGTGTTAKIICE--------T---------FP---KLKCIVFDRPQ-----VVENLSGSNN--LTYVGGD 131 (244)
T ss_dssp TTCSEEEEETCTTSHHHHHHHH--------H---------CT---TCEEEEEECHH-----HHTTCCCBTT--EEEEECC
T ss_pred cCceEEEEecCCccHHHHHHHH--------h---------CC---CCeEEEecCHH-----HHHhCcccCc--eEEEecC
Confidence 4567899999999999887762 2 35 67889999984 2333332222 3346677
Q ss_pred ccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccC--
Q 017702 141 FHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPG-- 218 (367)
Q Consensus 141 Fy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG-- 218 (367)
|++.. | ..|+++..+.||..++ ++-.++|+..++.|+||
T Consensus 132 ~f~~~-p--~aD~~~l~~vLHdw~d------------------------------------~~~~~iL~~~~~al~pgg~ 172 (244)
T d1fp2a2 132 MFTSI-P--NADAVLLKYILHNWTD------------------------------------KDCLRILKKCKEAVTNDGK 172 (244)
T ss_dssp TTTCC-C--CCSEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHHSGGGC
T ss_pred cccCC-C--CCcEEEEEeecccCCh------------------------------------HHHHHHHHHHHHHcCcccC
Confidence 88753 4 4699999999995332 24457999999999999
Q ss_pred -ceEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHHcCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEE
Q 017702 219 -GLMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAKMGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEK 297 (367)
Q Consensus 219 -G~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~ 297 (367)
|++++.-.- .++... .........+-+ +.-|+-.| -.||.+||++++++.| |++.++..
T Consensus 173 ~~~lli~e~~-~~~~~~---~~~~~~~~~~~d-l~m~~~~G--------------~ert~~e~~~ll~~AG-f~~~~i~~ 232 (244)
T d1fp2a2 173 RGKVTIIDMV-IDKKKD---ENQVTQIKLLMD-VNMACLNG--------------KERNEEEWKKLFIEAG-FQHYKISP 232 (244)
T ss_dssp CCEEEEEECE-ECTTTS---CHHHHHHHHHHH-HHGGGGTC--------------CCEEHHHHHHHHHHTT-CCEEEEEE
T ss_pred CcEEEEEEee-cCCCCC---CchHHHHHHHHH-HHHHhCCC--------------cCCCHHHHHHHHHHcC-CceEEEEE
Confidence 555554332 222111 000011111111 11112223 1679999999999997 99887654
|
| >d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: rRNA methyltransferase RlmA domain: rRNA methyltransferase RlmA species: Escherichia coli [TaxId: 562]
Probab=98.56 E-value=7.5e-08 Score=88.00 Aligned_cols=78 Identities=26% Similarity=0.300 Sum_probs=49.4
Q ss_pred CCCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCc
Q 017702 60 TLKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPG 139 (367)
Q Consensus 60 ~~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~ 139 (367)
..+..+|+|+|||+|..+..+.+.. | +.+++-.|+...--...-+..+ +-.|..|
T Consensus 82 ~~~~~~iLDiGcG~G~~~~~l~~~~-----------------~---~~~~~giD~s~~~~~~a~~~~~--~~~~~~~--- 136 (268)
T d1p91a_ 82 DDKATAVLDIGCGEGYYTHAFADAL-----------------P---EITTFGLDVSKVAIKAAAKRYP--QVTFCVA--- 136 (268)
T ss_dssp CTTCCEEEEETCTTSTTHHHHHHTC-----------------T---TSEEEEEESCHHHHHHHHHHCT--TSEEEEC---
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHHC-----------------C---CCEEEEecchHhhhhhhhcccc--cccceee---
Confidence 3456899999999999998776222 2 3466777775432221111121 2234443
Q ss_pred cccccCCCCCceeEEEecccccc
Q 017702 140 SFHSRLFPRSSIHFVHTSYALHW 162 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alhW 162 (367)
+...--++++++|++++..++|+
T Consensus 137 d~~~l~~~~~sfD~v~~~~~~~~ 159 (268)
T d1p91a_ 137 SSHRLPFSDTSMDAIIRIYAPCK 159 (268)
T ss_dssp CTTSCSBCTTCEEEEEEESCCCC
T ss_pred ehhhccCCCCCEEEEeecCCHHH
Confidence 34555678999999999877666
|
| >d1kyza2 c.66.1.12 (A:120-362) Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=98.48 E-value=1.9e-06 Score=77.43 Aligned_cols=150 Identities=19% Similarity=0.210 Sum_probs=89.9
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCccccceeeccCcc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHARKYFAAGLPGS 140 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~~~~f~~gvp~S 140 (367)
.+..+|+|+|||+|..++.+++. .| .++++.-|||.- ....... --+..+++.
T Consensus 80 ~~~~~vvDvGGG~G~~~~~l~~~-----------------~P---~l~~~v~Dlp~v-----i~~~~~~--~r~~~~~~d 132 (243)
T d1kyza2 80 EGLKSLVDVGGGTGAVINTIVSK-----------------YP---TIKGINFDLPHV-----IEDAPSY--PGVEHVGGD 132 (243)
T ss_dssp SSCSEEEEETCTTSHHHHHHHHH-----------------CT---TSEEEEEECTTT-----TTTCCCC--TTEEEEECC
T ss_pred cCCcEEEEecCCCcHHHHHHHHH-----------------CC---CCeEEEcccHHh-----hhhcccC--CceEEeccc
Confidence 44678999999999999988732 34 567888999952 1111111 124446677
Q ss_pred ccccCCCCCceeEEEeccccc-cccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 141 FHSRLFPRSSIHFVHTSYALH-WLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 141 Fy~~l~P~~svd~~~S~~alh-WLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
|++. .|.. |+.+..+.+| | | .+|...+|+..++.|+|||
T Consensus 133 ~~~~-~P~a--d~~~l~~vlh~~----~---------------------------------d~~~~~iL~~~~~al~pgg 172 (243)
T d1kyza2 133 MFVS-IPKA--DAVFMKWICHDW----S---------------------------------DEHCLKFLKNCYEALPDNG 172 (243)
T ss_dssp TTTC-CCCC--SCEECSSSSTTS----C---------------------------------HHHHHHHHHHHHHHCCSSS
T ss_pred cccc-CCCc--ceEEEEEEeecC----C---------------------------------HHHHHHHHHHHHHhcCCCc
Confidence 8775 4654 3344445555 4 1 1356679999999999999
Q ss_pred eEEEEeecccCCCCCCCCCchhhHHHHHHHHHHHHHH--cCCCCHhhhhccCCCcccCCHHHHHHHHHhCCceEEeEEEE
Q 017702 220 LMVLILAAVVPDGIPLSNSYVGVFNNILGSCFNDLAK--MGVLSEEKVDSFNLPTYNATPKELEAIIRTNGNFTIEKMEK 297 (367)
Q Consensus 220 ~lvl~~~g~~~n~~~~~~~~~~~~~~~l~~al~~m~~--eG~i~~~~~d~f~~P~y~~s~eE~~~~l~~~g~F~I~~lE~ 297 (367)
++++.-.- .++... ..........-+ +.-|+. .| ..||.+||++++++.| |+..++..
T Consensus 173 ~~li~d~~-~~~~~~---~~~~~~~~~~~d-~~ml~~~~~g--------------~ert~~e~~~ll~~AG-f~~vkv~~ 232 (243)
T d1kyza2 173 KVIVAECI-LPVAPD---SSLATKGVVHID-VIMLAHNPGG--------------KERTQKEFEDLAKGAG-FQGFKVHC 232 (243)
T ss_dssp CEEEEECE-ECSSCC---CCHHHHHHHHHH-HHHHHHCSSC--------------CCEEHHHHHHHHHHHC-CSCEEEEE
T ss_pred eEEEEEEE-ecCCCC---CchhhHHHHHHH-HHHHhhCCCC--------------CcCCHHHHHHHHHHcC-CCcEEEEE
Confidence 98876443 222110 011111111111 222322 22 1578999999999997 98887653
|
| >d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Arginine methyltransferase, HMT1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.30 E-value=9.4e-07 Score=82.75 Aligned_cols=99 Identities=22% Similarity=0.343 Sum_probs=64.2
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC----Ccc-ccceeecc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL----PHA-RKYFAAGL 137 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l----~~~-~~~f~~gv 137 (367)
.-+|+|+|||+|..|+.+++. -+ . +|+.-|... .-...+.. ... +-.++.+
T Consensus 39 ~~~VLDlGcGtG~ls~~aa~~-----------------Ga---~-~V~avd~s~--~~~~a~~~~~~~~~~~~i~~i~~- 94 (328)
T d1g6q1_ 39 DKIVLDVGCGTGILSMFAAKH-----------------GA---K-HVIGVDMSS--IIEMAKELVELNGFSDKITLLRG- 94 (328)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-----------------CC---S-EEEEEESST--HHHHHHHHHHHTTCTTTEEEEES-
T ss_pred cCEEEEeCCCCCHHHHHHHHh-----------------CC---C-EEEEEeCCH--HHHHHHHHHHHhCccccceEEEe-
Confidence 368999999999998866521 11 2 577777642 11222221 111 1223333
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
+..+--+|++++|+++|....+.+... .++..++.+|.+-|||
T Consensus 95 --~~~~l~~~~~~~D~i~se~~~~~~~~e-----------------------------------~~~~~~~~a~~r~Lkp 137 (328)
T d1g6q1_ 95 --KLEDVHLPFPKVDIIISEWMGYFLLYE-----------------------------------SMMDTVLYARDHYLVE 137 (328)
T ss_dssp --CTTTSCCSSSCEEEEEECCCBTTBSTT-----------------------------------CCHHHHHHHHHHHEEE
T ss_pred --ehhhccCcccceeEEEEEecceeeccc-----------------------------------hhHHHHHHHHHhccCC
Confidence 344555788999999998888775532 2566789999999999
Q ss_pred CceEE
Q 017702 218 GGLMV 222 (367)
Q Consensus 218 GG~lv 222 (367)
||+++
T Consensus 138 gG~ii 142 (328)
T d1g6q1_ 138 GGLIF 142 (328)
T ss_dssp EEEEE
T ss_pred CeEEE
Confidence 99985
|
| >d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TrmB-like domain: tRNA (guanine-N(7)-)-methyltransferase TrmB species: Bacillus subtilis [TaxId: 1423]
Probab=98.24 E-value=6.2e-07 Score=78.82 Aligned_cols=111 Identities=13% Similarity=0.131 Sum_probs=74.2
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC---CccccceeeccCcc
Q 017702 64 FKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL---PHARKYFAAGLPGS 140 (367)
Q Consensus 64 ~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l---~~~~~~f~~gvp~S 140 (367)
-.|+|+|||+|..++.+... .| +..++--|+..+-.....+.. .-.+-.|..|....
T Consensus 31 PlvLeIGcG~G~~~~~lA~~-----------------~p---~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~Da~~ 90 (204)
T d2fcaa1 31 PIHIEVGTGKGQFISGMAKQ-----------------NP---DINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADT 90 (204)
T ss_dssp CEEEEECCTTSHHHHHHHHH-----------------CT---TSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGG
T ss_pred ceEEEEEecCcHHHHHHHHh-----------------CC---CCcEEEeecchHHHHHHHHHHHHHhccCchhcccchhh
Confidence 36999999999999987621 34 567888888765544443332 12233455555443
Q ss_pred ccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCce
Q 017702 141 FHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGL 220 (367)
Q Consensus 141 Fy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~ 220 (367)
+. ..+|++++|.++..+...|..+... |.++. ...||+.-++-|||||.
T Consensus 91 l~-~~~~~~~~d~v~i~fp~P~~k~~h~-----------k~Rl~-------------------~~~~l~~~~r~LkpgG~ 139 (204)
T d2fcaa1 91 LT-DVFEPGEVKRVYLNFSDPWPKKRHE-----------KRRLT-------------------YSHFLKKYEEVMGKGGS 139 (204)
T ss_dssp HH-HHCCTTSCCEEEEESCCCCCSGGGG-----------GGSTT-------------------SHHHHHHHHHHHTTSCE
T ss_pred hh-cccCchhhhccccccccccchhhhc-----------chhhh-------------------HHHHHHHHHHhCCCCcE
Confidence 33 5689999999999999999543210 00110 12588999999999999
Q ss_pred EEEEe
Q 017702 221 MVLIL 225 (367)
Q Consensus 221 lvl~~ 225 (367)
|++.+
T Consensus 140 l~i~T 144 (204)
T d2fcaa1 140 IHFKT 144 (204)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 98865
|
| >d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein MJ0882 domain: Hypothetical protein MJ0882 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.22 E-value=3.5e-06 Score=72.61 Aligned_cols=104 Identities=13% Similarity=0.110 Sum_probs=63.6
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhc-----CCccccceee
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKS-----LPHARKYFAA 135 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~-----l~~~~~~f~~ 135 (367)
.+.-+|+|+|||+|..|+.+... -+ +|+..|+...-....=++ +...+-.+..
