Citrus Sinensis ID: 017715

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------
MAKDKKRNDQISKEKKKKGLGRGLWSVWAVIVVLFATAAVTTRTGSKIALFANNQTSCHCSSSSQDSVKYTGMVEDCCCDYETVDSVNGEVLHPLLQQLVTTPFFRYFKAKLWCDCPFWPDDGMCRLRDCSVCECPENEFPEPFKKPFHILPSDDLMCQEGKPEATVDRTLDKRAFRGWIETDNPWTNDDETDNGEMTYVNLLLNPERYTGYTGPSARRIWDAVYTENCPKWMAIVPANPQTRPNPPAKTRPLRWGKNPELMYDRVLRYQDRVRNLYFTFLFVLRAVTKATDYLEQAEYDTGNHEDDLKTVSLMKQLLYNPKLQAACPLPFDEAKLWQGQSGPELKQQIQEQFRNIRFRSEPELIVF
ccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHccHHHHHHHHHccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccEEEEccccccccccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHccccccccccccccc
ccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEcccccccccccccccccccccccEEEccccccHHHHHHHcHHcHHHHHHHHHHcccEEEEEEEcccccccccccccccccccccccccHHcccccccHHHHcccccccccccccccccccccccHHHHHHHHHccccccccccccccccEEEEccccccHccccccccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHccccHHHHHHHHHHHHccEEEccccEEEEc
makdkkrndQISKEKkkkglgrgLWSVWAVIVVLFATAAVTTRTGSKIALfannqtschcssssqdsvkytgmvedcccdyetvdsvngevlHPLLQQLVTTPFFRYFKAklwcdcpfwpddgmcrlrdcsvcecpenefpepfkkpfhilpsddlmcqegkpeatvdrtldKRAFRgwietdnpwtnddetdngeMTYVNLLlnperytgytgpsarrIWDAVYtencpkwmaivpanpqtrpnppaktrplrwgknpelMYDRVLRYQDRVRNLYFTFLFVLRAVTKATDYleqaeydtgnheddLKTVSLMKQLlynpklqaacplpfdeaklwqgqsgpeLKQQIQEQFRNirfrsepelivf
makdkkrndqiskekkkkglgrglwSVWAVIVVLFATAAVTTRTGSKIALFANNQTSCHCSSSSQDSVKYTGMVEDCCCDYETVDSVNGEVLHPLLQQLVTTPFFRYFKAKLWCDCPFWPDDGMCRLRDCSVCECPENEFPEPFKKPFHILPSDDLMCQEGKPeatvdrtldkrafrgwietdnpwtnddetdnGEMTYVNLLLNPERYTGYTGPSARRIWDAVYTENCPKWMAivpanpqtrpnppaktrplrwgknpeLMYDRVLRYQDRVRNLYFTFLFVLRAVTKATDYLEqaeydtgnhedDLKTVSLMKQLLYNPKLQAACPLPFDEAKLWQGQSGPELKQQIQEQfrnirfrsepelivf
MAKDKKRNDQISkekkkkGLGRGLWSVWAVIVVLFATAAVTTRTGSKIALFANNQTschcssssqdsVKYTGMVEDCCCDYETVDSVNGEVLHPLLQQLVTTPFFRYFKAKLWCDCPFWPDDGMCRLRDCSVcecpenefpepfkkpfHILPSDDLMCQEGKPEATVDRTLDKRAFRGWIETDNPWTNDDETDNGEMTYVNLLLNPERYTGYTGPSARRIWDAVYTENCPKWMAIVPANPQTRPNPPAKTRPLRWGKNPELMYDRVLRYQDRVRNLYFTFLFVLRAVTKATDYLEQAEYDTGNHEDDLKTVSLMKQLLYNPKLQAACPLPFDEAKLWQGQSGPELKQQIQEQFRNIRFRSEPELIVF
*******************LGRGLWSVWAVIVVLFATAAVTTRTGSKIALFANNQTSCHCS****DSVKYTGMVEDCCCDYETVDSVNGEVLHPLLQQLVTTPFFRYFKAKLWCDCPFWPDDGMCRLRDCSVCECPENEFPEPFKKPFHILPSDDLMC********VDRTLDKRAFRGWIETDNPWTNDDETDNGEMTYVNLLLNPERYTGYTGPSARRIWDAVYTENCPKWMAIVP****************RWGKNPELMYDRVLRYQDRVRNLYFTFLFVLRAVTKATDYLEQAEYDTGNHEDDLKTVSLMKQLLYNPKLQAACPLPFDEAKLWQ*****************************
************************WSVWAVIVVLFATAAVTTRTGSKI***********CS**S*DSVKYTGMVEDCCCDYETVDSVNGEVLHPLLQQLVTTPFFRYFKAKLWCDCPFWPDDGMCRLRDCSVCECPENEFPEPFK*****************************AFRGWIETDNPWTNDDETDNGEMTYVNLLLNPERY**YTGPSARRIWDAVYTENC**********************PLRWGKNPELMYDRVLRYQDRVRNLYFTFLFVLRAVTKATDYLEQAEYDTGNHEDDLKTVSLMKQLLYNPKLQAACPLPFDEAKLWQGQSGPELKQQIQEQFRNIRFRSEPELIVF
********************GRGLWSVWAVIVVLFATAAVTTRTGSKIALFANNQ*************KYTGMVEDCCCDYETVDSVNGEVLHPLLQQLVTTPFFRYFKAKLWCDCPFWPDDGMCRLRDCSVCECPENEFPEPFKKPFHILPSDDLMCQEGKPEATVDRTLDKRAFRGWIETDNPWTNDDETDNGEMTYVNLLLNPERYTGYTGPSARRIWDAVYTENCPKWMAIVPANPQTRPNPPAKTRPLRWGKNPELMYDRVLRYQDRVRNLYFTFLFVLRAVTKATDYLEQAEYDTGNHEDDLKTVSLMKQLLYNPKLQAACPLPFDEAKLWQGQSGPELKQQIQEQFRNIRFRSEPELIVF
**********ISKEKKKKGLGRGLWSVWAVIVVLFATAAVTTRTGSKIALF*NNQTSCHCSSSSQDSVKYTGMVEDCCCDYETVDSVNGEVLHPLLQQLVTTPFFRYFKAKLWCDCPFWPDDGMCRLRDCSVCECPENEFPEPFKKPFHILPSDDLMCQEGKPEATVDRTLDKRAFRGWIETDNPWTNDDETDNGEMTYVNLLLNPERYTGYTGPSARRIWDAVYTENCPKWMAIVPANPQTRPNPPAKTRPLRWGKNPELMYDRVLRYQDRVRNLYFTFLFVLRAVTKATDYLEQAEYDTGNHEDDLKTVSLMKQLLYNPKLQAACPLPFDEAKLWQGQSGPELKQQIQEQFRNIRFRSEPELIVF
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAKDKKRNDQISKEKKKKGLGRGLWSVWAVIVVLFATAAVTTRTGSKIALFANNQTSCHCSSSSQDSVKYTGMVEDCCCDYETVDSVNGEVLHPLLQQLVTTPFFRYFKAKLWCDCPFWPDDGMCRLRDCSVCECPENEFPEPFKKPFHILPSDDLMCQEGKPEATVDRTLDKRAFRGWIETDNPWTNDDETDNGEMTYVNLLLNPERYTGYTGPSARRIWDAVYTENCPKWMAIVPANPQTRPNPPAKTRPLRWGKNPELMYDRVLRYQDRVRNLYFTFLFVLRAVTKATDYLEQAEYDTGNHEDDLKTVSLMKQLLYNPKLQAACPLPFDEAKLWQGQSGPELKQQIQEQFRNIRFRSEPELIVF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query367 2.2.26 [Sep-21-2011]
Q9C7S7469 Endoplasmic oxidoreductin yes no 0.855 0.669 0.697 1e-137
Q7X9I4472 Endoplasmic oxidoreductin no no 0.801 0.622 0.667 1e-120
Q6DD71465 ERO1-like protein alpha O N/A no 0.765 0.604 0.325 1e-36
A5PJN2468 ERO1-like protein alpha O yes no 0.771 0.604 0.312 5e-36
B6CVD7468 ERO1-like protein alpha O yes no 0.866 0.679 0.288 5e-36
Q8R4A1464 ERO1-like protein alpha O yes no 0.771 0.609 0.304 1e-35
Q96HE7468 ERO1-like protein alpha O yes no 0.771 0.604 0.312 1e-35
Q7T3D1 489 ERO1-like protein alpha O yes no 0.844 0.633 0.297 2e-35
Q8R180464 ERO1-like protein alpha O yes no 0.771 0.609 0.304 2e-35
B1H1F9474 ERO1-like protein alpha O no no 0.822 0.637 0.305 3e-34
>sp|Q9C7S7|ERO1_ARATH Endoplasmic oxidoreductin-1 OS=Arabidopsis thaliana GN=AERO1 PE=1 SV=1 Back     alignment and function desciption
 Score =  488 bits (1255), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 233/334 (69%), Positives = 271/334 (81%), Gaps = 20/334 (5%)