T Consensus 51 ~~~~~VLDiGcG~G~~~~~la~~-----------------~~-----~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~ 108 (194)
T d1dusa_ 51 DKDDDILDLGCGYGVIGIALADE-----------------VK-----STTMADINRRAIKLAKENIKLNNLDNYDIRVVH 108 (194)
T ss_dssp CTTCEEEEETCTTSHHHHHHGGG-----------------SS-----EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEE
T ss_pred CCCCeEEEEeecCChhHHHHHhh-----------------cc-----ccceeeeccccchhHHHHHHHhCCccceEEEEE
Confidence 34579999999999998766421 12 356667653222221111 1111112222
Q ss_pred ccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhh
Q 017702 136 GLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEEL 215 (367)
Q Consensus 136 gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL 215 (367)
+++++ -++++++|+|+|+..+|+.. ..+..+|+.-.+-|
T Consensus 109 ---~d~~~-~~~~~~fD~Ii~~~p~~~~~-------------------------------------~~~~~~l~~~~~~L 147 (194)
T d1dusa_ 109 ---SDLYE-NVKDRKYNKIITNPPIRAGK-------------------------------------EVLHRIIEEGKELL 147 (194)
T ss_dssp ---CSTTT-TCTTSCEEEEEECCCSTTCH-------------------------------------HHHHHHHHHHHHHE
T ss_pred ---cchhh-hhccCCceEEEEcccEEecc-------------------------------------hhhhhHHHHHHHhc
Confidence 33444 46789999999987776521 12346788888899
Q ss_pred ccCceEEEEeec
Q 017702 216 VPGGLMVLILAA 227 (367)
Q Consensus 216 ~pGG~lvl~~~g 227 (367)
+|||+|++....
T Consensus 148 kpgG~l~i~~~~ 159 (194)
T d1dusa_ 148 KDNGEIWVVIQT 159 (194)
T ss_dssp EEEEEEEEEEES
T ss_pred CcCcEEEEEEeC
Confidence 999999887643
|
| >d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Glycine N-methyltransferase domain: Glycine N-methyltransferase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.20 E-value=1.1e-06 Score=80.62 Aligned_cols=112 Identities=18% Similarity=0.201 Sum_probs=67.1
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc---ccc-ceeeccC
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH---ARK-YFAAGLP 138 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~---~~~-~f~~gvp 138 (367)
..+|+|+|||+|..|+.+.+. -.+|+--|+..+--+..-+.... ... .-.....
T Consensus 57 ~~~vLD~GcG~G~~~~~la~~----------------------g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~ 114 (292)
T d1xvaa_ 57 CHRVLDVACGTGVDSIMLVEE----------------------GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEE 114 (292)
T ss_dssp CCEEEESSCTTSHHHHHHHHT----------------------TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEE
T ss_pred CCEEEEecCCCcHHHHHHHHc----------------------CCeeeeccCchHHHHHHHHHHHhcccccccceeeeee
Confidence 468999999999999887621 12566667764322111111100 000 0000111
Q ss_pred cccc---ccCCCCCceeEEEec-cccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHh
Q 017702 139 GSFH---SRLFPRSSIHFVHTS-YALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEE 214 (367)
Q Consensus 139 ~SFy---~~l~P~~svd~~~S~-~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~E 214 (367)
..|. ..+.+..++|+++|. .+++++...-. + ..|...+|+..++-
T Consensus 115 ~~~~~~~~~~~~~~~fd~v~~~~~~~~~~~~~~~---~----------------------------~~~~~~~l~~~~~~ 163 (292)
T d1xvaa_ 115 ANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKG---D----------------------------QSEHRLALKNIASM 163 (292)
T ss_dssp CCGGGHHHHSCCTTCEEEEEECSSCGGGSCCTTS---S----------------------------SHHHHHHHHHHHHT
T ss_pred ccccccccccCCCCCceEEEEecCchhhcCCccc---C----------------------------hHHHHHHHHHHHHH
Confidence 2222 344567899999875 47888553211 0 13778899999999
Q ss_pred hccCceEEEEeec
Q 017702 215 LVPGGLMVLILAA 227 (367)
Q Consensus 215 L~pGG~lvl~~~g 227 (367)
|||||+|++.+..
T Consensus 164 LkpgG~li~~~~~ 176 (292)
T d1xvaa_ 164 VRPGGLLVIDHRN 176 (292)
T ss_dssp EEEEEEEEEEEEC
T ss_pred cCcCcEEEEeecC
Confidence 9999999998753
|
| >d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 1, PRMT1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.15 E-value=2.1e-06 Score=79.84 Aligned_cols=99 Identities=17% Similarity=0.203 Sum_probs=64.0
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC----ccccceeeccCc
Q 017702 64 FKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP----HARKYFAAGLPG 139 (367)
Q Consensus 64 ~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~----~~~~~f~~gvp~ 139 (367)
-+|+|+|||+|.+|+.+++. -+ . +|+--|...+ ....-+... ..+-.+..+
T Consensus 35 ~~VLDiGcG~G~ls~~aa~~-----------------Ga---~-~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~--- 89 (316)
T d1oria_ 35 KVVLDVGSGTGILCMFAAKA-----------------GA---R-KVIGIECSSI-SDYAVKIVKANKLDHVVTIIKG--- 89 (316)
T ss_dssp CEEEEETCTTSHHHHHHHHT-----------------TC---S-EEEEEECSTT-HHHHHHHHHHTTCTTTEEEEES---
T ss_pred CEEEEEecCCcHHHHHHHHh-----------------CC---C-EEEEEcCcHH-HhhhhhHHHHhCCccccceEec---
Confidence 57999999999988766521 12 2 5777776432 222111111 111223333
Q ss_pred cccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 140 SFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
+..+--+|.+++|+++|....|.+-.- .++..++.+|.+-|+|||
T Consensus 90 ~~~~~~~~~~~~D~ivs~~~~~~l~~e-----------------------------------~~~~~~l~~~~r~Lkp~G 134 (316)
T d1oria_ 90 KVEEVELPVEKVDIIISEWMGYCLFYE-----------------------------------SMLNTVLHARDKWLAPDG 134 (316)
T ss_dssp CTTTCCCSSSCEEEEEECCCBBTBTBT-----------------------------------CCHHHHHHHHHHHEEEEE
T ss_pred cHHHcccccceeEEEeeeeeeeeeccH-----------------------------------HHHHHHHHHHHhcCCCCe
Confidence 445555788999999998777775421 256679999999999999
Q ss_pred eEE
Q 017702 220 LMV 222 (367)
Q Consensus 220 ~lv 222 (367)
+++
T Consensus 135 ~ii 137 (316)
T d1oria_ 135 LIF 137 (316)
T ss_dssp EEE
T ss_pred EEE
Confidence 986
|
| >d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=98.14 E-value=1.3e-06 Score=77.06 Aligned_cols=79 Identities=11% Similarity=0.071 Sum_probs=47.9
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC---CccccceeeccC
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL---PHARKYFAAGLP 138 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l---~~~~~~f~~gvp 138 (367)
+.-+|+|+|||+|..|..+.+.+ .+ .-.|+-.|....-....-+.+ ...+..+..+
T Consensus 75 ~g~~VLdiG~GtG~~s~~la~~~----------------~~---~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~-- 133 (213)
T d1dl5a1 75 KGMRVLEIGGGTGYNAAVMSRVV----------------GE---KGLVVSVEYSRKICEIAKRNVERLGIENVIFVCG-- 133 (213)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH----------------CT---TCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES--
T ss_pred ccceEEEecCccchhHHHHHHHh----------------CC---CCcEEEeecchhhHHHhhhhHhhhcccccccccC--
Confidence 45799999999999999876433 11 224666665432222111111 1223334443
Q ss_pred ccccccCCCCCceeEEEecccccc
Q 017702 139 GSFHSRLFPRSSIHFVHTSYALHW 162 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~~alhW 162 (367)
+..+-+++.+++|.|++..++++
T Consensus 134 -d~~~~~~~~~~fD~I~~~~~~~~ 156 (213)
T d1dl5a1 134 -DGYYGVPEFSPYDVIFVTVGVDE 156 (213)
T ss_dssp -CGGGCCGGGCCEEEEEECSBBSC
T ss_pred -chHHccccccchhhhhhhccHHH
Confidence 34455566788999999999887
|
| >d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.09 E-value=1.1e-05 Score=71.80 Aligned_cols=107 Identities=13% Similarity=0.044 Sum_probs=64.6
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc-cccceeeccCc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH-ARKYFAAGLPG 139 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~-~~~~f~~gvp~ 139 (367)
.+..+|||+|||+|..+..+.+.. | .-.||--|...--...+-..... .+..++.+...
T Consensus 73 kpG~~VLDlGcGsG~~~~~la~~~-----------------~---~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~ 132 (230)
T d1g8sa_ 73 KRDSKILYLGASAGTTPSHVADIA-----------------D---KGIVYAIEYAPRIMRELLDACAERENIIPILGDAN 132 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHHHT-----------------T---TSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTT
T ss_pred CCCCEEEEeCEEcCHHHHHHHHhC-----------------C---CCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeec
Confidence 445899999999999998886422 1 12577777653221122111111 12234444433
Q ss_pred cccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 140 SFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
... ..++...|+.+++..+||.. +...++.....-|||||
T Consensus 133 ~~~--~~~~~~~~v~~i~~~~~~~~--------------------------------------~~~~~l~~~~r~LKpgG 172 (230)
T d1g8sa_ 133 KPQ--EYANIVEKVDVIYEDVAQPN--------------------------------------QAEILIKNAKWFLKKGG 172 (230)
T ss_dssp CGG--GGTTTCCCEEEEEECCCSTT--------------------------------------HHHHHHHHHHHHEEEEE
T ss_pred cCc--ccccccceeEEeeccccchH--------------------------------------HHHHHHHHHHHhcccCc
Confidence 322 23445667767766777632 33457888888999999
Q ss_pred eEEEEeec
Q 017702 220 LMVLILAA 227 (367)
Q Consensus 220 ~lvl~~~g 227 (367)
.+++....
T Consensus 173 ~~~i~~k~ 180 (230)
T d1g8sa_ 173 YGMIAIKA 180 (230)
T ss_dssp EEEEEEEG
T ss_pred eEEEEeec
Confidence 99998876
|
| >d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein Ta0852 species: Thermoplasma acidophilum [TaxId: 2303]
Probab=98.05 E-value=2.3e-06 Score=77.39 Aligned_cols=98 Identities=11% Similarity=0.149 Sum_probs=60.5
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhc-CCc----cccceeecc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKS-LPH----ARKYFAAGL 137 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~-l~~----~~~~f~~gv 137 (367)
-.+|+|+|||+|..|+.+...+ .| .-+|+--|... +|-...+. +.. .+--+..+.
T Consensus 86 G~rVLEiG~GsG~lt~~la~~v----------------~~---~g~V~~vD~~e-~~~~~A~~n~~~~~~~~nv~~~~~D 145 (250)
T d1yb2a1 86 GMDILEVGVGSGNMSSYILYAL----------------NG---KGTLTVVERDE-DNLKKAMDNLSEFYDIGNVRTSRSD 145 (250)
T ss_dssp TCEEEEECCTTSHHHHHHHHHH----------------TT---SSEEEEECSCH-HHHHHHHHHHHTTSCCTTEEEECSC
T ss_pred cCEEEEeeeeCcHHHHHHHHHh----------------CC---CcEEEEEECCH-HHHHHHHHHHHHhcCCCceEEEEee
Confidence 4799999999999999987554 12 22566666543 22222221 111 111233333
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
+. ..+|++++|.++.. +|.+- .+|..-++-|||
T Consensus 146 ---i~-~~~~~~~fD~V~ld--------~p~p~-----------------------------------~~l~~~~~~LKp 178 (250)
T d1yb2a1 146 ---IA-DFISDQMYDAVIAD--------IPDPW-----------------------------------NHVQKIASMMKP 178 (250)
T ss_dssp ---TT-TCCCSCCEEEEEEC--------CSCGG-----------------------------------GSHHHHHHTEEE
T ss_pred ---ee-cccccceeeeeeec--------CCchH-----------------------------------HHHHHHHHhcCC
Confidence 33 34678899999863 33210 267788899999
Q ss_pred CceEEEEeec
Q 017702 218 GGLMVLILAA 227 (367)
Q Consensus 218 GG~lvl~~~g 227 (367)
||+|++..+.
T Consensus 179 GG~lv~~~P~ 188 (250)
T d1yb2a1 179 GSVATFYLPN 188 (250)
T ss_dssp EEEEEEEESS
T ss_pred CceEEEEeCC
Confidence 9999887654
|
| >d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ribosomal protein L11 methyltransferase PrmA domain: PrmA-like protein TTHA0656 (TT0836) species: Thermus thermophilus [TaxId: 274]
Probab=98.04 E-value=8.2e-06 Score=73.84 Aligned_cols=97 Identities=19% Similarity=0.172 Sum_probs=56.8
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC--CccccceeeccCcc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL--PHARKYFAAGLPGS 140 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l--~~~~~~f~~gvp~S 140 (367)
.-+|+|+|||+|..++.+.. . -. +|+--|....--...-++. ..-...|..+.
T Consensus 121 g~~VLDiGcGsG~l~i~aa~-~----------------g~-----~V~gvDis~~av~~A~~na~~n~~~~~~~~~d--- 175 (254)
T d2nxca1 121 GDKVLDLGTGSGVLAIAAEK-L----------------GG-----KALGVDIDPMVLPQAEANAKRNGVRPRFLEGS--- 175 (254)
T ss_dssp TCEEEEETCTTSHHHHHHHH-T----------------TC-----EEEEEESCGGGHHHHHHHHHHTTCCCEEEESC---
T ss_pred cCEEEEcccchhHHHHHHHh-c----------------CC-----EEEEEECChHHHHHHHHHHHHcCCceeEEecc---
Confidence 46999999999998876541 0 11 4566666532222111111 11112233332
Q ss_pred ccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCce
Q 017702 141 FHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGL 220 (367)
Q Consensus 141 Fy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~ 220 (367)
....+|.+++|+++++...|- +..++..-++-|||||+
T Consensus 176 -~~~~~~~~~fD~V~ani~~~~-----------------------------------------l~~l~~~~~~~LkpGG~ 213 (254)
T d2nxca1 176 -LEAALPFGPFDLLVANLYAEL-----------------------------------------HAALAPRYREALVPGGR 213 (254)
T ss_dssp -HHHHGGGCCEEEEEEECCHHH-----------------------------------------HHHHHHHHHHHEEEEEE
T ss_pred -ccccccccccchhhhcccccc-----------------------------------------HHHHHHHHHHhcCCCcE
Confidence 123567789999998643332 22355666678999999
Q ss_pred EEEEee
Q 017702 221 MVLILA 226 (367)
Q Consensus 221 lvl~~~ 226 (367)
|+++-+
T Consensus 214 lilSgi 219 (254)
T d2nxca1 214 ALLTGI 219 (254)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 998754
|
| >d1yzha1 c.66.1.53 (A:8-211) tRNA (guanine-N(7)-)-methyltransferase TrmB {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TrmB-like domain: tRNA (guanine-N(7)-)-methyltransferase TrmB species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.03 E-value=3.1e-06 Score=74.21 Aligned_cols=111 Identities=12% Similarity=0.116 Sum_probs=72.3
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC---ccccceeeccCcc
Q 017702 64 FKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP---HARKYFAAGLPGS 140 (367)
Q Consensus 64 ~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~---~~~~~f~~gvp~S 140 (367)
-.|+|+|||+|.+++.+.+. .| +..++-.|+..+-.....+... -.+-.|..+....
T Consensus 33 plvLdIGcG~G~~~~~lA~~-----------------~p---~~~~iGid~~~~~v~~a~~~~~~~~l~Ni~~~~~da~~ 92 (204)
T d1yzha1 33 PIHVEVGSGKGAFVSGMAKQ-----------------NP---DINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSD 92 (204)
T ss_dssp CEEEEESCTTSHHHHHHHHH-----------------CT---TSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSC
T ss_pred CeEEEEeccCCHHHHHHHHH-----------------CC---CCceEEEeccHHHHHHHHHhhhhhccccceeeecCHHH
Confidence 46999999999999988631 24 5567777776544333333221 1223355555444
Q ss_pred ccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCce
Q 017702 141 FHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGL 220 (367)
Q Consensus 141 Fy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~ 220 (367)
+ ...+|++++|.++..+.-.|-.+... |.++. -..||+.-++-|||||.
T Consensus 93 l-~~~~~~~~~~~i~i~fPdPw~K~~h~-----------krRl~-------------------~~~~l~~~~~~LkpgG~ 141 (204)
T d1yzha1 93 L-TDYFEDGEIDRLYLNFSDPWPKKRHE-----------KRRLT-------------------YKTFLDTFKRILPENGE 141 (204)
T ss_dssp G-GGTSCTTCCSEEEEESCCCCCSGGGG-----------GGSTT-------------------SHHHHHHHHHHSCTTCE
T ss_pred H-hhhccCCceehhcccccccccchhhh-----------hhhhh-------------------HHHHHHHHHHhCCCCcE
Confidence 4 36789999999999999999443210 00010 02589999999999999
Q ss_pred EEEEe
Q 017702 221 MVLIL 225 (367)
Q Consensus 221 lvl~~ 225 (367)
|.+.+
T Consensus 142 l~i~T 146 (204)
T d1yzha1 142 IHFKT 146 (204)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 98765
|
| >d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 3, PRMT3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.02 E-value=6.1e-06 Score=76.34 Aligned_cols=115 Identities=17% Similarity=0.216 Sum_probs=69.3
Q ss_pred HHHHHHHHhhhcccccCCCCCCCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccch
Q 017702 40 ELISEAIADKLDLKILGFDDTLKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDF 119 (367)
Q Consensus 40 ~ll~~ai~~~~~~~~~~~~~~~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDF 119 (367)
...++||.++.. ..+.-+|+|+|||+|..++.+++. -+ . +|+-.|...+-
T Consensus 21 ~~y~~ai~~~~~--------~~~~~~VLDiGcG~G~lsl~aa~~-----------------Ga---~-~V~aid~s~~~- 70 (311)
T d2fyta1 21 ESYRDFIYQNPH--------IFKDKVVLDVGCGTGILSMFAAKA-----------------GA---K-KVLGVDQSEIL- 70 (311)
T ss_dssp HHHHHHHHHCGG--------GTTTCEEEEETCTTSHHHHHHHHT-----------------TC---S-EEEEEESSTHH-
T ss_pred HHHHHHHHhccc--------cCCcCEEEEECCCCCHHHHHHHHc-----------------CC---C-EEEEEeCHHHH-
Confidence 445566765332 123468999999999988866521 12 2 67777765421
Q ss_pred HHHhhcC----Cc-cccceeeccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHH
Q 017702 120 NTLFKSL----PH-ARKYFAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVR 194 (367)
Q Consensus 120 n~lf~~l----~~-~~~~f~~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~ 194 (367)
...+.. .. .+-.+..+ ...+--+|+.++|+++|....|.+..-
T Consensus 71 -~~a~~~~~~~~~~~~i~~~~~---~~~~l~~~~~~~D~Ivse~~~~~~~~e---------------------------- 118 (311)
T d2fyta1 71 -YQAMDIIRLNKLEDTITLIKG---KIEEVHLPVEKVDVIISEWMGYFLLFE---------------------------- 118 (311)
T ss_dssp -HHHHHHHHHTTCTTTEEEEES---CTTTSCCSCSCEEEEEECCCBTTBTTT----------------------------
T ss_pred -HHHHHHHHHhCCCccceEEEe---eHHHhcCccccceEEEEeeeeeecccc----------------------------
Confidence 111111 11 11223333 334444688999999996666543321
Q ss_pred HHHHHHHhhHHHHHHHHHHhhccCceEEE
Q 017702 195 AYSTQYKNDMESFLNARAEELVPGGLMVL 223 (367)
Q Consensus 195 ~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl 223 (367)
..+..++.+|.+-|+|||+++-
T Consensus 119 -------~~~~~~~~a~~~~Lkp~G~iip 140 (311)
T d2fyta1 119 -------SMLDSVLYAKNKYLAKGGSVYP 140 (311)
T ss_dssp -------CHHHHHHHHHHHHEEEEEEEES
T ss_pred -------cccHHHHHHHHhcCCCCcEEec
Confidence 1455788999999999999974
|
| >d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Precorrin-6Y methyltransferase (CbiT) domain: Precorrin-6Y methyltransferase (CbiT) species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=97.98 E-value=2.1e-05 Score=67.19 Aligned_cols=102 Identities=19% Similarity=0.220 Sum_probs=59.9
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC---Cccccceeecc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL---PHARKYFAAGL 137 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l---~~~~~~f~~gv 137 (367)
.+.-+|+|+|||+|..|+.+... -+ +|+--|.-.+--...=+++ .-..++ --+
T Consensus 32 ~~g~~VLDiGcGsG~~s~~lA~~-----------------~~-----~V~avD~~~~~l~~a~~n~~~~gl~~~v--~~~ 87 (186)
T d1l3ia_ 32 GKNDVAVDVGCGTGGVTLELAGR-----------------VR-----RVYAIDRNPEAISTTEMNLQRHGLGDNV--TLM 87 (186)
T ss_dssp CTTCEEEEESCTTSHHHHHHHTT-----------------SS-----EEEEEESCHHHHHHHHHHHHHTTCCTTE--EEE
T ss_pred CCCCEEEEEECCeEccccccccc-----------------ce-----EEEEecCCHHHHHHHHHHHHHcCCCcce--EEE
Confidence 44579999999999999877521 11 3555555432211111111 101111 112
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
.|+..+-+++..++|.+++.-.. .++..+++.-.+-|+|
T Consensus 88 ~gda~~~~~~~~~~D~v~~~~~~-----------------------------------------~~~~~~~~~~~~~Lkp 126 (186)
T d1l3ia_ 88 EGDAPEALCKIPDIDIAVVGGSG-----------------------------------------GELQEILRIIKDKLKP 126 (186)
T ss_dssp ESCHHHHHTTSCCEEEEEESCCT-----------------------------------------TCHHHHHHHHHHTEEE
T ss_pred ECchhhcccccCCcCEEEEeCcc-----------------------------------------ccchHHHHHHHHHhCc
Confidence 23455556677899999974211 1233577888888999
Q ss_pred CceEEEEeec
Q 017702 218 GGLMVLILAA 227 (367)
Q Consensus 218 GG~lvl~~~g 227 (367)
||++++....
T Consensus 127 gG~lvi~~~~ 136 (186)
T d1l3ia_ 127 GGRIIVTAIL 136 (186)
T ss_dssp EEEEEEEECB
T ss_pred CCEEEEEeec
Confidence 9999987754
|
| >d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.90 E-value=4.4e-05 Score=67.72 Aligned_cols=108 Identities=11% Similarity=0.030 Sum_probs=65.2
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCcc-ccceeeccCc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPHA-RKYFAAGLPG 139 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~~-~~~f~~gvp~ 139 (367)
..-.+|+|+|||+|..|..+.+.+ -| .=.||--|....--..+-+..... ....+.+..+
T Consensus 72 ~pG~~VLDlGaGsG~~t~~la~~V----------------G~---~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~ 132 (227)
T d1g8aa_ 72 KPGKSVLYLGIASGTTASHVSDIV----------------GW---EGKIFGIEFSPRVLRELVPIVEERRNIVPILGDAT 132 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHH----------------CT---TSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTT
T ss_pred CCCCEEEEeccCCCHHHHHHHHHh----------------CC---CCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECC
Confidence 345899999999999999987544 11 225777777643222222222211 1233444433
Q ss_pred cccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 140 SFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
.-..-..+..++|++++..+.++ +-..+++....-|||||
T Consensus 133 ~~~~~~~~~~~vD~i~~d~~~~~----------------------------------------~~~~~l~~~~~~LkpgG 172 (227)
T d1g8aa_ 133 KPEEYRALVPKVDVIFEDVAQPT----------------------------------------QAKILIDNAEVYLKRGG 172 (227)
T ss_dssp CGGGGTTTCCCEEEEEECCCSTT----------------------------------------HHHHHHHHHHHHEEEEE
T ss_pred CcccccccccceEEEEEEccccc----------------------------------------hHHHHHHHHHHhcccCC
Confidence 33333344568999887422111 22347888889999999
Q ss_pred eEEEEeec
Q 017702 220 LMVLILAA 227 (367)
Q Consensus 220 ~lvl~~~g 227 (367)
+++++..+
T Consensus 173 ~lvi~~ka 180 (227)
T d1g8aa_ 173 YGMIAVKS 180 (227)
T ss_dssp EEEEEEEG
T ss_pred eEEEEEEC
Confidence 99998876
|
| >d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Probable methyltransferase Rv2118c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.88 E-value=3e-05 Score=70.38 Aligned_cols=100 Identities=17% Similarity=0.250 Sum_probs=64.4
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhc-CC------cccccee
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKS-LP------HARKYFA 134 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~-l~------~~~~~f~ 134 (367)
.-.+|+|+|||+|..|+.+...+ .| .-+|+=-|.-. ++-...+. +. ..+-.|.
T Consensus 96 PG~~VLE~G~GsG~lt~~La~~v----------------gp---~G~V~~~d~~~-~~~~~Ar~n~~~~~~~~~~nv~~~ 155 (264)
T d1i9ga_ 96 PGARVLEAGAGSGALTLSLLRAV----------------GP---AGQVISYEQRA-DHAEHARRNVSGCYGQPPDNWRLV 155 (264)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH----------------CT---TSEEEEECSCH-HHHHHHHHHHHHHHTSCCTTEEEE
T ss_pred CCCEEEecCcCCcHHHHHHHHhh----------------CC---CcEEEEecCCH-HHHHHHHHhhhhhccCCCceEEEE
Confidence 35899999999999999998655 12 23566656542 22222221 11 1122244
Q ss_pred eccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHh
Q 017702 135 AGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEE 214 (367)
Q Consensus 135 ~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~E 214 (367)
.+ .+.+.-+|++++|.++. ++|.+- .+|..-++.
T Consensus 156 ~~---d~~~~~~~~~~fDaV~l--------dlp~P~-----------------------------------~~l~~~~~~ 189 (264)
T d1i9ga_ 156 VS---DLADSELPDGSVDRAVL--------DMLAPW-----------------------------------EVLDAVSRL 189 (264)
T ss_dssp CS---CGGGCCCCTTCEEEEEE--------ESSCGG-----------------------------------GGHHHHHHH
T ss_pred ec---ccccccccCCCcceEEE--------ecCCHH-----------------------------------HHHHHHHhc
Confidence 43 35566688999999985 355321 267788899
Q ss_pred hccCceEEEEeec
Q 017702 215 LVPGGLMVLILAA 227 (367)
Q Consensus 215 L~pGG~lvl~~~g 227 (367)
|||||++++..+.
T Consensus 190 LkpGG~lv~~~P~ 202 (264)
T d1i9ga_ 190 LVAGGVLMVYVAT 202 (264)
T ss_dssp EEEEEEEEEEESS
T ss_pred cCCCCEEEEEeCc
Confidence 9999999887765
|
| >d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Guanidinoacetate methyltransferase domain: Guanidinoacetate methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.86 E-value=2e-05 Score=69.54 Aligned_cols=22 Identities=23% Similarity=0.362 Sum_probs=18.5
Q ss_pred hHHHHHHHHHHhhccCceEEEE
Q 017702 203 DMESFLNARAEELVPGGLMVLI 224 (367)
Q Consensus 203 D~~~fL~~Ra~EL~pGG~lvl~ 224 (367)
|...||+.-.+-|||||+|++.