Query: 41  TTRTGSKIALFANNQTSCHCSSSSQDSVKYTGMVEDCCCDYETVDSVNGEVLHPLLQQLV 100
           ++RT S +  F +++ SC CS   Q + KY GM+EDCCCDYETVD++N EVL+PLLQ LV
Sbjct: 35  SSRTNSNVGFFFSDRNSCSCSL--QKTGKYKGMIEDCCCDYETVDNLNTEVLNPLLQDLV 92

Query: 101 TTPFFRYFKAKLWCDCPFWPDDGMCRLRDCSVCECPENEFPEPFKKPFH-ILPSDDLMCQ 159
           TTPFFRY+K KLWCDCPFWPDDGMCRLRDCSVCECPENEFPEPFKKPF   LPSDDL CQ
Sbjct: 93  TTPFFRYYKVKLWCDCPFWPDDGMCRLRDCSVCECPENEFPEPFKKPFVPGLPSDDLKCQ 152

Query: 160 EGKPEATVDRTLDKRAFRGWIETDNPWTNDDETDNGEMTYVNLLLNPERYTGYTGPSARR 219
           EGKP+  VDRT+D RAFRGW+ET NPWT+DD+TD+GEM+YVNL LNPERYTGYTGPSARR
Sbjct: 153 EGKPQGAVDRTIDNRAFRGWVETKNPWTHDDDTDSGEMSYVNLQLNPERYTGYTGPSARR 212

Query: 220 IWDAVYTENCPKWMA------------IVPANPQTRPNPPAKTRPL-----RWGKNPELM 262
           IWD++Y+ENCPK+ +            ++     +     A    L     +WG+N ELM
Sbjct: 213 IWDSIYSENCPKYSSGETCPEKKVLYKLISGLHSSISMHIAADYLLDESRNQWGQNIELM 272

Query: 263 YDRVLRYQDRVRNLYFTFLFVLRAVTKATDYLEQAEYDTGNHEDDLKTVSLMKQLLYNPK 322
           YDR+LR+ DRVRN+YFT+LFVLRAVTKAT YLEQAEYDTGNH +DLKT SL+KQLLY+PK
Sbjct: 273 YDRILRHPDRVRNMYFTYLFVLRAVTKATAYLEQAEYDTGNHAEDLKTQSLIKQLLYSPK 332

Query: 323 LQAACPLPFDEAKLWQGQSGPELKQQIQEQFRNI 356
           LQ ACP+PFDEAKLWQGQSGPELKQQIQ+QFRNI
Sbjct: 333 LQTACPVPFDEAKLWQGQSGPELKQQIQKQFRNI 366
Essential oxidoreductase that oxidizes proteins in the endoplasmic reticulum to produce disulfide bonds. Acts by oxidizing directly PDI isomerase through a direct disulfide exchange. Does not act as a direct oxidant of folding substrate, but relies on PDI to transfer oxidizing equivalent. Does not oxidize all PDI related proteins, suggesting that it can discriminate between PDI and related proteins. Its reoxidation probably involves electron transfer to molecular oxygen via FAD. Acts independently of glutathione. May be responsible for a significant proportion of reactive oxygen species (ROS) in the cell, thereby being a source of oxidative stress.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 8EC: .EC: 4EC: .EC: -
>sp|Q7X9I4|ERO2_ARATH Endoplasmic oxidoreductin-2 OS=Arabidopsis thaliana GN=AERO2 PE=1 SV=1 Back     alignment and function description
>sp|Q6DD71|ERO1A_XENLA ERO1-like protein alpha OS=Xenopus laevis GN=ero1l PE=2 SV=1 Back     alignment and function description
>sp|A5PJN2|ERO1A_BOVIN ERO1-like protein alpha OS=Bos taurus GN=ERO1L PE=2 SV=1 Back     alignment and function description
>sp|B6CVD7|ERO1A_PIG ERO1-like protein alpha OS=Sus scrofa GN=ERO1L PE=2 SV=1 Back     alignment and function description
>sp|Q8R4A1|ERO1A_RAT ERO1-like protein alpha OS=Rattus norvegicus GN=Ero1l PE=1 SV=1 Back     alignment and function description
>sp|Q96HE7|ERO1A_HUMAN ERO1-like protein alpha OS=Homo sapiens GN=ERO1L PE=1 SV=2 Back     alignment and function description
>sp|Q7T3D1|ERO1A_DANRE ERO1-like protein alpha OS=Danio rerio GN=ero1l PE=2 SV=1 Back     alignment and function description
>sp|Q8R180|ERO1A_MOUSE ERO1-like protein alpha OS=Mus musculus GN=Ero1l PE=1 SV=2 Back     alignment and function description
>sp|B1H1F9|ERO1A_XENTR ERO1-like protein alpha OS=Xenopus tropicalis GN=ero1l PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query367
224056607 481 predicted protein [Populus trichocarpa] 0.931 0.711 0.697 1e-145
224115326 470 predicted protein [Populus trichocarpa] 0.950 0.742 0.689 1e-145
297841969 469 hypothetical protein ARALYDRAFT_476357 [ 0.855 0.669 0.703 1e-136
356530543465 PREDICTED: endoplasmic oxidoreductin-2-l 0.929 0.733 0.673 1e-136
359483898 487 PREDICTED: endoplasmic oxidoreductin-1-l 0.888 0.669 0.671 1e-135
297740752 499 unnamed protein product [Vitis vinifera] 0.888 0.653 0.671 1e-135
15218421 469 endoplasmic oxidoreductin-1 [Arabidopsis 0.855 0.669 0.697 1e-135
356556515465 PREDICTED: endoplasmic oxidoreductin-2-l 0.929 0.733 0.665 1e-134
449530012458 PREDICTED: endoplasmic oxidoreductin-1-l 0.880 0.705 0.682 1e-134
449433609 469 PREDICTED: endoplasmic oxidoreductin-1-l 0.880 0.688 0.682 1e-134
>gi|224056607|ref|XP_002298934.1| predicted protein [Populus trichocarpa] gi|222846192|gb|EEE83739.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  520 bits (1338), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 258/370 (69%), Positives = 288/370 (77%), Gaps = 28/370 (7%)