T Consensus 141 ~~~~~~~~~~r~LkpGG~~~~~ 162 (229)
T d1zx0a1 141 QFNFIKNHAFRLLKPGGVLTYC 162 (229)
T ss_dssp HHHHHHHTHHHHEEEEEEEEEC
T ss_pred CHHHHHHHHHHHcCCCcEEEEE
Confidence 6667899889999999998764
|
| >d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.83 E-value=2.8e-05 Score=68.02 Aligned_cols=107 Identities=13% Similarity=0.050 Sum_probs=60.8
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc-cccceeeccCc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH-ARKYFAAGLPG 139 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~-~~~~f~~gvp~ 139 (367)
.+.-+|+|+|||+|..+..+.+.+ | +-+|+--|....-...+-+.... .+-.++.+...
T Consensus 55 kpg~~VLDlGcG~G~~~~~la~~v-----------------~---~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~ 114 (209)
T d1nt2a_ 55 RGDERVLYLGAASGTTVSHLADIV-----------------D---EGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDAS 114 (209)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHT-----------------T---TSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTT
T ss_pred CCCCEEEEeCCcCCHHHHHHHHhc-----------------c---CCeEEEEeCCHHHHHHHHHHhhccCCceEEEeecc
Confidence 345899999999999777765322 1 22677777764333222222111 12234444433
Q ss_pred cccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCc
Q 017702 140 SFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGG 219 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 219 (367)
.-..--.....+|++++... || .|...||+.-.+-|||||
T Consensus 115 ~~~~~~~~~~~vd~v~~~~~-~~---------------------------------------~~~~~~l~~~~~~LkpgG 154 (209)
T d1nt2a_ 115 KPWKYSGIVEKVDLIYQDIA-QK---------------------------------------NQIEILKANAEFFLKEKG 154 (209)
T ss_dssp CGGGTTTTCCCEEEEEECCC-ST---------------------------------------THHHHHHHHHHHHEEEEE
T ss_pred CccccccccceEEEEEeccc-Ch---------------------------------------hhHHHHHHHHHHHhccCC
Confidence 21111122245666655322 22 144468888889999999
Q ss_pred eEEEEeec
Q 017702 220 LMVLILAA 227 (367)
Q Consensus 220 ~lvl~~~g 227 (367)
++++..-.
T Consensus 155 ~l~i~~~~ 162 (209)
T d1nt2a_ 155 EVVIMVKA 162 (209)
T ss_dssp EEEEEEEH
T ss_pred eEEEEEEc
Confidence 99998865
|
| >d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.75 E-value=1.3e-05 Score=70.95 Aligned_cols=79 Identities=15% Similarity=0.072 Sum_probs=45.5
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc--------cccce
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH--------ARKYF 133 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~--------~~~~f 133 (367)
+.-+|+|+|||+|..|..+.+.+ .| .-+|+--|.-..-....-+.+.. ....+
T Consensus 76 ~g~~VLdiG~GsGy~ta~la~l~----------------~~---~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~ 136 (224)
T d1i1na_ 76 EGAKALDVGSGSGILTACFARMV----------------GC---TGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQL 136 (224)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH----------------CT---TCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHHh----------------CC---CceEEEEcCCHHHHHHHHHhccccCcccccccceEE
Confidence 35799999999999998776433 12 22455555542111111111110 11123
Q ss_pred eeccCccccccCCCCCceeEEEecccccc
Q 017702 134 AAGLPGSFHSRLFPRSSIHFVHTSYALHW 162 (367)
Q Consensus 134 ~~gvp~SFy~~l~P~~svd~~~S~~alhW 162 (367)
..| +-+.-.++.+++|.|++..++++
T Consensus 137 ~~g---D~~~~~~~~~~fD~I~~~~~~~~ 162 (224)
T d1i1na_ 137 VVG---DGRMGYAEEAPYDAIHVGAAAPV 162 (224)
T ss_dssp EES---CGGGCCGGGCCEEEEEECSBBSS
T ss_pred EEe---ecccccchhhhhhhhhhhcchhh
Confidence 333 33455566789999999999886
|
| >d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.72 E-value=9.8e-05 Score=68.78 Aligned_cols=21 Identities=29% Similarity=0.321 Sum_probs=17.7
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAVQ 82 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~ 82 (367)
+.-+|+|+|||+|..++.+..
T Consensus 151 ~~~~vlD~GcG~G~~~~~~a~ 171 (328)
T d1nw3a_ 151 DDDLFVDLGSGVGQVVLQVAA 171 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHH
T ss_pred CCCEEEEcCCCCCHHHHHHHH
Confidence 456999999999999987764
|
| >d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein TM0748 species: Thermotoga maritima [TaxId: 2336]
Probab=97.65 E-value=6.1e-05 Score=68.36 Aligned_cols=100 Identities=19% Similarity=0.244 Sum_probs=59.0
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhc-C---Cc-cccceee
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKS-L---PH-ARKYFAA 135 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~-l---~~-~~~~f~~ 135 (367)
....+|+|+|||+|..|..+...+ .| .-+|+--|.-. ++-...+. + .- ..-.+..
T Consensus 102 ~pG~~VLDiG~GsG~lt~~lA~~~----------------~~---~G~V~~vD~~~-~~~~~A~~~~~~~g~~~~v~~~~ 161 (266)
T d1o54a_ 102 KEGDRIIDTGVGSGAMCAVLARAV----------------GS---SGKVFAYEKRE-EFAKLAESNLTKWGLIERVTIKV 161 (266)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHT----------------TT---TCEEEEECCCH-HHHHHHHHHHHHTTCGGGEEEEC
T ss_pred CCCCEEEECCCCCCHHHHHHHHHh----------------CC---CcEEEEEeCCH-HHHHHHHHHHHHhccccCcEEEe
Confidence 345899999999999999887443 12 22466656553 22222211 1 11 1111222
Q ss_pred ccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhh
Q 017702 136 GLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEEL 215 (367)
Q Consensus 136 gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL 215 (367)
+. ...-++..++|.++- ++|.. ..+|..-.+-|
T Consensus 162 ~d----~~~~~~~~~~D~V~~--------d~p~p-----------------------------------~~~l~~~~~~L 194 (266)
T d1o54a_ 162 RD----ISEGFDEKDVDALFL--------DVPDP-----------------------------------WNYIDKCWEAL 194 (266)
T ss_dssp CC----GGGCCSCCSEEEEEE--------CCSCG-----------------------------------GGTHHHHHHHE
T ss_pred cc----ccccccccceeeeEe--------cCCCH-----------------------------------HHHHHHHHhhc
Confidence 22 234466778888864 23321 13678888999
Q ss_pred ccCceEEEEeec
Q 017702 216 VPGGLMVLILAA 227 (367)
Q Consensus 216 ~pGG~lvl~~~g 227 (367)
||||+|++..+.
T Consensus 195 KpGG~lv~~~P~ 206 (266)
T d1o54a_ 195 KGGGRFATVCPT 206 (266)
T ss_dssp EEEEEEEEEESS
T ss_pred CCCCEEEEEeCc
Confidence 999999987765
|
| >d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Sulfolobus tokodaii [TaxId: 111955]
Probab=97.61 E-value=8.5e-05 Score=65.71 Aligned_cols=20 Identities=30% Similarity=0.433 Sum_probs=17.0
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAV 81 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~ 81 (367)
+.-+|+|+|||+|..|..+.
T Consensus 70 ~g~~VLdIG~GsGy~ta~La 89 (224)
T d1vbfa_ 70 KGQKVLEIGTGIGYYTALIA 89 (224)
T ss_dssp TTCEEEEECCTTSHHHHHHH
T ss_pred ccceEEEecCCCCHHHHHHH
Confidence 45699999999999998664
|
| >d1af7a2 c.66.1.8 (A:92-284) Chemotaxis receptor methyltransferase CheR, C-terminal domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Chemotaxis receptor methyltransferase CheR, C-terminal domain domain: Chemotaxis receptor methyltransferase CheR, C-terminal domain species: Salmonella typhimurium [TaxId: 90371]
Probab=97.50 E-value=0.00016 Score=62.13 Aligned_cols=113 Identities=17% Similarity=0.278 Sum_probs=67.6
Q ss_pred CCCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhc------------CC
Q 017702 60 TLKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKS------------LP 127 (367)
Q Consensus 60 ~~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~------------l~ 127 (367)
..+++||.+.|||+|-=.-.+.-.+-+ .... ... .++++-.|.-. ..|-+. ++
T Consensus 22 ~~~~lrIwsaGCstGeE~YSlA~~l~e----~~~~-----~~~---~~~I~atDi~~---~~l~~A~~g~y~~~~~~~~~ 86 (193)
T d1af7a2 22 RHGEYRVWSAAASTGEEPYSIAITLAD----ALGM-----APG---RWKVFASDIDT---EVLEKARSGIYRLSELKTLS 86 (193)
T ss_dssp SCSCEEEEESCCTTTHHHHHHHHHHHH----HHCS-----CTT---SEEEEEEESCH---HHHHHHHHTEEEGGGGTTSC
T ss_pred cCCCeEEEEeCCCCchhHHHHHHHHHH----hhhh-----cCC---ceEEEeecCCh---HHhhHhhcCcccHHHHhhhh
Confidence 456799999999999865544432322 1111 123 67899999854 222211 11
Q ss_pred cc--ccceeeccCcc---------------cc-c-----cCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCccc
Q 017702 128 HA--RKYFAAGLPGS---------------FH-S-----RLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQ 184 (367)
Q Consensus 128 ~~--~~~f~~gvp~S---------------Fy-~-----~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~ 184 (367)
+. ..||.-..++. |. . .-.|.+.+|+|+|-+.|+.++.
T Consensus 87 ~~~~~~yf~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~fDvI~CRNVLiYf~~------------------- 147 (193)
T d1af7a2 87 PQQLQRYFMRGTGPHEGLVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDK------------------- 147 (193)
T ss_dssp HHHHHHHEEECCTTSCSEEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCH-------------------
T ss_pred HHHHhhceeecCCCccceeehHHHHHHHHHHhhhhccccccCCCCCccEEEeehhHHhcCH-------------------
Confidence 10 13443322111 11 1 1234578999999999999763
Q ss_pred ccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEEE
Q 017702 185 CSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVL 223 (367)
Q Consensus 185 ~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl 223 (367)
....+.|+.-++.|+|||.|++
T Consensus 148 -----------------~~~~~vl~~l~~~L~pGG~L~l 169 (193)
T d1af7a2 148 -----------------TTQEDILRRFVPLLKPDGLLFA 169 (193)
T ss_dssp -----------------HHHHHHHHHHGGGEEEEEEEEE
T ss_pred -----------------HHHHHHHHHHHHHhCCCcEEEE
Confidence 1334688889999999998764
|
| >d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N5-glutamine methyltransferase, HemK domain: N5-glutamine methyltransferase, HemK species: Escherichia coli [TaxId: 562]
Probab=97.45 E-value=0.00018 Score=65.50 Aligned_cols=129 Identities=14% Similarity=0.192 Sum_probs=69.0
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC---ccccceeecc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP---HARKYFAAGL 137 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~---~~~~~f~~gv 137 (367)
.+..+|+|+|||+|..++.+... .| ..+|+..|....-.+..=++.. -.+--|..
T Consensus 107 ~~~~~vlDlGtGSG~I~i~la~~-----------------~p---~~~v~avDis~~Al~~A~~Na~~~~~~~v~~~~-- 164 (274)
T d2b3ta1 107 EQPCRILDLGTGTGAIALALASE-----------------RP---DCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQ-- 164 (274)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHH-----------------CT---TSEEEEECSSHHHHHHHHHHHHHHTCCSEEEEC--
T ss_pred ccccceeeeehhhhHHHHHHHhh-----------------CC---cceeeeccchhHHHhHHHHHHHHhCcccceeee--
Confidence 45689999999999998887632 23 4578888986422222222211 11112333
Q ss_pred CccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 138 PGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
+++++. +|.+.+|+++|+ |+-+......... .+. .. .|...-.--+-....+..+++.-.+-|+|
T Consensus 165 -~d~~~~-~~~~~fDlIvsN---------PPYi~~~~~~~~~--~v~-~~-eP~~AL~~g~dGl~~~~~i~~~a~~~L~~ 229 (274)
T d2b3ta1 165 -SDWFSA-LAGQQFAMIVSN---------PPYIDEQDPHLQQ--GDV-RF-EPLTALVAADSGMADIVHIIEQSRNALVS 229 (274)
T ss_dssp -CSTTGG-GTTCCEEEEEEC---------CCCBCTTCHHHHS--SGG-GS-SCSTTTBCHHHHTHHHHHHHHHHGGGEEE
T ss_pred -cccccc-cCCCceeEEEec---------chhhhhhhhcccc--ccc-cc-chhhhcccccccchHHHHHHHHHHHhcCC
Confidence 345554 456799999995 5444321100000 000 00 00000000011223445688888888999
Q ss_pred CceEEEEee
Q 017702 218 GGLMVLILA 226 (367)
Q Consensus 218 GG~lvl~~~ 226 (367)
||.++++..
T Consensus 230 ~G~l~lEig 238 (274)
T d2b3ta1 230 GGFLLLEHG 238 (274)
T ss_dssp EEEEEEECC
T ss_pred CCEEEEEEC
Confidence 999999874
|
| >d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.43 E-value=0.00016 Score=69.31 Aligned_cols=22 Identities=9% Similarity=0.148 Sum_probs=18.5
Q ss_pred hHHHHHHHHHHhhccCceEEEE
Q 017702 203 DMESFLNARAEELVPGGLMVLI 224 (367)
Q Consensus 203 D~~~fL~~Ra~EL~pGG~lvl~ 224 (367)
|+...|....+.|||||++|..
T Consensus 311 ~l~~~L~ei~r~LKPGGrIVs~ 332 (406)
T d1u2za_ 311 DLNKKVEKILQTAKVGCKIISL 332 (406)
T ss_dssp HHHHHHHHHHTTCCTTCEEEES
T ss_pred HHHHHHHHHHHhcCCCcEEEEe
Confidence 5667888899999999998764
|
| >d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein FLJ20628 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.03 E-value=0.00063 Score=63.17 Aligned_cols=22 Identities=14% Similarity=0.243 Sum_probs=19.4
Q ss_pred ceEEeeecCCCCcccHHHHHHH
Q 017702 63 PFKIADLGCSVGPNTLLAVQNI 84 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~i 84 (367)
.-+|+|+|||+|..|+.+...+
T Consensus 99 G~rVLE~GtGsG~lt~~LAr~v 120 (324)
T d2b25a1 99 GDTVLEAGSGSGGMSLFLSKAV 120 (324)
T ss_dssp TCEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEecccccHHHHHHHHHh
Confidence 4799999999999999998655
|
| >d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=96.91 E-value=0.0015 Score=57.08 Aligned_cols=80 Identities=11% Similarity=0.151 Sum_probs=44.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCc--cc-hHHHhhcCCccccceeeccC
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSD--ND-FNTLFKSLPHARKYFAAGLP 138 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~--ND-Fn~lf~~l~~~~~~f~~gvp 138 (367)
+.-+|+|+|||+|..|..+...+ . . . |+--|.-. -+ -...++.+.-.+..+..|..
T Consensus 78 ~g~~VLeIGsGsGY~taila~l~-g---------------~---~--V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~ 136 (215)
T d1jg1a_ 78 PGMNILEVGTGSGWNAALISEIV-K---------------T---D--VYTIERIPELVEFAKRNLERAGVKNVHVILGDG 136 (215)
T ss_dssp TTCCEEEECCTTSHHHHHHHHHH-C---------------S---C--EEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG
T ss_pred ccceEEEecCCCChhHHHHHHhh-C---------------c---e--eEEEeccHHHHHHHHHHHHHcCCceeEEEECcc
Confidence 34799999999999998775322 1 1 1 22111110 01 11122222223344555542
Q ss_pred ccccccCCCCCceeEEEeccccccccCCCc
Q 017702 139 GSFHSRLFPRSSIHFVHTSYALHWLSKVPK 168 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~~alhWLs~~P~ 168 (367)
..-..+.+.+|.|+...++.. +|.
T Consensus 137 ---~~g~~~~~pfD~Iiv~~a~~~---ip~ 160 (215)
T d1jg1a_ 137 ---SKGFPPKAPYDVIIVTAGAPK---IPE 160 (215)
T ss_dssp ---GGCCGGGCCEEEEEECSBBSS---CCH
T ss_pred ---ccCCcccCcceeEEeeccccc---CCH
Confidence 333455678999999988864 564
|
| >d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein TTHA1280, middle and C-terminal domains species: Thermus thermophilus [TaxId: 274]
Probab=96.74 E-value=0.0085 Score=54.96 Aligned_cols=114 Identities=11% Similarity=-0.001 Sum_probs=67.0
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC---CccccceeeccCc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL---PHARKYFAAGLPG 139 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l---~~~~~~f~~gvp~ 139 (367)
.-+|+|++||+|..|+.+.... . +|+..|....--...-+++ .-.+--|+.+...
T Consensus 146 g~rVLDl~~gtG~~s~~~a~g~---------------------~-~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~ 203 (318)
T d1wxxa2 146 GERALDVFSYAGGFALHLALGF---------------------R-EVVAVDSSAEALRRAEENARLNGLGNVRVLEANAF 203 (318)
T ss_dssp EEEEEEETCTTTHHHHHHHHHE---------------------E-EEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHH
T ss_pred CCeeeccCCCCcHHHHHHHhcC---------------------C-cEEeecchHHHHHHHHHHHHHcCCCCcceeeccHH
Confidence 4799999999999998654200 1 4666666532211111111 0112234555544
Q ss_pred cccccCC-CCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccC
Q 017702 140 SFHSRLF-PRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPG 218 (367)
Q Consensus 140 SFy~~l~-P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 218 (367)
.+.+++. ...++|+|++ ++|+...++ . -...+.+++..++..-.+-|+||
T Consensus 204 ~~~~~~~~~~~~fD~Vi~--------DpP~~~~~~-------~--------------~~~~~~~~~~~l~~~a~~lLkpG 254 (318)
T d1wxxa2 204 DLLRRLEKEGERFDLVVL--------DPPAFAKGK-------K--------------DVERAYRAYKEVNLRAIKLLKEG 254 (318)
T ss_dssp HHHHHHHHTTCCEEEEEE--------CCCCSCCST-------T--------------SHHHHHHHHHHHHHHHHHTEEEE
T ss_pred HHhhhhHhhhcCCCEEEE--------cCCccccch-------H--------------HHHHHHHHHHHHHHHHHHHcCCC
Confidence 4444443 4568999998 334321110 0 02345567777999999999999
Q ss_pred ceEEEEeec
Q 017702 219 GLMVLILAA 227 (367)
Q Consensus 219 G~lvl~~~g 227 (367)
|.|+++...
T Consensus 255 G~Lv~~scs 263 (318)
T d1wxxa2 255 GILATASCS 263 (318)
T ss_dssp EEEEEEECC
T ss_pred CEEEEEeCC
Confidence 999887765
|
| >d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermotoga maritima [TaxId: 2336]
Probab=96.62 E-value=0.0011 Score=56.77 Aligned_cols=25 Identities=32% Similarity=0.587 Sum_probs=21.7
Q ss_pred hHHHHHHHHHHhhccCceEEEEeec
Q 017702 203 DMESFLNARAEELVPGGLMVLILAA 227 (367)
Q Consensus 203 D~~~fL~~Ra~EL~pGG~lvl~~~g 227 (367)
.....|..+..-|+|||++++..+-
T Consensus 119 ~~~~~L~~a~~~Lk~gG~l~ii~f~ 143 (192)
T d1m6ya2 119 NLKEFLKKAEDLLNPGGRIVVISFH 143 (192)
T ss_dssp HHHHHHHHGGGGEEEEEEEEEEESS
T ss_pred hHHHHHHHHHHhcCCCCeeeeeccc
Confidence 4567899999999999999988875
|
| >d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein PH1915, middle and C-terminal domains species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.46 E-value=0.011 Score=54.20 Aligned_cols=115 Identities=16% Similarity=0.070 Sum_probs=65.2
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcC---C-ccccceeeccC
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSL---P-HARKYFAAGLP 138 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l---~-~~~~~f~~gvp 138 (367)
--+|+|+|||+|..|+.++. . .+ . +|+..|+...--...=+++ . ..+.-|..|.-
T Consensus 146 g~~VLDl~~g~G~~si~~a~------------~-----ga---~-~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~ 204 (324)
T d2as0a2 146 GDRVLDVFTYTGGFAIHAAI------------A-----GA---D-EVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSA 204 (324)
T ss_dssp TCEEEETTCTTTHHHHHHHH------------T-----TC---S-EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCH
T ss_pred CCeeecccCcccchhhhhhh------------c-----CC---c-EEEeecCCHHHHHHHHHHHHHcCCCccceeeechh
Confidence 46999999999999987652 0 11 2 5677777532111111111 0 01122444432
Q ss_pred ccccccCC-CCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Q 017702 139 GSFHSRLF-PRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVP 217 (367)
Q Consensus 139 ~SFy~~l~-P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 217 (367)
-.+..++. ...++|+|++ ++|.....+ + . ...+.++...++..-.+-|+|
T Consensus 205 ~~~~~~~~~~~~~fD~Vi~--------DpP~~~~~~------~-------~--------~~~~~~~y~~l~~~a~~ll~p 255 (324)
T d2as0a2 205 FEEMEKLQKKGEKFDIVVL--------DPPAFVQHE------K-------D--------LKAGLRAYFNVNFAGLNLVKD 255 (324)
T ss_dssp HHHHHHHHHTTCCEEEEEE--------CCCCSCSSG------G-------G--------HHHHHHHHHHHHHHHHTTEEE
T ss_pred hhhhHHHHhccCCCCchhc--------CCccccCCH------H-------H--------HHHHHHHHHHHHHHHHHHcCC
Confidence 22222222 3468999998 344321110 0 0 234556777799999999999
Q ss_pred CceEEEEeec
Q 017702 218 GGLMVLILAA 227 (367)
Q Consensus 218 GG~lvl~~~g 227 (367)
||+|+++...
T Consensus 256 GG~lv~~s~s 265 (324)
T d2as0a2 256 GGILVTCSCS 265 (324)
T ss_dssp EEEEEEEECC
T ss_pred CcEEEEEeCC
Confidence 9999998865
|
| >d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Putative methyltransferase SPy1538 species: Streptococcus pyogenes [TaxId: 1314]
Probab=96.33 E-value=0.0046 Score=50.39 Aligned_cols=20 Identities=25% Similarity=0.175 Sum_probs=16.5
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAV 81 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~ 81 (367)
+.-+|+|+|||+|..++.++
T Consensus 14 ~g~~vlDl~~GtG~~~iea~ 33 (152)
T d2esra1 14 NGGRVLDLFAGSGGLAIEAV 33 (152)
T ss_dssp CSCEEEEETCTTCHHHHHHH
T ss_pred CCCeEEEcCCccCHHHHHHH
Confidence 34799999999999888654
|
| >d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.31 E-value=0.0023 Score=56.00 Aligned_cols=21 Identities=24% Similarity=0.192 Sum_probs=18.1
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAVQ 82 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~ 82 (367)
+.-+|+|+|||+|..|..+..
T Consensus 80 ~g~~VLeIGtGsGY~ta~la~ 100 (223)
T d1r18a_ 80 PGARILDVGSGSGYLTACFYR 100 (223)
T ss_dssp TTCEEEEESCTTSHHHHHHHH
T ss_pred CCCeEEEecCCCCHHHHHHHH
Confidence 457999999999999998853
|
| >d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Methyltransferase TTHA0928 species: Thermus thermophilus [TaxId: 274]
Probab=96.06 E-value=0.0022 Score=53.58 Aligned_cols=20 Identities=20% Similarity=0.061 Sum_probs=16.1
Q ss_pred CceEEeeecCCCCcccHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAV 81 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~ 81 (367)
+.-+|+|+|||+|..++.++
T Consensus 41 ~g~~vLDl~~G~G~~~i~a~ 60 (171)
T d1ws6a1 41 RRGRFLDPFAGSGAVGLEAA 60 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHH
T ss_pred CCCeEEEeccccchhhhhhh
Confidence 34699999999999887554
|
| >d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Met-10+ protein-like domain: Hypothetical protein PH0793 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=95.72 E-value=0.031 Score=49.62 Aligned_cols=70 Identities=10% Similarity=0.008 Sum_probs=44.2
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC--c-c-ccceeecc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP--H-A-RKYFAAGL 137 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~--~-~-~~~f~~gv 137 (367)
+..+|+|+|||+|..|+.+++. .. . +|+..|+-.+-+..+-+++. . . +-.+..|+
T Consensus 107 ~g~~VlD~~aG~G~~~l~~a~~-----------------~~---~-~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D 165 (260)
T d2frna1 107 PDELVVDMFAGIGHLSLPIAVY-----------------GK---A-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMD 165 (260)
T ss_dssp TTCEEEETTCTTTTTHHHHHHH-----------------TC---C-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSC
T ss_pred CccEEEECcceEcHHHHHHHHh-----------------CC---c-EEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcc
Confidence 3479999999999999977521 11 2 68999997655555444432 1 1 22344555
Q ss_pred CccccccCCCCCceeEEEe
Q 017702 138 PGSFHSRLFPRSSIHFVHT 156 (367)
Q Consensus 138 p~SFy~~l~P~~svd~~~S 156 (367)
... +.+.+.+|.+++
T Consensus 166 ~~~----~~~~~~~D~Ii~ 180 (260)
T d2frna1 166 NRD----FPGENIADRILM 180 (260)
T ss_dssp TTT----CCCCSCEEEEEE
T ss_pred hHH----hccCCCCCEEEE
Confidence 333 456788998875
|
| >d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Methylase YhhF species: Escherichia coli [TaxId: 562]
Probab=95.70 E-value=0.035 Score=46.38 Aligned_cols=18 Identities=22% Similarity=0.058 Sum_probs=16.5
Q ss_pred eEEeeecCCCCcccHHHH
Q 017702 64 FKIADLGCSVGPNTLLAV 81 (367)
Q Consensus 64 ~~IaD~GCs~G~nT~~~~ 81 (367)
.+|+|++||+|..++.++
T Consensus 45 ~~vLDlfaGsG~~gieal 62 (183)
T d2fpoa1 45 AQCLDCFAGSGALGLEAL 62 (183)
T ss_dssp CEEEETTCTTCHHHHHHH
T ss_pred hhhhhhhccccceeeeEE
Confidence 589999999999999776
|
| >d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Putative methyltransferase Atu0340 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=95.40 E-value=0.069 Score=48.55 Aligned_cols=117 Identities=21% Similarity=0.172 Sum_probs=66.0
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhc-----CCccccceee
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKS-----LPHARKYFAA 135 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~-----l~~~~~~f~~ 135 (367)
.+..+|+|++|++|..|+.++.. - - +|+.-|....--...-++ +...+--|+.