Query: 13  KEKKKKGLGRGLWSVW-------AVIVVLFATAAVTTRTGSKI-ALFANNQTSCHCSSSS 64
           K K++    R  WS W       AV++ + A   V+    SKI +L ++N  SC CSS+ 
Sbjct: 9   KPKQENKKERRKWSSWWLIGASLAVVLAVIAAGTVSPMNASKIGSLISSNYKSCQCSSAQ 68

Query: 65  QDSVKYTGMVEDCCCDYETVDSVNGEVLHPLLQQLVTTPFFRYFKAKLWCDCPFWPDDGM 124
               KY GM+EDCCCDYE+VDSVNGEVLHPLLQ+LVTTPFFRYFK KLWCDCPFWPDDGM
Sbjct: 69  VR--KYKGMIEDCCCDYESVDSVNGEVLHPLLQELVTTPFFRYFKVKLWCDCPFWPDDGM 126

Query: 125 CRLRDCSVCECPENEFPEPFKKPF-HILPSDDLMCQEGKPEATVDRTLDKRAFRGWIETD 183
           CRLRDCSVCECPENEFPEPFKKPF   L +DDLMCQEGKP+A VDRTLD RAFRGWI TD
Sbjct: 127 CRLRDCSVCECPENEFPEPFKKPFRRGLSADDLMCQEGKPQAAVDRTLDSRAFRGWIVTD 186

Query: 184 NPWTNDDETDNGEMTYVNLLLNPERYTGYTGPSARRIWDAVYTENCPKWMA--------- 234
           NPWTNDDETDNGE+TYVNLLLNPERYTGY G SARRIWDAVY+ENCPK+ +         
Sbjct: 187 NPWTNDDETDNGELTYVNLLLNPERYTGYAGSSARRIWDAVYSENCPKYASGEICQEKKV 246

Query: 235 ---IVPANPQTRPNPPAKTRPL-----RWGKNPELMYDRVLRYQDRVRNLYFTFLFVLRA 286
              ++     +     A    L     +WG+N ELMYDRVLRY DRVRNLYFTFLFVLRA
Sbjct: 247 LYKLISGLHSSISIHIAADYLLDESTNKWGQNLELMYDRVLRYPDRVRNLYFTFLFVLRA 306

Query: 287 VTKATDYLEQAEYDTGNHEDDLKTVSLMKQLLYNPKLQAACPLPFDEAKLWQGQSGPELK 346
           +TKA DYLEQAEYDTGN+ +DLKT SL++QLLYNPKLQAACPLPFDEAKLWQGQSGPELK
Sbjct: 307 MTKAADYLEQAEYDTGNNTEDLKTQSLVRQLLYNPKLQAACPLPFDEAKLWQGQSGPELK 366

Query: 347 QQIQEQFRNI 356
           QQIQ+QFRNI
Sbjct: 367 QQIQKQFRNI 376

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224115326|ref|XP_002317004.1| predicted protein [Populus trichocarpa] gi|222860069|gb|EEE97616.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297841969|ref|XP_002888866.1| hypothetical protein ARALYDRAFT_476357 [Arabidopsis lyrata subsp. lyrata] gi|297334707|gb|EFH65125.1| hypothetical protein ARALYDRAFT_476357 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356530543|ref|XP_003533840.1| PREDICTED: endoplasmic oxidoreductin-2-like [Glycine max] Back     alignment and taxonomy information
>gi|359483898|ref|XP_002271644.2| PREDICTED: endoplasmic oxidoreductin-1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297740752|emb|CBI30934.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|15218421|ref|NP_177372.1| endoplasmic oxidoreductin-1 [Arabidopsis thaliana] gi|50400631|sp|Q9C7S7.1|ERO1_ARATH RecName: Full=Endoplasmic oxidoreductin-1; Flags: Precursor gi|12323665|gb|AAG51798.1|AC067754_14 disulfide bond formation protein, putative; 78451-75984 [Arabidopsis thaliana] gi|31711714|gb|AAP68213.1| At1g72280 [Arabidopsis thaliana] gi|110743908|dbj|BAE99788.1| like disulfide bond formation protein [Arabidopsis thaliana] gi|332197177|gb|AEE35298.1| endoplasmic oxidoreductin-1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356556515|ref|XP_003546570.1| PREDICTED: endoplasmic oxidoreductin-2-like [Glycine max] Back     alignment and taxonomy information
>gi|449530012|ref|XP_004171991.1| PREDICTED: endoplasmic oxidoreductin-1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449433609|ref|XP_004134590.1| PREDICTED: endoplasmic oxidoreductin-1-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query367
TAIR|locus:2207031 469 ERO1 "endoplasmic reticulum ox 0.566 0.443 0.621 5.9e-120
ZFIN|ZDB-GENE-060929-744 488 zgc:153032 "zgc:153032" [Danio 0.460 0.346 0.372 3.8e-40
UNIPROTKB|A5PJN2 468 ERO1L "ERO1-like protein alpha 0.463 0.363 0.370 1.8e-38
UNIPROTKB|Q96HE7 468 ERO1L "ERO1-like protein alpha 0.463 0.363 0.375 6.8e-38
UNIPROTKB|B6CVD7 468 ERO1L "ERO1-like protein alpha 0.463 0.363 0.370 1e-37
UNIPROTKB|E2RNW5 468 ERO1L "Uncharacterized protein 0.463 0.363 0.370 1e-37
RGD|621713 464 Ero1l "ERO1-like (S. cerevisia 0.438 0.346 0.364 1.1e-37
UNIPROTKB|F8WFP9 464 Ero1l "ERO1-like protein alpha 0.438 0.346 0.364 1.1e-37
UNIPROTKB|E1C0W7 463 ERO1L "Uncharacterized protein 0.438 0.347 0.368 1.2e-37
UNIPROTKB|E1C542 463 ERO1L "Uncharacterized protein 0.438 0.347 0.368 1.2e-37
TAIR|locus:2207031 ERO1 "endoplasmic reticulum oxidoreductins 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 732 (262.7 bits), Expect = 5.9e-120, Sum P(2) = 5.9e-120
 Identities = 133/214 (62%), Positives = 157/214 (73%)

Query:    22 RGLWSVW--AVIVVLFATAAVTTRTGSKIALFANNQTXXXXXXXXXXXVKYTGMVEDCCC 79
             R  W  W  A +VV+F   AV++RT S +  F +++             KY GM+EDCCC
Sbjct:    15 RKTWR-WPLATLVVVFLAVAVSSRTNSNVGFFFSDRNSCSCSLQKTG--KYKGMIEDCCC 71

Query:    80 DYETVDSVNGEVLHPLLQQLVTTPFFRYFKAKLWCDCPFWPDDGMCRLRDCSVXXXXXXX 139
             DYETVD++N EVL+PLLQ LVTTPFFRY+K KLWCDCPFWPDDGMCRLRDCSV       
Sbjct:    72 DYETVDNLNTEVLNPLLQDLVTTPFFRYYKVKLWCDCPFWPDDGMCRLRDCSVCECPENE 131