T Consensus 131 ~~~~rVLdlf~~tG~~sl~aa~~-----------------G----A-~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~ 188 (309)
T d2igta1 131 DRPLKVLNLFGYTGVASLVAAAA-----------------G----A-EVTHVDASKKAIGWAKENQVLAGLEQAPIRWIC 188 (309)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT-----------------T----C-EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEEC
T ss_pred cCCCeEEEecCCCcHHHHHHHhC-----------------C----C-eEEEEeChHHHHHHHHHhhhhhcccCCcEEEEe
Confidence 34579999999999999977521 0 1 466667653221111111 1122223566
Q ss_pred ccCccccccCC-CCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHh
Q 017702 136 GLPGSFHSRLF-PRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEE 214 (367)
Q Consensus 136 gvp~SFy~~l~-P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~E 214 (367)
++--.|..+.. ..+.+|+|+. +.|.-..++. +.++ ..+.|+...++...+-
T Consensus 189 ~D~~~~l~~~~~~~~~fD~Iil--------DPP~f~~~~~------~~~~--------------~~~~~~~~l~~~~~~l 240 (309)
T d2igta1 189 EDAMKFIQREERRGSTYDIILT--------DPPKFGRGTH------GEVW--------------QLFDHLPLMLDICREI 240 (309)
T ss_dssp SCHHHHHHHHHHHTCCBSEEEE--------CCCSEEECTT------CCEE--------------EHHHHHHHHHHHHHHT
T ss_pred CCHHHhHHHHhhcCCCCCEEEE--------CCCccccccc------chhH--------------HHHHHHHHHHHHHHHh
Confidence 65555555443 4568899988 3332212211 1111 1234555677777788
Q ss_pred hccCceEEEEeec
Q 017702 215 LVPGGLMVLILAA 227 (367)
Q Consensus 215 L~pGG~lvl~~~g 227 (367)
|+|||.+++.+..
T Consensus 241 l~~~g~~ll~t~~ 253 (309)
T d2igta1 241 LSPKALGLVLTAY 253 (309)
T ss_dssp BCTTCCEEEEEEC
T ss_pred cCCCCCEEEEecC
Confidence 8999987777765
|
| >d2f8la1 c.66.1.45 (A:2-329) Hypothetical protein Lmo1582 {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N-6 DNA Methylase-like domain: Hypothetical protein Lmo1582 species: Listeria monocytogenes [TaxId: 1639]
Probab=95.36 E-value=0.023 Score=51.57 Aligned_cols=126 Identities=12% Similarity=0.074 Sum_probs=65.8
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhc--CCccccceeeccC
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKS--LPHARKYFAAGLP 138 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~--l~~~~~~f~~gvp 138 (367)
.+..+|+|.|||+|...+.++..+ . .. ..+ .++++-.|.-..-....-.. +......+..+.
T Consensus 116 ~~~~~vlDp~~GsG~~l~~~~~~l----~----~~----~~~---~~~~~g~di~~~~~~~a~~~~~~~~~~~~~~~~d- 179 (328)
T d2f8la1 116 KKNVSILDPACGTANLLTTVINQL----E----LK----GDV---DVHASGVDVDDLLISLALVGADLQRQKMTLLHQD- 179 (328)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHH----H----TT----SSC---EEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESC-
T ss_pred CCCCEEEeCCCCcchhHHHHHHHH----H----hc----cCc---cceEEEecccHHHHHHHHHHHHHhhhhhhhhccc-
Confidence 456899999999998877666444 1 11 123 67888878743221111000 111111122211
Q ss_pred ccccccCCCCCceeEEEecccc--ccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhc
Q 017702 139 GSFHSRLFPRSSIHFVHTSYAL--HWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELV 216 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~~al--hWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~ 216 (367)
+. ...|...+|+++++=-+ +|.... ..+....+..+. . .-...|+..-..-|+
T Consensus 180 --~~-~~~~~~~fD~vi~NPPy~~~~~~~~----~~~~~~~~~~~~-----~-------------~~~~~Fi~~~~~~Lk 234 (328)
T d2f8la1 180 --GL-ANLLVDPVDVVISDLPVGYYPDDEN----AKTFELCREEGH-----S-------------FAHFLFIEQGMRYTK 234 (328)
T ss_dssp --TT-SCCCCCCEEEEEEECCCSEESCHHH----HTTSTTCCSSSC-----E-------------EHHHHHHHHHHHTEE
T ss_pred --cc-cccccccccccccCCCCCCCccchh----hhhcchhcccCc-----c-------------hHHHHHHHHHHHhcC
Confidence 11 23466789999997332 221100 000000001110 0 012348888899999
Q ss_pred cCceEEEEeec
Q 017702 217 PGGLMVLILAA 227 (367)
Q Consensus 217 pGG~lvl~~~g 227 (367)
|||++++.++.
T Consensus 235 ~~G~~~~I~p~ 245 (328)
T d2f8la1 235 PGGYLFFLVPD 245 (328)
T ss_dssp EEEEEEEEEEG
T ss_pred CCCceEEEecC
Confidence 99999999986
|
| >d2ih2a1 c.66.1.27 (A:21-243) DNA methylase TaqI, N-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: DNA methylase TaqI, N-terminal domain domain: DNA methylase TaqI, N-terminal domain species: Thermus aquaticus [TaxId: 271]
Probab=95.01 E-value=0.17 Score=42.15 Aligned_cols=23 Identities=35% Similarity=0.719 Sum_probs=19.8
Q ss_pred HHHHHHHHHhhccCceEEEEeec
Q 017702 205 ESFLNARAEELVPGGLMVLILAA 227 (367)
Q Consensus 205 ~~fL~~Ra~EL~pGG~lvl~~~g 227 (367)
..|+..-.+-|++||++++.++.
T Consensus 124 ~~Fi~~al~~lk~~G~~~~I~p~ 146 (223)
T d2ih2a1 124 GAFLEKAVRLLKPGGVLVFVVPA 146 (223)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEG
T ss_pred HHHHHHHHHhcccCCceEEEEee
Confidence 45888888899999999999875
|
| >d2h00a1 c.66.1.54 (A:5-254) Methyltransferase 10 domain containing protein METT10D {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Methyltransferase 10 domain domain: Methyltransferase 10 domain containing protein METT10D species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.75 E-value=0.058 Score=47.38 Aligned_cols=76 Identities=12% Similarity=0.006 Sum_probs=43.3
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc---cccce--ee
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH---ARKYF--AA 135 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~---~~~~f--~~ 135 (367)
.+..+|+|+|||+|.-++.+.... | ..+++-.|....-.+.--+++.. ...+. -.
T Consensus 60 ~~~~~~LDiGtGsg~I~~~l~~~~-----------------~---~~~~~~~Di~~~al~~A~~N~~~n~l~~~~~~~~~ 119 (250)
T d2h00a1 60 STLRRGIDIGTGASCIYPLLGATL-----------------N---GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKV 119 (250)
T ss_dssp CCCCEEEEESCTTTTHHHHHHHHH-----------------H---CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEEC
T ss_pred cccceEEEeCCCchHHHHHHHHhC-----------------C---CccccceecCHHHHHHHHHHHHHhCCCcceeeeee
Confidence 456899999999999999887543 1 23567777754222222222110 11121 12
Q ss_pred ccCccccccCC--CCCceeEEEe
Q 017702 136 GLPGSFHSRLF--PRSSIHFVHT 156 (367)
Q Consensus 136 gvp~SFy~~l~--P~~svd~~~S 156 (367)
.....++..+. ..+++|+++|
T Consensus 120 ~~~~~~~~~~~~~~~~~fD~ivs 142 (250)
T d2h00a1 120 PQKTLLMDALKEESEIIYDFCMC 142 (250)
T ss_dssp CTTCSSTTTSTTCCSCCBSEEEE
T ss_pred ccHHhhhhhhhhcccCceeEEEe
Confidence 23334444444 3568999999
|
| >d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Putative methylase EF2452 species: Enterococcus faecalis [TaxId: 1351]
Probab=94.40 E-value=0.065 Score=44.68 Aligned_cols=21 Identities=24% Similarity=0.052 Sum_probs=18.0
Q ss_pred CceEEeeecCCCCcccHHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAVQ 82 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~ 82 (367)
..-+|+|++||+|..++..++
T Consensus 41 ~~~~vLDlfaGsG~~g~ea~s 61 (182)
T d2fhpa1 41 DGGMALDLYSGSGGLAIEAVS 61 (182)
T ss_dssp SSCEEEETTCTTCHHHHHHHH
T ss_pred CCCEEEEcccccccccceeee
Confidence 357999999999999997763
|
| >d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein Ta1320 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=94.08 E-value=0.038 Score=47.02 Aligned_cols=19 Identities=16% Similarity=0.022 Sum_probs=15.6
Q ss_pred ceEEeeecCCCCcccHHHH
Q 017702 63 PFKIADLGCSVGPNTLLAV 81 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~ 81 (367)
.-+|+|+|||+|..++.+.
T Consensus 49 Gk~VLDlGcGtG~l~i~a~ 67 (197)
T d1ne2a_ 49 GRSVIDAGTGNGILACGSY 67 (197)
T ss_dssp TSEEEEETCTTCHHHHHHH
T ss_pred CCEEEEeCCCCcHHHHHHH
Confidence 4699999999998886543
|
| >d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein SMu776, middle and C-terminal domains species: Streptococcus mutans [TaxId: 1309]
Probab=93.94 E-value=0.086 Score=47.94 Aligned_cols=115 Identities=12% Similarity=0.052 Sum_probs=66.9
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhc-----CCccccceeecc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKS-----LPHARKYFAAGL 137 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~-----l~~~~~~f~~gv 137 (367)
.-+|+|+.|++|..|+.++. . .. . .|+.-|+...--...-.+ +...+-.|+.+.
T Consensus 145 g~~VLdlf~~~G~~sl~aa~------------~-----ga---~-~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d 203 (317)
T d2b78a2 145 GKTVLNLFSYTAAFSVAAAM------------G-----GA---M-ATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMD 203 (317)
T ss_dssp TCEEEEETCTTTHHHHHHHH------------T-----TB---S-EEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESC
T ss_pred CCceeecCCCCcHHHHHHHh------------C-----CC---c-eEEEecCCHHHHHHHHHHHHHhcccCcceEEEEcc
Confidence 46999999999999976541 0 11 1 466667753221111111 222233466666
Q ss_pred CccccccCCC-CCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhc
Q 017702 138 PGSFHSRLFP-RSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELV 216 (367)
Q Consensus 138 p~SFy~~l~P-~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~ 216 (367)
--.+.+++.. ...+|+|+. ++| .... ++..+ ..+.+|+..+++.-.+-|+
T Consensus 204 ~~~~l~~~~~~~~~fD~Ii~--------DPP-~f~~------~~~~~--------------~~~~~~~~~L~~~a~~ll~ 254 (317)
T d2b78a2 204 VFDYFKYARRHHLTYDIIII--------DPP-SFAR------NKKEV--------------FSVSKDYHKLIRQGLEILS 254 (317)
T ss_dssp HHHHHHHHHHTTCCEEEEEE--------CCC-CC-----------CC--------------CCHHHHHHHHHHHHHHTEE
T ss_pred HHHHHHHHHhhcCCCCEEEE--------cCh-hhcc------chhHH--------------HHHHHHHHHHHHHHHHHcC
Confidence 5555555543 357999988 233 2211 11111 1245677778988889999
Q ss_pred cCceEEEEeec
Q 017702 217 PGGLMVLILAA 227 (367)
Q Consensus 217 pGG~lvl~~~g 227 (367)
|||.|++++..
T Consensus 255 pgG~l~~~scs 265 (317)
T d2b78a2 255 ENGLIIASTNA 265 (317)
T ss_dssp EEEEEEEEECC
T ss_pred CCCEEEEEeCC
Confidence 99999988764
|
| >d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein PH1948 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=93.88 E-value=0.043 Score=46.59 Aligned_cols=68 Identities=18% Similarity=0.135 Sum_probs=39.1
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc--cccceeeccCcc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH--ARKYFAAGLPGS 140 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~--~~~~f~~gvp~S 140 (367)
.-+|+|+|||+|..++.++.. .+ ..|+..|.-..-....-+++.. ...-+..+....
T Consensus 47 g~~vLDlg~GtG~l~i~a~~~-----------------g~----~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~ 105 (201)
T d1wy7a1 47 GKVVADLGAGTGVLSYGALLL-----------------GA----KEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSE 105 (201)
T ss_dssp TCEEEEETCTTCHHHHHHHHT-----------------TC----SEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGG
T ss_pred CCEEEECcCcchHHHHHHHHc-----------------CC----CEEEEEcCcHHHHHHHHHHHHHcCCCceEEECchhh
Confidence 468999999999988765410 11 2577777764333333333322 122233333222
Q ss_pred ccccCCCCCceeEEEec
Q 017702 141 FHSRLFPRSSIHFVHTS 157 (367)
Q Consensus 141 Fy~~l~P~~svd~~~S~ 157 (367)
+++.+|+|+++
T Consensus 106 ------~~~~fD~Vi~n 116 (201)
T d1wy7a1 106 ------FNSRVDIVIMN 116 (201)
T ss_dssp ------CCCCCSEEEEC
T ss_pred ------hCCcCcEEEEc
Confidence 35679999984
|
| >d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N5-glutamine methyltransferase, HemK domain: N5-glutamine methyltransferase, HemK species: Thermotoga maritima [TaxId: 2336]
Probab=92.57 E-value=0.14 Score=45.48 Aligned_cols=73 Identities=19% Similarity=0.271 Sum_probs=41.0
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCC---ccccceeeccC
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLP---HARKYFAAGLP 138 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~---~~~~~f~~gvp 138 (367)
+..+|+|+|||+|.-++.+. .. | ..+|+..|....-....-++.. ....+++ ..
T Consensus 110 ~~~~vld~g~GsG~i~~~la-~~-----------------~---~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i--~~ 166 (271)
T d1nv8a_ 110 GIKTVADIGTGSGAIGVSVA-KF-----------------S---DAIVFATDVSSKAVEIARKNAERHGVSDRFFV--RK 166 (271)
T ss_dssp TCCEEEEESCTTSHHHHHHH-HH-----------------S---SCEEEEEESCHHHHHHHHHHHHHTTCTTSEEE--EE
T ss_pred cccEEEEeeeeeehhhhhhh-hc-----------------c---cceeeechhhhhHHHHHHHHHHHcCCCceeEE--ee
Confidence 35689999999998776653 11 2 3478888887433333222221 1112222 22
Q ss_pred ccccccCC-CCCceeEEEec
Q 017702 139 GSFHSRLF-PRSSIHFVHTS 157 (367)
Q Consensus 139 ~SFy~~l~-P~~svd~~~S~ 157 (367)
+++++.+. ..+.+|+++|+
T Consensus 167 ~~~~~~~~~~~~~fDlIVsN 186 (271)
T d1nv8a_ 167 GEFLEPFKEKFASIEMILSN 186 (271)
T ss_dssp SSTTGGGGGGTTTCCEEEEC
T ss_pred cccccccccccCcccEEEEc
Confidence 34444333 12689999993
|
| >d1ej0a_ c.66.1.2 (A:) RNA methyltransferase FtsJ {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: RNA methyltransferase FtsJ domain: RNA methyltransferase FtsJ species: Escherichia coli [TaxId: 562]
Probab=92.20 E-value=0.42 Score=39.47 Aligned_cols=22 Identities=23% Similarity=0.312 Sum_probs=17.9
Q ss_pred CCceEEeeecCCCCcccHHHHH
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQ 82 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~ 82 (367)
.+..+|+|+|||.|.-|..+.+
T Consensus 21 k~~~~vlDLg~aPGgw~q~~~~ 42 (180)
T d1ej0a_ 21 KPGMTVVDLGAAPGGWSQYVVT 42 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHH
T ss_pred CCCCeEEEEeccCCcceEEEEe
Confidence 4567899999999999876654
|
| >d2ifta1 c.66.1.46 (A:11-193) Putative methylase HI0767 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Putative methylase HI0767 species: Haemophilus influenzae [TaxId: 727]
Probab=91.92 E-value=0.2 Score=41.49 Aligned_cols=72 Identities=14% Similarity=0.038 Sum_probs=43.6
Q ss_pred eEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc---cc--cceeeccC
Q 017702 64 FKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH---AR--KYFAAGLP 138 (367)
Q Consensus 64 ~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~---~~--~~f~~gvp 138 (367)
.+|+|+-||||..++..++ . -+ . +|+|-|.-..-++.+-+++.. .. .......-
T Consensus 45 ~~vLDlFaGsG~~glEalS------------R-----GA---~-~v~fVE~~~~a~~~ik~Ni~~l~~~~~~~~~~~~d~ 103 (183)
T d2ifta1 45 SECLDGFAGSGSLGFEALS------------R-----QA---K-KVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSS 103 (183)
T ss_dssp CEEEETTCTTCHHHHHHHH------------T-----TC---S-EEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCH
T ss_pred ceEeecccCccceeeeeee------------e-----cc---e-eeEEeecccchhhhHhhHHhhhcccccccccccccc
Confidence 5899999999999997762 1 12 3 678877776666555555321 11 11222222
Q ss_pred ccccccCCCCCceeEEEe
Q 017702 139 GSFHSRLFPRSSIHFVHT 156 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S 156 (367)
-.|..+......+|+||.
T Consensus 104 ~~~l~~~~~~~~fDlIFl 121 (183)
T d2ifta1 104 LDFLKQPQNQPHFDVVFL 121 (183)
T ss_dssp HHHTTSCCSSCCEEEEEE
T ss_pred cccccccccCCcccEEEe
Confidence 234455555567899988
|
| >d1qama_ c.66.1.24 (A:) rRNA adenine dimethylase {Bacillus subtilis, Ermc' [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: rRNA adenine dimethylase-like domain: rRNA adenine dimethylase species: Bacillus subtilis, Ermc' [TaxId: 1423]
Probab=91.80 E-value=0.12 Score=44.90 Aligned_cols=22 Identities=32% Similarity=0.259 Sum_probs=19.4
Q ss_pred CCceEEeeecCCCCcccHHHHH
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQ 82 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~ 82 (367)
.+.-+|+|+|||+|..|..+++
T Consensus 20 ~~~d~VlEIGpG~G~LT~~Ll~ 41 (235)
T d1qama_ 20 NEHDNIFEIGSGKGHFTLELVQ 41 (235)
T ss_dssp CTTCEEEEECCTTSHHHHHHHH
T ss_pred CCCCeEEEECCCchHHHHHHHh
Confidence 3568899999999999999986
|
| >d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thermus thermophilus [TaxId: 274]
Probab=91.27 E-value=0.37 Score=43.46 Aligned_cols=114 Identities=12% Similarity=0.158 Sum_probs=62.3
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccch---HHHh----hc-CCccccc
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDF---NTLF----KS-LPHARKY 132 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDF---n~lf----~~-l~~~~~~ 132 (367)
+.+-+|+.+|.|.|.....+++. .| .-+|..-|+-..=. ...| .. +...+--
T Consensus 76 ~~pk~VLiiG~G~G~~~~~ll~~-----------------~~---~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~ 135 (312)
T d1uira_ 76 PEPKRVLIVGGGEGATLREVLKH-----------------PT---VEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAV 135 (312)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-----------------TT---CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEE
T ss_pred CCcceEEEeCCCchHHHHHHHhc-----------------CC---cceEEEecCCHHHHHHHHhcCcccccCccCCCceE
Confidence 45789999999999877766420 11 11344444431100 0111 11 0112223
Q ss_pred eeeccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHH
Q 017702 133 FAAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARA 212 (367)
Q Consensus 133 f~~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra 212 (367)
...+++..|..+ .+..+|+|++-.+=.|....|+.. .|. ..|++..+
T Consensus 136 i~~~Da~~~l~~--~~~~yDvIi~D~~dp~~~~~~~~~------L~t-------------------------~eF~~~~~ 182 (312)
T d1uira_ 136 LVIDDARAYLER--TEERYDVVIIDLTDPVGEDNPARL------LYT-------------------------VEFYRLVK 182 (312)
T ss_dssp EEESCHHHHHHH--CCCCEEEEEEECCCCBSTTCGGGG------GSS-------------------------HHHHHHHH
T ss_pred EEEchHHHHhhh--cCCcccEEEEeCCCcccccchhhh------hhh-------------------------HHHHHHHH
Confidence 455666666554 346899999744333332222110 011 24888999
Q ss_pred HhhccCceEEEEeec
Q 017702 213 EELVPGGLMVLILAA 227 (367)
Q Consensus 213 ~EL~pGG~lvl~~~g 227 (367)
+-|+|||.|++...+
T Consensus 183 ~~L~p~Gvlv~~~~s 197 (312)
T d1uira_ 183 AHLNPGGVMGMQTGM 197 (312)
T ss_dssp HTEEEEEEEEEEEEE
T ss_pred HhcCCCceEEEecCC
Confidence 999999999987754
|
| >d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: COMT-like domain: Caffeoyl-CoA O-methyltransferase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=91.03 E-value=0.061 Score=46.67 Aligned_cols=76 Identities=13% Similarity=0.131 Sum_probs=43.7
Q ss_pred CceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCcc---chHHHhhcCCc-cccceeecc
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDN---DFNTLFKSLPH-ARKYFAAGL 137 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~N---DFn~lf~~l~~-~~~~f~~gv 137 (367)
++-+|+|+|+++|..|+.++..+ + + .-+++--|...+ -....|+.... .+--+..|.
T Consensus 59 ~~k~iLEiGT~~GyStl~la~al--------~--------~---~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g~ 119 (227)
T d1susa1 59 NAKNTMEIGVYTGYSLLATALAI--------P--------E---DGKILAMDINKENYELGLPVIKKAGVDHKIDFREGP 119 (227)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHS--------C--------T---TCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESC
T ss_pred CCCcEEEecchhhhhHHHHHhhC--------C--------C---CcEEEEEeccchhHHHHHHHHHHhccccceeeeehH
Confidence 46799999999999999987554 1 1 113444444321 12223332221 223355566
Q ss_pred CccccccCCC----CCceeEEEe
Q 017702 138 PGSFHSRLFP----RSSIHFVHT 156 (367)
Q Consensus 138 p~SFy~~l~P----~~svd~~~S 156 (367)
......++.. .+++||+|-
T Consensus 120 a~~~L~~l~~~~~~~~~fD~iFi 142 (227)
T d1susa1 120 ALPVLDEMIKDEKNHGSYDFIFV 142 (227)
T ss_dssp HHHHHHHHHHCGGGTTCBSEEEE
T ss_pred HHHHHHHHHhccccCCceeEEEe
Confidence 5566666643 357899887
|
| >d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: COMT-like domain: COMT domain-containing protein 1, COMTD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.62 E-value=0.076 Score=45.72 Aligned_cols=23 Identities=26% Similarity=0.281 Sum_probs=19.3
Q ss_pred CceEEeeecCCCCcccHHHHHHH
Q 017702 62 KPFKIADLGCSVGPNTLLAVQNI 84 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~~i 84 (367)
++-+|+|+||++|.-|+.++..+
T Consensus 59 ~~k~vLEiGt~~GyStl~~a~al 81 (219)
T d2avda1 59 QAKKALDLGTFTGYSALALALAL 81 (219)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTS
T ss_pred CCCeEEEEechhhHHHHHHHHhC
Confidence 46799999999999999887433
|
| >d1g60a_ c.66.1.11 (A:) Methyltransferase mboII {Moraxella bovis [TaxId: 476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Type II DNA methylase domain: Methyltransferase mboII species: Moraxella bovis [TaxId: 476]
Probab=88.48 E-value=0.75 Score=38.77 Aligned_cols=56 Identities=9% Similarity=0.166 Sum_probs=34.4
Q ss_pred CCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccCceEEEEe
Q 017702 146 FPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPGGLMVLIL 225 (367)
Q Consensus 146 ~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~ 225 (367)
+|++|||++++ +|.||-|+-+...... .+.| ...+..+++...+-|+|||.+++..
T Consensus 19 lpd~sVdliit------------------dPPY~~~~~~~d~~~~--~~~y----~~~~~~~~~e~~rvLk~~g~~~~~~ 74 (256)
T d1g60a_ 19 VENKSVQLAVI------------------DPPYNLSKADWDSFDS--HNEF----LAFTYRWIDKVLDKLDKDGSLYIFN 74 (256)
T ss_dssp SCTTCEEEEEE------------------CCCCSSCSSGGGCCSS--HHHH----HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcCCCcCEEEE------------------CCCCCCCcCcCcCCCC--HHHH----HHHHHHHHHHhhhccccCccccccc
Confidence 46789999998 3446655433322111 1223 3355567777888999999876544
|
| >d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Putative spermidine synthetase PF0127 (SpeE) species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=87.37 E-value=1.1 Score=39.22 Aligned_cols=22 Identities=18% Similarity=0.197 Sum_probs=19.0
Q ss_pred HHHHHHHHhhccCceEEEEeec
Q 017702 206 SFLNARAEELVPGGLMVLILAA 227 (367)
Q Consensus 206 ~fL~~Ra~EL~pGG~lvl~~~g 227 (367)
.|++..++-|+|||.+++....
T Consensus 171 eF~~~~~~~L~~~Gv~v~q~~s 192 (276)
T d1mjfa_ 171 EFYRYVYDALNNPGIYVTQAGS 192 (276)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEE
T ss_pred HHHHhhHhhcCCCceEEEecCC
Confidence 5889999999999999888754
|
| >d2okca1 c.66.1.45 (A:9-433) Type I restriction enzyme StySJI M protein {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N-6 DNA Methylase-like domain: Type I restriction enzyme StySJI M protein species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=87.07 E-value=4.3 Score=37.27 Aligned_cols=22 Identities=27% Similarity=0.400 Sum_probs=20.0
Q ss_pred HHHHHHHHhhccCceEEEEeec
Q 017702 206 SFLNARAEELVPGGLMVLILAA 227 (367)
Q Consensus 206 ~fL~~Ra~EL~pGG~lvl~~~g 227 (367)
.|+.+..+-|++||++++.++.
T Consensus 279 ~Fi~~~~~~Lk~~G~~~iI~p~ 300 (425)
T d2okca1 279 NFLQHMMLMLKTGGRAAVVLPD 300 (425)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEH
T ss_pred HHHHHHHHhcCCCCeEEEEech
Confidence 4999999999999999999985
|
| >d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: NOL1/NOP2/sun domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=86.30 E-value=1.8 Score=38.03 Aligned_cols=130 Identities=16% Similarity=0.191 Sum_probs=76.3
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc--cccceeeccC
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH--ARKYFAAGLP 138 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~--~~~~f~~gvp 138 (367)
....+|+|+-+|.|.-|..+.+.. . .-.|+-+|...+-...+-+.+.. ...+.+...