Query:   140 XXXXXXX-XXHILPSDDLMCQEGKPEATVDRTLDKRAFRGWIETDNPWTNDDETDNGEMT 198
                         LPSDDL CQEGKP+  VDRT+D RAFRGW+ET NPWT+DD+TD+GEM+
Sbjct:   132 FPEPFKKPFVPGLPSDDLKCQEGKPQGAVDRTIDNRAFRGWVETKNPWTHDDDTDSGEMS 191

Query:   199 YVNLLLNPERYTGYTGPSARRIWDAVYTENCPKW 232
             YVNL LNPERYTGYTGPSARRIWD++Y+ENCPK+
Sbjct:   192 YVNLQLNPERYTGYTGPSARRIWDSIYSENCPKY 225
GO:0003756 "protein disulfide isomerase activity" evidence=IEA
GO:0005634 "nucleus" evidence=ISM
GO:0005789 "endoplasmic reticulum membrane" evidence=IEA
GO:0016671 "oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor" evidence=IEA
GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0006984 "ER-nucleus signaling pathway" evidence=RCA
GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA
ZFIN|ZDB-GENE-060929-744 zgc:153032 "zgc:153032" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|A5PJN2 ERO1L "ERO1-like protein alpha" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q96HE7 ERO1L "ERO1-like protein alpha" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|B6CVD7 ERO1L "ERO1-like protein alpha" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E2RNW5 ERO1L "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
RGD|621713 Ero1l "ERO1-like (S. cerevisiae)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F8WFP9 Ero1l "ERO1-like protein alpha" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E1C0W7 ERO1L "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E1C542 ERO1L "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9C7S7ERO1_ARATH1, ., 8, ., 4, ., -0.69760.85550.6695yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.8.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.I.5241.1
hypothetical protein (438 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query367
pfam04137348 pfam04137, ERO1, Endoplasmic Reticulum Oxidoreduct 4e-92
COG5061 425 COG5061, ERO1, Oxidoreductin, endoplasmic reticulu 3e-22
>gnl|CDD|217920 pfam04137, ERO1, Endoplasmic Reticulum Oxidoreductin 1 (ERO1) Back     alignment and domain information 
 Score =  279 bits (716), Expect = 4e-92
 Identities = 114/298 (38%), Positives = 159/298 (53%), Gaps = 46/298 (15%)

Query: 90  EVLHPLLQQLVTTPFFRYFKAKLWCDCPFWPDD-GMCRLRDCSVCECPENEFPEPFKKPF 148
           E + PLL  L +T FFRYFK  L  +CPFWPDD G+C  R C+VC C E+E PE +K   
Sbjct: 1   EKIRPLLNSLTSTDFFRYFKVNLDKECPFWPDDNGLCGSRACAVCTCDESEIPEVWKPS- 59

Query: 149 HILPSDDLMCQEGKPEATVDRTLDK-RAFRGWIETDNP--WTNDDETDNGEMTYVNLLLN 205
                +   C+EGK    +D +L   RA   W +TD+   +   D+ D+ +  YV+LLLN
Sbjct: 60  ---ELEGSACKEGKDFGELDCSLSDCRASCKWKDTDDLDDYCVVDDEDSDKGVYVDLLLN 116

Query: 206 PERYTGYTGPSARRIWDAVYTENCPKWMAIVPANPQTRPNPPA----------------- 248
           PER+TGY GPSA RIW A+Y ENC          P  + +                    
Sbjct: 117 PERFTGYKGPSAARIWRAIYEENCF---------PIGKVDNTCCLEKRVFYRLISGLHAS 167

Query: 249 ----------KTRPLRWGKNPELMYDRVLRYQDRVRNLYFTFLFVLRAVTKATDYLEQAE 298
                       +  +WG N EL ++RV  + DR+RNLYFT+  VLRA+ K   YLE   
Sbjct: 168 ISTHLSADYLNDKTGKWGPNLELFFERVGNHPDRLRNLYFTYALVLRALAKLKPYLENFT 227

Query: 299 YDTGNHEDDLKTVSLMKQLLYNPKLQAACPLPFDEAKLWQGQSGPELKQQIQEQFRNI 356
           ++TGN  +D +T  L+K LL   +L ++ P  FDE  L++     +LK++ + +FRNI
Sbjct: 228 FNTGNDLEDTETKLLLKDLLS--ELNSSSPKHFDENLLFKNDEAIKLKEEFRRRFRNI 283

Members of this family are required for the formation of disulphide bonds in the ER. Length = 348
>gnl|CDD|227393 COG5061, ERO1, Oxidoreductin, endoplasmic reticulum membrane-associated protein involved in disulfide bond formation [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 367
KOG2608 469 consensus Endoplasmic reticulum membrane-associate 100.0
PF04137357 ERO1: Endoplasmic Reticulum Oxidoreductin 1 (ERO1) 100.0
COG5061 425 ERO1 Oxidoreductin, endoplasmic reticulum membrane 100.0
>KOG2608 consensus Endoplasmic reticulum membrane-associated oxidoreductin involved in disulfide bond formation [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information 
Probab=100.00  E-value=4.7e-105  Score=792.80  Aligned_cols=322  Identities=43%  Similarity=0.771  Sum_probs=292.0

Q ss_pred             CcchHHHHHHHHHHHHhhhhhcccCCccccccCCCCcccccCCCCCCccccccccCcccchHhHHhhhhhhhhHHHHhhh
Q 017715           21 GRGLWSVWAVIVVLFATAAVTTRTGSKIALFANNQTSCHCSSSSQDSVKYTGMVEDCCCDYETVDSVNGEVLHPLLQQLV  100 (367)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~c~~~~~~~~~~~G~v~Dc~c~~etId~~N~~~l~p~L~~Lv  100 (367)
                      +||.|+++.+.++.+++ .++       +.|..  +.|||+        +.|+|+||+|+++|||++|+++|+|+|+.|+
T Consensus         2 ~r~~~l~~l~~~~~l~~-~v~-------~~~~~--~~~~ck--------~~~~i~dc~c~~~~i~nln~~~i~~~lq~l~   63 (469)
T KOG2608|consen    2 KRAIALLGLIAAVKLIS-VVN-------TQFAS--SICFCK--------VDGIIEDCTCDYETIDNLNNEVIYPLLQKLL   63 (469)
T ss_pred             chhHHHHHHHHHHHHHH-hcc-------ccccc--cceeee--------cccccccCCCCHHHHHHhhccccchHHHHHh
Confidence            34888887777777777 454       11222  689999        6799999999999999999999999999999


Q ss_pred             cCCcccEEeccCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CchhhccCCC-CcccccccchhhhcC
Q 017715          101 TTPFFRYFKAKLWCDCPFWPDDGMCRLRDCSVCECPENEFPEPFKKPFHILPS-DDLMCQEGKP-EATVDRTLDKRAFRG  178 (367)
Q Consensus       101 ~t~fFRyfKVNL~~~CPFW~dd~~C~~~~C~V~~c~e~eiPe~wr~~~~~~~~-~~~~c~~~~~-~~~vd~tl~~~~~~~  178 (367)
                      ++||||||||||+++||||+|+++|++++|+|++|+|+|||++|+++.+++++ .-..|.++++ ++.+|++++.++|..
T Consensus        64 ksdffryYkvnL~~~CpFW~Dd~~C~~r~C~V~~c~e~evPe~~k~~~~~~~~~~~~e~~~~~~~~~~~d~tl~dr~f~~  143 (469)
T KOG2608|consen   64 KSDFFRYYKVNLYRDCPFWPDDGMCLNRACSVEPCPEDEVPEGWKKSLGKYEPELCSECEDADSELGAKDRTLSDRAFLL  143 (469)
T ss_pred             cccchhheeccccCCCCCCCchhhhhhcCCccccCcccccchhhhhhhhccChhhhhhhhhccccccchhcccccccccc
Confidence            99999999999999999999999999999999999999999999986555554 2245555665 889999999899999


Q ss_pred             ccccCCC-CCCCCCCCCCCceEeeCCCCCCCCCCCCCCChhhhHHHHHhhcCCCCC------C------CCCC-------
Q 017715          179 WIETDNP-WTNDDETDNGEMTYVNLLLNPERYTGYTGPSARRIWDAVYTENCPKWM------A------IVPA-------  238 (367)
Q Consensus       179 w~~~D~~-~~~~De~~~~~~~YVDLl~NPERyTGY~G~~A~rIW~aIY~ENCF~~~------~------~~~C-------  238 (367)
                      |..+|+. ||..|+.++++++||||++||||||||+|++|+|||++||+||||++.      .      .++|       
T Consensus       144 w~~~d~~~~C~~dd~~s~~~~YVdLl~NPERyTGY~G~sa~rIW~sIYeeNCf~~~~~~~~~~~~~~~l~g~clEkrvfY  223 (469)
T KOG2608|consen  144 WDKHDDLSFCEVDDEESPEMVYVDLLLNPERYTGYKGPSAARIWRSIYEENCFKPDPLFDPNSIPYNWLEGLCLEKRVFY  223 (469)
T ss_pred             ccccCCccceeecCCCCCCcEEEehhcChhhhcCCCCCCHHHHHHHHHHhhCCCCCcccCCcccccchhccccHHHHHHH
Confidence            9999997 899888888999999999999999999999999999999999999875      1      4788       


Q ss_pred             -----cCCCCCCCCCCC----CCC-CCCCChHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHhhhhhhhcccCCCCccccH
Q 017715          239 -----NPQTRPNPPAKT----RPL-RWGKNPELMYDRVLRYQDRVRNLYFTFLFVLRAVTKATDYLEQAEYDTGNHEDDL  308 (367)
Q Consensus       239 -----LHaSIsiHl~~~----~~~-~W~pNl~~F~~Rv~~~PeRL~NLYF~YllvLRAl~Ka~p~L~~~~f~TG~~~eD~  308 (367)
                           |||||+||||++    .++ .||||+++|+.||++||+||+||||+|++|+|||.||+|||++.+|+||+..||+
T Consensus       224 rLISGlHsSIstHl~~~~y~~~e~~~WgpNl~~f~~Rf~~~P~Rl~NlYF~Yll~lrAl~Ki~pyl~~~~~~tgn~~eD~  303 (469)
T KOG2608|consen  224 RLISGLHSSISTHLCSFYYLLEETKRWGPNLDLFRARFGNGPDRLRNLYFTYLLVLRALGKIAPYLEELDFYTGNVEEDA  303 (469)
T ss_pred             HHHHHHHHHHHHHHhhhhcCCCcccccCcCHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhcchhhhhhhcccccccch
Confidence                 999999999995    444 6999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCccccccCCCCCCccccCCCC-CCCchHHHHHHhhhhhhhccCCc
Q 017715          309 KTVSLMKQLLYNPKLQAACPLPFDEAKLWQGQ-SGPELKQQIQEQFRNIRFRSEPE  363 (367)
Q Consensus       309 ~t~~lv~~Ll~~~~l~~scp~~FDE~~lF~~~-~a~~LKeeFr~~FrNISrIMD~~  363 (367)
                      +|+.+|.+|++.++   +||.||||+.||+|+ .|++||||||+|||||||||||-
T Consensus       304 e~k~~i~~il~~i~---~~p~hFdE~~~f~gd~~a~~lKe~fr~hFrnISrIMDCV  356 (469)
T KOG2608|consen  304 ETKSLLSDILSQIK---AFPKHFDEAELFAGDSEAPALKEEFRKHFRNISRIMDCV  356 (469)
T ss_pred             HHHHHHHHHHHHHh---hCccccchHhhhcccccchhHHHHHHHHHHHHHHHHhhc
Confidence            99999999999876   699999999999999 78999999999999999999995

>PF04137 ERO1: Endoplasmic Reticulum Oxidoreductin 1 (ERO1); InterPro: IPR007266 Members of this family are required for the formation of disulphide bonds in the endoplasmic reticulum [, ] Back     alignment and domain information
>COG5061 ERO1 Oxidoreductin, endoplasmic reticulum membrane-associated protein involved in disulfide bond formation [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query367
3ahq_A465 Hyperactive Human Ero1 Length = 465 7e-33
3ahr_A465 Inactive Human Ero1 Length = 465 1e-32
3nvj_A393 Crystal Structure Of The C143aC166A MUTANT OF ERO1P 1e-15
1rq1_A386 Structure Of Ero1p, Source Of Disulfide Bonds For O 2e-15
3m31_A388 Structure Of The C150aC295A MUTANT OF S. CEREVISIAE 3e-15
1rp4_A389 Structure Of Ero1p, Source Of Disulfide Bonds For O 5e-15
>pdb|3AHQ|A Chain A, Hyperactive Human Ero1 Length = 465 Back     alignment and structure 
Iteration: 1

 Score =  137 bits (346), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 158/349 (45%), Gaps = 66/349 (18%)
Query: 71  TGMVEDCCCDYETVDSVNGEVLHPLLQQLVTTPFFRYFKAKLWCDCPFWPDDGMCRLRDC 130
           +G ++DC CD ET+D  N   L P LQ+L+ + +FRY+K  L   CPFW D   C  RDC
Sbjct: 37  SGYLDDCTCDVETIDRFNNYRLFPRLQKLLESDYFRYYKVNLKRPCPFWNDISQCGRRDC 96
Query: 131 SVXXXXXXXX--XXXXXXXXHILPSDDLMCQEGKPE--ATVDRTLD---KRAFRGWIETD 183
           +V                  +   +++L+ +  + E    VD +L    ++A   W + D
Sbjct: 97  AVKPAQSDEVPDGIKSASYKYSEEANNLIEEAEQAERLGAVDESLSEETQKAVLQWTKHD 156
Query: 184 NPWTNDDETDN---GEMTYVNLLLNPERYTGYTGPSARRIWDAVYTENCPKWMAIV-PAN 239
           +   N  E D+    E  YV+LLLNPERYTGY GP A +IW+ +Y ENC K   I  P N
Sbjct: 157 DSSDNFAEADDIQSPEAEYVDLLLNPERYTGYKGPDAWKIWNVIYEENCFKPQTIKRPLN 216
Query: 240 P----------------------------------QTRPNPPAKTRPL--------RWGK 257
           P                                      N     R L        +WG 
Sbjct: 217 PLASGQGTSEENTFYSWLEGLCVEKRAFYRLISGLHASINVHLSARYLLQETWLEKKWGH 276
Query: 258 NP---ELMYDRVLRYQD---RVRNLYFTFLFVLRAVTKATDYLEQAEYD--TGNHEDDLK 309
           N    +  +D +L   +   R++NLYF +L  LRA++K   + E+ ++   TGN   D +
Sbjct: 277 NITEFQQRFDGILTEGEGPRRLKNLYFLYLIELRALSKVLPFFERPDFQLFTGNKIQDEE 336
Query: 310 TVSLMKQLLYNPKLQAACPLPFDEAKLWQG--QSGPELKQQIQEQFRNI 356
              L+ ++L+  K   + PL FDE   + G  +   +LK+  +  FRNI
Sbjct: 337 NKMLLLEILHEIK---SFPLHFDENSFFAGDKKEAHKLKEDFRLHFRNI 382
>pdb|3AHR|A Chain A, Inactive Human Ero1 Length = 465 Back     alignment and structure
>pdb|3NVJ|A Chain A, Crystal Structure Of The C143aC166A MUTANT OF ERO1P Length = 393 Back     alignment and structure
>pdb|1RQ1|A Chain A, Structure Of Ero1p, Source Of Disulfide Bonds For Oxidative Protein Folding In The Cell Length = 386 Back     alignment and structure
>pdb|3M31|A Chain A, Structure Of The C150aC295A MUTANT OF S. CEREVISIAE ERO1P Length = 388 Back     alignment and structure
>pdb|1RP4|A Chain A, Structure Of Ero1p, Source Of Disulfide Bonds For Oxidative Protein Folding In The Cell Length = 389 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query367
3ahq_A465 ERO1-like protein alpha; disulfide bond, PDI, redo 3e-97
3m31_A388 Endoplasmic oxidoreductin-1; disulfide mutant, dis 5e-84
>3ahq_A ERO1-like protein alpha; disulfide bond, PDI, redox, hyperactive human ERO1, oxidored; HET: FAD; 2.35A {Homo sapiens} PDB: 3ahr_A* Length = 465 Back     alignment and structure
 Score =  296 bits (757), Expect = 3e-97
 Identities = 102/368 (27%), Positives = 159/368 (43%), Gaps = 66/368 (17%)