T Consensus 101 ~~g~~vLD~CAaPGgKt~~la~l~---------~-----------~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~- 159 (284)
T d1sqga2 101 QNGEHILDLCAAPGGKTTHILEVA---------P-----------EAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGD- 159 (284)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHC---------T-----------TCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECC-
T ss_pred cccceeEeccCccccchhhhhhhh---------h-----------hhhhhhhhcchhhhhhHhhhhhcccccceeeecc-
Confidence 345799999999999999876421 1 22588999987777666665432 122322222
Q ss_pred ccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccC
Q 017702 139 GSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPG 218 (367)
Q Consensus 139 ~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 218 (367)
........++..+|.|.. ++||.-...... +. .+.....+.... ...+--..+|.+-++-|+||
T Consensus 160 ~~~~~~~~~~~~fd~IL~--------DaPCSg~G~~rr--~p-~~~~~~~~~~~~-----~l~~lQ~~iL~~a~~~lk~g 223 (284)
T d1sqga2 160 GRYPSQWCGEQQFDRILL--------DAPCSATGVIRR--HP-DIKWLRRDRDIP-----ELAQLQSEILDAIWPHLKTG 223 (284)
T ss_dssp TTCTHHHHTTCCEEEEEE--------ECCCCCGGGTTT--CT-THHHHCCTTHHH-----HHHHHHHHHHHHHGGGEEEE
T ss_pred ccccchhcccccccEEEE--------eccccccCcccc--cc-chhhccccchhh-----HHHHHHHHHHHHHHHhcCCC
Confidence 222334445678888876 677754321100 00 021111222222 23333446888888889999
Q ss_pred ceEEEEeec
Q 017702 219 GLMVLILAA 227 (367)
Q Consensus 219 G~lvl~~~g 227 (367)
|+||-++..
T Consensus 224 G~lvYsTCS 232 (284)
T d1sqga2 224 GTLVYATCS 232 (284)
T ss_dssp EEEEEEESC
T ss_pred ceEEEeeec
Confidence 999999886
|
| >d1qyra_ c.66.1.24 (A:) High level kasugamycin resistance protein KsgA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: rRNA adenine dimethylase-like domain: High level kasugamycin resistance protein KsgA species: Escherichia coli [TaxId: 562]
Probab=86.28 E-value=0.37 Score=42.15 Aligned_cols=54 Identities=13% Similarity=0.210 Sum_probs=38.9
Q ss_pred CceEEeeecCCCCcccHHHHH------------HHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhh
Q 017702 62 KPFKIADLGCSVGPNTLLAVQ------------NIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFK 124 (367)
Q Consensus 62 ~~~~IaD~GCs~G~nT~~~~~------------~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~ 124 (367)
+.-.|+|+|||.|..|..+++ .+++.+++++.. .+ .+.++..|--.-|+..+..
T Consensus 21 ~~d~vlEIGpG~G~LT~~Ll~~~~~v~aiEiD~~l~~~L~~~~~~------~~---~~~ii~~D~l~~~~~~~~~ 86 (252)
T d1qyra_ 21 KGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFL------GP---KLTIYQQDAMTFNFGELAE 86 (252)
T ss_dssp TTCCEEEECCTTTTTHHHHHTTCSCEEEECCCHHHHHHHHTCTTT------GG---GEEEECSCGGGCCHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHccCCceEEEEeccchhHHHHHHhhh------cc---chhHHhhhhhhhccccccc
Confidence 356789999999999999987 555666553322 23 6788888887777766553
|
| >d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thermotoga maritima [TaxId: 2336]
Probab=84.94 E-value=1.8 Score=38.35 Aligned_cols=112 Identities=11% Similarity=0.097 Sum_probs=60.9
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCcc--ch-HHHhhc----CCccccce
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDN--DF-NTLFKS----LPHARKYF 133 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~N--DF-n~lf~~----l~~~~~~f 133 (367)
+.+-+|+=+|.|.|.....++. . .| .-++..-|+-.. +. ...|.. +...+--.
T Consensus 88 ~~pk~VLiiGgG~G~~~r~~l~-----------~------~~---~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v 147 (295)
T d1inla_ 88 PNPKKVLIIGGGDGGTLREVLK-----------H------DS---VEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEI 147 (295)
T ss_dssp SSCCEEEEEECTTCHHHHHHTT-----------S------TT---CSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEE
T ss_pred CCCceEEEecCCchHHHHHHHh-----------c------CC---CceEEEecCCHHHHHHHHHHHHhhcccccCCCcEE
Confidence 4578999999999976655541 0 12 124555555421 10 011111 11223345
Q ss_pred eeccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHH
Q 017702 134 AAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAE 213 (367)
Q Consensus 134 ~~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~ 213 (367)
..+++..|.++ .++.+|+|+.-..-.|.. | ....|. ..|++..++
T Consensus 148 ~~~Da~~~l~~--~~~~yDvIi~D~~dp~~~--~------~~~L~t-------------------------~efy~~~~~ 192 (295)
T d1inla_ 148 VIANGAEYVRK--FKNEFDVIIIDSTDPTAG--Q------GGHLFT-------------------------EEFYQACYD 192 (295)
T ss_dssp EESCHHHHGGG--CSSCEEEEEEEC------------------CCS-------------------------HHHHHHHHH
T ss_pred EhhhHHHHHhc--CCCCCCEEEEcCCCCCcC--c------hhhhcc-------------------------HHHHHHHHh
Confidence 56666677665 346789998743333311 1 011111 258999999
Q ss_pred hhccCceEEEEeec
Q 017702 214 ELVPGGLMVLILAA 227 (367)
Q Consensus 214 EL~pGG~lvl~~~g 227 (367)
-|+|||.+++...+
T Consensus 193 ~L~~~Gi~v~q~~s 206 (295)
T d1inla_ 193 ALKEDGVFSAETED 206 (295)
T ss_dssp HEEEEEEEEEECCC
T ss_pred hcCCCcEEEEecCC
Confidence 99999999887654
|
| >d1yuba_ c.66.1.24 (A:) rRNA adenine dimethylase {Streptococcus pneumoniae, Ermam [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: rRNA adenine dimethylase-like domain: rRNA adenine dimethylase species: Streptococcus pneumoniae, Ermam [TaxId: 1313]
Probab=84.49 E-value=0.37 Score=41.94 Aligned_cols=22 Identities=14% Similarity=0.123 Sum_probs=18.9
Q ss_pred CCceEEeeecCCCCcccHHHHH
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQ 82 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~ 82 (367)
...-+|+|+|||+|..|..+++
T Consensus 28 ~~~d~VLEIGpG~G~LT~~L~~ 49 (245)
T d1yuba_ 28 KETDTVYEIGTGKGHLTTKLAK 49 (245)
T ss_dssp CSSEEEEECSCCCSSCSHHHHH
T ss_pred CCCCeEEEECCCccHHHHHHHh
Confidence 3568999999999999998873
|
| >d1ixka_ c.66.1.38 (A:) Hypothetical methyltransferase PH1374 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: NOL1/NOP2/sun domain: Hypothetical methyltransferase PH1374 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=83.84 E-value=1.8 Score=38.53 Aligned_cols=126 Identities=13% Similarity=0.111 Sum_probs=69.3
Q ss_pred ceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCccchHHHhhcCCc---cccceeeccCc
Q 017702 63 PFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDNDFNTLFKSLPH---ARKYFAAGLPG 139 (367)
Q Consensus 63 ~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~NDFn~lf~~l~~---~~~~f~~gvp~ 139 (367)
-.+|+|+-||.|.=|..+.+.. .. .-.++.+|.-.+-...+-+.+.. .+-.......
T Consensus 117 g~~vlD~CAapGgKt~~l~~~~----------------~~---~~~i~a~d~~~~r~~~l~~~~~r~~~~~i~~~~~d~- 176 (313)
T d1ixka_ 117 GEIVADMAAAPGGKTSYLAQLM----------------RN---DGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSS- 176 (313)
T ss_dssp TCEEEECCSSCSHHHHHHHHHT----------------TT---CSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCG-
T ss_pred cceeeecccchhhhhHhhhhhc----------------cc---ccceeeeccCHHHHHHHHHHHHHHHhhccccccccc-
Confidence 3689999999999998876433 11 33688888876554444433321 1112222221
Q ss_pred cccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCc-ccccCCCHHHHHHHHHHHHhhHHHHHHHHHHhhccC
Q 017702 140 SFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGS-IQCSESNIEVVRAYSTQYKNDMESFLNARAEELVPG 218 (367)
Q Consensus 140 SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~-i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 218 (367)
..--.....+|.|.. ++||.-... +++.- +... ..++..+ ...+--..+|..-++-|+||
T Consensus 177 --~~~~~~~~~fD~ILv--------DaPCSg~G~----~~r~p~~~~~-~~~~~~~----~l~~~Q~~iL~~a~~~lk~g 237 (313)
T d1ixka_ 177 --LHIGELNVEFDKILL--------DAPCTGSGT----IHKNPERKWN-RTMDDIK----FCQGLQMRLLEKGLEVLKPG 237 (313)
T ss_dssp --GGGGGGCCCEEEEEE--------ECCTTSTTT----CC---------CCHHHHH----HHHHHHHHHHHHHHHHEEEE
T ss_pred --cccccccccccEEEE--------ccccccCCc----eeeccchhhh-hhhhHHH----HHHHHHHHHHHhhhheeCCC
Confidence 111123456787755 677764331 11110 1111 1222222 23334447889999999999
Q ss_pred ceEEEEeec
Q 017702 219 GLMVLILAA 227 (367)
Q Consensus 219 G~lvl~~~g 227 (367)
|+||-++..
T Consensus 238 G~lVYsTCS 246 (313)
T d1ixka_ 238 GILVYSTCS 246 (313)
T ss_dssp EEEEEEESC
T ss_pred cEEEEeecc
Confidence 999998876
|
| >d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Bacillus subtilis [TaxId: 1423]
Probab=82.39 E-value=3.8 Score=35.64 Aligned_cols=111 Identities=12% Similarity=0.081 Sum_probs=65.0
Q ss_pred CCceEEeeecCCCCcccHHHHHHHHHHHHHHHHhccCCCCCCCcceeEEEEcCCCcc--ch-HHHh----hcCCccccce
Q 017702 61 LKPFKIADLGCSVGPNTLLAVQNIIEAIELKFQRTTNLHQKPSALEFQVFLNDHSDN--DF-NTLF----KSLPHARKYF 133 (367)
Q Consensus 61 ~~~~~IaD~GCs~G~nT~~~~~~ii~~i~~~~~~~~~~~~~p~~~e~~v~~nDlp~N--DF-n~lf----~~l~~~~~~f 133 (367)
+.+-+|+-+|=|.|.....++.. .+ .-++..-|+-.. +. ...| ..+...+--.
T Consensus 74 ~~p~~vLiiGgG~G~~~~~~l~~-----------------~~---~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i 133 (274)
T d1iy9a_ 74 PNPEHVLVVGGGDGGVIREILKH-----------------PS---VKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDV 133 (274)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTC-----------------TT---CSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEE
T ss_pred CCcceEEecCCCCcHHHHHHHhc-----------------CC---cceEEEecCCHHHHHHHHHhChhhcccccCCCeEE
Confidence 45689999999999887766520 11 113444444311 11 1111 1122333446
Q ss_pred eeccCccccccCCCCCceeEEEeccccccccCCCccccCCCCCCCCCCcccccCCCHHHHHHHHHHHHhhHHHHHHHHHH
Q 017702 134 AAGLPGSFHSRLFPRSSIHFVHTSYALHWLSKVPKEIVDPCSPAWNKGSIQCSESNIEVVRAYSTQYKNDMESFLNARAE 213 (367)
Q Consensus 134 ~~gvp~SFy~~l~P~~svd~~~S~~alhWLs~~P~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~ 213 (367)
..+++..|..+ .++.+|+|++-.+-.+- .| ...|.+ .|++...+
T Consensus 134 ~~~D~~~~l~~--~~~~yDvIi~D~~~p~~--~~-------~~L~t~-------------------------eFy~~~~~ 177 (274)
T d1iy9a_ 134 QVDDGFMHIAK--SENQYDVIMVDSTEPVG--PA-------VNLFTK-------------------------GFYAGIAK 177 (274)
T ss_dssp EESCSHHHHHT--CCSCEEEEEESCSSCCS--CC-------CCCSTT-------------------------HHHHHHHH
T ss_pred EechHHHHHhh--cCCCCCEEEEcCCCCCC--cc-------hhhccH-------------------------HHHHHHHh
Confidence 66777777766 36789999985433220 11 112222 48999999
Q ss_pred hhccCceEEEEeec
Q 017702 214 ELVPGGLMVLILAA 227 (367)
Q Consensus 214 EL~pGG~lvl~~~g 227 (367)
-|+|||.++.....
T Consensus 178 ~L~~~Gv~v~q~~s 191 (274)
T d1iy9a_ 178 ALKEDGIFVAQTDN 191 (274)
T ss_dssp HEEEEEEEEEECCC
T ss_pred hcCCCceEEEecCC
Confidence 99999999887543
|
| >d1eg2a_ c.66.1.11 (A:) m.RsrI N6 adenosine-specific DNA methyltransferase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Type II DNA methylase domain: m.RsrI N6 adenosine-specific DNA methyltransferase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=80.58 E-value=2.4 Score=35.90 Aligned_cols=25 Identities=16% Similarity=0.210 Sum_probs=18.3
Q ss_pred hHHHHHHHHHHhhccCceEEEEeec
Q 017702 203 DMESFLNARAEELVPGGLMVLILAA 227 (367)
Q Consensus 203 D~~~fL~~Ra~EL~pGG~lvl~~~g 227 (367)
.+..++....+-|+|||.+++....
T Consensus 49 ~~~~~~~e~~rvLk~~G~~~~~~~~ 73 (279)
T d1eg2a_ 49 WAKRWLAEAERVLSPTGSIAIFGGL 73 (279)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred HHHHHHHHHHHHhCCCccEEEecCc
Confidence 3455566666779999999987654
|