Query: 52  ANNQTSCHCSSSSQDSVKYTGMVEDCCCDYETVDSVNGEVLHPLLQQLVTTPFFRYFKAK 111
            + +     +++ +   + +G ++DC CD ET+D  N   L P LQ+L+ + +FRY+K  
Sbjct: 18  RHGEEQPPETAAQRCFCQVSGYLDDCTCDVETIDRFNNYRLFPRLQKLLESDYFRYYKVN 77

Query: 112 LWCDCPFWPDDGMCRLRDCSVCECPENEFPEPFKKPFHILPSDDL----MCQEGKPEATV 167
           L   CPFW D   C  RDC+V     +E P+  K   +    +        ++ +    V
Sbjct: 78  LKRPCPFWNDISQCGRRDCAVKPAQSDEVPDGIKSASYKYSEEANNLIEEAEQAERLGAV 137

Query: 168 DRTLD---KRAFRGWIETDNPWTN---DDETDNGEMTYVNLLLNPERYTGYTGPSARRIW 221
           D +L    ++A   W + D+   N    D+  + E  YV+LLLNPERYTGY GP A +IW
Sbjct: 138 DESLSEETQKAVLQWTKHDDSSDNFAEADDIQSPEAEYVDLLLNPERYTGYKGPDAWKIW 197

Query: 222 DAVYTENCPKWMAI-VPANPQTRPNPPAKTRPL--------------------------- 253
           + +Y ENC K   I  P NP       ++                               
Sbjct: 198 NVIYEENCFKPQTIKRPLNPLASGQGTSEENTFYSWLEGLCVEKRAFYRLISGLHASINV 257

Query: 254 ---------------RWGKNPELMYDRVLR------YQDRVRNLYFTFLFVLRAVTKATD 292
                          +WG N      R            R++NLYF +L  LRA++K   
Sbjct: 258 HLSARYLLQETWLEKKWGHNITEFQQRFDGILTEGEGPRRLKNLYFLYLIELRALSKVLP 317

Query: 293 YLEQAEYD--TGNHEDDLKTVSLMKQLLYNPKLQAACPLPFDEAKLWQGQS--GPELKQQ 348
           + E+ ++   TGN   D +   L+ ++L+  K   + PL FDE   + G      +LK+ 
Sbjct: 318 FFERPDFQLFTGNKIQDEENKMLLLEILHEIK---SFPLHFDENSFFAGDKKEAHKLKED 374

Query: 349 IQEQFRNI 356
            +  FRNI
Sbjct: 375 FRLHFRNI 382
>3m31_A Endoplasmic oxidoreductin-1; disulfide mutant, disulfide bond, electron transport, endopl reticulum, FAD, flavoprotein, glycoprotein; HET: FAD; 1.85A {Saccharomyces cerevisiae} PDB: 1rp4_A* 1rq1_A* 3nvj_A* Length = 388 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query367
3ahq_A465 ERO1-like protein alpha; disulfide bond, PDI, redo 100.0
3m31_A388 Endoplasmic oxidoreductin-1; disulfide mutant, dis 100.0
>3ahq_A ERO1-like protein alpha; disulfide bond, PDI, redox, hyperactive human ERO1, oxidored; HET: FAD; 2.35A {Homo sapiens} PDB: 3ahr_A* Back     alignment and structure
Probab=100.00  E-value=8.3e-106  Score=814.22  Aligned_cols=300  Identities=33%  Similarity=0.612  Sum_probs=230.8

Q ss_pred             CCCCcccccCCCCCCccccccccCcccchHhHHhhhhhhhhHHHHhhhcCCcccEEeccCCCCCCCCCCCCCCCCCCCcc
Q 017715           53 NNQTSCHCSSSSQDSVKYTGMVEDCCCDYETVDSVNGEVLHPLLQQLVTTPFFRYFKAKLWCDCPFWPDDGMCRLRDCSV  132 (367)
Q Consensus        53 ~~~~~c~c~~~~~~~~~~~G~v~Dc~c~~etId~~N~~~l~p~L~~Lv~t~fFRyfKVNL~~~CPFW~dd~~C~~~~C~V  132 (367)
                      +..+.|||+        ++|+|+||||+|+|||++|+++|+|+|++|+++||||||||||+++||||+++++|++++|+|
T Consensus        27 ~~~~~c~c~--------~~g~v~Dc~c~~etId~~N~~~i~p~L~~L~~t~fFRyfkVnL~k~CPFW~d~~~C~~~~C~V   98 (465)
T 3ahq_A           27 TAAQRCFCQ--------VSGYLDDCTCDVETIDRFNNYRLFPRLQKLLESDYFRYYKVNLKRPCPFWNDISQCGRRDCAV   98 (465)
T ss_dssp             ----CEEEE--------CSSSSCEEECCHHHHHHHHHHTTHHHHHHHHHSHHHHEEEECCCCCCSSCC------------
T ss_pred             CCCCCcccC--------CCCccccCcCCHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCCCCCCCCccCCcCCCCCee
Confidence            557789999        999999999999999999997799999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCC----chhhccCCCCcccccccc---hhhhcCccccCCC---CCCCCCCCCCCceEeeC
Q 017715          133 CECPENEFPEPFKKPFHILPSD----DLMCQEGKPEATVDRTLD---KRAFRGWIETDNP---WTNDDETDNGEMTYVNL  202 (367)
Q Consensus       133 ~~c~e~eiPe~wr~~~~~~~~~----~~~c~~~~~~~~vd~tl~---~~~~~~w~~~D~~---~~~~De~~~~~~~YVDL  202 (367)
                      ++|+|+|||++||++..+++..    ...|+++..++.||++++   ..+|.+|.++|++   +|..|++++++++||||
T Consensus        99 ~~c~e~eiP~~wr~~~~~~~~~~~~~~~~c~~~~~lg~vd~tls~~~~~~~~~w~~~dd~~~~fC~~dDe~~~~~~YVdL  178 (465)
T 3ahq_A           99 KPAQSDEVPDGIKSASYKYSEEANNLIEEAEQAERLGAVDESLSEETQKAVLQWTKHDDSSDNFAEADDIQSPEAEYVDL  178 (465)
T ss_dssp             ------------------------------CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHTTCC-------CCSCEEEEG
T ss_pred             ecCCcccCChhhcccccccchhhccccccccccccccccccccchhhhhhhhccccccCcccccccccCCCCCCceEEec
Confidence            9999999999999865443321    125666666788999887   3578999988753   44444345689999999


Q ss_pred             CCCCCCCCCCCCCChhhhHHHHHhhcCCCCCC------------------------CCCC------------cCCCCCCC
Q 017715          203 LLNPERYTGYTGPSARRIWDAVYTENCPKWMA------------------------IVPA------------NPQTRPNP  246 (367)
Q Consensus       203 l~NPERyTGY~G~~A~rIW~aIY~ENCF~~~~------------------------~~~C------------LHaSIsiH  246 (367)
                      ++||||||||+|++|+|||++||+||||++.+                        +++|            ||||||||
T Consensus       179 l~NPEryTGY~G~~A~rIW~aIY~ENCF~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ClEkrvFyRLISGLHaSIs~H  258 (465)
T 3ahq_A          179 LLNPERYTGYKGPDAWKIWNVIYEENCFKPQTIKRPLNPLASGQGTSEENTFYSWLEGLCVEKRAFYRLISGLHASINVH  258 (465)
T ss_dssp             GGSCCCCCCCCHHHHHHHHHHHHTTCCBCC---------------------------CCCBCCHHHHHHHHHHHHHHHHH
T ss_pred             ccCcCcccCCCCCcHHHHHHHHHHHhccCccccccccCccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999998542                        5789            99999999


Q ss_pred             CCCC----C---CCCCCCChHHHHHHH------hhhhhhhhhHHHHHHHHHHHHHHhhhhhhhccc--CCCCccccHHHH
Q 017715          247 PAKT----R---PLRWGKNPELMYDRV------LRYQDRVRNLYFTFLFVLRAVTKATDYLEQAEY--DTGNHEDDLKTV  311 (367)
Q Consensus       247 l~~~----~---~~~W~pNl~~F~~Rv------~~~PeRL~NLYF~YllvLRAl~Ka~p~L~~~~f--~TG~~~eD~~t~  311 (367)
                      ||++    .   +|+|+||+++|++||      |+|||||+||||+|+||||||+||+|||.++.|  +|||..+|++|+
T Consensus       259 l~~~Yl~~~~~~~~~W~pNl~~F~~R~~~~~t~G~~PeRl~NLYF~Y~lvLRAl~K~~p~l~~~~y~~~tGn~~eD~~tk  338 (465)
T 3ahq_A          259 LSARYLLQETWLEKKWGHNITEFQQRFDGILTEGEGPRRLKNLYFLYLIELRALSKVLPFFERPDFQLFTGNKIQDEENK  338 (465)
T ss_dssp             HHHTEEEEECSSCEEEECCHHHHHHHHCHHHHTTHHHHHHHHHHHHHHHHHHHHHHTHHHHHSTTCCCCCSCSSHHHHHH
T ss_pred             HHHHHhccccccCCCcCCCHHHHHHHhccccccCCChHHHHhHHHHHHHHHHHHHHhhhhhhhccccccCCChhhhHHHH
Confidence            9998    3   899999999999997      579999999999999999999999999996666  999999999999


Q ss_pred             HHHHHHhcCccccccCCCCCCccccCCCC--CCCchHHHHHHhhhhhhhccCCc
Q 017715          312 SLMKQLLYNPKLQAACPLPFDEAKLWQGQ--SGPELKQQIQEQFRNIRFRSEPE  363 (367)
Q Consensus       312 ~lv~~Ll~~~~l~~scp~~FDE~~lF~~~--~a~~LKeeFr~~FrNISrIMD~~  363 (367)
                      ++|.+||+..   .+||.+|||+.||+|.  .+.+||+|||+|||||||||||-
T Consensus       339 ~~l~~ll~~~---~s~p~~FDE~~lF~~~~~~~~~LKeeFr~~FrNISrIMDCV  389 (465)
T 3ahq_A          339 MLLLEILHEI---KSFPLHFDENSFFAGDKKEAHKLKEDFRLHFRNISRIMDCV  389 (465)
T ss_dssp             HHHHHHHHHH---HHSCEEECTTCTTSCCTHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHH---HhCCCccChHhhcCCcchhHHHHHHHHHHHHHhHhHHhcCC
Confidence            9999999864   3799999999999984  67899999999999999999995
>3m31_A Endoplasmic oxidoreductin-1; disulfide mutant, disulfide bond, electron transport, endopl reticulum, FAD, flavoprotein, glycoprotein; HET: FAD; 1.85A {Saccharomyces cerevisiae} SCOP: a.227.1.1 PDB: 1rp4_A* 1rq1_A* 3nvj_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 367
d1rp4a_374 a.227.1.1 (A:) Endoplasmic oxidoreductin 1, Ero1p 7e-88
>d1rp4a_ a.227.1.1 (A:) Endoplasmic oxidoreductin 1, Ero1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 374 Back     information, alignment and structure

class: All alpha proteins
fold: ERO1-like
superfamily: ERO1-like
family: ERO1-like
domain: Endoplasmic oxidoreductin 1, Ero1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  267 bits (685), Expect = 7e-88
 Identities = 66/303 (21%), Positives = 125/303 (41%), Gaps = 42/303 (13%)

Query: 81  YETVDSVNGEVLHPLLQQLVTTPFFRYFKAKLWCDCPFW-PDDGMCRLRDCSVCECP-EN 138
           +  ++++N E +   L  L+ + FF+YF+  L+  C FW  +DG+C  R CSV      +
Sbjct: 3   FNELNAIN-ENIRDDLSALLKSDFFKYFRLDLYKQCSFWDANDGLCLNRACSVDVVEDWD 61

Query: 139 EFPEPFKKP-FHILPSDDLMCQEGKPEATVDRTLDKRAFRGWIETDNP--WTNDDETDNG 195
             PE ++        +D +   +   +         +  +  ++ ++   + + ++ +  
Sbjct: 62  TLPEYWQPEILGSFNNDTMKEADDSDDECKFLDQLCQTSKKPVDIEDTINYCDVNDFNGK 121

Query: 196 EMTYVNLLLNPERYTGYTGPSARRIWDAVYTENCPKWMAIVPANPQTRPNPPAKTRPL-- 253
               ++L  NPER+TGY G  A +IW  +Y +NC                  A  R +  
Sbjct: 122 NAVLIDLTANPERFTGYGGKQAGQIWSTIYQDNCFT-----IGETGESLAKDAFYRLVSG 176

Query: 254 -------------------RWGKNPELMYDRVLRYQDRVRNLYFTFLFVLRAVTKATDYL 294
                              +W  N +L   R+  + DRV N+YF +  V +A+ K   YL
Sbjct: 177 FHASIGTHLSKEYLNTKTGKWEPNLDLFMARIGNFPDRVTNMYFNYAVVAKALWKIQPYL 236

Query: 295 EQAEY-DTGNHEDDLKTVSLMKQLLYNPKLQAACPLPFDEAKLWQGQSGPELKQQIQEQF 353
            +  + D  N E   K  +++ QL             F+E  ++       LK + + +F
Sbjct: 237 PEFSFCDLVNKEIKNKMDNVISQL---------DTKIFNEDLVFANDLSLTLKDEFRSRF 287

Query: 354 RNI 356
           +N+
Sbjct: 288 KNV 290

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query367
d1rp4a_374 Endoplasmic oxidoreductin 1, Ero1p {Baker's yeast 100.0
>d1rp4a_ a.227.1.1 (A:) Endoplasmic oxidoreductin 1, Ero1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: All alpha proteins
fold: ERO1-like
superfamily: ERO1-like
family: ERO1-like
domain: Endoplasmic oxidoreductin 1, Ero1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3e-90  Score=682.59  Aligned_cols=274  Identities=22%  Similarity=0.455  Sum_probs=227.5

Q ss_pred             cchHhHHhhhhhhhhHHHHhhhcCCcccEEeccCCCCCCCCC-CCCCCCCCCCccccCCC-CCCCCCCCCCC-CCCCCCc
Q 017715           79 CDYETVDSVNGEVLHPLLQQLVTTPFFRYFKAKLWCDCPFWP-DDGMCRLRDCSVCECPE-NEFPEPFKKPF-HILPSDD  155 (367)
Q Consensus        79 c~~etId~~N~~~l~p~L~~Lv~t~fFRyfKVNL~~~CPFW~-dd~~C~~~~C~V~~c~e-~eiPe~wr~~~-~~~~~~~  155 (367)
                      .+|+|||++|++ |||+|++|+++||||||||||+++||||. ++++|++++|+|++|++ ++||+.||++. +++..+.
T Consensus         1 ~s~~~vd~~N~~-i~p~L~~L~~~dyFRyfkVnL~~~CPFW~~d~~~C~~~~C~V~~c~dee~iP~~~~~~~~~~~~~~~   79 (374)
T d1rp4a_           1 GSFNELNAINEN-IRDDLSALLKSDFFKYFRLDLYKQCSFWDANDGLCLNRACSVDVVEDWDTLPEYWQPEILGSFNNDT   79 (374)
T ss_dssp             CHHHHHHHHHHH-HHHHHHHHHTSTTTSEEEEESSCCCSSSCSSSSCCCTTTTBCCCSSCGGGSCGGGSHHHHTCCCTTT
T ss_pred             CCHHHHHHHHHH-HHHHHHHhcCCCceeeeecCCCCCCCCCCccccCcCCCCCCCccCCccccCccccccccccccccch
Confidence            379999999996 89999999999999999999999999995 67999999999999965 67999999754 3333221


Q ss_pred             hhhccCC-C-CcccccccchhhhcCccccCC--CCCCCCCCCCCCceEeeCCCCCCCCCCCCCCChhhhHHHHHhhcCCC
Q 017715          156 LMCQEGK-P-EATVDRTLDKRAFRGWIETDN--PWTNDDETDNGEMTYVNLLLNPERYTGYTGPSARRIWDAVYTENCPK  231 (367)
Q Consensus       156 ~~c~~~~-~-~~~vd~tl~~~~~~~w~~~D~--~~~~~De~~~~~~~YVDLl~NPERyTGY~G~~A~rIW~aIY~ENCF~  231 (367)
                      ....... . ....|..  ......|...|+  .||..|++++++++||||++||||||||+|++|+|||++||+||||+
T Consensus        80 ~~~~~~~~~~~~~~d~~--~~~~~~~~~~~~~~dfC~~dD~~~~~~~YVdLl~NPERyTGY~G~~a~~IW~~IY~ENCF~  157 (374)
T d1rp4a_          80 MKEADDSDDECKFLDQL--CQTSKKPVDIEDTINYCDVNDFNGKNAVLIDLTANPERFTGYGGKQAGQIWSTIYQDNCFT  157 (374)
T ss_dssp             CEECCTTCGGGSBHHHH--SSTTTSSCCSSSCCCHHHHTTCCCTTEEEEETTTSCCCCCCBCHHHHHHHHHHHHHTCCCC
T ss_pred             hhhccccccchhhcchh--hhhhccccccccccccccccccCCCCceEeehhhCcccccCCCCCcHHHHHHHHHHHhCCC
Confidence            1111000 0 0011110  012233433333  25555555678999999999999999999999999999999999999


Q ss_pred             CCCCCCC------------cCCCCCCCCCCC----CCCCCCCChHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHhhhhhh
Q 017715          232 WMAIVPA------------NPQTRPNPPAKT----RPLRWGKNPELMYDRVLRYQDRVRNLYFTFLFVLRAVTKATDYLE  295 (367)
Q Consensus       232 ~~~~~~C------------LHaSIsiHl~~~----~~~~W~pNl~~F~~Rv~~~PeRL~NLYF~YllvLRAl~Ka~p~L~  295 (367)
                      +...++|            ||||||||||++    .+|.|+||+++|++|||+||+||+||||+|++|||||+||+|||.
T Consensus       158 ~~~~~~c~ekrvfyrlISGlHsSIs~Hl~~~yl~~~~~~w~pN~~~f~~R~g~~p~rl~NLYF~y~~~LrAl~k~~~~l~  237 (374)
T d1rp4a_         158 IGETGESLAKDAFYRLVSGFHASIGTHLSKEYLNTKTGKWEPNLDLFMARIGNFPDRVTNMYFNYAVVAKALWKIQPYLP  237 (374)
T ss_dssp             TTSTTHHHHHHHHHHHHHHHHHHHHHHHHHSEEETTTTEEECCHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCcccchHHHHHHHHHHHHHHHHHHHHHHHhhccCCcCccCCCHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            8888999            999999999998    789999999999999999999999999999999999999999999


Q ss_pred             hcccCCCCccccHHHHHHHHHHhcCccccccCCCCCCccccCCCCCCCchHHHHHHhhhhhhhccCCc
Q 017715          296 QAEYDTGNHEDDLKTVSLMKQLLYNPKLQAACPLPFDEAKLWQGQSGPELKQQIQEQFRNIRFRSEPE  363 (367)
Q Consensus       296 ~~~f~TG~~~eD~~t~~lv~~Ll~~~~l~~scp~~FDE~~lF~~~~a~~LKeeFr~~FrNISrIMD~~  363 (367)
                      +++|+++.   |.+++..+..|++.     .+|.+|||+.||+++.+.+||+|||+|||||||||||-
T Consensus       238 ~~~~~~~~---~~~~~~~~~~l~~~-----~~~~~fde~~~f~~~~~~~lk~efr~~frnisriMDCV  297 (374)
T d1rp4a_         238 EFSFCDLV---NKEIKNKMDNVISQ-----LDTKIFNEDLVFANDLSLTLKDEFRSRFKNVTKIMDCV  297 (374)
T ss_dssp             CCSTTSST---TTTHHHHHHHHHHT-----TCCGGGGSCTTCTTTSCHHHHHHHHHHHHHHHHGGGGC
T ss_pred             hcCCCCCC---CHHHHHHHHHHHHH-----hccccCCHHHhcCCcchHHHHHHHHHHHHHHHHHHccc
Confidence            99998874   55566777888764     36789999999999999999999999999999999994